Query psy15539
Match_columns 333
No_of_seqs 272 out of 2975
Neff 10.5
Searched_HMMs 46136
Date Fri Aug 16 23:54:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15539.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15539hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01299 synapt_SV2 synaptic 100.0 8.7E-30 1.9E-34 241.5 27.9 263 65-332 163-472 (742)
2 KOG0569|consensus 100.0 6.1E-29 1.3E-33 222.5 26.1 268 66-333 8-298 (485)
3 KOG0254|consensus 100.0 1.6E-27 3.5E-32 221.7 26.4 267 66-333 42-323 (513)
4 TIGR00887 2A0109 phosphate:H+ 99.9 2.5E-26 5.4E-31 213.6 21.3 203 65-267 12-250 (502)
5 PRK10077 xylE D-xylose transpo 99.9 2.3E-24 4.9E-29 199.6 25.9 261 66-332 9-298 (479)
6 TIGR00898 2A0119 cation transp 99.9 2.6E-24 5.7E-29 200.4 22.3 223 90-315 110-338 (505)
7 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.8E-24 3.9E-29 196.1 19.0 178 67-247 6-194 (412)
8 TIGR00879 SP MFS transporter, 99.9 7.2E-24 1.6E-28 195.6 22.4 267 63-332 22-311 (481)
9 PF00083 Sugar_tr: Sugar (and 99.9 1.2E-28 2.6E-33 226.4 -13.0 258 75-333 6-281 (451)
10 COG2814 AraJ Arabinose efflux 99.9 2.4E-23 5.3E-28 181.4 20.5 175 66-243 10-189 (394)
11 PRK10642 proline/glycine betai 99.9 7.3E-23 1.6E-27 189.8 21.4 178 69-249 16-219 (490)
12 PRK10406 alpha-ketoglutarate t 99.9 1E-22 2.3E-27 185.9 21.0 179 66-247 19-223 (432)
13 COG2271 UhpC Sugar phosphate p 99.9 2.1E-23 4.6E-28 179.8 14.7 182 63-247 23-211 (448)
14 KOG0255|consensus 99.9 1.2E-22 2.7E-27 189.8 20.7 213 102-315 113-333 (521)
15 TIGR00891 2A0112 putative sial 99.9 2.7E-22 5.8E-27 181.5 21.7 182 65-249 8-195 (405)
16 PRK11663 regulatory protein Uh 99.9 1.5E-22 3.2E-27 185.0 19.3 177 69-248 23-204 (434)
17 TIGR00903 2A0129 major facilit 99.9 2E-22 4.2E-27 179.6 17.6 207 87-333 9-220 (368)
18 PRK03545 putative arabinose tr 99.9 7.4E-22 1.6E-26 178.0 20.6 176 67-245 7-187 (390)
19 PRK12307 putative sialic acid 99.9 9.8E-22 2.1E-26 179.3 20.1 177 67-246 16-196 (426)
20 TIGR00895 2A0115 benzoate tran 99.9 6.7E-22 1.4E-26 178.3 17.8 183 67-252 15-202 (398)
21 PRK10213 nepI ribonucleoside t 99.9 2.2E-21 4.9E-26 174.9 20.9 176 67-245 18-198 (394)
22 KOG0253|consensus 99.9 1.7E-21 3.7E-26 164.4 18.0 253 66-330 75-346 (528)
23 PRK14995 methyl viologen resis 99.9 3.1E-21 6.7E-26 179.1 21.6 178 66-246 3-186 (495)
24 TIGR00894 2A0114euk Na(+)-depe 99.9 8E-22 1.7E-26 181.9 16.2 181 67-247 17-224 (465)
25 PRK11551 putative 3-hydroxyphe 99.9 3.8E-21 8.3E-26 174.3 20.2 180 66-248 12-196 (406)
26 KOG2532|consensus 99.9 1.1E-21 2.4E-26 177.7 16.5 209 101-333 67-286 (466)
27 PRK15403 multidrug efflux syst 99.9 3.1E-21 6.7E-26 175.0 19.0 170 74-246 21-195 (413)
28 PRK09556 uhpT sugar phosphate 99.9 5.2E-22 1.1E-26 183.1 13.6 177 68-247 28-217 (467)
29 TIGR00893 2A0114 d-galactonate 99.9 2.2E-21 4.8E-26 174.5 15.2 161 83-246 8-173 (399)
30 PRK09952 shikimate transporter 99.9 1.9E-20 4.1E-25 171.2 21.3 178 68-248 21-225 (438)
31 KOG2533|consensus 99.9 1.1E-20 2.3E-25 171.8 17.4 215 102-333 76-301 (495)
32 PRK11273 glpT sn-glycerol-3-ph 99.9 2.4E-20 5.3E-25 171.3 19.8 173 72-248 32-214 (452)
33 KOG1330|consensus 99.9 6.9E-23 1.5E-27 178.2 2.0 177 67-246 31-213 (493)
34 TIGR00710 efflux_Bcr_CflA drug 99.9 1.3E-20 2.8E-25 169.4 16.8 165 79-246 15-184 (385)
35 PRK15075 citrate-proton sympor 99.9 4.1E-20 9E-25 168.9 19.3 160 69-231 15-200 (434)
36 PF07690 MFS_1: Major Facilita 99.9 1.2E-20 2.6E-25 167.4 15.2 167 77-246 4-176 (352)
37 TIGR00806 rfc RFC reduced fola 99.9 5.6E-20 1.2E-24 163.1 18.9 159 85-247 42-207 (511)
38 PRK10091 MFS transport protein 99.9 4.4E-20 9.6E-25 166.0 18.5 171 72-245 6-181 (382)
39 TIGR00711 efflux_EmrB drug res 99.8 5.2E-20 1.1E-24 170.7 18.8 173 71-246 4-181 (485)
40 PRK03699 putative transporter; 99.8 7.5E-20 1.6E-24 165.2 19.1 169 68-239 6-179 (394)
41 PRK09705 cynX putative cyanate 99.8 6.3E-20 1.4E-24 165.5 18.2 147 85-235 25-176 (393)
42 KOG0252|consensus 99.8 1.1E-20 2.3E-25 164.1 11.9 190 61-250 33-253 (538)
43 PLN00028 nitrate transmembrane 99.8 1.1E-19 2.4E-24 167.8 19.4 162 78-243 45-219 (476)
44 PRK15034 nitrate/nitrite trans 99.8 1.2E-19 2.7E-24 163.5 18.9 200 86-332 51-279 (462)
45 TIGR00900 2A0121 H+ Antiporter 99.8 9.6E-20 2.1E-24 162.3 18.2 159 79-240 9-176 (365)
46 TIGR00805 oat sodium-independe 99.8 1.1E-20 2.4E-25 178.9 12.3 167 76-245 40-283 (633)
47 PRK15402 multidrug efflux syst 99.8 2.5E-19 5.5E-24 162.4 20.7 179 65-246 9-192 (406)
48 PRK03893 putative sialic acid 99.8 5.3E-19 1.2E-23 164.5 22.7 180 66-248 17-200 (496)
49 TIGR00881 2A0104 phosphoglycer 99.8 7.8E-21 1.7E-25 170.2 9.2 165 80-247 6-176 (379)
50 PRK11652 emrD multidrug resist 99.8 1.9E-19 4.1E-24 162.6 18.2 164 80-246 19-187 (394)
51 TIGR00712 glpT glycerol-3-phos 99.8 1.3E-19 2.8E-24 165.8 17.2 172 72-247 30-211 (438)
52 PRK11043 putative transporter; 99.8 3.3E-19 7.2E-24 161.4 19.5 160 83-245 20-183 (401)
53 TIGR00885 fucP L-fucose:H+ sym 99.8 4.7E-19 1E-23 160.4 19.3 166 71-239 5-203 (410)
54 PRK10473 multidrug efflux syst 99.8 3.6E-19 7.8E-24 160.7 18.2 159 85-246 19-182 (392)
55 TIGR00890 2A0111 Oxalate/Forma 99.8 1.1E-19 2.3E-24 162.7 14.7 157 85-245 19-180 (377)
56 PRK11195 lysophospholipid tran 99.8 1.4E-18 2.9E-23 156.8 20.8 149 92-246 26-177 (393)
57 PRK10133 L-fucose transporter; 99.8 1.9E-18 4.2E-23 157.7 20.6 148 67-217 24-174 (438)
58 TIGR00886 2A0108 nitrite extru 99.8 5.9E-19 1.3E-23 157.7 16.6 159 84-246 16-192 (366)
59 PRK11102 bicyclomycin/multidru 99.8 4.6E-19 1E-23 159.1 15.3 159 85-246 7-170 (377)
60 PRK10504 putative transporter; 99.8 6E-18 1.3E-22 156.4 23.0 171 72-245 13-188 (471)
61 PRK03633 putative MFS family t 99.8 3.2E-18 7E-23 153.8 19.8 146 71-219 8-153 (381)
62 PRK10642 proline/glycine betai 99.8 1.8E-18 3.8E-23 160.5 17.1 187 89-281 270-470 (490)
63 PRK05122 major facilitator sup 99.8 2.6E-18 5.6E-23 155.4 17.8 158 76-236 22-192 (399)
64 PRK12382 putative transporter; 99.8 5.6E-18 1.2E-22 152.9 18.7 145 84-231 30-187 (392)
65 TIGR00892 2A0113 monocarboxyla 99.8 1.9E-18 4.2E-23 158.7 14.9 170 68-241 18-192 (455)
66 PRK11646 multidrug resistance 99.8 7.5E-18 1.6E-22 152.3 18.3 156 86-244 27-187 (400)
67 PRK10054 putative transporter; 99.8 9.3E-18 2E-22 151.5 17.8 162 82-245 20-185 (395)
68 PRK09874 drug efflux system pr 99.8 2.9E-17 6.2E-22 149.0 20.0 165 77-245 22-196 (408)
69 TIGR00897 2A0118 polyol permea 99.8 1.8E-17 3.8E-22 150.1 18.1 134 90-226 34-176 (402)
70 TIGR00896 CynX cyanate transpo 99.8 1.4E-17 3E-22 148.3 16.3 143 86-233 17-165 (355)
71 PRK10489 enterobactin exporter 99.8 8.3E-18 1.8E-22 153.0 14.8 159 85-246 33-200 (417)
72 PTZ00207 hypothetical protein; 99.8 6E-17 1.3E-21 150.1 20.5 173 66-244 25-207 (591)
73 TIGR00899 2A0120 sugar efflux 99.8 4E-17 8.6E-22 146.3 18.4 167 78-247 6-181 (375)
74 cd06174 MFS The Major Facilita 99.8 3.9E-17 8.5E-22 144.5 17.4 165 76-243 6-174 (352)
75 TIGR00883 2A0106 metabolite-pr 99.8 4.8E-17 1E-21 146.4 17.7 143 104-246 27-194 (394)
76 COG2223 NarK Nitrate/nitrite t 99.7 5.7E-17 1.2E-21 140.4 16.6 203 88-333 33-246 (417)
77 PF06609 TRI12: Fungal trichot 99.7 1.2E-16 2.7E-21 147.2 16.2 146 88-238 63-212 (599)
78 COG0738 FucP Fucose permease [ 99.7 7.4E-16 1.6E-20 132.8 18.0 167 71-240 15-207 (422)
79 PRK11010 ampG muropeptide tran 99.7 9.9E-16 2.1E-20 141.9 19.6 170 72-246 15-198 (491)
80 KOG2615|consensus 99.7 2.4E-16 5.3E-21 134.2 14.0 117 102-219 63-179 (451)
81 PRK10207 dipeptide/tripeptide 99.7 2.5E-16 5.5E-21 145.3 15.2 165 76-242 21-193 (489)
82 PRK11902 ampG muropeptide tran 99.7 7.9E-16 1.7E-20 139.4 17.5 166 76-246 6-185 (402)
83 TIGR00924 yjdL_sub1_fam amino 99.7 3.8E-16 8.3E-21 144.0 15.3 165 77-241 18-190 (475)
84 KOG2504|consensus 99.7 2.1E-16 4.6E-21 145.2 10.0 171 66-240 43-218 (509)
85 KOG3764|consensus 99.7 1.8E-16 4E-21 135.7 8.5 142 101-242 100-246 (464)
86 TIGR00902 2A0127 phenyl propri 99.7 2.6E-15 5.7E-20 135.0 16.0 153 76-233 11-169 (382)
87 PRK11128 putative 3-phenylprop 99.7 2.9E-15 6.2E-20 134.8 16.2 155 83-244 18-180 (382)
88 TIGR00882 2A0105 oligosacchari 99.7 4.5E-15 9.7E-20 134.2 17.2 155 83-241 16-181 (396)
89 PRK08633 2-acyl-glycerophospho 99.7 6.6E-15 1.4E-19 150.3 20.1 113 107-219 47-162 (1146)
90 TIGR00901 2A0125 AmpG-related 99.7 6.4E-15 1.4E-19 131.2 17.5 156 85-245 4-181 (356)
91 PRK06814 acylglycerophosphoeth 99.7 8.6E-15 1.9E-19 149.2 20.3 140 107-246 52-198 (1140)
92 TIGR01299 synapt_SV2 synaptic 99.6 7.8E-15 1.7E-19 140.1 15.6 138 109-246 597-737 (742)
93 PRK15011 sugar efflux transpor 99.6 4.9E-14 1.1E-18 127.3 19.9 162 82-246 28-198 (393)
94 TIGR01301 GPH_sucrose GPH fami 99.6 4.7E-14 1E-18 128.3 17.7 160 84-246 19-222 (477)
95 TIGR00880 2_A_01_02 Multidrug 99.6 8.8E-15 1.9E-19 111.8 10.9 132 113-244 4-140 (141)
96 PRK15462 dipeptide/tripeptide 99.6 2.4E-14 5.2E-19 130.8 15.3 155 83-239 23-185 (493)
97 PRK09584 tppB putative tripept 99.6 2.3E-14 5.1E-19 132.9 15.5 151 83-235 35-193 (500)
98 PRK09528 lacY galactoside perm 99.6 3.9E-14 8.4E-19 129.1 14.7 155 86-242 27-190 (420)
99 PRK15011 sugar efflux transpor 99.6 1.7E-13 3.8E-18 123.7 17.4 152 90-244 237-392 (393)
100 PRK11551 putative 3-hydroxyphe 99.6 1.6E-13 3.4E-18 124.5 16.4 149 91-242 242-395 (406)
101 TIGR00890 2A0111 Oxalate/Forma 99.5 1.1E-13 2.5E-18 123.7 14.0 141 92-235 228-374 (377)
102 TIGR00792 gph sugar (Glycoside 99.5 1E-13 2.2E-18 126.9 13.5 151 92-245 23-197 (437)
103 PRK09528 lacY galactoside perm 99.5 8.6E-14 1.9E-18 126.8 12.8 144 102-245 257-406 (420)
104 COG2807 CynX Cyanate permease 99.5 9.4E-13 2E-17 112.2 17.6 220 68-332 11-235 (395)
105 PRK05122 major facilitator sup 99.5 5.5E-13 1.2E-17 120.7 17.2 149 91-244 238-390 (399)
106 TIGR00889 2A0110 nucleoside tr 99.5 1.4E-13 3.1E-18 125.1 13.0 140 106-245 250-405 (418)
107 cd06174 MFS The Major Facilita 99.5 4.6E-13 9.9E-18 118.4 15.8 153 87-241 193-350 (352)
108 PRK09952 shikimate transporter 99.5 1.6E-12 3.4E-17 119.2 17.5 153 91-245 272-435 (438)
109 TIGR00899 2A0120 sugar efflux 99.5 2E-12 4.4E-17 115.8 16.7 149 92-243 222-374 (375)
110 PRK12382 putative transporter; 99.5 2.4E-12 5.2E-17 116.3 16.6 145 91-240 238-386 (392)
111 TIGR00889 2A0110 nucleoside tr 99.5 2E-12 4.4E-17 117.6 15.6 152 85-246 18-183 (418)
112 TIGR00902 2A0127 phenyl propri 99.5 5.8E-12 1.3E-16 113.3 18.0 145 90-239 226-375 (382)
113 PF03137 OATP: Organic Anion T 99.5 8.8E-15 1.9E-19 135.6 -0.3 244 80-333 14-333 (539)
114 TIGR02718 sider_RhtX_FptX side 99.4 8.6E-12 1.9E-16 112.6 18.2 171 71-244 3-185 (390)
115 PRK09874 drug efflux system pr 99.4 1.3E-12 2.9E-17 118.5 12.9 132 109-240 260-395 (408)
116 PRK09556 uhpT sugar phosphate 99.4 4.5E-12 9.7E-17 117.1 16.5 151 88-240 277-446 (467)
117 KOG3626|consensus 99.4 6.8E-13 1.5E-17 123.7 10.8 248 70-333 98-420 (735)
118 TIGR00879 SP MFS transporter, 99.4 3.8E-12 8.2E-17 117.5 15.6 157 87-246 302-474 (481)
119 TIGR00893 2A0114 d-galactonate 99.4 5.5E-12 1.2E-16 113.3 16.0 150 87-239 233-395 (399)
120 TIGR00897 2A0118 polyol permea 99.4 9.3E-12 2E-16 112.8 17.0 148 90-242 243-400 (402)
121 PRK10489 enterobactin exporter 99.4 8.2E-12 1.8E-16 113.7 16.6 154 91-246 245-403 (417)
122 TIGR00883 2A0106 metabolite-pr 99.4 3E-12 6.5E-17 115.2 13.5 143 88-232 238-390 (394)
123 KOG2325|consensus 99.4 5.6E-12 1.2E-16 113.1 14.9 178 67-247 32-234 (488)
124 PRK03633 putative MFS family t 99.4 1E-11 2.2E-16 111.7 16.8 144 91-240 222-369 (381)
125 PRK10077 xylE D-xylose transpo 99.4 2.3E-11 5E-16 112.8 19.0 154 90-246 292-461 (479)
126 KOG0569|consensus 99.4 5E-11 1.1E-15 107.7 19.9 156 87-246 288-458 (485)
127 TIGR00892 2A0113 monocarboxyla 99.4 2.9E-12 6.4E-17 117.8 12.3 145 90-237 262-415 (455)
128 TIGR00887 2A0109 phosphate:H+ 99.4 8.8E-12 1.9E-16 116.2 15.6 134 114-247 342-493 (502)
129 PRK03699 putative transporter; 99.4 6.2E-12 1.3E-16 113.7 14.0 152 89-243 225-380 (394)
130 PRK03545 putative arabinose tr 99.4 3.1E-11 6.8E-16 108.9 17.8 137 102-240 236-377 (390)
131 PF05977 MFS_3: Transmembrane 99.4 2.8E-11 6.1E-16 112.0 17.7 147 92-241 33-188 (524)
132 TIGR00891 2A0112 putative sial 99.4 5.7E-12 1.2E-16 113.9 12.9 127 91-219 260-387 (405)
133 TIGR00898 2A0119 cation transp 99.4 2.8E-11 6.1E-16 113.0 17.3 136 111-246 359-498 (505)
134 PF11700 ATG22: Vacuole efflux 99.4 4.3E-11 9.3E-16 109.7 17.4 155 89-245 301-470 (477)
135 TIGR00895 2A0115 benzoate tran 99.4 1.7E-11 3.8E-16 110.4 14.6 127 90-219 271-397 (398)
136 PRK10406 alpha-ketoglutarate t 99.4 3.2E-11 7E-16 110.3 16.4 152 90-243 264-424 (432)
137 PRK09669 putative symporter Ya 99.4 1.4E-11 3.1E-16 113.1 14.1 143 102-244 40-206 (444)
138 PRK09705 cynX putative cyanate 99.3 3.4E-11 7.4E-16 108.8 16.0 152 90-246 226-385 (393)
139 PRK11273 glpT sn-glycerol-3-ph 99.3 5.3E-11 1.1E-15 109.6 17.0 150 89-240 273-432 (452)
140 PRK03893 putative sialic acid 99.3 2.9E-11 6.4E-16 112.6 15.2 141 90-232 296-442 (496)
141 PRK10504 putative transporter; 99.3 4E-11 8.7E-16 111.0 15.9 128 90-219 282-412 (471)
142 PRK12307 putative sialic acid 99.3 7.9E-11 1.7E-15 107.5 17.1 127 90-219 252-380 (426)
143 PF05977 MFS_3: Transmembrane 99.3 5.7E-11 1.2E-15 110.0 15.9 145 90-236 239-387 (524)
144 TIGR00900 2A0121 H+ Antiporter 99.3 2.9E-11 6.2E-16 107.7 13.4 127 91-219 233-360 (365)
145 PRK11128 putative 3-phenylprop 99.3 1.5E-10 3.2E-15 104.3 17.3 139 91-234 227-370 (382)
146 PLN00028 nitrate transmembrane 99.3 2.4E-11 5.3E-16 112.4 12.1 149 92-243 275-433 (476)
147 TIGR00882 2A0105 oligosacchari 99.3 1.2E-10 2.5E-15 105.4 16.0 135 103-237 250-389 (396)
148 PRK11663 regulatory protein Uh 99.3 9.4E-11 2E-15 107.3 15.3 151 88-240 262-421 (434)
149 TIGR00792 gph sugar (Glycoside 99.3 1.4E-10 3E-15 106.2 15.9 115 105-219 255-377 (437)
150 PRK15075 citrate-proton sympor 99.3 3E-10 6.5E-15 104.0 17.5 130 88-219 257-391 (434)
151 PF13347 MFS_2: MFS/sugar tran 99.3 3.6E-11 7.7E-16 109.9 10.7 150 92-244 25-200 (428)
152 PRK11010 ampG muropeptide tran 99.2 3.7E-10 8.1E-15 104.8 16.7 143 102-244 253-404 (491)
153 TIGR01272 gluP glucose/galacto 99.2 4.7E-10 1E-14 97.8 16.2 138 87-227 158-299 (310)
154 PRK10429 melibiose:sodium symp 99.2 2.2E-10 4.8E-15 106.0 15.0 159 85-245 22-204 (473)
155 PF05631 DUF791: Protein of un 99.2 8.2E-10 1.8E-14 95.0 17.0 143 102-245 64-219 (354)
156 TIGR00788 fbt folate/biopterin 99.2 3.8E-10 8.2E-15 104.1 15.9 169 72-246 29-212 (468)
157 TIGR02718 sider_RhtX_FptX side 99.2 5.6E-10 1.2E-14 100.8 16.1 143 92-237 231-385 (390)
158 KOG2563|consensus 99.2 2.2E-09 4.7E-14 94.4 18.4 154 62-219 38-199 (480)
159 TIGR00881 2A0104 phosphoglycer 99.2 1.7E-10 3.7E-15 103.2 11.8 128 90-219 237-369 (379)
160 PRK08633 2-acyl-glycerophospho 99.2 4.5E-10 9.8E-15 115.0 16.4 127 91-219 254-381 (1146)
161 PF03825 Nuc_H_symport: Nucleo 99.2 8.1E-10 1.8E-14 99.3 15.9 161 83-246 16-183 (400)
162 COG2814 AraJ Arabinose efflux 99.2 1.8E-09 3.9E-14 95.0 17.1 150 86-240 229-383 (394)
163 KOG2504|consensus 99.2 2.2E-10 4.7E-15 105.7 12.0 156 85-243 314-476 (509)
164 COG2271 UhpC Sugar phosphate p 99.2 2.1E-10 4.4E-15 100.1 10.8 167 70-238 253-429 (448)
165 PRK09848 glucuronide transport 99.2 1.2E-09 2.7E-14 100.4 16.6 126 92-219 251-385 (448)
166 KOG0253|consensus 99.2 4.6E-10 1E-14 96.0 12.4 129 115-243 389-519 (528)
167 PF06813 Nodulin-like: Nodulin 99.2 1.2E-09 2.6E-14 90.9 14.4 146 68-219 2-154 (250)
168 PRK15402 multidrug efflux syst 99.2 1.1E-09 2.3E-14 99.5 15.5 125 92-219 238-367 (406)
169 COG2270 Permeases of the major 99.2 4.3E-10 9.4E-15 98.2 12.1 144 102-245 283-431 (438)
170 TIGR00711 efflux_EmrB drug res 99.2 4.5E-10 9.8E-15 104.3 13.0 128 90-219 276-407 (485)
171 TIGR00712 glpT glycerol-3-phos 99.1 4E-10 8.6E-15 103.4 12.2 154 90-245 272-436 (438)
172 TIGR00901 2A0125 AmpG-related 99.1 3.8E-10 8.2E-15 100.5 11.2 114 89-205 229-354 (356)
173 PRK11462 putative transporter; 99.1 2.6E-09 5.6E-14 98.4 16.4 135 102-236 40-197 (460)
174 TIGR00894 2A0114euk Na(+)-depe 99.1 1.4E-09 2.9E-14 100.6 14.7 153 87-242 279-449 (465)
175 TIGR00710 efflux_Bcr_CflA drug 99.1 3.8E-09 8.3E-14 94.9 17.0 122 92-216 229-356 (385)
176 PRK11646 multidrug resistance 99.1 2.1E-09 4.5E-14 97.4 15.2 126 91-219 230-356 (400)
177 TIGR02332 HpaX 4-hydroxyphenyl 99.1 8.7E-10 1.9E-14 100.2 12.8 143 88-231 261-409 (412)
178 PRK10054 putative transporter; 99.1 1.8E-09 4E-14 97.5 14.6 132 102-234 239-375 (395)
179 PRK10213 nepI ribonucleoside t 99.1 6E-09 1.3E-13 94.2 17.7 139 92-234 240-382 (394)
180 COG3104 PTR2 Dipeptide/tripept 99.1 3.4E-10 7.4E-15 100.9 9.2 142 102-243 56-206 (498)
181 PRK10091 MFS transport protein 99.1 3.8E-09 8.3E-14 95.1 16.1 141 93-238 224-371 (382)
182 TIGR00903 2A0129 major facilit 99.1 3.2E-09 7E-14 94.9 15.4 149 89-244 212-366 (368)
183 PRK14995 methyl viologen resis 99.1 1.3E-09 2.8E-14 101.5 13.3 127 91-219 281-410 (495)
184 PRK06814 acylglycerophosphoeth 99.1 1.3E-09 2.8E-14 111.6 14.2 127 91-219 247-393 (1140)
185 PF13347 MFS_2: MFS/sugar tran 99.1 3.6E-09 7.8E-14 96.8 15.6 128 89-219 245-381 (428)
186 PF07690 MFS_1: Major Facilita 99.1 9.8E-10 2.1E-14 97.3 11.6 123 88-213 225-352 (352)
187 PF03825 Nuc_H_symport: Nucleo 99.1 6.3E-09 1.4E-13 93.6 16.5 156 86-244 224-397 (400)
188 TIGR00896 CynX cyanate transpo 99.1 3.4E-09 7.3E-14 94.4 14.5 126 90-219 218-345 (355)
189 PRK11902 ampG muropeptide tran 99.1 5.2E-09 1.1E-13 94.9 15.8 146 93-241 234-388 (402)
190 PRK09848 glucuronide transport 99.1 4.4E-09 9.6E-14 96.8 14.9 116 102-217 39-172 (448)
191 PRK11195 lysophospholipid tran 99.1 6.8E-09 1.5E-13 93.8 15.6 129 102-231 236-370 (393)
192 PRK10429 melibiose:sodium symp 99.0 3.3E-08 7.2E-13 91.6 20.0 115 105-219 264-390 (473)
193 PF01306 LacY_symp: LacY proto 99.0 1.7E-09 3.7E-14 96.1 10.7 152 85-240 23-185 (412)
194 PF01306 LacY_symp: LacY proto 99.0 1.1E-08 2.3E-13 91.0 15.2 143 102-244 254-402 (412)
195 PRK11102 bicyclomycin/multidru 99.0 1.9E-08 4.2E-13 90.2 17.1 116 102-218 225-345 (377)
196 PRK10473 multidrug efflux syst 99.0 1.8E-08 3.8E-13 91.1 16.1 127 102-230 234-361 (392)
197 PRK09669 putative symporter Ya 99.0 6.3E-08 1.4E-12 89.0 19.3 112 108-219 265-385 (444)
198 KOG4686|consensus 99.0 6E-09 1.3E-13 86.2 10.7 143 95-242 291-442 (459)
199 COG2211 MelB Na+/melibiose sym 99.0 2.7E-08 5.9E-13 89.5 15.7 155 89-245 32-210 (467)
200 PRK10133 L-fucose transporter; 99.0 2.8E-08 6E-13 91.1 15.5 115 102-219 290-404 (438)
201 COG2223 NarK Nitrate/nitrite t 98.9 1.2E-08 2.6E-13 89.2 11.5 144 90-240 239-398 (417)
202 PF01770 Folate_carrier: Reduc 98.9 2.6E-08 5.6E-13 88.2 12.8 145 102-247 35-186 (412)
203 PRK15034 nitrate/nitrite trans 98.9 4.4E-08 9.6E-13 89.1 14.2 146 91-240 274-451 (462)
204 PRK09584 tppB putative tripept 98.9 1.7E-07 3.6E-12 87.4 17.6 126 109-234 318-470 (500)
205 PRK11043 putative transporter; 98.9 2.5E-07 5.4E-12 83.8 17.9 124 92-219 226-354 (401)
206 KOG2532|consensus 98.9 1.6E-08 3.5E-13 92.3 10.1 168 68-242 257-446 (466)
207 COG2211 MelB Na+/melibiose sym 98.8 3.4E-07 7.4E-12 82.5 17.8 128 90-219 257-393 (467)
208 KOG0252|consensus 98.8 3.5E-09 7.5E-14 93.2 5.0 176 69-247 304-502 (538)
209 COG0477 ProP Permeases of the 98.8 1.9E-07 4.1E-12 80.4 15.6 144 86-232 19-174 (338)
210 KOG0254|consensus 98.8 4.3E-07 9.4E-12 85.0 18.8 161 83-247 309-488 (513)
211 TIGR00924 yjdL_sub1_fam amino 98.8 3E-07 6.4E-12 85.2 16.6 130 109-238 314-463 (475)
212 PF00083 Sugar_tr: Sugar (and 98.8 4.1E-11 9E-16 110.2 -8.9 153 90-247 274-441 (451)
213 PRK11652 emrD multidrug resist 98.8 2.6E-07 5.7E-12 83.5 14.9 117 102-219 238-357 (394)
214 TIGR00788 fbt folate/biopterin 98.7 1.4E-07 3.1E-12 87.1 12.7 119 101-219 282-410 (468)
215 PRK11462 putative transporter; 98.7 1.4E-06 3E-11 80.4 19.0 113 107-219 263-384 (460)
216 KOG4686|consensus 98.7 1.7E-08 3.6E-13 83.6 5.1 152 65-219 40-195 (459)
217 TIGR00886 2A0108 nitrite extru 98.7 5.4E-08 1.2E-12 86.9 8.8 115 91-208 247-365 (366)
218 COG2807 CynX Cyanate permease 98.7 1.3E-06 2.8E-11 75.2 16.2 166 66-239 209-381 (395)
219 PF06609 TRI12: Fungal trichot 98.7 1.5E-06 3.2E-11 81.2 16.7 138 76-215 317-460 (599)
220 TIGR00926 2A1704 Peptide:H+ sy 98.7 4.4E-06 9.5E-11 79.6 20.1 139 102-240 18-179 (654)
221 TIGR00885 fucP L-fucose:H+ sym 98.6 1.2E-06 2.7E-11 79.5 15.8 126 90-219 253-378 (410)
222 PRK10207 dipeptide/tripeptide 98.6 1.7E-06 3.6E-11 80.4 16.1 110 109-218 311-437 (489)
223 TIGR01272 gluP glucose/galacto 98.6 5E-07 1.1E-11 78.8 11.1 86 156-241 6-111 (310)
224 PF11700 ATG22: Vacuole efflux 98.6 1.1E-05 2.5E-10 74.3 20.1 140 108-247 71-252 (477)
225 PF03209 PUCC: PUCC protein; 98.6 1.2E-05 2.5E-10 70.9 18.9 119 101-219 238-360 (403)
226 KOG3762|consensus 98.6 2.2E-07 4.8E-12 83.6 8.1 158 80-240 382-544 (618)
227 PF06779 DUF1228: Protein of u 98.6 3.5E-07 7.5E-12 62.1 7.1 80 81-163 4-83 (85)
228 PF03209 PUCC: PUCC protein; 98.6 4.5E-06 9.7E-11 73.5 15.9 117 102-219 10-148 (403)
229 KOG3764|consensus 98.5 1.7E-07 3.6E-12 81.4 6.7 154 81-236 282-447 (464)
230 KOG2816|consensus 98.5 5.1E-06 1.1E-10 75.9 15.0 127 115-246 70-203 (463)
231 TIGR01301 GPH_sucrose GPH fami 98.5 7.5E-06 1.6E-10 75.1 15.9 136 111-246 309-475 (477)
232 PF05978 UNC-93: Ion channel r 98.5 1E-05 2.2E-10 62.4 14.0 114 104-218 34-147 (156)
233 PF03092 BT1: BT1 family; Int 98.4 2.3E-06 5.1E-11 78.1 11.0 147 92-242 13-174 (433)
234 PRK15403 multidrug efflux syst 98.4 2.7E-05 5.9E-10 70.9 17.8 126 91-219 240-370 (413)
235 COG0738 FucP Fucose permease [ 98.3 1.2E-05 2.7E-10 70.3 13.1 131 84-219 251-381 (422)
236 PF12832 MFS_1_like: MFS_1 lik 98.3 2.5E-06 5.4E-11 57.4 6.7 64 81-147 12-75 (77)
237 KOG0255|consensus 98.3 3.6E-05 7.7E-10 72.4 16.7 137 111-247 354-497 (521)
238 KOG2533|consensus 98.2 2.6E-05 5.6E-10 71.8 12.5 140 74-215 278-423 (495)
239 TIGR00769 AAA ADP/ATP carrier 98.2 0.00041 8.8E-09 63.6 20.0 113 107-219 43-188 (472)
240 KOG0637|consensus 98.1 3.5E-06 7.6E-11 74.7 5.6 129 91-222 54-205 (498)
241 PRK15462 dipeptide/tripeptide 98.0 0.00042 9.1E-09 64.1 17.1 111 109-219 310-437 (493)
242 KOG2615|consensus 98.0 0.00011 2.4E-09 64.0 12.2 119 101-219 291-411 (451)
243 PTZ00207 hypothetical protein; 98.0 0.00019 4.1E-09 67.6 14.4 126 112-239 396-548 (591)
244 KOG2816|consensus 97.9 0.00053 1.1E-08 62.9 15.0 118 101-219 271-389 (463)
245 PF02487 CLN3: CLN3 protein; 97.9 0.00072 1.6E-08 60.3 14.7 110 106-219 280-394 (402)
246 KOG3574|consensus 97.8 0.0013 2.7E-08 57.5 14.5 139 71-215 33-188 (510)
247 KOG3098|consensus 97.8 0.0019 4.2E-08 58.7 15.9 102 113-215 56-157 (461)
248 PF06963 FPN1: Ferroportin1 (F 97.6 0.0014 3E-08 59.4 13.4 129 88-219 277-415 (432)
249 COG2270 Permeases of the major 97.6 0.0034 7.5E-08 55.7 14.9 105 107-211 58-166 (438)
250 KOG4332|consensus 97.4 0.00069 1.5E-08 56.3 7.6 84 102-189 67-154 (454)
251 PF02487 CLN3: CLN3 protein; 97.4 0.0012 2.5E-08 59.0 9.4 128 110-242 62-194 (402)
252 COG3104 PTR2 Dipeptide/tripept 97.4 0.012 2.5E-07 53.6 15.2 128 108-235 325-479 (498)
253 PF00854 PTR2: POT family; In 97.4 0.0019 4.1E-08 58.0 10.5 105 138-242 2-122 (372)
254 KOG3098|consensus 97.3 0.027 5.8E-07 51.4 17.6 109 110-219 282-411 (461)
255 PRK03612 spermidine synthase; 97.3 0.029 6.2E-07 52.6 17.6 117 102-219 45-168 (521)
256 KOG3810|consensus 97.3 0.0011 2.5E-08 57.1 7.5 201 116-329 51-258 (433)
257 KOG1237|consensus 97.2 0.01 2.2E-07 56.0 13.9 148 90-240 59-242 (571)
258 PF03092 BT1: BT1 family; Int 97.1 0.0034 7.3E-08 57.5 9.6 144 103-246 251-416 (433)
259 PF03219 TLC: TLC ATP/ADP tran 97.1 0.15 3.2E-06 47.4 19.9 115 105-219 56-203 (491)
260 PF13000 Acatn: Acetyl-coenzym 97.1 0.0045 9.7E-08 56.2 9.4 142 73-215 4-173 (544)
261 KOG3762|consensus 96.8 0.00063 1.4E-08 62.0 2.2 81 74-157 16-97 (618)
262 COG3202 ATP/ADP translocase [E 96.8 0.38 8.3E-06 44.0 19.9 113 105-219 59-207 (509)
263 KOG2563|consensus 96.8 0.008 1.7E-07 53.9 8.9 103 102-204 296-403 (480)
264 TIGR00939 2a57 Equilibrative N 96.3 0.22 4.8E-06 45.7 15.2 59 158-216 370-428 (437)
265 TIGR00939 2a57 Equilibrative N 96.2 0.15 3.2E-06 46.8 13.3 96 115-215 53-156 (437)
266 KOG1330|consensus 96.0 0.033 7.1E-07 50.3 7.8 118 102-219 278-409 (493)
267 PF01770 Folate_carrier: Reduc 95.8 0.42 9E-06 43.1 14.0 97 105-201 283-381 (412)
268 PF06963 FPN1: Ferroportin1 (F 95.5 2 4.3E-05 39.3 19.2 38 113-150 44-81 (432)
269 PF03137 OATP: Organic Anion T 95.4 0.0039 8.5E-08 58.6 0.0 74 71-146 307-383 (539)
270 KOG1479|consensus 95.2 0.3 6.6E-06 43.7 11.0 83 159-246 116-207 (406)
271 TIGR00805 oat sodium-independe 95.2 0.046 9.9E-07 52.7 6.5 65 87-153 348-415 (633)
272 KOG2325|consensus 94.2 0.033 7.1E-07 51.1 2.6 66 167-232 395-464 (488)
273 KOG3097|consensus 92.7 1 2.2E-05 39.2 8.8 73 116-189 67-139 (390)
274 PF01733 Nucleoside_tran: Nucl 92.3 0.04 8.7E-07 48.1 0.1 105 112-216 187-304 (309)
275 KOG1479|consensus 92.1 3.5 7.6E-05 37.1 11.8 125 91-216 265-399 (406)
276 KOG3880|consensus 91.0 0.86 1.9E-05 39.3 6.5 108 107-219 288-401 (409)
277 PF07672 MFS_Mycoplasma: Mycop 88.9 8.4 0.00018 32.5 10.6 102 110-212 144-255 (267)
278 TIGR00806 rfc RFC reduced fola 88.3 5.2 0.00011 37.1 9.9 97 108-204 299-397 (511)
279 TIGR00880 2_A_01_02 Multidrug 87.9 3.3 7.2E-05 30.3 7.4 44 107-150 87-130 (141)
280 KOG3626|consensus 85.9 1.7 3.6E-05 42.3 5.6 77 72-150 395-474 (735)
281 KOG3810|consensus 85.9 6.7 0.00015 34.7 8.6 94 110-203 274-369 (433)
282 PF07672 MFS_Mycoplasma: Mycop 85.2 1.3 2.7E-05 37.2 3.9 51 192-242 2-61 (267)
283 KOG4332|consensus 83.9 9.7 0.00021 32.5 8.5 96 109-204 284-388 (454)
284 COG1230 CzcD Co/Zn/Cd efflux s 82.6 31 0.00067 29.8 15.5 38 191-228 153-191 (296)
285 COG4262 Predicted spermidine s 82.5 35 0.00076 30.4 13.6 86 102-187 38-132 (508)
286 PF11947 DUF3464: Protein of u 82.2 8.9 0.00019 29.4 7.1 51 158-211 95-145 (153)
287 COG5336 Uncharacterized protei 82.0 2.8 6E-05 29.7 3.9 28 115-142 50-78 (116)
288 PF13000 Acatn: Acetyl-coenzym 81.7 17 0.00037 33.8 9.9 50 163-212 408-457 (544)
289 TIGR00769 AAA ADP/ATP carrier 78.0 60 0.0013 30.3 15.4 68 167-234 273-345 (472)
290 KOG3880|consensus 76.9 2.4 5.2E-05 36.7 2.8 128 110-242 65-198 (409)
291 PRK10263 DNA translocase FtsK; 76.4 26 0.00057 36.6 10.2 23 115-137 60-82 (1355)
292 PF01733 Nucleoside_tran: Nucl 74.4 0.99 2.2E-05 39.4 0.0 43 168-215 5-47 (309)
293 PF06912 DUF1275: Protein of u 72.0 52 0.0011 26.7 15.4 24 198-221 168-191 (209)
294 TIGR01667 YCCS_YHJK integral m 69.4 1.2E+02 0.0027 30.0 15.3 53 126-178 42-99 (701)
295 TIGR01666 YCCS hypothetical me 69.0 1.3E+02 0.0027 29.9 15.7 52 126-177 42-98 (704)
296 COG1268 BioY Uncharacterized c 67.1 26 0.00056 27.9 6.4 24 113-136 88-111 (184)
297 KOG4255|consensus 64.6 1E+02 0.0022 27.3 9.9 72 139-215 81-162 (439)
298 COG3389 Uncharacterized protei 64.5 16 0.00035 29.8 4.8 30 113-142 34-63 (277)
299 PF03219 TLC: TLC ATP/ADP tran 64.3 1.3E+02 0.0028 28.3 16.0 68 166-233 288-360 (491)
300 TIGR00926 2A1704 Peptide:H+ sy 62.4 53 0.0012 32.1 8.9 60 160-219 565-624 (654)
301 PF05631 DUF791: Protein of un 62.3 1.2E+02 0.0025 27.1 14.3 100 118-217 174-299 (354)
302 KOG0637|consensus 61.2 15 0.00033 33.7 4.6 60 113-172 338-397 (498)
303 COG1422 Predicted membrane pro 60.9 87 0.0019 25.2 9.1 12 206-217 32-43 (201)
304 KOG2881|consensus 60.1 75 0.0016 26.8 8.0 10 222-231 130-139 (294)
305 PF02694 UPF0060: Uncharacteri 59.5 19 0.00041 25.6 3.9 49 107-155 54-102 (107)
306 PF02535 Zip: ZIP Zinc transpo 59.4 1.2E+02 0.0026 26.3 13.3 12 164-175 264-275 (317)
307 PF10225 DUF2215: Uncharacteri 59.3 1E+02 0.0023 25.9 9.1 55 157-215 31-85 (249)
308 PF12805 FUSC-like: FUSC-like 59.0 1.2E+02 0.0025 26.1 13.6 35 142-176 4-39 (284)
309 PF02632 BioY: BioY family; I 57.2 48 0.001 25.4 6.2 26 113-138 59-84 (148)
310 PRK02237 hypothetical protein; 57.2 31 0.00066 24.6 4.6 48 108-155 57-104 (109)
311 TIGR00930 2a30 K-Cl cotranspor 56.6 2E+02 0.0044 29.7 12.1 10 217-226 515-524 (953)
312 PRK14229 camphor resistance pr 51.6 88 0.0019 22.4 7.6 24 167-190 56-79 (108)
313 KOG2927|consensus 49.3 28 0.00061 30.5 4.1 6 129-134 181-186 (372)
314 KOG1237|consensus 48.5 50 0.0011 31.7 6.1 61 159-219 457-517 (571)
315 PTZ00370 STEVOR; Provisional 47.5 52 0.0011 28.1 5.3 23 220-242 256-278 (296)
316 PF07857 DUF1632: CEO family ( 46.8 1.5E+02 0.0033 25.0 8.1 22 223-244 116-137 (254)
317 PF04281 Tom22: Mitochondrial 46.1 91 0.002 23.5 5.9 28 185-212 60-87 (137)
318 COG4769 Predicted membrane pro 45.9 45 0.00098 25.8 4.3 50 117-172 83-132 (181)
319 PF11299 DUF3100: Protein of u 44.0 25 0.00055 29.0 2.9 55 164-219 175-229 (241)
320 COG3086 RseC Positive regulato 42.9 1.4E+02 0.003 22.7 6.4 42 101-142 66-107 (150)
321 KOG3574|consensus 42.8 1.9E+02 0.0041 26.5 8.2 55 163-217 372-426 (510)
322 PRK11469 hypothetical protein; 42.5 1.6E+02 0.0035 23.6 7.3 31 123-153 151-181 (188)
323 PRK14230 camphor resistance pr 42.1 1.4E+02 0.003 21.9 7.6 23 167-189 60-82 (119)
324 KOG4830|consensus 41.0 36 0.00079 28.9 3.5 129 62-192 194-325 (412)
325 COG1575 MenA 1,4-dihydroxy-2-n 40.7 2.5E+02 0.0053 24.5 12.8 13 188-200 141-153 (303)
326 COG1422 Predicted membrane pro 40.4 1.3E+02 0.0028 24.2 6.3 26 208-233 30-55 (201)
327 PRK11715 inner membrane protei 38.8 3.2E+02 0.007 25.3 9.8 32 128-159 318-354 (436)
328 KOG3312|consensus 37.7 1E+02 0.0022 23.4 5.0 11 238-248 26-36 (186)
329 PF04550 Phage_holin_2: Phage 37.1 91 0.002 21.4 4.2 33 160-192 31-63 (89)
330 COG3462 Predicted membrane pro 37.0 1.3E+02 0.0028 21.5 5.1 24 256-279 88-111 (117)
331 TIGR02230 ATPase_gene1 F0F1-AT 36.6 1.5E+02 0.0033 20.9 6.9 19 201-219 48-66 (100)
332 PRK03818 putative transporter; 36.3 4E+02 0.0086 25.6 10.2 80 108-188 436-516 (552)
333 PF10785 NADH-u_ox-rdase: NADH 34.2 1.5E+02 0.0033 20.2 5.8 39 121-159 32-77 (86)
334 TIGR03802 Asp_Ala_antiprt aspa 34.1 3.5E+02 0.0075 26.1 9.3 81 108-191 451-533 (562)
335 TIGR00986 3a0801s05tom22 mitoc 33.0 1.3E+02 0.0029 22.7 5.0 24 185-208 58-81 (145)
336 KOG3097|consensus 32.7 48 0.001 29.3 3.0 42 106-147 309-350 (390)
337 PF04346 EutH: Ethanolamine ut 32.3 3.7E+02 0.008 24.0 12.7 68 110-178 50-120 (354)
338 PRK03612 spermidine synthase; 32.2 2.8E+02 0.0061 26.4 8.4 44 107-150 145-190 (521)
339 TIGR02230 ATPase_gene1 F0F1-AT 31.8 1.9E+02 0.0041 20.5 6.5 19 124-142 59-78 (100)
340 PF06123 CreD: Inner membrane 31.6 4.2E+02 0.0091 24.5 9.6 33 127-159 311-348 (430)
341 PF01405 PsbT: Photosystem II 31.3 86 0.0019 16.4 2.9 10 238-247 19-28 (29)
342 PF06779 DUF1228: Protein of u 31.0 1.7E+02 0.0038 19.9 6.8 45 171-219 5-50 (85)
343 PRK11875 psbT photosystem II r 29.6 96 0.0021 16.5 2.7 9 239-247 20-28 (31)
344 PRK07419 1,4-dihydroxy-2-napht 29.6 3.8E+02 0.0083 23.4 11.8 14 184-197 135-148 (304)
345 KOG4112|consensus 29.6 2E+02 0.0042 20.0 6.0 23 197-219 24-46 (101)
346 COG3202 ATP/ADP translocase [E 29.3 4.9E+02 0.011 24.6 15.3 71 165-235 289-365 (509)
347 PF08566 Pam17: Mitochondrial 28.9 1.9E+02 0.0041 22.8 5.4 28 102-129 72-101 (173)
348 COG2233 UraA Xanthine/uracil p 27.7 4E+02 0.0087 24.8 8.1 95 102-196 44-141 (451)
349 COG2119 Predicted membrane pro 27.6 2.6E+02 0.0057 22.3 6.0 39 113-151 140-178 (190)
350 PF05232 BTP: Bacterial Transm 27.4 99 0.0021 20.0 3.2 36 102-137 29-64 (67)
351 CHL00031 psbT photosystem II p 27.3 1E+02 0.0022 16.7 2.5 10 238-247 19-28 (33)
352 PF01528 Herpes_glycop: Herpes 27.2 2.4E+02 0.0053 25.4 6.6 19 173-191 247-265 (374)
353 PRK10697 DNA-binding transcrip 27.0 99 0.0022 22.6 3.4 12 236-247 57-68 (118)
354 PF00854 PTR2: POT family; In 26.9 2.4E+02 0.0052 25.1 6.8 47 110-156 75-121 (372)
355 PF07556 DUF1538: Protein of u 26.6 3.6E+02 0.0078 22.1 8.8 28 159-186 61-88 (212)
356 COG5547 Small integral membran 26.4 1.7E+02 0.0036 18.2 5.0 37 139-175 10-46 (62)
357 PF00860 Xan_ur_permease: Perm 25.3 2.1E+02 0.0045 25.9 6.1 100 92-197 21-127 (389)
358 TIGR03173 pbuX xanthine permea 25.3 3.6E+02 0.0078 24.5 7.6 94 102-196 23-117 (406)
359 PRK10692 hypothetical protein; 25.2 2.2E+02 0.0048 19.4 4.5 19 136-154 3-21 (92)
360 PF13829 DUF4191: Domain of un 24.1 4.2E+02 0.009 22.0 7.0 47 220-266 50-98 (224)
361 COG2610 GntT H+/gluconate symp 23.5 6E+02 0.013 23.6 10.1 41 108-148 58-107 (442)
362 TIGR00801 ncs2 uracil-xanthine 23.3 5.8E+02 0.013 23.3 10.4 31 104-134 34-64 (415)
363 PF10777 YlaC: Inner membrane 23.0 2.7E+02 0.0059 21.3 5.1 26 275-300 11-36 (155)
364 PF07760 DUF1616: Protein of u 22.5 5E+02 0.011 22.3 10.2 56 163-219 22-77 (287)
365 PLN02878 homogentisate phytylt 22.1 5.2E+02 0.011 22.3 8.0 20 133-152 195-214 (280)
366 COG1742 Uncharacterized conser 21.9 64 0.0014 22.9 1.6 44 107-150 55-98 (109)
367 KOG2765|consensus 21.4 5E+02 0.011 23.5 7.2 14 131-144 208-221 (416)
368 PRK04972 putative transporter; 21.3 7.4E+02 0.016 23.8 9.8 21 172-192 509-529 (558)
369 PRK14232 camphor resistance pr 21.3 3.4E+02 0.0073 19.9 8.5 23 168-190 61-83 (120)
370 COG1480 Predicted membrane-ass 21.0 6.8E+02 0.015 24.7 8.4 9 131-139 394-402 (700)
371 PF11151 DUF2929: Protein of u 20.7 2.3E+02 0.0049 17.6 5.2 39 207-245 13-55 (57)
372 PF11990 DUF3487: Protein of u 20.2 3.6E+02 0.0079 19.8 6.2 29 102-130 19-47 (121)
373 KOG4830|consensus 20.0 63 0.0014 27.6 1.5 42 95-139 43-93 (412)
No 1
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=8.7e-30 Score=241.53 Aligned_cols=263 Identities=20% Similarity=0.250 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q psy15539 65 ITQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLA 144 (333)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 144 (333)
+..|..+++++++.+..+++...++..+|.+..+ ++++..+.+++.+++.+|.+++++++|+++||+|||+.+++++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~---~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~l 239 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKD---LCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICL 239 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 4566777777788888888888888889988888 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----
Q psy15539 145 VPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----- 219 (333)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----- 219 (333)
++.+++.++++++++++.++++|++.|++.|+..+...++++|++|++.||..+++...++.+|.++++.++.++
T Consensus 240 il~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 240 SVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999888765332
Q ss_pred ------------HHHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCcc----hHHH--HHHHHH
Q psy15539 220 ------------SVYGLSIICALLPIFFVGLMLLMPESPQFHLKKNRVKQAKESLQWFRGSEYD----IDSE--ITDMQN 281 (333)
Q Consensus 220 ------------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~ 281 (333)
+||+.+++.++++++.++..+++||+|+|+..+++.+++.+.+++++..+.. .... .+.++.
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~ 399 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKT 399 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHH
Confidence 5899998888887777777888999999999999999999999998764421 1111 111111
Q ss_pred HHHh------hccC------------------ccchHhhhcChhhHHHHHHHHHHHHHHhhcchhhhhhchhccc
Q psy15539 282 SLEK------ERSD------------------KVPLMQAFSTPAAKRGLLIGLGVMFIQQFGGINAVVFYTVKIF 332 (333)
Q Consensus 282 ~~~~------~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 332 (333)
.... +... ..++.++|+.+ +++++++++++|+... .+++++..|+|.++
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~-~~~~tl~l~~~wf~~~-~~yygl~~w~P~~~ 472 (742)
T TIGR01299 400 IHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPE-VREITIKLMGVWFTLS-FGYYGLSVWFPDMI 472 (742)
T ss_pred hhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCcc-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 0000 0000 01356677766 8888888888887765 47788999999764
No 2
>KOG0569|consensus
Probab=99.97 E-value=6.1e-29 Score=222.54 Aligned_cols=268 Identities=32% Similarity=0.482 Sum_probs=216.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhccchhhhhhh---hcC--Ccccc--cCchh----HHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy15539 66 TQYMAALTATIGGFIMGTILGWTSPAGDRL---IAG--EYPFL--VTESD----LSFIGSSMALGAVFGSPVVGNLVDTV 134 (333)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~--~~~~~----~~~~~~~~~~~~~i~~~~~g~l~dr~ 134 (333)
+.......+.++.+..|+..+.+++..+.+ .++ ...+| .++++ .+.+.+.+.+|.++|+++.++++||+
T Consensus 8 ~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~ 87 (485)
T KOG0569|consen 8 RLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRF 87 (485)
T ss_pred HHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 445555666666688888888777653222 211 01244 34433 36678899999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHH
Q psy15539 135 GRKNTMLLLAVPTLVGWGLIIW---SQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILF 211 (333)
Q Consensus 135 Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~ 211 (333)
|||..+.++.++..++.+++.+ .+++..++++|++.|+..|......+.|+.|..|++.||....+.+.+..+|.++
T Consensus 88 GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll 167 (485)
T KOG0569|consen 88 GRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILL 167 (485)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHH
Confidence 9999999998888888777665 4688999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHH------HHHHHHHHHHHHHHHHHHHhhcccCChHHHHh-cCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHH
Q psy15539 212 VYAVGSWA------SVYGLSIICALLPIFFVGLMLLMPESPQFHLK-KNRVKQAKESLQWFRGSEYDIDSEITDMQNSLE 284 (333)
Q Consensus 212 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (333)
+..++.-- .|.+.+.+.++++++..+..+++||||+|+.. +++.++|++.++++++.+++.++..++.++..+
T Consensus 168 ~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~ 247 (485)
T KOG0569|consen 168 GQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEE 247 (485)
T ss_pred HHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 97775432 79999999999999988899999999999988 789999999999999876544333332222222
Q ss_pred --hhccCccchHhhhcChhhHHHHHHHHHHHHHHhhcchhhhhhchhcccC
Q psy15539 285 --KERSDKVPLMQAFSTPAAKRGLLIGLGVMFIQQFGGINAVVFYTVKIFK 333 (333)
Q Consensus 285 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (333)
.+++++.++++++++++.|+..++++.+.+.++++|++.+.+|++.+|+
T Consensus 248 ~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~ 298 (485)
T KOG0569|consen 248 EELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFK 298 (485)
T ss_pred hccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHH
Confidence 2223567899999999999999999999999999999999999998863
No 3
>KOG0254|consensus
Probab=99.96 E-value=1.6e-27 Score=221.69 Aligned_cols=267 Identities=34% Similarity=0.502 Sum_probs=217.8
Q ss_pred HHHHHHHHHHHHHhhhhhh--hccchhhhhhhhcCCcccccCc----hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHH
Q psy15539 66 TQYMAALTATIGGFIMGTI--LGWTSPAGDRLIAGEYPFLVTE----SDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNT 139 (333)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~ 139 (333)
......+...+..+..+++ .++..+....+.+......... .+.+++.+.+.++..++++++|+++|++|||+.
T Consensus 42 ~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~ 121 (513)
T KOG0254|consen 42 FVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKT 121 (513)
T ss_pred ehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3444555556666666665 4555555555554311112222 345899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 140 MLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 140 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
++++.+++.++.+++++++|+..++++|++.|+|.|+...+.+.|++|+.|++.||...++.+....+|.+++..++...
T Consensus 122 l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~ 201 (513)
T KOG0254|consen 122 LLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGT 201 (513)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998877766
Q ss_pred -----HHHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhC-CCcchHHHHHHHHHHH-Hhh-c-cCc
Q psy15539 220 -----SVYGLSIICALLPIFFVGLMLLMPESPQFHLKKNRVKQAKESLQWFRG-SEYDIDSEITDMQNSL-EKE-R-SDK 290 (333)
Q Consensus 220 -----~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~-~~~ 290 (333)
+||..+.+..+.+++.++..+++||+|+|+.++++.+++++.+.++++ ++.+.+.+.++++... .+. . ..+
T Consensus 202 ~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (513)
T KOG0254|consen 202 SKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGK 281 (513)
T ss_pred ccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhccccc
Confidence 599999999999888777788999999999999999999999999998 4555566655554221 111 1 122
Q ss_pred cchHhhhcChhhHHHHHHHHHHHHHHhhcchhhhhhchhcccC
Q psy15539 291 VPLMQAFSTPAAKRGLLIGLGVMFIQQFGGINAVVFYTVKIFK 333 (333)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (333)
..+.++++ |..++++++++.+..+++++|++.+.+|.+.+|+
T Consensus 282 ~~~~~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~ 323 (513)
T KOG0254|consen 282 ASWGELFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFK 323 (513)
T ss_pred ccHHHhcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHH
Confidence 24667777 5589999999999999999999999999999874
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.95 E-value=2.5e-26 Score=213.59 Aligned_cols=203 Identities=20% Similarity=0.129 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCC--cccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH
Q psy15539 65 ITQYMAALTATIGGFIMGTILGWTSPAGDRLIAGE--YPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLL 142 (333)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 142 (333)
+.++..++++.++.+..+++...++...|.+..+. .+.+.++.+.+++.+.+.++..++++++|+++||+|||+++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~ 91 (502)
T TIGR00887 12 WQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 45667777888888999999988888877665431 0134556677899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh------HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHh
Q psy15539 143 LAVPTLVGWGLIIWSQS------VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVG 216 (333)
Q Consensus 143 ~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~ 216 (333)
+.++.+++.++++++.+ +..++++|++.|++.|+..+....+++|++|+++||+++++.+....+|.++++.++
T Consensus 92 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~ 171 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVA 171 (502)
T ss_pred HHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888765 778999999999999999999999999999999999999999999999888888775
Q ss_pred HHH---------------------------HHHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCH-HHHHHHHHHHhC
Q psy15539 217 SWA---------------------------SVYGLSIICALLPIFFVGLMLLMPESPQFHLKKNRV-KQAKESLQWFRG 267 (333)
Q Consensus 217 ~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~ 267 (333)
.++ +||+.+.+.++++++.++..+++||+|+|+..+++. +++++.+.+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~ 250 (502)
T TIGR00887 172 LIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQ 250 (502)
T ss_pred HHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhc
Confidence 432 599999888888777777778899999999877765 446666666654
No 5
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.94 E-value=2.3e-24 Score=199.58 Aligned_cols=261 Identities=26% Similarity=0.389 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCC-----cccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHH
Q psy15539 66 TQYMAALTATIGGFIMGTILGWTSPAGDRLIAGE-----YPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTM 140 (333)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l 140 (333)
.....+..+.++.+..+++..++++..|.+.+.. .+++.++.+.+++.+++.++.+++++++|+++||+|||+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~ 88 (479)
T PRK10077 9 YIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL 88 (479)
T ss_pred HHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 3556667777788899999999888877776650 12388889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH------------hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHH
Q psy15539 141 LLLAVPTLVGWGLIIWS------------QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAG 208 (333)
Q Consensus 141 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g 208 (333)
+++.++.+++.+++++. ..+..++++|++.|++.|+..+...++++|++|+++||+++++.+.+..+|
T Consensus 89 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G 168 (479)
T PRK10077 89 KIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFG 168 (479)
T ss_pred HHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHH
Confidence 99999998888877653 235678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHH------------HHHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHH
Q psy15539 209 ILFVYAVGSWA------------SVYGLSIICALLPIFFVGLMLLMPESPQFHLKKNRVKQAKESLQWFRGSEYDIDSEI 276 (333)
Q Consensus 209 ~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (333)
.++++.++... +||+.|++.++..++.++..+++||+|+++..+++.+++++..++.+... +.....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~ 247 (479)
T PRK10077 169 QLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNT-LATQAL 247 (479)
T ss_pred HHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCCh-hHHHHH
Confidence 99887765422 79999998888777766667789999998877777777766666654322 222222
Q ss_pred HHHHHHHHhhccCccchHhhhcChhhHHHHHHHHHHHHHHhhcchhhhhhchhccc
Q psy15539 277 TDMQNSLEKERSDKVPLMQAFSTPAAKRGLLIGLGVMFIQQFGGINAVVFYTVKIF 332 (333)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 332 (333)
++.+...+++... ....+.- .....+..+....+.+..+++.+.+|.|+++
T Consensus 248 ~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~ 298 (479)
T PRK10077 248 QEIKHSLDHGRKT---GGKLLMF--GVGVIVIGVMLSVFQQFVGINVVLYYAPEIF 298 (479)
T ss_pred HHHHHHHHHhhhh---hhhhcch--hHHHHHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence 2222211111111 1111111 1222333344455566667777777777653
No 6
>TIGR00898 2A0119 cation transport protein.
Probab=99.93 E-value=2.6e-24 Score=200.43 Aligned_cols=223 Identities=22% Similarity=0.339 Sum_probs=182.2
Q ss_pred hhhhhhhcCCcccccC---chhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVT---ESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAG 166 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (333)
...|.+.++ ++++ ..+.+++.+++.+|.+++++++|+++||+|||++++++.++.+++.++.+++++++.++++
T Consensus 110 ~~~~~i~~e---~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 186 (505)
T TIGR00898 110 TFSSTIVTE---WDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVF 186 (505)
T ss_pred cccccEEEE---ecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 346777777 9998 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHhhcccCC
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-SVYGLSIICALLPIFFVGLMLLMPES 245 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~ 245 (333)
|++.|++.++..+....++.|++|+++|+.+.++...+..+|.++++.++..+ +||+.+++.+++.++..+..+++||+
T Consensus 187 r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~~~es 266 (505)
T TIGR00898 187 RLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPES 266 (505)
T ss_pred HHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999988776 89999999988887777677889999
Q ss_pred hHHHHhcCCHHHHHHHHHHHhCCCcc-hHHHHHHHH-HHHHhhccCccchHhhhcChhhHHHHHHHHHHHHH
Q psy15539 246 PQFHLKKNRVKQAKESLQWFRGSEYD-IDSEITDMQ-NSLEKERSDKVPLMQAFSTPAAKRGLLIGLGVMFI 315 (333)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (333)
|+|+..+++.+++.+.+++..+.+.. ...+..+.. ++.+++++++.++++++++|..++.++...+.++.
T Consensus 267 p~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 338 (505)
T TIGR00898 267 PRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFT 338 (505)
T ss_pred hHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHH
Confidence 99999999988888888776542221 111111111 11111112245788999999777666655555544
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.93 E-value=1.8e-24 Score=196.15 Aligned_cols=178 Identities=10% Similarity=0.024 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q psy15539 67 QYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVP 146 (333)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 146 (333)
++.....+++..+...++....+...|.+.++ +|++..+.+++.+++.+++.+++++.|+++||+|||+++..+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~---~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKD---LGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhh---cCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 45556666666677778888888888888888 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-------
Q psy15539 147 TLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA------- 219 (333)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~------- 219 (333)
.++++++++++++++.+++.|++.|++.+...+....++.|++|+++|++++++++.+..+|..+++.+++++
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999999989999999999999999999999999999999887653
Q ss_pred ---HHHHHHHHHHHHHHHH-HHHhhcccCChH
Q psy15539 220 ---SVYGLSIICALLPIFF-VGLMLLMPESPQ 247 (333)
Q Consensus 220 ---~~~~~~~~~~~~~~~~-~~~~~~~~e~~~ 247 (333)
+||+.|++.++++++. ++..+++||+|+
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 7999999988877654 445567788874
No 8
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.93 E-value=7.2e-24 Score=195.60 Aligned_cols=267 Identities=30% Similarity=0.427 Sum_probs=191.7
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccC--------chhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy15539 63 KRITQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVT--------ESDLSFIGSSMALGAVFGSPVVGNLVDTV 134 (333)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~g~l~dr~ 134 (333)
..++.+...+.+.++.+..+++...+....|....+ ++.+ ..+.+++.+++.++..++++++|+++||+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~ 98 (481)
T TIGR00879 22 TYWKVALLSLIAAIGGLMFGYDTGVIGGALALPAFE---FKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRF 98 (481)
T ss_pred ccHHHHHHHHHHHHHHHhcccccchhhhhhhcHHHH---HhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhh
Confidence 344555556666666677777777777777766665 5555 78999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHH
Q psy15539 135 GRKNTMLLLAVPTLVGWGLIIWSQ---SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILF 211 (333)
Q Consensus 135 Grr~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~ 211 (333)
|||++++++.++.+++.+++.+.. +++.++++|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+
T Consensus 99 grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 178 (481)
T TIGR00879 99 GRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILV 178 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHH
Confidence 999999999999999988886543 45589999999999999999999999999999999999999999999999999
Q ss_pred HHHHh---HHH----HHHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHH---HHHH
Q psy15539 212 VYAVG---SWA----SVYGLSIICALLPIFFVGLMLLMPESPQFHLKKNRVKQAKESLQWFRGSEYDIDSEIT---DMQN 281 (333)
Q Consensus 212 ~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 281 (333)
++.++ ... +||+.|++.++..++.++..+++||+|++...+++.++..+...+....+++.....+ ..+.
T Consensus 179 ~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (481)
T TIGR00879 179 AYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDI 258 (481)
T ss_pred HHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHH
Confidence 99998 332 8999999977777766667778899998776666666555555554433322211111 1111
Q ss_pred HH-HhhccCccchHhhhcChh-hHHHHHHHHHHHHHHhhcchhhhhhchhccc
Q psy15539 282 SL-EKERSDKVPLMQAFSTPA-AKRGLLIGLGVMFIQQFGGINAVVFYTVKIF 332 (333)
Q Consensus 282 ~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 332 (333)
.. .+.+..+..+.++++... ..++.++..++..+....+.+.+.+|.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (481)
T TIGR00879 259 KRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIF 311 (481)
T ss_pred HHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHH
Confidence 10 011111222344443221 2344555555555656666666777777654
No 9
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.92 E-value=1.2e-28 Score=226.39 Aligned_cols=258 Identities=32% Similarity=0.493 Sum_probs=204.9
Q ss_pred HHHHhhhhhhhccchhhhhhhh--cCC--ccc----ccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q psy15539 75 TIGGFIMGTILGWTSPAGDRLI--AGE--YPF----LVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVP 146 (333)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~----~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 146 (333)
.++.+..+++...++...+... ... ... +.++...+++.+...+|..+|++++|+++||+|||+.+.++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 3445667777766655533332 110 001 11234578899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh---hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----
Q psy15539 147 TLVGWGLIIWSQ---SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA---- 219 (333)
Q Consensus 147 ~~~~~~~~~~~~---~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~---- 219 (333)
..++.++.++++ +++.+.++|++.|++.|+..+....++.|..|++.|++..++.+.++.+|.+++..++...
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 9999999999999999999999999999999999999999999999999988887775433
Q ss_pred H---HHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHhhccCccchHhh
Q psy15539 220 S---VYGLSIICALLPIFFVGLMLLMPESPQFHLKKNRVKQAKESLQWFRGSEYDIDSEITDMQNSLEKERSDKVPLMQA 296 (333)
Q Consensus 220 ~---~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (333)
+ ||..+++.++++++.++..+++||||+|+..+++.+|+++.++++++.+. .+++.++..++.++.++.+.+++++
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l 244 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEI-EDEEIEEIKAEKKESQESKASWRDL 244 (451)
T ss_pred ccccccccccccccccccccccccccccccceeccccccccccccccccccccc-ccccccccccccccccccceeeeec
Confidence 4 99999998888887777778999999999999999999999998765422 2222222222222222233678899
Q ss_pred hcChhhHHHHHHHHHHHHHHhhcchhhhhhchhcccC
Q psy15539 297 FSTPAAKRGLLIGLGVMFIQQFGGINAVVFYTVKIFK 333 (333)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 333 (333)
++++.+++++++.+.+..+.++++.+.+.+|.+.+++
T Consensus 245 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~ 281 (451)
T PF00083_consen 245 FRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFE 281 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccc
Confidence 9998678888999999999999999999999988764
No 10
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2.4e-23 Score=181.37 Aligned_cols=175 Identities=20% Similarity=0.242 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q psy15539 66 TQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAV 145 (333)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 145 (333)
..+..++.+.++.|..+.........+|++.++ +|.|..+.|++.++|.++..+++++...+.||+.||++++..+.
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~d---l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~ 86 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAAD---LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA 86 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence 346667788888888888888999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HH
Q psy15539 146 PTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SV 221 (333)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~ 221 (333)
++.++++++++++|++.++++|++.|+..|..++...++..++.|+++|++++++...+..++.++|.+++.++ ||
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW 166 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGW 166 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888776 99
Q ss_pred HHHHHHHHHHHHHHHHH-hhccc
Q psy15539 222 YGLSIICALLPIFFVGL-MLLMP 243 (333)
Q Consensus 222 ~~~~~~~~~~~~~~~~~-~~~~~ 243 (333)
|..|++.+.++++.++. +..+|
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999876554 44677
No 11
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.91 E-value=7.3e-23 Score=189.75 Aligned_cols=178 Identities=20% Similarity=0.143 Sum_probs=145.8
Q ss_pred HHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchh-HHH-----HHHHHHHHHHHHHHHHHHhhhccchhHHHHH
Q psy15539 69 MAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESD-LSF-----IGSSMALGAVFGSPVVGNLVDTVGRKNTMLL 142 (333)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 142 (333)
..+..+.++.++.+++...++...|.+.++ ++.+.+. ..+ +.++.++++.++++++|+++||+|||+++.+
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 92 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKV---FFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 345666778888999999988888888777 6543322 122 2477789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhHHH--------HHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHH
Q psy15539 143 LAVPTLVGWGLIIWSQSVIM--------FCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYA 214 (333)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~ 214 (333)
+.++++++++++++++++.. ++++|+++|++.|+.++...++++|++|+++||++.++...+..+|..+++.
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998764 7899999999999999999999999999999999999988887777777765
Q ss_pred HhHH------------HHHHHHHHHHHHHHHHHHHHhhcccCChHHH
Q psy15539 215 VGSW------------ASVYGLSIICALLPIFFVGLMLLMPESPQFH 249 (333)
Q Consensus 215 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 249 (333)
+... .+||+.|++.++++++.++....+||+|++.
T Consensus 173 ~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~ 219 (490)
T PRK10642 173 VVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQ 219 (490)
T ss_pred HHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHH
Confidence 4322 2799999997766665555566789998764
No 12
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.91 E-value=1e-22 Score=185.92 Aligned_cols=179 Identities=19% Similarity=0.124 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccc---cCchhHHHH---HHHHHHHHHHHHHHHHHhhhccchhHH
Q psy15539 66 TQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFL---VTESDLSFI---GSSMALGAVFGSPVVGNLVDTVGRKNT 139 (333)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~i~~~~~g~l~dr~Grr~~ 139 (333)
+++..+..+.++.+...++...++...|.+.++ ++ .+..+.+.. .+..+++..++++++|+++||+|||++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~ 95 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHI---FFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS 95 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 345556666777788888888888888888777 53 444444333 444555566999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHH--------HHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHH
Q psy15539 140 MLLLAVPTLVGWGLIIWSQSVI--------MFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILF 211 (333)
Q Consensus 140 l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~ 211 (333)
+.++.++++++++++++++++. .++++|+++|++.|+.++...++++|++|+++||++.++.+.+...|.++
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 96 MLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH
Confidence 9999999999999999887653 68899999999999999999999999999999999999888887777777
Q ss_pred HHHHhHH------------HHHHHHHHHHHHHHHHHHHHhhcccCChH
Q psy15539 212 VYAVGSW------------ASVYGLSIICALLPIFFVGLMLLMPESPQ 247 (333)
Q Consensus 212 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 247 (333)
++.+... .+||+.|++.++++++.++.....||+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~ 223 (432)
T PRK10406 176 ALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQ 223 (432)
T ss_pred HHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCch
Confidence 6655322 28999999888777665554455677653
No 13
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=2.1e-23 Score=179.77 Aligned_cols=182 Identities=17% Similarity=0.110 Sum_probs=163.2
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH
Q psy15539 63 KRITQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLL 142 (333)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 142 (333)
.++.++.+.+.+.+++....+..-..+...|.+.++ .++|.++.|++.+.+++++.++.++.|.++||.+.|+.+.+
T Consensus 23 y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~---~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~ 99 (448)
T COG2271 23 YKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIED---GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehH
Confidence 334455666667777777777777788889999998 88999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHh--HHH-
Q psy15539 143 LAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVG--SWA- 219 (333)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~--~~~- 219 (333)
++++.++.+++++++++...+.++.++.|..+|.-.|.+...+..|+|+++||+..++++++-.+|+.+.|++. +++
T Consensus 100 gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~ 179 (448)
T COG2271 100 GLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA 179 (448)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888 555
Q ss_pred ---HHHHHHHHHHHHHHHH-HHHhhcccCChH
Q psy15539 220 ---SVYGLSIICALLPIFF-VGLMLLMPESPQ 247 (333)
Q Consensus 220 ---~~~~~~~~~~~~~~~~-~~~~~~~~e~~~ 247 (333)
+||..|++.++++++. ++.++..+++|+
T Consensus 180 ~~~~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 180 FHGGWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 8999999999998874 555667788875
No 14
>KOG0255|consensus
Probab=99.90 E-value=1.2e-22 Score=189.79 Aligned_cols=213 Identities=24% Similarity=0.228 Sum_probs=174.0
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVV 181 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~ 181 (333)
+..+.....+..+++++|.++|.+++|+++||+|||++++++.++..++.++.++++|++.++++|++.|++.++.....
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~ 192 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVG 192 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHh
Confidence 66677788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH--HHHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHH
Q psy15539 182 PMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA--SVYGLSIICALLPIFFVGLMLLMPESPQFHLKKNRVKQAK 259 (333)
Q Consensus 182 ~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 259 (333)
..++.|++++++|+.+..+ ......++.+++.+++++ +||+.+++..++.++.++..++.||+|+|+..+++.+++.
T Consensus 193 ~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~ 271 (521)
T KOG0255|consen 193 FGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAI 271 (521)
T ss_pred HhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHH
Confidence 9999999999999999999 555555556666665555 8999999999998887777677779999999999999999
Q ss_pred HHHHHHhCCC---cchHHHHHHH---HHHHHhhccCccchHhhhcChhhHHHHHHHHHHHHH
Q psy15539 260 ESLQWFRGSE---YDIDSEITDM---QNSLEKERSDKVPLMQAFSTPAAKRGLLIGLGVMFI 315 (333)
Q Consensus 260 ~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (333)
+.+++..+.+ .+..+...+. +.......+++..+.++++.|..++.++..++.++.
T Consensus 272 ~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 333 (521)
T KOG0255|consen 272 KILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFV 333 (521)
T ss_pred HHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHH
Confidence 9998876432 2222222211 111111223446689999999777777777777754
No 15
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.90 E-value=2.7e-22 Score=181.48 Aligned_cols=182 Identities=20% Similarity=0.153 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q psy15539 65 ITQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLA 144 (333)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 144 (333)
++++.....+.+..+..+++....+...|.+.++ +|.+..+.+++.+++.++..+++++.|+++||+|||++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~ 84 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGE---FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSI 84 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3456666777777778888888888889999888 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----H
Q psy15539 145 VPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----S 220 (333)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~ 220 (333)
++.+++++++.++++++.+++.|++.|++.+..++...+++.|++|+++|+++.++.+.+..+|..+++.++..+ +
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 85 VLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887765 3
Q ss_pred --HHHHHHHHHHHHHHHHHHhhcccCChHHH
Q psy15539 221 --VYGLSIICALLPIFFVGLMLLMPESPQFH 249 (333)
Q Consensus 221 --~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 249 (333)
|++.+++.++..++.++....+||++.+.
T Consensus 165 ~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 195 (405)
T TIGR00891 165 DGWRALFFISILPIIFALWLRKNIPEAEDWK 195 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCChhHH
Confidence 99999887666666555566778876543
No 16
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.90 E-value=1.5e-22 Score=185.01 Aligned_cols=177 Identities=16% Similarity=0.055 Sum_probs=151.8
Q ss_pred HHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH
Q psy15539 69 MAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTL 148 (333)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~ 148 (333)
.......+..+...++...++..+|.+.++ +|.+..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLAD---LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHH
Confidence 344444455555555555666778989888 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHH
Q psy15539 149 VGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGL 224 (333)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~ 224 (333)
++++++.++++++.+++.|++.|++.|...+....++.|++|+++|++++++.+.+..+|..+++.+.+++ +||+.
T Consensus 100 ~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~ 179 (434)
T PRK11663 100 IINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYG 179 (434)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 99999999999999999999999999988899999999999999999999999999999999999887766 89999
Q ss_pred HHHHHHHHHHH-HHHhhcccCChHH
Q psy15539 225 SIICALLPIFF-VGLMLLMPESPQF 248 (333)
Q Consensus 225 ~~~~~~~~~~~-~~~~~~~~e~~~~ 248 (333)
|++.+++.++. ++..++++|+|.+
T Consensus 180 f~~~~i~~~~~~~~~~~~~~~~p~~ 204 (434)
T PRK11663 180 MMIAGIIAIVVGLFLCWRLRDKPQA 204 (434)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHhh
Confidence 99888776544 3444567887643
No 17
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.90 E-value=2e-22 Score=179.58 Aligned_cols=207 Identities=13% Similarity=0.071 Sum_probs=155.3
Q ss_pred cchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q psy15539 87 WTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAG 166 (333)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (333)
.+++.+|.+.++ +|+++.+.+++.+.+.+++.+++++.|+++||+|||+++..+.+....+.+.....+++..++++
T Consensus 9 ~~~~~lp~i~~~---~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (368)
T TIGR00903 9 TFSPVLSLVAED---IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLAC 85 (368)
T ss_pred HHHhhHHHHHHH---hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 455678889888 99999999999999999999999999999999999987765555554443333333789999999
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHH-HHHhhc
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFF-VGLMLL 241 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~ 241 (333)
|++.|++.+. .......++|++|+++|++++++.+.+..+|.++++.++.++ +||+.|++.++++++. ++.+++
T Consensus 86 R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~ 164 (368)
T TIGR00903 86 QLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAA 164 (368)
T ss_pred HHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999986 455666679999999999999999999999999999998887 9999999988877664 445557
Q ss_pred ccCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHhhccCccchHhhhcChhhHHHHHHHHHHHHHHhhcch
Q psy15539 242 MPESPQFHLKKNRVKQAKESLQWFRGSEYDIDSEITDMQNSLEKERSDKVPLMQAFSTPAAKRGLLIGLGVMFIQQFGGI 321 (333)
Q Consensus 242 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (333)
+||+|++.. + ..+.+ +. ..++++++++|.. +.+.+..++.....
T Consensus 165 lp~~p~~~~---~--------------~~~~~----~~----------~~~~~~ll~~~~~-----~~~~~~~~~~~~~~ 208 (368)
T TIGR00903 165 LPALPFQAA---E--------------GFGFK----DA----------VKEFGALAGRKDL-----WIIGAILGFGVALF 208 (368)
T ss_pred cCCCCCCCC---C--------------CcchH----HH----------HHHHHHHHcChhH-----HHHHHHHHHHHHHH
Confidence 898875310 0 00000 00 0135678888743 33333444455556
Q ss_pred hhhhhchhcccC
Q psy15539 322 NAVVFYTVKIFK 333 (333)
Q Consensus 322 ~~~~~y~~~~~~ 333 (333)
+.+..|+|.+++
T Consensus 209 ~~~~~wlp~~L~ 220 (368)
T TIGR00903 209 DNLAIWLEAALR 220 (368)
T ss_pred HHHHHHHHHHHH
Confidence 678889998863
No 18
>PRK03545 putative arabinose transporter; Provisional
Probab=99.89 E-value=7.4e-22 Score=178.04 Aligned_cols=176 Identities=12% Similarity=0.093 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q psy15539 67 QYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVP 146 (333)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 146 (333)
+|..++.+.+..+..........+.+|.+.++ +|.+..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~---~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 83 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQS---FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVL 83 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhH---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 34444444454444444444445567888888 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHH
Q psy15539 147 TLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVY 222 (333)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~ 222 (333)
.+++++++.++++++.++++|++.|++.+...+...+++.|++|+++|++++++...+..+|..++|++++.+ +||
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~ 163 (390)
T PRK03545 84 FIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWR 163 (390)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHH
Confidence 9999999999999999999999999999988899999999999999999999999999999999999888765 899
Q ss_pred HHHHHHHHHHHHHHHH-hhcccCC
Q psy15539 223 GLSIICALLPIFFVGL-MLLMPES 245 (333)
Q Consensus 223 ~~~~~~~~~~~~~~~~-~~~~~e~ 245 (333)
+.|++.++++++..+. ..++|+.
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999988877665433 3345654
No 19
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.89 E-value=9.8e-22 Score=179.29 Aligned_cols=177 Identities=20% Similarity=0.207 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q psy15539 67 QYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVP 146 (333)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 146 (333)
++.....+.+..+..+++.....+.+|.+.++ +|.++.+.+++.+++.++..+++++.|+++||+|||+++.++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFYIMYLIKAD---LGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 33445566666677777777778888988888 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHH
Q psy15539 147 TLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVY 222 (333)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~ 222 (333)
.++++++++++++++.++++|++.|++.+..++....++.|++|+++|+++.++...+..+|.++++.+...+ +||
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~ 172 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWR 172 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998887665 899
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCh
Q psy15539 223 GLSIICALLPIFFVGLMLLMPESP 246 (333)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~e~~ 246 (333)
+.+++.++..++.+......||++
T Consensus 173 ~~f~i~~~~~~~~~~~~~~~p~~~ 196 (426)
T PRK12307 173 AAFFVGLLPVLLVIYIRARAPESK 196 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCh
Confidence 998875544333332223345554
No 20
>TIGR00895 2A0115 benzoate transport.
Probab=99.89 E-value=6.7e-22 Score=178.32 Aligned_cols=183 Identities=23% Similarity=0.273 Sum_probs=154.8
Q ss_pred HHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q psy15539 67 QYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVP 146 (333)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 146 (333)
.+.....+.+..+..++.........|.+.++ +|.+..+.+++.+...++..++.++.|+++||+|||+.+..+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAE---WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 34444555555556666666666778888888 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHH
Q psy15539 147 TLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVY 222 (333)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~ 222 (333)
.+++.+++.+.++++.+++.+++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++.+++++ +|+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~ 171 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWR 171 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccce
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988766 788
Q ss_pred HHHHHHHHHHHH-HHHHhhcccCChHHHHhc
Q psy15539 223 GLSIICALLPIF-FVGLMLLMPESPQFHLKK 252 (333)
Q Consensus 223 ~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~ 252 (333)
..+++.+++.++ .++..+++||++++..++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (398)
T TIGR00895 172 SLFYVGGIAPLLLLLLLMRFLPESIDFLVSK 202 (398)
T ss_pred eehhhhhhHHHHHHHHHHHhCCCCChHHHhc
Confidence 888887655544 444556788887654433
No 21
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.89 E-value=2.2e-21 Score=174.90 Aligned_cols=176 Identities=13% Similarity=0.127 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q psy15539 67 QYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVP 146 (333)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 146 (333)
.|...+.+.++.+..........+.+|.+.++ +|.++++.++..+++.++..+++++.|.++||+|||+++..+.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~ 94 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQD---LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVL 94 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHH
Confidence 44444444444444444444445567888888 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHH
Q psy15539 147 TLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVY 222 (333)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~ 222 (333)
.+++.+++.++++++.++++|++.|++.+...+...+++.|++|+++|+++.++...+..+|..++|.+++++ +|+
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~ 174 (394)
T PRK10213 95 LTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWR 174 (394)
T ss_pred HHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998876 899
Q ss_pred HHHHHHHHHHHHHHHHh-hcccCC
Q psy15539 223 GLSIICALLPIFFVGLM-LLMPES 245 (333)
Q Consensus 223 ~~~~~~~~~~~~~~~~~-~~~~e~ 245 (333)
+.|++.++++++..+.. ...||+
T Consensus 175 ~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 175 NVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCC
Confidence 99988877666543333 245654
No 22
>KOG0253|consensus
Probab=99.88 E-value=1.7e-21 Score=164.42 Aligned_cols=253 Identities=21% Similarity=0.144 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q psy15539 66 TQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAV 145 (333)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 145 (333)
.++...+...+..+...+-.-..+-+.|..... +|.+..+..++......|..+++..+|.++|++|||+.+.+..+
T Consensus 75 fq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~---w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l 151 (528)
T KOG0253|consen 75 FQWYLFFVAGMGWMADAMEMMLLSLILPALDEV---WGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFL 151 (528)
T ss_pred chhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhh---hchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHH
Confidence 344455555555554443333333445656666 88888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HH
Q psy15539 146 PTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SV 221 (333)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~ 221 (333)
...+..++.+.++|+..++++|.+.|+|.|+ .|...++-.|..|...|+..+-+. ..+.+|.++...++... ||
T Consensus 152 ~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gw 229 (528)
T KOG0253|consen 152 VTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGW 229 (528)
T ss_pred HHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhH
Confidence 9999999999999999999999999999999 888888999999999998877766 88888888887776544 99
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCcc----------hHHHHH----HHHHHH-Hhh
Q psy15539 222 YGLSIICALLPIFFVGLMLLMPESPQFHLKKNRVKQAKESLQWFRGSEYD----------IDSEIT----DMQNSL-EKE 286 (333)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~-~~~ 286 (333)
||.......+..+.+...+++||+|++...+++.+++.++++++...+.. ..++.+ .+++.. +..
T Consensus 230 r~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ 309 (528)
T KOG0253|consen 230 RYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAA 309 (528)
T ss_pred HHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccc
Confidence 99998888887788888889999999999999999999999988643321 111111 111111 111
Q ss_pred ccCccchHhhhcChhhHHHHHHHHHHHHHHhhcchhhhhhchhc
Q psy15539 287 RSDKVPLMQAFSTPAAKRGLLIGLGVMFIQQFGGINAVVFYTVK 330 (333)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 330 (333)
++...+..+++..+ .++++++.+..||. +.+.||...
T Consensus 310 ke~rg~~~nLlsp~-lrkttlllw~iwfg------nafsyyg~V 346 (528)
T KOG0253|consen 310 KEVRGGTTNLLSPK-LRKTTLLLWRIWFG------NAFSYYGSV 346 (528)
T ss_pred cccccchHhhcChH-HHHHHHHHHHHHHh------hHHHHHHHH
Confidence 23345567777654 99999999999998 456666544
No 23
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.88 E-value=3.1e-21 Score=179.06 Aligned_cols=178 Identities=14% Similarity=0.039 Sum_probs=158.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q psy15539 66 TQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAV 145 (333)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 145 (333)
+++..+..+++..++...+.+.++..+|.+.++ +|.+..+.+|+.+.+.++..++.++.|+++||+|||++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~---l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~ 79 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMT---LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGT 79 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 346677788888888889999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccC-CCcchhhHHHHHHHHHHHHHHHHHHHhHHH----H
Q psy15539 146 PTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIA-ETEIRGTLGTYFQLQCTAGILFVYAVGSWA----S 220 (333)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~-~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~ 220 (333)
+.+++++++++++|++.++++|+++|++.+...+.....+.+.+ |+++|+++.++......+|..++|.+++++ +
T Consensus 80 ~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g 159 (495)
T PRK14995 80 LFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY 159 (495)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999988888777776665 779999999999999999999999999887 8
Q ss_pred HHHHHHHHHHHHHHHH-HHhhcccCCh
Q psy15539 221 VYGLSIICALLPIFFV-GLMLLMPESP 246 (333)
Q Consensus 221 ~~~~~~~~~~~~~~~~-~~~~~~~e~~ 246 (333)
||+.|++...+.++.+ +..+++|+.+
T Consensus 160 wr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 160 WGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999998877766543 3445677764
No 24
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.88 E-value=8e-22 Score=181.90 Aligned_cols=181 Identities=14% Similarity=0.102 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHhhhhhhhccchhhhhhhhcC-------------------CcccccCchhHHHHHHHHHHHHHHHHHHH
Q psy15539 67 QYMAALTATIGGFIMGTILGWTSPAGDRLIAG-------------------EYPFLVTESDLSFIGSSMALGAVFGSPVV 127 (333)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 127 (333)
++....++.++......+....+...+.+.++ .++++++..+.|++.+.+.+++.+++++.
T Consensus 17 r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~ 96 (465)
T TIGR00894 17 RLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIPV 96 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcch
Confidence 44455555555544445555555555444431 11488999999999999999999999999
Q ss_pred HHhhhccchhHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHH
Q psy15539 128 GNLVDTVGRKNTMLLLAVPTLVGWGLIIWS--QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQC 205 (333)
Q Consensus 128 g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~ 205 (333)
|+++||+|||+++.++.++++++.+++.++ .++..+++.|++.|++.+...+....++.|++|+++|+++.++...+.
T Consensus 97 g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 176 (465)
T TIGR00894 97 GYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGF 176 (465)
T ss_pred HHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999988887554 457789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHhh-cccCChH
Q psy15539 206 TAGILFVYAVGSWA-----SVYGLSIICALLPIFFVGLML-LMPESPQ 247 (333)
Q Consensus 206 ~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~e~~~ 247 (333)
.+|.++++++.+++ +|++.|++.+++.++..+.++ +.+|+|+
T Consensus 177 ~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~ 224 (465)
T TIGR00894 177 QLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPS 224 (465)
T ss_pred HHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcc
Confidence 99999999987765 689899998888776555444 4566653
No 25
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.88 E-value=3.8e-21 Score=174.29 Aligned_cols=180 Identities=21% Similarity=0.206 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q psy15539 66 TQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAV 145 (333)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 145 (333)
++|....++.+..+..+++....+...|.+.++ +|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQE---FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 567777778888888888888888888999888 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HH
Q psy15539 146 PTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SV 221 (333)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~ 221 (333)
+.+++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++..+ +|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 168 (406)
T PRK11551 89 LFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAW 168 (406)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887665 79
Q ss_pred HHHHHHHHHHHHHHH-HHhhcccCChHH
Q psy15539 222 YGLSIICALLPIFFV-GLMLLMPESPQF 248 (333)
Q Consensus 222 ~~~~~~~~~~~~~~~-~~~~~~~e~~~~ 248 (333)
++.+++.+++.++.. +..+++||+|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 196 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPESRAF 196 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 998888776655543 344567887654
No 26
>KOG2532|consensus
Probab=99.88 E-value=1.1e-21 Score=177.73 Aligned_cols=209 Identities=15% Similarity=0.221 Sum_probs=172.4
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHhhhhhhhh
Q psy15539 101 PFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ--SVIMFCAGRLLTGFGGGSFA 178 (333)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~g~~~ 178 (333)
+++++..+.+++.+.++.|+++++++.|+++||+|-|+++..+.++.++++++..++. +++.+++.|+++|++.|..+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHH
Confidence 4889999999999999999999999999999999999999999999999999988765 44577899999999999999
Q ss_pred hhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHhh-cccCChHHHHhc
Q psy15539 179 VVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVYGLSIICALLPIFFVGLML-LMPESPQFHLKK 252 (333)
Q Consensus 179 ~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~ 252 (333)
|....+.+.|.|+++|++..++...+..+|.+++.++++++ ||+.+|++.++++++..++++ +..|+|... +.
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h-~~ 225 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH-PN 225 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC-CC
Confidence 99999999999999999999999999999999999988877 899999999999988665554 556676431 11
Q ss_pred CCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHhhc---cCccchHhhhcChhhHHHHHHHHHHHHHHhhcchhhhhhchh
Q psy15539 253 NRVKQAKESLQWFRGSEYDIDSEITDMQNSLEKER---SDKVPLMQAFSTPAAKRGLLIGLGVMFIQQFGGINAVVFYTV 329 (333)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 329 (333)
-. ++|.+.++.+..++. +.+.+++++++++. ++++++..++...+...+..|+|
T Consensus 226 is------------------~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~-----vwai~~~~f~~~~~~~~l~~y~P 282 (466)
T KOG2532|consen 226 IS------------------EKELKYIEKGKSEAHVKKKPPVPYKAILTSPP-----VWAIWISAFGGNWGFYLLLTYLP 282 (466)
T ss_pred CC------------------HHHHHHHHhcccccccCCCCCCCHHHHHcCHH-----HHHHHHHHHHHHHHHHHHHHHhh
Confidence 11 222222222211111 13668999999985 66777777888888899999999
Q ss_pred cccC
Q psy15539 330 KIFK 333 (333)
Q Consensus 330 ~~~~ 333 (333)
.|++
T Consensus 283 tY~~ 286 (466)
T KOG2532|consen 283 TYLK 286 (466)
T ss_pred HHHH
Confidence 9874
No 27
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.88 E-value=3.1e-21 Score=175.01 Aligned_cols=170 Identities=16% Similarity=0.074 Sum_probs=147.8
Q ss_pred HHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q psy15539 74 ATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGL 153 (333)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 153 (333)
+.+..+........+.+.+|.+.++ ++.+..+.++..+++.+++++++++.|+++||+|||++++.+.++.++++++
T Consensus 21 ~~~~~~~~~~~~~~~~p~l~~i~~~---~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 97 (413)
T PRK15403 21 LILYDFAAYLTTDLIQPGIINVVRD---FNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAA 97 (413)
T ss_pred HHHHHHHHHHHHHhhccCHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 3444455556667777888888888 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHH
Q psy15539 154 IIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICA 229 (333)
Q Consensus 154 ~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~ 229 (333)
+.++++++.++++|++.|++.+...+...+++.|++|+++|++++++...+..+|..++|.+++.+ +|++.|++.+
T Consensus 98 ~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~ 177 (413)
T PRK15403 98 TLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIA 177 (413)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 999999999999999999998877777788899999999999999999999999999999888765 8999999988
Q ss_pred HHHHHHHHH-hhcccCCh
Q psy15539 230 LLPIFFVGL-MLLMPESP 246 (333)
Q Consensus 230 ~~~~~~~~~-~~~~~e~~ 246 (333)
++.++..+. .+++||++
T Consensus 178 ~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 178 VMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHHHhCCCCc
Confidence 877765543 44578764
No 28
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.88 E-value=5.2e-22 Score=183.09 Aligned_cols=177 Identities=18% Similarity=0.174 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy15539 68 YMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPT 147 (333)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 147 (333)
+.....+.+..+....+...++...|.+.++ +|++..+.|++.+++.+++.+++++.|+++||+|||+++.++.+++
T Consensus 28 ~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~---~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 28 MQSYLVVFIGYLTMYLIRKNFKAAQNDMIST---YGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHHHHHHhcChhhhhHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 3344455555555566777788888999988 9999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHH-----HhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH---
Q psy15539 148 LVGWGLIIW-----SQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA--- 219 (333)
Q Consensus 148 ~~~~~~~~~-----~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~--- 219 (333)
++++++.++ +++++.++++|++.|++.+...+....+++|++|+++||+++++++.+..+|.++++.+..+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 105 AICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 877776665 579999999999999999999999999999999999999999999999999999988876543
Q ss_pred ----HHHHHHHHHHHHHHHHH-HHhhcccCChH
Q psy15539 220 ----SVYGLSIICALLPIFFV-GLMLLMPESPQ 247 (333)
Q Consensus 220 ----~~~~~~~~~~~~~~~~~-~~~~~~~e~~~ 247 (333)
+|+..+.+.+++.++.. +.+++.+++|+
T Consensus 185 ~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~ 217 (467)
T PRK09556 185 FFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPE 217 (467)
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 47777777777766543 33445566654
No 29
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.87 E-value=2.2e-21 Score=174.52 Aligned_cols=161 Identities=21% Similarity=0.191 Sum_probs=142.8
Q ss_pred hhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy15539 83 TILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIM 162 (333)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (333)
.+...++...|.+.++ +|.+..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.++++++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~---~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
T TIGR00893 8 LDRANLSFAAPMLQED---LGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVS 84 (399)
T ss_pred HHHHhhhHhHHHHHHh---hCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHH
Confidence 3445556667778887 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH
Q psy15539 163 FCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGL 238 (333)
Q Consensus 163 ~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 238 (333)
++++|++.|++.+...+....++.|++|+++|+++.++.+....+|.++++.+++++ +|++.+++.+++.++..+.
T Consensus 85 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 164 (399)
T TIGR00893 85 LYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVL 164 (399)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998865 8999999888777665443
Q ss_pred -hhcccCCh
Q psy15539 239 -MLLMPESP 246 (333)
Q Consensus 239 -~~~~~e~~ 246 (333)
.++.||+|
T Consensus 165 ~~~~~~~~~ 173 (399)
T TIGR00893 165 WLKFIPDPP 173 (399)
T ss_pred hhheecCCC
Confidence 34556654
No 30
>PRK09952 shikimate transporter; Provisional
Probab=99.87 E-value=1.9e-20 Score=171.24 Aligned_cols=178 Identities=19% Similarity=0.128 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhhhcCCccc--ccCchhHHHHH-----HHHHHHHHHHHHHHHHhhhccchhHHH
Q psy15539 68 YMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPF--LVTESDLSFIG-----SSMALGAVFGSPVVGNLVDTVGRKNTM 140 (333)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~i~~~~~g~l~dr~Grr~~l 140 (333)
+.......++.+..+++...++...|.+..+ ++ +.++. .+++. ++.+++..+++++.|+++||+|||+++
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNR--EFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 3456666677778888888777766544332 03 45554 44443 345566789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHH--------HHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHH
Q psy15539 141 LLLAVPTLVGWGLIIWSQSVI--------MFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFV 212 (333)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~ 212 (333)
.++.++++++++++++++++. .++++|+++|++.|+.++....++.|++|+++|++..+..+.+..+|.+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999998876 588899999999999999999999999999999999999999999998888
Q ss_pred HHHhHH------------HHHHHHHHHHHHHHHHHHHHhhcccCChHH
Q psy15539 213 YAVGSW------------ASVYGLSIICALLPIFFVGLMLLMPESPQF 248 (333)
Q Consensus 213 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 248 (333)
..+..+ .+||+.|++.+++.++........||+|++
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~ 225 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEF 225 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 665432 379999998877765544444467787754
No 31
>KOG2533|consensus
Probab=99.86 E-value=1.1e-20 Score=171.77 Aligned_cols=215 Identities=13% Similarity=0.051 Sum_probs=166.1
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVV 181 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~ 181 (333)
.+....+.+.+.++++++++++.++++.+.||++-.+.+....+++++..++.....|++.+++.|++.|+.+++.+|..
T Consensus 76 l~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~ 155 (495)
T KOG2533|consen 76 LKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGV 155 (495)
T ss_pred cchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHH
Confidence 88888999999999999999999999999999999999999999998888888889999999999999999999999999
Q ss_pred hhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----------HHHHHHHHHHHHHHHH-HHHhhcccCChHHHH
Q psy15539 182 PMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----------SVYGLSIICALLPIFF-VGLMLLMPESPQFHL 250 (333)
Q Consensus 182 ~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~ 250 (333)
..+++.|+.+++||+.++++.+...+|++++.+++..+ +||+.|++.+++.++. +++++++|+.|....
T Consensus 156 ~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~ 235 (495)
T KOG2533|consen 156 VAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAW 235 (495)
T ss_pred HHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhcc
Confidence 99999999999999999999999999999999998772 9999999999998874 566678999986320
Q ss_pred hcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHhhccCccchHhhhcChhhHHHHHHHHHHHHHHhhcchhhhhhchhc
Q psy15539 251 KKNRVKQAKESLQWFRGSEYDIDSEITDMQNSLEKERSDKVPLMQAFSTPAAKRGLLIGLGVMFIQQFGGINAVVFYTVK 330 (333)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 330 (333)
-...+|..-..++.+..+ .....++.+..++++.+++|..|. .++..++.....+.+.+|+|.
T Consensus 236 -fl~~~ek~~~~~~~~~~~-----------~~~~~~~~~~~~~~~a~~dp~vw~-----~~l~~~~~~lv~~~~~~~lpl 298 (495)
T KOG2533|consen 236 -FLTDEEKELVVERLRESP-----------SGGIENKFKWKGFKEALKDPGVWP-----FSLCYFFLKLVNYGFSYWLPL 298 (495)
T ss_pred -ccchHHHHHHHHHHHhcc-----------CCCcccccCHHHHHHHHhchhHHH-----HHHHHHHHhhccccHHHHHHH
Confidence 111111111111111000 000111135567889999995333 333344444455778899988
Q ss_pred ccC
Q psy15539 331 IFK 333 (333)
Q Consensus 331 ~~~ 333 (333)
+++
T Consensus 299 ~l~ 301 (495)
T KOG2533|consen 299 YLK 301 (495)
T ss_pred HHH
Confidence 763
No 32
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.86 E-value=2.4e-20 Score=171.27 Aligned_cols=173 Identities=13% Similarity=0.010 Sum_probs=135.2
Q ss_pred HHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q psy15539 72 LTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGW 151 (333)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 151 (333)
..+.+.......+....+..+|.+. + .|++..+.+++.+.+.+++.+++++.|+++||+|||++++++.++.+++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~p~l~-~---~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~ 107 (452)
T PRK11273 32 LGIFFGYAAYYLVRKNFALAMPYLV-E---QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVM 107 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHH-H---cCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHH
Confidence 3333333333333333445566554 4 38899999999999999999999999999999999999999999999998
Q ss_pred HHHHHHh----hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHH-HHHHHhHHH----HHH
Q psy15539 152 GLIIWSQ----SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGIL-FVYAVGSWA----SVY 222 (333)
Q Consensus 152 ~~~~~~~----~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~-~~~~~~~~~----~~~ 222 (333)
+++++.+ +++.+++.|++.|++.+..++.....+.|++|+++|++++++++.+..+|.. .+++++... +|+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~ 187 (452)
T PRK11273 108 LFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWH 187 (452)
T ss_pred HHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHH
Confidence 8887753 6778899999999999988888888899999999999999999999888864 445433222 899
Q ss_pred HHHHHHHHHHHHH-HHHhhcccCChHH
Q psy15539 223 GLSIICALLPIFF-VGLMLLMPESPQF 248 (333)
Q Consensus 223 ~~~~~~~~~~~~~-~~~~~~~~e~~~~ 248 (333)
+.|++.+++.++. ++..+++||+|+.
T Consensus 188 ~~f~i~~~~~~~~~~l~~~~~~~~~~~ 214 (452)
T PRK11273 188 AALYMPAFAAILVALFAFAMMRDTPQS 214 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCHhh
Confidence 9999888776654 4555677887653
No 33
>KOG1330|consensus
Probab=99.86 E-value=6.9e-23 Score=178.23 Aligned_cols=177 Identities=16% Similarity=0.119 Sum_probs=158.5
Q ss_pred HHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q psy15539 67 QYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVP 146 (333)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 146 (333)
.+..+.+.++.+.+...+.+.+....+...+. +|++++..|++.+.+.+.+++++|++|+++||+.||+++.+|.++
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~---fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTY---FNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHh---cCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 34556666777777778888877777777777 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HH
Q psy15539 147 TLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SV 221 (333)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~ 221 (333)
++++.++++++..+|++.++|.+.|+|.+...++.+++++|.+|..+|++++++++.+..+|..+|.+.+..+ .|
T Consensus 108 W~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~W 187 (493)
T KOG1330|consen 108 WTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWW 187 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccce
Confidence 9999999999999999999999999999999999999999999999999999999999999999888887766 59
Q ss_pred HHHHHHHHHHHHHHH-HHhhcccCCh
Q psy15539 222 YGLSIICALLPIFFV-GLMLLMPESP 246 (333)
Q Consensus 222 ~~~~~~~~~~~~~~~-~~~~~~~e~~ 246 (333)
|+.|+..+++.++.. +.+++.+|+.
T Consensus 188 r~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 188 RWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred EEEEEeehHHHHHHHHHHHhhccCcc
Confidence 999999999998754 4455666664
No 34
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.86 E-value=1.3e-20 Score=169.42 Aligned_cols=165 Identities=17% Similarity=0.155 Sum_probs=144.7
Q ss_pred hhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q psy15539 79 FIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ 158 (333)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 158 (333)
+..........+.+|.+.++ +|.++.+.+++.+++.++..+++++.|+++||+|||+.+..+.++.+++.+++.+.+
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~---~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 91 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAAD---LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN 91 (385)
T ss_pred HHHHHHHHHhcccHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 34445556667778888888 999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q psy15539 159 SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIF 234 (333)
Q Consensus 159 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~ 234 (333)
+++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+++.+++++ +|++.+++.+++.++
T Consensus 92 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~ 171 (385)
T TIGR00710 92 NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGIL 171 (385)
T ss_pred cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999888766 799988887777665
Q ss_pred HHHH-hhcccCCh
Q psy15539 235 FVGL-MLLMPESP 246 (333)
Q Consensus 235 ~~~~-~~~~~e~~ 246 (333)
..+. .++.||++
T Consensus 172 ~~~~~~~~~~~~~ 184 (385)
T TIGR00710 172 LSALIFFILPETL 184 (385)
T ss_pred HHHHHHHhCCCCC
Confidence 4433 44566653
No 35
>PRK15075 citrate-proton symporter; Provisional
Probab=99.85 E-value=4.1e-20 Score=168.93 Aligned_cols=160 Identities=22% Similarity=0.243 Sum_probs=131.1
Q ss_pred HHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHH-HHH-----HHHHHHHHHHHHHhhhccchhHHHHH
Q psy15539 69 MAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIG-SSM-----ALGAVFGSPVVGNLVDTVGRKNTMLL 142 (333)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~i~~~~~g~l~dr~Grr~~l~~ 142 (333)
.....+.++.+...++...++...|.+.++ ++.++.+.+.+. +.. .++..+++++.|+++||+|||+.++.
T Consensus 15 ~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 91 (434)
T PRK15075 15 RAILRVTSGNFLEMFDFFLFGFYATAIAKT---FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIV 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHH
Confidence 356777778888999999999999999998 888777654432 222 23335789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhHH--------HHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHH
Q psy15539 143 LAVPTLVGWGLIIWSQSVI--------MFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYA 214 (333)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~ 214 (333)
+.++.++++++++++++++ .++++|++.|++.+...+....+++|++|+++|++++++...+..+|..+++.
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~ 171 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAAL 171 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998876 46889999999999999888999999999999999999988777777666666
Q ss_pred HhHH------------HHHHHHHHHHHHH
Q psy15539 215 VGSW------------ASVYGLSIICALL 231 (333)
Q Consensus 215 ~~~~------------~~~~~~~~~~~~~ 231 (333)
++.. .+||+.|++..+.
T Consensus 172 ~g~~l~~~~~~~~~~~~gWr~~f~~~~~~ 200 (434)
T PRK15075 172 LGYLLNQWLSPAQMAEWGWRIPFLIGCLI 200 (434)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHH
Confidence 5543 2899999875443
No 36
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.85 E-value=1.2e-20 Score=167.40 Aligned_cols=167 Identities=23% Similarity=0.326 Sum_probs=141.4
Q ss_pred HHhhhhhhhccchhhhh-hhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q psy15539 77 GGFIMGTILGWTSPAGD-RLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLII 155 (333)
Q Consensus 77 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 155 (333)
..+..........+.+| .+.++ +|.+..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 4 AFFLSGFGFSIISPALPLYLAEE---LGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCC---STTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh
Confidence 33444455555666777 67777 999999999999999999999999999999999999999999999999966666
Q ss_pred HHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHH
Q psy15539 156 WSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALL 231 (333)
Q Consensus 156 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~ 231 (333)
++++.+.++++|++.|++.+...+....++.|++|+++|+++.++.+.+..+|.++++.+++++ +|++.+++.+++
T Consensus 81 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~ 160 (352)
T PF07690_consen 81 FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAIL 160 (352)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHH
T ss_pred hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccch
Confidence 6677779999999999999999999999999999999999999999999999999999998877 899999999888
Q ss_pred HHHHHHH-hhcccCCh
Q psy15539 232 PIFFVGL-MLLMPESP 246 (333)
Q Consensus 232 ~~~~~~~-~~~~~e~~ 246 (333)
.++..+. .+++++++
T Consensus 161 ~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 161 SLIAAILFILFLPEPP 176 (352)
T ss_dssp HHHHHHHHHCCC---S
T ss_pred hhhhhhhHhhhhhhcc
Confidence 8876553 34555443
No 37
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.85 E-value=5.6e-20 Score=163.14 Aligned_cols=159 Identities=16% Similarity=0.107 Sum_probs=139.8
Q ss_pred hccchhhhhhhhcCCcccccCchh-HHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHH
Q psy15539 85 LGWTSPAGDRLIAGEYPFLVTESD-LSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMF 163 (333)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 163 (333)
........|.+.++ +|++..+ .|.+.++++.+++++.++.|+++||+|.|+++.++.+.+++.+++.+++.++..+
T Consensus 42 R~n~s~a~p~L~~e---lglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L 118 (511)
T TIGR00806 42 RPGESFITPYLLTV---LNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHM 118 (511)
T ss_pred hchHHHHHHHHHHH---cCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555567778777 9999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH---HHHHHH---HHHHHHHHHHHH
Q psy15539 164 CAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA---SVYGLS---IICALLPIFFVG 237 (333)
Q Consensus 164 ~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~ 237 (333)
.+.|++.|++.|... ....++..++|+++|+++.++...+..+|.+++++++.++ +|+... ++......++++
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~ 197 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVF 197 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999998877 666533 344444455666
Q ss_pred HhhcccCChH
Q psy15539 238 LMLLMPESPQ 247 (333)
Q Consensus 238 ~~~~~~e~~~ 247 (333)
..+++|..++
T Consensus 198 ~a~~LP~~~~ 207 (511)
T TIGR00806 198 LALFLKRPKR 207 (511)
T ss_pred HHHhCCCCch
Confidence 7778886554
No 38
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.85 E-value=4.4e-20 Score=165.98 Aligned_cols=171 Identities=20% Similarity=0.263 Sum_probs=148.7
Q ss_pred HHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q psy15539 72 LTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGW 151 (333)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 151 (333)
....+..+..+.......+.+|.+.++ +|.+..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~l~~~~~~---~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 6 LSLALGTFGLGMAEFGIMGVLTELAHD---VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred HHHHHHHHHHHhhHHHHHhChHHHHHH---cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 334445555666666777788989888 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHH
Q psy15539 152 GLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSII 227 (333)
Q Consensus 152 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~ 227 (333)
++++++++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++++ +||+.|++
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~ 162 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLL 162 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHH
Confidence 99999999999999999999999988888888999999999999999999999999999998887766 89999999
Q ss_pred HHHHHHHHHH-HhhcccCC
Q psy15539 228 CALLPIFFVG-LMLLMPES 245 (333)
Q Consensus 228 ~~~~~~~~~~-~~~~~~e~ 245 (333)
.+++.++..+ ..+++||.
T Consensus 163 ~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred HHHHHHHHHHHHHHhCCCC
Confidence 8887665443 34456765
No 39
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.85 E-value=5.2e-20 Score=170.70 Aligned_cols=173 Identities=17% Similarity=0.228 Sum_probs=153.0
Q ss_pred HHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q psy15539 71 ALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVG 150 (333)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 150 (333)
...+.++.+...++....+..+|.+.++ +|.+..+.+++.+.+.++..++.++.|+++||+|||+.++++.++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGD---LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 3445556666777777888889999998 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHH
Q psy15539 151 WGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSI 226 (333)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~ 226 (333)
.+++++++++..++++|++.|++.+...+...+++.|++|+++|+++.+++..+..+|..++|.+++++ +|++.|+
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 999999999999999999999999999999999999999999999999999999999999999998877 8999998
Q ss_pred HHHHHHHHHHH-HhhcccCCh
Q psy15539 227 ICALLPIFFVG-LMLLMPESP 246 (333)
Q Consensus 227 ~~~~~~~~~~~-~~~~~~e~~ 246 (333)
+.+.++++..+ ..+++||++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCcc
Confidence 88777665443 344566643
No 40
>PRK03699 putative transporter; Provisional
Probab=99.85 E-value=7.5e-20 Score=165.17 Aligned_cols=169 Identities=11% Similarity=0.097 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy15539 68 YMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPT 147 (333)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 147 (333)
++..+.+.+..+..+......+..+|.+.++ +|++.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~---~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGMVMGPIAEY---FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4445555666667777777778888999888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHH
Q psy15539 148 LVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVY 222 (333)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~ 222 (333)
+++.+++.++++++.++++|++.|++.+...+....++.|++|+++|+.+.+..+....+|..++|.+.+++ +||
T Consensus 83 ~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~ 162 (394)
T PRK03699 83 ILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWY 162 (394)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 999999999999999999999999999988888899999999999999999988888888888888776554 799
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy15539 223 GLSIICALLPIFFVGLM 239 (333)
Q Consensus 223 ~~~~~~~~~~~~~~~~~ 239 (333)
+.+++.+++.++..+..
T Consensus 163 ~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 163 WVYACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988877766554433
No 41
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.85 E-value=6.3e-20 Score=165.53 Aligned_cols=147 Identities=14% Similarity=0.053 Sum_probs=130.2
Q ss_pred hccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy15539 85 LGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFC 164 (333)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (333)
....++.+|.+.++ +|+|..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++++++++..++
T Consensus 25 ~~~~~~~lp~i~~~---~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll 101 (393)
T PRK09705 25 LTSVGPLLPQLRQA---SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLL 101 (393)
T ss_pred hhccchhHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHH
Confidence 35667889999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHH
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVYGLSIICALLPIFF 235 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 235 (333)
++|++.|++.+...+....++.+++| ++|+++++++..+..+|..+++.+++++ +||..+.+.++..++.
T Consensus 102 ~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 102 SSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997 7899999998887777777777776654 6888776655554433
No 42
>KOG0252|consensus
Probab=99.84 E-value=1.1e-20 Score=164.11 Aligned_cols=190 Identities=21% Similarity=0.153 Sum_probs=155.9
Q ss_pred cchhHHHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcc-----cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy15539 61 KAKRITQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYP-----FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVG 135 (333)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G 135 (333)
....|++...+.++.++.+..+|+...++...|.+....+. -++++...+.+.++..+|.++|++++|++.||+|
T Consensus 33 ~g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~G 112 (538)
T KOG0252|consen 33 EGLQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFG 112 (538)
T ss_pred cchhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 34567889999999999999999999888887766554211 1255667788899999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHh-------hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHH
Q psy15539 136 RKNTMLLLAVPTLVGWGLIIWSQ-------SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAG 208 (333)
Q Consensus 136 rr~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g 208 (333)
||+++...++++.++++++++.. -+.++.+.|+++|+|.|+-||+..+..+|....+.||...+.....++.|
T Consensus 113 RK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~G 192 (538)
T KOG0252|consen 113 RKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFG 192 (538)
T ss_pred chhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchh
Confidence 99999999999999999777642 35778889999999999999999999999999999999888766555555
Q ss_pred HHHHHHHhHHH-------------------HHHHHHHHHHHHHHHHHHHhhcccCChHHHH
Q psy15539 209 ILFVYAVGSWA-------------------SVYGLSIICALLPIFFVGLMLLMPESPQFHL 250 (333)
Q Consensus 209 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 250 (333)
.+.|.+++..+ -||..+.+.++++++.+...+.+||++++..
T Consensus 193 ilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~a 253 (538)
T KOG0252|consen 193 ILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTA 253 (538)
T ss_pred HhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHH
Confidence 55555443322 5999999988888888888888999998764
No 43
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.84 E-value=1.1e-19 Score=167.78 Aligned_cols=162 Identities=19% Similarity=0.104 Sum_probs=129.6
Q ss_pred HhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q psy15539 78 GFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS 157 (333)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 157 (333)
.+..........+.+|.+.++ +|++..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++++++.++++++
T Consensus 45 ~~~~~~~~~~~~~~~~~l~~~---~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~ 121 (476)
T PLN00028 45 FFTCFVSTFAAAPLLPIIRDN---LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV 121 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh
Confidence 333333444556678888888 99999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHH----HHHhHH---------HHHHHH
Q psy15539 158 QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFV----YAVGSW---------ASVYGL 224 (333)
Q Consensus 158 ~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~----~~~~~~---------~~~~~~ 224 (333)
++...++++|++.|++.+... ....+++|++|+++||+++++.+....+|..++ +.+... .+||+.
T Consensus 122 ~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~ 200 (476)
T PLN00028 122 SSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIA 200 (476)
T ss_pred cCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHH
Confidence 999999999999999887654 455678999999999999999875555555544 433221 379999
Q ss_pred HHHHHHHHHHHHHHhhccc
Q psy15539 225 SIICALLPIFFVGLMLLMP 243 (333)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~ 243 (333)
|++.+++.++..+..++++
T Consensus 201 f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 201 FFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 9998888776554444444
No 44
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.84 E-value=1.2e-19 Score=163.50 Aligned_cols=200 Identities=13% Similarity=0.031 Sum_probs=146.7
Q ss_pred ccchhhhhhhhc-CCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH-----hh
Q psy15539 86 GWTSPAGDRLIA-GEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS-----QS 159 (333)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~ 159 (333)
...++..+.+.+ + +|++.++.+++.++..+++.++.++.|++.||+|.|+++.++.+++++.+++.+++ ++
T Consensus 51 ~~~~~l~~~~~~~~---~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s 127 (462)
T PRK15034 51 MLFSAVTVNLNKIG---FNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTP 127 (462)
T ss_pred HHHHHHHHHhhhhh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCC
Confidence 344555666655 5 99999999999999999999999999999999999999999999999999999887 79
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHH----HHHHHHhH------------------
Q psy15539 160 VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGI----LFVYAVGS------------------ 217 (333)
Q Consensus 160 ~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~----~~~~~~~~------------------ 217 (333)
++.+++.|++.|++ +..++.....+++++|+++||++.|+......+|. .++|.+..
T Consensus 128 ~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~ 206 (462)
T PRK15034 128 FGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGS 206 (462)
T ss_pred HHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 99999999999998 77889999999999999999999999854444444 44444331
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-cccCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHhhccCccchHhh
Q psy15539 218 WASVYGLSIICALLPIFFVGLML-LMPESPQFHLKKNRVKQAKESLQWFRGSEYDIDSEITDMQNSLEKERSDKVPLMQA 296 (333)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (333)
..+|+...++..++.++..+..+ +.++.+. ++.......+.
T Consensus 207 ~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~--------------------------------------~~~~~~~~~~v 248 (462)
T PRK15034 207 VMSLANAAWIWVPLLAIATIAAWSGMNDIAS--------------------------------------SRASIADQLPV 248 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--------------------------------------cccCHHHHHHH
Confidence 11367666666666655444443 3333221 00012234568
Q ss_pred hcChhhHHHHHHHHHHHHHHhhcchhhhhhchhccc
Q psy15539 297 FSTPAAKRGLLIGLGVMFIQQFGGINAVVFYTVKIF 332 (333)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 332 (333)
+|+|+.|. +++..++.++++..+.+|.|+++
T Consensus 249 lk~~~~Wl-----lslly~~tFG~fvg~s~~lp~~~ 279 (462)
T PRK15034 249 LQRLHLWL-----LSLLYLATFGSFIGFSAGFAMLA 279 (462)
T ss_pred hCCCchhH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 88886332 33334556666677787887764
No 45
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.84 E-value=9.6e-20 Score=162.33 Aligned_cols=159 Identities=14% Similarity=0.009 Sum_probs=138.5
Q ss_pred hhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q psy15539 79 FIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ 158 (333)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 158 (333)
+..........+.+|.+..+ .+.+..+.+++.+++.++..++.++.|+++||+|||++++.+.++.+++.++..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~---~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 85 (365)
T TIGR00900 9 LISLIGTAITQVALPLYVLA---GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVA 85 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445555667888887 899999999999999999999999999999999999999999999988888888877
Q ss_pred -----hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHH
Q psy15539 159 -----SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICA 229 (333)
Q Consensus 159 -----~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~ 229 (333)
+.+.++++|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|.++++.+++++ +|++.+++.+
T Consensus 86 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~ 165 (365)
T TIGR00900 86 LLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDA 165 (365)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988776 8999988877
Q ss_pred HHHHHHHHHhh
Q psy15539 230 LLPIFFVGLML 240 (333)
Q Consensus 230 ~~~~~~~~~~~ 240 (333)
+..++..+..+
T Consensus 166 ~~~~~~~~~~~ 176 (365)
T TIGR00900 166 VGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHH
Confidence 76665544443
No 46
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.84 E-value=1.1e-20 Score=178.86 Aligned_cols=167 Identities=15% Similarity=0.162 Sum_probs=143.1
Q ss_pred HHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q psy15539 76 IGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLII 155 (333)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 155 (333)
+..+......++.+..++.+.++ ++++..+.|++.+.+.+++.++.++.++++||+|||+.+.++.+++++++++++
T Consensus 40 ~~~~~~~~~~g~~~~~l~~iek~---F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~a 116 (633)
T TIGR00805 40 CAQLQGLLYNGLVNSSLTTIERR---FKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLS 116 (633)
T ss_pred HHHHHHHHHHHHHHhhchhhhhh---hCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHh
Confidence 34444455567777888999888 999999999999999999999999999999999999999999999999999887
Q ss_pred HHh---------------------------------------------------hHHHHHHHHHHHhhhhhhhhhhhhhh
Q psy15539 156 WSQ---------------------------------------------------SVIMFCAGRLLTGFGGGSFAVVVPMY 184 (333)
Q Consensus 156 ~~~---------------------------------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~ 184 (333)
+.+ .+..++++|++.|+|.+..++...++
T Consensus 117 lphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~ 196 (633)
T TIGR00805 117 LPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISY 196 (633)
T ss_pred ChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchh
Confidence 652 24567789999999999999999999
Q ss_pred hcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH--------------------------HHHHHHHHHHHHHHHHHHH
Q psy15539 185 TAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA--------------------------SVYGLSIICALLPIFFVGL 238 (333)
Q Consensus 185 ~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~ 238 (333)
+.|++|+++|+.++++++.+..+|.++++++++++ +|+..|++.+++.++..+.
T Consensus 197 i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~ 276 (633)
T TIGR00805 197 IDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP 276 (633)
T ss_pred hhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998887654 2777788888877776555
Q ss_pred hhcccCC
Q psy15539 239 MLLMPES 245 (333)
Q Consensus 239 ~~~~~e~ 245 (333)
++++|++
T Consensus 277 l~~~p~~ 283 (633)
T TIGR00805 277 FFFFPKA 283 (633)
T ss_pred HHhCccc
Confidence 6666654
No 47
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.84 E-value=2.5e-19 Score=162.42 Aligned_cols=179 Identities=18% Similarity=0.107 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q psy15539 65 ITQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLA 144 (333)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 144 (333)
.+.+...+.+.+..+...+....+.+.+|.+.++ ++.+..+.++..+.+.+++.++.++.|+++||+|||+++.++.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~ 85 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVED---FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGV 85 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 3445555666666666666667777778888888 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----H
Q psy15539 145 VPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----S 220 (333)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~ 220 (333)
++.+++.+++.++++++.+++.|++.|++.+...+...+.+.|.+|+++|++..++......+|..++|.+++++ +
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 86 AFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 999999999999999999999999999999988888899999999999999999988877888888888887765 8
Q ss_pred HHHHHHHHHHHHHHHHHH-hhcccCCh
Q psy15539 221 VYGLSIICALLPIFFVGL-MLLMPESP 246 (333)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~-~~~~~e~~ 246 (333)
|++.+++.+++.++..+. .+..||++
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999998887777665443 34567654
No 48
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.84 E-value=5.3e-19 Score=164.48 Aligned_cols=180 Identities=20% Similarity=0.177 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q psy15539 66 TQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAV 145 (333)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 145 (333)
+++.....+.+..+...++.....+..|.+.++ +|.+..+.+++.+.+.+++.++.++.|+++||+|||+.++++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 93 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGE---FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 344455566666667777777777888988888 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HH
Q psy15539 146 PTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SV 221 (333)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~ 221 (333)
+.+++.+++.+.++++.++++|++.|++.++.++....++.|++|+++|+++.++...+..+|..+++.+.+++ +|
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 173 (496)
T PRK03893 94 LFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW 173 (496)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988776 89
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCChHH
Q psy15539 222 YGLSIICALLPIFFVGLMLLMPESPQF 248 (333)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~e~~~~ 248 (333)
++.+++.++..++.++....+||++++
T Consensus 174 ~~~f~~~~~~~~~~~~~~~~~p~~~~~ 200 (496)
T PRK03893 174 RALFFIGILPIIFALWLRKNLPEAEDW 200 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 998887555444444444456776544
No 49
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.83 E-value=7.8e-21 Score=170.15 Aligned_cols=165 Identities=17% Similarity=0.084 Sum_probs=142.3
Q ss_pred hhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q psy15539 80 IMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQS 159 (333)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 159 (333)
....+....+...|.+.++ +|.+..+.+++.++..++..++.++.|+++||+|||++++++.++.+++.+++.++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~---~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 82 (379)
T TIGR00881 6 AYYLVRKNFALAMPYLVEE---IGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTS 82 (379)
T ss_pred HHHHhHHhhhhhhHHHHHH---hCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhh
Confidence 3344555666667888887 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHH-HhHHH----HHHHHHHHHHHHHHH
Q psy15539 160 VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYA-VGSWA----SVYGLSIICALLPIF 234 (333)
Q Consensus 160 ~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~-~~~~~----~~~~~~~~~~~~~~~ 234 (333)
++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++. ++..+ +|++.+++.+++.++
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAII 162 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999883 44433 899998888777665
Q ss_pred H-HHHhhcccCChH
Q psy15539 235 F-VGLMLLMPESPQ 247 (333)
Q Consensus 235 ~-~~~~~~~~e~~~ 247 (333)
. ++..++.+|+|+
T Consensus 163 ~~~~~~~~~~~~~~ 176 (379)
T TIGR00881 163 VSLICFLLLRDSPQ 176 (379)
T ss_pred HHHHHheeeCCCcc
Confidence 4 444556676653
No 50
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.83 E-value=1.9e-19 Score=162.56 Aligned_cols=164 Identities=16% Similarity=0.182 Sum_probs=141.1
Q ss_pred hhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q psy15539 80 IMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQS 159 (333)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 159 (333)
..........+.+|.+.++ +|.++.+.+++.+.+.++..++.++.|+++||+|||+.+.++.++.+++.+++.+.++
T Consensus 19 ~~~~~~~~~~p~~~~i~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~ 95 (394)
T PRK11652 19 VGQMAQTIYVPAIADMARD---LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHS 95 (394)
T ss_pred HHHHHHHHHhccHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHcc
Confidence 3334445566678888888 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHH
Q psy15539 160 VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFF 235 (333)
Q Consensus 160 ~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 235 (333)
++.+++.|++.|++.+...+....+..|.++.++|+.+.+..+.+..++..++|.+++++ +|++.+++.++..++.
T Consensus 96 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~ 175 (394)
T PRK11652 96 LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGV 175 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 999999999999998888888888889999999999999999999999999999888766 7999998887766554
Q ss_pred -HHHhhcccCCh
Q psy15539 236 -VGLMLLMPESP 246 (333)
Q Consensus 236 -~~~~~~~~e~~ 246 (333)
++..++.||++
T Consensus 176 ~~~~~~~~~~~~ 187 (394)
T PRK11652 176 TFSMARWMPETR 187 (394)
T ss_pred HHHHHHhCCccC
Confidence 33445667754
No 51
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.83 E-value=1.3e-19 Score=165.85 Aligned_cols=172 Identities=14% Similarity=0.042 Sum_probs=137.4
Q ss_pred HHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q psy15539 72 LTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGW 151 (333)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 151 (333)
....+................|.+. + .|.++.+.+++.+++.++..++.++.|+++||+|||+.+.++.++.+++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~p~~~-~---~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~ 105 (438)
T TIGR00712 30 LGIFFGYAAYYLVRKNFALAMPYLV-E---QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVM 105 (438)
T ss_pred HHHHHHHHHHHHHhccHHhhhHHHH-H---cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHH
Confidence 3333333443333444444556554 5 68999999999999999999999999999999999999999999999888
Q ss_pred HHHHHH----hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHH
Q psy15539 152 GLIIWS----QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVY 222 (333)
Q Consensus 152 ~~~~~~----~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~ 222 (333)
+++.+. .+...+++.|++.|++.+..++.....+.|++|+++|++++++.+.+..+|..+++.+.... +||
T Consensus 106 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~ 185 (438)
T TIGR00712 106 LLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWH 185 (438)
T ss_pred HHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhH
Confidence 877654 46677888899999999988888889999999999999999999999999988887765432 799
Q ss_pred HHHHHHHHHHHHH-HHHhhcccCChH
Q psy15539 223 GLSIICALLPIFF-VGLMLLMPESPQ 247 (333)
Q Consensus 223 ~~~~~~~~~~~~~-~~~~~~~~e~~~ 247 (333)
..|++.+++.++. ++..+++||+|+
T Consensus 186 ~~f~~~~~~~~i~~~~~~~~~~~~~~ 211 (438)
T TIGR00712 186 AALYFPAICAIIVALFAFAMMRDTPQ 211 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 9999988877664 445556788764
No 52
>PRK11043 putative transporter; Provisional
Probab=99.83 E-value=3.3e-19 Score=161.39 Aligned_cols=160 Identities=17% Similarity=0.131 Sum_probs=138.6
Q ss_pred hhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy15539 83 TILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIM 162 (333)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (333)
.....+.+.+|.+.++ +|.++.+.+++.+++.++..++++++|+++||+|||+.+..+.++.+++.+++.++++++.
T Consensus 20 ~~~~~~~p~~~~i~~~---~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (401)
T PRK11043 20 LATDMYLPAFKAIQAD---LQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQ 96 (401)
T ss_pred HHHHHHHhhHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 3455666777888887 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH
Q psy15539 163 FCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGL 238 (333)
Q Consensus 163 ~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 238 (333)
+++.|++.|++.+...+...+++.|++|+++++...+.......+|..++|.+++++ +|++.+++.+++.++..+.
T Consensus 97 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 176 (401)
T PRK11043 97 LLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILP 176 (401)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 999999999998888887888899999999999988888888888888888888766 8999998888777766555
Q ss_pred hhcccCC
Q psy15539 239 MLLMPES 245 (333)
Q Consensus 239 ~~~~~e~ 245 (333)
.++++|+
T Consensus 177 ~~~~~~~ 183 (401)
T PRK11043 177 TLRLKPS 183 (401)
T ss_pred HHHcCCC
Confidence 5555544
No 53
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.83 E-value=4.7e-19 Score=160.36 Aligned_cols=166 Identities=15% Similarity=0.039 Sum_probs=143.3
Q ss_pred HHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q psy15539 71 ALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVG 150 (333)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 150 (333)
...++...+..++..+..++.+|.++++ +|.++.+.+++.+.+.+++.+++++.|++.||+|||+.++++.++++++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~---~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g 81 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQA---FTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALG 81 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 3445556666777777888889999888 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH---HhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH--------
Q psy15539 151 WGLIIW---SQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-------- 219 (333)
Q Consensus 151 ~~~~~~---~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-------- 219 (333)
.+++.. .++++.+++.|++.|+|.|...+....++.+..|+++|++..++.+....+|..+++.++..+
T Consensus 82 ~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~ 161 (410)
T TIGR00885 82 AFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQ 161 (410)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 888654 357899999999999999999999999999999999999999999999999999888886533
Q ss_pred ----------------------HHHHHHHHHHHHHHHHHHHh
Q psy15539 220 ----------------------SVYGLSIICALLPIFFVGLM 239 (333)
Q Consensus 220 ----------------------~~~~~~~~~~~~~~~~~~~~ 239 (333)
+||++|++.+++.++..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 162 SQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 49999988887766544333
No 54
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.83 E-value=3.6e-19 Score=160.67 Aligned_cols=159 Identities=18% Similarity=0.184 Sum_probs=139.4
Q ss_pred hccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy15539 85 LGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFC 164 (333)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (333)
.....+.+|.+.++ +|.+..+.++..+.+.++..+++++.|+++||+|||+.++++.++.+++.+++..+++.+.++
T Consensus 19 ~~~~~~~lp~~~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~ 95 (392)
T PRK10473 19 IDMYLVGLPRIAAD---LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFL 95 (392)
T ss_pred HHHHhhhHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 33444668888888 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHH-HHh
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFV-GLM 239 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~ 239 (333)
+.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..++|.++..+ +|++.+++.+++.++.. +..
T Consensus 96 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 175 (392)
T PRK10473 96 AGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSL 175 (392)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988999999999999999999999999999899999999887765 79998888877766543 344
Q ss_pred hcccCCh
Q psy15539 240 LLMPESP 246 (333)
Q Consensus 240 ~~~~e~~ 246 (333)
+++||++
T Consensus 176 ~~~~~~~ 182 (392)
T PRK10473 176 FILKETR 182 (392)
T ss_pred HHcCCCC
Confidence 5667653
No 55
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.83 E-value=1.1e-19 Score=162.65 Aligned_cols=157 Identities=15% Similarity=0.087 Sum_probs=135.0
Q ss_pred hccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy15539 85 LGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFC 164 (333)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (333)
.....+..|.+.++ +|++..+.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.++++++++++.++
T Consensus 19 ~~~~~~~~~~~~~~---~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (377)
T TIGR00890 19 VYTWTLLAPPLGRY---FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALY 95 (377)
T ss_pred HhhhhhHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 33456678888888 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH-h
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGL-M 239 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~ 239 (333)
++|++.|++.+..++.....+.+++| ++|+++.++...+..+|..+++++.... +||+.+++.+++.++..+. .
T Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 96 LTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred HHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888887 5799999999999999987765555443 7999999988877765444 3
Q ss_pred hcccCC
Q psy15539 240 LLMPES 245 (333)
Q Consensus 240 ~~~~e~ 245 (333)
++++++
T Consensus 175 ~~~~~~ 180 (377)
T TIGR00890 175 FLIGYP 180 (377)
T ss_pred HheecC
Confidence 445544
No 56
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.82 E-value=1.4e-18 Score=156.79 Aligned_cols=149 Identities=16% Similarity=0.205 Sum_probs=125.1
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTG 171 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 171 (333)
.+.+..+ ++.++.+.+++.+.+.+++.++.+++|+++||+|||++++++.++.+++++++.+..+. ++.|+++|
T Consensus 26 ~~~~~~~---~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G 99 (393)
T PRK11195 26 AIALLKE---LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVG 99 (393)
T ss_pred HHHHHHH---cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 4445566 88888899999999999999999999999999999999999999999888887776654 67899999
Q ss_pred hhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHhhcccCCh
Q psy15539 172 FGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA---SVYGLSIICALLPIFFVGLMLLMPESP 246 (333)
Q Consensus 172 ~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e~~ 246 (333)
++.+...|...+++.|++|+++|+++.++.+....+|..++|.+++++ .|+..+.+.+...++.++..+++||++
T Consensus 100 ~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~ 177 (393)
T PRK11195 100 IGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999999999999999999999999999887 344444444443333444456678765
No 57
>PRK10133 L-fucose transporter; Provisional
Probab=99.82 E-value=1.9e-18 Score=157.69 Aligned_cols=148 Identities=12% Similarity=0.071 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q psy15539 67 QYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVP 146 (333)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 146 (333)
....+....+..+..+..........|.+.++ +|.++.+.+++.+.+.+++.+++++.|++.||+|||+++.++.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~---~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~ 100 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQA---FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFL 100 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 34444555566666677777777889999887 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH---HHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhH
Q psy15539 147 TLVGWGLI---IWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGS 217 (333)
Q Consensus 147 ~~~~~~~~---~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~ 217 (333)
++++++++ ..++++..++++|++.|++.|...+..+.++.|+.|+++|...+++.+..+.+|..+++.++.
T Consensus 101 ~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999875 457899999999999999999999999999999877777777888888888888888887753
No 58
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.81 E-value=5.9e-19 Score=157.65 Aligned_cols=159 Identities=15% Similarity=0.044 Sum_probs=125.8
Q ss_pred hhccchhhhhh-hhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh-hHH
Q psy15539 84 ILGWTSPAGDR-LIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ-SVI 161 (333)
Q Consensus 84 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~ 161 (333)
......+..|. +.++ +|++..+.+++.+++.+++++++++.|+++||+|||+.++++.++.+++.+++.+++ +++
T Consensus 16 ~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~ 92 (366)
T TIGR00886 16 VWFAFSPLAVQMIKDD---LGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYS 92 (366)
T ss_pred HHHHhHHhhhHHHHHH---hCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 34455667785 6666 999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH--------------HHHHHHH-
Q psy15539 162 MFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA--------------SVYGLSI- 226 (333)
Q Consensus 162 ~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~--------------~~~~~~~- 226 (333)
.+++.|++.|++.+ ..+....+++|++|+++|+++.++......+|..+++.++..+ +|++.++
T Consensus 93 ~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 93 VLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 99999999999865 4566788999999999999999998855555555554444322 5888883
Q ss_pred HHHHHHHH-HHHHhhcccCCh
Q psy15539 227 ICALLPIF-FVGLMLLMPESP 246 (333)
Q Consensus 227 ~~~~~~~~-~~~~~~~~~e~~ 246 (333)
..+++..+ .++..++.+|+|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~ 192 (366)
T TIGR00886 172 VPAGILLLPALLIFFVGADTP 192 (366)
T ss_pred HHHHHHHHHHHHHHHhcccCC
Confidence 33444333 333444556655
No 59
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.81 E-value=4.6e-19 Score=159.05 Aligned_cols=159 Identities=21% Similarity=0.263 Sum_probs=140.9
Q ss_pred hccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy15539 85 LGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFC 164 (333)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (333)
.....+.+|.+.++ +|.++.+.+++.+++.++..++.++.|+++||+|||+.+..+.++.+++.+++.+.++++.++
T Consensus 7 ~~~~~p~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 83 (377)
T PRK11102 7 IDMYLPALPVIAAD---FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLI 83 (377)
T ss_pred HHHHhccHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 34555778888888 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHH-HHh
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFV-GLM 239 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~ 239 (333)
++|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++.+++++ +|++.+++.+++.++.. +..
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999899999999999999999999999999999999999888766 89999888777776643 344
Q ss_pred hcccCCh
Q psy15539 240 LLMPESP 246 (333)
Q Consensus 240 ~~~~e~~ 246 (333)
++.||++
T Consensus 164 ~~~~~~~ 170 (377)
T PRK11102 164 FFIPETL 170 (377)
T ss_pred HhCCccC
Confidence 5667653
No 60
>PRK10504 putative transporter; Provisional
Probab=99.81 E-value=6e-18 Score=156.39 Aligned_cols=171 Identities=20% Similarity=0.164 Sum_probs=147.1
Q ss_pred HHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q psy15539 72 LTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGW 151 (333)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 151 (333)
+.+.++.+...++...+.+.+|.+.++ +|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~p~~~~~---~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 89 (471)
T PRK10504 13 WIVAFGFFMQSLDTTIVNTALPSMAQS---LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGS 89 (471)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH---hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 344455556666666777789999988 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHH
Q psy15539 152 GLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSII 227 (333)
Q Consensus 152 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~ 227 (333)
+++.++++.+.++++|++.|++.+...+...+++.|++|+++|+++.++......+|..++|.+++++ +|++.|++
T Consensus 90 ~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~ 169 (471)
T PRK10504 90 LFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLI 169 (471)
T ss_pred HHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999999988776 89999988
Q ss_pred HHHHHHHHHHHh-hcccCC
Q psy15539 228 CALLPIFFVGLM-LLMPES 245 (333)
Q Consensus 228 ~~~~~~~~~~~~-~~~~e~ 245 (333)
.....++..+.. ...|+.
T Consensus 170 ~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 170 NIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHHHHHhCCCc
Confidence 777665544333 344543
No 61
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.81 E-value=3.2e-18 Score=153.84 Aligned_cols=146 Identities=16% Similarity=0.139 Sum_probs=131.5
Q ss_pred HHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q psy15539 71 ALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVG 150 (333)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 150 (333)
+..+..+.+......+...+.+|.+.++ +|.+..+.|++.+.+.+++.+++++.|+++||+|||+.+..+.++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~---~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~ 84 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQ---EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAG 84 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555666777888889999998 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 151 WGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+++++++++++.++++|++.|++.+...+.....+.+..++++|+++++.+..+..+|..+++.+++.+
T Consensus 85 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 85 CAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999988888877888889999999999999999999999999998776
No 62
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.80 E-value=1.8e-18 Score=160.51 Aligned_cols=187 Identities=20% Similarity=0.200 Sum_probs=137.2
Q ss_pred hhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH-H--HHHhhHHHHHH
Q psy15539 89 SPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGL-I--IWSQSVIMFCA 165 (333)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~-~--~~~~~~~~~~~ 165 (333)
...+|.+.++ .+|.+..+.++......++..++.++.|+++||+|||+.+.++.++..++.+. . ..+.+...+++
T Consensus 270 ~~~~p~~l~~--~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (490)
T PRK10642 270 LTYMPSYLSH--NLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFA 347 (490)
T ss_pred HHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 3446777643 27888777888888889999999999999999999999988877654433332 2 22345667778
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHH-HHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHh
Q psy15539 166 GRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTY-FQLQCTAGILFVYAVGSWA-----SVYGLSIICALLPIFFVGLM 239 (333)
Q Consensus 166 ~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~-~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 239 (333)
++++.|++.+...+....++.|.+|++.||+++++ ++.+. +++.++|.+.+++ +|+.++++..+++++.++..
T Consensus 348 ~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~-~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~ 426 (490)
T PRK10642 348 GLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISV-LVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG 426 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 88888888777777778888999999999999997 55554 4456666666654 35666666666666666666
Q ss_pred hcccCChHHHHhc-----CCHHHHHHHHHHHhCCCcchHHHHHHHHH
Q psy15539 240 LLMPESPQFHLKK-----NRVKQAKESLQWFRGSEYDIDSEITDMQN 281 (333)
Q Consensus 240 ~~~~e~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (333)
+++||+|++..++ ++.+|+++.+++++. +.+.|.+++++
T Consensus 427 ~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~~---~~~~~~~~i~~ 470 (490)
T PRK10642 427 VTMKETANRPLKGATPAASDIQEAKEILVEHYD---NIEQKIDDIDQ 470 (490)
T ss_pred HHhccccCCCCCCccccccchhhHHHHhhcccc---cccchhhhccc
Confidence 7789999987754 888999999998873 34444444443
No 63
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.80 E-value=2.6e-18 Score=155.44 Aligned_cols=158 Identities=16% Similarity=0.188 Sum_probs=129.4
Q ss_pred HHHhhhhhhhccchhhhhhhh-cCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH
Q psy15539 76 IGGFIMGTILGWTSPAGDRLI-AGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLI 154 (333)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~ 154 (333)
+..+......+...+.+|.+. ++ +|.++.+.+++.+++.+++.+++++.|+++||+|||++++.+.++.+++.+.+
T Consensus 22 ~~~~~~~~~~~~~~~~l~~~i~~~---~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~ 98 (399)
T PRK05122 22 MFTFISYLTIGLPLAVLPGYVHDQ---LGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLY 98 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh---cCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHH
Confidence 333344445556667777754 55 89999999999999999999999999999999999999999999888776665
Q ss_pred HHH--------hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHH
Q psy15539 155 IWS--------QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVY 222 (333)
Q Consensus 155 ~~~--------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~ 222 (333)
.++ .++..+++.|++.|++.+...+....++.|++|+++|+++.++.+.+..+|.++++.+++++ +|+
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~ 178 (399)
T PRK05122 99 LLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLA 178 (399)
T ss_pred HHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHH
Confidence 443 25667899999999999999999889999999999999999998888888888888887766 788
Q ss_pred HHHHHHHHHHHHHH
Q psy15539 223 GLSIICALLPIFFV 236 (333)
Q Consensus 223 ~~~~~~~~~~~~~~ 236 (333)
..+++.++..++..
T Consensus 179 ~~~~~~~~~~~~~~ 192 (399)
T PRK05122 179 GLGLLIMLLALLGL 192 (399)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777665554433
No 64
>PRK12382 putative transporter; Provisional
Probab=99.79 E-value=5.6e-18 Score=152.92 Aligned_cols=145 Identities=14% Similarity=0.168 Sum_probs=121.3
Q ss_pred hhccchhhhhhhh-cCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH------
Q psy15539 84 ILGWTSPAGDRLI-AGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW------ 156 (333)
Q Consensus 84 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------ 156 (333)
..+...+.+|.+. ++ +|.|..+.+++.+++.+++.+++++.|+++||+|||++++.+.++.+++.+....
T Consensus 30 ~~~~~~p~l~~~l~~~---lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~ 106 (392)
T PRK12382 30 TVGLPLPVIPLFVHHD---LGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPV 106 (392)
T ss_pred HHHHHhhhhhHHHHHh---cCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 4455566777654 56 9999999999999999999999999999999999999999988877766543321
Q ss_pred --HhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHH
Q psy15539 157 --SQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICAL 230 (333)
Q Consensus 157 --~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~ 230 (333)
..+++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..++|.+++++ +|+..+.+..+
T Consensus 107 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 186 (392)
T PRK12382 107 SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMV 186 (392)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHH
Confidence 357888999999999999988888888999999999999999999999999999999888765 78776655444
Q ss_pred H
Q psy15539 231 L 231 (333)
Q Consensus 231 ~ 231 (333)
.
T Consensus 187 ~ 187 (392)
T PRK12382 187 L 187 (392)
T ss_pred H
Confidence 3
No 65
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.79 E-value=1.9e-18 Score=158.68 Aligned_cols=170 Identities=15% Similarity=0.034 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy15539 68 YMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPT 147 (333)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 147 (333)
|..+..+.+...........++...|.+.++ +|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVFFKELQQI---FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhhHHHHHHH---hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 4444444443332222233455667888888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHH-HHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHH
Q psy15539 148 LVGWGLIIWSQSVIMFCA-GRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVY 222 (333)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~-~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~ 222 (333)
++++++++++++++.+++ .|++.|++.+...+...+++.++++ ++|+++.++.+.+..+|..++|.+++++ +||
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr 173 (455)
T TIGR00892 95 SLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWR 173 (455)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChH
Confidence 999999999999888765 4689999988776777788889886 7899999999999999999998887765 899
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q psy15539 223 GLSIICALLPIFFVGLMLL 241 (333)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~ 241 (333)
+.|++.+++.++..+..++
T Consensus 174 ~~f~~~~~~~~~~~v~~~~ 192 (455)
T TIGR00892 174 GSFLILGGLLLHCCVCGAL 192 (455)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999988877655444433
No 66
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.79 E-value=7.5e-18 Score=152.30 Aligned_cols=156 Identities=15% Similarity=0.126 Sum_probs=134.5
Q ss_pred ccchhhhhhh-hcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy15539 86 GWTSPAGDRL-IAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFC 164 (333)
Q Consensus 86 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (333)
....+.++.+ .++ +|.+..+.|++.+...++..+.+++.|+++||+|||+++.++.++.+++.+++.+.++.+.++
T Consensus 27 ~~~~~~~~~~~~~~---~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~ 103 (400)
T PRK11646 27 FVVFPLISIRFVDQ---LGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLW 103 (400)
T ss_pred HHHHHHHHHHHHHH---hCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3344555554 455 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHH-HHhh
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA---SVYGLSIICALLPIFFV-GLML 240 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~ 240 (333)
+.|++.|++.+...+...+++.|++|+++|+++.++......+|..++|.+++++ +|++.|++.++..++.. +..+
T Consensus 104 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~ 183 (400)
T PRK11646 104 LSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAW 183 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888899999999999999999999999999999999998877 89998888777665543 3334
Q ss_pred cccC
Q psy15539 241 LMPE 244 (333)
Q Consensus 241 ~~~e 244 (333)
+.||
T Consensus 184 ~~~~ 187 (400)
T PRK11646 184 LLPA 187 (400)
T ss_pred hCCc
Confidence 4554
No 67
>PRK10054 putative transporter; Provisional
Probab=99.78 E-value=9.3e-18 Score=151.45 Aligned_cols=162 Identities=15% Similarity=0.070 Sum_probs=135.9
Q ss_pred hhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHH
Q psy15539 82 GTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVI 161 (333)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 161 (333)
....+...+.+|.+.++ ++|++..+.+++.+.+.++..+++++.|+++||+|||++++++.++.+++.++..+.++++
T Consensus 20 ~~g~~~~~~~l~~~l~~--~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
T PRK10054 20 TIGRGATLPFMTIYLSR--QYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVT 97 (395)
T ss_pred HHHHHHHHHHHHHHHHH--HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHH
Confidence 33344555556655543 2899999999999999999999999999999999999999999999999999889999998
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHH
Q psy15539 162 MFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA---SVYGLSIICALLPIFFVGL 238 (333)
Q Consensus 162 ~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 238 (333)
.+++++++.|.+.+...+...++..|..|+++|+++.++......+|.+++|.+++++ +|+..|++.+++.++.++.
T Consensus 98 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~ 177 (395)
T PRK10054 98 LVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVF 177 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHH
Confidence 8888899988888877888899999999999999999999999999999999998877 7888888877776665433
Q ss_pred -hhcccCC
Q psy15539 239 -MLLMPES 245 (333)
Q Consensus 239 -~~~~~e~ 245 (333)
.+++|++
T Consensus 178 ~~~~~~~~ 185 (395)
T PRK10054 178 IQIWVQRS 185 (395)
T ss_pred HHHHHhcc
Confidence 3445543
No 68
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.77 E-value=2.9e-17 Score=148.98 Aligned_cols=165 Identities=21% Similarity=0.182 Sum_probs=136.3
Q ss_pred HHhhhhhhhccchhhhhhhhcCCcccccCchh-----HHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q psy15539 77 GGFIMGTILGWTSPAGDRLIAGEYPFLVTESD-----LSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGW 151 (333)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 151 (333)
..+..+...+...+.+|.+.++ +|.+..+ .+++.+++.++..+++++.|+++||+|||+.++.+.++.+++.
T Consensus 22 ~~~~~~~~~~~~~~~l~~~~~~---~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 98 (408)
T PRK09874 22 GCFLTGAAFSLVMPFLPLYVEQ---LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVM 98 (408)
T ss_pred HHHHHHHHHHHhhhhHHHHHHH---hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHH
Confidence 3344445555667778888887 8887654 4888999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHH
Q psy15539 152 GLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSII 227 (333)
Q Consensus 152 ~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~ 227 (333)
+++.+.++++.+++.|++.|++.+ ..+....++.+.+|+++|+++.++...+..+|..+++.+++.+ +|++.+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 177 (408)
T PRK09874 99 VLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFI 177 (408)
T ss_pred HHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 988888999999999999999765 5577778889999999999999999999999999998888765 79998888
Q ss_pred HHHHHHHHHH-HhhcccCC
Q psy15539 228 CALLPIFFVG-LMLLMPES 245 (333)
Q Consensus 228 ~~~~~~~~~~-~~~~~~e~ 245 (333)
.+++.++..+ ..++++|.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 178 TASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHhccC
Confidence 8777665443 33455554
No 69
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.77 E-value=1.8e-17 Score=150.14 Aligned_cols=134 Identities=13% Similarity=0.099 Sum_probs=112.9
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH---H-HhhHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLII---W-SQSVIMFCA 165 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~~~~ 165 (333)
..++.+.++ +|.++.+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++++++. . ..+++.+++
T Consensus 34 ~~~~~~~~~---~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 110 (402)
T TIGR00897 34 GWLSPFLKA---LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILL 110 (402)
T ss_pred HhHHHHHHH---hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHH
Confidence 345667677 899999999999999999999999999999999999999999999888876553 2 247888889
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHH-HHHHHHhHHH----HHHHHHH
Q psy15539 166 GRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGI-LFVYAVGSWA----SVYGLSI 226 (333)
Q Consensus 166 ~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~-~~~~~~~~~~----~~~~~~~ 226 (333)
.|++.|++.+...+...+++.+.+|+++|++++|+.+.+..+|. .+++.+++++ +|+..++
T Consensus 111 ~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~ 176 (402)
T TIGR00897 111 FYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLW 176 (402)
T ss_pred HHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHH
Confidence 99999999888877778888999999999999999999999986 5788877654 5544433
No 70
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.77 E-value=1.4e-17 Score=148.30 Aligned_cols=143 Identities=13% Similarity=0.078 Sum_probs=123.9
Q ss_pred ccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q psy15539 86 GWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCA 165 (333)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (333)
...++.+|.+.++ +|.+.++.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+.+ ..++.+.+++
T Consensus 17 ~~~~~~lp~l~~~---~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 92 (355)
T TIGR00896 17 TSVGPLLPQIRSA---LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFA 92 (355)
T ss_pred ccCcccHHHHHHH---hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHH
Confidence 4566778999998 99999999999999999999999999999999999999999998888887777 6788888999
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHH
Q psy15539 166 GRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA------SVYGLSIICALLPI 233 (333)
Q Consensus 166 ~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~ 233 (333)
.|++.|++.+...+....++.|++| ++|+++.++++.+..+|..+++.+...+ +|+..+.+.+++.+
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 9999999999888888888889886 6899999999999889988888776654 28887776655443
No 71
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.77 E-value=8.3e-18 Score=153.04 Aligned_cols=159 Identities=19% Similarity=0.108 Sum_probs=133.1
Q ss_pred hccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH-----Hhh
Q psy15539 85 LGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW-----SQS 159 (333)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~ 159 (333)
.......+|.+.++ ++.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+.... .++
T Consensus 33 ~~~~~~~~~~~~~~---~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 109 (417)
T PRK10489 33 LGLLGVAVPVQIQM---MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPS 109 (417)
T ss_pred HHHHHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCc
Confidence 34445567878777 8889999999999999999999999999999999999999888877776665442 457
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHH
Q psy15539 160 VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFF 235 (333)
Q Consensus 160 ~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 235 (333)
++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++.+++++ +|++.+++.++..++.
T Consensus 110 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~ 189 (417)
T PRK10489 110 LLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFIT 189 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 788889999999998888888889999999999999999999999999999999988765 7888888877776666
Q ss_pred HHHhhcccCCh
Q psy15539 236 VGLMLLMPESP 246 (333)
Q Consensus 236 ~~~~~~~~e~~ 246 (333)
++..+.+|+++
T Consensus 190 ~~~~~~l~~~~ 200 (417)
T PRK10489 190 LLPLLRLPALP 200 (417)
T ss_pred HHHHHhCCCCC
Confidence 66666677653
No 72
>PTZ00207 hypothetical protein; Provisional
Probab=99.77 E-value=6e-17 Score=150.09 Aligned_cols=173 Identities=12% Similarity=0.045 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q psy15539 66 TQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAV 145 (333)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 145 (333)
++|..+....+.....+. .+..+...|.+.++ +|++..+.+++.++. ....+++++.|+++||+|+|+++.++.+
T Consensus 25 ~Rw~~lva~~~~~~~~g~-~y~fsv~s~~L~~~---lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~l 99 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSF-MYAFNLISGAMQAR---YNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMT 99 (591)
T ss_pred chHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH---hCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 345444444444333333 22334556777777 999999999988763 4455678889999999999999999999
Q ss_pred HHHHHHHHHHHH------hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHH-HHHHhHH
Q psy15539 146 PTLVGWGLIIWS------QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILF-VYAVGSW 218 (333)
Q Consensus 146 ~~~~~~~~~~~~------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~-~~~~~~~ 218 (333)
++++++++++++ .+++.++++|++.|+|.+..++.....+.+++| ++||++.|+...+.++|+++ +++...+
T Consensus 100 l~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 100 VFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred HHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987 589999999999999999888888889999996 78999999999999999975 4444444
Q ss_pred H--HHHHHHHHHHHHHHHHH-HHhhcccC
Q psy15539 219 A--SVYGLSIICALLPIFFV-GLMLLMPE 244 (333)
Q Consensus 219 ~--~~~~~~~~~~~~~~~~~-~~~~~~~e 244 (333)
. +|+..+++.+++.++.. +..+++++
T Consensus 179 ~~~~~~~~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 179 FSDNTSAYFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhheeC
Confidence 4 77777777777776543 33334433
No 73
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.76 E-value=4e-17 Score=146.29 Aligned_cols=167 Identities=13% Similarity=0.170 Sum_probs=132.1
Q ss_pred Hhhhhhhhccchhhhhhhh-cCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH-HHHHHHHHHHHHH
Q psy15539 78 GFIMGTILGWTSPAGDRLI-AGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLL-LAVPTLVGWGLII 155 (333)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~~~~~~~~ 155 (333)
++..+...+...+.+|.+. ++ +|.++.+.+++.+.+.++..+.+++.|.++||+||||.+++ +.++.+++.+++.
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~---~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEE---VRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 4445555666667777765 55 99999999999999999999999999999999999887654 5566667778888
Q ss_pred HHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhH--HHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHH
Q psy15539 156 WSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTL--GTYFQLQCTAGILFVYAVGSWA----SVYGLSIICA 229 (333)
Q Consensus 156 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~--~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~ 229 (333)
++++++.+++.|++.|.+.+...+...++..|+.|++.|+.. .+....+..+|.++++.+++++ +|++.+++.+
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~ 162 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAA 162 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHH
Confidence 889999999999999888777888888888898887777654 5667777788888888887765 8999999988
Q ss_pred HHHHHHHHH-hhcccCChH
Q psy15539 230 LLPIFFVGL-MLLMPESPQ 247 (333)
Q Consensus 230 ~~~~~~~~~-~~~~~e~~~ 247 (333)
++.++..+. .+++||.|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred HHHHHHHHHHHHhCCCccc
Confidence 876665444 445787653
No 74
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.76 E-value=3.9e-17 Score=144.52 Aligned_cols=165 Identities=28% Similarity=0.371 Sum_probs=145.7
Q ss_pred HHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q psy15539 76 IGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLII 155 (333)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 155 (333)
+..+..........+..|.+.++ .|.+..+.+++.+...++..++.++.|+++||+|||+.+.++.++..++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 6 LGFFLSGLDRGLLSPALPLLAED---LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHhhhhhHhhHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 34445555666677778888888 899999999999999999999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHH
Q psy15539 156 WSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALL 231 (333)
Q Consensus 156 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~ 231 (333)
+.++.+.++++|++.|++.+...+...+++.|++|+++|++..++.+....+|..+++.+++.+ +|++.+++.+++
T Consensus 83 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (352)
T cd06174 83 FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAIL 162 (352)
T ss_pred HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998877 689998888877
Q ss_pred HHHHHHHhhccc
Q psy15539 232 PIFFVGLMLLMP 243 (333)
Q Consensus 232 ~~~~~~~~~~~~ 243 (333)
.++..+..++++
T Consensus 163 ~~~~~~~~~~~~ 174 (352)
T cd06174 163 GLLLALLLLFLL 174 (352)
T ss_pred HHHHHHHHHHHH
Confidence 776555444443
No 75
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.75 E-value=4.8e-17 Score=146.38 Aligned_cols=143 Identities=23% Similarity=0.261 Sum_probs=114.7
Q ss_pred cCchhHHHHHHH-----HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHH--------HHHHHHHHH
Q psy15539 104 VTESDLSFIGSS-----MALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVI--------MFCAGRLLT 170 (333)
Q Consensus 104 ~~~~~~~~~~~~-----~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~ 170 (333)
.++.+.+.+.+. ..++..+++++.|+++||+|||+++.++.++.+++.+++.+++++. .++++|++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 444555554432 3344457899999999999999999999999999999999887764 478889999
Q ss_pred hhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH------------HHHHHHHHHHHHHHHHHHH
Q psy15539 171 GFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA------------SVYGLSIICALLPIFFVGL 238 (333)
Q Consensus 171 G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~ 238 (333)
|++.+...+....++.|++|+++|++..++.+.+..+|.++++.++..+ +|++.+++.+++.++..+.
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888775432 6898888877666555544
Q ss_pred hhcccCCh
Q psy15539 239 MLLMPESP 246 (333)
Q Consensus 239 ~~~~~e~~ 246 (333)
....||++
T Consensus 187 ~~~~~~~~ 194 (394)
T TIGR00883 187 RRNLEETP 194 (394)
T ss_pred HHhcCCCh
Confidence 44566654
No 76
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.75 E-value=5.7e-17 Score=140.40 Aligned_cols=203 Identities=17% Similarity=0.123 Sum_probs=152.4
Q ss_pred chhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh---HHHHH
Q psy15539 88 TSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQS---VIMFC 164 (333)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~---~~~~~ 164 (333)
.++..+.+.++ +++|+.|.+++.++..+...+..++.|++.||+|.|++..++.++..+.++..+++.+ .+.++
T Consensus 33 ~s~l~~~i~~~---~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll 109 (417)
T COG2223 33 FSPLGVFIKSD---FGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLL 109 (417)
T ss_pred HHHHHhhhccc---cCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHH
Confidence 34445556566 9999999999999999999999999999999999999999999999999999998764 45999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHH---HHHHHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHH
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQ---LQCTAGILFVYAVGSWAS---VYGLSIICALLPIFFVGL 238 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~---~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 238 (333)
+++++.|++.+ .+.+...+++.++|++++|.++|++. .+..+.+.++|.+....+ |+....+..+..++..+.
T Consensus 110 ~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~ 188 (417)
T COG2223 110 VIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAGAGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVL 188 (417)
T ss_pred HHHHHHhcccc-eehcccccccccCChhhhhHHHHHhccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999855 77888999999999999999999976 344445555666655556 888887777777664444
Q ss_pred -hhcccCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHhhccCc-cchHhhhcChhhHHHHHHHHHHHHHH
Q psy15539 239 -MLLMPESPQFHLKKNRVKQAKESLQWFRGSEYDIDSEITDMQNSLEKERSDK-VPLMQAFSTPAAKRGLLIGLGVMFIQ 316 (333)
Q Consensus 239 -~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (333)
++...+.|.... ..++.. ..++.++++++.| .+.+..+.
T Consensus 189 ~~~~~~d~p~~r~----------------------------------~~~~~~~~~~~~v~~~~~~W-----~lsllY~~ 229 (417)
T COG2223 189 AWLGMNDVPEHRA----------------------------------SVKPQLPAQLKAVFSNKDTW-----LLSLLYFA 229 (417)
T ss_pred HHHHhCCChhhhc----------------------------------cccccchhHHHHHhcCcchH-----HHHHHHHH
Confidence 445555543100 000011 3456777777533 34455555
Q ss_pred hhcchhhhhhchhcccC
Q psy15539 317 QFGGINAVVFYTVKIFK 333 (333)
Q Consensus 317 ~~~~~~~~~~y~~~~~~ 333 (333)
.+.++..++.|+|.|++
T Consensus 230 tFG~Fvgfs~~l~~~~~ 246 (417)
T COG2223 230 TFGGFVGFSAYLPMYLV 246 (417)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 67788889999988763
No 77
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.73 E-value=1.2e-16 Score=147.23 Aligned_cols=146 Identities=17% Similarity=0.175 Sum_probs=121.0
Q ss_pred chhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q psy15539 88 TSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGR 167 (333)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (333)
....++.+..+ +|-+ ....|+.+...++..++.++.|.++|.||||.+++.+.++..+++++++.++|...++++.
T Consensus 63 ~a~~l~~I~~d---iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~ 138 (599)
T PF06609_consen 63 PASILPYINAD---IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGM 138 (599)
T ss_pred cHHHHHHHHHh---cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHH
Confidence 34456767776 7765 5688999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH
Q psy15539 168 LLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGL 238 (333)
Q Consensus 168 ~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 238 (333)
.+.|+|.|.... ....++|..|.|.|+.+.++......+....++.++..+ +|||.|++.++...+.++.
T Consensus 139 ~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 139 VLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred HHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHH
Confidence 999999877664 455689999999998888776665555555566666544 8999999998877665443
No 78
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.71 E-value=7.4e-16 Score=132.75 Aligned_cols=167 Identities=22% Similarity=0.109 Sum_probs=143.6
Q ss_pred HHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q psy15539 71 ALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVG 150 (333)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 150 (333)
...+....++.|+......+.+|++.+. ++++..+++++...++.|+.+++++.|++.+|+|+|+.++.|..+++++
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~~~---f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg 91 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLKEV---FDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVG 91 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHH---hCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 4445555566677777888889999998 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH--------
Q psy15539 151 WGLII---WSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-------- 219 (333)
Q Consensus 151 ~~~~~---~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-------- 219 (333)
++++. ...++..++++-++.|.|.+...+..+.++....+++.-...+++.+..+++|.+++|+++.++
T Consensus 92 ~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~ 171 (422)
T COG0738 92 AALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALT 171 (422)
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhc
Confidence 99885 4468889999999999999999999999999999998888999999999999999999998754
Q ss_pred ---------------HHHHHHHHHHHHHHHHHHHhh
Q psy15539 220 ---------------SVYGLSIICALLPIFFVGLML 240 (333)
Q Consensus 220 ---------------~~~~~~~~~~~~~~~~~~~~~ 240 (333)
.|+.+|...+...++..+...
T Consensus 172 ~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~ 207 (422)
T COG0738 172 MSAAQILAIKGADASSVQFPYLILAGLLVLLAVLIL 207 (422)
T ss_pred cCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 355666666665555444443
No 79
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.71 E-value=9.9e-16 Score=141.90 Aligned_cols=170 Identities=20% Similarity=0.198 Sum_probs=135.4
Q ss_pred HHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhcc-----chhHH-HHHHHH
Q psy15539 72 LTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTV-----GRKNT-MLLLAV 145 (333)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~ 145 (333)
....+..+..+.........+|.+.++ .|.+..+.+.+ +.....+ ++.+++|+++||+ |||+. +.++.+
T Consensus 15 ~~~~~l~~~~gl~~~~~~~~l~~~l~~---~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i 89 (491)
T PRK11010 15 AILLILGFASGLPLALTSGTLQAWMTV---ENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHH
Confidence 334444445566666777788999888 89998888886 3333443 6899999999999 99986 556777
Q ss_pred HHHHHHHHHHHH---hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH---
Q psy15539 146 PTLVGWGLIIWS---QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA--- 219 (333)
Q Consensus 146 ~~~~~~~~~~~~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~--- 219 (333)
+.+++.+++++. .+++.+.+.+++.|++.+...+...++..|++|+++|+++.++...+..+|.++++.++.++
T Consensus 90 ~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~ 169 (491)
T PRK11010 90 LLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR 169 (491)
T ss_pred HHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 777777777664 46778888999999999999999999999999999999999999999999999988776654
Q ss_pred --HHHHHHHHHHHHHHHHHHHhhcccCCh
Q psy15539 220 --SVYGLSIICALLPIFFVGLMLLMPESP 246 (333)
Q Consensus 220 --~~~~~~~~~~~~~~~~~~~~~~~~e~~ 246 (333)
+||..|++.+++.++..+..++.||++
T Consensus 170 ~~GWr~~f~i~a~l~ll~~l~~~~~~e~~ 198 (491)
T PRK11010 170 YLGWQGMYWLMAALLIPCIIATLLAPEPT 198 (491)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 799999998887776666555677764
No 80
>KOG2615|consensus
Probab=99.71 E-value=2.4e-16 Score=134.21 Aligned_cols=117 Identities=21% Similarity=0.253 Sum_probs=107.9
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVV 181 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~ 181 (333)
.+.+..-.|.+.+.++++.++.++.+|.++||+|||+++.++++..+++..+.+.+.|+..+.+.|++.|+..| ...+.
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~ 141 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVI 141 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHH
Confidence 34455678999999999999999999999999999999999999999999999999999777777999999987 56678
Q ss_pred hhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 182 PMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 182 ~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
-++++|++++++|+.+++..++.+++|.++||.+++++
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyl 179 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYL 179 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHH
Confidence 89999999999999999999999999999999999987
No 81
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.70 E-value=2.5e-16 Score=145.33 Aligned_cols=165 Identities=12% Similarity=-0.021 Sum_probs=129.4
Q ss_pred HHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHHHHHH
Q psy15539 76 IGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDT-VGRKNTMLLLAVPTLVGWGLI 154 (333)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~ 154 (333)
+..+...+..+.....++.|..+ ++|.+.++.+++.+.+.....+..+++|+++|| +||||+++++.++++++++++
T Consensus 21 ~~~~~er~~~y~~~~~l~~yl~~--~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~ 98 (489)
T PRK10207 21 FVELWERFGYYGVQGILAVFFVK--QLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMT 98 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHH
Confidence 33333444444444445545443 389999999999999998888889999999999 999999999999999999999
Q ss_pred HHHhhHH-HHHHHHHHHhhhhhhhhhhhhhhhcccCCCcc--hhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHH
Q psy15539 155 IWSQSVI-MFCAGRLLTGFGGGSFAVVVPMYTAEIAETEI--RGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSII 227 (333)
Q Consensus 155 ~~~~~~~-~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~--rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~ 227 (333)
+++.+.. .++++|++.|+|.|...+...++++|.+|+++ |+.+.+++..+..+|..++|.+++++ +|++.|++
T Consensus 99 ~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i 178 (489)
T PRK10207 99 GMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNL 178 (489)
T ss_pred HHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHH
Confidence 9876544 35578999999999999999999999998874 57788888888899988888887776 89999988
Q ss_pred HHHHHHHHHHHhhcc
Q psy15539 228 CALLPIFFVGLMLLM 242 (333)
Q Consensus 228 ~~~~~~~~~~~~~~~ 242 (333)
.++..++.++.+++.
T Consensus 179 ~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 179 CGAGLIIALLVYFAC 193 (489)
T ss_pred HHHHHHHHHHHHHHc
Confidence 665444444444433
No 82
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.70 E-value=7.9e-16 Score=139.35 Aligned_cols=166 Identities=18% Similarity=0.154 Sum_probs=136.2
Q ss_pred HHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhcc-----chhH-HHHHHHHHHHH
Q psy15539 76 IGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTV-----GRKN-TMLLLAVPTLV 149 (333)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~ 149 (333)
..++..+...+.....+|.+.++ .|++.+++|++..+... .+..+++|+++||+ |||| .+.++.++.++
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~---~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTV---EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHH---cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 34455667777778889999999 99999999999777665 69999999999999 8876 67778888887
Q ss_pred HHHHHHHH---hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HH
Q psy15539 150 GWGLIIWS---QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SV 221 (333)
Q Consensus 150 ~~~~~~~~---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~ 221 (333)
+..++.+. .+++.+++..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.++ +|
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw 160 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGW 160 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCH
Confidence 87777776 35677777777888888888899999999999999999999999999999999988876554 79
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCh
Q psy15539 222 YGLSIICALLPIFFVGLMLLMPESP 246 (333)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~e~~ 246 (333)
+..|++.+++.++..+..++.||++
T Consensus 161 ~~~f~i~a~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 161 GNTYLLMAGLMLAGALTTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999998887766555555667654
No 83
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.70 E-value=3.8e-16 Score=143.95 Aligned_cols=165 Identities=12% Similarity=-0.039 Sum_probs=137.5
Q ss_pred HHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHHHHHHH
Q psy15539 77 GGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDT-VGRKNTMLLLAVPTLVGWGLII 155 (333)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~ 155 (333)
..+......+...+.+|.|..+...+|.+..+.+++.+.+.++..++.+++|+++|| +|||+++.++.++.+++.++++
T Consensus 18 ~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~ 97 (475)
T TIGR00924 18 VELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLA 97 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 333444444455566777776522378999999999999999999999999999999 8999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcc---hhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHH
Q psy15539 156 WSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEI---RGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIIC 228 (333)
Q Consensus 156 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~---rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~ 228 (333)
++++...+++++++.|++.|...+...+++++++|+++ |+.+.++++.+..+|.+++|.+++++ +|++.|++.
T Consensus 98 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~ 177 (475)
T TIGR00924 98 MSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLA 177 (475)
T ss_pred hcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHH
Confidence 88888888899999999999999999999999998764 88899999999999999999998876 799999887
Q ss_pred HHHHHHHHHHhhc
Q psy15539 229 ALLPIFFVGLMLL 241 (333)
Q Consensus 229 ~~~~~~~~~~~~~ 241 (333)
++..++.++.+++
T Consensus 178 ~~~~~~~~l~~~~ 190 (475)
T TIGR00924 178 AVGMVIGLLTFFA 190 (475)
T ss_pred HHHHHHHHHHHHH
Confidence 7655554444433
No 84
>KOG2504|consensus
Probab=99.67 E-value=2.1e-16 Score=145.16 Aligned_cols=171 Identities=12% Similarity=0.122 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q psy15539 66 TQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAV 145 (333)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 145 (333)
+-|.+++...+..+........++...+.+.++ ++.+.++.+|+.++......+.+++.+.+.||+|.|.+.+.|.+
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~---f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDY---FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHH---hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 446666666666655544455556667888888 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHH-HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----H
Q psy15539 146 PTLVGWGLIIWSQSVIMFCAG-RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----S 220 (333)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~-~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~ 220 (333)
+..++.++..++++++.+++. -++.|+|.|..+......+..+| +++|+.+.|+...+.++|..+-|.+..++ |
T Consensus 120 v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G 198 (509)
T KOG2504|consen 120 VAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG 198 (509)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC
Confidence 999999999999999887776 78999999999999888888777 57899999999999999999999988777 9
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy15539 221 VYGLSIICALLPIFFVGLML 240 (333)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~ 240 (333)
||+.+++.+.+.+-.++...
T Consensus 199 ~r~~~l~~~~~~l~~~~~~~ 218 (509)
T KOG2504|consen 199 WRGALLIFGGISLNVLVAGA 218 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 99999888887765444444
No 85
>KOG3764|consensus
Probab=99.67 E-value=1.8e-16 Score=135.74 Aligned_cols=142 Identities=20% Similarity=0.204 Sum_probs=131.6
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhh
Q psy15539 101 PFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVV 180 (333)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~ 180 (333)
..+-++++.|++.+...+...+.+++.|.+.||+|+|-.+++|++++..+++++++..+++.++++|.++|+|.+...+.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 36677789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCcc-hhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhhcc
Q psy15539 181 VPMYTAEIAETEI-RGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLMLLM 242 (333)
Q Consensus 181 ~~~~~~e~~~~~~-rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
..+++++.+|.+. |++++|+.-.+.++|.+++|++++.+ |.+.+|++.++++++-....+++
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 9999999998765 79999999999999999999999987 88999999999998865555543
No 86
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.66 E-value=2.6e-15 Score=135.03 Aligned_cols=153 Identities=10% Similarity=-0.049 Sum_probs=118.0
Q ss_pred HHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHH-HHHHHH-HH
Q psy15539 76 IGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAV-PTLVGW-GL 153 (333)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~-~~~~~~-~~ 153 (333)
+..+......+...+.+|.+.++ +|.+..+.+++.+++.++..++++++|+++||+||+........ ...+.. ..
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~---~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~ 87 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKG---IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAF 87 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 33444444556777889999998 99999999999999999999999999999999998544322221 111222 23
Q ss_pred HHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHH
Q psy15539 154 IIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICA 229 (333)
Q Consensus 154 ~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~ 229 (333)
+..+++++.+++.|.+.|.+.+...+...++..++ +++|++..+....+.++|.+++|++++++ +|+..+++.+
T Consensus 88 ~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~ 165 (382)
T TIGR00902 88 SAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILT 165 (382)
T ss_pred HHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHH
Confidence 34577899999999999998888888888887654 57789999999999999999999988776 8998887766
Q ss_pred HHHH
Q psy15539 230 LLPI 233 (333)
Q Consensus 230 ~~~~ 233 (333)
+..+
T Consensus 166 ~~~~ 169 (382)
T TIGR00902 166 AGLA 169 (382)
T ss_pred HHHH
Confidence 5533
No 87
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.66 E-value=2.9e-15 Score=134.79 Aligned_cols=155 Identities=12% Similarity=-0.005 Sum_probs=116.7
Q ss_pred hhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchh----HHHHHHHHHHHHHHHHHHHHh
Q psy15539 83 TILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRK----NTMLLLAVPTLVGWGLIIWSQ 158 (333)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~~~ 158 (333)
...+.+.+.+|.+.++ +|.|..+.|++.+++.++..+++++.|+++||+||| +.+.++.++. ........+
T Consensus 18 ~~~g~~~p~l~~~l~~---~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~ 92 (382)
T PRK11128 18 FAYGVFLPFWSVWLKG---QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAH 92 (382)
T ss_pred HHHHHHhhhHHHHHHh---cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcc
Confidence 4456677888899988 999999999999999999999999999999999984 3332222221 222233457
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q psy15539 159 SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIF 234 (333)
Q Consensus 159 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~ 234 (333)
+++.+++.|++.|++.+...+...++..++ .++|+++.+.......+|..++|++++++ +|+..+++.++..++
T Consensus 93 ~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~ 170 (382)
T PRK11128 93 SFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVAS 170 (382)
T ss_pred cHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHH
Confidence 899999999999999888888877777766 35677878877877788888888888876 899988877765444
Q ss_pred HHHHhhcccC
Q psy15539 235 FVGLMLLMPE 244 (333)
Q Consensus 235 ~~~~~~~~~e 244 (333)
.++..++.||
T Consensus 171 ~~~~~~~~~~ 180 (382)
T PRK11128 171 MLLGQLLRPT 180 (382)
T ss_pred HHHHHHccCC
Confidence 4443444444
No 88
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.66 E-value=4.5e-15 Score=134.19 Aligned_cols=155 Identities=14% Similarity=0.126 Sum_probs=111.2
Q ss_pred hhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH---HH--
Q psy15539 83 TILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLII---WS-- 157 (333)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~-- 157 (333)
.......+.+|.+..+ ++|.+..+.+++.+++.++..+++++.|+++||+|||+.++.+.+..+++..... +.
T Consensus 16 ~~~~~~~~~~~~~~~~--~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (396)
T TIGR00882 16 FIMSAYFPFFPIWLHD--VNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPL 93 (396)
T ss_pred HHHHHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3344555667777654 3899999999999999999999999999999999999999887666655443321 11
Q ss_pred ---hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHH
Q psy15539 158 ---QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA---SVYGLSIICALL 231 (333)
Q Consensus 158 ---~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~ 231 (333)
.....+++.+++.|++.+...+....+..+..+ .++...+.......+|..+++.+++.+ +|+..|++.+++
T Consensus 94 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~ 171 (396)
T TIGR00882 94 LQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGF 171 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHH
Confidence 123345566888888888777777777666433 234455666666677777788777765 899999888887
Q ss_pred HHHHHHHhhc
Q psy15539 232 PIFFVGLMLL 241 (333)
Q Consensus 232 ~~~~~~~~~~ 241 (333)
.++..+..++
T Consensus 172 ~~~~~~~~~~ 181 (396)
T TIGR00882 172 ALILMLLLMF 181 (396)
T ss_pred HHHHHHHHHH
Confidence 7765544443
No 89
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.66 E-value=6.6e-15 Score=150.27 Aligned_cols=113 Identities=14% Similarity=0.055 Sum_probs=101.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH---HHhhHHHHHHHHHHHhhhhhhhhhhhhh
Q psy15539 107 SDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLII---WSQSVIMFCAGRLLTGFGGGSFAVVVPM 183 (333)
Q Consensus 107 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~G~~~g~~~~~~~~ 183 (333)
...+++.+++.++++++++++|+++||+|||++++++.++.+++.++.. ...+++.++++|++.|++.+...+...+
T Consensus 47 ~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 126 (1146)
T PRK08633 47 ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYG 126 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHh
Confidence 4578999999999999999999999999999999988877665555443 3568899999999999999999999999
Q ss_pred hhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 184 YTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 184 ~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
++.|++|+++|++++++.+.+..+|.++++.+++++
T Consensus 127 ~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l 162 (1146)
T PRK08633 127 IIPELVGKENLSRANGLLEAFTIVAILAGTALFSFL 162 (1146)
T ss_pred hhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998776
No 90
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.65 E-value=6.4e-15 Score=131.23 Aligned_cols=156 Identities=20% Similarity=0.158 Sum_probs=124.1
Q ss_pred hccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhcc-----chhHHH-HHHHHHHHHHHHHHHHH-
Q psy15539 85 LGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTV-----GRKNTM-LLLAVPTLVGWGLIIWS- 157 (333)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-----Grr~~l-~~~~~~~~~~~~~~~~~- 157 (333)
.+..++.+|.+.++ +|+|.++.+++... .+...+ .+++|+++||+ ||||.+ +.+.++.++...++++.
T Consensus 4 ~~~~~~~~~~~~~~---~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~ 78 (356)
T TIGR00901 4 LGLVGNTLPYWLRS---KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV 78 (356)
T ss_pred chhHHhHHHHHHHH---cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC
Confidence 34455668889888 99999999998755 444444 99999999998 899874 56777777776666665
Q ss_pred --hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----H--------HHH
Q psy15539 158 --QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----S--------VYG 223 (333)
Q Consensus 158 --~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~--------~~~ 223 (333)
.+.+.+....++.+++.+...+...+++.|++|+++|+.+.++...+..+|.++++.++.++ + ||.
T Consensus 79 ~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~ 158 (356)
T TIGR00901 79 PSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGY 158 (356)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHH
Confidence 45566777777888888888899999999999999999999999999999999999888655 6 999
Q ss_pred HHHHHHHHHHHHHHHhh-cccCC
Q psy15539 224 LSIICALLPIFFVGLML-LMPES 245 (333)
Q Consensus 224 ~~~~~~~~~~~~~~~~~-~~~e~ 245 (333)
.|++.++..++.++..+ ..||+
T Consensus 159 ~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 159 IFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhccCC
Confidence 99988887766555444 34654
No 91
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.65 E-value=8.6e-15 Score=149.21 Aligned_cols=140 Identities=14% Similarity=0.086 Sum_probs=113.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH---HHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhh
Q psy15539 107 SDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLL---LAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPM 183 (333)
Q Consensus 107 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~ 183 (333)
...++..+++.+.++++++++|+++||+|||+++.. +.++.++..+......+++.++++|+++|++.+...+...+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 346888889999999999999999999999997643 22222232333334579999999999999999999999999
Q ss_pred hhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhhcccCCh
Q psy15539 184 YTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLMLLMPESP 246 (333)
Q Consensus 184 ~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~e~~ 246 (333)
++.+++|+++|++++++.+++..+|.+++|++++++ +|++.|+..++..++.+++.+++|+++
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 999999999999999999999999999999999987 788888555555555555566666653
No 92
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.63 E-value=7.8e-15 Score=140.10 Aligned_cols=138 Identities=16% Similarity=0.086 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhccc
Q psy15539 109 LSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEI 188 (333)
Q Consensus 109 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~ 188 (333)
..+...+..++.+++.++.|+++||+|||++++++.++.++++++.++.++...+++++++.|++.++..+...++++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556677899999999999999999999999999999999999988888888888888899998888899999999999
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHhhcccCCh
Q psy15539 189 AETEIRGTLGTYFQLQCTAGILFVYAVGSWA---SVYGLSIICALLPIFFVGLMLLMPESP 246 (333)
Q Consensus 189 ~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e~~ 246 (333)
+|++.|++++|+.+....+|.+++|.+++.+ +...++++.+++.++..++.+++||+.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999998765 345667777777777666666779874
No 93
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.62 E-value=4.9e-14 Score=127.25 Aligned_cols=162 Identities=12% Similarity=0.163 Sum_probs=115.6
Q ss_pred hhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHH-HHHHHHHHHHHhhhccchhHHHH-HHHHHHHHHHHHHHHHhh
Q psy15539 82 GTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMAL-GAVFGSPVVGNLVDTVGRKNTML-LLAVPTLVGWGLIIWSQS 159 (333)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~~~ 159 (333)
+.......+.+|.+..+ ++|.+.++.|++.+...+ +..++.++.++ +||+||||.++ .+.++.+++.++..++++
T Consensus 28 ~~~~~~~~p~~~~~l~~--~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 104 (393)
T PRK15011 28 GIAGALQTPTLSIFLTD--EVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRN 104 (393)
T ss_pred HHHHHHHHHHHHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhH
Confidence 33334455666665543 389999999999776655 55566655666 99999998754 556666677777788888
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcch--hhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHH
Q psy15539 160 VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIR--GTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPI 233 (333)
Q Consensus 160 ~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~r--g~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~ 233 (333)
++.+++.+.+.|...+...+....+..++.+++.| +...+..+.+..+|.+++|++++++ +||..|++.++..+
T Consensus 105 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~ 184 (393)
T PRK15011 105 YFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFI 184 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHH
Confidence 88877666555555556677778888887776655 3445778888889999999988766 89999988887766
Q ss_pred HHHH-HhhcccCCh
Q psy15539 234 FFVG-LMLLMPESP 246 (333)
Q Consensus 234 ~~~~-~~~~~~e~~ 246 (333)
+..+ ..+++||.+
T Consensus 185 ~~~~~~~~~~~~~~ 198 (393)
T PRK15011 185 VCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHhhcCccC
Confidence 5443 344677764
No 94
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.60 E-value=4.7e-14 Score=128.31 Aligned_cols=160 Identities=18% Similarity=0.240 Sum_probs=120.2
Q ss_pred hhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhh----ccchhHHHHHH-HHHHHHHHHHHHHHh
Q psy15539 84 ILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVD----TVGRKNTMLLL-AVPTLVGWGLIIWSQ 158 (333)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----r~Grr~~l~~~-~~~~~~~~~~~~~~~ 158 (333)
......+.++.|.++ +|.+....+++..+..+..++.+++.|+++| |+|||+.++++ .+..+++.+++++++
T Consensus 19 ~~~l~~~~l~~yl~~---lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~ 95 (477)
T TIGR01301 19 GWALQLSLLTPYVQE---LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAA 95 (477)
T ss_pred HHHHHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCc
Confidence 334444556667777 9999999999999999999999999999999 59999998874 666666666776655
Q ss_pred hH-----------------HHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcch--hhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 159 SV-----------------IMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIR--GTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 159 ~~-----------------~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~r--g~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+. ..++++..+..++.....+...++++|.+|+++| +.+.++.+....+|.++++.+++..
T Consensus 96 ~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 96 DIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred hhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 2233334455567777888889999999998876 5788888888899999998887653
Q ss_pred -------------------HHHHHHHHHHHHHHHH-HHHhhcccCCh
Q psy15539 220 -------------------SVYGLSIICALLPIFF-VGLMLLMPESP 246 (333)
Q Consensus 220 -------------------~~~~~~~~~~~~~~~~-~~~~~~~~e~~ 246 (333)
+.+..|++.+++.++. ++..++.+|.|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 176 GLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred hHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 3456777776666654 44455778865
No 95
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.60 E-value=8.8e-15 Score=111.79 Aligned_cols=132 Identities=25% Similarity=0.301 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCc
Q psy15539 113 GSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETE 192 (333)
Q Consensus 113 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~ 192 (333)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.++..+.++.+.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34567788999999999999999999999999999999888888889999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhh-cccC
Q psy15539 193 IRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLML-LMPE 244 (333)
Q Consensus 193 ~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~e 244 (333)
+|++..++.+....+|..+++.+.+++ +|++.+++.+++.++..+..+ +.||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999998877 788888887777666544433 4444
No 96
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.60 E-value=2.4e-14 Score=130.76 Aligned_cols=155 Identities=14% Similarity=-0.006 Sum_probs=120.1
Q ss_pred hhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhcc-chhHHHHHHHHHHHHHHHHHHHHh-hH
Q psy15539 83 TILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTV-GRKNTMLLLAVPTLVGWGLIIWSQ-SV 160 (333)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~ 160 (333)
+..+.....+|.+..+ ++|+++.+.+.+.+.+.....++.+++|+++||+ |||+.++++.++.+++.+++.... +.
T Consensus 23 fs~Yg~~~~L~~yL~~--~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~ 100 (493)
T PRK15462 23 FSFYGMRALLILYLTN--QLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHP 100 (493)
T ss_pred HHHHHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 3333444556667654 3899999999999999999999999999999999 999999999999999987776543 22
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccCCCc--chhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q psy15539 161 IMFCAGRLLTGFGGGSFAVVVPMYTAEIAETE--IRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIF 234 (333)
Q Consensus 161 ~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~--~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~ 234 (333)
..+.++..+.++|.|...+...++++|.+|++ +|..+.++...+..+|..++|.+.+++ +|++.|.+.++..++
T Consensus 101 ~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l 180 (493)
T PRK15462 101 SFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIA 180 (493)
T ss_pred hHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHH
Confidence 33444444455666666677788999999876 799999998888889999999999887 799999887665544
Q ss_pred HHHHh
Q psy15539 235 FVGLM 239 (333)
Q Consensus 235 ~~~~~ 239 (333)
.++.+
T Consensus 181 ~li~~ 185 (493)
T PRK15462 181 GLVIF 185 (493)
T ss_pred HHHHH
Confidence 44433
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.60 E-value=2.3e-14 Score=132.92 Aligned_cols=151 Identities=16% Similarity=0.118 Sum_probs=119.7
Q ss_pred hhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHHHHHHHHHh-hH
Q psy15539 83 TILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDT-VGRKNTMLLLAVPTLVGWGLIIWSQ-SV 160 (333)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~-~~ 160 (333)
...+.....++.+..+ ++|.+..+.+++.+.+........+++|+++|| +|||+.++++.++.+++.++++++. +.
T Consensus 35 ~~~y~~~~~l~~yl~~--~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~ 112 (500)
T PRK09584 35 FGYYGLQGIMAVYLVK--QLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDA 112 (500)
T ss_pred HHHHHHHHHHHHHHHH--HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccH
Confidence 3333344445556533 389999888888888776666667889999999 5999999999999999988888864 45
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcc--hhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q psy15539 161 IMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEI--RGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIF 234 (333)
Q Consensus 161 ~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~--rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~ 234 (333)
..+++++++.|++.|...+...+++.|++|++. |..+.++++.+..+|..++|.+++++ +|++.|++.++..++
T Consensus 113 ~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 113 GIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 667788999999999888888899999998654 44577888899999999999998877 899999887765444
Q ss_pred H
Q psy15539 235 F 235 (333)
Q Consensus 235 ~ 235 (333)
.
T Consensus 193 ~ 193 (500)
T PRK09584 193 T 193 (500)
T ss_pred H
Confidence 3
No 98
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.58 E-value=3.9e-14 Score=129.10 Aligned_cols=155 Identities=14% Similarity=0.033 Sum_probs=100.0
Q ss_pred ccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH---HHhhHH-
Q psy15539 86 GWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLII---WSQSVI- 161 (333)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~- 161 (333)
+...+.+|.+..+ ++|++..+.|++.+++.++..+++++.|+++||+|||++++++..+.+++..... ..+...
T Consensus 27 ~~~~~~~~~~l~~--~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (420)
T PRK09528 27 SSWFSFFPIWLHD--INGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQY 104 (420)
T ss_pred HHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566666554 3899999999999999999999999999999999999999887666554433221 111111
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcccCC--CcchhhHHHHHHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHH
Q psy15539 162 MFCAGRLLTGFGGGSFAVVVPMYTAEIAE--TEIRGTLGTYFQLQCTAGILFVYAVGSWA---SVYGLSIICALLPIFFV 236 (333)
Q Consensus 162 ~~~~~~~l~G~~~g~~~~~~~~~~~e~~~--~~~rg~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 236 (333)
......++.++..+.........+.++.+ .++++...+.......+|..+++.+++++ +|+..|++.++++++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~ 184 (420)
T PRK09528 105 NILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILL 184 (420)
T ss_pred HHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHH
Confidence 01111222233222222222222223322 24566677777788888888888888776 78888888877776655
Q ss_pred HHhhcc
Q psy15539 237 GLMLLM 242 (333)
Q Consensus 237 ~~~~~~ 242 (333)
+..+++
T Consensus 185 ~~~~~~ 190 (420)
T PRK09528 185 VLLFFA 190 (420)
T ss_pred HHHhcc
Confidence 555544
No 99
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.56 E-value=1.7e-13 Score=123.69 Aligned_cols=152 Identities=12% Similarity=0.105 Sum_probs=120.3
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLL 169 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (333)
...|.+.++ ++|.+..+.+++.+...++.+++.++.|+++||+|||+.+..+.+...+........++.+.+++.+++
T Consensus 237 ~~~p~~l~~--~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 237 INMPLFIIN--ELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHH--HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 346656543 278888899988888788888899999999999999998887766666555555556677777788888
Q ss_pred HhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhhcccC
Q psy15539 170 TGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLMLLMPE 244 (333)
Q Consensus 170 ~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~e 244 (333)
.+++.|...+....+..|.+|+ +||++.++++....+|..+++.+++.+ +|+..+++.+++.++.++..++.||
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 8888777777777888899885 599999998888888999998888776 7888888888777777766666654
No 100
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.55 E-value=1.6e-13 Score=124.51 Aligned_cols=149 Identities=16% Similarity=0.110 Sum_probs=122.1
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLT 170 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 170 (333)
..|.+.++ .|.+..+.+.+.+...++..++.++.|++.||+|||+.+..+.+...++.++..+.++.+.+.+..++.
T Consensus 242 ~~p~~~~~---~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (406)
T PRK11551 242 WLPSLLVG---QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAA 318 (406)
T ss_pred HHHHHHHh---CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 46777777 899999999999999999999999999999999999998887777777766666677777777788888
Q ss_pred hhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHhhcc
Q psy15539 171 GFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVYGLSIICALLPIFFVGLMLLM 242 (333)
Q Consensus 171 G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
|++.++..+...+++.|.+|++.|+++.++.+....+|..++|.+.+++ +|...++..+...++.++..++.
T Consensus 319 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 319 GLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888888899999999999999999999999999999999998877 44555555555554444444433
No 101
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.54 E-value=1.1e-13 Score=123.65 Aligned_cols=141 Identities=17% Similarity=0.139 Sum_probs=117.9
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHH
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQS--VIMFCAGRLL 169 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l 169 (333)
.+.+.++ ++.++.+.+++.+...++..++.++.|++.||+|||+.+.++.++.+++.++..+.++ ...+++..++
T Consensus 228 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 228 YKPYGQS---LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 4455566 7888888999999999999999999999999999999999998888888877766553 2334456778
Q ss_pred HhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHH
Q psy15539 170 TGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFF 235 (333)
Q Consensus 170 ~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 235 (333)
.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+++ +|++.+++.+++.++.
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 88888888888888999999999999999999999999999999988766 7888888777666554
No 102
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.53 E-value=1e-13 Score=126.91 Aligned_cols=151 Identities=15% Similarity=0.128 Sum_probs=113.7
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhc----cchhH-HHHHHHHHHHHHHHHHHHHhh------H
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDT----VGRKN-TMLLLAVPTLVGWGLIIWSQS------V 160 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~ 160 (333)
.+.+.++ +|+++.+.|++.++..+..++..++.|+++|| +|||| .++++.+..+++.+++.+.++ .
T Consensus 23 ~~~~~~~---~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~ 99 (437)
T TIGR00792 23 LFFYTDV---LGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKL 99 (437)
T ss_pred HHHHHHc---cCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHH
Confidence 3444455 89999999999999999999999999999997 67755 566788888888877776543 4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccC-CCcchhhHHHHHHHHHHHHHHHHHHHhHH-----------HHHHHHHHHH
Q psy15539 161 IMFCAGRLLTGFGGGSFAVVVPMYTAEIA-ETEIRGTLGTYFQLQCTAGILFVYAVGSW-----------ASVYGLSIIC 228 (333)
Q Consensus 161 ~~~~~~~~l~G~~~g~~~~~~~~~~~e~~-~~~~rg~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~~~ 228 (333)
..+++.+++.+++.+.......++..|.. ++++|++..++.+.+..+|.++++.+... .+|++.+++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~ 179 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVL 179 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHH
Confidence 56667778888888877777788888887 57889999998887777776655443221 2688888888
Q ss_pred HHHHHHHHHH-hhcccCC
Q psy15539 229 ALLPIFFVGL-MLLMPES 245 (333)
Q Consensus 229 ~~~~~~~~~~-~~~~~e~ 245 (333)
+++.++..+. .++.+|+
T Consensus 180 ~~l~~~~~~~~~~~~~e~ 197 (437)
T TIGR00792 180 ALIGVVSLIICFFGTKER 197 (437)
T ss_pred HHHHHHHHHHHHcCCEec
Confidence 8777665443 4456664
No 103
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.53 E-value=8.6e-14 Score=126.84 Aligned_cols=144 Identities=15% Similarity=0.120 Sum_probs=119.9
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVV 181 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~ 181 (333)
.+.+..+.+++.++..++..++.+++|++.||+|+|+.+.++.++.+++.++.++.++.+.+++.+++.|++.+...+..
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGV 336 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566778999999999999999999999999999999999999999888888888898888899999999988877788
Q ss_pred hhhhcccCCCcchhhHHHH-HHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH-hhcccCC
Q psy15539 182 PMYTAEIAETEIRGTLGTY-FQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGL-MLLMPES 245 (333)
Q Consensus 182 ~~~~~e~~~~~~rg~~~~~-~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~e~ 245 (333)
..++.|.+|++.|++..+. ++....+|.++++.+.+++ ||+..|.+.+++.++..+. .+..++.
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8899999999999887665 6777888999988888877 7888888877776654433 3344443
No 104
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.53 E-value=9.4e-13 Score=112.19 Aligned_cols=220 Identities=15% Similarity=0.131 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy15539 68 YMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPT 147 (333)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 147 (333)
+..+..+.+..+..-...+.+++.++.+.++ +|.|.+..|+++++..+...+.+++..+++.|+|.++.+.+++++.
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~---~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli 87 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQD---LGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLI 87 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHH---hcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHH
Confidence 4445555555555666677888899999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHH
Q psy15539 148 LVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVY 222 (333)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~ 222 (333)
+++.++-... +...++.+-.+.|.+.+......+..+.+.||++ -+..+++|....++|..+++.+...+ +|+
T Consensus 88 ~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~ 165 (395)
T COG2807 88 AAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWR 165 (395)
T ss_pred HHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHH
Confidence 9999998877 7788899999999999999999999999999854 58889998888888777766665444 799
Q ss_pred HHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHhhccCccchHhhhcChhh
Q psy15539 223 GLSIICALLPIFFVGLMLLMPESPQFHLKKNRVKQAKESLQWFRGSEYDIDSEITDMQNSLEKERSDKVPLMQAFSTPAA 302 (333)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (333)
....+-+.++++.++.++ |...+. + ......+..+...++|+|.
T Consensus 166 ~aL~~WAl~allAl~~Wl--Pq~~r~-----~----------------------------~~~~~~~~~~~~~vw~~~~- 209 (395)
T COG2807 166 GALGFWALLALLALLIWL--PQALRE-----Q----------------------------AASIATKLVSVRKVWRSPL- 209 (395)
T ss_pred HHHHHHHHHHHHHHHHHh--hhcccc-----c----------------------------ccccccccccccccccCch-
Confidence 998888888887766654 321110 0 0011112222345788874
Q ss_pred HHHHHHHHHHHHHHhhcchhhhhhchhccc
Q psy15539 303 KRGLLIGLGVMFIQQFGGINAVVFYTVKIF 332 (333)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 332 (333)
-+-+.+++..+...++.+..|+|.++
T Consensus 210 ----aW~vtLfmGlqS~~~Y~~~~WLP~il 235 (395)
T COG2807 210 ----AWQVTLFMGLQSLLYYIVIGWLPAIL 235 (395)
T ss_pred ----hHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 44466677777777788999999875
No 105
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.52 E-value=5.5e-13 Score=120.67 Aligned_cols=149 Identities=15% Similarity=0.111 Sum_probs=120.9
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLT 170 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 170 (333)
.+|.+..+ .+.+ ..++..+.+.++..++.++.|++.||+|+|+.+..+.++.+++.++..+.++.+.+++..++.
T Consensus 238 ~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (399)
T PRK05122 238 FITLYYAA---RGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALT 312 (399)
T ss_pred HHHHHHHH---cccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34545544 4442 456667788889999999999999999999999988888888888877778888888889999
Q ss_pred hhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhhcccC
Q psy15539 171 GFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLMLLMPE 244 (333)
Q Consensus 171 G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~e 244 (333)
|++.+..++.....+.|.+|+++||++.++++....+|..+++.+.+++ +|+..+++.+++.++.++..+++++
T Consensus 313 G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 313 GFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999988888888888999999999999999999999988888777666 7888888888777776655554444
No 106
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.52 E-value=1.4e-13 Score=125.07 Aligned_cols=140 Identities=16% Similarity=0.187 Sum_probs=116.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHhhhhhhhhhhh
Q psy15539 106 ESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ----SVIMFCAGRLLTGFGGGSFAVVV 181 (333)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~G~~~g~~~~~~ 181 (333)
.+..+...++..++..++.++.|+++||+|||+++.++.++.+++..+..... +.+.+++..++.|++.+...+..
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678889999999999999999999999999999999998888876666532 24566778999999999888888
Q ss_pred hhhhcccCCCcchhhHHHHHH-HHHHHHHHHHHHHhHHH----------HHHHHHHHHHHHHHHH-HHHhhcccCC
Q psy15539 182 PMYTAEIAETEIRGTLGTYFQ-LQCTAGILFVYAVGSWA----------SVYGLSIICALLPIFF-VGLMLLMPES 245 (333)
Q Consensus 182 ~~~~~e~~~~~~rg~~~~~~~-~~~~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~~e~ 245 (333)
..++.|.+|++.|+++.++.+ ...++|.+++|.+++++ +|+..|++.+++.++. ++..++++|+
T Consensus 330 ~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 330 SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 899999999999999999986 67889999999998876 2788888877776654 4445566766
No 107
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.52 E-value=4.6e-13 Score=118.45 Aligned_cols=153 Identities=22% Similarity=0.262 Sum_probs=134.6
Q ss_pred cchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhH-HHHHHHHHHHHHHHHHHHHhhHHHHHH
Q psy15539 87 WTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKN-TMLLLAVPTLVGWGLIIWSQSVIMFCA 165 (333)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (333)
......|.+.++ .+|.++.+.+++.+...++..++.++.+++.||+|||+ .+.++.++..++.+.....++.+.+.+
T Consensus 193 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 270 (352)
T cd06174 193 GLLTYLPLYLQE--VLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLV 270 (352)
T ss_pred HHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 333446666665 24888899999999999999999999999999999999 999999999999999988888888999
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhhc
Q psy15539 166 GRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLMLL 241 (333)
Q Consensus 166 ~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 241 (333)
..++.|++.+...+....++.|..|+++|++..++.+....+|..+++.+.+.+ +|+..+++.+++.++..+..++
T Consensus 271 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 271 ALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 999999999999999999999999999999999999999999999999998877 7888888888887776655543
No 108
>PRK09952 shikimate transporter; Provisional
Probab=99.49 E-value=1.6e-12 Score=119.15 Aligned_cols=153 Identities=13% Similarity=0.027 Sum_probs=110.7
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH---H-hhHHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW---S-QSVIMFCAG 166 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~-~~~~~~~~~ 166 (333)
..|.+..+ .+|.+......+.....+..+++.++.|+++||+|||+.+..+.++.+++.+.+.. . .+...+++.
T Consensus 272 ~~~~y~~~--~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T PRK09952 272 FALNYSTQ--NLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFS 349 (438)
T ss_pred HHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 34555543 27777766555566667777889999999999999999988887766555443322 1 233444455
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHH-HHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHHHHHHHh
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTY-FQLQCTAGILFVYAVGSWA------SVYGLSIICALLPIFFVGLM 239 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~-~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 239 (333)
.++.|++.+...+..++++.|.+|++.|+++.++ ++.+..+|+.++|.+.+++ +|...+.+.++++++..+..
T Consensus 350 ~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~ 429 (438)
T PRK09952 350 IMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTA 429 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH
Confidence 6667888887788889999999999999999888 5556668888899888776 36777777777777766666
Q ss_pred hcccCC
Q psy15539 240 LLMPES 245 (333)
Q Consensus 240 ~~~~e~ 245 (333)
+.++|+
T Consensus 430 ~~~~~~ 435 (438)
T PRK09952 430 LLMKDN 435 (438)
T ss_pred HHcccc
Confidence 666654
No 109
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.47 E-value=2e-12 Score=115.82 Aligned_cols=149 Identities=17% Similarity=0.133 Sum_probs=119.7
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTG 171 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 171 (333)
+|.+..+ ++|.++.+.+++.+...+...++.++.|++.||+|||+.+.++.++..+..+...+.++.+.+++.+++.|
T Consensus 222 ~~~~~~~--~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 299 (375)
T TIGR00899 222 MPLLIIH--ELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNA 299 (375)
T ss_pred hHHHHHH--HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4545432 27888888998888877778888999999999999999998887776666666666677887888889999
Q ss_pred hhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhhccc
Q psy15539 172 FGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLMLLMP 243 (333)
Q Consensus 172 ~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 243 (333)
++.+...+....++.|..|+ +|+++.++++....+|..++|.+++++ +|+..+++.+++.++..+..++++
T Consensus 300 ~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 300 IFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheec
Confidence 99888888888888998875 567999999888889999999988776 788888888877777666665554
No 110
>PRK12382 putative transporter; Provisional
Probab=99.47 E-value=2.4e-12 Score=116.25 Aligned_cols=145 Identities=13% Similarity=0.051 Sum_probs=119.9
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLT 170 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 170 (333)
..|.+.++ .+.+ ..++..+.+.++..++.++.|++.||+|+|+.+.++..+.+++.++..+.++.+.++++.++.
T Consensus 238 ~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (392)
T PRK12382 238 FVSLYFAS---KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALT 312 (392)
T ss_pred HHHHHHHh---cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 34555555 4544 345666777888899999999999999999999999888888888877778888888889999
Q ss_pred hhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhh
Q psy15539 171 GFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLML 240 (333)
Q Consensus 171 G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 240 (333)
|++.+...+...+.+.|.+|+++||++.++++....+|..++|.+.+++ +|+..+.+.+++.++..+..+
T Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 313 GAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 9999888888888889999999999999999999999999999888876 788888888877776554443
No 111
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.46 E-value=2e-12 Score=117.55 Aligned_cols=152 Identities=11% Similarity=-0.003 Sum_probs=103.3
Q ss_pred hccchhhh-hhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccch-hHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy15539 85 LGWTSPAG-DRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGR-KNTMLLLAVPTLVGWGLIIWSQSVIM 162 (333)
Q Consensus 85 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (333)
.+...+.+ +.+.++ +|.+..+.|++.+++.++..+++++.|.++||+|| |+++.++.++.+++..+..+.++++.
T Consensus 18 ~~~~~~~l~~~l~~~---~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (418)
T TIGR00889 18 WGSWLVTLGSYMSKT---LHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAG 94 (418)
T ss_pred HHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 33443443 444455 89999999999999999999999999999999965 77888888888888888888888999
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhh----c----ccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHH
Q psy15539 163 FCAGRLLTGFGGGSFAVVVPMYT----A----EIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICAL 230 (333)
Q Consensus 163 ~~~~~~l~G~~~g~~~~~~~~~~----~----e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~ 230 (333)
+++.+++.|++.+...+...+.. . |......|.+..|. +|.++++.+++.+ .|. ++++.++
T Consensus 95 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~------lG~~ig~~l~g~l~~~~~~~-~f~~~~~ 167 (418)
T TIGR00889 95 MFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGT------IGFIAAMWAVSLLDIELSNI-QLYITAG 167 (418)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehh------HHHHHHHHHHHHhcccchhH-HHHHHHH
Confidence 99999999987665555444332 2 22222334444442 3444455554444 233 3455555
Q ss_pred HHHHHHHHhhcccCCh
Q psy15539 231 LPIFFVGLMLLMPESP 246 (333)
Q Consensus 231 ~~~~~~~~~~~~~e~~ 246 (333)
..++.++..+++||+|
T Consensus 168 ~~~~~~~~~~~~~e~~ 183 (418)
T TIGR00889 168 SSALLGVFALTLPDIP 183 (418)
T ss_pred HHHHHHHHHhcCCCCC
Confidence 5555444556778765
No 112
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.45 E-value=5.8e-12 Score=113.35 Aligned_cols=145 Identities=12% Similarity=0.084 Sum_probs=124.1
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLL 169 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (333)
...|.+.++ .|.+..+.+.+.+...++..++.++.+++.||+|+|+.+.++.++.++..++.++.++.+.+++..++
T Consensus 226 ~~~~~~l~~---~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l 302 (382)
T TIGR00902 226 GFSAIYWQA---AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQIL 302 (382)
T ss_pred HHHHHHHHH---CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHH
Confidence 345667777 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhhhhhhhcccCCCcchhhHHHHHH-HHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHh
Q psy15539 170 TGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQ-LQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLM 239 (333)
Q Consensus 170 ~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~-~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 239 (333)
.|++.+...+....++.+. |++.|+++.++++ ...++|.++++.+++++ ++ ..|.+.++++++.++..
T Consensus 303 ~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 303 HCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 9999999999999999988 9999999999976 57788999999998887 43 34555555555544333
No 113
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.45 E-value=8.8e-15 Score=135.60 Aligned_cols=244 Identities=14% Similarity=0.127 Sum_probs=3.0
Q ss_pred hhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH--
Q psy15539 80 IMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS-- 157 (333)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-- 157 (333)
......++....++++.+. ++++.++.|++.+.+-++..+..++..++.+|..|.+.+-+|.++.+++++++++-
T Consensus 14 ~q~~~~g~~~~~lttiErR---F~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf 90 (539)
T PF03137_consen 14 FQMMVSGYVNSSLTTIERR---FGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHF 90 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHh
Confidence 3355566777778888888 99999999999999999999999999999999999999999999999999887641
Q ss_pred ----------h--------------------------------------hHHHHHHHHHHHhhhhhhhhhhhhhhhcccC
Q psy15539 158 ----------Q--------------------------------------SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIA 189 (333)
Q Consensus 158 ----------~--------------------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~ 189 (333)
. -+..++++.++.|+|....+++..+|+-|..
T Consensus 91 ~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv 170 (539)
T PF03137_consen 91 LSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNV 170 (539)
T ss_dssp -------------------------------------------------------------SSS----------------
T ss_pred hcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccc
Confidence 0 0246778899999999999999999999999
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHhHHH--------------------------HHHHHHHHHHHHHHHHHHHhhccc
Q psy15539 190 ETEIRGTLGTYFQLQCTAGILFVYAVGSWA--------------------------SVYGLSIICALLPIFFVGLMLLMP 243 (333)
Q Consensus 190 ~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 243 (333)
+++.-+.+.|+......+|.++|.++++.. .|+.-|++.+++.++..+.++++|
T Consensus 171 ~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FP 250 (539)
T PF03137_consen 171 SKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFP 250 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999988887532 377777777777777666667777
Q ss_pred CChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHhhccCccchHhhhcChhhHHHHHHHHHHHHHHhhcchhh
Q psy15539 244 ESPQFHLKKNRVKQAKESLQWFRGSEYDIDSEITDMQNSLEKERSDKVPLMQAFSTPAAKRGLLIGLGVMFIQQFGGINA 323 (333)
Q Consensus 244 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (333)
+.-....+..+.++.++ .+....+.+..++.++.+...+..+.-....+++++|| +++...+..........+
T Consensus 251 k~lp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np-----~f~~~~la~~~~~~~~~G 323 (539)
T PF03137_consen 251 KKLPGTSERQEEKESSE--RKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNP-----VFMCLILAGVFESFIVSG 323 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCcccccchhhhhh--cchhhhhhhcccccccccchhhhhhhHHHHHHHHhcCh-----HHHHHHHHHHHHHHHHHH
Confidence 54321100000000000 00000000000000000000000111123455666666 466666666667777788
Q ss_pred hhhchhcccC
Q psy15539 324 VVFYTVKIFK 333 (333)
Q Consensus 324 ~~~y~~~~~~ 333 (333)
+..|+|.|+|
T Consensus 324 ~~tF~pKylE 333 (539)
T PF03137_consen 324 FATFLPKYLE 333 (539)
T ss_dssp ----------
T ss_pred HHHHHHHHHH
Confidence 9999999986
No 114
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.44 E-value=8.6e-12 Score=112.57 Aligned_cols=171 Identities=11% Similarity=-0.034 Sum_probs=123.0
Q ss_pred HHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHH--HHHHHHHHHHHHHHH-HHhhhccchhHHHHHHHHHH
Q psy15539 71 ALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFI--GSSMALGAVFGSPVV-GNLVDTVGRKNTMLLLAVPT 147 (333)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~-g~l~dr~Grr~~l~~~~~~~ 147 (333)
.+.+...++..|...+...+.+|.+.++ .|.+.++.|++ .++..+..++.+++. ++..||+||||..++...+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~---~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~ 79 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE---DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCL 79 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHH
Confidence 3455566677888888888999999999 89999999997 366688888888888 55799999999876655332
Q ss_pred -HHHHHHHH---HHhh-HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH---
Q psy15539 148 -LVGWGLII---WSQS-VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA--- 219 (333)
Q Consensus 148 -~~~~~~~~---~~~~-~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~--- 219 (333)
++...... ...+ ...++...++.++..+...+....+..|..++++++...+....+..+|.++++....++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~ 159 (390)
T TIGR02718 80 VSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK 159 (390)
T ss_pred HHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222 1222 233344455566667777777777888988888888888888888888888888655443
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhcccC
Q psy15539 220 -SVYGLSIICALLPIFFVGLMLLMPE 244 (333)
Q Consensus 220 -~~~~~~~~~~~~~~~~~~~~~~~~e 244 (333)
+|+..|++.+++.++..+..++++|
T Consensus 160 ~gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 160 FGQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999998887765555554443
No 115
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.44 E-value=1.3e-12 Score=118.45 Aligned_cols=132 Identities=17% Similarity=0.187 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhccc
Q psy15539 109 LSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEI 188 (333)
Q Consensus 109 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~ 188 (333)
.+.+.++..++..++.++.|++.||+|||+.+..+.++..++.+...+.++.+.+++.+++.|++.+...+...+.+.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45566677788889999999999999999999998888888777777777888888899999999999999888888899
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhh
Q psy15539 189 AETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLML 240 (333)
Q Consensus 189 ~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 240 (333)
.|++.||+..++.+....+|..++|.+++++ +|+..|++.+++.++..+..+
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998876 788888888877776554443
No 116
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.44 E-value=4.5e-12 Score=117.14 Aligned_cols=151 Identities=15% Similarity=0.042 Sum_probs=107.5
Q ss_pred chhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH--HHHhhHHHHHH
Q psy15539 88 TSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLI--IWSQSVIMFCA 165 (333)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~--~~~~~~~~~~~ 165 (333)
....+|.|.++ .+|.+..+.++..+...++..++.++.|+++||+|||+.++.+..+..++..+. ....+.....+
T Consensus 277 ~~~~~p~yl~~--~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (467)
T PRK09556 277 IDNWSPVYAFQ--ELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLA 354 (467)
T ss_pred HHHHHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 34446766643 389999999999999999999999999999999999988766544444333222 23345556667
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHH-HHHHHHHHhHHH----------------HHHHHHHHH
Q psy15539 166 GRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTA-GILFVYAVGSWA----------------SVYGLSIIC 228 (333)
Q Consensus 166 ~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~~----------------~~~~~~~~~ 228 (333)
.+++.|++..+..........|.+|++.||++.|+.+....+ |..++|.+.+++ +|+..|++.
T Consensus 355 ~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~ 434 (467)
T PRK09556 355 SLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAAL 434 (467)
T ss_pred HHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHH
Confidence 788888654433333345677999999999999998877775 666776665544 388888877
Q ss_pred HHHHHHHHHHhh
Q psy15539 229 ALLPIFFVGLML 240 (333)
Q Consensus 229 ~~~~~~~~~~~~ 240 (333)
+++.++..+..+
T Consensus 435 ~~~~~~~~~~~~ 446 (467)
T PRK09556 435 DIAAIGCICLMA 446 (467)
T ss_pred HHHHHHHHHHHH
Confidence 666666544444
No 117
>KOG3626|consensus
Probab=99.43 E-value=6.8e-13 Score=123.68 Aligned_cols=248 Identities=15% Similarity=0.165 Sum_probs=178.9
Q ss_pred HHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Q psy15539 70 AALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLV 149 (333)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~ 149 (333)
.+.+.++..+..++..+++...+.++.+. ++++.++.|++.+.+-++..+...+..++.-|..|.+.+-+|.+++++
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErR---F~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERR---FKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhh---cCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 34444555566666667777778888887 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH--------------------h--------------------------------hHHHHHHHHHHHhhhhhhh
Q psy15539 150 GWGLIIWS--------------------Q--------------------------------SVIMFCAGRLLTGFGGGSF 177 (333)
Q Consensus 150 ~~~~~~~~--------------------~--------------------------------~~~~~~~~~~l~G~~~g~~ 177 (333)
+++++++- + -+..++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 99988651 0 0225667799999999999
Q ss_pred hhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----------------------HHHHHHHHHHHHHHH
Q psy15539 178 AVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----------------------SVYGLSIICALLPIF 234 (333)
Q Consensus 178 ~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~ 234 (333)
++...+|+-|...+++-+..+|+......+|.++|.++++.. .|+.-|++++.+.++
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998654 578888888888888
Q ss_pred HHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHhhccCccchHhhhcChhhHHHHHHHHHHHH
Q psy15539 235 FVGLMLLMPESPQFHLKKNRVKQAKESLQWFRGSEYDIDSEITDMQNSLEKERSDKVPLMQAFSTPAAKRGLLIGLGVMF 314 (333)
Q Consensus 235 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (333)
..+.++++|.......++ .++ .+.+..+++.. ..++.....++-+.-...++++++|| +++.+++..
T Consensus 335 ~a~p~f~fPk~lp~~~~~---~~~----~~~~~~k~~~~-~~~~~~~~~~~ikdfp~s~~~ll~N~-----if~~~~l~~ 401 (735)
T KOG3626|consen 335 SAVPLFFFPKELPKSQKR---KRA----RDLHVLKTESG-GAKSDKTFGKKIKDFPKSIKRLLSNP-----IFMLVVLAS 401 (735)
T ss_pred HHHHHHhCcccCcccccc---chh----hhhcccccccc-cccCCcchhhhHHHHHHHHHHHhcCc-----hHHHHHHHH
Confidence 888888888654321111 000 00000000000 00000000000001123567788887 355566666
Q ss_pred HHhhcchhhhhhchhcccC
Q psy15539 315 IQQFGGINAVVFYTVKIFK 333 (333)
Q Consensus 315 ~~~~~~~~~~~~y~~~~~~ 333 (333)
......+.++..|+|.|+|
T Consensus 402 ~~~~~~~~G~~tFlPKyLE 420 (735)
T KOG3626|consen 402 VIESLAITGYITFLPKYLE 420 (735)
T ss_pred HHHHHHHhhHHHhhHHHHH
Confidence 6667778899999999875
No 118
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.43 E-value=3.8e-12 Score=117.50 Aligned_cols=157 Identities=14% Similarity=0.003 Sum_probs=116.6
Q ss_pred cchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH-----h---
Q psy15539 87 WTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS-----Q--- 158 (333)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~--- 158 (333)
......|.+.++ .|.+..+.++......++.+++.++.|+++||+|||+.+.++.++.+++.++..+. .
T Consensus 302 ~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (481)
T TIGR00879 302 AIMYYSPTIFEN---AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSS 378 (481)
T ss_pred ehHHHHHHHHHH---cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcc
Confidence 334456777777 88888888999999999999999999999999999999999888877776666521 1
Q ss_pred ---hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHH
Q psy15539 159 ---SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALL 231 (333)
Q Consensus 159 ---~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~ 231 (333)
+...+....++.+....+..+....++.|.+|++.|+++.++.+....+|.++++.+.+++ +|++.|++.+++
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~ 458 (481)
T TIGR00879 379 KSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGL 458 (481)
T ss_pred cchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHH
Confidence 2222233333333322334466677789999999999999999999999999999887765 678888887777
Q ss_pred HHHHHHHh-hcccCCh
Q psy15539 232 PIFFVGLM-LLMPESP 246 (333)
Q Consensus 232 ~~~~~~~~-~~~~e~~ 246 (333)
+++..+.. ++.||++
T Consensus 459 ~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 459 NVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHheecccCC
Confidence 76654444 4566653
No 119
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.42 E-value=5.5e-12 Score=113.33 Aligned_cols=150 Identities=14% Similarity=0.001 Sum_probs=104.9
Q ss_pred cchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHH--HHHHH------HHHHHHHHHHHHHh
Q psy15539 87 WTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNT--MLLLA------VPTLVGWGLIIWSQ 158 (333)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~--l~~~~------~~~~~~~~~~~~~~ 158 (333)
......|.+..+ .+|.+..+.+++.+...++..++.++.|+++||+|||+. ..... ++..+........+
T Consensus 233 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (399)
T TIGR00893 233 FFLTWFPTYLVQ--ERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN 310 (399)
T ss_pred HHHHHHHHHHHH--HhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch
Confidence 333445666544 278888899999999999999999999999999999962 11111 11111111111122
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----H-HHHHHHHHHHHHH
Q psy15539 159 SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----S-VYGLSIICALLPI 233 (333)
Q Consensus 159 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~-~~~~~~~~~~~~~ 233 (333)
+....+...++.+++.+ ..+...+++.|.+|++.|+++.++.+....+|..++|.+.+++ + |+..+++.+++.+
T Consensus 311 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~ 389 (399)
T TIGR00893 311 IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALAL 389 (399)
T ss_pred hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHH
Confidence 33333333444444444 7888999999999999999999999999999999999998877 5 8888887777766
Q ss_pred HHHHHh
Q psy15539 234 FFVGLM 239 (333)
Q Consensus 234 ~~~~~~ 239 (333)
+..+..
T Consensus 390 ~~~~~~ 395 (399)
T TIGR00893 390 IGALSY 395 (399)
T ss_pred HHHHHH
Confidence 654443
No 120
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.42 E-value=9.3e-12 Score=112.79 Aligned_cols=148 Identities=14% Similarity=0.070 Sum_probs=111.4
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHH-HHHHHHHHHHHHHHH-----HhhHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTML-LLAVPTLVGWGLIIW-----SQSVIMF 163 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~-----~~~~~~~ 163 (333)
...|.+.++ .|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.+.. .++.+..
T Consensus 243 ~~~p~~~~~---~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~ 319 (402)
T TIGR00897 243 VFLPMFVAE---LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVA 319 (402)
T ss_pred HHHHHHHHH---cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHH
Confidence 346778877 8999889999999999999999999999999999988764 333334443333322 2355666
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHh
Q psy15539 164 CAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLM 239 (333)
Q Consensus 164 ~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 239 (333)
+++.++.|++.+...+. ...+.|..| ++||++.|+.+....+|..++|.+++.+ +|+..+++.+++.++..+..
T Consensus 320 ~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~ 397 (402)
T TIGR00897 320 LIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLT 397 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Confidence 77788888887766543 455667654 6899999999999999999999998777 78888888887776655554
Q ss_pred hcc
Q psy15539 240 LLM 242 (333)
Q Consensus 240 ~~~ 242 (333)
+|+
T Consensus 398 ~~~ 400 (402)
T TIGR00897 398 AFI 400 (402)
T ss_pred HHh
Confidence 443
No 121
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.42 E-value=8.2e-12 Score=113.71 Aligned_cols=154 Identities=16% Similarity=0.119 Sum_probs=123.5
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLT 170 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 170 (333)
..|.+.++ .+|.+....+++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.....++.++.
T Consensus 245 ~~p~~~~~--~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (417)
T PRK10489 245 LYPALADE--VWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALF 322 (417)
T ss_pred hhHHHHHh--ccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 35666554 3788888999999999999999999999999998888888888888888877777778887778888899
Q ss_pred hhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHH-HHHHhhcccCC
Q psy15539 171 GFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIF-FVGLMLLMPES 245 (333)
Q Consensus 171 G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~e~ 245 (333)
|++.+...+...+++.|..|++.||++.++++....+|..+++.+.+++ +++..+++.+++.++ .++....+++.
T Consensus 323 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (417)
T PRK10489 323 GYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGEL 402 (417)
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccc
Confidence 9988877777888999999999999999999988889999999888877 455556555554443 44444555655
Q ss_pred h
Q psy15539 246 P 246 (333)
Q Consensus 246 ~ 246 (333)
+
T Consensus 403 ~ 403 (417)
T PRK10489 403 R 403 (417)
T ss_pred c
Confidence 3
No 122
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.41 E-value=3e-12 Score=115.15 Aligned_cols=143 Identities=16% Similarity=0.140 Sum_probs=108.1
Q ss_pred chhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH--HHHHHH--hhHHHH
Q psy15539 88 TSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGW--GLIIWS--QSVIMF 163 (333)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~~~~~--~~~~~~ 163 (333)
.....|.+.++ ++|.+..+.+.+.+...++..++.++.|+++||+|||+.+..+..+..+.. +...+. .+.+.+
T Consensus 238 ~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (394)
T TIGR00883 238 ITTYLPTYLTQ--TLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLF 315 (394)
T ss_pred HHHHHHHHHHH--hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 33446666633 278888899999999999999999999999999999998776554444333 222222 456666
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHH-HHHHHHHHHHHHHHHhHHH----H-HHHHHHHHHHHH
Q psy15539 164 CAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTY-FQLQCTAGILFVYAVGSWA----S-VYGLSIICALLP 232 (333)
Q Consensus 164 ~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~-~~~~~~~g~~~~~~~~~~~----~-~~~~~~~~~~~~ 232 (333)
++..++.|++.+...+...+++.|.+|++.|+++.++ ++.+..+|..++|.+++++ + |+..++..++.+
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 316 FFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 7778888988888889999999999999999999987 5667778888888888776 3 666555544433
No 123
>KOG2325|consensus
Probab=99.41 E-value=5.6e-12 Score=113.11 Aligned_cols=178 Identities=16% Similarity=0.169 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHhhhhhhhccchhhh-hhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccch-hHHHHHHH
Q psy15539 67 QYMAALTATIGGFIMGTILGWTSPAG-DRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGR-KNTMLLLA 144 (333)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~ 144 (333)
.|+.+.++.+..++.+...+++.+.. |+..+- +.+.+.+..|++.++..+|.+++++++|+...|.|. |+.++.|.
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~l--D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ 109 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKL--DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF 109 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhc--CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH
Confidence 34556666666677776666666554 434332 356677789999999999999999999999999996 88899999
Q ss_pred HHHHHHHHHH-HHH---h-hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 145 VPTLVGWGLI-IWS---Q-SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 145 ~~~~~~~~~~-~~~---~-~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
++..+++++. .+. + ..+.++++|++.|+|.| .....-+|+++....+.|.++++....+..+|..+||.+...+
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 9999999988 332 3 57889999999999987 5677889999988889999999998888888888888886654
Q ss_pred -----------------HHHHHHHHHHHHHHHHH-HHhhcccCChH
Q psy15539 220 -----------------SVYGLSIICALLPIFFV-GLMLLMPESPQ 247 (333)
Q Consensus 220 -----------------~~~~~~~~~~~~~~~~~-~~~~~~~e~~~ 247 (333)
-+..+.++.+++.++.+ ++.++++|.++
T Consensus 189 ~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 189 TPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred hhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 12345566666666543 34446677643
No 124
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.41 E-value=1e-11 Score=111.72 Aligned_cols=144 Identities=15% Similarity=0.174 Sum_probs=115.1
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLT 170 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 170 (333)
.+|.+.++ .|.+..+.+++.+...++..+++++.|++.||+|+|+.+..+.++.+++.+... . ........++.
T Consensus 222 ~lp~~~~~---~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~ 295 (381)
T PRK03633 222 LMPLYLNH---QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFIL 295 (381)
T ss_pred HHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHH
Confidence 46777777 788888999999999999999999999999999999999888877777665443 2 22334566777
Q ss_pred hhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhh
Q psy15539 171 GFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLML 240 (333)
Q Consensus 171 G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 240 (333)
|++.+...|...+.+.|..|+++++...+..+....+|.+++|.+++++ +|++.|++.+.+.++..+..+
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 8777777888888899999988888888888888999999999998877 677788877777665544444
No 125
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.40 E-value=2.3e-11 Score=112.77 Aligned_cols=154 Identities=13% Similarity=-0.040 Sum_probs=109.1
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh--hH--HHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ--SV--IMFCA 165 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~--~~~~~ 165 (333)
...|.+.++ .|.+.....+......++..++.++.++++||+|||++++.+.++.+++.+++.... +. .....
T Consensus 292 ~~~p~i~~~---~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 292 YYAPEIFKT---LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred HHHHHHHHH---cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 345777676 888877777777788889999999999999999999999999999888877765432 11 12222
Q ss_pred HHHHHhhhhhh-hhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHH----------HHHHHHHHHHHHHHHH
Q psy15539 166 GRLLTGFGGGS-FAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSW----------ASVYGLSIICALLPIF 234 (333)
Q Consensus 166 ~~~l~G~~~g~-~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 234 (333)
+.++.+++.+. ..+..+.++.|.+|+++|+++.++.+....+|..+++.+.+. .+|+..+++.++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVL 448 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHH
Confidence 33344444333 236678899999999999999999888888888776544332 2566667776666555
Q ss_pred HHHH-hhcccCCh
Q psy15539 235 FVGL-MLLMPESP 246 (333)
Q Consensus 235 ~~~~-~~~~~e~~ 246 (333)
..+. +++.||++
T Consensus 449 ~~~~~~~~~~e~~ 461 (479)
T PRK10077 449 AALFMWKFVPETK 461 (479)
T ss_pred HHHHHHhccccCC
Confidence 4443 44567764
No 126
>KOG0569|consensus
Probab=99.40 E-value=5e-11 Score=107.75 Aligned_cols=156 Identities=12% Similarity=0.031 Sum_probs=110.8
Q ss_pred cchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh---hHH--
Q psy15539 87 WTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ---SVI-- 161 (333)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~-- 161 (333)
.+..+...+.++ .|++..++.+.+....+...+..+++.++.||+|||+.++++..++.+..+++.... +..
T Consensus 288 ai~~Yst~i~~~---aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~ 364 (485)
T KOG0569|consen 288 AIFFYSTSIFKT---AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGS 364 (485)
T ss_pred eeHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 344445556666 899999999999999999999999999999999999999999999988887776531 111
Q ss_pred ----HHHHHHHHHhhhhh-hhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhH----HHHHHHHHHHHHHHH
Q psy15539 162 ----MFCAGRLLTGFGGG-SFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGS----WASVYGLSIICALLP 232 (333)
Q Consensus 162 ----~~~~~~~l~G~~~g-~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~ 232 (333)
..+++.++..++.+ +..|+.+-+.+|++|++.|+.+.++......++..+....-. .+|- +.|++..+.+
T Consensus 365 ~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~ 443 (485)
T KOG0569|consen 365 WLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPL 443 (485)
T ss_pred HHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHH
Confidence 12233333333222 235777888999999999999999877766666655443333 3343 4555555555
Q ss_pred HH-HHHHhhcccCCh
Q psy15539 233 IF-FVGLMLLMPESP 246 (333)
Q Consensus 233 ~~-~~~~~~~~~e~~ 246 (333)
++ .+..+.++|||+
T Consensus 444 ~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 444 AIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHHHHhCcccC
Confidence 54 556677899995
No 127
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.40 E-value=2.9e-12 Score=117.85 Aligned_cols=145 Identities=9% Similarity=-0.029 Sum_probs=117.1
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhcc--chhHHHHH--HHHHHHHHHHHHHHHhhHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTV--GRKNTMLL--LAVPTLVGWGLIIWSQSVIMFCA 165 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--Grr~~l~~--~~~~~~~~~~~~~~~~~~~~~~~ 165 (333)
..+|.+.++ .|.+..+.+++.++..++..++.++.|+++||. ++|+...+ +.++.+++.+++...++.+.+++
T Consensus 262 ~~l~~~~~~---~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i 338 (455)
T TIGR00892 262 IFLVPYAKD---KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVI 338 (455)
T ss_pred HHHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 346777776 799999999999999999999999999999973 34443333 33444455555666778888889
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHH
Q psy15539 166 GRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVYGLSIICALLPIFFVG 237 (333)
Q Consensus 166 ~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 237 (333)
.+++.|++.+...+...+++.|.+|+++++++.++++....+|.+++|.+++++ +|+..|++.+++.++..+
T Consensus 339 ~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 339 YCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999999998899999999999999999999999999999999999998865 478888887776655443
No 128
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.39 E-value=8.8e-12 Score=116.25 Aligned_cols=134 Identities=20% Similarity=0.072 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHhhhhhhhhhhhhhhhcccC
Q psy15539 114 SSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQS----VIMFCAGRLLTGFGGGSFAVVVPMYTAEIA 189 (333)
Q Consensus 114 ~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~ 189 (333)
.+..++..++.+++++++||+|||+.++++.++.+++.++..+..+ ...+...-+...++..+..+..+.+.+|.+
T Consensus 342 ~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 421 (502)
T TIGR00887 342 IIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF 421 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC
Confidence 3445566778899999999999999998888877777665554321 111111111122222234456777889999
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHhHHH-H-------------HHHHHHHHHHHHHHHHHHhhcccCChH
Q psy15539 190 ETEIRGTLGTYFQLQCTAGILFVYAVGSWA-S-------------VYGLSIICALLPIFFVGLMLLMPESPQ 247 (333)
Q Consensus 190 ~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~e~~~ 247 (333)
|++.|+++.++.+....+|.++++.+.+.+ . +...+++.++++++..+..+++||++.
T Consensus 422 p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 422 PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCC
Confidence 999999999999999999999998887655 2 234566666666665555667898753
No 129
>PRK03699 putative transporter; Provisional
Probab=99.39 E-value=6.2e-12 Score=113.66 Aligned_cols=152 Identities=13% Similarity=0.057 Sum_probs=119.3
Q ss_pred hhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy15539 89 SPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRL 168 (333)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (333)
...+|.+.++ .+|.+..+.+++.+.+.++..++.++.|+++||+|||+.+.....+.++..++....++...+.+..+
T Consensus 225 ~~~~p~~l~~--~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (394)
T PRK03699 225 ISWVPEYAQK--KFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAIL 302 (394)
T ss_pred HHHHHHHHHH--HcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 3456777754 27999999999999999999999999999999999999998887777776666666677766777788
Q ss_pred HHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhhccc
Q psy15539 169 LTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLMLLMP 243 (333)
Q Consensus 169 l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 243 (333)
+.|++.+..++...++..|..| +.++...+.......+|..++|.+.+++ +++..+++.+++.++..+.....+
T Consensus 303 ~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 303 GLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHH
Confidence 8898888888888878888775 4467778887778889999999988776 777777777766666544444433
No 130
>PRK03545 putative arabinose transporter; Provisional
Probab=99.38 E-value=3.1e-11 Score=108.91 Aligned_cols=137 Identities=12% Similarity=0.040 Sum_probs=108.1
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH-HHHHHhhHHHHHHHHHHHhhhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWG-LIIWSQSVIMFCAGRLLTGFGGGSFAVV 180 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~G~~~g~~~~~ 180 (333)
.|.+..+.+++.+...++..++.++.|+++||+|||+.. .+..+..++.. +....++.+.++++.++.|++.+...+.
T Consensus 236 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 314 (390)
T PRK03545 236 AGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLA 314 (390)
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHH
Confidence 788888999999999999999999999999999988754 44444444433 3345567777888888999988777777
Q ss_pred hhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhh
Q psy15539 181 VPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLML 240 (333)
Q Consensus 181 ~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 240 (333)
..+.+.+..| +.|+++.++++....+|..+|+.+++++ +++..+++.+++.++.++..+
T Consensus 315 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 315 MQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSI 377 (390)
T ss_pred HHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHH
Confidence 7778888776 6889999998888888998899888876 788888888877776554443
No 131
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.38 E-value=2.8e-11 Score=112.02 Aligned_cols=147 Identities=15% Similarity=0.101 Sum_probs=119.5
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH-----hhHHHHHHH
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS-----QSVIMFCAG 166 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 166 (333)
.+.+..+ ..-|+...+++.++..+-.++.++++|.++||+.||++++.+-++.++..+..++. .+.+.+++.
T Consensus 33 ~~wlv~~---lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~ 109 (524)
T PF05977_consen 33 LAWLVTQ---LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLIL 109 (524)
T ss_pred HHHHHHH---HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHH
Confidence 3444445 66777889999999999999999999999999999999999888776655544432 378889999
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhhc
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLMLL 241 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 241 (333)
-++.|++.+...|...+++.|+.|+++...+.++.++...++.++||.+++.+ |-.+.|++-++..++.++....
T Consensus 110 ~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~ 188 (524)
T PF05977_consen 110 TFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLR 188 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998876 5556666665554444433333
No 132
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.38 E-value=5.7e-12 Score=113.95 Aligned_cols=127 Identities=14% Similarity=0.089 Sum_probs=103.0
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHH-HHHHHhhHHHHHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWG-LIIWSQSVIMFCAGRLL 169 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 169 (333)
.+|.+..+ ++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++.++..+ ......+.+.+.+..++
T Consensus 260 ~~~~~~~~--~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (405)
T TIGR00891 260 LLPTYLKA--DLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFF 337 (405)
T ss_pred hhHHHHHH--HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 35555543 2789999999999999999999999999999999999998887776544333 23334455666666677
Q ss_pred HhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 170 TGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 170 ~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.|++.++..+...+++.|.+|++.|+++.|+.+....+|..++|.+.+++
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l 387 (405)
T TIGR00891 338 QQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALL 387 (405)
T ss_pred HHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 77777777788888999999999999999999999999999999998887
No 133
>TIGR00898 2A0119 cation transport protein.
Probab=99.37 E-value=2.8e-11 Score=113.02 Aligned_cols=136 Identities=20% Similarity=0.125 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHhhhhhhhhhhhhhhhccc
Q psy15539 111 FIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSV--IMFCAGRLLTGFGGGSFAVVVPMYTAEI 188 (333)
Q Consensus 111 ~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~G~~~g~~~~~~~~~~~e~ 188 (333)
+...+..+..+++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++..++.+++.+..++..+.+.+|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33445567778889999999999999999999999988888877776543 4455556677777777888889999999
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHhHHH--HHHHHHHHHHHHHHHHHHHhhcccCCh
Q psy15539 189 AETEIRGTLGTYFQLQCTAGILFVYAVGSWA--SVYGLSIICALLPIFFVGLMLLMPESP 246 (333)
Q Consensus 189 ~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~e~~ 246 (333)
+|++.|++++|+.+....+|.+++|.+.+.. ++...+++.++..++..+..+++||+.
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 9999999999999999999999999998733 455677777777777666677888874
No 134
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.36 E-value=4.3e-11 Score=109.66 Aligned_cols=155 Identities=13% Similarity=0.063 Sum_probs=129.3
Q ss_pred hhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchh--HHHHHHHHHHHHHHHHHHH--------Hh
Q psy15539 89 SPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRK--NTMLLLAVPTLVGWGLIIW--------SQ 158 (333)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------~~ 158 (333)
......+.++ .+|++..+...+..+..+..++|++++|++.||+|.| ++++++.+++.+..+.-.+ ..
T Consensus 301 ~~~~~i~a~~--~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~ 378 (477)
T PF11700_consen 301 ISFAGIYATE--VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLK 378 (477)
T ss_pred HHHHHHHHHH--hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcc
Confidence 3334445553 3999999999999999999999999999999999999 8888888887666555554 56
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHH
Q psy15539 159 SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVYGLSIICALLPI 233 (333)
Q Consensus 159 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~ 233 (333)
+.+.+.+..++.|+..|+.++..-++.+|+.|+++.+...|++.+.....+.+||.+.+.+ +.|+.+....++.+
T Consensus 379 ~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~ 458 (477)
T PF11700_consen 379 SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFL 458 (477)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 7888999999999999999999999999999999999999999999999999999998877 35677777777766
Q ss_pred HHHHHhhcccCC
Q psy15539 234 FFVGLMLLMPES 245 (333)
Q Consensus 234 ~~~~~~~~~~e~ 245 (333)
+.+++.++++..
T Consensus 459 ~gl~ll~~v~~~ 470 (477)
T PF11700_consen 459 IGLILLFFVDVE 470 (477)
T ss_pred HHHHHHhhccch
Confidence 666666666543
No 135
>TIGR00895 2A0115 benzoate transport.
Probab=99.36 E-value=1.7e-11 Score=110.43 Aligned_cols=127 Identities=19% Similarity=0.071 Sum_probs=103.5
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLL 169 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (333)
...|.+.++ .|.+..+.+++.+...++..++.++.|+++||+|||+.+....+......++.....+...+++..++
T Consensus 271 ~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (398)
T TIGR00895 271 NWLPKLMVE---LGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAI 347 (398)
T ss_pred HHHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 345666666 88888899999999999999999999999999999955444433333333333335567777888899
Q ss_pred HhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 170 TGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 170 ~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.|++.+...+...+++.|.+|+++|+++.|+.+....+|..++|.+.+++
T Consensus 348 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 348 AGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999999999999987753
No 136
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.35 E-value=3.2e-11 Score=110.34 Aligned_cols=152 Identities=12% Similarity=-0.001 Sum_probs=96.1
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH--H--HhhHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLII--W--SQSVIMFCA 165 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~~~~~ 165 (333)
..+|.+..+ .+|.+..+.+...++..++..+++++.|+++||+|||+.+.++.++.++..+... . ..+....+.
T Consensus 264 ~~lp~~l~~--~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 264 TYMQKYLVN--TAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred HHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 346666643 2788888888888888888899999999999999999988776655443333221 1 112222222
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHH-HHHHHHHHHHHHhHHH---H-HHHHHHHHHHHHHHHHHHhh
Q psy15539 166 GRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQL-QCTAGILFVYAVGSWA---S-VYGLSIICALLPIFFVGLML 240 (333)
Q Consensus 166 ~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~-~~~~g~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~ 240 (333)
.-++.+++.+...+....+++|++|++.|+++.|+.+. +..++....|.+..++ + |...+++.++..++.++..+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 342 LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 22222233334445567788999999999999999654 4444344466665555 2 44555555555555555555
Q ss_pred ccc
Q psy15539 241 LMP 243 (333)
Q Consensus 241 ~~~ 243 (333)
+++
T Consensus 422 ~l~ 424 (432)
T PRK10406 422 MLH 424 (432)
T ss_pred Hhh
Confidence 443
No 137
>PRK09669 putative symporter YagG; Provisional
Probab=99.35 E-value=1.4e-11 Score=113.06 Aligned_cols=143 Identities=17% Similarity=0.212 Sum_probs=100.4
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhc----cchh-HHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHH
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDT----VGRK-NTMLLLAVPTLVGWGLIIWSQS------VIMFCAGRLLT 170 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~ 170 (333)
+|++...+|.+.++..+..++..|+.|+++|| +||| +.++.+.+..+++.++....++ ...+++..++.
T Consensus 40 ~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~ 119 (444)
T PRK09669 40 FGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILL 119 (444)
T ss_pred cCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 7775 4555677777777665554432 34555556666
Q ss_pred hhhhhhhhhhhhhhhcccC-CCcchhhHHHHHHHHHHHHHHHHHHHh----HHH-------HHHHHHHHHHHHHHHHHHH
Q psy15539 171 GFGGGSFAVVVPMYTAEIA-ETEIRGTLGTYFQLQCTAGILFVYAVG----SWA-------SVYGLSIICALLPIFFVGL 238 (333)
Q Consensus 171 G~~~g~~~~~~~~~~~e~~-~~~~rg~~~~~~~~~~~~g~~~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~ 238 (333)
+.+.........++.+|+. ++++|.+..++...+..+|..+++.+. ... +|+..+.+.++++++..+.
T Consensus 120 ~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 120 SLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 7666666667778889987 568899887777666666666555432 221 5676676666666554333
Q ss_pred -hhcccC
Q psy15539 239 -MLLMPE 244 (333)
Q Consensus 239 -~~~~~e 244 (333)
++..+|
T Consensus 200 ~~~~~~e 206 (444)
T PRK09669 200 CFFMTKE 206 (444)
T ss_pred HhCCeEE
Confidence 333444
No 138
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.35 E-value=3.4e-11 Score=108.76 Aligned_cols=152 Identities=14% Similarity=0.106 Sum_probs=114.3
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ-SVIMFCAGRL 168 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 168 (333)
...|.+..+ .|.+..+.+.+.+.+.++..++.++.|++.||+|||+.+.++..+..++.++....+ +...+ ..+
T Consensus 226 ~~lp~~l~~---~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~ 300 (393)
T PRK09705 226 AWLPAFYIE---IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAM 300 (393)
T ss_pred HHHHHHHHH---cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHH
Confidence 346777777 799999999999999999999999999999999999999888877777766554323 22222 234
Q ss_pred HHhhhhhhhhhhhhhhhcccCC-CcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHH-hhc
Q psy15539 169 LTGFGGGSFAVVVPMYTAEIAE-TEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVYGLSIICALLPIFFVGL-MLL 241 (333)
Q Consensus 169 l~G~~~g~~~~~~~~~~~e~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~ 241 (333)
+.|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++ +|...+++.++.+++..++ ..+
T Consensus 301 l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK09705 301 VCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRF 380 (393)
T ss_pred HHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 5677777777777766667764 67899999998888888899999998887 3566666666666554433 446
Q ss_pred ccCCh
Q psy15539 242 MPESP 246 (333)
Q Consensus 242 ~~e~~ 246 (333)
.||++
T Consensus 381 ~~~~~ 385 (393)
T PRK09705 381 APARF 385 (393)
T ss_pred ccccc
Confidence 67764
No 139
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.34 E-value=5.3e-11 Score=109.56 Aligned_cols=150 Identities=13% Similarity=0.060 Sum_probs=98.5
Q ss_pred hhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhcc--chhHHH-HHHHHHHHHHHHHHHH--HhhHHHH
Q psy15539 89 SPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTV--GRKNTM-LLLAVPTLVGWGLIIW--SQSVIMF 163 (333)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--Grr~~l-~~~~~~~~~~~~~~~~--~~~~~~~ 163 (333)
...+|.+.++ ..|.+..+.+++...+.++..++.++.|+++||+ |||+.. +....+..++.+...+ ..+....
T Consensus 273 ~~~~P~~l~~--~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 350 (452)
T PRK11273 273 LDWSPTYLKE--VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVD 350 (452)
T ss_pred HHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHH
Confidence 3457777765 2678888889988899999999999999999999 555432 2222333333332222 2234444
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHH-HHHHHhHHH----HHHHHHHHHHHHHHHHHHH
Q psy15539 164 CAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGIL-FVYAVGSWA----SVYGLSIICALLPIFFVGL 238 (333)
Q Consensus 164 ~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 238 (333)
+++.++.|.+..+.......+..|.+|++.||++.|+.+....+|+. ++|.+.+++ +|+..|++.++.+++.++.
T Consensus 351 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~ 430 (452)
T PRK11273 351 MACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 430 (452)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 44455555543333333345677999999999999998877777654 467776655 7888888777776665444
Q ss_pred hh
Q psy15539 239 ML 240 (333)
Q Consensus 239 ~~ 240 (333)
..
T Consensus 431 ~~ 432 (452)
T PRK11273 431 LI 432 (452)
T ss_pred HH
Confidence 33
No 140
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.33 E-value=2.9e-11 Score=112.60 Aligned_cols=141 Identities=11% Similarity=-0.003 Sum_probs=106.6
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS--QSVIMFCAGR 167 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 167 (333)
..+|.+.++ ++|.+..+.+++.+...++..++.++.|+++||+|||+++.++.++..+..++.... .+.+.+.+..
T Consensus 296 ~~lp~~l~~--~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 296 ALLPTYLKT--DLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 457778753 289999999999999999999999999999999999999888877666665544332 2333444444
Q ss_pred HHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHH
Q psy15539 168 LLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLP 232 (333)
Q Consensus 168 ~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~ 232 (333)
++.++...+..+..+.++.|.+|++.||+++++.+....+|..++|.+++.+ +|+..+...+...
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHH
Confidence 5444433344566777889999999999999999888899999999998877 5666655444333
No 141
>PRK10504 putative transporter; Provisional
Probab=99.33 E-value=4e-11 Score=110.98 Aligned_cols=128 Identities=8% Similarity=0.012 Sum_probs=104.8
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH---hhHHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS---QSVIMFCAG 166 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~ 166 (333)
...|.+.+. ..|.++.+.+++.....++..++.++.|++.||+|||+++.++.++.++..++..+. .+.+.+.+.
T Consensus 282 ~~~~~~~~~--~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (471)
T PRK10504 282 FMTPVFLQI--GLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFV 359 (471)
T ss_pred HHHHHHHHH--HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHH
Confidence 345666553 278888899999988899999999999999999999999998888888776666553 233444556
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.++.|++.+..++....++.+..|++.||.+.++.+....+|..+++.+.+.+
T Consensus 360 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~l 412 (471)
T PRK10504 360 LFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLL 412 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788888888888888999999999999999999999999999998887765
No 142
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.32 E-value=7.9e-11 Score=107.52 Aligned_cols=127 Identities=17% Similarity=0.114 Sum_probs=95.7
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ--SVIMFCAGR 167 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 167 (333)
..+|.+.++ .|.+..+.+.+.+...++..++.++.|++.||+|||+.+..+.++.++..+.....+ +...+.+..
T Consensus 252 ~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (426)
T PRK12307 252 GLLPTYLAG---EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACL 328 (426)
T ss_pred HHHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 346777777 788888889999999999999999999999999999999888877766655544332 222222222
Q ss_pred HHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 168 LLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 168 ~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+..+++..+..+..+.++.|.+|++.||++.|+......+|..++|.+.+++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l 380 (426)
T PRK12307 329 FGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWL 380 (426)
T ss_pred HHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence 2222222333455667889999999999999998888889999999998877
No 143
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.32 E-value=5.7e-11 Score=110.04 Aligned_cols=145 Identities=12% Similarity=0.091 Sum_probs=123.7
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLL 169 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (333)
..+|.+.++ .+|.+....|++.+.+.+|.++|+++.+++.+|+++++.+..+.++.+++.+..++.++.+..+++.++
T Consensus 239 aLlPl~a~~--~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l 316 (524)
T PF05977_consen 239 ALLPLFARD--VLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFL 316 (524)
T ss_pred HhhhHHHHH--HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 446777755 488899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHH
Q psy15539 170 TGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFV 236 (333)
Q Consensus 170 ~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 236 (333)
.|++.........+.+.+..|++.||+.++++++....+..+|..+.+.+ +.+..+.+.++..++..
T Consensus 317 ~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 317 AGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 99999988888899999999999999999998887777777777776665 55666666655544433
No 144
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.32 E-value=2.9e-11 Score=107.70 Aligned_cols=127 Identities=13% Similarity=0.021 Sum_probs=111.6
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQS-VIMFCAGRLL 169 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 169 (333)
..|.+.++ .+|.+..+.+++.+...++..++.++.+++.||+|||+.+..+.++.+++.++..+.++ .+.+++..++
T Consensus 233 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (365)
T TIGR00900 233 LFPYVQSK--YLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFA 310 (365)
T ss_pred HhHHHHHH--HhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHH
Confidence 35666553 26888889999999999999999999999999999999999888888888777777664 7788888999
Q ss_pred HhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 170 TGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 170 ~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.|++.+...+...+++.|.+|++.|+++.++.+....+|..+++.+.+++
T Consensus 311 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 311 IGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888765
No 145
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.30 E-value=1.5e-10 Score=104.25 Aligned_cols=139 Identities=14% Similarity=0.119 Sum_probs=112.7
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLT 170 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 170 (333)
..|.+.++ .|.+..+.+.+.+...++..+..++.|++.||+|+|+.+.++.++.+++.++..+.++.+.+++..++.
T Consensus 227 ~~~~~~~~---~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (382)
T PRK11128 227 FSAIYWQA---AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILH 303 (382)
T ss_pred HHHHHHHH---CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 34556666 888988899999999999999999999999999999999999999888888888888989889999999
Q ss_pred hhhhhhhhhhhhhhhcccCCCcchhhHHHHHH-HHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q psy15539 171 GFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQ-LQCTAGILFVYAVGSWA----SVYGLSIICALLPIF 234 (333)
Q Consensus 171 G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~-~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~ 234 (333)
|++.+...+....++.+. +++++++..+.++ ....+|..++|.+++.+ ++ ..++..+++.++
T Consensus 304 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~ 370 (382)
T PRK11128 304 CGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALP 370 (382)
T ss_pred HHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHH
Confidence 999998888888888887 5556788888765 55677778888888877 44 344444444443
No 146
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.30 E-value=2.4e-11 Score=112.41 Aligned_cols=149 Identities=11% Similarity=-0.022 Sum_probs=104.4
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhH-------HHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKN-------TMLLLAVPTLVGWGLIIWSQSVIMFC 164 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~-------~l~~~~~~~~~~~~~~~~~~~~~~~~ 164 (333)
+|.+..+ .+|.+..+.+.+.++..++..++.+++|+++||+|||+ .+.+..++.++..++.....+....+
T Consensus 275 ~p~~l~~--~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 352 (476)
T PLN00028 275 IAEYFYD--RFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAI 352 (476)
T ss_pred HHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 5555443 27999999999999999999999999999999998762 22233333333334444444555555
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHhhc
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA---SVYGLSIICALLPIFFVGLMLL 241 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 241 (333)
+.-++.+++.+...+...+++.+.. ++.||...|+.+.+..+|+.+++.+...- +|+..|++.+++.++..++.++
T Consensus 353 ~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 353 VVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAF 431 (476)
T ss_pred HHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHh
Confidence 5556666666656666666667765 47899999998888888888887765421 5888888888777776666665
Q ss_pred cc
Q psy15539 242 MP 243 (333)
Q Consensus 242 ~~ 243 (333)
++
T Consensus 432 ~~ 433 (476)
T PLN00028 432 IH 433 (476)
T ss_pred ee
Confidence 54
No 147
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.29 E-value=1.2e-10 Score=105.45 Aligned_cols=135 Identities=12% Similarity=0.127 Sum_probs=111.9
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhh
Q psy15539 103 LVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVP 182 (333)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~ 182 (333)
+.+....+.+.++..+...++.+..|++.||+|||+.+.++.++.++..++....++.+.+++..++.|++.+.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556778888888899999999999999999999999999988888877777788888888889999998877766677
Q ss_pred hhhcccCCCcchhhHHHH-HHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHH
Q psy15539 183 MYTAEIAETEIRGTLGTY-FQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVG 237 (333)
Q Consensus 183 ~~~~e~~~~~~rg~~~~~-~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 237 (333)
.+..+..+++.+++..+. ++....+|..+++.+++++ ||+..|.+.+++.++..+
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 778888888888887766 6778888999998888777 778888887777665443
No 148
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.29 E-value=9.4e-11 Score=107.33 Aligned_cols=151 Identities=19% Similarity=0.140 Sum_probs=100.8
Q ss_pred chhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhcc--chh-HHHHHHHHHHHHHHHHHH--HHhhHHH
Q psy15539 88 TSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTV--GRK-NTMLLLAVPTLVGWGLII--WSQSVIM 162 (333)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--Grr-~~l~~~~~~~~~~~~~~~--~~~~~~~ 162 (333)
....+|.+..+ +.|.+..+.+...+.+.++..++.++.|+++||+ ++| .......+...+..+... ...+...
T Consensus 262 ~~~~~p~~l~~--~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (434)
T PRK11663 262 INDWGNLYMSE--TLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVM 339 (434)
T ss_pred HHHHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHH
Confidence 33456777743 2799999999999999999999999999999999 333 322221111111111111 1223333
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH
Q psy15539 163 FCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGL 238 (333)
Q Consensus 163 ~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 238 (333)
..+..++.|++..+........+.|.+|++.|++++|+.+....+|..++|.+.+++ +|...+++.++++++..+.
T Consensus 340 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~ 419 (434)
T PRK11663 340 QAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALL 419 (434)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 334444455443322333445678999999999999999999999999999888776 7888888888877665544
Q ss_pred hh
Q psy15539 239 ML 240 (333)
Q Consensus 239 ~~ 240 (333)
.+
T Consensus 420 ~~ 421 (434)
T PRK11663 420 LL 421 (434)
T ss_pred HH
Confidence 43
No 149
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.28 E-value=1.4e-10 Score=106.24 Aligned_cols=115 Identities=16% Similarity=0.201 Sum_probs=96.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHhhhhhhhhhhhhh
Q psy15539 105 TESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS-QSVIMFCAGRLLTGFGGGSFAVVVPM 183 (333)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~ 183 (333)
+....+++.++..++.+++.+++++++||+|+|+.+.++.++.+++.++..+. .+.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567777888899999999999999999999999999988888887776664 35566677788899999988899999
Q ss_pred hhcccCC-------CcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 184 YTAEIAE-------TEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 184 ~~~e~~~-------~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+++|..+ ++.+|...++.+....+|..+++.+.+++
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988865 55679999999999999999988887765
No 150
>PRK15075 citrate-proton symporter; Provisional
Probab=99.27 E-value=3e-10 Score=104.02 Aligned_cols=130 Identities=17% Similarity=0.208 Sum_probs=92.6
Q ss_pred chhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH-HHH---HhhHHHH
Q psy15539 88 TSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGL-IIW---SQSVIMF 163 (333)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~-~~~---~~~~~~~ 163 (333)
.....|.+.++ ..|.+..+.+++...+.++..++.++.|+++||+|||+.++.+.++..+..+. ... .++....
T Consensus 257 ~~~~~p~~l~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (434)
T PRK15075 257 ITVYTPTFGKT--VLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARM 334 (434)
T ss_pred HHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHH
Confidence 34446777654 26888888888888899999999999999999999999988765544332221 111 2233334
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHH-HHHHHHHHHHHHHHhHHH
Q psy15539 164 CAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYF-QLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 164 ~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~-~~~~~~g~~~~~~~~~~~ 219 (333)
.+..++.|++.+...+....++.|.+|++.|+++.++. +.+..+++.++|.+.+++
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 335 LAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHH
Confidence 44455566666666666778899999999999999984 555555566778777665
No 151
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.25 E-value=3.6e-11 Score=109.91 Aligned_cols=150 Identities=12% Similarity=0.127 Sum_probs=111.9
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhh----ccchhHHHH-HHHHHHHHHHHHHHHH-h-------
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVD----TVGRKNTML-LLAVPTLVGWGLIIWS-Q------- 158 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----r~Grr~~l~-~~~~~~~~~~~~~~~~-~------- 158 (333)
.+.+.+. .|+++...+.+..+.-+..++..|+.|.++| |+||||..+ +|.+..+++.+++... +
T Consensus 25 ~~f~~~~---~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 25 LYFYTDV---LGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHH---cCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhh
Confidence 3445555 8999999999999999999999999999999 899876655 6778888887777755 3
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCC-CcchhhHHHHHHHHHHHHHHHHHHHhHHH-----------HHHHHHH
Q psy15539 159 SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAE-TEIRGTLGTYFQLQCTAGILFVYAVGSWA-----------SVYGLSI 226 (333)
Q Consensus 159 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~~ 226 (333)
....+.+..++..++.........++..|+.+ +++|.+..+.-..+..+|.++...+...+ +|++..+
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 22345666677788888888888999999987 57899999988777777776444443322 4777777
Q ss_pred HHHHHHHHHHH-HhhcccC
Q psy15539 227 ICALLPIFFVG-LMLLMPE 244 (333)
Q Consensus 227 ~~~~~~~~~~~-~~~~~~e 244 (333)
+.+++.++..+ ..+..+|
T Consensus 182 v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHhhhhhheeee
Confidence 77777666443 3445565
No 152
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.24 E-value=3.7e-10 Score=104.83 Aligned_cols=143 Identities=10% Similarity=0.134 Sum_probs=107.3
Q ss_pred cccCchhHHHHHH-HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH---HHH-hhHHHHHHHHHHHhhhhhh
Q psy15539 102 FLVTESDLSFIGS-SMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLI---IWS-QSVIMFCAGRLLTGFGGGS 176 (333)
Q Consensus 102 ~~~~~~~~~~~~~-~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~l~G~~~g~ 176 (333)
.|.+..+.+++.. ...++.+++.++.|+++||+|+|+.+.++.++.+++.++. ... ++...+.+..++..++.|.
T Consensus 253 ~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~ 332 (491)
T PRK11010 253 VGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGM 332 (491)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 8999999999874 5568999999999999999999998877666555544332 222 3444444455665555555
Q ss_pred hhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhhcccC
Q psy15539 177 FAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLMLLMPE 244 (333)
Q Consensus 177 ~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~e 244 (333)
..+...++..+..+++.+++..++.+....+|..+++.+.+++ ||+..|.+.++++++.++...++++
T Consensus 333 ~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 333 GTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5566778888999999999999999988899988777777766 7888888888888776666655544
No 153
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.24 E-value=4.7e-10 Score=97.81 Aligned_cols=138 Identities=7% Similarity=-0.077 Sum_probs=103.6
Q ss_pred cchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q psy15539 87 WTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAG 166 (333)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (333)
.+...++.|.++...+|.++.+.++..+.+..+..+|.++.+++.||+|+|+.+.++.++.+++.++....++... ..+
T Consensus 158 ~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~ 236 (310)
T TIGR01272 158 SAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWF 236 (310)
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHH
Confidence 3344456676542236899999999999999999999999999999999999988888887777766555444332 345
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHH
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSII 227 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~ 227 (333)
.++.|++.+..+|...+...+..|++ .+++.++. ....+|..+.|.+.+.+ +.+..+++
T Consensus 237 ~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 237 VLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFAL 299 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHH
Confidence 66889999999999999988888754 45666665 45568888888876665 44555543
No 154
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.23 E-value=2.2e-10 Score=105.99 Aligned_cols=159 Identities=11% Similarity=0.053 Sum_probs=105.9
Q ss_pred hccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhh----ccch-hHHHHHHHHHHHHHHHHHHHHh-
Q psy15539 85 LGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVD----TVGR-KNTMLLLAVPTLVGWGLIIWSQ- 158 (333)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~- 158 (333)
...+...++.|..+ ..|++...+|.+..+.-+.-++..|+.|+++| |+|| |+.++++.+..+++.+++...+
T Consensus 22 ~~~~~~~l~~yyt~--v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~ 99 (473)
T PRK10429 22 IGIVYMYLMYYYTD--VVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHL 99 (473)
T ss_pred HHHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCC
Confidence 33344444444444 27999999999999999999999999999999 6699 5556667777777766664432
Q ss_pred -----hHHHHHHHHHHHhhhhhhhhhhhhhhhcccC-CCcchhhHHHHHHHHHHHHHHHHHHHhHH----H-------HH
Q psy15539 159 -----SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIA-ETEIRGTLGTYFQLQCTAGILFVYAVGSW----A-------SV 221 (333)
Q Consensus 159 -----~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~-~~~~rg~~~~~~~~~~~~g~~~~~~~~~~----~-------~~ 221 (333)
.+..+++..++.+++.........++..|+. ++++|.+..++-..+..+|..+.+.+... . +|
T Consensus 100 ~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~ 179 (473)
T PRK10429 100 FEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGF 179 (473)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhH
Confidence 1334555566677777777788888999998 68999998888555555554444333221 1 45
Q ss_pred HHHHHHHHHHHHHHH-HHhhcccCC
Q psy15539 222 YGLSIICALLPIFFV-GLMLLMPES 245 (333)
Q Consensus 222 ~~~~~~~~~~~~~~~-~~~~~~~e~ 245 (333)
+...++.+++.++.. +.++..+|.
T Consensus 180 ~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 180 QMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCceec
Confidence 555555555554433 333345553
No 155
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.23 E-value=8.2e-10 Score=95.04 Aligned_cols=143 Identities=16% Similarity=0.097 Sum_probs=102.1
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVV 181 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~ 181 (333)
+|++..+++.+....+...++.+++.|.++||+|||+.-++.+++.+++++. -..+++..++++|++.|++....+...
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaTSLLfS~F 142 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIATSLLFSAF 142 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999988888888888864 445789999999999999999988888
Q ss_pred hhhh-ccc----CCCcchhhHHHHHH-HHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHHHHHHHhh-cccCC
Q psy15539 182 PMYT-AEI----AETEIRGTLGTYFQ-LQCTAGILFVYAVGSWA------SVYGLSIICALLPIFFVGLML-LMPES 245 (333)
Q Consensus 182 ~~~~-~e~----~~~~~rg~~~~~~~-~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~e~ 245 (333)
-+++ .|. +|++..+...+... ...++-.+.+.+++.++ +...+|....++.++..+.+. .-+|.
T Consensus 143 EsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 143 ESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 7775 444 34444444443322 23333333444444443 235677776666665544433 33443
No 156
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.22 E-value=3.8e-10 Score=104.06 Aligned_cols=169 Identities=17% Similarity=0.086 Sum_probs=116.9
Q ss_pred HHHHHHHhhhhhhhccchhhh-hhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccc-----hhHHHHHHHH
Q psy15539 72 LTATIGGFIMGTILGWTSPAG-DRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVG-----RKNTMLLLAV 145 (333)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~~~~ 145 (333)
.++...++..|.. +.....+ |.+.++ +|+++++.+.+.+...+...+-.+ +|+++||++ ||+.++++.+
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~~---lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLTDD---LGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHH
Confidence 3444445566665 4444444 444445 899999999999999999988555 999999998 7777777776
Q ss_pred HHH-HHHHHHHHHhhHH-HHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHH---HHHHHHHHHHHHhHHH-
Q psy15539 146 PTL-VGWGLIIWSQSVI-MFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQL---QCTAGILFVYAVGSWA- 219 (333)
Q Consensus 146 ~~~-~~~~~~~~~~~~~-~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~---~~~~g~~~~~~~~~~~- 219 (333)
+.+ +....++..++.. ...++.++.+++.+......-++..|..+ ++++...+.... ...+|.++++.+++.+
T Consensus 104 l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 104 LGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 663 3333333334433 34447889999999999999999999998 555443333322 2336777776666655
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhhcccCCh
Q psy15539 220 ---SVYGLSIICALLPIFFVGLMLLMPESP 246 (333)
Q Consensus 220 ---~~~~~~~~~~~~~~~~~~~~~~~~e~~ 246 (333)
+|+..+++.+++.++..+..++++|++
T Consensus 183 ~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~ 212 (468)
T TIGR00788 183 DKTLTRILFLITAALLLLQLFVSNLSKERR 212 (468)
T ss_pred HhcCcchHHHHHHHHHHHHHHHHHhccccc
Confidence 799999888887777665666778763
No 157
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.21 E-value=5.6e-10 Score=100.77 Aligned_cols=143 Identities=13% Similarity=0.009 Sum_probs=105.0
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHH-HHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH------HhhHHHHH
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMA-LGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW------SQSVIMFC 164 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~~~ 164 (333)
.+.+.++ .|+++++.+++..... .+..++.++.|++.||+|+|+.+.++.++.++..+.... ..+...++
T Consensus 231 ~~~~l~~---~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
T TIGR02718 231 SKLYLVD---AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAW 307 (390)
T ss_pred hhHHHHh---cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHH
Confidence 4566777 8999999999888775 466778899999999999999988877665333332221 12233334
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCC-cchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHH
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAET-EIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVG 237 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~-~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 237 (333)
....+.+++.+...+...+.+.+..++ +.+++..++.+....+|..++|.+++++ +++..|++.+++.++.++
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 445556666777777777777777765 8899999999999999999999998876 667777776666555443
No 158
>KOG2563|consensus
Probab=99.20 E-value=2.2e-09 Score=94.39 Aligned_cols=154 Identities=11% Similarity=0.029 Sum_probs=115.0
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q psy15539 62 AKRITQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTML 141 (333)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~ 141 (333)
+...+||..++...+.++..++..-.+++.......- +| +....-|+..+|++.+....+++-|+.||+|-|....
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~---Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~l 113 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSF---YG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALL 113 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHH---hc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHH
Confidence 3445677777777777776654333333333333332 56 6678889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh------hHH--HHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHH
Q psy15539 142 LLAVPTLVGWGLIIWSQ------SVI--MFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVY 213 (333)
Q Consensus 142 ~~~~~~~~~~~~~~~~~------~~~--~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~ 213 (333)
++..+.+++..+-..+. .++ ....+..+.++++-.......-...-|||+++|..+..+-.++..+|.+++.
T Consensus 114 lgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ 193 (480)
T KOG2563|consen 114 LGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGF 193 (480)
T ss_pred HHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHh
Confidence 99999999988876642 233 5556777777777666655556667789999999999888877777777777
Q ss_pred HHhHHH
Q psy15539 214 AVGSWA 219 (333)
Q Consensus 214 ~~~~~~ 219 (333)
++...+
T Consensus 194 llppil 199 (480)
T KOG2563|consen 194 LLPPIL 199 (480)
T ss_pred hcccee
Confidence 775544
No 159
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.19 E-value=1.7e-10 Score=103.19 Aligned_cols=128 Identities=13% Similarity=0.107 Sum_probs=91.0
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccch-hHHHH-HHHHH-HHHHHHHHHH--HhhHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGR-KNTML-LLAVP-TLVGWGLIIW--SQSVIMFC 164 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-r~~l~-~~~~~-~~~~~~~~~~--~~~~~~~~ 164 (333)
...|.+..+ .+|.+..+.+++.+...++..++.++.|++.||.++ |+... ..... ..++...... ..+....+
T Consensus 237 ~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (379)
T TIGR00881 237 DWSPLYLTQ--EKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDL 314 (379)
T ss_pred HHHHHHHHH--HhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHH
Confidence 345556544 278888999999999999999999999999998643 33222 22211 1222222222 23445555
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
++.++.|+...+..+....+..|.+|++.|+++.++.+....+|..++|.+.+.+
T Consensus 315 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 369 (379)
T TIGR00881 315 ICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYL 369 (379)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHH
Confidence 6667777766556666677889999999999999999999999999999888776
No 160
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.19 E-value=4.5e-10 Score=115.02 Aligned_cols=127 Identities=17% Similarity=0.116 Sum_probs=110.1
Q ss_pred hhhhhhcCCcccccCch-hHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTES-DLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLL 169 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (333)
.+|.+..+ .+|.+.. ..+++.+...++.+++.+++|+++||+++++.+.++.++.+++.++..+..+.+.++++.++
T Consensus 254 ~~~~~~~~--~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (1146)
T PRK08633 254 NFPAYAKE--VLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFL 331 (1146)
T ss_pred hhHHHHHH--HhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 34555443 2788888 89999999999999999999999999999999998888888888888888888888888999
Q ss_pred HhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 170 TGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 170 ~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.|++.+...+...+++.+..|++.||+++++.+....+|.++++.++..+
T Consensus 332 ~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 332 FGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLF 381 (1146)
T ss_pred HHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888999999999999999999999988888887777776655
No 161
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.19 E-value=8.1e-10 Score=99.34 Aligned_cols=161 Identities=16% Similarity=0.190 Sum_probs=105.4
Q ss_pred hhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccc-hhHHHHHHHHHHHHHHHHHHHHhhHH
Q psy15539 83 TILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVG-RKNTMLLLAVPTLVGWGLIIWSQSVI 161 (333)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~~~~~ 161 (333)
...+...+.++.+.++ .|+|..++|.+.+...+..+++.+++|.++||.+ +|+.+.+..++.++.........+++
T Consensus 16 ~~~G~~~p~~~~~L~~---~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~ 92 (400)
T PF03825_consen 16 FAYGAFLPYLPLYLES---RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFW 92 (400)
T ss_pred HHHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3444556778889998 9999999999999999999999999999999986 56777777777777666666777888
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcccCCCc--chhhHHHHHHHHHHHHHHH-HHHHhHHHH---HHHHHHHHHHHHHHH
Q psy15539 162 MFCAGRLLTGFGGGSFAVVVPMYTAEIAETE--IRGTLGTYFQLQCTAGILF-VYAVGSWAS---VYGLSIICALLPIFF 235 (333)
Q Consensus 162 ~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~--~rg~~~~~~~~~~~~g~~~-~~~~~~~~~---~~~~~~~~~~~~~~~ 235 (333)
.+++.-++..+......|...++..+....+ +-|+.=.+-..++.++... +..+.+..+ ....+++.+...++.
T Consensus 93 ~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll 172 (400)
T PF03825_consen 93 WLFVIMLLFSFFFSPTMPLSDSIALSYLGDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLL 172 (400)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHcccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHH
Confidence 8887777778777777777777776665421 1122222222333333221 122222222 223444555444444
Q ss_pred HHHhhcccCCh
Q psy15539 236 VGLMLLMPESP 246 (333)
Q Consensus 236 ~~~~~~~~e~~ 246 (333)
....+.+|+.|
T Consensus 173 ~~~~l~lp~~~ 183 (400)
T PF03825_consen 173 AGFALFLPKTP 183 (400)
T ss_pred HHHHHhCCCCc
Confidence 44455677765
No 162
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.18 E-value=1.8e-09 Score=94.98 Aligned_cols=150 Identities=15% Similarity=0.104 Sum_probs=117.6
Q ss_pred ccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH-hhHHHHH
Q psy15539 86 GWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS-QSVIMFC 164 (333)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~ 164 (333)
..+.++-|.+.+. .|.+.+..+++..++.++..+|..+.|+++|| +.|+.+....++.++..+.+.+. .+.+..+
T Consensus 229 ~~ftYi~P~L~~v---~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~ 304 (394)
T COG2814 229 ALYTYIRPFLESV---AGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALAL 304 (394)
T ss_pred hhHHhHHHHHHHc---cCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 3444455666666 89999999999999999999999999999999 99999988888877777766654 4555666
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhh
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLML 240 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 240 (333)
+.-++.|+..+.........+++ .-++.+..+.+++...+.+|..+|..+++.. ++....++.+++.++.++..+
T Consensus 305 ~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~ 383 (394)
T COG2814 305 ALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLAL 383 (394)
T ss_pred HHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Confidence 66777888877766666666777 4467788999998888888888888887776 777888888877777655544
No 163
>KOG2504|consensus
Probab=99.18 E-value=2.2e-10 Score=105.74 Aligned_cols=156 Identities=16% Similarity=0.184 Sum_probs=137.3
Q ss_pred hccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccc--hhHHHHHHHHHHHHHHHHHHHHhhHHH
Q psy15539 85 LGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVG--RKNTMLLLAVPTLVGWGLIIWSQSVIM 162 (333)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (333)
.......+|.+.++ .+.+..+...+.++..+...++.++.|+++|+.. ++.+..++.++.+++.+.+.+..+++.
T Consensus 314 ~~~p~~~l~~~~~~---~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~ 390 (509)
T KOG2504|consen 314 FNVPFVYLPSYAKS---LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVG 390 (509)
T ss_pred HHHHHHHHHHHHhh---cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 33444557888887 9999999999999999999999999999999988 455666788888888888999999999
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHH
Q psy15539 163 FCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVYGLSIICALLPIFFVG 237 (333)
Q Consensus 163 ~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 237 (333)
++..-.+.|++.|.........+.|+.+.++-..+.|+.....+++.+++|++++++ +|...|+.+++..++...
T Consensus 391 l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~ 470 (509)
T KOG2504|consen 391 LIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAV 470 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHH
Confidence 999999999999998888888999999999999999999999999999999999877 588899999988888776
Q ss_pred Hhhccc
Q psy15539 238 LMLLMP 243 (333)
Q Consensus 238 ~~~~~~ 243 (333)
.++..+
T Consensus 471 ~~~~~~ 476 (509)
T KOG2504|consen 471 LLLILR 476 (509)
T ss_pred HHHHhH
Confidence 666655
No 164
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.18 E-value=2.1e-10 Score=100.07 Aligned_cols=167 Identities=14% Similarity=0.101 Sum_probs=122.8
Q ss_pred HHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhcc--chhHHHHHHHHHH
Q psy15539 70 AALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTV--GRKNTMLLLAVPT 147 (333)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--Grr~~l~~~~~~~ 147 (333)
.++.+++.++........+..-.|.|+.+ ..|.+..++++..+.+-++.+.|.+++|+++||+ |||....+.+.+.
T Consensus 253 ~iW~la~a~vfvYivR~gi~dW~p~YL~e--~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~ 330 (448)
T COG2271 253 LIWLLALANVFVYVVRYGINDWGPLYLSE--VKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLL 330 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHH--hcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 44555566655555555555567777776 4788999999999999999999999999999985 6777666544444
Q ss_pred H-HHHHHHHHHh--hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHH-HHHHHHHHhHHH----
Q psy15539 148 L-VGWGLIIWSQ--SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTA-GILFVYAVGSWA---- 219 (333)
Q Consensus 148 ~-~~~~~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~~---- 219 (333)
. ++.+....++ |+....++.++.|+..-+..-+......|..|++--|++.|+.+.+.-+ |...+....+++
T Consensus 331 i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~ 410 (448)
T COG2271 331 ITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW 410 (448)
T ss_pred HHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecC
Confidence 3 3334444444 4577888888999877766667777788999999999999998776666 777766665555
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy15539 220 SVYGLSIICALLPIFFVGL 238 (333)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~ 238 (333)
+|...|++..+.+++..+.
T Consensus 411 gW~g~Fi~~~~~a~l~~ll 429 (448)
T COG2271 411 GWDGGFIVLSIAALLAILL 429 (448)
T ss_pred CCcchHHHHHHHHHHHHHH
Confidence 8888887776666654433
No 165
>PRK09848 glucuronide transporter; Provisional
Probab=99.17 E-value=1.2e-09 Score=100.38 Aligned_cols=126 Identities=20% Similarity=0.231 Sum_probs=97.4
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHH
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ--SVIMFCAGRLL 169 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 169 (333)
.|.+.++ .+|.+....++......++.+++.++.+++.||+|+|+.+.++.++.+++.++..+.+ +.+.+++..++
T Consensus 251 ~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l 328 (448)
T PRK09848 251 SLFYVRY--VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAI 328 (448)
T ss_pred heeeEee--ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHH
Confidence 4545444 2565555445544545677888999999999999999999999988888877776643 56666777888
Q ss_pred HhhhhhhhhhhhhhhhcccCCCc-------chhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 170 TGFGGGSFAVVVPMYTAEIAETE-------IRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 170 ~G~~~g~~~~~~~~~~~e~~~~~-------~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.|+|.+...+...+..+|..|.+ .+|...++.+....+|..+++.+.+.+
T Consensus 329 ~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~ 385 (448)
T PRK09848 329 ASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFI 385 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888654 458889999999999999888876554
No 166
>KOG0253|consensus
Probab=99.17 E-value=4.6e-10 Score=95.96 Aligned_cols=129 Identities=19% Similarity=0.094 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcch
Q psy15539 115 SMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIR 194 (333)
Q Consensus 115 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~r 194 (333)
+..+..+-|.++.+++.||+|||+.+....++++++.++...+.+-....+.-+..-++..+.+...+.|..|.+|++.|
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavR 468 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVR 468 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhh
Confidence 34556778999999999999999999999999999999988876544444444444444455667788899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHH--HHHHHHHHHHHHHHHHHHHhhccc
Q psy15539 195 GTLGTYFQLQCTAGILFVYAVGSWA--SVYGLSIICALLPIFFVGLMLLMP 243 (333)
Q Consensus 195 g~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 243 (333)
+++.|.......+|+++.|.++-.. .-..+..+.+.+++++.++..++|
T Consensus 469 atgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffP 519 (528)
T KOG0253|consen 469 ATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFP 519 (528)
T ss_pred hcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeee
Confidence 9999999999999999999998333 233445555666666655666665
No 167
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.16 E-value=1.2e-09 Score=90.86 Aligned_cols=146 Identities=18% Similarity=0.177 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy15539 68 YMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPT 147 (333)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 147 (333)
|.......+.....| ..+.++.+-|.+.+. +|+|.++...+.+.-.+|..+ +++.|.+.|++|.+.++.+|.+..
T Consensus 2 W~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~---l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~ 76 (250)
T PF06813_consen 2 WLSLVASIWVQLCSG-TTYTFSAYSPQLKSR---LGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLG 76 (250)
T ss_pred hhhHHHHHHHHHhcC-cccchhhhhHHHHHH---hCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHH
Confidence 333333333333333 344555667888887 999999999999999999886 588899999999999999999999
Q ss_pred HHHHHHHHHH-------hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 148 LVGWGLIIWS-------QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 148 ~~~~~~~~~~-------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.++..+...+ .+.+.+.+..++.|.+.+...+.......+.|| +.||++.|+.-...++++.+-..+...+
T Consensus 77 ~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 77 FVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred HHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHH
Confidence 9998877653 356777777888888776666666666667887 5899999999999999888776665554
No 168
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.16 E-value=1.1e-09 Score=99.47 Aligned_cols=125 Identities=12% Similarity=0.095 Sum_probs=99.3
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH-----hhHHHHHHH
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS-----QSVIMFCAG 166 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 166 (333)
.|.+..+ .+|.++.+.++......++..++.++.|+++||+|+|+.+.++.++.+++.++..+. .+...+++.
T Consensus 238 ~p~~~~~--~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (406)
T PRK15402 238 SPVILIS--GEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAG 315 (406)
T ss_pred hHHHHHH--HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 4555433 278888888888888888999999999999999999999998888877777766553 245666777
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.++.|++.+...+........ .++++||+..+..+....+|..+++.+++++
T Consensus 316 ~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l 367 (406)
T PRK15402 316 LSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHA 367 (406)
T ss_pred HHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888999888777666555543 3458999999999999999999999988877
No 169
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.16 E-value=4.3e-10 Score=98.16 Aligned_cols=144 Identities=17% Similarity=0.175 Sum_probs=127.7
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVV 181 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~ 181 (333)
+|++..+..++.....+..++|+++.|+|.||+|.|+++.++.+++.+.++...+......+.++..+.|...|+.++..
T Consensus 283 ~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~S 362 (438)
T COG2270 283 LGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASS 362 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHH
Confidence 99999999999999999999999999999999999999999999999998888887777788888999999999999999
Q ss_pred hhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHhhcccCC
Q psy15539 182 PMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVYGLSIICALLPIFFVGLMLLMPES 245 (333)
Q Consensus 182 ~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~e~ 245 (333)
-++.++..|+++-+...|++++....++.++|.+-+.+ .-|..+....++.++.++..++.|+.
T Consensus 363 RSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 363 RSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 99999999999999999999999999999999997776 45566666566666666666666654
No 170
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.15 E-value=4.5e-10 Score=104.27 Aligned_cols=128 Identities=12% Similarity=0.095 Sum_probs=108.0
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH----HhhHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW----SQSVIMFCA 165 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~~~~ 165 (333)
..+|.+.++ .+|.++.+.+++.....++..++.++.|++.||+|||+.+.++.++.+++..+..+ ..+.+.+..
T Consensus 276 ~~~p~~~~~--~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (485)
T TIGR00711 276 YLLPLYLQQ--VLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIAL 353 (485)
T ss_pred HHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHH
Confidence 346666654 37889999999999999999999999999999999999999998888888877663 124566667
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 166 GRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 166 ~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
..++.|++.+...+.......+..|+++||++.++.+....+|..+++.+.+.+
T Consensus 354 ~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~ 407 (485)
T TIGR00711 354 PQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTI 407 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788899999888777777778889999999999999999999999999887766
No 171
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.15 E-value=4e-10 Score=103.36 Aligned_cols=154 Identities=12% Similarity=0.022 Sum_probs=96.3
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH---HHHHHHHHH--hhHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTL---VGWGLIIWS--QSVIMFC 164 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~~~~--~~~~~~~ 164 (333)
...|.+.++ ..|.+..+.++....+.++..++.++.|+++||+|+++....+..+.. ++.+.+... .+.+...
T Consensus 272 ~~~p~~l~~--~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T TIGR00712 272 DWSPTYLKE--VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDM 349 (438)
T ss_pred HhHHHHHHH--ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHH
Confidence 346667665 268888889999999999999999999999999975432222322221 111211121 2333333
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHH-HHHHHHHhHHH----HHHHHHHHHHHHHHHH-HHH
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAG-ILFVYAVGSWA----SVYGLSIICALLPIFF-VGL 238 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g-~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~ 238 (333)
+..++.|++..+..........|.+|++.||++.|+.+....+| ..++|.+.+++ +|...+++.++..++. +..
T Consensus 350 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 429 (438)
T TIGR00712 350 ICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL 429 (438)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 34444554432222222345679999999999999987766665 46777777665 6777777766655554 334
Q ss_pred hhcccCC
Q psy15539 239 MLLMPES 245 (333)
Q Consensus 239 ~~~~~e~ 245 (333)
.+++||.
T Consensus 430 ~~~~~~~ 436 (438)
T TIGR00712 430 IVVMIGE 436 (438)
T ss_pred HHHHhhc
Confidence 4455654
No 172
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.14 E-value=3.8e-10 Score=100.54 Aligned_cols=114 Identities=12% Similarity=0.246 Sum_probs=94.3
Q ss_pred hhhhhhhhcCCcccccCchhHHHHHHHHH-HHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH----------
Q psy15539 89 SPAGDRLIAGEYPFLVTESDLSFIGSSMA-LGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS---------- 157 (333)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------- 157 (333)
....|.+.++ .|.+..+.+.+..+.. ++..++.+++|++.||+|||+.+.++.++.+++..+..+.
T Consensus 229 ~~~~~~~l~~---~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (356)
T TIGR00901 229 TVLTTLFLLD---MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGIT 305 (356)
T ss_pred HHHHHHHHHH---cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc
Confidence 3446777776 8899999988887665 6788999999999999999999998888887776655543
Q ss_pred -hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHH
Q psy15539 158 -QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQC 205 (333)
Q Consensus 158 -~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~ 205 (333)
++.+.+..+.++.+++.+...+...+++.|.+|+++||+..++.+...
T Consensus 306 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 306 FPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 345667777889999999999999999999999999999999877654
No 173
>PRK11462 putative transporter; Provisional
Probab=99.13 E-value=2.6e-09 Score=98.44 Aligned_cols=135 Identities=14% Similarity=0.059 Sum_probs=100.5
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhc----cchhHHH-HHHHHHHHHHHHHHHHHhh------HHHHHHHHHHH
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDT----VGRKNTM-LLLAVPTLVGWGLIIWSQS------VIMFCAGRLLT 170 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr~~l-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~ 170 (333)
.|+++..+|.+..+.-+.-++..|+.|.++|| +||||.. +++.+..+++.+++...++ ...+.+.-++.
T Consensus 40 ~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~ 119 (460)
T PRK11462 40 FGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLL 119 (460)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 89999999999999999999999999999995 7887554 4577777777776655442 34455556667
Q ss_pred hhhhhhhhhhhhhhhcccCC-CcchhhHHHHHHHHHHHHHHHHHHHhHHH-----------HHHHHHHHHHHHHHHHH
Q psy15539 171 GFGGGSFAVVVPMYTAEIAE-TEIRGTLGTYFQLQCTAGILFVYAVGSWA-----------SVYGLSIICALLPIFFV 236 (333)
Q Consensus 171 G~~~g~~~~~~~~~~~e~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 236 (333)
.++.........++..|..+ +++|.+..++...+..+|..+++.+...+ +|+....+.++++++..
T Consensus 120 ~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 120 TLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred HHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 78888788888888999876 88999999998888887776665553221 45655555555554433
No 174
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.13 E-value=1.4e-09 Score=100.64 Aligned_cols=153 Identities=15% Similarity=0.011 Sum_probs=100.7
Q ss_pred cchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHH--------HHHHHHH--HHHHHHHHH
Q psy15539 87 WTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTM--------LLLAVPT--LVGWGLIIW 156 (333)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l--------~~~~~~~--~~~~~~~~~ 156 (333)
.....+|.+..+ .+|.+..+.+++.++..++..++.++.|+++||+++|+.. ..+.... ++..+....
T Consensus 279 ~~~~~lp~~l~~--~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (465)
T TIGR00894 279 ILPTYLPTFISW--VLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPY 356 (465)
T ss_pred HHHHHHHHHHHH--HhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333456777654 3788999999999999999999999999999998765321 1111111 111111112
Q ss_pred -HhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-------HHHHHHHHH
Q psy15539 157 -SQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-------SVYGLSIIC 228 (333)
Q Consensus 157 -~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~ 228 (333)
..+....+++-++.+.+.++..+.......|..|. .+|.+.++.+....+|+.++|.+.+++ .|...|++.
T Consensus 357 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~ 435 (465)
T TIGR00894 357 LSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIM 435 (465)
T ss_pred cCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHH
Confidence 22333344444555555555555554555566654 899999999999999999999887754 377888888
Q ss_pred HHHHHHHHHHhhcc
Q psy15539 229 ALLPIFFVGLMLLM 242 (333)
Q Consensus 229 ~~~~~~~~~~~~~~ 242 (333)
++..++..+...++
T Consensus 436 ~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 436 AFVNILCVIFYLIF 449 (465)
T ss_pred HHHHHHHHHHeeee
Confidence 77777765555444
No 175
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.12 E-value=3.8e-09 Score=94.90 Aligned_cols=122 Identities=17% Similarity=0.203 Sum_probs=94.5
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH-----hhHHHHHHH
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS-----QSVIMFCAG 166 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 166 (333)
.|.+.++ .+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+.++..++.+++.+. .+...++..
T Consensus 229 ~~~~~~~--~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (385)
T TIGR00710 229 APFVYID--IMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGP 306 (385)
T ss_pred ChHHHHH--HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 4545442 278888999999999999999999999999999999999988887777776665543 234455556
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHH-HHHHHHHHHHh
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQC-TAGILFVYAVG 216 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~-~~g~~~~~~~~ 216 (333)
.++.|++.+...+.......|..| ++|+++.++.+... .+|.+.++.++
T Consensus 307 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 307 MMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 778889888888888888888886 67899999876554 45666666655
No 176
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.12 E-value=2.1e-09 Score=97.41 Aligned_cols=126 Identities=11% Similarity=0.023 Sum_probs=102.4
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhh-ccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVD-TVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLL 169 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (333)
.+|.+.++ .+.++.+.+++.+...++...+..+.+.+.| |++.++.+..+.++.+++.+++++.++.+.+.+..++
T Consensus 230 ~~p~~~~~---~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 306 (400)
T PRK11646 230 MLPIMVND---IAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICL 306 (400)
T ss_pred hhhhhHHh---hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 46777766 5556778888888877777666665566655 5776777778888888888777777887777777788
Q ss_pred HhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 170 TGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 170 ~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.|++.+...+...+++.+..|+++||++.++.+....+|..++|.+++++
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l 356 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWL 356 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHH
Confidence 88888888888899999999999999999999999999999999998887
No 177
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.12 E-value=8.7e-10 Score=100.25 Aligned_cols=143 Identities=10% Similarity=0.050 Sum_probs=95.0
Q ss_pred chhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHH-HHHHHHHHHHHHHHHHHHhhHHHHHHH
Q psy15539 88 TSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNT-MLLLAVPTLVGWGLIIWSQSVIMFCAG 166 (333)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (333)
+...+|.+.++ ...+.+..+.+.+.+...++..++.++.|+++||++||+. +....++.+++.++.....+....+++
T Consensus 261 ~~~~~p~~l~~-~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (412)
T TIGR02332 261 INIWTPQILQS-FNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLG 339 (412)
T ss_pred HHHHHHHHHHh-cCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 44457778765 0135677788999999999999999999999999997775 333444444433222222222222222
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHH
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVYGLSIICALL 231 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~ 231 (333)
-++.+++.....+.......|.+|++.|+++.|+.+....+|.+++|.+.+.+ +|...+++.++.
T Consensus 340 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 340 IIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 22333333333344445567889999999999999999999999999887665 477776665544
No 178
>PRK10054 putative transporter; Provisional
Probab=99.11 E-value=1.8e-09 Score=97.54 Aligned_cols=132 Identities=16% Similarity=0.057 Sum_probs=103.6
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHhhhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS-QSVIMFCAGRLLTGFGGGSFAVV 180 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~ 180 (333)
.+.+....+++.+...+.....+++.|.+.||+++|+.+..+.++.+++.+...+. .+.+.+.+..++.|+|.+...|.
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~ 318 (395)
T PRK10054 239 SDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPG 318 (395)
T ss_pred cchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 56666677888888888888888899999999999999999988888887777654 56666777888999999888888
Q ss_pred hhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q psy15539 181 VPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIF 234 (333)
Q Consensus 181 ~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~ 234 (333)
....+.+..|++.|+++.+..+ ...+|..++|.+++++ +....+++.+....+
T Consensus 319 ~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~ 375 (395)
T PRK10054 319 EYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVA 375 (395)
T ss_pred HHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHH
Confidence 8889999999999999988655 4557888888888777 444555554444333
No 179
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.11 E-value=6e-09 Score=94.20 Aligned_cols=139 Identities=10% Similarity=0.069 Sum_probs=103.6
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTG 171 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 171 (333)
.|.+.++ +|.+..+.+.+...+.++..++.++.+++.||.+++..+....+......++....++.+.+.+..++.|
T Consensus 240 ~p~~~~~---~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G 316 (394)
T PRK10213 240 RPVYMNL---AGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWG 316 (394)
T ss_pred HHHHHHh---cCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4667666 8999989999999999999999999999999965443343333334444444455567777778889999
Q ss_pred hhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q psy15539 172 FGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIF 234 (333)
Q Consensus 172 ~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~ 234 (333)
++.+...+...+++.+..| +++++..++......+|..+|+.+++++ +++..++..+++.++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 317 LTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHH
Confidence 9999888888888888887 4566777777777788888888888877 566666665554443
No 180
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.11 E-value=3.4e-10 Score=100.90 Aligned_cols=142 Identities=18% Similarity=0.088 Sum_probs=119.4
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDT-VGRKNTMLLLAVPTLVGWGLIIWSQ--SVIMFCAGRLLTGFGGGSFA 178 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~g~~~ 178 (333)
+|++++++.-+.+.+..---+...++||++|| +|+|+.++.|.++++++.++.+... +...++++-.+.++|.|..-
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 56898888777777766666888899999998 7999999999999999999999884 77888888888899999999
Q ss_pred hhhhhhhcccCCCcc--hhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhhccc
Q psy15539 179 VVVPMYTAEIAETEI--RGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLMLLMP 243 (333)
Q Consensus 179 ~~~~~~~~e~~~~~~--rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 243 (333)
+...++++|.+|++. |-.+.+++.++..+|++++|++.+++ +|...|...++-..+.++.+++.+
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999997644 45567778888889999999998877 788888888887777766666544
No 181
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.10 E-value=3.8e-09 Score=95.08 Aligned_cols=141 Identities=13% Similarity=0.084 Sum_probs=100.3
Q ss_pred hhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHh
Q psy15539 93 DRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW-SQSVIMFCAGRLLTG 171 (333)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G 171 (333)
|.+.+. .|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+.++.+++.++... .++.+...+..++.+
T Consensus 224 ~~~~~~---~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 300 (382)
T PRK10091 224 PYMMFI---SGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICC 300 (382)
T ss_pred HHHHHh---cCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 444444 7889999999999999999999999999999999999999888887777765543 444455555666666
Q ss_pred hhhhhhhhhhh-hhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHH
Q psy15539 172 FGGGSFAVVVP-MYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVYGLSIICALLPIFFVGL 238 (333)
Q Consensus 172 ~~~g~~~~~~~-~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 238 (333)
++.++..+... ....+..+++.++.+ ..+....+|..++|.+++++ +|+..+.+.+++.++.+..
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 371 (382)
T PRK10091 301 AGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSS 371 (382)
T ss_pred HHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHH
Confidence 66554444333 334444555555544 34567788888999888876 5777777777666654433
No 182
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.10 E-value=3.2e-09 Score=94.85 Aligned_cols=149 Identities=12% Similarity=0.067 Sum_probs=97.1
Q ss_pred hhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccch---hHHHHH-HHHHHHHHHHHHHHHhhHHHHH
Q psy15539 89 SPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGR---KNTMLL-LAVPTLVGWGLIIWSQSVIMFC 164 (333)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr---r~~l~~-~~~~~~~~~~~~~~~~~~~~~~ 164 (333)
...+|.+.++ .|.+.. .+...++..++..++ .++++||..| |+.... ..++.++...+..+..+....+
T Consensus 212 ~~wlp~~L~~---~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 284 (368)
T TIGR00903 212 AIWLEAALRP---AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALF 284 (368)
T ss_pred HHHHHHHHHH---CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHH
Confidence 3457888876 666654 555555555554444 4677777654 333332 3344444444444444444445
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH--HHHHHHHHHHHHHHHHHHHhhcc
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA--SVYGLSIICALLPIFFVGLMLLM 242 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
++-++.|++....++..+++.+|.+|++.||++.|+.+....+|+.++|.+.+.+ +....|.+.+++.++..+..+.+
T Consensus 285 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~~~~~~~ 364 (368)
T TIGR00903 285 AFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFISSAEAYFTFLAILITIAFAIALLL 364 (368)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhC
Confidence 5556677777777788889999999999999999999999999998888777654 45566666666666655444443
Q ss_pred cC
Q psy15539 243 PE 244 (333)
Q Consensus 243 ~e 244 (333)
++
T Consensus 365 ~~ 366 (368)
T TIGR00903 365 PN 366 (368)
T ss_pred CC
Confidence 43
No 183
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.10 E-value=1.3e-09 Score=101.53 Aligned_cols=127 Identities=12% Similarity=0.029 Sum_probs=107.7
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS---QSVIMFCAGR 167 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 167 (333)
..|.+.+. ..|.++.+.++....+.++..++.++.|++.||+|+|+.+..+.++.+++.+++... .+.+...+..
T Consensus 281 ~~~~~lq~--v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 358 (495)
T PRK14995 281 LMAQELQF--VHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLM 358 (495)
T ss_pred HHHHHHHH--HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 45555443 278999999999999999999999999999999999999988888888777665442 3555566778
Q ss_pred HHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 168 LLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 168 ~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
++.|++.|...+.....+.+..|+++++.+.++.+....+|..+|+.+.+.+
T Consensus 359 ~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 359 ALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLL 410 (495)
T ss_pred HHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999998888888888999999999999999999999999999888776
No 184
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.09 E-value=1.3e-09 Score=111.62 Aligned_cols=127 Identities=10% Similarity=-0.076 Sum_probs=105.5
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH-------------
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS------------- 157 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------------- 157 (333)
.+|.+..+ .+|.+....+++.+++.+|.+++.++.|+++|+.++++.+..+.++.+++.+.+.+.
T Consensus 247 ~~p~~~~~--~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 324 (1140)
T PRK06814 247 QLPLLAKE--TLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKS 324 (1140)
T ss_pred HhHHHHHH--HcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccc
Confidence 45666654 378899999999999999999999999999998888777666666665555444432
Q ss_pred -------hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 158 -------QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 158 -------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.+.+.++++.++.|++.+...+...+++.+.+|++.||+++|+.++...+|..+++++.+.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l 393 (1140)
T PRK06814 325 ILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALL 393 (1140)
T ss_pred hhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 56677788888999999999989999999999999999999999999999998888887666
No 185
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.09 E-value=3.6e-09 Score=96.76 Aligned_cols=128 Identities=16% Similarity=0.156 Sum_probs=105.3
Q ss_pred hhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHH
Q psy15539 89 SPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ--SVIMFCAG 166 (333)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~ 166 (333)
....+.+.+. ..+.+ ...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++..+.+ +.+.+++.
T Consensus 245 ~~~~~y~~~~--vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 321 (428)
T PF13347_consen 245 NTFLPYYFTY--VLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLIL 321 (428)
T ss_pred hhHHHHHHHH--HhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 3334445444 13333 5678888889999999999999999999999999999999999999888876 89999999
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCCC-------cchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAET-------EIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~~-------~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.++.|++.+...+...++++|..+. +..|...+..+....+|..+++.+.+.+
T Consensus 322 ~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 322 FILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred HHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999873 3347788888888888888887776544
No 186
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.09 E-value=9.8e-10 Score=97.34 Aligned_cols=123 Identities=21% Similarity=0.206 Sum_probs=102.8
Q ss_pred chhhhhhh-hcCCcccccC-chhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH---HhhHHH
Q psy15539 88 TSPAGDRL-IAGEYPFLVT-ESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW---SQSVIM 162 (333)
Q Consensus 88 ~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~ 162 (333)
.....|.+ .+. +|.+ ..+.+.+.+...++..++.++.|++.||+|+|+.+.+......+..+...+ ..+...
T Consensus 225 ~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (352)
T PF07690_consen 225 FSFFLPLYLQEV---LGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVW 301 (352)
T ss_dssp HHHHHHHHCCHH---HHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHH
T ss_pred hhcccchhhhhc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 44456666 444 8888 788999999999999999999999999999988877777666666555543 335567
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHH
Q psy15539 163 FCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVY 213 (333)
Q Consensus 163 ~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~ 213 (333)
.++..++.|++.+...+....++.|.+|+++||++.++.+....+|..++|
T Consensus 302 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 302 LIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 777888899999999999999999999999999999999999999999887
No 187
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.08 E-value=6.3e-09 Score=93.63 Aligned_cols=156 Identities=18% Similarity=0.200 Sum_probs=117.9
Q ss_pred ccchhhhhhhhcCCcccc-cCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH-hhHHHH
Q psy15539 86 GWTSPAGDRLIAGEYPFL-VTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS-QSVIMF 163 (333)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~ 163 (333)
..+....+.+.++ .| .+....+.+.++..++-++.-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+..
T Consensus 224 ~~~~~f~~~yl~~---~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~ 300 (400)
T PF03825_consen 224 AAYYTFFSIYLQE---LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFI 300 (400)
T ss_pred HHHHHHHHHHHHH---cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 3333445666776 66 666777877788888888899999999999999999999999998888888776 444433
Q ss_pred HHH----HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHH-HHHHHHHHHHHHhHHH----------HHHHHHHHH
Q psy15539 164 CAG----RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQL-QCTAGILFVYAVGSWA----------SVYGLSIIC 228 (333)
Q Consensus 164 ~~~----~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~-~~~~g~~~~~~~~~~~----------~~~~~~~~~ 228 (333)
.+. ..+.|+..+..+.....++.+..|++.|+++.++++. ..++|..++..+++++ .|...+.+.
T Consensus 301 ~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~ 380 (400)
T PF03825_consen 301 VALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVF 380 (400)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence 333 4569999999999999999999999999999999664 6789999999999887 244455555
Q ss_pred HHHHHHHHHH-hhcccC
Q psy15539 229 ALLPIFFVGL-MLLMPE 244 (333)
Q Consensus 229 ~~~~~~~~~~-~~~~~e 244 (333)
+++.++..+. .++++|
T Consensus 381 a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 381 AVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHhhccC
Confidence 5555443333 334444
No 188
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.08 E-value=3.4e-09 Score=94.39 Aligned_cols=126 Identities=13% Similarity=0.054 Sum_probs=98.0
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhcc-chhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTV-GRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRL 168 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (333)
..+|.+.++ .|.+..+.+.+.+...++.++++++.|++.||+ +||+.+.++.++.+++.+++.+..+..... ..+
T Consensus 218 ~~lp~~~~~---~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 293 (355)
T TIGR00896 218 GWLPAILIS---HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WAL 293 (355)
T ss_pred HHHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHH
Confidence 346777777 788999999999999999999999999999999 566677777777777776666655433222 456
Q ss_pred HHhhhhhhhhhhhhhhhcccC-CCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 169 LTGFGGGSFAVVVPMYTAEIA-ETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 169 l~G~~~g~~~~~~~~~~~e~~-~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+.|++.|..++...+.+.+.. +++.++...++.+....+|..++|.+.+++
T Consensus 294 l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l 345 (355)
T TIGR00896 294 VLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVL 345 (355)
T ss_pred HHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999888888777766554 456778888888887788888888887766
No 189
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.07 E-value=5.2e-09 Score=94.90 Aligned_cols=146 Identities=12% Similarity=0.111 Sum_probs=97.3
Q ss_pred hhhhcCCcccccCchhHHHHHHHHH-HHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH---HHH-hhHHHHHHHH
Q psy15539 93 DRLIAGEYPFLVTESDLSFIGSSMA-LGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLI---IWS-QSVIMFCAGR 167 (333)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~~ 167 (333)
+.+.++ .|.++.+.+++..... ++..++.++.|++.||+|+|+.+.++.++.++..+.. ++. ++.+.+++..
T Consensus 234 ~~l~~~---~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 310 (402)
T PRK11902 234 TFLIRG---AGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAI 310 (402)
T ss_pred HHHHHh---cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 335555 8899999999886654 5688999999999999999998877776665554433 233 3444444443
Q ss_pred ----HHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy15539 168 ----LLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWASVYGLSIICALLPIFFVGLMLL 241 (333)
Q Consensus 168 ----~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (333)
+..|++.+...+....++.+.+|.+.++...+..+.+..+++.++..+....||+..|.+.++++++.++..+.
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 311 GIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 45666677778888888888888766654333333333333333434444448999888888887776555543
No 190
>PRK09848 glucuronide transporter; Provisional
Probab=99.06 E-value=4.4e-09 Score=96.75 Aligned_cols=116 Identities=15% Similarity=0.175 Sum_probs=78.9
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhcc----chhHHH-HHHHHHHHHHHHHHHHHh-------hHHHHHHHHHH
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTV----GRKNTM-LLLAVPTLVGWGLIIWSQ-------SVIMFCAGRLL 169 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~----Grr~~l-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l 169 (333)
.|++..++|.+.+...+..++..++.|+++||. |||+.. .++.+...+..+++...+ ....+++..++
T Consensus 39 ~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (448)
T PRK09848 39 AGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMG 118 (448)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHH
Confidence 799999999999999999999999999999996 777755 555555554444432211 12334445567
Q ss_pred HhhhhhhhhhhhhhhhcccC-CCcchhhHHHHHHHHH-----HHHHHHHHHHhH
Q psy15539 170 TGFGGGSFAVVVPMYTAEIA-ETEIRGTLGTYFQLQC-----TAGILFVYAVGS 217 (333)
Q Consensus 170 ~G~~~g~~~~~~~~~~~e~~-~~~~rg~~~~~~~~~~-----~~g~~~~~~~~~ 217 (333)
.+++.+...+...++..+.. ++++|....+.-..+. .++..++|.++.
T Consensus 119 ~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~ 172 (448)
T PRK09848 119 LGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKN 172 (448)
T ss_pred HHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77778777777777777765 4567888766654332 244445555544
No 191
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.05 E-value=6.8e-09 Score=93.79 Aligned_cols=129 Identities=16% Similarity=0.128 Sum_probs=101.3
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVV 181 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~ 181 (333)
+|.++.+.|++.+...+|..+++++.+++.||.++|+.+..+.+ .++..++..+.++.+...+..++.|++.+...+..
T Consensus 236 lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~ 314 (393)
T PRK11195 236 LGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPM 314 (393)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhH
Confidence 78899999999999999999999999999999999988877753 34444455556677767777888999988888778
Q ss_pred hhhhcccCCCcc-hhhHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHH
Q psy15539 182 PMYTAEIAETEI-RGTLGTYFQLQCTAGILFVYAVGSWA-----SVYGLSIICALL 231 (333)
Q Consensus 182 ~~~~~e~~~~~~-rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~ 231 (333)
.+.+.+..|++. +|++.++.+....+|..++..+.+.+ .+...+...+.+
T Consensus 315 ~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (393)
T PRK11195 315 NALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLL 370 (393)
T ss_pred HHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 888888766655 79999999999999998888887765 334444444444
No 192
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.04 E-value=3.3e-08 Score=91.58 Aligned_cols=115 Identities=10% Similarity=0.133 Sum_probs=89.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH-----HhhHHHHHHHHHHHhhhhhhhhh
Q psy15539 105 TESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW-----SQSVIMFCAGRLLTGFGGGSFAV 179 (333)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~G~~~g~~~~ 179 (333)
+....+++.+...++.+++.+++++++||+|+|+.+.++.++.+++.+...+ ..+.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4456677777777889999999999999999999999888777766555433 23566667777888999999999
Q ss_pred hhhhhhcccCC-------CcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 180 VVPMYTAEIAE-------TEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 180 ~~~~~~~e~~~-------~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
...++++|..+ .+..|...+......-+|..+++.+.+++
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999865 33346677888888888888887776654
No 193
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.04 E-value=1.7e-09 Score=96.06 Aligned_cols=152 Identities=16% Similarity=0.144 Sum_probs=84.4
Q ss_pred hccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH--HHHHHH-HHH----
Q psy15539 85 LGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTL--VGWGLI-IWS---- 157 (333)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~--~~~~~~-~~~---- 157 (333)
.+...+..|.+.++ ..|++.++.|.+.++..+..++.+++.|.++||+|.||-++....+.. .+.+.. .+.
T Consensus 23 ~gi~~pF~~iWL~~--~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~ 100 (412)
T PF01306_consen 23 WGIFLPFFPIWLTQ--VAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQ 100 (412)
T ss_dssp HHHHHHHHHHHHHH--HH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHcc--ccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555667777764 279999999999999999999999999999999997776554332222 222221 222
Q ss_pred hhHH-HHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHH
Q psy15539 158 QSVI-MFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA---SVYGLSIICALLPI 233 (333)
Q Consensus 158 ~~~~-~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~ 233 (333)
.|.+ ..+++-+..|++.....++.-+++.+.. +..+.-.|-.-...++|-+++..+++.+ +....+++..+.++
T Consensus 101 ~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~ 178 (412)
T PF01306_consen 101 SNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAI 178 (412)
T ss_dssp TT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHH
Confidence 2322 2222233334444444444444443332 2223334444456666666666666655 45566666655555
Q ss_pred HHHHHhh
Q psy15539 234 FFVGLML 240 (333)
Q Consensus 234 ~~~~~~~ 240 (333)
+..++.+
T Consensus 179 il~lll~ 185 (412)
T PF01306_consen 179 ILLLLLL 185 (412)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4443333
No 194
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.02 E-value=1.1e-08 Score=91.05 Aligned_cols=143 Identities=15% Similarity=0.109 Sum_probs=118.7
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVV 181 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~ 181 (333)
-+.++...|.+.+..-+.-++.-.+..++.+|+|.|+.++++.+++++=.++++++++.+.+.+.+.+.|+-.+......
T Consensus 254 ~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~ 333 (412)
T PF01306_consen 254 AGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAA 333 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 55666778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCcchhhHHHH-HHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHH-HHHhhcccC
Q psy15539 182 PMYTAEIAETEIRGTLGTY-FQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFF-VGLMLLMPE 244 (333)
Q Consensus 182 ~~~~~e~~~~~~rg~~~~~-~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~e 244 (333)
.-|+++.+|++..++...+ .+...++|..+.+.+++.+ |.+..|++.+.+.++. ++.++.++.
T Consensus 334 fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 334 FKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 9999999999998888877 5788888888888888877 7777887777776654 444555543
No 195
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.02 E-value=1.9e-08 Score=90.21 Aligned_cols=116 Identities=8% Similarity=-0.079 Sum_probs=82.6
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH----HhhHHHHHHHHHHHhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW----SQSVIMFCAGRLLTGFGGGSF 177 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~G~~~g~~ 177 (333)
+|.++.+.+++.+...++..++.++.|++.||+|||+.+.++.++..+..+.... ..+.+.+.++..+.+.+.+..
T Consensus 225 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T PRK11102 225 NGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMI 304 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh
Confidence 7888899999999999999999999999999999999998887665444333222 123444444444444445555
Q ss_pred hhhhhhhhcccCCCcchhhHHHHHHH-HHHHHHHHHHHHhHH
Q psy15539 178 AVVVPMYTAEIAETEIRGTLGTYFQL-QCTAGILFVYAVGSW 218 (333)
Q Consensus 178 ~~~~~~~~~e~~~~~~rg~~~~~~~~-~~~~g~~~~~~~~~~ 218 (333)
......++.|..| +.||.+.++.+. ...+|..+++.++..
T Consensus 305 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 305 SSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred hHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5555666777766 789999988554 456777777776543
No 196
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.00 E-value=1.8e-08 Score=91.06 Aligned_cols=127 Identities=13% Similarity=0.011 Sum_probs=86.0
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVV 181 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~ 181 (333)
+|.+..+.+.+.+...++.+++.++.+++.||+|||+.+.++.++..++.++..+..+....++...+.+.+.+...+..
T Consensus 234 ~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 313 (392)
T PRK10473 234 MGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVA 313 (392)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 78888889999999999999999999999999999999999998888888877776555444444444444444333322
Q ss_pred hhhhcccCCCcch-hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q psy15539 182 PMYTAEIAETEIR-GTLGTYFQLQCTAGILFVYAVGSWASVYGLSIICAL 230 (333)
Q Consensus 182 ~~~~~e~~~~~~r-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 230 (333)
...+..|.++| |.+.++...+..+|..+++.+.+..++.......+.
T Consensus 314 --~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 314 --MSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGI 361 (392)
T ss_pred --HHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 33344454444 455555566666666666666665555443333333
No 197
>PRK09669 putative symporter YagG; Provisional
Probab=98.98 E-value=6.3e-08 Score=88.99 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy15539 108 DLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW--SQSVIMFCAGRLLTGFGGGSFAVVVPMYT 185 (333)
Q Consensus 108 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~g~~~~~~~~~~ 185 (333)
..+.+.....++.+++.+++++++||+|+|+.+.++.++.++..+...+ ..+.+.+++..++.|++.+...+...+++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556667888889999999999999999998887766654443333 24666777788899999999999999999
Q ss_pred cccCCC-------cchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 186 AEIAET-------EIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 186 ~e~~~~-------~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+|..+. +..|...+..+....+|..+++.+++++
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998752 3345667778778888888888777654
No 198
>KOG4686|consensus
Probab=98.97 E-value=6e-09 Score=86.20 Aligned_cols=143 Identities=18% Similarity=0.206 Sum_probs=106.6
Q ss_pred hhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHhhh
Q psy15539 95 LIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVP-TLVGWGLIIWSQSVIMFCAGRLLTGFG 173 (333)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~G~~ 173 (333)
+.+. +|+|+...+.+.+....-..+..++.|.++||+|++...+.+..+ ..++.....++ .+.=++.-.++|+.
T Consensus 291 F~~r---fGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLs 365 (459)
T KOG4686|consen 291 FQKR---FGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLS 365 (459)
T ss_pred HHHh---hCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhh
Confidence 4455 999999999999999999999999999999999999887765444 33444444332 22223455667777
Q ss_pred hhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH--------HHHHHHHHHHHHHHHHHHHhhcc
Q psy15539 174 GGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA--------SVYGLSIICALLPIFFVGLMLLM 242 (333)
Q Consensus 174 ~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
........+..++.+.|.++.|++.|..+....+|-.+.|++++.+ +-+..|++++.+++..+.+.+.+
T Consensus 366 ysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 366 YSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 7776667788888999999999999999999999999999998876 23445555555555554444443
No 199
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.97 E-value=2.7e-08 Score=89.45 Aligned_cols=155 Identities=16% Similarity=0.154 Sum_probs=113.6
Q ss_pred hhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhc----cchhHH-HHHHHHHHHHHHHHHHHHh-----
Q psy15539 89 SPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDT----VGRKNT-MLLLAVPTLVGWGLIIWSQ----- 158 (333)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr~~-l~~~~~~~~~~~~~~~~~~----- 158 (333)
...+..+..+ ..|+++..+|.+..+.=+--++..|+.|.+.|| +||+|. ++++.+-.++.++++..++
T Consensus 32 ~~yLl~fYTd--v~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~ 109 (467)
T COG2211 32 VLYLLFFYTD--VFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMT 109 (467)
T ss_pred HHHHHHHHhc--ccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccC
Confidence 3334444444 389999999999999999999999999999994 777655 5567788888888888765
Q ss_pred -hHHHHHHHHHHHhhhhhhhhhhhhhhhcccC-CCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----------HHHHHH
Q psy15539 159 -SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIA-ETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----------SVYGLS 225 (333)
Q Consensus 159 -~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~-~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~ 225 (333)
+....++...+.+++.........++.+|+. .+++|.+..+.-+.+..+|.++...+...+ +|+...
T Consensus 110 ~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~ 189 (467)
T COG2211 110 GKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTA 189 (467)
T ss_pred cchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHH
Confidence 3455566678888888888888888888986 578999999998888888866654443322 677776
Q ss_pred HHHHHHHHHHHHHhh-cccCC
Q psy15539 226 IICALLPIFFVGLML-LMPES 245 (333)
Q Consensus 226 ~~~~~~~~~~~~~~~-~~~e~ 245 (333)
.+.+++.++..+..+ -.+|.
T Consensus 190 ~~~~vi~~i~~l~~~~~v~ER 210 (467)
T COG2211 190 LVLGVIGVILLLFCFFNVKER 210 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhcc
Confidence 666666665444333 34443
No 200
>PRK10133 L-fucose transporter; Provisional
Probab=98.95 E-value=2.8e-08 Score=91.06 Aligned_cols=115 Identities=7% Similarity=-0.114 Sum_probs=92.2
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVV 181 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~ 181 (333)
+|.++.+.++....+.++..++.++.+++.||+|+|+++..+.++.+++.++..+.++. ..+...++.|++.+..+|..
T Consensus 290 ~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~ 368 (438)
T PRK10133 290 PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTI 368 (438)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999988887777766665555553 23456778999999999999
Q ss_pred hhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 182 PMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 182 ~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.+...+.+|++ .+.+.++.... .+|..++|.+.+.+
T Consensus 369 ~s~a~~~~~~~-~~~as~l~~~~-~~g~~~~~~i~G~l 404 (438)
T PRK10133 369 FSLGIKNLGQD-TKYGSSFIVMT-IIGGGIVTPVMGFV 404 (438)
T ss_pred HHHHHcccchh-hccchhHHhHH-hccchHHHHHHHHH
Confidence 99999988753 56777776543 35666666666655
No 201
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.93 E-value=1.2e-08 Score=89.19 Aligned_cols=144 Identities=17% Similarity=0.147 Sum_probs=108.2
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh-------hHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ-------SVIM 162 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-------~~~~ 162 (333)
..+|.+.++ +++.++.+.+.+.+.+.+...+..+..|+++||+|.+|++.+....++++..+..+.. +...
T Consensus 239 ~~l~~~~~~--~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~ 316 (417)
T COG2223 239 AYLPMYLVT--QFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVV 316 (417)
T ss_pred HHHHHHHHH--hcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHH
Confidence 346666655 5999999999999999999999999999999999999999999988888888777642 3333
Q ss_pred ----HHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHH
Q psy15539 163 ----FCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVYGLSIICALLPI 233 (333)
Q Consensus 163 ----~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~ 233 (333)
++...+..|+|.|.. +..+..++|. +-|.+.|+.....++|+...|..-+.. .+...|++.....+
T Consensus 317 ~~~~~l~l~~~~G~GnGsv----fk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~ 391 (417)
T COG2223 317 FVAVFLALFVFAGLGNGSV----FKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYL 391 (417)
T ss_pred HHHHHHHHHHHhccCcchh----eeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 444555666666654 4455566653 678899999999999988877776655 47777777776666
Q ss_pred HHHHHhh
Q psy15539 234 FFVGLML 240 (333)
Q Consensus 234 ~~~~~~~ 240 (333)
+..+..+
T Consensus 392 ~a~v~~~ 398 (417)
T COG2223 392 VALVLTW 398 (417)
T ss_pred HHHHHHH
Confidence 6554443
No 202
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.90 E-value=2.6e-08 Score=88.17 Aligned_cols=145 Identities=17% Similarity=0.201 Sum_probs=115.4
Q ss_pred cccCchhHH-HHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhh
Q psy15539 102 FLVTESDLS-FIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVV 180 (333)
Q Consensus 102 ~~~~~~~~~-~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~ 180 (333)
.|++..++. -+.-...-.+++..++...+.|..|.|++++++.+...+..+++.+.++...+.+.-++.|++.+. ...
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-eva 113 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVA 113 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHH
Confidence 677777653 455666677788888999999999999999999999999999999999999999999999999874 566
Q ss_pred hhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHHHHHHHhhcccCChH
Q psy15539 181 VPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA------SVYGLSIICALLPIFFVGLMLLMPESPQ 247 (333)
Q Consensus 181 ~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 247 (333)
.++|+-...|+++--++.+.......+|..++.+++..+ ++....++......++++..+++|..++
T Consensus 114 y~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 114 YYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 778888888888888888887777777777777777655 4556666666655666667777887654
No 203
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.89 E-value=4.4e-08 Score=89.06 Aligned_cols=146 Identities=14% Similarity=0.035 Sum_probs=88.5
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH-H-----hhHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW-S-----QSVIMFC 164 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~-----~~~~~~~ 164 (333)
.+|.+.++ .+ +.........+..+...++.+++|+++||+|+|+++.++.++..++...... . .+++.+.
T Consensus 274 ~lp~~~~~--~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~ 349 (462)
T PRK15034 274 GFAMLAKT--QF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFY 349 (462)
T ss_pred HHHHHHHH--Hc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHH
Confidence 45656554 12 2223333344456778889999999999999999999988877776543222 2 2345444
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCC---------------------cchhhHHHHHHHHHHHHHHHHHHHhHHH----
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAET---------------------EIRGTLGTYFQLQCTAGILFVYAVGSWA---- 219 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~---------------------~~rg~~~~~~~~~~~~g~~~~~~~~~~~---- 219 (333)
+..+...++.|......+.++..++|+ ++-|.+.|+.....++|+.+.|.+.+..
T Consensus 350 ~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~ 429 (462)
T PRK15034 350 AVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMT 429 (462)
T ss_pred HHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHc
Confidence 444443344444444455556566653 1456778888888888888888665544
Q ss_pred -HHHHHHHHHHHHHHHHHHHhh
Q psy15539 220 -SVYGLSIICALLPIFFVGLML 240 (333)
Q Consensus 220 -~~~~~~~~~~~~~~~~~~~~~ 240 (333)
++...++...+..++.+++.|
T Consensus 430 g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 430 GSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred CCcHHHHHHHHHHHHHHHHHHH
Confidence 345555555555554443333
No 204
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.86 E-value=1.7e-07 Score=87.36 Aligned_cols=126 Identities=11% Similarity=0.047 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHhhhccchhHHHHHHHHHHHHHHHHHHHHhh---------HHHHHHHHHHHhhhhh
Q psy15539 109 LSFIGSSMALGAVFGSPVV----GNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQS---------VIMFCAGRLLTGFGGG 175 (333)
Q Consensus 109 ~~~~~~~~~~~~~i~~~~~----g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~G~~~g 175 (333)
.+++.++..+...+..++. +++.+|++..+.+.+|.++.+++.+......+ .++++...++.|+|.+
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4555666665555655555 66666776778889999999999888776654 4578889999999999
Q ss_pred hhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH--------------HHHHHHHHHHHHHHH
Q psy15539 176 SFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA--------------SVYGLSIICALLPIF 234 (333)
Q Consensus 176 ~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~--------------~~~~~~~~~~~~~~~ 234 (333)
...|...+++.+..|++.||+++|++..+..+|..++..+.... +....|...++.+++
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 470 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAV 470 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888888888877766421 245666666655544
No 205
>PRK11043 putative transporter; Provisional
Probab=98.85 E-value=2.5e-07 Score=83.82 Aligned_cols=124 Identities=10% Similarity=-0.005 Sum_probs=93.4
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH---H--HhhHHHHHHH
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLII---W--SQSVIMFCAG 166 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~--~~~~~~~~~~ 166 (333)
.|.+.++ .|.+..+.++......++..++.++.+++.||+|+|+.+..+.+..+++.+.+. . .++...+++.
T Consensus 226 ~p~~~~~---~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (401)
T PRK11043 226 SPFILEQ---MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIP 302 (401)
T ss_pred hHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 5667766 888988999888888889999999999999999999877665555444433322 2 2345555566
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
..+.|++.+..++.......+..| ++||++.++.+.....+...++.+.+.+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l 354 (401)
T PRK11043 303 FCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSAL 354 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 778888888888888887777776 5799999998887776767777666655
No 206
>KOG2532|consensus
Probab=98.85 E-value=1.6e-08 Score=92.34 Aligned_cols=168 Identities=12% Similarity=0.001 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchh--------HH
Q psy15539 68 YMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRK--------NT 139 (333)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr--------~~ 139 (333)
-..++.+.+..+........+...+|.|.++ -+|.+..+.|++.++..+...+..+++|.++||.-+| |.
T Consensus 257 s~~vwai~~~~f~~~~~~~~l~~y~PtY~~~--VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rki 334 (466)
T KOG2532|consen 257 SPPVWAIWISAFGGNWGFYLLLTYLPTYLKE--VLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKI 334 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH--HhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHH
Confidence 3445555566666666666667778999987 4899999999999999999999999999999988552 22
Q ss_pred -HHHHHHHHHHHHHHHHHHhh--H----HHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHH
Q psy15539 140 -MLLLAVPTLVGWGLIIWSQS--V----IMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFV 212 (333)
Q Consensus 140 -l~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~ 212 (333)
-.++....+++.+.+++.++ . ..+.+.-.+.|+..++.+ .-..+. .+++-+..+|+.+....++++++
T Consensus 335 fn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~----~~~~~~-apq~a~~l~g~~~~~~~~~~~~~ 409 (466)
T KOG2532|consen 335 FNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFY----KNHQDI-APQHAGFVMGIINFVGALAGFIA 409 (466)
T ss_pred HHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhH----hhhhhc-cchHHHHHHHHHHHHHHHHHHHH
Confidence 23344555555555555542 1 111122223333322222 122222 56778999999999999999999
Q ss_pred HHHhHHH-------HHHHHHHHHHHHHHHHHHHhhcc
Q psy15539 213 YAVGSWA-------SVYGLSIICALLPIFFVGLMLLM 242 (333)
Q Consensus 213 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
|.+.+.+ .|+..|++.+++.++..+.+.++
T Consensus 410 P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 410 PLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 9997655 89999999999888766555444
No 207
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.84 E-value=3.4e-07 Score=82.51 Aligned_cols=128 Identities=16% Similarity=0.184 Sum_probs=99.4
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ--SVIMFCAGR 167 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 167 (333)
..+..|.+. ..|.++....+.......+.+++.++...+.+|+|+|+++.++.++.+++.++..+.+ +.+.+++..
T Consensus 257 s~~~yy~~y--~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~ 334 (467)
T COG2211 257 SIMVYYVTY--VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVAL 334 (467)
T ss_pred hhhheeEEE--EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHH
Confidence 334444443 2555666677777888888888899999999999999999999999999999988876 778888888
Q ss_pred HHHhhhhhhhhhhhhhhhcccCCC-------cchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 168 LLTGFGGGSFAVVVPMYTAEIAET-------EIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 168 ~l~G~~~g~~~~~~~~~~~e~~~~-------~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
++.+++.+...+..+++++|..+- +.-|...+......-+|..++..+.++.
T Consensus 335 ~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 335 IIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred HHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988643 2225566666766667777766655544
No 208
>KOG0252|consensus
Probab=98.84 E-value=3.5e-09 Score=93.24 Aligned_cols=176 Identities=19% Similarity=0.064 Sum_probs=119.5
Q ss_pred HHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHH--------HHH-HHHHHHHHHHHHHHHhhhccchhHH
Q psy15539 69 MAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSF--------IGS-SMALGAVFGSPVVGNLVDTVGRKNT 139 (333)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~i~~~~~g~l~dr~Grr~~ 139 (333)
..++..+..+|+.....+..+.....+.+. .|+.+..... ... +..++++.|-.+..++.|++|||+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~---ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~i 380 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSA---IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYI 380 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHh---hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHH
Confidence 555556666666555554444455556554 4544333222 111 1223344466777889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHh-hhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHH
Q psy15539 140 MLLLAVPTLVGWGLIIWSQS----VIMFCAGRLLTG-FGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYA 214 (333)
Q Consensus 140 l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~G-~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~ 214 (333)
.+.|.+++++..+..+...| ...++++..+.. ++.-+.......+.+|.+|.+.||++.|+.....-+|.+++..
T Consensus 381 q~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~ 460 (538)
T KOG0252|consen 381 QLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAF 460 (538)
T ss_pred HHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHH
Confidence 99999999999888877654 112222222222 2223334455667799999999999999999998999888877
Q ss_pred HhHHH---------HHHHHHHHHHHHHHHHHHHhhcccCChH
Q psy15539 215 VGSWA---------SVYGLSIICALLPIFFVGLMLLMPESPQ 247 (333)
Q Consensus 215 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 247 (333)
.-.++ +.+..+++.+.+.++..+..+++||+.+
T Consensus 461 ~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 461 GFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred HhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 76554 5678899999999998888899999864
No 209
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.82 E-value=1.9e-07 Score=80.45 Aligned_cols=144 Identities=24% Similarity=0.294 Sum_probs=110.7
Q ss_pred ccchhhhhhhhcCCcccccCc--hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh--HH
Q psy15539 86 GWTSPAGDRLIAGEYPFLVTE--SDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQS--VI 161 (333)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~ 161 (333)
.......+.+..+ .+.+. ...++..+.+.++..++.++.|.++||+|||+.+..+.....++.+...+..+ ..
T Consensus 19 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (338)
T COG0477 19 GLLSPALPLLLST---LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLA 95 (338)
T ss_pred chHHHHHHHHHHH---cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHH
Confidence 3334445555555 55444 47899999999999999999999999999998888887765666666666655 88
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcccCCC-cchhhHHHHHHH-HHHHHHHHHHHHhHHH------HHHHHHHHHHHHH
Q psy15539 162 MFCAGRLLTGFGGGSFAVVVPMYTAEIAET-EIRGTLGTYFQL-QCTAGILFVYAVGSWA------SVYGLSIICALLP 232 (333)
Q Consensus 162 ~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~-~~rg~~~~~~~~-~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~ 232 (333)
.+++.|++.|++.+...+...+++.|+.|. +.|+...+.... ...+|..+++.++..+ +|+..+.+.....
T Consensus 96 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 96 LLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 899999999999999999999999999988 678888888777 5777778887666544 5777555544444
No 210
>KOG0254|consensus
Probab=98.82 E-value=4.3e-07 Score=85.02 Aligned_cols=161 Identities=11% Similarity=0.013 Sum_probs=101.6
Q ss_pred hhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh---
Q psy15539 83 TILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQS--- 159 (333)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--- 159 (333)
........+.+.+.+. .|.+... .+...+..+...++..++.++.||+|||+.++.+.+.++++.++++....
T Consensus 309 tG~~~~~~Y~~~if~~---~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~ 384 (513)
T KOG0254|consen 309 TGINYVFYYSTTIFKS---AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFAL 384 (513)
T ss_pred hCCceEEeehHHHHHh---cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhc
Confidence 3344455556667666 6666443 55566677777888888899999999999999999999999888775421
Q ss_pred ----------HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHh-HHHHH---HHHH
Q psy15539 160 ----------VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVG-SWASV---YGLS 225 (333)
Q Consensus 160 ----------~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~-~~~~~---~~~~ 225 (333)
...+...-+.......+..++.+.+.+|.+|.+.|+++.++......+...+..... ....+ ...|
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f 464 (513)
T KOG0254|consen 385 YYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTF 464 (513)
T ss_pred cCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchH
Confidence 112222222222333345566777889999999999999986555444443332222 22222 3344
Q ss_pred HHHHHHHHH-HH-HHhhcccCChH
Q psy15539 226 IICALLPIF-FV-GLMLLMPESPQ 247 (333)
Q Consensus 226 ~~~~~~~~~-~~-~~~~~~~e~~~ 247 (333)
.+.+..+.+ .. ..++++||+..
T Consensus 465 ~~f~~~~~~~~~~fv~~~~pETkg 488 (513)
T KOG0254|consen 465 GYFGGICLLSLIIFVFFFVPETKG 488 (513)
T ss_pred HHHHHHHHHHHHHHheEEcccCCC
Confidence 444444443 44 46668899853
No 211
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.79 E-value=3e-07 Score=85.19 Aligned_cols=130 Identities=16% Similarity=0.133 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccch-----hHHH--HHHHHHHHHHHHHHHH---------HhhHHHHHHHHHHHhh
Q psy15539 109 LSFIGSSMALGAVFGSPVVGNLVDTVGR-----KNTM--LLLAVPTLVGWGLIIW---------SQSVIMFCAGRLLTGF 172 (333)
Q Consensus 109 ~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-----r~~l--~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~G~ 172 (333)
.+++.++..+.-++.+++..++..+.+| +... .+|.++.+++.+..++ ..|++++++..++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 6777888888888887776544333333 3333 6788888888777664 3588999999999999
Q ss_pred hhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHH
Q psy15539 173 GGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFVGL 238 (333)
Q Consensus 173 ~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 238 (333)
|.....|...+++.+..|++.||+++|++.....+|..+++.+.... +|...+...++.+++..+.
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVV 463 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998887765 5666666666665554333
No 212
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.79 E-value=4.1e-11 Score=110.23 Aligned_cols=153 Identities=15% Similarity=0.096 Sum_probs=96.6
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH--H--Hh-h----H
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLII--W--SQ-S----V 160 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--~~-~----~ 160 (333)
.+.+.+.+. .+.+.. -.......+...++.++..++.||+|||+.++++.++.+++++.++ . .. + -
T Consensus 274 ~~~~~i~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 274 YYSPSIFEN---AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWS 348 (451)
T ss_pred ccccccccc---cccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 334556555 666655 2223344455667777778999999999999999988888877664 1 11 1 1
Q ss_pred HHHHHHHHHHhhhhh-hhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHH-H
Q psy15539 161 IMFCAGRLLTGFGGG-SFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPI-F 234 (333)
Q Consensus 161 ~~~~~~~~l~G~~~g-~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~-~ 234 (333)
...+++-.+..++.+ +..+..+.+..|.+|++.|+++.++......++..+++.+...+ +-...+.+.+++++ .
T Consensus 349 ~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~ 428 (451)
T PF00083_consen 349 ILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIA 428 (451)
T ss_pred cccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHH
Confidence 111222222222222 34566678889999999999999998877778877777665544 31233444444444 4
Q ss_pred HHHHhhcccCChH
Q psy15539 235 FVGLMLLMPESPQ 247 (333)
Q Consensus 235 ~~~~~~~~~e~~~ 247 (333)
.++.++++||+..
T Consensus 429 ~i~~~~~lpET~g 441 (451)
T PF00083_consen 429 IIFVYFFLPETKG 441 (451)
T ss_pred HhheeEEEeeCCC
Confidence 4556678999853
No 213
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.76 E-value=2.6e-07 Score=83.46 Aligned_cols=117 Identities=14% Similarity=0.040 Sum_probs=88.6
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH-HHHHHHHH--HhhHHHHHHHHHHHhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTL-VGWGLIIW--SQSVIMFCAGRLLTGFGGGSFA 178 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~l~G~~~g~~~ 178 (333)
+|.+..+.+++.....++..++.++.+++.||+|++........+.. +....... ..+.+.+++..++.|++.+...
T Consensus 238 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 317 (394)
T PRK11652 238 LGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLF 317 (394)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 78888889999888889999999999999999984433322222222 22111122 2355667777889999999999
Q ss_pred hhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 179 VVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 179 ~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+...++..|.+| +.+|.+.++.+....+|..+++.+++..
T Consensus 318 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~ 357 (394)
T PRK11652 318 PLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAML 357 (394)
T ss_pred HHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999989886 5789999999999999999999988877
No 214
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.74 E-value=1.4e-07 Score=87.08 Aligned_cols=119 Identities=7% Similarity=-0.067 Sum_probs=102.1
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH----------hhHHHHHHHHHHH
Q psy15539 101 PFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS----------QSVIMFCAGRLLT 170 (333)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~ 170 (333)
..|.++...|.+.....++.+++..+.+++.+|++.|+++.++.++.+++.+..... ++.+.+...-++.
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~ 361 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIA 361 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHH
Confidence 389999999999999999999999999999999999999999999998877554311 2333445557788
Q ss_pred hhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 171 GFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 171 G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+++.+..+.....++.+..|++.+|+..++.+....+|..+++.+++.+
T Consensus 362 ~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 362 EVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred HHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888999999999999999999999999999999999887766
No 215
>PRK11462 putative transporter; Provisional
Probab=98.73 E-value=1.4e-06 Score=80.44 Aligned_cols=113 Identities=12% Similarity=0.067 Sum_probs=73.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHhhhhhhhhhhhhhh
Q psy15539 107 SDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ--SVIMFCAGRLLTGFGGGSFAVVVPMY 184 (333)
Q Consensus 107 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~ 184 (333)
...+.+.+.+.++.+++.+++++++||+|+|+.+..+.++.++..++..+.+ +...+++.-++.|++.+...+...++
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m 342 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVM 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667788888999999999999999999987765554444344333322 23334455566787777777766777
Q ss_pred hcccCC-------CcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 185 TAEIAE-------TEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 185 ~~e~~~-------~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
++|..+ .+.-|...+......-+|..+++.+++++
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777765 22224444555566666666666655443
No 216
>KOG4686|consensus
Probab=98.72 E-value=1.7e-08 Score=83.64 Aligned_cols=152 Identities=16% Similarity=0.119 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhc-cchhHHHHHH
Q psy15539 65 ITQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDT-VGRKNTMLLL 143 (333)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~ 143 (333)
.++......+++..+...++.-..+..-.++..+ .+++.++..++-+++..-..+-++++|++.|| +|-|..-++-
T Consensus 40 ~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d---~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~ 116 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLD---SNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIIL 116 (459)
T ss_pred hhHHHHHHHHHHhcccceeecCCchhhhhhhhcc---cccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHH
Confidence 3455555555555555544444444444555555 77888888999999999999999999999995 6777666665
Q ss_pred HHHHHHHHHHHH---HHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 144 AVPTLVGWGLII---WSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 144 ~~~~~~~~~~~~---~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
++...++-++++ ....+|.+.++|++.|+|.-.....-+.|..-||..|+.+.++|+......+|+.+-..+.+++
T Consensus 117 ~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~l 195 (459)
T KOG4686|consen 117 CIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFL 195 (459)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHH
Confidence 555666666554 3578999999999999998888888899999999999999999999888888888755555544
No 217
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.71 E-value=5.4e-08 Score=86.91 Aligned_cols=115 Identities=15% Similarity=0.115 Sum_probs=83.1
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH--h--hHHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS--Q--SVIMFCAG 166 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~--~~~~~~~~ 166 (333)
..|.+.++ .+|.++.+.+++.+...++.+++.++.|+++||+|||+.+..+..+...+..+..+. . +...+.+.
T Consensus 247 ~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (366)
T TIGR00886 247 IFAMFFKD--QFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVL 324 (366)
T ss_pred HHHHHHHH--HcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHH
Confidence 35556544 278888999999999999999999999999999999988877776666655554432 2 45444444
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHH
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAG 208 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g 208 (333)
..+.+++.|...+...+.+.+..| +.+|...|+.+....+|
T Consensus 325 ~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 325 FVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 455555555555666677778876 68999999887766554
No 218
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.70 E-value=1.3e-06 Score=75.24 Aligned_cols=166 Identities=13% Similarity=0.034 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccc-hhHHHHHHH
Q psy15539 66 TQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVG-RKNTMLLLA 144 (333)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G-rr~~l~~~~ 144 (333)
..|.......+.++.. +....-+|.+..+ .|+|..+.|++.+...+.....++....+++|.. +|+..+...
T Consensus 209 ~aW~vtLfmGlqS~~~----Y~~~~WLP~ili~---~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~ 281 (395)
T COG2807 209 LAWQVTLFMGLQSLLY----YIVIGWLPAILID---RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLAL 281 (395)
T ss_pred hhHHHHHHHHhhHHHH----HHHHHHHHHHHHH---cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 3444444444444333 2333448888888 9999999999999999999999999999999654 566666677
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCC-CcchhhHHHHHHHHHHHHHHHHHHHhHHH----
Q psy15539 145 VPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAE-TEIRGTLGTYFQLQCTAGILFVYAVGSWA---- 219 (333)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~~~---- 219 (333)
+++.++.+.+.+.+....+.- -++.|+|.|+.++....++..... +++-+...++.|...-+=..++|.+.+++
T Consensus 282 ~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~ 360 (395)
T COG2807 282 LLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT 360 (395)
T ss_pred HHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc
Confidence 777777777777654332222 499999999999999999987764 44445566665554444455688888777
Q ss_pred -HHHHHHHHHHHHHHHHHHHh
Q psy15539 220 -SVYGLSIICALLPIFFVGLM 239 (333)
Q Consensus 220 -~~~~~~~~~~~~~~~~~~~~ 239 (333)
+|+...+..+...++..+.-
T Consensus 361 gsw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 361 GSWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred CChHHHHHHHHHHHHHHHHHH
Confidence 78887777766666554443
No 219
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.66 E-value=1.5e-06 Score=81.15 Aligned_cols=138 Identities=19% Similarity=0.158 Sum_probs=95.2
Q ss_pred HHHhhhhhhhccchhhhhhhhcCCcccccCc---hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHH-HHHHHHHHHHH
Q psy15539 76 IGGFIMGTILGWTSPAGDRLIAGEYPFLVTE---SDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTM-LLLAVPTLVGW 151 (333)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~ 151 (333)
+..+..+........+.|...... ++.+. ...+++.....++..+++++.|.+..+++|-|.. +++.+++.+++
T Consensus 317 vi~fi~G~~~~s~~~l~p~~~~~v--f~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~ 394 (599)
T PF06609_consen 317 VISFISGMNFFSVNILWPQQVVNV--FGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFC 394 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh--ccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHH
Confidence 333444444333334445443331 33332 3567888888999999999999999988875554 56766666655
Q ss_pred HHHHHH--hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHH
Q psy15539 152 GLIIWS--QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAV 215 (333)
Q Consensus 152 ~~~~~~--~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~ 215 (333)
-+++.. +|....+..-++.|++.|...........-..|++.-|.+.++..+...+|+.++..+
T Consensus 395 Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aI 460 (599)
T PF06609_consen 395 GAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAI 460 (599)
T ss_pred HHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHH
Confidence 555443 3555566778899999998887777777778899999999999888888877776655
No 220
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.65 E-value=4.4e-06 Score=79.65 Aligned_cols=139 Identities=17% Similarity=0.211 Sum_probs=109.1
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhh-ccchhHHHHHHHHHHHHHHHHHHHHh--------hHHHHHHHHHHHhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVD-TVGRKNTMLLLAVPTLVGWGLIIWSQ--------SVIMFCAGRLLTGF 172 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~G~ 172 (333)
+|.+.+.+..+...+....-+..+++|+++| ++||++.++++.++..++.++.++.. .....+++-.+.++
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~ 97 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL 97 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh
Confidence 7888888888888887777888889999999 58999999999999999988877642 12335566777888
Q ss_pred hhhhhhhhhhhhhcccCCCcc---hhhHHHHHHHHHHHHHHHHHHHhHHH-----------HHHHHHHHHHHHHHHHHHH
Q psy15539 173 GGGSFAVVVPMYTAEIAETEI---RGTLGTYFQLQCTAGILFVYAVGSWA-----------SVYGLSIICALLPIFFVGL 238 (333)
Q Consensus 173 ~~g~~~~~~~~~~~e~~~~~~---rg~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 238 (333)
|.|++-+...+...|.+++++ |-....++..+..+|+++++.+..++ +|...|.+.+++.++.+++
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 999999999999999987543 55677777788888888888877665 2777888777777766555
Q ss_pred hh
Q psy15539 239 ML 240 (333)
Q Consensus 239 ~~ 240 (333)
++
T Consensus 178 f~ 179 (654)
T TIGR00926 178 FM 179 (654)
T ss_pred HH
Confidence 44
No 221
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.65 E-value=1.2e-06 Score=79.52 Aligned_cols=126 Identities=6% Similarity=-0.175 Sum_probs=91.7
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLL 169 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (333)
..++.+..+. ..+.+....+...+.+..+..+|.++++++.||+++|+++.+..++.++.+++..+.++... ..+-++
T Consensus 253 s~l~~y~~~~-~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~ 330 (410)
T TIGR00885 253 TFIIQYAVRL-IPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTL 330 (410)
T ss_pred HHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHH
Confidence 3455555430 12334444455666677888999999999999999999998888888888888877666443 566777
Q ss_pred HhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 170 TGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 170 ~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.|++.+..+|...+...+..+++.+....++.. + .+|+.+.|.+.+++
T Consensus 331 ~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~-~-~~Gga~~p~l~G~~ 378 (410)
T TIGR00885 331 CSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVM-A-IIGGGIVPPLQGFI 378 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH-H-HhccchHHHHHHHH
Confidence 888888899999999999998765433333322 2 38888888887776
No 222
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.62 E-value=1.7e-06 Score=80.37 Aligned_cols=110 Identities=15% Similarity=0.138 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhHH-------HHHHHHHHHHHHHHHH-----HH-----hhHHHHHHHHHHHh
Q psy15539 109 LSFIGSSMALGAVFGSPVVGNLVDTVGRKNT-------MLLLAVPTLVGWGLII-----WS-----QSVIMFCAGRLLTG 171 (333)
Q Consensus 109 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~-------l~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~l~G 171 (333)
..++.+...+..++..++.+++.||+|+|+. +.+|.++.+++.+..+ .. .+.+.++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 4555666667777899999999999999974 7777777776654331 21 25677788899999
Q ss_pred hhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHH
Q psy15539 172 FGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSW 218 (333)
Q Consensus 172 ~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~ 218 (333)
+|.+...+....++.+..|++.+|.++++++....+|..++..++..
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~ 437 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATF 437 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988877743
No 223
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.59 E-value=5e-07 Score=78.85 Aligned_cols=86 Identities=12% Similarity=0.032 Sum_probs=72.1
Q ss_pred HHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----------------
Q psy15539 156 WSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA---------------- 219 (333)
Q Consensus 156 ~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~---------------- 219 (333)
...++..+++..++.|.|.+...+..++++++..+++++++.+++.+..+++|..++|.+++.+
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4568899999999999999999999999999999999999999999999999999999998732
Q ss_pred ----HHHHHHHHHHHHHHHHHHHhhc
Q psy15539 220 ----SVYGLSIICALLPIFFVGLMLL 241 (333)
Q Consensus 220 ----~~~~~~~~~~~~~~~~~~~~~~ 241 (333)
+|+++|++.+.+.++..+.+.+
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~ 111 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAF 111 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788888666655444333333
No 224
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.58 E-value=1.1e-05 Score=74.26 Aligned_cols=140 Identities=19% Similarity=0.223 Sum_probs=99.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHH-HHHHHHHHHHHHHH-h-hHHHHHHHHHHHhhhhhhhhhhhhhh
Q psy15539 108 DLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLL-AVPTLVGWGLIIWS-Q-SVIMFCAGRLLTGFGGGSFAVVVPMY 184 (333)
Q Consensus 108 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~-~~~~~~~~~~~~~~-~-~~~~~~~~~~l~G~~~g~~~~~~~~~ 184 (333)
..++..++..+..++..|+.|.++|+-|+||.++.. .++.+++++++.+. + +++...+..++.-++.+.......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346778888889999999999999999988776654 45555666666664 3 45555555666667888888889999
Q ss_pred hcccCCCcch--------------------------hhHHHHHHHHHHHHHHHHHHHhHHH------------HHHHHHH
Q psy15539 185 TAEIAETEIR--------------------------GTLGTYFQLQCTAGILFVYAVGSWA------------SVYGLSI 226 (333)
Q Consensus 185 ~~e~~~~~~r--------------------------g~~~~~~~~~~~~g~~~~~~~~~~~------------~~~~~~~ 226 (333)
+.|+.+++.+ ++..+.-....-+|+++...+...+ +-|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999998888 8888776555566666655554332 2466676
Q ss_pred HHHHHHHH-HHHHhhcccCChH
Q psy15539 227 ICALLPIF-FVGLMLLMPESPQ 247 (333)
Q Consensus 227 ~~~~~~~~-~~~~~~~~~e~~~ 247 (333)
+.++.-++ .+..++++|+.|+
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCC
Confidence 76666554 4555667787764
No 225
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.57 E-value=1.2e-05 Score=70.93 Aligned_cols=119 Identities=19% Similarity=0.243 Sum_probs=103.1
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHhhh-ccchhHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHhhhhhh
Q psy15539 101 PFLVTESDLSFIGSSMALGAVFGSPVVGNLVD-TVGRKNTMLLLAVPTLVGWGLIIWS---QSVIMFCAGRLLTGFGGGS 176 (333)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~G~~~g~ 176 (333)
-+|.+..+...+++....|..++-...|++.. |.++++.-.+|+.+.+++..+..++ .+.+.+...-++.|++.|.
T Consensus 238 Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~ 317 (403)
T PF03209_consen 238 VFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGL 317 (403)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhH
Confidence 38999999999999999999999999998777 7888888888888887776665543 5788889999999999999
Q ss_pred hhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 177 FAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 177 ~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
......+.+.+...++.-|..+|.+...+.++..++..+++..
T Consensus 318 f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~ 360 (403)
T PF03209_consen 318 FTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGAL 360 (403)
T ss_pred HHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888999999999999999999999888888888887655
No 226
>KOG3762|consensus
Probab=98.56 E-value=2.2e-07 Score=83.61 Aligned_cols=158 Identities=14% Similarity=0.118 Sum_probs=123.0
Q ss_pred hhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q psy15539 80 IMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQS 159 (333)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 159 (333)
+.|...+.+...+=-.+++ .+..+...|...+.-..|-++.-++.+++..|+|+-+++.+++.+.++=.+..++.+|
T Consensus 382 ~mG~g~~lv~tFLfWHled---~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n 458 (618)
T KOG3762|consen 382 VMGAGVGLVFTFLFWHLED---LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQN 458 (618)
T ss_pred HHHHHHHHHHHHHHHHHhh---cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcC
Confidence 3333333333333334555 6666666777777788888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHH-HHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q psy15539 160 VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQ-LQCTAGILFVYAVGSWA----SVYGLSIICALLPIF 234 (333)
Q Consensus 160 ~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~-~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~ 234 (333)
.|..+..-+++|+..+..+..+.+|++...||+.|.++.++.+ ...++|-.+|.++++.+ +-+..|.+.++.+++
T Consensus 459 ~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~ 538 (618)
T KOG3762|consen 459 PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLV 538 (618)
T ss_pred chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998854 44555555566665554 667777777777766
Q ss_pred HHHHhh
Q psy15539 235 FVGLML 240 (333)
Q Consensus 235 ~~~~~~ 240 (333)
.++...
T Consensus 539 ~l~~~~ 544 (618)
T KOG3762|consen 539 TLALFI 544 (618)
T ss_pred HHHHHH
Confidence 544444
No 227
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.56 E-value=3.5e-07 Score=62.09 Aligned_cols=80 Identities=15% Similarity=0.089 Sum_probs=71.8
Q ss_pred hhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhH
Q psy15539 81 MGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSV 160 (333)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 160 (333)
.|.....+.+.+|.++++ .++|.++.+++.+..++||.+|++...++.++..+++.+..+.+..++.++.+++..+.
T Consensus 4 mGigRFayTplLP~M~~~---~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~ 80 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQAD---GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSF 80 (85)
T ss_pred hhhHHHHHHhHhHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 355566777889999999 99999999999999999999999999999999888999999999999999999998876
Q ss_pred HHH
Q psy15539 161 IMF 163 (333)
Q Consensus 161 ~~~ 163 (333)
+.+
T Consensus 81 ~~w 83 (85)
T PF06779_consen 81 WLW 83 (85)
T ss_pred HHH
Confidence 544
No 228
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.56 E-value=4.5e-06 Score=73.49 Aligned_cols=117 Identities=16% Similarity=0.079 Sum_probs=92.7
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccc-----hhHHHHH-HHHHHHHHHHHHHHH-----h--------h---
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVG-----RKNTMLL-LAVPTLVGWGLIIWS-----Q--------S--- 159 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~-~~~~~~~~~~~~~~~-----~--------~--- 159 (333)
++++..-.+.+.++..+... ..+.+|+.+|+.+ ||..+++ |.++...+..+..++ . .
T Consensus 10 L~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g 88 (403)
T PF03209_consen 10 LGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLG 88 (403)
T ss_pred hccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHH
Confidence 78888888888888777664 6889999999999 7766554 666666665555442 1 1
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 160 VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 160 ~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.....+...+.|+|.+...+...++++|..|+++|+++.++......+|.+++.++.+.+
T Consensus 89 ~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~l 148 (403)
T PF03209_consen 89 LALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRL 148 (403)
T ss_pred HHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 234556688999999999999999999999999999999998888888988888887765
No 229
>KOG3764|consensus
Probab=98.55 E-value=1.7e-07 Score=81.42 Aligned_cols=154 Identities=14% Similarity=0.126 Sum_probs=117.8
Q ss_pred hhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccc--hhHHHHHHHHHHHHHHHHHHHHh
Q psy15539 81 MGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVG--RKNTMLLLAVPTLVGWGLIIWSQ 158 (333)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~ 158 (333)
........-+.++.+..+ .+..+.-+.|+..--..+.+.++..+.|.++||++ |-.....+.+..++++....+++
T Consensus 282 ~n~~lafLePtlslwm~e--~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~ 359 (464)
T KOG3764|consen 282 SNSSLAFLEPTLSLWMLE--TMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFAT 359 (464)
T ss_pred ccchHHHhCcccHHHHHH--hccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhh
Confidence 334455556666665554 25533337777777788899999999999999999 64455556777777777788899
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCc------chhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHH
Q psy15539 159 SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETE------IRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIIC 228 (333)
Q Consensus 159 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~------~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~ 228 (333)
++..+++-++..|++.+...........+..+.+ ..|...++...++++|..+||.+++++ |..|...+.
T Consensus 360 ~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~ii 439 (464)
T KOG3764|consen 360 SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTII 439 (464)
T ss_pred hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHH
Confidence 9999999999999998888877777777666543 456788899999999999999999988 777777777
Q ss_pred HHHHHHHH
Q psy15539 229 ALLPIFFV 236 (333)
Q Consensus 229 ~~~~~~~~ 236 (333)
++..++..
T Consensus 440 g~~n~iya 447 (464)
T KOG3764|consen 440 GILNLIYA 447 (464)
T ss_pred HHHHHHHH
Confidence 77776643
No 230
>KOG2816|consensus
Probab=98.49 E-value=5.1e-06 Score=75.87 Aligned_cols=127 Identities=26% Similarity=0.341 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhh--hhhhhhhhhhhhhcccCCCc
Q psy15539 115 SMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGF--GGGSFAVVVPMYTAEIAETE 192 (333)
Q Consensus 115 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~--~~g~~~~~~~~~~~e~~~~~ 192 (333)
...+..++.++..|.++||+|||..+.+..+...+..+...+.. +|.++ +.|+ +.+.......+++++....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchh
Confidence 34677889999999999999999999998888888877776655 33322 3333 23456777888999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHH-HHHhhcccCCh
Q psy15539 193 IRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFF-VGLMLLMPESP 246 (333)
Q Consensus 193 ~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~e~~ 246 (333)
.|....++.+..+..+..++|.+++.+ +.-..+.+..+..++. +...+++||+-
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl 203 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESL 203 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccccc
Confidence 999999999999999999999998877 4445666666665554 34455788874
No 231
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.48 E-value=7.5e-06 Score=75.13 Aligned_cols=136 Identities=9% Similarity=-0.096 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccch-hHHHHHHHHHHHHHHHHHHHHhh---------------------HHHHHHHHH
Q psy15539 111 FIGSSMALGAVFGSPVVGNLVDTVGR-KNTMLLLAVPTLVGWGLIIWSQS---------------------VIMFCAGRL 168 (333)
Q Consensus 111 ~~~~~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~ 168 (333)
+....+.+...+.+++..++.+|+|+ |++..++.++.+++.+...+..+ .+..++...
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 33444555556777888899999995 66668888888887777765443 366778889
Q ss_pred HHhhhhhhhhhhhhhhhcccCCCc--chhhHHHHHHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHHHHHH-Hh
Q psy15539 169 LTGFGGGSFAVVVPMYTAEIAETE--IRGTLGTYFQLQCTAGILFVYAVGSWA------SVYGLSIICALLPIFFVG-LM 239 (333)
Q Consensus 169 l~G~~~g~~~~~~~~~~~e~~~~~--~rg~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~ 239 (333)
+.|+..+..+.+.++++++..+++ ..|..+|+.|....+.+++..+..+.+ +-.+.+.+.++.++++.+ ..
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999854 449999999999999999988766554 234566667777766544 45
Q ss_pred hcccCCh
Q psy15539 240 LLMPESP 246 (333)
Q Consensus 240 ~~~~e~~ 246 (333)
+.+|.++
T Consensus 469 ~~~~~~~ 475 (477)
T TIGR01301 469 ILLPRPR 475 (477)
T ss_pred HhCCCCC
Confidence 5667654
No 232
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.47 E-value=1e-05 Score=62.44 Aligned_cols=114 Identities=12% Similarity=0.107 Sum_probs=92.1
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhh
Q psy15539 104 VTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPM 183 (333)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~ 183 (333)
+++..--.-.++.+....+++++.+.+.+++|.|+.+++|.+...+..... +-++.+.++.+-.+.|++.+..++....
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ 112 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGT 112 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhH
Confidence 333333344566777788899999999999999999999999988665554 4567788999999999999999999999
Q ss_pred hhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHH
Q psy15539 184 YTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSW 218 (333)
Q Consensus 184 ~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~ 218 (333)
++.+...++.|++..+++-.....+.++|.++...
T Consensus 113 ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 113 YLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988777777777777655443
No 233
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.41 E-value=2.3e-06 Score=78.13 Aligned_cols=147 Identities=22% Similarity=0.192 Sum_probs=107.2
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhcc-----chhHHHHHHHHHHHHHHHHHHHH----hhHHH
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTV-----GRKNTMLLLAVPTLVGWGLIIWS----QSVIM 162 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-----Grr~~l~~~~~~~~~~~~~~~~~----~~~~~ 162 (333)
.|.+.++ +|.++++...+.+...+.. ...++.|.++|-+ .||+-++++.++.+++.+.++.. .+...
T Consensus 13 ~~~l~~~---l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 13 YPFLKDD---LGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHH---cCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 4556666 9999999888877777665 4567789999976 35666677777776666655553 24556
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccC--CCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHH
Q psy15539 163 FCAGRLLTGFGGGSFAVVVPMYTAEIA--ETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIFFV 236 (333)
Q Consensus 163 ~~~~~~l~G~~~g~~~~~~~~~~~e~~--~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 236 (333)
..++-++..+|........-+.+.|.. .++.||...+.......+|.+++..+++.+ +++..|.+.+++..+..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 666778888899999999999999986 233478888888888888999888887766 66777777776666654
Q ss_pred HHhhcc
Q psy15539 237 GLMLLM 242 (333)
Q Consensus 237 ~~~~~~ 242 (333)
+..+++
T Consensus 169 ~~~~~~ 174 (433)
T PF03092_consen 169 IVALFL 174 (433)
T ss_pred HHHHHh
Confidence 444433
No 234
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.40 E-value=2.7e-05 Score=70.89 Aligned_cols=126 Identities=15% Similarity=0.189 Sum_probs=80.2
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH-----HhhHHHHHH
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW-----SQSVIMFCA 165 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~ 165 (333)
..|.+.++ .+|.+..+.++.......+..++..+.+.+.++.++++.+.....+..++.++... .+++...++
T Consensus 240 ~~P~~l~~--~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~ 317 (413)
T PRK15403 240 VSPVILID--AGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVL 317 (413)
T ss_pred hChHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHH
Confidence 45666665 26899999999888888888888888888765544444433333333333222221 223334566
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 166 GRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 166 ~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
..++.++|.+...+......-. -....+|++.++.+.....+...++..++++
T Consensus 318 ~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~ 370 (413)
T PRK15403 318 GTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWL 370 (413)
T ss_pred HHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888888877776643321 1222478888888877777777777777666
No 235
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.34 E-value=1.2e-05 Score=70.32 Aligned_cols=131 Identities=9% Similarity=0.018 Sum_probs=102.8
Q ss_pred hhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHH
Q psy15539 84 ILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMF 163 (333)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 163 (333)
........++.+..+ ..|.+..+.....+.+..+.++|.++..++..|+-..|.+.+..++..+.++..+++++...
T Consensus 251 ~Eva~gsfl~~y~~~--~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~- 327 (422)
T COG0738 251 AEVAIGSFLVSYLEE--LLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVA- 327 (422)
T ss_pred HHHHHHHHHHHHHHh--cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHH-
Confidence 334444556667666 27788889999999999999999999999999999999999999888888888888888544
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 164 CAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 164 ~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+.+-++.|+..+..+|...+...+..| +. ....|..-....+|+.+.|.+.+++
T Consensus 328 ~~~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i 381 (422)
T COG0738 328 LYALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVI 381 (422)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHH
Confidence 445567888899999999999999888 33 3334444455567888888888877
No 236
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.32 E-value=2.5e-06 Score=57.43 Aligned_cols=64 Identities=19% Similarity=0.250 Sum_probs=54.4
Q ss_pred hhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy15539 81 MGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPT 147 (333)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 147 (333)
.....+...|.+|.+.++ .|++..+.|.+.++..+...++.+++|.++||+|+++.++....++
T Consensus 12 ~f~~~g~~~Pfl~~~~~~---~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 12 YFAALGCLYPFLPLYLKQ---LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHhhhhHhhhh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 333455666778888888 9999999999999999999999999999999999999887765543
No 237
>KOG0255|consensus
Probab=98.31 E-value=3.6e-05 Score=72.39 Aligned_cols=137 Identities=20% Similarity=0.144 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHH---HHHHHHHHHhhhhhhhhhhhhhhhcc
Q psy15539 111 FIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVI---MFCAGRLLTGFGGGSFAVVVPMYTAE 187 (333)
Q Consensus 111 ~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~G~~~g~~~~~~~~~~~e 187 (333)
...+........+....+.+.|++|||.....+.++..+++++.++..... ...+...+..++.+..+.....+.+|
T Consensus 354 ~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 433 (521)
T KOG0255|consen 354 LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAE 433 (521)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444445666666778999999999999999999999999988865433 35555566666666677777899999
Q ss_pred cCCCcchhhHHHHHHHHHHHHHHHHHHHhHHHHH--H-HHHHHHHHHHHH-HHHHhhcccCChH
Q psy15539 188 IAETEIRGTLGTYFQLQCTAGILFVYAVGSWASV--Y-GLSIICALLPIF-FVGLMLLMPESPQ 247 (333)
Q Consensus 188 ~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~--~-~~~~~~~~~~~~-~~~~~~~~~e~~~ 247 (333)
.+|+..|..+.+.......+|.+++|.+...... . ..+.+.+..+.+ ..+..+++||+..
T Consensus 434 l~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 434 LIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccCC
Confidence 9999999999999999999999999988765521 1 122223444444 4445578999854
No 238
>KOG2533|consensus
Probab=98.19 E-value=2.6e-05 Score=71.84 Aligned_cols=140 Identities=10% Similarity=-0.013 Sum_probs=91.7
Q ss_pred HHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhc----cchhHHHHHHHHHHHH
Q psy15539 74 ATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDT----VGRKNTMLLLAVPTLV 149 (333)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~Grr~~l~~~~~~~~~ 149 (333)
..+..+......+.+...+|.+.++ ..|.+..+.+.+.+.+.++.+++.+++|+++|| ..+|..+.....+..+
T Consensus 278 ~~l~~~~~~lv~~~~~~~lpl~l~~--~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~ 355 (495)
T KOG2533|consen 278 FSLCYFFLKLVNYGFSYWLPLYLKS--NGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAI 355 (495)
T ss_pred HHHHHHHHhhccccHHHHHHHHHHc--CCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 3344444444444555667878776 467899999999999999999999999999999 6777776666655554
Q ss_pred HH-HHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcch-hhHHHHHHHHHHHHHHHHHHH
Q psy15539 150 GW-GLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIR-GTLGTYFQLQCTAGILFVYAV 215 (333)
Q Consensus 150 ~~-~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~r-g~~~~~~~~~~~~g~~~~~~~ 215 (333)
.. +......+......+.+..+.+.+...+......++......| -...+....+.+.+.++++.+
T Consensus 356 ~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~ 423 (495)
T KOG2533|consen 356 IGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQL 423 (495)
T ss_pred HHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhh
Confidence 44 4444443344444444444455666667777777777655544 344445566666666665555
No 239
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.19 E-value=0.00041 Score=63.58 Aligned_cols=113 Identities=10% Similarity=0.131 Sum_probs=81.2
Q ss_pred hhHHHHHHHHHHHHHHH-HHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH--h-------------------------
Q psy15539 107 SDLSFIGSSMALGAVFG-SPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS--Q------------------------- 158 (333)
Q Consensus 107 ~~~~~~~~~~~~~~~i~-~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~------------------------- 158 (333)
+...++-+...+...+. .++.+++++|++|++++-+......+..+++++. +
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~ 122 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGF 122 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHH
Confidence 56788877776666555 8889999999999999887666666555554442 0
Q ss_pred ----hHHHHHHHHHHHhhhhhhhhh-hhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 159 ----SVIMFCAGRLLTGFGGGSFAV-VVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 159 ----~~~~~~~~~~l~G~~~g~~~~-~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+.|...+......+-.....+ ..+.+++|.+..++-.+..++...+.++|.++++.+..++
T Consensus 123 i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 123 IAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222333333333333444 7788999999999999999999999999999999887665
No 240
>KOG0637|consensus
Probab=98.15 E-value=3.5e-06 Score=74.67 Aligned_cols=129 Identities=21% Similarity=0.297 Sum_probs=98.7
Q ss_pred hhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhh----ccchhHHHHH-HHHHHHHHHHHHHHHhh------
Q psy15539 91 AGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVD----TVGRKNTMLL-LAVPTLVGWGLIIWSQS------ 159 (333)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----r~Grr~~l~~-~~~~~~~~~~~~~~~~~------ 159 (333)
+.+.+..+ .|++....+.+--..-+...+.+++.|..+| ||||||.++. +.+..+++.++..++.+
T Consensus 54 y~tPyl~~---lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lg 130 (498)
T KOG0637|consen 54 YLTPYLQS---LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLG 130 (498)
T ss_pred cccHHHHH---cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhc
Confidence 35556666 8888887777766667777889999999999 6899887765 56666777777776543
Q ss_pred -----------HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhh-HHHHHHHHHHHHHHHHHHHhHHHHHH
Q psy15539 160 -----------VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGT-LGTYFQLQCTAGILFVYAVGSWASVY 222 (333)
Q Consensus 160 -----------~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~-~~~~~~~~~~~g~~~~~~~~~~~~~~ 222 (333)
...++++.-+.-++....+...-+++.|...++++.+ +.+.+....++|+.+|..++++.+|+
T Consensus 131 d~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~~~ 205 (498)
T KOG0637|consen 131 DNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLGLY 205 (498)
T ss_pred CCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccCce
Confidence 2345555556666777788889999999987777767 99999999999999999888777543
No 241
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.03 E-value=0.00042 Score=64.07 Aligned_cols=111 Identities=14% Similarity=0.124 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccch--hH-----HHHHHHHHHHHHHHHHHHH---------hhHHHHHHHHHHHhh
Q psy15539 109 LSFIGSSMALGAVFGSPVVGNLVDTVGR--KN-----TMLLLAVPTLVGWGLIIWS---------QSVIMFCAGRLLTGF 172 (333)
Q Consensus 109 ~~~~~~~~~~~~~i~~~~~g~l~dr~Gr--r~-----~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~G~ 172 (333)
.+|..++..+.-++.+|+.+++=.|.+| |. =+.+|+++.+++.+.+.++ .+.+++++.-++.++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 5677777777778888887777666633 21 1667888888887666442 256778888999999
Q ss_pred hhhhhhhhhhhhhcccCCCcchhhHHHHHHH-HHHHHHHHHHHHhHHH
Q psy15539 173 GGGSFAVVVPMYTAEIAETEIRGTLGTYFQL-QCTAGILFVYAVGSWA 219 (333)
Q Consensus 173 ~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~-~~~~g~~~~~~~~~~~ 219 (333)
|+-...|+..+.+++..|++.||+.+|.+.. ...+|..++..++...
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999866 3467777766665433
No 242
>KOG2615|consensus
Probab=98.03 E-value=0.00011 Score=64.00 Aligned_cols=119 Identities=13% Similarity=0.104 Sum_probs=103.4
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccc--hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhh
Q psy15539 101 PFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVG--RKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFA 178 (333)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~ 178 (333)
.+|.++.+.|-+.+...++..+.+....+..||.. -+-.+..+..++.-..++...+.....+.++-.+..+..+...
T Consensus 291 rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~v 370 (451)
T KOG2615|consen 291 RFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVV 370 (451)
T ss_pred ccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhh
Confidence 48999999999999999999998888888888887 6677777777777777777778888888888888888888888
Q ss_pred hhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 179 VVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 179 ~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+....++....|.++||...|+.....+++-.+||.+++.+
T Consensus 371 t~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i 411 (451)
T KOG2615|consen 371 TCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVI 411 (451)
T ss_pred HHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhhee
Confidence 88888999999999999999999999999999999998655
No 243
>PTZ00207 hypothetical protein; Provisional
Probab=98.00 E-value=0.00019 Score=67.63 Aligned_cols=126 Identities=10% Similarity=0.037 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc---------cchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhh
Q psy15539 112 IGSSMALGAVFGSPVVGNLVDT---------VGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVP 182 (333)
Q Consensus 112 ~~~~~~~~~~i~~~~~g~l~dr---------~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~ 182 (333)
+.+++.+++++|.+..|++... +.|--.+.+..+ +.++.+++++......+++..++.|++.|..+++..
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~ 474 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIA 474 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHH
Confidence 6788888888888888887722 222222333334 666666666654446899999999999999999999
Q ss_pred hhhcccCCCcchhhHHHHHHHHHHHHHHHH-HHHhHHH-----------------HHHHHHHHHHHHHHHHHHHh
Q psy15539 183 MYTAEIAETEIRGTLGTYFQLQCTAGILFV-YAVGSWA-----------------SVYGLSIICALLPIFFVGLM 239 (333)
Q Consensus 183 ~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~-~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~ 239 (333)
..++|+|. +.-|+-..+......+|+.+- ..+.+.+ =.+..|++.+.+++++.+..
T Consensus 475 ~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s 548 (591)
T PTZ00207 475 LVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITS 548 (591)
T ss_pred HHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHH
Confidence 99999999 888888888888888887775 2333322 14567888877777655443
No 244
>KOG2816|consensus
Probab=97.89 E-value=0.00053 Score=62.87 Aligned_cols=118 Identities=12% Similarity=0.084 Sum_probs=103.8
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHH-HhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhh
Q psy15539 101 PFLVTESDLSFIGSSMALGAVFGSPVVG-NLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAV 179 (333)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g-~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~ 179 (333)
.++++..+.+.+.+...+...+++.+.. .+...+|-|+++.+|++.-.+...+.+++++.|+++....+.++. +...+
T Consensus 271 ~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~~~~p 349 (463)
T KOG2816|consen 271 KFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-GIVFP 349 (463)
T ss_pred ecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-cchhH
Confidence 4899999999998888888888888776 788899999999999999999999999999999988888777765 45778
Q ss_pred hhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 180 VVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 180 ~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
...+.++-+..++++|+..++.....++..+++|.+-+.+
T Consensus 350 a~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 350 AIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred HHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 8889999999999999999999999999998888886554
No 245
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.86 E-value=0.00072 Score=60.32 Aligned_cols=110 Identities=15% Similarity=0.082 Sum_probs=79.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH--HHHHH---HHHHHhhHHHHHHHHHHHhhhhhhhhhh
Q psy15539 106 ESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPT--LVGWG---LIIWSQSVIMFCAGRLLTGFGGGSFAVV 180 (333)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~l~G~~~g~~~~~ 180 (333)
..+..+....+.+|-+++.--...+ |+ |++.+.+.+-. .+..+ +.-+.++.+..++.-+..|+..|..+.-
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVN 355 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVN 355 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHH
Confidence 4577888888888877765432221 33 33333322222 12212 2223578888888999999999999999
Q ss_pred hhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 181 VPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 181 ~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
....+.|-.++++|..++|....+-++|.+++..++-++
T Consensus 356 tF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 356 TFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998887665
No 246
>KOG3574|consensus
Probab=97.78 E-value=0.0013 Score=57.51 Aligned_cols=139 Identities=17% Similarity=0.098 Sum_probs=90.8
Q ss_pred HHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhh-----ccchhHHHHH-HH
Q psy15539 71 ALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVD-----TVGRKNTMLL-LA 144 (333)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-----r~Grr~~l~~-~~ 144 (333)
+..+.+.+...|...+... .+|.+.+. -|.|-++.+....++ .-..--+++.++.| |+||||.-++ +.
T Consensus 33 illLl~LYllQGiP~GL~~-~iP~lL~a---k~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q 106 (510)
T KOG3574|consen 33 ILLLLFLYLLQGIPLGLIG-AIPLLLQA---KGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQ 106 (510)
T ss_pred HHHHHHHHHHcCCchhHhh-hhHHHhcC---CCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHhhccccceeeehH
Confidence 4445555667788777777 78988887 777777766544332 22344567778888 9999987544 44
Q ss_pred HHHHHHHHHHHHH-----------hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHH
Q psy15539 145 VPTLVGWGLIIWS-----------QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVY 213 (333)
Q Consensus 145 ~~~~~~~~~~~~~-----------~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~ 213 (333)
.+.+..+.+.+.. ++...+....++.-+..+......-.+.-.+..+++-|.+......+...|..++.
T Consensus 107 ~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 107 YLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGN 186 (510)
T ss_pred HHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhc
Confidence 4444444444431 23444444556666666666666666777777788888888877777777777766
Q ss_pred HH
Q psy15539 214 AV 215 (333)
Q Consensus 214 ~~ 215 (333)
.+
T Consensus 187 ~i 188 (510)
T KOG3574|consen 187 VV 188 (510)
T ss_pred ce
Confidence 55
No 247
>KOG3098|consensus
Probab=97.75 E-value=0.0019 Score=58.65 Aligned_cols=102 Identities=11% Similarity=-0.007 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCc
Q psy15539 113 GSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETE 192 (333)
Q Consensus 113 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~ 192 (333)
.++.+..+.+.+++.+.+.|+.|.|..++++........+...+ .|-+.+++...+.|+|.+..+..-..|++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 77888899999999999999999999999999988887766555 45677889999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHH
Q psy15539 193 IRGTLGTYFQLQCTAGILFVYAV 215 (333)
Q Consensus 193 ~rg~~~~~~~~~~~~g~~~~~~~ 215 (333)
.+.+..++.-.....+.++|..+
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGII 157 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHh
Confidence 99999988666666666666554
No 248
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.64 E-value=0.0014 Score=59.42 Aligned_cols=129 Identities=16% Similarity=0.049 Sum_probs=98.6
Q ss_pred chhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH---H---h---
Q psy15539 88 TSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW---S---Q--- 158 (333)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~---~--- 158 (333)
.+..+..|... .|+++...|.+-+...+..+.+.++..++.+|+|..+.=+++.....++..++.. . +
T Consensus 277 f~~lmt~yl~~---~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~ 353 (432)
T PF06963_consen 277 FGGLMTAYLKS---QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSS 353 (432)
T ss_pred CcHHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchh
Confidence 45567778777 7999999999999999999999999999999999988877776665544444332 1 1
Q ss_pred -hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 159 -SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 159 -~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+...++.+-.+.-+|.=+......-++.|..|+++||...|.-.....+..++...+.-..
T Consensus 354 ~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 354 ISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3444555555666676677777888899999999999999998887777777666554433
No 249
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.61 E-value=0.0034 Score=55.75 Aligned_cols=105 Identities=10% Similarity=0.127 Sum_probs=76.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH-HHHHHHHHHHHHHHHhh---HHHHHHHHHHHhhhhhhhhhhhh
Q psy15539 107 SDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLL-LAVPTLVGWGLIIWSQS---VIMFCAGRLLTGFGGGSFAVVVP 182 (333)
Q Consensus 107 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~l~G~~~g~~~~~~~ 182 (333)
+..+...++..+..++.+|+.|.++|+.|+||..+. ...+..++.+++.+.++ ++..+++..+..++..+......
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 345777788888889999999999999998776554 55556666667776654 44455557778888888888899
Q ss_pred hhhcccCCCcchhhHHHHHHHHHHHHHHH
Q psy15539 183 MYTAEIAETEIRGTLGTYFQLQCTAGILF 211 (333)
Q Consensus 183 ~~~~e~~~~~~rg~~~~~~~~~~~~g~~~ 211 (333)
+++.+..++++-++..++.....-+|+++
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i 166 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVI 166 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchH
Confidence 99999999888777766633333334443
No 250
>KOG4332|consensus
Probab=97.42 E-value=0.00069 Score=56.34 Aligned_cols=84 Identities=20% Similarity=0.231 Sum_probs=64.3
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHHhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW---SQSVIMFCAGRLLTGFGGGSFA 178 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~G~~~g~~~ 178 (333)
+|....+++.+........++.+.+.|-++||-|||+.- +.+++..+++.. ++.+..++++|.+.|+..+..+
T Consensus 67 YgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKrac----vtycitYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLF 142 (454)
T KOG4332|consen 67 YGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC----VTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLF 142 (454)
T ss_pred cCccCCccceeeecccchHHHHHHHHHHHHhhhccccce----eeehHHHHHHHHhhcCCceEEEeehhhhhhHHHHHHH
Confidence 777777888877777777788888999999999999953 334444444443 4678889999999999998888
Q ss_pred hhhhhh-hcccC
Q psy15539 179 VVVPMY-TAEIA 189 (333)
Q Consensus 179 ~~~~~~-~~e~~ 189 (333)
...-++ ++|.-
T Consensus 143 SaFEsWliaEHn 154 (454)
T KOG4332|consen 143 SAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHhh
Confidence 777666 46654
No 251
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.39 E-value=0.0012 Score=59.00 Aligned_cols=128 Identities=15% Similarity=0.052 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccC
Q psy15539 110 SFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIA 189 (333)
Q Consensus 110 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~ 189 (333)
+.+.-+-.+-..+..+++.++.+|+..+.=+.+..++.+++.++.+++++.+.-+++-.+.+++.|........+.+ .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 33444444566677778888999988666666777788888888899999988888899999988877777666644 55
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHhHHH-----HHHHHHHHHHHHHHHHHHHhhcc
Q psy15539 190 ETEIRGTLGTYFQLQCTAGILFVYAVGSWA-----SVYGLSIICALLPIFFVGLMLLM 242 (333)
Q Consensus 190 ~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
++ ...+.+..|.+.++++|+..-..+ ..|..+++...+.++.++.++++
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 53 356667777777777776654333 34566666666666555555543
No 252
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.35 E-value=0.012 Score=53.58 Aligned_cols=128 Identities=16% Similarity=0.142 Sum_probs=98.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccchh-------HHHHHHHHHHHHHHHHHHHH----------hhHHHHHHHHHHH
Q psy15539 108 DLSFIGSSMALGAVFGSPVVGNLVDTVGRK-------NTMLLLAVPTLVGWGLIIWS----------QSVIMFCAGRLLT 170 (333)
Q Consensus 108 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr-------~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~ 170 (333)
...+..+...+.-++.+++..++-.+.+++ .=+-++.++++.+.+++... .+.++++...+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 456778888888888888888888885554 12455666666666655443 2678899999999
Q ss_pred hhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHH-------H---HHHHHHHHHHHHHHHH
Q psy15539 171 GFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSW-------A---SVYGLSIICALLPIFF 235 (333)
Q Consensus 171 G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~-------~---~~~~~~~~~~~~~~~~ 235 (333)
++|.=+..|+..+++....|+...+..++.+..+...|+.++..++.. . .....|+.++...++.
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~ 479 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVI 479 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988877762 2 3445566666555543
No 253
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.35 E-value=0.0019 Score=57.96 Aligned_cols=105 Identities=20% Similarity=0.221 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHh---------hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCc---chhhHHHHHHHHH
Q psy15539 138 NTMLLLAVPTLVGWGLIIWSQ---------SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETE---IRGTLGTYFQLQC 205 (333)
Q Consensus 138 ~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~---~rg~~~~~~~~~~ 205 (333)
|.++++.+++.+|.+++.++. +...++++-++.++|.|+.-+...++++|.++++ +|.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888999999988855542 2357888888999999999999999999999765 4566777889999
Q ss_pred HHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhhcc
Q psy15539 206 TAGILFVYAVGSWA----SVYGLSIICALLPIFFVGLMLLM 242 (333)
Q Consensus 206 ~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
.+|..++..+..++ +|.+.|.+.++..+++++.++.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999998887 79999999888887776666543
No 254
>KOG3098|consensus
Probab=97.35 E-value=0.027 Score=51.40 Aligned_cols=109 Identities=22% Similarity=0.278 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh---ccchhHHHHHHHHHHHHHHHHHHHH------------------hhHHHHHHHHH
Q psy15539 110 SFIGSSMALGAVFGSPVVGNLVD---TVGRKNTMLLLAVPTLVGWGLIIWS------------------QSVIMFCAGRL 168 (333)
Q Consensus 110 ~~~~~~~~~~~~i~~~~~g~l~d---r~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 168 (333)
+...-...+|..+++.+.+.+.+ ++||++.+.++.++..++.++.... ++.....+..+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 44444556666777777777775 6888999999888888877776542 23567778889
Q ss_pred HHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 169 LTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 169 l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+.|++-+......+.++.... ++.|..+.+++-.-.+++..++.......
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999998898999999988 67788888887777777776655554443
No 255
>PRK03612 spermidine synthase; Provisional
Probab=97.28 E-value=0.029 Score=52.63 Aligned_cols=117 Identities=12% Similarity=-0.033 Sum_probs=65.3
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH-HHHHH-HHHHHHHHHH----h-hHHHHHHHHHHHhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLL-LAVPT-LVGWGLIIWS----Q-SVIMFCAGRLLTGFGG 174 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~-~~~~~~~~~~----~-~~~~~~~~~~l~G~~~ 174 (333)
+|.+....+.+.+++.+|..+|+.+++++.++.-++...+- +..+. .++..+.... . ....++...++.++..
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLI 124 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777888999999999999999999888744333322111 11111 1111111111 1 1122334455677778
Q ss_pred hhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 175 GSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 175 g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
|+..|....+..+... +.-|...|-......+|+++|.++.+++
T Consensus 125 G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 125 GMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred HHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHH
Confidence 8887776666654322 1224455555566666666666665544
No 256
>KOG3810|consensus
Probab=97.27 E-value=0.0011 Score=57.05 Aligned_cols=201 Identities=16% Similarity=0.121 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchh
Q psy15539 116 MALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRG 195 (333)
Q Consensus 116 ~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg 195 (333)
..-.+.+.-++.=.+.|....|+++++-.+...+...+..+.++.+.+-+.-++.|...+ .....++++-+..+++.+-
T Consensus 51 wTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yq 129 (433)
T KOG3810|consen 51 WTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYK 129 (433)
T ss_pred hhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHH
Confidence 344555666666678999999999998888888888888889999999999999998876 3456788888889999998
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCC
Q psy15539 196 TLGTYFQLQCTAGILFVYAVGSWA------SVYGLSIICALLPIFFVGLMLLMPESPQFHLKKNRVKQAKESLQWFRGSE 269 (333)
Q Consensus 196 ~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (333)
++.+..-...-.|-..+..++..+ ++...-++......+..+..+++|..++...-+.+.+ +....+....+
T Consensus 130 rvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~--~~~v~~~e~~~ 207 (433)
T KOG3810|consen 130 RVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLED--KISVGDLEEMN 207 (433)
T ss_pred HHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccc--cceeccchhcC
Confidence 888887766666666666665554 3444444544444555666677777664332221111 11111111000
Q ss_pred cchHHHHHH-HHHHHHhhccCccchHhhhcChhhHHHHHHHHHHHHHHhhcchhhhhhchh
Q psy15539 270 YDIDSEITD-MQNSLEKERSDKVPLMQAFSTPAAKRGLLIGLGVMFIQQFGGINAVVFYTV 329 (333)
Q Consensus 270 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 329 (333)
. +.+..+ ++.. -..-...+.+..++| -++-+-+|.....||++-+.+|.-
T Consensus 208 ~--~~~~~~~l~~~---~~~l~~~l~~~y~np-----~ll~WSlWwAl~scg~~QV~nY~Q 258 (433)
T KOG3810|consen 208 P--QASYMSYLRGA---FVLLWRDLQECYSNP-----RLLKWSLWWALASCGYYQVTNYTQ 258 (433)
T ss_pred c--cchhhHHHHHH---HHHHHHHHHHHhcCc-----hhhhhHHHHHHhhchhHHHHHHHH
Confidence 0 000000 0000 000112234455555 366677888888899988888854
No 257
>KOG1237|consensus
Probab=97.21 E-value=0.01 Score=56.00 Aligned_cols=148 Identities=14% Similarity=0.108 Sum_probs=107.4
Q ss_pred hhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHHHHHHHHHhh---------
Q psy15539 90 PAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDT-VGRKNTMLLLAVPTLVGWGLIIWSQS--------- 159 (333)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~--------- 159 (333)
..+..+..+ ++.+...+.-..+.+.-......++.++++|- +||-+.+.++.++..++.++..+...
T Consensus 59 nlv~ylt~~---~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~ 135 (571)
T KOG1237|consen 59 NLVTYLTLE---LHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMC 135 (571)
T ss_pred HHHHHHHHH---hccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Confidence 334444444 77777777777888888888888999999995 68888888888888888665544211
Q ss_pred ----------------HHHHHHHHHHHhhhhhhhhhhhhhhhcccCC---Ccc-hh--hHHHHHHHHHHHHHHHHHHHhH
Q psy15539 160 ----------------VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAE---TEI-RG--TLGTYFQLQCTAGILFVYAVGS 217 (333)
Q Consensus 160 ----------------~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~---~~~-rg--~~~~~~~~~~~~g~~~~~~~~~ 217 (333)
...++....+..+|.|+.-+...++-+|-++ +++ +. ..+.++.....+|.+++..+..
T Consensus 136 ~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~v 215 (571)
T KOG1237|consen 136 KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLV 215 (571)
T ss_pred cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHH
Confidence 1355566677778999999999999999998 322 22 4667778888888888877766
Q ss_pred HH----HHHHHHHHHHHHHHHHHHHhh
Q psy15539 218 WA----SVYGLSIICALLPIFFVGLML 240 (333)
Q Consensus 218 ~~----~~~~~~~~~~~~~~~~~~~~~ 240 (333)
+. +|.+.|.+..+..++++++++
T Consensus 216 yiq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 216 YIQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred hhhhcccceeeccHHHHHHHHHHHHHH
Confidence 66 888888877777666555444
No 258
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.11 E-value=0.0034 Score=57.55 Aligned_cols=144 Identities=10% Similarity=0.161 Sum_probs=100.5
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH----------HhhHHHHHHHHHHHhh
Q psy15539 103 LVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW----------SQSVIMFCAGRLLTGF 172 (333)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~G~ 172 (333)
+.++...+.+..+..++.++|..+...+.-+..-|+++..+.++.++..+.-.. .++.+..+.--++..+
T Consensus 251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~ 330 (433)
T PF03092_consen 251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEV 330 (433)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHH
Confidence 378888898888888999999999988888888899988888777666554221 1122222233455555
Q ss_pred hhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH------------HHHHHHHHHHHHHHHHHHHhh
Q psy15539 173 GGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA------------SVYGLSIICALLPIFFVGLML 240 (333)
Q Consensus 173 ~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 240 (333)
..+..+-.....++|++|+..-|+..++......+|..++..++..+ +-.+..+++.++.++.+....
T Consensus 331 ~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~ 410 (433)
T PF03092_consen 331 IGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLF 410 (433)
T ss_pred HHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 55666666777899999999999999988888888888777777665 123445555555555555555
Q ss_pred cccCCh
Q psy15539 241 LMPESP 246 (333)
Q Consensus 241 ~~~e~~ 246 (333)
++|+..
T Consensus 411 lLp~~~ 416 (433)
T PF03092_consen 411 LLPPQK 416 (433)
T ss_pred HcCCCc
Confidence 677643
No 259
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.09 E-value=0.15 Score=47.36 Aligned_cols=115 Identities=16% Similarity=0.205 Sum_probs=72.3
Q ss_pred CchhHHHHHHHHHH-HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH--h-----------------------
Q psy15539 105 TESDLSFIGSSMAL-GAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS--Q----------------------- 158 (333)
Q Consensus 105 ~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~----------------------- 158 (333)
.++....+-....+ +.++...+..+++++++|.+++-+..........++++. +
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 34455555443333 556667788999999999998776555555444444331 0
Q ss_pred ------hHHHHHHHHHHHhhhhhhhhh-hhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 159 ------SVIMFCAGRLLTGFGGGSFAV-VVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 159 ------~~~~~~~~~~l~G~~~g~~~~-~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+.|.+.+..+..-+-.....+ ..+.+.+|.++.++-.+..+++..+..+|.+++..+..+.
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012222222222221122222 4688999999999999999999999999999887776555
No 260
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.05 E-value=0.0045 Score=56.22 Aligned_cols=142 Identities=14% Similarity=0.124 Sum_probs=73.6
Q ss_pred HHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHH--HHHHHHHHHHHH-HHhhhccchhHHHHH-HHHHHH
Q psy15539 73 TATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSS--MALGAVFGSPVV-GNLVDTVGRKNTMLL-LAVPTL 148 (333)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~-g~l~dr~Grr~~l~~-~~~~~~ 148 (333)
++.+.+++.|...+.....+|.++++. .-+.+-++.+..+-+ .+=--.+.+|+. .....|+||||.-++ .=.+.+
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~-~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g 82 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSM-AKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSG 82 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccc-cCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHH
Confidence 345566777877777666677776640 124454555543222 111112233322 445559999987554 223333
Q ss_pred HHHHHHHHHh------------------------hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHH
Q psy15539 149 VGWGLIIWSQ------------------------SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQ 204 (333)
Q Consensus 149 ~~~~~~~~~~------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~ 204 (333)
+..+..+... +...+....+++=+..+-....+-.+.-.+..++.++.+......|
T Consensus 83 ~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG 162 (544)
T PF13000_consen 83 ILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVG 162 (544)
T ss_pred HHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhH
Confidence 3333322211 1112333333333334444444445555666778888888877777
Q ss_pred HHHHHHHHHHH
Q psy15539 205 CTAGILFVYAV 215 (333)
Q Consensus 205 ~~~g~~~~~~~ 215 (333)
..+|..++..+
T Consensus 163 ~~~Gyfls~tv 173 (544)
T PF13000_consen 163 QTAGYFLSFTV 173 (544)
T ss_pred hhhhHHHHHHH
Confidence 77777766555
No 261
>KOG3762|consensus
Probab=96.83 E-value=0.00063 Score=61.99 Aligned_cols=81 Identities=15% Similarity=0.215 Sum_probs=64.1
Q ss_pred HHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHH-HHHHHHHH
Q psy15539 74 ATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLA-VPTLVGWG 152 (333)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~-~~~~~~~~ 152 (333)
+=+..+..+...+.+.+.++.+.++ +|+++.+.|.++..--+..+++.|++|+++||+.+||.++++. +..+.+.+
T Consensus 16 ~k~f~~~~~~~~g~l~pll~vy~kQ---LGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~f 92 (618)
T KOG3762|consen 16 AKLFYLFFGARFGSLFPLLAVYFKQ---LGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATF 92 (618)
T ss_pred eeeeeeeeeecccccchHHHHHHHH---cCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 3344445555667777888889888 9999999999999999999999999999999999887777655 45555666
Q ss_pred HHHHH
Q psy15539 153 LIIWS 157 (333)
Q Consensus 153 ~~~~~ 157 (333)
++.+.
T Consensus 93 ll~fv 97 (618)
T KOG3762|consen 93 LLVFV 97 (618)
T ss_pred heeec
Confidence 66554
No 262
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.83 E-value=0.38 Score=43.99 Aligned_cols=113 Identities=19% Similarity=0.215 Sum_probs=77.9
Q ss_pred CchhHHHHHHHHHH-HHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH---------hh---------------
Q psy15539 105 TESDLSFIGSSMAL-GAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS---------QS--------------- 159 (333)
Q Consensus 105 ~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~--------------- 159 (333)
.++...++-+..-+ +.++..++..++.+++.|.+++-+.........+++++. ++
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 34556666666655 677888899999999999999877666666665555542 01
Q ss_pred -----------HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 160 -----------VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 160 -----------~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
...++++.=+.|-- ...-..+.+..|.+..++-.+..++++.+..++..++..+..+.
T Consensus 139 ~~~ili~~~Ws~s~~Yi~aELWgsl--V~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 139 KWFILIVGEWSYSLFYIMAELWGSL--VLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred eeeeEeecchHHHHHHHHHHHHHHH--HHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222222222211 11225677889999999999999999999999999988887776
No 263
>KOG2563|consensus
Probab=96.82 E-value=0.008 Score=53.88 Aligned_cols=103 Identities=19% Similarity=0.221 Sum_probs=69.6
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhH-HHHHHHHHHHHHHHHHH-HH---hhHHHHHHHHHHHhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKN-TMLLLAVPTLVGWGLII-WS---QSVIMFCAGRLLTGFGGGS 176 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~l~G~~~g~ 176 (333)
.|.+....|++.....++.++++.++|.+.||...-+ .+++......++..... +. ...+.++..-.+.|++..+
T Consensus 296 sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~ 375 (480)
T KOG2563|consen 296 SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTG 375 (480)
T ss_pred ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcC
Confidence 5666688999999999999999999999999976533 34444444444422211 11 1334455556677888888
Q ss_pred hhhhhhhhhcccCCCcchhhHHHHHHHH
Q psy15539 177 FAVVVPMYTAEIAETEIRGTLGTYFQLQ 204 (333)
Q Consensus 177 ~~~~~~~~~~e~~~~~~rg~~~~~~~~~ 204 (333)
.+|+..-+..|..-|..-+...|+.++.
T Consensus 376 ~~Pig~ElgvE~TyPv~E~tSsGll~~~ 403 (480)
T KOG2563|consen 376 YLPIGFELGVETTYPVAEGTSSGLLNLS 403 (480)
T ss_pred CCCcceeeeeeeccccCCcccceeEEee
Confidence 8999999999985444445666664443
No 264
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.31 E-value=0.22 Score=45.65 Aligned_cols=59 Identities=15% Similarity=0.192 Sum_probs=49.4
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHh
Q psy15539 158 QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVG 216 (333)
Q Consensus 158 ~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~ 216 (333)
++-+..++.-++.|+..|-..+....+..+..++++|..+..+......+|..+|..++
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667778899999999999999999999999999999888888888888877776654
No 265
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.18 E-value=0.15 Score=46.79 Aligned_cols=96 Identities=8% Similarity=-0.070 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH-HHHHHH-------HhhHHHHHHHHHHHhhhhhhhhhhhhhhhc
Q psy15539 115 SMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVG-WGLIIW-------SQSVIMFCAGRLLTGFGGGSFAVVVPMYTA 186 (333)
Q Consensus 115 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 186 (333)
...+...+..+....+..|+..|.=+..+.++..+. .+...+ ...++..++.-++.|++.+........+.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 344444555555555666666533333333322211 111111 124566667778889998888888777766
Q ss_pred ccCCCcchhhHHHHHHHHHHHHHHHHHHH
Q psy15539 187 EIAETEIRGTLGTYFQLQCTAGILFVYAV 215 (333)
Q Consensus 187 e~~~~~~rg~~~~~~~~~~~~g~~~~~~~ 215 (333)
.+|++ .+..+..|.+++++++.++
T Consensus 133 -~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 133 -VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred -cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 45544 3444445555555554443
No 266
>KOG1330|consensus
Probab=95.98 E-value=0.033 Score=50.26 Aligned_cols=118 Identities=14% Similarity=-0.032 Sum_probs=64.8
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccch-------hHHHHHHHHHHHHHHH---HH-HH-HhhHHHHHHHHHH
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGR-------KNTMLLLAVPTLVGWG---LI-IW-SQSVIMFCAGRLL 169 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~~~---~~-~~-~~~~~~~~~~~~l 169 (333)
.|.+..+..++..++..+..+|.+++|.++||+-| .+.=-+...+.+..++ .+ .. ..+...+...-++
T Consensus 278 ~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~ 357 (493)
T KOG1330|consen 278 IGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFL 357 (493)
T ss_pred hCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 34555666777788888899999999999998433 2221122222211111 11 11 1222222233334
Q ss_pred Hhhh-hhhhhhhhhhhhcccCCCcchhhHHHHHH-HHHHHHHHHHHHHhHHH
Q psy15539 170 TGFG-GGSFAVVVPMYTAEIAETEIRGTLGTYFQ-LQCTAGILFVYAVGSWA 219 (333)
Q Consensus 170 ~G~~-~g~~~~~~~~~~~e~~~~~~rg~~~~~~~-~~~~~g~~~~~~~~~~~ 219 (333)
.|.. .-...+...-...|..|++.|..+.++.. ....+|..-+|.+-+.+
T Consensus 358 ~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGil 409 (493)
T KOG1330|consen 358 VGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGIL 409 (493)
T ss_pred HHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhH
Confidence 4433 22334445556789999999999999844 44445555555344433
No 267
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.81 E-value=0.42 Score=43.12 Aligned_cols=97 Identities=9% Similarity=-0.031 Sum_probs=70.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH--HHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhh
Q psy15539 105 TESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLL--LAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVP 182 (333)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~ 182 (333)
...-.|.+-++..+...++.+..|++..++.+-.-+.+ ..++.+...+++.+.+|.+..+++.++.+.......++..
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~ 362 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIAS 362 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456888888888899999999999777777554444 3455556666777888999999998888877777777666
Q ss_pred hhhcccCCCcchhhHHHHH
Q psy15539 183 MYTAEIAETEIRGTLGTYF 201 (333)
Q Consensus 183 ~~~~e~~~~~~rg~~~~~~ 201 (333)
.-++.....+.-|...|+.
T Consensus 363 ~qIA~~l~~e~yaLVFGiN 381 (412)
T PF01770_consen 363 FQIAKNLSEERYALVFGIN 381 (412)
T ss_pred HHHHHhccccceeeeeeeH
Confidence 6666666555556655553
No 268
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.47 E-value=2 Score=39.31 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q psy15539 113 GSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVG 150 (333)
Q Consensus 113 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 150 (333)
.-.-.+..++.++..|.+.||..|.+++..+.++.-++
T Consensus 44 gl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~s 81 (432)
T PF06963_consen 44 GLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLS 81 (432)
T ss_pred HHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHH
Confidence 33445566788888899999999999887776665444
No 269
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.44 E-value=0.0039 Score=58.57 Aligned_cols=74 Identities=15% Similarity=0.208 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHH-HHHHHHHHHHHhhhccch--hHHHHHHHHH
Q psy15539 71 ALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMAL-GAVFGSPVVGNLVDTVGR--KNTMLLLAVP 146 (333)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~Gr--r~~l~~~~~~ 146 (333)
.+...++..........+...+|.|.+. +++.++++++++..+..+ +.++|.+++|++..|+.- |..+.+..+.
T Consensus 307 f~~~~la~~~~~~~~~G~~tF~pKylE~--QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~ 383 (539)
T PF03137_consen 307 FMCLILAGVFESFIVSGFATFLPKYLES--QFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVV 383 (539)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHH
Confidence 3334444444444455556668999887 699999999888877655 677899999999998753 4444333333
No 270
>KOG1479|consensus
Probab=95.24 E-value=0.3 Score=43.69 Aligned_cols=83 Identities=10% Similarity=0.019 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH---------HHHHHHHHHH
Q psy15539 159 SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA---------SVYGLSIICA 229 (333)
Q Consensus 159 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~~~~~~ 229 (333)
.+...++.-.+.+++.|..+...+...++ +|+++-... ..|.++++.+...+.-.. +-...|.+..
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqav----m~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~ 190 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAV----MSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITST 190 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHH----HhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHH
Confidence 45566666778888888777776666555 454443222 233344443333322111 2223444444
Q ss_pred HHHHHHHHHhhcccCCh
Q psy15539 230 LLPIFFVGLMLLMPESP 246 (333)
Q Consensus 230 ~~~~~~~~~~~~~~e~~ 246 (333)
++.++.++++..+|..|
T Consensus 191 ~~~llC~i~y~~l~~lp 207 (406)
T KOG1479|consen 191 VILLLCFVLYLVLPKLP 207 (406)
T ss_pred HHHHHHHHHHHHhhcch
Confidence 44444555555566655
No 271
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.23 E-value=0.046 Score=52.74 Aligned_cols=65 Identities=11% Similarity=0.139 Sum_probs=48.8
Q ss_pred cchhhhhhhhcCCcccccCchhHHHHHHHHHH-HHHHHHHHHHHhhhccc--hhHHHHHHHHHHHHHHHH
Q psy15539 87 WTSPAGDRLIAGEYPFLVTESDLSFIGSSMAL-GAVFGSPVVGNLVDTVG--RKNTMLLLAVPTLVGWGL 153 (333)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~ 153 (333)
.+...+|.+.++ .+|.++.+++++.+...+ +.+++.++.|+++||++ .|+.+.+++++..++.++
T Consensus 348 ~~~~~lP~yl~~--~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 348 GYITFLPKYLEN--QYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHH--HcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 344457777765 489999999999888776 67899999999999998 456666666666655443
No 272
>KOG2325|consensus
Probab=94.21 E-value=0.033 Score=51.08 Aligned_cols=66 Identities=12% Similarity=0.043 Sum_probs=49.7
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHH
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLP 232 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~ 232 (333)
-++.|.+.-.......+.-+|...++..+.+.+.++.+..++..++|++.... +.++.+.+.+...
T Consensus 395 i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~ 464 (488)
T KOG2325|consen 395 IVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLL 464 (488)
T ss_pred hheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHH
Confidence 45666666666666778889999999999999999999999999998887655 5555544444333
No 273
>KOG3097|consensus
Probab=92.72 E-value=1 Score=39.19 Aligned_cols=73 Identities=18% Similarity=0.185 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccC
Q psy15539 116 MALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIA 189 (333)
Q Consensus 116 ~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~ 189 (333)
..+..+..+++.+.+..++|.|..++++...+....... +-+.+..++....+.|++.+..+..--+|+++.-
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 344555667777799999999999888777665443221 2356778888899999999988888888877654
No 274
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=92.35 E-value=0.04 Score=48.06 Aligned_cols=105 Identities=17% Similarity=0.117 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc-chhHHHHHHH--HHHHHHHHHHH----------HHhhHHHHHHHHHHHhhhhhhhh
Q psy15539 112 IGSSMALGAVFGSPVVGNLVDTV-GRKNTMLLLA--VPTLVGWGLII----------WSQSVIMFCAGRLLTGFGGGSFA 178 (333)
Q Consensus 112 ~~~~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~--~~~~~~~~~~~----------~~~~~~~~~~~~~l~G~~~g~~~ 178 (333)
+...++++-.+|..+.++.--+- .+|++.+.+. ++.....++|- +.++-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 45667888888888776642211 2333333211 12211122221 12355677778899999999999
Q ss_pred hhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHh
Q psy15539 179 VVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVG 216 (333)
Q Consensus 179 ~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~ 216 (333)
+....+..+..++++|..+..+......+|..+|..++
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp HHHH----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888877777777777666554
No 275
>KOG1479|consensus
Probab=92.10 E-value=3.5 Score=37.13 Aligned_cols=125 Identities=10% Similarity=0.042 Sum_probs=77.9
Q ss_pred hhhhhhcCCccccc-CchhHHHHHHH-HHHHHHHHHHHHHHhhhccchhHHHHHHHHH-HHHHHHHH-------HHHhhH
Q psy15539 91 AGDRLIAGEYPFLV-TESDLSFIGSS-MALGAVFGSPVVGNLVDTVGRKNTMLLLAVP-TLVGWGLI-------IWSQSV 160 (333)
Q Consensus 91 ~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~-~~~~~~~~-------~~~~~~ 160 (333)
..|.+..+...-+. ++--...+... +++.-.+|.+...++-+.= ||+..+...+= ..+-.+.+ .+-.+-
T Consensus 265 iFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~ 343 (406)
T KOG1479|consen 265 IFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESD 343 (406)
T ss_pred ecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCc
Confidence 35666655322222 22233444555 8888888877776666653 34333322221 11112221 123466
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHh
Q psy15539 161 IMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVG 216 (333)
Q Consensus 161 ~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~ 216 (333)
+.+++.-.+.|+..|-.......+..+..|++++-.+..+.......|...|..++
T Consensus 344 ~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 344 GWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred hHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 78888999999999999889999999999999888777777777666666665443
No 276
>KOG3880|consensus
Probab=91.04 E-value=0.86 Score=39.27 Aligned_cols=108 Identities=13% Similarity=0.086 Sum_probs=73.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccchhH-H--HHH---HHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhh
Q psy15539 107 SDLSFIGSSMALGAVFGSPVVGNLVDTVGRKN-T--MLL---LAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVV 180 (333)
Q Consensus 107 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~-~--l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~ 180 (333)
+|.-|....|.+|-++..-- -++=+-+ . +.+ .-++..+.-.+..+.++++..++..+.-|+-.|..+.-
T Consensus 288 sqYRwyqvlYQlGVFiSRSS-----~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVN 362 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSS-----INLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVN 362 (409)
T ss_pred hcchhhheeeeeeEEEEecc-----ceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHH
Confidence 45788888888876543321 1111212 1 111 11222233334456788888888899999988888887
Q ss_pred hhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 181 VPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 181 ~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
..--+.+-.+++.|-.+++....+-++|..++..++-.+
T Consensus 363 Tf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 363 TFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 777777878899999999999999999988887776443
No 277
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=88.94 E-value=8.4 Score=32.48 Aligned_cols=102 Identities=19% Similarity=0.160 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc-cchhHHHH----HHHHHHHHHHHHHHH-H----hhHHHHHHHHHHHhhhhhhhhh
Q psy15539 110 SFIGSSMALGAVFGSPVVGNLVDT-VGRKNTML----LLAVPTLVGWGLIIW-S----QSVIMFCAGRLLTGFGGGSFAV 179 (333)
Q Consensus 110 ~~~~~~~~~~~~i~~~~~g~l~dr-~Grr~~l~----~~~~~~~~~~~~~~~-~----~~~~~~~~~~~l~G~~~g~~~~ 179 (333)
.....++..|.++|.+..|.+... +-||+.+. .+.++++++.++... . .+...+++..++.|++.=+.++
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 333445556666666666776664 33444433 233444444433211 1 1456678888888887666666
Q ss_pred hhhhhhcccCCCcchhhHHHHHHHHHHHHHHHH
Q psy15539 180 VVPMYTAEIAETEIRGTLGTYFQLQCTAGILFV 212 (333)
Q Consensus 180 ~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~ 212 (333)
+....-.|. +...+-+..-.++..+++|.++-
T Consensus 224 ViL~lPhEy-K~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 224 VILNLPHEY-KGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred HHhcChhhh-cCCCcceehhHHHHHHHHHHHHH
Confidence 655444443 22222223333556666666543
No 278
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=88.32 E-value=5.2 Score=37.13 Aligned_cols=97 Identities=8% Similarity=-0.096 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccchhHHH--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy15539 108 DLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTM--LLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYT 185 (333)
Q Consensus 108 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~ 185 (333)
--|..-++..+...++++..|++-.++.+---+ .+..++.+...+++...+|++..+++.++.+.......++...-+
T Consensus 299 yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~i 378 (511)
T TIGR00806 299 YNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQI 378 (511)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666777777888999999997777553333 334455555566777888999999999999999888888888888
Q ss_pred cccCCCcchhhHHHHHHHH
Q psy15539 186 AEIAETEIRGTLGTYFQLQ 204 (333)
Q Consensus 186 ~e~~~~~~rg~~~~~~~~~ 204 (333)
+.....+.-|...|+....
T Consensus 379 A~~L~~~~~aLvFGiNtfv 397 (511)
T TIGR00806 379 ASSLSKELCALVFGINTFV 397 (511)
T ss_pred HHHhcccceEEEEecHHHH
Confidence 8887777777777775443
No 279
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=87.94 E-value=3.3 Score=30.27 Aligned_cols=44 Identities=30% Similarity=0.597 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q psy15539 107 SDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVG 150 (333)
Q Consensus 107 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 150 (333)
...+.......++..++..+.+.+.|..|.+..+.+..++..++
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 34566677778888888888888888888777665554444433
No 280
>KOG3626|consensus
Probab=85.93 E-value=1.7 Score=42.27 Aligned_cols=77 Identities=10% Similarity=0.143 Sum_probs=50.4
Q ss_pred HHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHH-HHHHHHHHHHHhhhccc--hhHHHHHHHHHHH
Q psy15539 72 LTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMAL-GAVFGSPVVGNLVDTVG--RKNTMLLLAVPTL 148 (333)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~ 148 (333)
+...++..+.......+...+|.|++. ++|.+.+.+..+++...+ +.++|.+++|++..|+- .|....+.++...
T Consensus 395 ~~~~l~~~~~~~~~~G~~tFlPKyLE~--Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 395 MLVVLASVIESLAITGYITFLPKYLET--QFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred HHHHHHHHHHHHHHhhHHHhhHHHHHH--HcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 333444444444455555668999987 699999999988866655 45678888999999865 3444444444443
Q ss_pred HH
Q psy15539 149 VG 150 (333)
Q Consensus 149 ~~ 150 (333)
+.
T Consensus 473 l~ 474 (735)
T KOG3626|consen 473 LS 474 (735)
T ss_pred HH
Confidence 33
No 281
>KOG3810|consensus
Probab=85.88 E-value=6.7 Score=34.68 Aligned_cols=94 Identities=12% Similarity=-0.015 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhHH--HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q psy15539 110 SFIGSSMALGAVFGSPVVGNLVDTVGRKNT--MLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAE 187 (333)
Q Consensus 110 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e 187 (333)
|..-++..+..+++.+..|++--.+.|..- +.++.+..+...+++...++++..+++..+.+.......++...-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 555667777888999999999888877633 444555555666667777888888888888877777777777777777
Q ss_pred cCCCcchhhHHHHHHH
Q psy15539 188 IAETEIRGTLGTYFQL 203 (333)
Q Consensus 188 ~~~~~~rg~~~~~~~~ 203 (333)
-...+.-|...|+...
T Consensus 354 nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTF 369 (433)
T ss_pred hhhhhhheeeeehHHH
Confidence 7777766777766443
No 282
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=85.20 E-value=1.3 Score=37.23 Aligned_cols=51 Identities=16% Similarity=0.086 Sum_probs=30.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHH--hH-----HH--HHHHHHHHHHHHHHHHHHHhhcc
Q psy15539 192 EIRGTLGTYFQLQCTAGILFVYAV--GS-----WA--SVYGLSIICALLPIFFVGLMLLM 242 (333)
Q Consensus 192 ~~rg~~~~~~~~~~~~g~~~~~~~--~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
++|+..+.+...++.+|.++.... -. .+ +|++.+.+.+++.++.++.+..+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455565555566666666654322 11 11 89998888887776655555443
No 283
>KOG4332|consensus
Probab=83.94 E-value=9.7 Score=32.49 Aligned_cols=96 Identities=20% Similarity=0.222 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchh--HHHHHHHHHHHHHHHHHHHH----h---hHHHHHHHHHHHhhhhhhhhh
Q psy15539 109 LSFIGSSMALGAVFGSPVVGNLVDTVGRK--NTMLLLAVPTLVGWGLIIWS----Q---SVIMFCAGRLLTGFGGGSFAV 179 (333)
Q Consensus 109 ~~~~~~~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~l~G~~~g~~~~ 179 (333)
-|.+.+.++++.++|+-+...+..|-..| ..+.+..++.++...+.... + +...-+++.++.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 57888999999999999988887765544 33444444443333322221 1 233345666777778889999
Q ss_pred hhhhhhcccCCCcchhhHHHHHHHH
Q psy15539 180 VVPMYTAEIAETEIRGTLGTYFQLQ 204 (333)
Q Consensus 180 ~~~~~~~e~~~~~~rg~~~~~~~~~ 204 (333)
...-+=++..|.+.|+..+.++-.-
T Consensus 364 SimkmRsqyIPEearstimNfFRvP 388 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVP 388 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheech
Confidence 9998889999999999988875543
No 284
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=82.56 E-value=31 Score=29.78 Aligned_cols=38 Identities=16% Similarity=0.094 Sum_probs=24.3
Q ss_pred CcchhhHHHH-HHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q psy15539 191 TEIRGTLGTY-FQLQCTAGILFVYAVGSWASVYGLSIIC 228 (333)
Q Consensus 191 ~~~rg~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 228 (333)
.+.||...-. .-+..++|.+++.++..+.+|.+.=-+.
T Consensus 153 lN~r~a~LHvl~D~Lgsv~vIia~i~i~~~~w~~~Dpi~ 191 (296)
T COG1230 153 LNMRGAYLHVLGDALGSVGVIIAAIVIRFTGWSWLDPIL 191 (296)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccchHH
Confidence 3456665554 4567777777777777777887744443
No 285
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=82.49 E-value=35 Score=30.35 Aligned_cols=86 Identities=13% Similarity=0.025 Sum_probs=56.3
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHH----HHHHHHHHHHHHH-HH----HhhHHHHHHHHHHHhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTML----LLAVPTLVGWGLI-IW----SQSVIMFCAGRLLTGF 172 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~----~~~~~~~~~~~~~-~~----~~~~~~~~~~~~l~G~ 172 (333)
.|-..-+.+.+.+.+.....+|+...-++.|---.-+.+. .|.+...-..++. .| .++.+.++++-++.|.
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~ 117 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV 117 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 4555568899999999999999999888877533322222 2222211111111 22 2466788888999999
Q ss_pred hhhhhhhhhhhhhcc
Q psy15539 173 GGGSFAVVVPMYTAE 187 (333)
Q Consensus 173 ~~g~~~~~~~~~~~e 187 (333)
-.|...|..+.++..
T Consensus 118 LVG~EiPL~mrml~~ 132 (508)
T COG4262 118 LVGAEIPLLMRMLQR 132 (508)
T ss_pred HHhcchHHHHHHHHH
Confidence 999998888877655
No 286
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=82.22 E-value=8.9 Score=29.37 Aligned_cols=51 Identities=12% Similarity=0.086 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHH
Q psy15539 158 QSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILF 211 (333)
Q Consensus 158 ~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~ 211 (333)
+++..++....+.|+|.- .+.|-+++-.+++++-|..+|+-.+-..++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 345555555555555432 345556777788888899999988777776554
No 287
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.96 E-value=2.8 Score=29.65 Aligned_cols=28 Identities=21% Similarity=0.276 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHhhhcc-chhHHHHH
Q psy15539 115 SMALGAVFGSPVVGNLVDTV-GRKNTMLL 142 (333)
Q Consensus 115 ~~~~~~~i~~~~~g~l~dr~-Grr~~l~~ 142 (333)
.=+++..+.+...||+.||| |.++..++
T Consensus 50 sefIsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 50 SEFISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 33445555566678999985 44444433
No 288
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=81.65 E-value=17 Score=33.85 Aligned_cols=50 Identities=20% Similarity=0.259 Sum_probs=40.1
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHH
Q psy15539 163 FCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFV 212 (333)
Q Consensus 163 ~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~ 212 (333)
+++..++..+..-..+....++-+.+.+|..-|+++.+.++...+|+-..
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP 457 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWP 457 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCch
Confidence 33445666677777888888999999999999999999999988887433
No 289
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=77.99 E-value=60 Score=30.29 Aligned_cols=68 Identities=7% Similarity=-0.051 Sum_probs=42.7
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCC-CcchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHH
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAE-TEIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPIF 234 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~ 234 (333)
-++.|+.....+..--..+.+.+| +++|...+|-++...++..++..++++.+ ||.....+.-++.++
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 444555555566666667777776 45677888877777676665555555444 887666555444443
No 290
>KOG3880|consensus
Probab=76.90 E-value=2.4 Score=36.66 Aligned_cols=128 Identities=12% Similarity=0.067 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccC
Q psy15539 110 SFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIA 189 (333)
Q Consensus 110 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~ 189 (333)
|.+.-+-.+-..+..+.+..+.||+---+-..+..++.+.+.++.+++.+.+.-+++-.+..++.|.-.....++.+. +
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~-Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR-Y 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-C
Confidence 333333444555667777788887654444555566777777888888888888888888777777554444433322 2
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHHHHHHHhhcc
Q psy15539 190 ETEIRGTLGTYFQLQCTAGILFVYAVGSWA------SVYGLSIICALLPIFFVGLMLLM 242 (333)
Q Consensus 190 ~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
++ ...+.+..+.+.++++|..--..+ ..+...++...+.++.+..+|++
T Consensus 144 ~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~l 198 (409)
T KOG3880|consen 144 PS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFL 198 (409)
T ss_pred CC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhe
Confidence 22 223333333333333433222222 34566666666666655565544
No 291
>PRK10263 DNA translocase FtsK; Provisional
Probab=76.42 E-value=26 Score=36.64 Aligned_cols=23 Identities=22% Similarity=0.190 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHhhhccchh
Q psy15539 115 SMALGAVFGSPVVGNLVDTVGRK 137 (333)
Q Consensus 115 ~~~~~~~i~~~~~g~l~dr~Grr 137 (333)
+.+++..+|..+...+..-||--
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl~ 82 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGVM 82 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhHH
Confidence 34455666666666666666643
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=74.45 E-value=0.99 Score=39.37 Aligned_cols=43 Identities=9% Similarity=0.010 Sum_probs=0.0
Q ss_pred HHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHH
Q psy15539 168 LLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAV 215 (333)
Q Consensus 168 ~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~ 215 (333)
++.|++.+........+.+. +|++. ......|.++++++..++
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y----~~a~~~Gq~~aGv~~s~l 47 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKY----TQAVMIGQGLAGVIVSLL 47 (309)
T ss_dssp ------------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHH----HHHHHhhccHHHHHHHHH
Confidence 44566667677777666665 55543 333344555555554433
No 293
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=72.04 E-value=52 Score=26.70 Aligned_cols=24 Identities=8% Similarity=-0.089 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHH
Q psy15539 198 GTYFQLQCTAGILFVYAVGSWASV 221 (333)
Q Consensus 198 ~~~~~~~~~~g~~~~~~~~~~~~~ 221 (333)
....-.++.+|.+++..+....+.
T Consensus 168 ~~~~i~~f~~Ga~~ga~l~~~~~~ 191 (209)
T PF06912_consen 168 YLLIILSFFIGAILGALLYRRLGF 191 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 333445555666666655555554
No 294
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=69.40 E-value=1.2e+02 Score=29.95 Aligned_cols=53 Identities=17% Similarity=0.083 Sum_probs=33.0
Q ss_pred HHHHhhhc----cchhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHhhhhhhhh
Q psy15539 126 VVGNLVDT----VGRKNTMLLLAVPTLVGWGLIIWS-QSVIMFCAGRLLTGFGGGSFA 178 (333)
Q Consensus 126 ~~g~l~dr----~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~g~~~ 178 (333)
+++-+.|. -||.+-++++.++++++++...+. +..+.+..+-++.+++.++..
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlg 99 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLG 99 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 44556664 355677888888887777766654 455555555666666655443
No 295
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=68.97 E-value=1.3e+02 Score=29.89 Aligned_cols=52 Identities=17% Similarity=0.193 Sum_probs=31.4
Q ss_pred HHHHhhhc----cchhHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhhhhh
Q psy15539 126 VVGNLVDT----VGRKNTMLLLAVPTLVGWGLIIW-SQSVIMFCAGRLLTGFGGGSF 177 (333)
Q Consensus 126 ~~g~l~dr----~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~g~~ 177 (333)
+++-++|. -||.+-++++.+++.++++...+ .+..+.+..+-++.+++.++.
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 33556663 35566677777777777666554 345556666666666655543
No 296
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=67.13 E-value=26 Score=27.92 Aligned_cols=24 Identities=13% Similarity=0.383 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhccch
Q psy15539 113 GSSMALGAVFGSPVVGNLVDTVGR 136 (333)
Q Consensus 113 ~~~~~~~~~i~~~~~g~l~dr~Gr 136 (333)
+..|.+++.+++.+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 456778899999999999999886
No 297
>KOG4255|consensus
Probab=64.63 E-value=1e+02 Score=27.27 Aligned_cols=72 Identities=7% Similarity=-0.046 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHHh----------hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHH
Q psy15539 139 TMLLLAVPTLVGWGLIIWSQ----------SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAG 208 (333)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g 208 (333)
+++.-..+..+++++.++-. .-+.++..-|...+...........++++.-|.-.|.. ..+.++.
T Consensus 81 iif~ll~~a~v~~l~laflW~~ts~V~g~~hS~afl~L~F~LAivdc~SnVtFLPFMs~lpp~fL~af-----FvG~GLS 155 (439)
T KOG4255|consen 81 IIFVLLLLACVCQLGLAFLWHDTSPVFGALHSWAFLSLLFGLAIVDCTSNVTFLPFMSQLPPAFLNAF-----FVGMGLS 155 (439)
T ss_pred chhHHHHHHHHHHHHHHHHHhcchhhhcCcchHHHHHHHHHHHHHHhhccchhhhhhhhCChHHHHHH-----HHhccHH
Confidence 33333444466666666532 22455555666666655566666667777655433333 3344444
Q ss_pred HHHHHHH
Q psy15539 209 ILFVYAV 215 (333)
Q Consensus 209 ~~~~~~~ 215 (333)
+.+..++
T Consensus 156 aLlPsll 162 (439)
T KOG4255|consen 156 ALLPSLL 162 (439)
T ss_pred HHHHHHH
Confidence 4444443
No 298
>COG3389 Uncharacterized protein conserved in archaea [Function unknown]
Probab=64.46 E-value=16 Score=29.78 Aligned_cols=30 Identities=17% Similarity=0.009 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHH
Q psy15539 113 GSSMALGAVFGSPVVGNLVDTVGRKNTMLL 142 (333)
Q Consensus 113 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 142 (333)
.+.+.+++.+....+..+.-|+|||+.+-.
T Consensus 34 ns~yyfv~Il~atlfill~Ik~~~kwI~r~ 63 (277)
T COG3389 34 NSVYYFVYILVATLFILLAIKLGRKWIFRG 63 (277)
T ss_pred CceeeehhHHHHHHHHHhheeecceeeehh
Confidence 456777888888888899999999987654
No 299
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=64.31 E-value=1.3e+02 Score=28.33 Aligned_cols=68 Identities=9% Similarity=-0.034 Sum_probs=39.6
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCCC-cchhhHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHH
Q psy15539 166 GRLLTGFGGGSFAVVVPMYTAEIAET-EIRGTLGTYFQLQCTAGILFVYAVGSWA----SVYGLSIICALLPI 233 (333)
Q Consensus 166 ~~~l~G~~~g~~~~~~~~~~~e~~~~-~~rg~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~ 233 (333)
.-+..|+.........-..+.+.+|. +.+...+|-++...++-.++...+++.+ ||+....+.-++.+
T Consensus 288 lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~l 360 (491)
T PF03219_consen 288 LVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVIL 360 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHH
Confidence 34455555555555555666777764 4456666666665555555555555544 88876666544433
No 300
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=62.39 E-value=53 Score=32.11 Aligned_cols=60 Identities=15% Similarity=0.236 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 160 VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 160 ~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.++.+.-.++.|++.........-+...-.|++.|..+.+++.+..++|.++...+...-
T Consensus 565 ~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~ 624 (654)
T TIGR00926 565 ILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFE 624 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344445556666666666555555666778999999999999999999999988887655
No 301
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=62.30 E-value=1.2e+02 Score=27.15 Aligned_cols=100 Identities=14% Similarity=-0.041 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHhhhccc--hhHHHHHHHHHHHHHHHHHHH--HhhH-------------H--HHHHH----HHHHhhhh
Q psy15539 118 LGAVFGSPVVGNLVDTVG--RKNTMLLLAVPTLVGWGLIIW--SQSV-------------I--MFCAG----RLLTGFGG 174 (333)
Q Consensus 118 ~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~--~~~~-------------~--~~~~~----~~l~G~~~ 174 (333)
+..+++++++-.++|..| ++..+..+..+.+++.++... ..|+ . .-.+. -.+.|+.+
T Consensus 174 ~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~q 253 (354)
T PF05631_consen 174 VVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQ 253 (354)
T ss_pred HHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHH
Confidence 344555666666777665 466777777777766665442 1111 0 01111 14667777
Q ss_pred hhhhhhhhhhhcccCCCcc---hhhHHHHHHHHHHHHHHHHHHHhH
Q psy15539 175 GSFAVVVPMYTAEIAETEI---RGTLGTYFQLQCTAGILFVYAVGS 217 (333)
Q Consensus 175 g~~~~~~~~~~~e~~~~~~---rg~~~~~~~~~~~~g~~~~~~~~~ 217 (333)
......++.++-.|.|.=. +..-.|+....+.+..++|..+..
T Consensus 254 slFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~ 299 (354)
T PF05631_consen 254 SLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFS 299 (354)
T ss_pred HHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 7778888888888887533 334455555555555666555543
No 302
>KOG0637|consensus
Probab=61.24 E-value=15 Score=33.72 Aligned_cols=60 Identities=13% Similarity=-0.036 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhh
Q psy15539 113 GSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGF 172 (333)
Q Consensus 113 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 172 (333)
..++.+...+.+...-++.+|+|-|+.++.+.....++..+.+...+......-+...|+
T Consensus 338 L~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~ 397 (498)
T KOG0637|consen 338 LMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGI 397 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcce
Confidence 455666777888888999999997776666666566665555555555444444544443
No 303
>COG1422 Predicted membrane protein [Function unknown]
Probab=60.93 E-value=87 Score=25.22 Aligned_cols=12 Identities=8% Similarity=0.188 Sum_probs=5.7
Q ss_pred HHHHHHHHHHhH
Q psy15539 206 TAGILFVYAVGS 217 (333)
Q Consensus 206 ~~g~~~~~~~~~ 217 (333)
.+...++|.++.
T Consensus 32 ~ln~~f~P~i~~ 43 (201)
T COG1422 32 ALNVVFGPLLSP 43 (201)
T ss_pred HHHHHHhhhccc
Confidence 334445555544
No 304
>KOG2881|consensus
Probab=60.14 E-value=75 Score=26.79 Aligned_cols=10 Identities=10% Similarity=-0.107 Sum_probs=4.2
Q ss_pred HHHHHHHHHH
Q psy15539 222 YGLSIICALL 231 (333)
Q Consensus 222 ~~~~~~~~~~ 231 (333)
++..++.+++
T Consensus 130 ~~T~~~~t~L 139 (294)
T KOG2881|consen 130 KYTYYLATAL 139 (294)
T ss_pred HHHHHHHHHH
Confidence 3444444433
No 305
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=59.48 E-value=19 Score=25.60 Aligned_cols=49 Identities=22% Similarity=0.157 Sum_probs=39.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q psy15539 107 SDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLII 155 (333)
Q Consensus 107 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 155 (333)
...|-..++|.-.+++.++++++..|+.-+-+.=.+|..++.++..+..
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheE
Confidence 4577788999999999999999999999887777777777766655443
No 306
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=59.43 E-value=1.2e+02 Score=26.30 Aligned_cols=12 Identities=25% Similarity=0.529 Sum_probs=5.5
Q ss_pred HHHHHHHhhhhh
Q psy15539 164 CAGRLLTGFGGG 175 (333)
Q Consensus 164 ~~~~~l~G~~~g 175 (333)
.+.-.+.+++.|
T Consensus 264 ~~~~~~~a~aaG 275 (317)
T PF02535_consen 264 IVSGILLAFAAG 275 (317)
T ss_pred HHHHHHHHHHHH
Confidence 333444555444
No 307
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=59.30 E-value=1e+02 Score=25.92 Aligned_cols=55 Identities=11% Similarity=0.212 Sum_probs=25.3
Q ss_pred HhhHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHH
Q psy15539 157 SQSVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAV 215 (333)
Q Consensus 157 ~~~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~ 215 (333)
+.|...++.+....|+..... ...-......| .|+....+...++++|..+...+
T Consensus 31 S~s~~FyY~sg~~lGv~~s~l--i~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~l~~~ 85 (249)
T PF10225_consen 31 SRSVLFYYSSGISLGVLASLL--ILLFQLSKLLP--RKSMFYAVLYGGWSFGLYFLQQL 85 (249)
T ss_pred ccChhHHHhhhHHHHHHHHHH--HHHHHHHHHcc--CcchhHHHHhhhhHHHHHHHHHH
Confidence 445555555555555543322 22223456666 33333444444445554444433
No 308
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=59.02 E-value=1.2e+02 Score=26.10 Aligned_cols=35 Identities=11% Similarity=-0.199 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhhhh
Q psy15539 142 LLAVPTLVGWGLIIW-SQSVIMFCAGRLLTGFGGGS 176 (333)
Q Consensus 142 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~g~ 176 (333)
++.+++++++++..+ .++.+.+.+.-++.+++.++
T Consensus 4 ~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 344444344444333 34455555555555555554
No 309
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=57.23 E-value=48 Score=25.37 Aligned_cols=26 Identities=19% Similarity=0.364 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhH
Q psy15539 113 GSSMALGAVFGSPVVGNLVDTVGRKN 138 (333)
Q Consensus 113 ~~~~~~~~~i~~~~~g~l~dr~Grr~ 138 (333)
+..|.+|+.+++.+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 45677889999999999999988764
No 310
>PRK02237 hypothetical protein; Provisional
Probab=57.18 E-value=31 Score=24.64 Aligned_cols=48 Identities=23% Similarity=0.092 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q psy15539 108 DLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLII 155 (333)
Q Consensus 108 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 155 (333)
..|-..++|.-.+++.+++++++.|+.-.-+.=.+|..++.++..+..
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe
Confidence 478888999999999999999999998877777777777766655443
No 311
>TIGR00930 2a30 K-Cl cotransporter.
Probab=56.59 E-value=2e+02 Score=29.70 Aligned_cols=10 Identities=10% Similarity=-0.007 Sum_probs=4.6
Q ss_pred HHHHHHHHHH
Q psy15539 217 SWASVYGLSI 226 (333)
Q Consensus 217 ~~~~~~~~~~ 226 (333)
.+++|....+
T Consensus 515 f~i~w~~ali 524 (953)
T TIGR00930 515 FLISWWAALV 524 (953)
T ss_pred HHHHHHHHHH
Confidence 3346644433
No 312
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=51.60 E-value=88 Score=22.44 Aligned_cols=24 Identities=8% Similarity=-0.040 Sum_probs=14.2
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCC
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIAE 190 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~~ 190 (333)
|.+.+.|.-+.++...++..|...
T Consensus 56 ~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 56 YAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHhhHccccccHHHHHHHHHH
Confidence 334455555556667777777654
No 313
>KOG2927|consensus
Probab=49.29 E-value=28 Score=30.49 Aligned_cols=6 Identities=0% Similarity=-0.058 Sum_probs=2.6
Q ss_pred Hhhhcc
Q psy15539 129 NLVDTV 134 (333)
Q Consensus 129 ~l~dr~ 134 (333)
|+.|+.
T Consensus 181 W~yep~ 186 (372)
T KOG2927|consen 181 WIYEPR 186 (372)
T ss_pred EeccCC
Confidence 444443
No 314
>KOG1237|consensus
Probab=48.53 E-value=50 Score=31.70 Aligned_cols=61 Identities=15% Similarity=0.087 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 159 SVIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 159 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
|..+++-=.++.|++.........-+.-+-+|++.|+.+.+++....++|..+...+....
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v 517 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLV 517 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777789999999998888888888889999999999999999999999888776433
No 315
>PTZ00370 STEVOR; Provisional
Probab=47.54 E-value=52 Score=28.07 Aligned_cols=23 Identities=9% Similarity=0.197 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Q psy15539 220 SVYGLSIICALLPIFFVGLMLLM 242 (333)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
+|-...++..+++++.+++++|+
T Consensus 256 Pygiaalvllil~vvliilYiwl 278 (296)
T PTZ00370 256 PYGIAALVLLILAVVLIILYIWL 278 (296)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHH
Confidence 44444445555555555444443
No 316
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=46.79 E-value=1.5e+02 Score=25.02 Aligned_cols=22 Identities=14% Similarity=0.033 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHhhcccC
Q psy15539 223 GLSIICALLPIFFVGLMLLMPE 244 (333)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~e 244 (333)
+.-++..++.++....+.+++.
T Consensus 116 ~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 116 WLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred HHHHHHHHHHHHHHHheeeecC
Confidence 3344444444555555555543
No 317
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=46.12 E-value=91 Score=23.50 Aligned_cols=28 Identities=11% Similarity=0.093 Sum_probs=20.1
Q ss_pred hcccCCCcchhhHHHHHHHHHHHHHHHH
Q psy15539 185 TAEIAETEIRGTLGTYFQLQCTAGILFV 212 (333)
Q Consensus 185 ~~e~~~~~~rg~~~~~~~~~~~~g~~~~ 212 (333)
+.|++|+..|....+.++.......-..
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k~~~ 87 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVKSLF 87 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999998887765555444433
No 318
>COG4769 Predicted membrane protein [Function unknown]
Probab=45.92 E-value=45 Score=25.85 Aligned_cols=50 Identities=12% Similarity=0.048 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhh
Q psy15539 117 ALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGF 172 (333)
Q Consensus 117 ~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 172 (333)
.+...+.+...-++..++|.|.+-++|.-. .-++.+|..++++.+++.+-
T Consensus 83 sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 83 SFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhc
Confidence 334444455555677778877764433322 22456777778777777653
No 319
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=44.00 E-value=25 Score=28.95 Aligned_cols=55 Identities=13% Similarity=0.076 Sum_probs=37.5
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 164 CAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 164 ~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.....-.|+|.|..++....-+.+.+| +......++...++.+....|-.+.-++
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455688888888888888888886 5666777777777666666665554443
No 320
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=42.91 E-value=1.4e+02 Score=22.70 Aligned_cols=42 Identities=10% Similarity=-0.023 Sum_probs=31.5
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHH
Q psy15539 101 PFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLL 142 (333)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 142 (333)
+.|++....-....+.++.-.++-++..+++|+.++-..+.+
T Consensus 66 eiGi~EkslL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~~~ 107 (150)
T COG3086 66 ELGIEEKSLLKSALLVYIFPLVGLFLGAILAQYLFFSELIVI 107 (150)
T ss_pred EEccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 367776666666677788888888888899999888766544
No 321
>KOG3574|consensus
Probab=42.76 E-value=1.9e+02 Score=26.48 Aligned_cols=55 Identities=18% Similarity=0.087 Sum_probs=40.8
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhH
Q psy15539 163 FCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGS 217 (333)
Q Consensus 163 ~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~ 217 (333)
.+....+.+...-..+....++-+.+.+|..-|+.+.+.+.-..+|.-....+..
T Consensus 372 ~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l 426 (510)
T KOG3574|consen 372 LITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVAL 426 (510)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHH
Confidence 3334556666666667778889999999999999999999988888755444433
No 322
>PRK11469 hypothetical protein; Provisional
Probab=42.49 E-value=1.6e+02 Score=23.56 Aligned_cols=31 Identities=23% Similarity=0.162 Sum_probs=20.0
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHHHHHHH
Q psy15539 123 GSPVVGNLVDTVGRKNTMLLLAVPTLVGWGL 153 (333)
Q Consensus 123 ~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 153 (333)
|..+..++.+++|+|.-++-|.++..++.-.
T Consensus 151 G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 151 GMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334445666788887777777777766543
No 323
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=42.12 E-value=1.4e+02 Score=21.92 Aligned_cols=23 Identities=17% Similarity=0.050 Sum_probs=12.0
Q ss_pred HHHHhhhhhhhhhhhhhhhcccC
Q psy15539 167 RLLTGFGGGSFAVVVPMYTAEIA 189 (333)
Q Consensus 167 ~~l~G~~~g~~~~~~~~~~~e~~ 189 (333)
|.+.+.|.-+.++...++..|..
T Consensus 60 ~~~l~tGflGgfTTFSTf~~e~~ 82 (119)
T PRK14230 60 KLLLITGFLGSLTTLSGFSLETV 82 (119)
T ss_pred HHHHHHHHhchHhhHHHHHHHHH
Confidence 33444444444555666666654
No 324
>KOG4830|consensus
Probab=41.03 E-value=36 Score=28.94 Aligned_cols=129 Identities=9% Similarity=-0.019 Sum_probs=68.2
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhccchhhhhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhh-hccchhHHH
Q psy15539 62 AKRITQYMAALTATIGGFIMGTILGWTSPAGDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLV-DTVGRKNTM 140 (333)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~-dr~Grr~~l 140 (333)
+..|.+.....-+.+.+++.-....+...+++.+..+ +++.+.+...++-.+.++..+..+.+..-.- ++...|...
T Consensus 194 W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfvid--dlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayY 271 (412)
T KOG4830|consen 194 WTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVID--DLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYY 271 (412)
T ss_pred chhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEee--hhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeee
Confidence 3334443444444455555444444444556655544 3666666666666666666665555443222 222233344
Q ss_pred HHHHHHHHHHHHHHHHH-hhHH-HHHHHHHHHhhhhhhhhhhhhhhhcccCCCc
Q psy15539 141 LLLAVPTLVGWGLIIWS-QSVI-MFCAGRLLTGFGGGSFAVVVPMYTAEIAETE 192 (333)
Q Consensus 141 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~ 192 (333)
..|.+++..++..+.+- +++. .+++...+.|++.+........+.+....++
T Consensus 272 saGgiiwifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~ 325 (412)
T KOG4830|consen 272 SAGGIIWIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKN 325 (412)
T ss_pred ecccHHHHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 55666666655544432 2332 2345567788888877666666655555443
No 325
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=40.70 E-value=2.5e+02 Score=24.49 Aligned_cols=13 Identities=8% Similarity=-0.133 Sum_probs=6.2
Q ss_pred cCCCcchhhHHHH
Q psy15539 188 IAETEIRGTLGTY 200 (333)
Q Consensus 188 ~~~~~~rg~~~~~ 200 (333)
=+|-.+.|.+--+
T Consensus 141 p~PlgY~gLGEi~ 153 (303)
T COG1575 141 PFPLGYMGLGEIF 153 (303)
T ss_pred CcCcccCCHHHHH
Confidence 3555555544433
No 326
>COG1422 Predicted membrane protein [Function unknown]
Probab=40.42 E-value=1.3e+02 Score=24.23 Aligned_cols=26 Identities=12% Similarity=0.115 Sum_probs=10.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHH
Q psy15539 208 GILFVYAVGSWASVYGLSIICALLPI 233 (333)
Q Consensus 208 g~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (333)
+..+...++..++.+.+.++..+.++
T Consensus 30 ~~~ln~~f~P~i~~~~p~lvilV~av 55 (201)
T COG1422 30 GGALNVVFGPLLSPLPPHLVILVAAV 55 (201)
T ss_pred HHHHHHHHhhhccccccHHHHHHHHH
Confidence 33344444444444444444333333
No 327
>PRK11715 inner membrane protein; Provisional
Probab=38.77 E-value=3.2e+02 Score=25.27 Aligned_cols=32 Identities=16% Similarity=0.023 Sum_probs=17.7
Q ss_pred HHhhhccchhHH-----HHHHHHHHHHHHHHHHHHhh
Q psy15539 128 GNLVDTVGRKNT-----MLLLAVPTLVGWGLIIWSQS 159 (333)
Q Consensus 128 g~l~dr~Grr~~-----l~~~~~~~~~~~~~~~~~~~ 159 (333)
=++.+...++++ +++|+.+...-.++.+++..
T Consensus 318 fFlfE~~~~~~iHpiQYlLVGlAl~lFYLLLLSlSEH 354 (436)
T PRK11715 318 FFLFELLKKLRIHPVQYLLVGLALVLFYLLLLSLSEH 354 (436)
T ss_pred HHHHHHhcCceecHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345555555543 45566666555666666553
No 328
>KOG3312|consensus
Probab=37.72 E-value=1e+02 Score=23.37 Aligned_cols=11 Identities=9% Similarity=0.298 Sum_probs=4.8
Q ss_pred HhhcccCChHH
Q psy15539 238 LMLLMPESPQF 248 (333)
Q Consensus 238 ~~~~~~e~~~~ 248 (333)
.+..+..+.++
T Consensus 26 tWvlvYRt~~Y 36 (186)
T KOG3312|consen 26 TWVLVYRTDKY 36 (186)
T ss_pred eEEEEEehhHH
Confidence 34444444443
No 329
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=37.13 E-value=91 Score=21.36 Aligned_cols=33 Identities=12% Similarity=0.169 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCCCc
Q psy15539 160 VIMFCAGRLLTGFGGGSFAVVVPMYTAEIAETE 192 (333)
Q Consensus 160 ~~~~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~ 192 (333)
-+-++++|.++|-+.+..-........+.-|..
T Consensus 31 t~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~plA 63 (89)
T PF04550_consen 31 TLRLFIGRVILGSAVSVVAGAALIQFPDLPPLA 63 (89)
T ss_pred chhHHhHHHHHhhHHHHHHHHHHhcCCCCCHHH
Confidence 355788888888887766666665555655543
No 330
>COG3462 Predicted membrane protein [Function unknown]
Probab=37.02 E-value=1.3e+02 Score=21.53 Aligned_cols=24 Identities=17% Similarity=0.054 Sum_probs=9.8
Q ss_pred HHHHHHHHHHhCCCcchHHHHHHH
Q psy15539 256 KQAKESLQWFRGSEYDIDSEITDM 279 (333)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~ 279 (333)
+.+.+++++-..+.+-.++|..++
T Consensus 88 sRA~eIlkER~AkGEItEEEY~r~ 111 (117)
T COG3462 88 SRAEEILKERYAKGEITEEEYRRI 111 (117)
T ss_pred cHHHHHHHHHHhcCCCCHHHHHHH
Confidence 345555543332333334444433
No 331
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=36.62 E-value=1.5e+02 Score=20.93 Aligned_cols=19 Identities=26% Similarity=0.392 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHhHHH
Q psy15539 201 FQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 201 ~~~~~~~g~~~~~~~~~~~ 219 (333)
......+..+++..++.|+
T Consensus 48 IG~~~v~pil~G~~lG~WL 66 (100)
T TIGR02230 48 IGWSVAIPTLLGVAVGIWL 66 (100)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3334444455566666666
No 332
>PRK03818 putative transporter; Validated
Probab=36.26 E-value=4e+02 Score=25.60 Aligned_cols=80 Identities=14% Similarity=0.018 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHhhhhhhhhhhhhhhhc
Q psy15539 108 DLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWS-QSVIMFCAGRLLTGFGGGSFAVVVPMYTA 186 (333)
Q Consensus 108 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 186 (333)
+.|+...++.+|.-.|.-+..-+.+..|.+.. .++.++..+..++..+. ....-+=..+.+-.++.+...+...+++.
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a~ 514 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWI-GYGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFAN 514 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHHh
Confidence 34555555555555555555554444555543 34444444333333222 11111111222222334445566666777
Q ss_pred cc
Q psy15539 187 EI 188 (333)
Q Consensus 187 e~ 188 (333)
|.
T Consensus 515 ~~ 516 (552)
T PRK03818 515 NL 516 (552)
T ss_pred cc
Confidence 74
No 333
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=34.21 E-value=1.5e+02 Score=20.21 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=26.6
Q ss_pred HHHHHHHHHhhhccch-------hHHHHHHHHHHHHHHHHHHHHhh
Q psy15539 121 VFGSPVVGNLVDTVGR-------KNTMLLLAVPTLVGWGLIIWSQS 159 (333)
Q Consensus 121 ~i~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~ 159 (333)
..+.+.++++.+|.-+ ++.+.++.++...+.+++++..+
T Consensus 32 ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 32 TAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 3455556666666554 67788888888888777777554
No 334
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=34.07 E-value=3.5e+02 Score=26.06 Aligned_cols=81 Identities=22% Similarity=0.207 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHh-hhhhhhhhhhhhhh
Q psy15539 108 DLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ-SVIMFCAGRLLTG-FGGGSFAVVVPMYT 185 (333)
Q Consensus 108 ~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G-~~~g~~~~~~~~~~ 185 (333)
+.|+...++.+|.-.|.-+..-+.. .|-+. ++++.++..+..++..+.. -+.-+=.. ...| ++.+...+....+.
T Consensus 451 ~~GL~lFla~vG~~aG~~f~~~l~~-~G~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~aG~~t~t~~l~~a 527 (562)
T TIGR03802 451 DLGLALFIAVVGLSAGPQAVTAIKE-MGLTL-FLLGIVVTILPLIITMLIGKYVLKYDPA-LLLGALAGARTATPALGAV 527 (562)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCHH-HHHHHhhccCCCcHHHHHH
Confidence 3566667777777777766666643 55544 3344444444433322211 11111111 1223 33344455556666
Q ss_pred cccCCC
Q psy15539 186 AEIAET 191 (333)
Q Consensus 186 ~e~~~~ 191 (333)
.|..+.
T Consensus 528 ~~~~~~ 533 (562)
T TIGR03802 528 LERAGS 533 (562)
T ss_pred HHhcCC
Confidence 676543
No 335
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=33.01 E-value=1.3e+02 Score=22.74 Aligned_cols=24 Identities=13% Similarity=0.094 Sum_probs=17.8
Q ss_pred hcccCCCcchhhHHHHHHHHHHHH
Q psy15539 185 TAEIAETEIRGTLGTYFQLQCTAG 208 (333)
Q Consensus 185 ~~e~~~~~~rg~~~~~~~~~~~~g 208 (333)
+.|++|+..|....+.++......
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s~~ 81 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTNFV 81 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHH
Confidence 469999999988887766554443
No 336
>KOG3097|consensus
Probab=32.72 E-value=48 Score=29.28 Aligned_cols=42 Identities=26% Similarity=0.345 Sum_probs=35.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy15539 106 ESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPT 147 (333)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 147 (333)
-...+..+..+.++..+.+.+.|.+..++||-..+..+.+.-
T Consensus 309 v~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~ 350 (390)
T KOG3097|consen 309 VSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVH 350 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHH
Confidence 357788889999999999999999999999999888776554
No 337
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=32.30 E-value=3.7e+02 Score=24.01 Aligned_cols=68 Identities=19% Similarity=0.130 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHH---HHHHHHHHHhhHHHHHHHHHHHhhhhhhhh
Q psy15539 110 SFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTL---VGWGLIIWSQSVIMFCAGRLLTGFGGGSFA 178 (333)
Q Consensus 110 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~ 178 (333)
|.+..+..++..+ .++.+++.+.+|--+.+..++++.. -..+....+.|.........+.|.-.|...
T Consensus 50 GI~~laP~la~~l-~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TI 120 (354)
T PF04346_consen 50 GIMALAPVLAAFL-SPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATI 120 (354)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccE
Confidence 3333333343333 3445677888888888877766643 234445566677666666666666555443
No 338
>PRK03612 spermidine synthase; Provisional
Probab=32.21 E-value=2.8e+02 Score=26.35 Aligned_cols=44 Identities=18% Similarity=0.176 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH-hhhccchhHHHH-HHHHHHHHH
Q psy15539 107 SDLSFIGSSMALGAVFGSPVVGN-LVDTVGRKNTML-LLAVPTLVG 150 (333)
Q Consensus 107 ~~~~~~~~~~~~~~~i~~~~~g~-l~dr~Grr~~l~-~~~~~~~~~ 150 (333)
..+|.+.++..+|.++|+++.++ +...+|-...+. ++.+..+++
T Consensus 145 ~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 145 HNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred hhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 46788899999999999999987 455899765544 444444444
No 339
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=31.84 E-value=1.9e+02 Score=20.49 Aligned_cols=19 Identities=21% Similarity=0.142 Sum_probs=8.5
Q ss_pred HHHHHHhhh-ccchhHHHHH
Q psy15539 124 SPVVGNLVD-TVGRKNTMLL 142 (333)
Q Consensus 124 ~~~~g~l~d-r~Grr~~l~~ 142 (333)
+.+.|...| ++|-++.+.+
T Consensus 59 G~~lG~WLD~~~~t~~~~tl 78 (100)
T TIGR02230 59 GVAVGIWLDRHYPSPFSWTL 78 (100)
T ss_pred HHHHHHHHHhhcCCCcHHHH
Confidence 334444444 4555444333
No 340
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=31.61 E-value=4.2e+02 Score=24.48 Aligned_cols=33 Identities=15% Similarity=0.039 Sum_probs=18.7
Q ss_pred HHHhhhccchhHH-----HHHHHHHHHHHHHHHHHHhh
Q psy15539 127 VGNLVDTVGRKNT-----MLLLAVPTLVGWGLIIWSQS 159 (333)
Q Consensus 127 ~g~l~dr~Grr~~-----l~~~~~~~~~~~~~~~~~~~ 159 (333)
.-++.+.+.++++ +++|+.+.....++.+++..
T Consensus 311 ~fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEh 348 (430)
T PF06123_consen 311 AFFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEH 348 (430)
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3345555555543 55566666666666666654
No 341
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=31.29 E-value=86 Score=16.42 Aligned_cols=10 Identities=20% Similarity=0.664 Sum_probs=3.1
Q ss_pred HhhcccCChH
Q psy15539 238 LMLLMPESPQ 247 (333)
Q Consensus 238 ~~~~~~e~~~ 247 (333)
...+++|+|+
T Consensus 19 fAI~FRePPr 28 (29)
T PF01405_consen 19 FAIFFREPPR 28 (29)
T ss_dssp HHHHSS----
T ss_pred hhhhccCCCC
Confidence 3345677764
No 342
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=31.02 E-value=1.7e+02 Score=19.90 Aligned_cols=45 Identities=16% Similarity=0.200 Sum_probs=22.6
Q ss_pred hhhhhhhhhhhhhhhccc-CCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 171 GFGGGSFAVVVPMYTAEI-AETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 171 G~~~g~~~~~~~~~~~e~-~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
|++--...|..+.++.|. +... ..+.....+.+|.++|.+.....
T Consensus 5 GigRFayTplLP~M~~~~~ls~~----~ag~lasaNy~GYL~GAl~~~~~ 50 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSLS----QAGWLASANYLGYLVGALLASRL 50 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 444334556666666664 3333 33344445555555555555443
No 343
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=29.61 E-value=96 Score=16.46 Aligned_cols=9 Identities=11% Similarity=0.512 Sum_probs=5.5
Q ss_pred hhcccCChH
Q psy15539 239 MLLMPESPQ 247 (333)
Q Consensus 239 ~~~~~e~~~ 247 (333)
..+++|+|+
T Consensus 20 AIfFRepPr 28 (31)
T PRK11875 20 AIAFRDPPK 28 (31)
T ss_pred hhhccCCCC
Confidence 345677774
No 344
>PRK07419 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional
Probab=29.60 E-value=3.8e+02 Score=23.37 Aligned_cols=14 Identities=14% Similarity=0.071 Sum_probs=7.8
Q ss_pred hhcccCCCcchhhH
Q psy15539 184 YTAEIAETEIRGTL 197 (333)
Q Consensus 184 ~~~e~~~~~~rg~~ 197 (333)
|...=+|-++||.+
T Consensus 135 YT~gP~~l~y~gLG 148 (304)
T PRK07419 135 YQGPPFRLGYQGLG 148 (304)
T ss_pred ccCCCcccCCCCch
Confidence 33444566777754
No 345
>KOG4112|consensus
Probab=29.59 E-value=2e+02 Score=20.01 Aligned_cols=23 Identities=22% Similarity=0.203 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 197 LGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 197 ~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
+=-+++....+|+++|.+.+.+.
T Consensus 24 aEr~~q~ilti~aiVg~i~Gf~~ 46 (101)
T KOG4112|consen 24 AERFQQLILTIGAIVGFIYGFAQ 46 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44467778888888888887766
No 346
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=29.29 E-value=4.9e+02 Score=24.56 Aligned_cols=71 Identities=15% Similarity=0.013 Sum_probs=40.2
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCCC-cchhhHHHHHHHHHHHH-HHHHHHHhHHH----HHHHHHHHHHHHHHHH
Q psy15539 165 AGRLLTGFGGGSFAVVVPMYTAEIAET-EIRGTLGTYFQLQCTAG-ILFVYAVGSWA----SVYGLSIICALLPIFF 235 (333)
Q Consensus 165 ~~~~l~G~~~g~~~~~~~~~~~e~~~~-~~rg~~~~~~~~~~~~g-~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 235 (333)
+.-...|++.......--.-+.+.+|. +.+...+|-++...++- .++...+++.+ ||.+...+.-++.++.
T Consensus 289 l~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~lit 365 (509)
T COG3202 289 LLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHH
Confidence 334445555555555555566777764 44667777777666665 33333344443 7876666655555544
No 347
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=28.89 E-value=1.9e+02 Score=22.78 Aligned_cols=28 Identities=14% Similarity=0.096 Sum_probs=13.7
Q ss_pred cccCchhH-HH-HHHHHHHHHHHHHHHHHH
Q psy15539 102 FLVTESDL-SF-IGSSMALGAVFGSPVVGN 129 (333)
Q Consensus 102 ~~~~~~~~-~~-~~~~~~~~~~i~~~~~g~ 129 (333)
+|+++..+ ++ ..+...+|+++|..++..
T Consensus 72 ~GlDP~~~~g~~t~a~g~lG~L~GP~~G~~ 101 (173)
T PF08566_consen 72 MGLDPFMVYGLATLACGALGWLVGPSLGNQ 101 (173)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 58877643 22 233344555555544433
No 348
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=27.74 E-value=4e+02 Score=24.77 Aligned_cols=95 Identities=14% Similarity=0.071 Sum_probs=54.5
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIWSQ---SVIMFCAGRLLTGFGGGSFA 178 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G~~~g~~~ 178 (333)
.+++.++...+.+.-.+...++.++--....+.|-|-....+.-...++.+...... .....+.+-+..|+..-...
T Consensus 44 ~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~~li~ 123 (451)
T COG2233 44 LGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVYFLIS 123 (451)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999998876644445556555555444444443333221 24444444444444333222
Q ss_pred hhhhhhhcccCCCcchhh
Q psy15539 179 VVVPMYTAEIAETEIRGT 196 (333)
Q Consensus 179 ~~~~~~~~e~~~~~~rg~ 196 (333)
+.....+...+||---|.
T Consensus 124 ~~~~~~l~rlfPPvVtG~ 141 (451)
T COG2233 124 PIVKIRLARLFPPVVTGP 141 (451)
T ss_pred HHHHHHHHHhCCCceEEe
Confidence 222225566666654443
No 349
>COG2119 Predicted membrane protein [Function unknown]
Probab=27.65 E-value=2.6e+02 Score=22.33 Aligned_cols=39 Identities=13% Similarity=0.048 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHH
Q psy15539 113 GSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGW 151 (333)
Q Consensus 113 ~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 151 (333)
+....+...++...+.++++|+..|++-.++.++..+..
T Consensus 140 ~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 140 TLGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 344556777888888899999999998887766655444
No 350
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=27.44 E-value=99 Score=19.95 Aligned_cols=36 Identities=11% Similarity=0.093 Sum_probs=30.0
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRK 137 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr 137 (333)
++.+..+.+.+.....+..++-..+..++-||+-+|
T Consensus 29 ~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 29 LGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 566767888888888888899999999999987654
No 351
>CHL00031 psbT photosystem II protein T
Probab=27.30 E-value=1e+02 Score=16.69 Aligned_cols=10 Identities=20% Similarity=0.664 Sum_probs=6.1
Q ss_pred HhhcccCChH
Q psy15539 238 LMLLMPESPQ 247 (333)
Q Consensus 238 ~~~~~~e~~~ 247 (333)
...+++|+|+
T Consensus 19 FAI~FRePPr 28 (33)
T CHL00031 19 FAIFFREPPK 28 (33)
T ss_pred HhheecCCCC
Confidence 3346678775
No 352
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=27.20 E-value=2.4e+02 Score=25.39 Aligned_cols=19 Identities=5% Similarity=0.001 Sum_probs=10.2
Q ss_pred hhhhhhhhhhhhhcccCCC
Q psy15539 173 GGGSFAVVVPMYTAEIAET 191 (333)
Q Consensus 173 ~~g~~~~~~~~~~~e~~~~ 191 (333)
..-...+..+.++.|.+=.
T Consensus 247 ~~F~vl~ii~~i~~E~~L~ 265 (374)
T PF01528_consen 247 NVFAVLSIIYLIVIEVVLA 265 (374)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3334455566666776533
No 353
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=26.99 E-value=99 Score=22.62 Aligned_cols=12 Identities=17% Similarity=0.299 Sum_probs=7.3
Q ss_pred HHHhhcccCChH
Q psy15539 236 VGLMLLMPESPQ 247 (333)
Q Consensus 236 ~~~~~~~~e~~~ 247 (333)
++.++++|+.|.
T Consensus 57 i~l~~~lp~~P~ 68 (118)
T PRK10697 57 IILSFALDPMPD 68 (118)
T ss_pred HHHHHhccCCcc
Confidence 445566777664
No 354
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=26.91 E-value=2.4e+02 Score=25.08 Aligned_cols=47 Identities=13% Similarity=0.192 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q psy15539 110 SFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLIIW 156 (333)
Q Consensus 110 ~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 156 (333)
.+.....++|..++..+.+++-|++|....+.+..+...++.+....
T Consensus 75 ~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 75 NWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 45666677788888888889999999888888877777766665543
No 355
>PF07556 DUF1538: Protein of unknown function (DUF1538); InterPro: IPR011435 This family of protenis of unknown function contains several conserved glycines and phenylalanines.
Probab=26.65 E-value=3.6e+02 Score=22.12 Aligned_cols=28 Identities=11% Similarity=0.031 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhhhhhhc
Q psy15539 159 SVIMFCAGRLLTGFGGGSFAVVVPMYTA 186 (333)
Q Consensus 159 ~~~~~~~~~~l~G~~~g~~~~~~~~~~~ 186 (333)
+.+.++...++.|+......|....+..
T Consensus 61 ~~~~l~~~gf~lGf~~t~AEPal~vL~~ 88 (212)
T PF07556_consen 61 SLWLLLLFGFVLGFLVTIAEPALRVLAD 88 (212)
T ss_pred CcEEeHHHHHHHHHHHHhhCcHHHHHHH
Confidence 5567777888889888888888777654
No 356
>COG5547 Small integral membrane protein [Function unknown]
Probab=26.41 E-value=1.7e+02 Score=18.21 Aligned_cols=37 Identities=14% Similarity=0.051 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhh
Q psy15539 139 TMLLLAVPTLVGWGLIIWSQSVIMFCAGRLLTGFGGG 175 (333)
Q Consensus 139 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g 175 (333)
.++.+.+...++++++.+.---+.+++...+.|++.|
T Consensus 10 pIIgglvglliAili~t~GfwKtilviil~~lGv~iG 46 (62)
T COG5547 10 PIIGGLVGLLIAILILTFGFWKTILVIILILLGVYIG 46 (62)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444443332222233344444555444
No 357
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=25.31 E-value=2.1e+02 Score=25.90 Aligned_cols=100 Identities=11% Similarity=0.026 Sum_probs=41.0
Q ss_pred hhhhhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHH--H----HHhhHHHHHH
Q psy15539 92 GDRLIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLI--I----WSQSVIMFCA 165 (333)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~--~----~~~~~~~~~~ 165 (333)
.|.+... ..|. +.+...+.+...+...++.++-+. +.|.|..+.-|.....++.... + ...++.....
T Consensus 21 ~P~il~~--~~g~-~~~~~~li~at~l~sgi~Tllq~~---~~g~~lpl~~G~s~~~~~~~~~~~g~~~~~~~~~~~~~g 94 (389)
T PF00860_consen 21 VPLILAA--AFGL-DADTAALISATFLVSGIATLLQGL---PAGHRLPLVPGPSFAFIFAFMIVIGMAESGGYGLQAALG 94 (389)
T ss_dssp HHHTTTS--------------HHHHHHHHHHHHHHHHH---HTTT-----EEE-GGGHHHHHGGG-----HHHHHHHHHH
T ss_pred hHHHHhh--cccc-cchhhHHHHHHHHHHHHHHHHHHh---cCCCceecccccchhhhhhhhcccccccchhhchhhhhh
Confidence 4555554 1465 445557777778888888888887 7777776665544443332211 1 1223344444
Q ss_pred HHHHHhhhhhhhhhhh-hhhhcccCCCcchhhH
Q psy15539 166 GRLLTGFGGGSFAVVV-PMYTAEIAETEIRGTL 197 (333)
Q Consensus 166 ~~~l~G~~~g~~~~~~-~~~~~e~~~~~~rg~~ 197 (333)
+-++.|+..-...... ...+.+++|+..++..
T Consensus 95 ~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v 127 (389)
T PF00860_consen 95 AVLISGILFILLGLTGLRKRLRRLFPPVVKGAV 127 (389)
T ss_dssp HHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHhChhheEee
Confidence 4444444332221111 1255666776665553
No 358
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=25.27 E-value=3.6e+02 Score=24.54 Aligned_cols=94 Identities=10% Similarity=-0.003 Sum_probs=52.1
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHhhhhhhhhhh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVGWGLII-WSQSVIMFCAGRLLTGFGGGSFAVV 180 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~G~~~g~~~~~ 180 (333)
.|.+.++...+.....+...++.++-.+-.-++|.|..+..+.....+...... ....+.....+-++.|+..-... .
T Consensus 23 ~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~illg-~ 101 (406)
T TIGR03173 23 LGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVILLA-P 101 (406)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH-H
Confidence 588888888888888888888888875333357777666654433332222211 12234444444444444322222 2
Q ss_pred hhhhhcccCCCcchhh
Q psy15539 181 VPMYTAEIAETEIRGT 196 (333)
Q Consensus 181 ~~~~~~e~~~~~~rg~ 196 (333)
....+.+.+|+...|.
T Consensus 102 ~~~~l~~~iPp~v~G~ 117 (406)
T TIGR03173 102 FFSKLVRFFPPVVTGT 117 (406)
T ss_pred HHHHHHHHCCcHHHHH
Confidence 3445667777766554
No 359
>PRK10692 hypothetical protein; Provisional
Probab=25.24 E-value=2.2e+02 Score=19.45 Aligned_cols=19 Identities=37% Similarity=0.335 Sum_probs=11.1
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q psy15539 136 RKNTMLLLAVPTLVGWGLI 154 (333)
Q Consensus 136 rr~~l~~~~~~~~~~~~~~ 154 (333)
||...++|-++++++.+.+
T Consensus 3 Rk~a~~~GN~lMglGmv~M 21 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVM 21 (92)
T ss_pred chhhHHHhhHHHHHHHHHH
Confidence 5556666666666665543
No 360
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=24.15 E-value=4.2e+02 Score=21.97 Aligned_cols=47 Identities=13% Similarity=0.197 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc--cCChHHHHhcCCHHHHHHHHHHHh
Q psy15539 220 SVYGLSIICALLPIFFVGLMLLM--PESPQFHLKKNRVKQAKESLQWFR 266 (333)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~ 266 (333)
++.+.+++.+++..+.+..+.+- -|...+..-++..-.+...++.++
T Consensus 50 ~~~~~~~i~gi~~g~l~am~vl~rra~ra~Y~qieGqpGAa~avL~~lr 98 (224)
T PF13829_consen 50 GSWWYWLIIGILLGLLAAMIVLSRRAQRAAYAQIEGQPGAAGAVLDNLR 98 (224)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHhhc
Confidence 44455555555544433333222 222233334455556666666554
No 361
>COG2610 GntT H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism]
Probab=23.55 E-value=6e+02 Score=23.61 Aligned_cols=41 Identities=27% Similarity=0.481 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHHHHHHHHH---------HHhhhccchhHHHHHHHHHHH
Q psy15539 108 DLSFIGSSMALGAVFGSPVV---------GNLVDTVGRKNTMLLLAVPTL 148 (333)
Q Consensus 108 ~~~~~~~~~~~~~~i~~~~~---------g~l~dr~Grr~~l~~~~~~~~ 148 (333)
..+.+.-+..+|.++|.++- -.+.+++|.||....-.+...
T Consensus 58 tlg~i~~Vi~lGam~GkLle~sGaA~~IA~tii~~~G~kr~~~Al~l~g~ 107 (442)
T COG2610 58 TLGSLALVIGLGAMLGKLLEDSGAAESIADTLIRKFGEKRALLALVLAGL 107 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 45555666677777766543 357779999987654433333
No 362
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=23.26 E-value=5.8e+02 Score=23.34 Aligned_cols=31 Identities=10% Similarity=0.017 Sum_probs=26.6
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy15539 104 VTESDLSFIGSSMALGAVFGSPVVGNLVDTV 134 (333)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~ 134 (333)
.++++...+.+...+...++.++-+...++.
T Consensus 34 l~~~~~~~li~at~~~sgi~Tllq~~~~~~~ 64 (415)
T TIGR00801 34 LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQ 64 (415)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCc
Confidence 7888889999999999999999998877654
No 363
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=22.98 E-value=2.7e+02 Score=21.28 Aligned_cols=26 Identities=12% Similarity=0.204 Sum_probs=10.8
Q ss_pred HHHHHHHHHHhhccCccchHhhhcCh
Q psy15539 275 EITDMQNSLEKERSDKVPLMQAFSTP 300 (333)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (333)
+.++++.+++.+.+..-+..-+-++|
T Consensus 11 ~id~iN~~E~RDnkprFs~~Fi~~HP 36 (155)
T PF10777_consen 11 EIDRINREEKRDNKPRFSSSFIRNHP 36 (155)
T ss_pred HHHHHHHHhccCCCccccHHHHHhCc
Confidence 33444443333333334444444555
No 364
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=22.52 E-value=5e+02 Score=22.33 Aligned_cols=56 Identities=14% Similarity=-0.020 Sum_probs=32.9
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCCCcchhhHHHHHHHHHHHHHHHHHHHhHHH
Q psy15539 163 FCAGRLLTGFGGGSFAVVVPMYTAEIAETEIRGTLGTYFQLQCTAGILFVYAVGSWA 219 (333)
Q Consensus 163 ~~~~~~l~G~~~g~~~~~~~~~~~e~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~~ 219 (333)
.-..|.+.|+-.- .+...+++++-.||.+.+--..--...+.+++.++.+.++-.+
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777776653 3455788888888865543333333444455555566665555
No 365
>PLN02878 homogentisate phytyltransferase
Probab=22.11 E-value=5.2e+02 Score=22.31 Aligned_cols=20 Identities=15% Similarity=0.248 Sum_probs=14.6
Q ss_pred ccchhHHHHHHHHHHHHHHH
Q psy15539 133 TVGRKNTMLLLAVPTLVGWG 152 (333)
Q Consensus 133 r~Grr~~l~~~~~~~~~~~~ 152 (333)
|+|+|+...++..+..++..
T Consensus 195 ~lG~~~~~~i~~~ll~~aY~ 214 (280)
T PLN02878 195 RLGQKRVFWLCVNLLEMAYA 214 (280)
T ss_pred hhChHHHHHHHHHHHHHHHH
Confidence 78888888877766666655
No 366
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=21.93 E-value=64 Score=22.86 Aligned_cols=44 Identities=16% Similarity=-0.025 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHH
Q psy15539 107 SDLSFIGSSMALGAVFGSPVVGNLVDTVGRKNTMLLLAVPTLVG 150 (333)
Q Consensus 107 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 150 (333)
...|-..+++.-.+++.+++++++.|+.-.-+-=.+|..++.++
T Consensus 55 ~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G 98 (109)
T COG1742 55 AAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAG 98 (109)
T ss_pred hhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhc
Confidence 45677788888889999999999999887666655665555444
No 367
>KOG2765|consensus
Probab=21.40 E-value=5e+02 Score=23.47 Aligned_cols=14 Identities=7% Similarity=0.188 Sum_probs=10.6
Q ss_pred hhccchhHHHHHHH
Q psy15539 131 VDTVGRKNTMLLLA 144 (333)
Q Consensus 131 ~dr~Grr~~l~~~~ 144 (333)
.||+.-.|++....
T Consensus 208 ~e~ft~sKllav~~ 221 (416)
T KOG2765|consen 208 VERFTLSKLLAVFV 221 (416)
T ss_pred cchhhHHHHHHHHH
Confidence 89999888765533
No 368
>PRK04972 putative transporter; Provisional
Probab=21.31 E-value=7.4e+02 Score=23.84 Aligned_cols=21 Identities=10% Similarity=0.063 Sum_probs=12.6
Q ss_pred hhhhhhhhhhhhhhcccCCCc
Q psy15539 172 FGGGSFAVVVPMYTAEIAETE 192 (333)
Q Consensus 172 ~~~g~~~~~~~~~~~e~~~~~ 192 (333)
++.+...+....++.|....+
T Consensus 509 ~aG~~t~~~~l~~~~~~~~~~ 529 (558)
T PRK04972 509 IMGARTCAPAMEIISDTARSN 529 (558)
T ss_pred HhCCCCCcHHHHHHHhhcCCC
Confidence 344455566677777776543
No 369
>PRK14232 camphor resistance protein CrcB; Provisional
Probab=21.26 E-value=3.4e+02 Score=19.87 Aligned_cols=23 Identities=22% Similarity=0.026 Sum_probs=12.7
Q ss_pred HHHhhhhhhhhhhhhhhhcccCC
Q psy15539 168 LLTGFGGGSFAVVVPMYTAEIAE 190 (333)
Q Consensus 168 ~l~G~~~g~~~~~~~~~~~e~~~ 190 (333)
.+.+.|.-+.++...++..|...
T Consensus 61 ~~l~tGf~GgfTTFSTf~~e~~~ 83 (120)
T PRK14232 61 LLLGDGFLGAYTTFSTFMYEGFN 83 (120)
T ss_pred HHHHHHhcccchhHHHHHHHHHH
Confidence 33444444455666667777653
No 370
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=20.99 E-value=6.8e+02 Score=24.69 Aligned_cols=9 Identities=11% Similarity=0.442 Sum_probs=3.6
Q ss_pred hhccchhHH
Q psy15539 131 VDTVGRKNT 139 (333)
Q Consensus 131 ~dr~Grr~~ 139 (333)
..+..||..
T Consensus 394 l~~~s~rs~ 402 (700)
T COG1480 394 LRKMSRRSD 402 (700)
T ss_pred HhhhhhhHH
Confidence 334444433
No 371
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=20.74 E-value=2.3e+02 Score=17.64 Aligned_cols=39 Identities=18% Similarity=0.344 Sum_probs=18.2
Q ss_pred HHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhhcccCC
Q psy15539 207 AGILFVYAVGSWA----SVYGLSIICALLPIFFVGLMLLMPES 245 (333)
Q Consensus 207 ~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~e~ 245 (333)
+|.+++.+.+... +.....++..+.+++...+.-.+|++
T Consensus 13 l~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 13 LGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3444444444333 45555555555555544444444443
No 372
>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.
Probab=20.17 E-value=3.6e+02 Score=19.81 Aligned_cols=29 Identities=10% Similarity=0.009 Sum_probs=18.7
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHh
Q psy15539 102 FLVTESDLSFIGSSMALGAVFGSPVVGNL 130 (333)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l 130 (333)
.|++..+.+++.....+..++.+++..++
T Consensus 19 rGlT~~El~~~a~~~~~~g~~~gl~la~~ 47 (121)
T PF11990_consen 19 RGLTADELGLAAGVGFVAGLVVGLPLALL 47 (121)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888888777666655555555555444
No 373
>KOG4830|consensus
Probab=20.02 E-value=63 Score=27.57 Aligned_cols=42 Identities=14% Similarity=0.316 Sum_probs=30.1
Q ss_pred hhcCCcccccCchhHHHHHHHHHHHHHHHHHHHHHh---------hhccchhHH
Q psy15539 95 LIAGEYPFLVTESDLSFIGSSMALGAVFGSPVVGNL---------VDTVGRKNT 139 (333)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l---------~dr~Grr~~ 139 (333)
++++ .|.+++....++-+..+.-++..++.|.+ .||+|||+.
T Consensus 43 fltq---iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 43 FLTQ---IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred HHHH---hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 4455 77777777777777777777777777644 469999875
Done!