BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15542
(180 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VQX4|PNCB_DROME Nicotinate phosphoribosyltransferase OS=Drosophila melanogaster
GN=CG3714 PE=2 SV=2
Length = 555
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 127/201 (63%), Gaps = 47/201 (23%)
Query: 5 ILILSYLSSLFSQTIQDRASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYA 64
I S + L ++ I+ + +G DLL ++ R +S +LDV T+E+S+GELAA++SYA
Sbjct: 228 ITSFSSIGELKTRLIKHKQTGILEDLLEHAVRHRALLSHLLDVSTEESSEGELAAMVSYA 287
Query: 65 IAFPDGFMALVDTYDVKR------------------------------------------ 82
IAFPDGFMALVDTYDVKR
Sbjct: 288 IAFPDGFMALVDTYDVKRSGLLNFSAVALALNDLGYHALGIRIDSGDLAYLSCLARETFE 347
Query: 83 -----YNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYK 137
+ +PWF +L IVASNDINE+TILSLNEQGH+IDCFGIGTHLVTCQRQPALGCVYK
Sbjct: 348 KVAERFKVPWFNKLTIVASNDINEDTILSLNEQGHKIDCFGIGTHLVTCQRQPALGCVYK 407
Query: 138 LVEINGMPRIKLSQDVGKVAV 158
LVEING PRIKLSQDV KV +
Sbjct: 408 LVEINGQPRIKLSQDVEKVTM 428
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 7/61 (11%)
Query: 126 CQRQPALGCVYKLVEI------NGMPRIKLSQDVGKVAVSDHLYSFIHELWLQNAPIEEL 179
CQ+ P L V + V+I N R L+ KVAVSD+LY+FIH+LWLQNAPI EL
Sbjct: 496 CQQLPTLEQVREKVQISLKTLRNDHKRT-LNPTPYKVAVSDNLYNFIHDLWLQNAPIGEL 554
Query: 180 S 180
S
Sbjct: 555 S 555
>sp|Q95XX1|PNCB_CAEEL Nicotinate phosphoribosyltransferase OS=Caenorhabditis elegans
GN=Y54G2A.17 PE=2 SV=3
Length = 562
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 112/209 (53%), Gaps = 56/209 (26%)
Query: 3 SSILILSYLSSLFSQTIQDRASGQDADLLALSISWRNKISPILDVLT-----DEASDGEL 57
S I S + L + + + + + ADL +S+ R + +LD + E SDGEL
Sbjct: 229 SFICSFSSPAELKVRLLNHKITNEKADLFQISMEKR---AWLLDQFSWKAALSEVSDGEL 285
Query: 58 AALISYAIAFPDGFMALVDTYDVKRYNI-------------------------------- 85
+A ++YAIAFPD F+AL+DTYDV R +
Sbjct: 286 SAFVAYAIAFPDTFLALIDTYDVIRSGVVNFVAVSLALHDLGYRSMGCRIDSGDLSYLSK 345
Query: 86 ----------------PWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQ 129
+F ++ IVASNDINEETI+SLN+Q H I+ FG+GTHLVTCQ+Q
Sbjct: 346 ELRECFVKVSTLKGEYKFFEKMSIVASNDINEETIMSLNDQQHEINAFGVGTHLVTCQKQ 405
Query: 130 PALGCVYKLVEINGMPRIKLSQDVGKVAV 158
PALGCVYKLV + P+IKLSQDV K+ +
Sbjct: 406 PALGCVYKLVAQSAQPKIKLSQDVTKITI 434
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 155 KVAVSDHLYSFIHELWLQNAPIEEL 179
KV+VS+ LY F+H LWLQNAPI +L
Sbjct: 537 KVSVSERLYQFLHTLWLQNAPIGQL 561
>sp|Q55G10|PNCB_DICDI Nicotinate phosphoribosyltransferase OS=Dictyostelium discoideum
GN=naprt PE=2 SV=1
Length = 589
Score = 130 bits (326), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 101/192 (52%), Gaps = 54/192 (28%)
Query: 14 LFSQTIQDRASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMA 73
L +I+D +G +LL +S +R+++ L+ EL A ++YA FP+G +A
Sbjct: 271 LLDASIKD-TNGNVHNLLEMSQKYRDELGYTATNLS------ELVAFVAYARTFPNGLVA 323
Query: 74 LVDTYDV-----------------------------------------------KRYNIP 86
LVDTYD +++ I
Sbjct: 324 LVDTYDTLASGVPNFICVALALHQLGYKAVGIRLDSGDLSYLSKASRKLFKQIGEQFKID 383
Query: 87 WFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPR 146
+F + IVASND+NE TI++LN QGH ID F IGT+LVTCQ QPALGCVYKLVEING PR
Sbjct: 384 YFEKFSIVASNDLNEPTIIALNRQGHEIDVFAIGTNLVTCQAQPALGCVYKLVEINGSPR 443
Query: 147 IKLSQDVGKVAV 158
IKLSQ+ K+ +
Sbjct: 444 IKLSQEANKITL 455
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 155 KVAVSDHLYSFIHELWLQNAPIEELS 180
KV+V+ L+ +H LWL + PI+E+
Sbjct: 564 KVSVTKELFDTLHNLWLDSVPIKEMK 589
>sp|Q6P3H4|PNCB_DANRE Nicotinate phosphoribosyltransferase OS=Danio rerio GN=naprt1 PE=2
SV=2
Length = 546
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 47/200 (23%)
Query: 3 SSILILSYLSSLFSQTIQDRASGQDADLLALSISWRNKISPILDVLTDEASDGELAALIS 62
S I S L ++ QT++ G D + L ++ +L T+ +GELAA +S
Sbjct: 213 SYITSFSSLEEVWPQTLKPCGGGDSIDFICLVKGLLGRVCQLLGSKTNLIREGELAAFLS 272
Query: 63 YAIAFPDGFMALVDTYDV------------------------------------------ 80
YAIA+P F+ ++D+Y V
Sbjct: 273 YAIAYPQNFLPVIDSYSVRCSGLLCFCAVALALFELQYRPLGVRLDSGDLCRQSLDVRRV 332
Query: 81 -----KRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCV 135
K +++P F L IV +N I+E+++ LN++ + ID G+GTHLVTC RQP+LGCV
Sbjct: 333 FRECSKHFSVPQFESLIIVGTNSISEQSLSELNKKDNEIDVVGVGTHLVTCTRQPSLGCV 392
Query: 136 YKLVEINGMPRIKLSQDVGK 155
YKLVE+ G PR+KLS+D K
Sbjct: 393 YKLVEVRGRPRMKLSEDPEK 412
>sp|A5PK51|PNCB_BOVIN Nicotinate phosphoribosyltransferase OS=Bos taurus GN=NAPRT1 PE=2
SV=2
Length = 538
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 47/188 (25%)
Query: 25 GQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMALVDTYDVKR-- 82
G DL A W ++ L + E GE AA ++YA+AFP F L+DTY V+R
Sbjct: 237 GSQVDLAASVEMWLERVCGHLGLGVQEPHRGERAAFVAYALAFPRAFQGLLDTYSVRRSG 296
Query: 83 ---------------------------------------------YNIPWFAELQIVASN 97
+ +PW + I SN
Sbjct: 297 LPNFLAVALALQELGYQAVGVRLDSGDLLQQAREIRGVFRTAAAQFGVPWLQSVPIAVSN 356
Query: 98 DINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVA 157
+I+EE + L ++G ++ GIGT +VTC RQP+LGCVYKLV + G PR+KL++D K
Sbjct: 357 NIDEEELARLAQKGSEVNVIGIGTSVVTCPRQPSLGCVYKLVSVGGQPRMKLTEDPEKQT 416
Query: 158 VSDHLYSF 165
+ +F
Sbjct: 417 LPGSKAAF 424
>sp|Q8CC86|PNCB_MOUSE Nicotinate phosphoribosyltransferase OS=Mus musculus GN=Naprt1 PE=2
SV=1
Length = 538
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 47/190 (24%)
Query: 23 ASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMALVDTYDVKR 82
+ G DL A W ++ L + E GE AA ++YA+AFP F L+D+Y V+R
Sbjct: 235 SEGPTVDLPARVNLWLKRVCLYLGLEEQEPHPGERAAFVAYALAFPRAFQGLLDSYSVRR 294
Query: 83 -----------------------------------------------YNIPWFAELQIVA 95
+ +PW + I
Sbjct: 295 SGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAKEIRGIFRTAGAQFQMPWLESVPIAV 354
Query: 96 SNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGK 155
SN+I+E ++ L ++G ++ GIGT +VTC +QP++GCVYKLV + G PRIKL++D K
Sbjct: 355 SNNIDESELMRLAQKGSEVNVIGIGTSVVTCPKQPSMGCVYKLVSVGGQPRIKLTEDPEK 414
Query: 156 VAVSDHLYSF 165
+ +F
Sbjct: 415 QTLPGSKAAF 424
>sp|Q6XQN6|PNCB_HUMAN Nicotinate phosphoribosyltransferase OS=Homo sapiens GN=NAPRT1 PE=1
SV=2
Length = 538
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 85/188 (45%), Gaps = 47/188 (25%)
Query: 25 GQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMALVDTYDVKR-- 82
G DL A + W ++ L + E GE AA ++YA+AFP F L+DTY V R
Sbjct: 237 GPGVDLAAKAQVWLEQVCAHLGLGVQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSG 296
Query: 83 ---------------------------------------------YNIPWFAELQIVASN 97
+ +PW + IV SN
Sbjct: 297 LPNFLAVALALGELGYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSN 356
Query: 98 DINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVA 157
+I+EE + L ++G ++ GIGT +VTC +QP+LG VYKLV + G PR+KL++D K
Sbjct: 357 NIDEEALARLAQEGSEVNVIGIGTSVVTCPQQPSLGGVYKLVAVGGQPRMKLTEDPEKQT 416
Query: 158 VSDHLYSF 165
+ +F
Sbjct: 417 LPGSKAAF 424
>sp|Q6XQN1|PNCB_RAT Nicotinate phosphoribosyltransferase OS=Rattus norvegicus GN=Naprt1
PE=2 SV=1
Length = 538
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 47/190 (24%)
Query: 23 ASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMALVDTYDVKR 82
+ G DL A W + L + E GE AA ++YA+AFP F L+D+Y V+R
Sbjct: 235 SEGPAVDLPASVNLWLKHVCIYLGLEEREPHLGERAAFVAYALAFPRAFQGLLDSYSVRR 294
Query: 83 -----------------------------------------------YNIPWFAELQIVA 95
+ +PW + I
Sbjct: 295 SGLPNFLAVALALGELGYRAVGVRLDSGDLLQQAKEIRGIFRTVGAEFQMPWLEFVPIAV 354
Query: 96 SNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGK 155
SN+I+E+ + L ++G ++ GIGT++VTC +QP++GCVYKLV + G PRIKL+++ K
Sbjct: 355 SNNIDEKELARLAQKGSEVNVIGIGTNVVTCPKQPSMGCVYKLVSVGGQPRIKLTEESQK 414
Query: 156 VAVSDHLYSF 165
+ +F
Sbjct: 415 ETLPGSKAAF 424
>sp|O32090|PNCB_BACSU Nicotinate phosphoribosyltransferase OS=Bacillus subtilis (strain
168) GN=pncB PE=3 SV=1
Length = 490
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 88 FAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEING---- 143
F + +++AS+D++E TI++L QG RID +G+GT L+T QPALG VYKLV I
Sbjct: 285 FTDAKVIASSDLDEHTIMNLKAQGARIDVWGVGTKLITAYDQPALGAVYKLVAIEEDGKM 344
Query: 144 MPRIKLSQDVGKVAV 158
+ IK+S + KV
Sbjct: 345 VDTIKISSNPEKVTT 359
>sp|O53770|PNCB2_MYCTU Nicotinate phosphoribosyltransferase pncB2 OS=Mycobacterium
tuberculosis GN=pncB2 PE=2 SV=1
Length = 463
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 59/144 (40%), Gaps = 41/144 (28%)
Query: 51 EASDGELAALISYAIAFPDGFMALVDTYDV------------------------------ 80
+A D E+AA ++A +P M LVDTYD
Sbjct: 206 QAFDSEVAAFEAFARLYP-ATMLLVDTYDTLRGVDHVIELAKRLGNRFDVRAVRLDSGDL 264
Query: 81 --------KRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPAL 132
R + +++I AS+ ++E I +L ID FG+GT LV Q PAL
Sbjct: 265 DELSKATRARLDTAGLEQVEIFASSGLDENRIAALLAARCPIDGFGVGTQLVVAQDAPAL 324
Query: 133 GCVYKLVEINGMPRIKLSQDVGKV 156
YKLV +G R K S GKV
Sbjct: 325 DMAYKLVAYDGSGRTKFSS--GKV 346
>sp|Q10641|PNCB1_MYCTU Nicotinate phosphoribosyltransferase pncB1 OS=Mycobacterium
tuberculosis GN=pncB1 PE=3 SV=2
Length = 448
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 92 QIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLS 150
+IV S D++E +I +L +G +D +G+GT LVT P VYKLVE++G+P K S
Sbjct: 298 RIVVSGDLDEFSIAAL--RGEPVDSYGVGTSLVTGSGAPTANMVYKLVEVDGVPVQKRS 354
>sp|C6DFB8|PNCB_PECCP Nicotinate phosphoribosyltransferase OS=Pectobacterium carotovorum
subsp. carotovorum (strain PC1) GN=pncB PE=3 SV=1
Length = 401
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 93 IVASNDINEETILSLNEQ-GHRID-CFGIGTHLVTCQ--RQPALGCVYKLVEINGMPRIK 148
+V S+++N + L+L G R++ FGIGT L TC L V KLVE NG P K
Sbjct: 311 LVFSDNLNLDKALALYRHFGQRVNLVFGIGTRL-TCDIPGVKPLNIVIKLVECNGKPVAK 369
Query: 149 LSQDVGKVAVSDHLYSFIHEL 169
LS GK D +F+ EL
Sbjct: 370 LSDSPGKTICQDQ--NFVCEL 388
>sp|A4G168|PNCB_HERAR Nicotinate phosphoribosyltransferase OS=Herminiimonas
arsenicoxydans GN=pncB PE=3 SV=1
Length = 397
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 24/47 (51%)
Query: 117 FGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT+L PAL V KL+ NG P KLS GK D +
Sbjct: 337 FGIGTNLSNDTGIPALNIVMKLMACNGQPVAKLSDSAGKTLCRDETF 383
>sp|Q7NSK2|PNCB_CHRVO Nicotinate phosphoribosyltransferase OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=pncB PE=3 SV=1
Length = 402
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 22/47 (46%)
Query: 117 FGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGTH L V KLV NG P KLS GK SD +
Sbjct: 342 FGIGTHFTNDMGLEPLQIVLKLVSCNGQPVAKLSDSPGKTMCSDETF 388
>sp|B1JY80|PNCB_BURCC Nicotinate phosphoribosyltransferase OS=Burkholderia cenocepacia
(strain MC0-3) GN=pncB PE=3 SV=1
Length = 399
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 93 IVASNDINEETILSLNEQGHRIDC---FGIGTHLVTCQRQPALGCVYKLVEINGMPRIKL 149
+V S+ ++ ++ L E+ R C FG+GT+L L V K+V NG P KL
Sbjct: 307 LVFSDALDIPKVMQLYER-FRGRCKLAFGVGTNLTNDLGYVPLQIVIKMVRCNGQPVAKL 365
Query: 150 SQDVGKVAVSDHLY-SFIHELWLQNAPIEE 178
S GK D Y +++ +++ P+EE
Sbjct: 366 SDSPGKSMCDDKAYLAYLRQVFGIAQPVEE 395
>sp|B8D7P8|PNCB_BUCAT Nicotinate phosphoribosyltransferase OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain Tuc7) GN=pncB PE=3 SV=1
Length = 399
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 93 IVASNDINEETILSLNEQGHR-IDC-FGIGTHLVTCQ--RQPALGCVYKLVEINGMPRIK 148
++ S++++ + I+SL ++ H+ I+ FGIGT L TC L V KLVE NG P K
Sbjct: 311 LLFSDNLDFKKIISLYKKFHKKINVIFGIGTKL-TCDIPYVKPLNIVIKLVECNGKPVAK 369
Query: 149 LSQDVGKVAVSDHLY 163
+S GK D ++
Sbjct: 370 ISDSPGKTFCLDRIF 384
>sp|P57442|PNCB_BUCAI Nicotinate phosphoribosyltransferase OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=pncB PE=3 SV=1
Length = 399
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 93 IVASNDINEETILSLNEQGHR-IDC-FGIGTHLVTCQ--RQPALGCVYKLVEINGMPRIK 148
++ S++++ + I+SL ++ H+ I+ FGIGT L TC L V KLVE NG P K
Sbjct: 311 LLFSDNLDFKKIISLYKKFHKKINVIFGIGTKL-TCDIPYVKPLNIVIKLVECNGKPVAK 369
Query: 149 LSQDVGKVAVSDHLY 163
+S GK D ++
Sbjct: 370 ISDSPGKTFCLDRIF 384
>sp|B8D9E6|PNCB_BUCA5 Nicotinate phosphoribosyltransferase OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain 5A) GN=pncB PE=3 SV=1
Length = 399
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 93 IVASNDINEETILSLNEQGHR-IDC-FGIGTHLVTCQ--RQPALGCVYKLVEINGMPRIK 148
++ S++++ + I+SL ++ H+ I+ FGIGT L TC L V KLVE NG P K
Sbjct: 311 LLFSDNLDFKKIISLYKKFHKKINVIFGIGTKL-TCDIPYVKPLNIVIKLVECNGKPVAK 369
Query: 149 LSQDVGKVAVSDHLY 163
+S GK D ++
Sbjct: 370 ISDSPGKTFCLDRIF 384
>sp|Q8PSJ3|PNCB_METMA Nicotinate phosphoribosyltransferase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=pncB PE=3 SV=1
Length = 406
Score = 37.7 bits (86), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 93 IVASNDINEETILSLNEQGH-RIDC-FGIGTHLVT----CQRQPALGCVYKLVEINGMPR 146
IV S+ +N E + L + +I+C FGIGT L + P L V KL ING+P
Sbjct: 316 IVFSDALNAEAAVKLKKYCEGKINCSFGIGTSLTNNSEFFRESPPLNMVIKLHSINGIPV 375
Query: 147 IKLS 150
+KLS
Sbjct: 376 VKLS 379
>sp|C5BD56|PNCB_EDWI9 Nicotinate phosphoribosyltransferase OS=Edwardsiella ictaluri
(strain 93-146) GN=pncB PE=3 SV=1
Length = 401
Score = 37.7 bits (86), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 93 IVASNDINEETILSLNEQ-GHRID-CFGIGTHLVTCQR---QPALGCVYKLVEINGMPRI 147
+V S++++ L+L HRI+ FGIGT L TC +P L V KLVE NG P
Sbjct: 311 LVFSDNLDLPKALALYRHFHHRINLSFGIGTRL-TCDLPGVRP-LNIVIKLVECNGKPVA 368
Query: 148 KLSQDVGKVAVSD 160
KLS GK D
Sbjct: 369 KLSDSPGKTICQD 381
>sp|Q7N621|PNCB_PHOLL Nicotinate phosphoribosyltransferase OS=Photorhabdus luminescens
subsp. laumondii (strain TT01) GN=pncB PE=3 SV=1
Length = 404
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 93 IVASNDINEETILSLNEQGH-RIDC-FGIGTHLVTCQ--RQPALGCVYKLVEINGMPRIK 148
+V S+ ++ + L+L H RI+ FGIGT L TC L V KLVE NG P K
Sbjct: 314 LVFSDSLDFQKALALYRHFHNRINLIFGIGTQL-TCNIPGVKPLNIVIKLVECNGKPVAK 372
Query: 149 LSQDVGKVAVSDHLYSFIHEL 169
LS GK D+ F++ L
Sbjct: 373 LSDSPGKTICEDN--EFVNRL 391
>sp|Q8TMW6|PNCB_METAC Nicotinate phosphoribosyltransferase OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=pncB
PE=3 SV=1
Length = 404
Score = 37.4 bits (85), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 93 IVASNDINEETILSLNEQGH-RIDC-FGIGTHLVT----CQRQPALGCVYKLVEINGMPR 146
IV S+ +N E + L + +I+C FGIGT L + P L V KL +NG+P
Sbjct: 314 IVFSDALNAEAAIRLKKYCQDKINCSFGIGTSLTNNSEFFRESPPLNMVIKLHSVNGIPV 373
Query: 147 IKLS 150
+KLS
Sbjct: 374 VKLS 377
>sp|B5YT65|PNCB_ECO5E Nicotinate phosphoribosyltransferase OS=Escherichia coli O157:H7
(strain EC4115 / EHEC) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|Q8XDE8|PNCB_ECO57 Nicotinate phosphoribosyltransferase OS=Escherichia coli O157:H7
GN=pncB PE=3 SV=3
Length = 400
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|Q3Z3I9|PNCB_SHISS Nicotinate phosphoribosyltransferase OS=Shigella sonnei (strain
Ss046) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|Q83LN3|PNCB_SHIFL Nicotinate phosphoribosyltransferase OS=Shigella flexneri GN=pncB
PE=3 SV=4
Length = 400
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|Q31YR6|PNCB_SHIBS Nicotinate phosphoribosyltransferase OS=Shigella boydii serotype 4
(strain Sb227) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B6I904|PNCB_ECOSE Nicotinate phosphoribosyltransferase OS=Escherichia coli (strain
SE11) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|A7ZYN4|PNCB_ECOHS Nicotinate phosphoribosyltransferase OS=Escherichia coli O9:H4
(strain HS) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B7M860|PNCB_ECO8A Nicotinate phosphoribosyltransferase OS=Escherichia coli O8 (strain
IAI1) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B7LE31|PNCB_ECO55 Nicotinate phosphoribosyltransferase OS=Escherichia coli (strain
55989 / EAEC) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|A7ZK22|PNCB_ECO24 Nicotinate phosphoribosyltransferase OS=Escherichia coli O139:H28
(strain E24377A / ETEC) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|P18133|PNCB_ECOLI Nicotinate phosphoribosyltransferase OS=Escherichia coli (strain
K12) GN=pncB PE=1 SV=3
Length = 400
Score = 37.0 bits (84), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B1X8N5|PNCB_ECODH Nicotinate phosphoribosyltransferase OS=Escherichia coli (strain
K12 / DH10B) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|C4ZQ57|PNCB_ECOBW Nicotinate phosphoribosyltransferase OS=Escherichia coli (strain
K12 / MC4100 / BW2952) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B1LJT2|PNCB_ECOSM Nicotinate phosphoribosyltransferase OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B7NM43|PNCB_ECO7I Nicotinate phosphoribosyltransferase OS=Escherichia coli O7:K1
(strain IAI39 / ExPEC) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B7N398|PNCB_ECOLU Nicotinate phosphoribosyltransferase OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B7MS49|PNCB_ECO81 Nicotinate phosphoribosyltransferase OS=Escherichia coli O81
(strain ED1a) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B7MHP0|PNCB_ECO45 Nicotinate phosphoribosyltransferase OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B2TUE4|PNCB_SHIB3 Nicotinate phosphoribosyltransferase OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|Q8FJ98|PNCB_ECOL6 Nicotinate phosphoribosyltransferase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=pncB PE=3 SV=2
Length = 400
Score = 37.0 bits (84), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B7UN17|PNCB_ECO27 Nicotinate phosphoribosyltransferase OS=Escherichia coli O127:H6
(strain E2348/69 / EPEC) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|P22253|PNCB_SALTY Nicotinate phosphoribosyltransferase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=pncB PE=3 SV=2
Length = 400
Score = 37.0 bits (84), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|Q57QZ3|PNCB_SALCH Nicotinate phosphoribosyltransferase OS=Salmonella choleraesuis
(strain SC-B67) GN=pncB PE=3 SV=2
Length = 400
Score = 37.0 bits (84), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|A4W8V0|PNCB_ENT38 Nicotinate phosphoribosyltransferase OS=Enterobacter sp. (strain
638) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|Q8Z7Y9|PNCB_SALTI Nicotinate phosphoribosyltransferase OS=Salmonella typhi GN=pncB
PE=3 SV=3
Length = 400
Score = 37.0 bits (84), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B5F1U0|PNCB_SALA4 Nicotinate phosphoribosyltransferase OS=Salmonella agona (strain
SL483) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B4TRW6|PNCB_SALSV Nicotinate phosphoribosyltransferase OS=Salmonella schwarzengrund
(strain CVM19633) GN=pncB PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
>sp|B7LNU8|PNCB_ESCF3 Nicotinate phosphoribosyltransferase OS=Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=pncB
PE=3 SV=1
Length = 400
Score = 37.0 bits (84), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 117 FGIGTHLVTC---QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLY 163
FGIGT L TC Q +P L V KLVE NG P KLS GK D +
Sbjct: 336 FGIGTRL-TCDIPQVKP-LNIVIKLVECNGKPVAKLSDSPGKTICHDKAF 383
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,164,727
Number of Sequences: 539616
Number of extensions: 2471374
Number of successful extensions: 5121
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 5060
Number of HSP's gapped (non-prelim): 128
length of query: 180
length of database: 191,569,459
effective HSP length: 110
effective length of query: 70
effective length of database: 132,211,699
effective search space: 9254818930
effective search space used: 9254818930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)