Query psy15542
Match_columns 180
No_of_seqs 205 out of 1130
Neff 4.9
Searched_HMMs 29240
Date Fri Aug 16 23:59:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15542.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15542hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hl7_A Naprtase, nicotinate ph 100.0 1.2E-32 4E-37 251.3 5.8 112 49-160 234-399 (446)
2 3os4_A Naprtase, nicotinate ph 100.0 1.7E-32 6E-37 247.7 6.5 105 55-159 237-380 (407)
3 2im5_A Nicotinate phosphoribos 100.0 1.2E-32 4.2E-37 247.4 5.0 120 49-168 215-388 (394)
4 1yir_A Naprtase 2, nicotinate 100.0 2.3E-32 8E-37 246.5 4.9 111 55-165 242-395 (408)
5 1ybe_A Naprtase, nicotinate ph 100.0 3.2E-32 1.1E-36 248.3 4.5 114 56-170 269-430 (449)
6 1vlp_A Naprtase, nicotinate ph 100.0 3.2E-31 1.1E-35 241.3 6.6 112 49-160 246-414 (441)
7 2f7f_A Nicotinate phosphoribos 99.9 2.9E-28 1E-32 224.4 9.0 118 49-167 207-370 (494)
8 3dhf_A Nicotinamide phosphorib 99.9 1.1E-27 3.9E-32 220.3 8.0 118 48-165 248-435 (484)
9 2i14_A Nicotinate-nucleotide p 99.9 3.9E-23 1.3E-27 185.6 6.6 106 50-167 187-335 (395)
10 2i1o_A Nicotinate phosphoribos 99.9 3.8E-22 1.3E-26 179.4 7.5 105 50-166 191-337 (398)
11 2jbm_A Nicotinate-nucleotide p 99.2 8.3E-12 2.8E-16 108.3 2.5 95 49-149 176-298 (299)
12 3c2e_A Nicotinate-nucleotide p 98.8 1.4E-09 4.8E-14 94.1 4.1 87 49-140 178-294 (294)
13 3paj_A Nicotinate-nucleotide p 98.5 1.2E-07 4E-12 83.5 5.5 87 49-140 211-320 (320)
14 3gnn_A Nicotinate-nucleotide p 98.3 6.5E-07 2.2E-11 78.1 6.8 87 49-140 189-298 (298)
15 2b7n_A Probable nicotinate-nuc 98.3 2.5E-07 8.6E-12 78.9 2.4 84 49-138 161-272 (273)
16 1qap_A Quinolinic acid phospho 97.9 1.3E-05 4.4E-10 69.4 5.6 76 54-138 193-295 (296)
17 3tqv_A Nicotinate-nucleotide p 96.4 0.0035 1.2E-07 54.3 5.5 45 89-138 241-285 (287)
18 1qpo_A Quinolinate acid phosph 96.4 0.003 1E-07 54.4 4.9 45 89-138 240-284 (284)
19 3l0g_A Nicotinate-nucleotide p 95.5 0.019 6.6E-07 50.0 5.7 45 89-138 250-294 (300)
20 1x1o_A Nicotinate-nucleotide p 94.4 0.044 1.5E-06 47.1 4.9 46 90-140 240-285 (286)
21 1o4u_A Type II quinolic acid p 94.0 0.019 6.4E-07 49.5 1.7 46 89-139 239-284 (285)
22 2v82_A 2-dehydro-3-deoxy-6-pho 84.0 0.62 2.1E-05 36.6 2.8 35 90-126 148-182 (212)
23 3khj_A Inosine-5-monophosphate 83.4 1.9 6.6E-05 37.6 6.0 40 90-131 207-247 (361)
24 1y0e_A Putative N-acetylmannos 82.1 1.1 3.7E-05 35.2 3.6 34 90-125 175-209 (223)
25 1wa3_A 2-keto-3-deoxy-6-phosph 82.0 0.55 1.9E-05 36.6 1.8 36 88-125 148-183 (205)
26 1yxy_A Putative N-acetylmannos 79.3 1.4 4.6E-05 35.1 3.3 34 90-125 186-220 (234)
27 3f4w_A Putative hexulose 6 pho 77.0 1.3 4.4E-05 34.5 2.5 37 89-127 158-194 (211)
28 3tsm_A IGPS, indole-3-glycerol 74.1 4.3 0.00015 34.3 5.1 70 54-127 155-256 (272)
29 1yad_A Regulatory protein TENI 74.1 1.7 5.7E-05 34.3 2.4 35 90-126 164-198 (221)
30 3qja_A IGPS, indole-3-glycerol 73.7 3.1 0.0001 35.0 4.1 36 90-127 213-249 (272)
31 4fo4_A Inosine 5'-monophosphat 73.1 5 0.00017 35.2 5.5 40 90-131 211-251 (366)
32 2yw3_A 4-hydroxy-2-oxoglutarat 72.4 1.9 6.6E-05 34.5 2.4 36 88-125 149-184 (207)
33 3ffs_A Inosine-5-monophosphate 71.8 5 0.00017 35.8 5.2 41 90-132 246-287 (400)
34 1geq_A Tryptophan synthase alp 68.7 2.7 9.3E-05 33.5 2.6 35 90-126 191-226 (248)
35 1xi3_A Thiamine phosphate pyro 68.2 2.2 7.6E-05 32.9 1.9 35 90-126 162-196 (215)
36 3bw2_A 2-nitropropane dioxygen 66.5 5 0.00017 34.4 4.0 38 90-129 208-246 (369)
37 3igs_A N-acetylmannosamine-6-p 63.9 4.9 0.00017 32.7 3.2 34 90-125 181-215 (232)
38 3ibs_A Conserved hypothetical 63.6 37 0.0013 25.5 8.1 36 87-122 110-150 (218)
39 1rpx_A Protein (ribulose-phosp 63.5 3.6 0.00012 32.6 2.3 36 90-127 179-214 (230)
40 1ep3_A Dihydroorotate dehydrog 62.6 5.1 0.00017 32.9 3.1 35 90-126 241-276 (311)
41 2tps_A Protein (thiamin phosph 62.2 2.9 9.9E-05 32.7 1.5 35 90-126 172-206 (227)
42 3q58_A N-acetylmannosamine-6-p 62.1 5.4 0.00019 32.4 3.2 34 90-125 181-215 (229)
43 1h1y_A D-ribulose-5-phosphate 62.0 3.7 0.00013 32.7 2.2 36 90-127 173-208 (228)
44 4avf_A Inosine-5'-monophosphat 61.8 12 0.00041 33.7 5.7 40 90-131 332-372 (490)
45 1mxs_A KDPG aldolase; 2-keto-3 61.6 4.8 0.00016 32.8 2.8 36 87-125 163-199 (225)
46 3ajx_A 3-hexulose-6-phosphate 61.3 4.6 0.00016 31.2 2.5 36 90-127 158-193 (207)
47 1tqx_A D-ribulose-5-phosphate 60.1 7.6 0.00026 31.7 3.7 35 90-126 173-207 (227)
48 2fli_A Ribulose-phosphate 3-ep 58.5 5 0.00017 31.2 2.3 35 90-126 170-204 (220)
49 2zbt_A Pyridoxal biosynthesis 58.0 9.4 0.00032 31.5 4.0 31 94-126 213-244 (297)
50 3o63_A Probable thiamine-phosp 57.5 4.3 0.00015 33.5 1.8 37 89-127 190-226 (243)
51 1vc4_A Indole-3-glycerol phosp 57.2 5.6 0.00019 32.9 2.5 35 90-127 208-243 (254)
52 1wbh_A KHG/KDPG aldolase; lyas 57.1 6.4 0.00022 31.7 2.7 37 87-125 153-189 (214)
53 3ceu_A Thiamine phosphate pyro 57.1 5.1 0.00017 31.6 2.1 36 89-126 143-178 (210)
54 1vrd_A Inosine-5'-monophosphat 56.3 9.4 0.00032 33.9 4.0 40 90-131 340-380 (494)
55 1h5y_A HISF; histidine biosynt 56.0 9.6 0.00033 29.6 3.6 35 90-126 198-233 (253)
56 1vhc_A Putative KHG/KDPG aldol 55.0 7.1 0.00024 31.7 2.7 37 87-125 154-190 (224)
57 2xgg_A Microneme protein 2; A/ 54.8 15 0.00051 27.4 4.3 38 86-123 120-163 (178)
58 2gjl_A Hypothetical protein PA 54.8 10 0.00034 31.8 3.7 37 90-128 172-209 (328)
59 4e38_A Keto-hydroxyglutarate-a 53.9 7.7 0.00026 32.1 2.8 38 86-125 170-207 (232)
60 1n3y_A Integrin alpha-X; alpha 53.8 19 0.00064 26.8 4.8 37 87-123 109-152 (198)
61 3ctl_A D-allulose-6-phosphate 51.4 9.7 0.00033 31.1 3.0 35 90-126 167-202 (231)
62 1jcn_A Inosine monophosphate d 50.1 19 0.00065 32.2 4.9 39 90-130 358-397 (514)
63 3lab_A Putative KDPG (2-keto-3 50.0 9.9 0.00034 31.3 2.8 37 86-124 155-191 (217)
64 2z6i_A Trans-2-enoyl-ACP reduc 49.4 15 0.00051 31.0 3.9 38 90-129 162-200 (332)
65 2qr6_A IMP dehydrogenase/GMP r 47.9 22 0.00075 30.6 4.8 45 90-136 277-322 (393)
66 1ijb_A VON willebrand factor; 47.2 24 0.00083 26.8 4.6 36 87-122 114-157 (202)
67 3jr2_A Hexulose-6-phosphate sy 45.0 7.5 0.00026 30.7 1.3 34 90-125 166-199 (218)
68 1vzw_A Phosphoribosyl isomeras 44.8 13 0.00045 29.3 2.7 37 90-126 190-228 (244)
69 3bo9_A Putative nitroalkan dio 44.7 19 0.00064 30.4 3.8 38 90-129 176-214 (326)
70 1rd5_A Tryptophan synthase alp 43.7 18 0.0006 29.2 3.4 35 90-126 201-236 (262)
71 4a29_A Engineered retro-aldol 43.4 48 0.0016 28.0 6.1 38 88-127 203-240 (258)
72 3cu2_A Ribulose-5-phosphate 3- 41.9 30 0.001 28.3 4.6 35 90-126 187-223 (237)
73 3n2n_F Anthrax toxin receptor 41.7 25 0.00086 25.7 3.7 33 88-120 106-146 (185)
74 1eep_A Inosine 5'-monophosphat 41.7 23 0.0008 30.6 4.0 40 90-131 256-296 (404)
75 2b2x_A Integrin alpha-1; compu 41.1 28 0.00094 26.8 4.0 38 86-123 122-165 (223)
76 1mf7_A Integrin alpha M; cell 40.8 17 0.00059 27.2 2.7 36 88-123 106-148 (194)
77 2y88_A Phosphoribosyl isomeras 40.5 18 0.00061 28.4 2.9 37 90-126 193-231 (244)
78 1jub_A Dihydroorotate dehydrog 40.0 22 0.00075 29.3 3.5 34 90-125 242-276 (311)
79 3usb_A Inosine-5'-monophosphat 39.9 39 0.0013 30.5 5.4 40 90-131 359-399 (511)
80 1shu_X Anthrax toxin receptor 39.8 36 0.0012 24.8 4.4 35 87-121 102-144 (182)
81 2nv1_A Pyridoxal biosynthesis 39.3 25 0.00084 29.3 3.7 35 91-127 208-245 (305)
82 4hqo_A Sporozoite surface prot 38.6 32 0.0011 27.6 4.2 38 86-123 123-166 (266)
83 2w6r_A Imidazole glycerol phos 38.4 30 0.001 27.5 3.9 36 90-127 200-236 (266)
84 3inp_A D-ribulose-phosphate 3- 37.8 17 0.00057 30.2 2.4 35 91-127 196-230 (246)
85 1z41_A YQJM, probable NADH-dep 37.7 25 0.00085 29.8 3.5 37 90-127 277-314 (338)
86 4fxs_A Inosine-5'-monophosphat 37.2 39 0.0013 30.4 4.9 41 90-132 334-375 (496)
87 4hqf_A Thrombospondin-related 37.2 33 0.0011 27.6 4.0 36 87-122 127-168 (281)
88 3r2g_A Inosine 5'-monophosphat 37.1 79 0.0027 27.6 6.7 39 92-132 201-240 (361)
89 1v7p_C Integrin alpha-2; snake 37.1 34 0.0012 25.7 3.9 35 87-121 107-147 (200)
90 2e6f_A Dihydroorotate dehydrog 36.3 23 0.00079 29.2 3.0 35 89-125 243-278 (314)
91 1thf_D HISF protein; thermophI 36.2 30 0.001 27.3 3.5 35 90-126 195-230 (253)
92 1tqj_A Ribulose-phosphate 3-ep 36.2 15 0.0005 29.6 1.7 36 90-127 173-208 (230)
93 1pt6_A Integrin alpha-1; cell 36.2 36 0.0012 25.9 4.0 37 86-122 107-149 (213)
94 2qjg_A Putative aldolase MJ040 35.8 29 0.00099 27.8 3.5 36 90-127 202-244 (273)
95 4adt_A Pyridoxine biosynthetic 34.6 28 0.00097 29.6 3.4 33 93-127 212-245 (297)
96 3gr7_A NADPH dehydrogenase; fl 33.9 31 0.001 29.5 3.5 37 90-127 277-314 (340)
97 3b0p_A TRNA-dihydrouridine syn 33.8 26 0.00089 30.0 3.0 35 90-127 197-232 (350)
98 4b4t_W RPN10, 26S proteasome r 33.8 1.1E+02 0.0036 25.7 6.8 31 93-123 111-148 (268)
99 3hgj_A Chromate reductase; TIM 32.8 37 0.0013 29.0 3.8 37 90-127 288-325 (349)
100 4aaj_A N-(5'-phosphoribosyl)an 32.4 19 0.00063 29.5 1.8 39 72-110 149-193 (228)
101 3tdn_A FLR symmetric alpha-bet 31.9 9.7 0.00033 30.4 0.0 36 90-127 200-236 (247)
102 2c6q_A GMP reductase 2; TIM ba 31.6 93 0.0032 26.7 6.2 40 90-131 223-263 (351)
103 1atz_A VON willebrand factor; 31.0 63 0.0022 23.9 4.5 35 88-122 108-146 (189)
104 2gou_A Oxidoreductase, FMN-bin 30.8 38 0.0013 29.2 3.6 37 90-127 293-329 (365)
105 1pii_A N-(5'phosphoribosyl)ant 30.3 57 0.002 29.4 4.8 68 54-127 143-243 (452)
106 3hzh_A Chemotaxis response reg 29.9 1.4E+02 0.0048 20.8 7.1 66 46-112 60-134 (157)
107 1ka9_F Imidazole glycerol phos 29.5 45 0.0015 26.2 3.6 36 90-127 196-232 (252)
108 1f76_A Dihydroorotate dehydrog 29.4 37 0.0013 28.3 3.2 34 90-125 289-323 (336)
109 2b5x_A YKUV protein, TRXY; thi 29.1 1.3E+02 0.0045 20.2 5.8 53 56-108 77-140 (148)
110 3l5l_A Xenobiotic reductase A; 28.7 37 0.0013 29.2 3.1 37 90-127 295-332 (363)
111 3ovp_A Ribulose-phosphate 3-ep 28.5 31 0.0011 27.9 2.5 35 90-126 169-203 (228)
112 2r14_A Morphinone reductase; H 28.1 47 0.0016 28.8 3.7 37 90-127 299-335 (377)
113 4ab4_A Xenobiotic reductase B; 28.1 43 0.0015 29.1 3.5 36 91-127 280-315 (362)
114 3gka_A N-ethylmaleimide reduct 28.0 43 0.0015 29.1 3.5 36 91-127 288-323 (361)
115 1vyr_A Pentaerythritol tetrani 27.8 48 0.0016 28.5 3.7 37 90-127 294-330 (364)
116 1qo2_A Molecule: N-((5-phospho 27.6 58 0.002 25.6 3.9 38 90-127 188-230 (241)
117 2yxb_A Coenzyme B12-dependent 26.6 1.4E+02 0.0049 22.4 5.9 65 57-123 58-132 (161)
118 2x5n_A SPRPN10, 26S proteasome 25.6 66 0.0023 24.9 3.9 31 93-123 111-147 (192)
119 1v0l_A Endo-1,4-beta-xylanase 25.6 81 0.0028 26.5 4.7 76 57-142 152-238 (313)
120 3aty_A Tcoye, prostaglandin F2 25.0 53 0.0018 28.6 3.5 37 90-127 307-343 (379)
121 1gox_A (S)-2-hydroxy-acid oxid 24.8 49 0.0017 28.4 3.2 34 90-125 280-314 (370)
122 2hsa_B 12-oxophytodienoate red 24.6 53 0.0018 28.8 3.5 37 90-127 319-355 (402)
123 1i4n_A Indole-3-glycerol phosp 24.4 33 0.0011 28.5 1.9 34 91-127 203-237 (251)
124 1vhn_A Putative flavin oxidore 23.7 65 0.0022 26.8 3.7 37 90-127 183-220 (318)
125 1icp_A OPR1, 12-oxophytodienoa 23.5 58 0.002 28.2 3.5 37 90-127 301-337 (376)
126 3erw_A Sporulation thiol-disul 23.3 1.7E+02 0.0059 19.5 6.6 53 56-108 81-144 (145)
127 3kru_A NADH:flavin oxidoreduct 23.3 66 0.0023 27.6 3.8 38 90-128 277-315 (343)
128 2rhf_A DNA helicase RECQ; HRDC 23.2 58 0.002 21.6 2.7 41 28-70 5-45 (77)
129 1lu4_A Soluble secreted antige 22.6 1.7E+02 0.0059 19.3 7.5 64 46-109 55-132 (136)
130 1ta3_B Endo-1,4-beta-xylanase; 22.5 93 0.0032 26.0 4.4 60 57-126 153-212 (303)
131 2qv6_A MJ0145, GTP cyclohydrol 22.5 60 0.002 27.5 3.2 36 88-124 54-93 (268)
132 3niy_A Endo-1,4-beta-xylanase; 22.4 94 0.0032 26.7 4.5 74 57-142 173-258 (341)
133 2d1z_A Endo-1,4-beta-D-xylanas 22.4 97 0.0033 26.9 4.7 76 57-142 152-238 (436)
134 3rag_A Uncharacterized protein 22.0 1E+02 0.0035 25.6 4.6 34 88-121 9-48 (242)
135 1p0k_A Isopentenyl-diphosphate 21.9 70 0.0024 26.9 3.6 35 89-125 250-285 (349)
136 3lte_A Response regulator; str 21.5 1.8E+02 0.0062 19.1 7.2 59 52-112 35-102 (132)
137 3f6c_A Positive transcription 21.2 1.4E+02 0.0047 19.8 4.4 75 31-112 14-97 (134)
138 1w32_A Endo-1,4-beta-xylanase 21.2 1E+02 0.0035 26.3 4.5 75 57-142 162-249 (348)
139 1xm3_A Thiazole biosynthesis p 20.7 72 0.0025 26.0 3.3 36 90-127 178-214 (264)
140 1i1w_A Endo-1,4-beta-xylanase; 20.4 97 0.0033 25.7 4.1 59 57-125 154-212 (303)
141 3lor_A Thiol-disulfide isomera 20.4 2.2E+02 0.0075 19.6 6.3 55 55-109 80-151 (160)
No 1
>4hl7_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative; 1.80A {Vibrio cholerae}
Probab=99.97 E-value=1.2e-32 Score=251.32 Aligned_cols=112 Identities=28% Similarity=0.307 Sum_probs=102.3
Q ss_pred eeeec-------ccHHHHHHHHHHHCCCC-eEEeeeecccc---------------------------------ccCCCC
Q psy15542 49 TDEAS-------DGELAALISYAIAFPDG-FMALVDTYDVK---------------------------------RYNIPW 87 (180)
Q Consensus 49 ~~~~~-------~~E~~Af~aya~~fP~~-~i~LvDTYd~~---------------------------------~Ld~~g 87 (180)
++|+| ++|++||++|+++||++ +|+|+||||+. .||..|
T Consensus 234 ~i~~~~al~~~~~~e~~Af~~~~~~yp~~~~i~LvDTy~~~~fl~~~~~~~~~~~~GVR~DSGDp~~~~~k~r~~ld~~G 313 (446)
T 4hl7_A 234 WFMGHQALVNERDSQQVALERWLTAFDGMLAIAPTDTLTIDAFLNDFNRHLANAYDGVRHDSGCPFRWGDKMIAHYQQLG 313 (446)
T ss_dssp HHHHHHHHSCGGGHHHHHHHHHHHHCSSCCCEEESCSSCHHHHHHHCCHHHHHHSCEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHhhcccccCCCHHHHHHHHHHHCCCCCeEEEEEeCCcHHHHHHHHHHhcccccEEecCCCChHHHHHHHHHHHHHcC
Confidence 45666 89999999999999987 59999999988 677788
Q ss_pred CC-cee-EEEeCCCCHHHHHHHHH--cCCceeEeeeccccccCCC---------CCcceeEEEEeEEcCcceeeecCCCC
Q psy15542 88 FA-ELQ-IVASNDINEETILSLNE--QGHRIDCFGIGTHLVTCQR---------QPALGCVYKLVEINGMPRIKLSQDVG 154 (180)
Q Consensus 88 ~~-~vk-Iv~Sn~Lde~~i~~L~~--~g~~id~fGIGT~Lvt~~~---------~p~Lg~VyKLVei~G~P~~KlS~~~~ 154 (180)
++ ++| ||+||||||++|.+|.+ +++++|+|||||+|+|+.+ +||||||||||++||+|++|+|++++
T Consensus 314 ~~~~~K~Iv~SdgLde~~i~~L~~~~~~~~~d~FGVGT~L~~~~~~~~~~~~~~~~~l~~VyKLve~~G~P~~KlSd~~g 393 (446)
T 4hl7_A 314 IDPTTKLFIFSDGLDFDQALELCEYFAGRVKISFGIGTFLTNDLANWRNAAGVEYRPLSIVIKLAECQGRPVAKISDQPE 393 (446)
T ss_dssp CCGGGSEEEECSSCCHHHHHHHHHHHTTTSEEEEEECHHHHSCCTTCBCTTCCBCCCCEEEEEEEEETTEECCBCCSSGG
T ss_pred CCCCCcEEEEcCCCCHHHHHHHHHHhcCCCCcEEEeccceeccCcccccccccCCCCceeEEEEEEECCcceeEecCCcc
Confidence 85 785 99999999999999976 8899999999999999987 89999999999999999999999999
Q ss_pred cccCCc
Q psy15542 155 KVAVSD 160 (180)
Q Consensus 155 K~T~Pg 160 (180)
|+|++.
T Consensus 394 K~t~~d 399 (446)
T 4hl7_A 394 KAMCED 399 (446)
T ss_dssp GCBCSC
T ss_pred cccCCC
Confidence 999854
No 2
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis}
Probab=99.97 E-value=1.7e-32 Score=247.71 Aligned_cols=105 Identities=30% Similarity=0.325 Sum_probs=98.5
Q ss_pred cHHHHHHHHHHHCCCC-eEEeeeecccc---------------------------------ccCCCCCC--ceeEEEeCC
Q psy15542 55 GELAALISYAIAFPDG-FMALVDTYDVK---------------------------------RYNIPWFA--ELQIVASND 98 (180)
Q Consensus 55 ~E~~Af~aya~~fP~~-~i~LvDTYd~~---------------------------------~Ld~~g~~--~vkIv~Sn~ 98 (180)
+|++||++|+++||++ +++|+||||+. .||..|++ +++||+|||
T Consensus 237 ~e~~Af~~~~~~yp~~~~i~LvDTy~~~~~l~~~~~~~~~~~~GVR~DSGD~~~~~~k~r~~ld~~G~~p~~~~Ii~Sdg 316 (407)
T 3os4_A 237 SQRVALQVWLDEYPNQLGIALTDCITMDAFLRDFDLAFANRYQGLRHDSGDPIEWGEKAIAHYEKLGIDPMKKVLVFSDN 316 (407)
T ss_dssp HHHHHHHHHHHHCSSSSCEEECCSSCHHHHHHHCCHHHHHHSCEEEECSSCHHHHHHHHHHHHHHTTCCGGGSEEEECSS
T ss_pred cHHHHHHHHHHHCCCCCEEEEEeecChHHHHHHHHHHhcccCeEEEcCCCChHHHHHHHHHHHHHCCcCcCceEEEECCC
Confidence 8999999999999987 69999999987 67788886 578999999
Q ss_pred CCHHHHHHHHH--cCCceeEeeeccccccCCC-CCcceeEEEEeEEcCcceeeecCCCCcccCC
Q psy15542 99 INEETILSLNE--QGHRIDCFGIGTHLVTCQR-QPALGCVYKLVEINGMPRIKLSQDVGKVAVS 159 (180)
Q Consensus 99 Lde~~i~~L~~--~g~~id~fGIGT~Lvt~~~-~p~Lg~VyKLVei~G~P~~KlS~~~~K~T~P 159 (180)
|||++|.+|.+ +++++|+|||||+|+|+.+ +|+||||||||++||+|++|+|++++|+|++
T Consensus 317 Lde~~i~~l~~~~~~~~~d~fGVGT~L~~~~~~~~~l~~V~Klv~~~G~P~~KlSd~~~K~~~~ 380 (407)
T 3os4_A 317 LDLEKALFLYRHFYQRIKLVFGIGTRLTCDIPDVKPLNIVIKLVECNDKPVAKLSDSPGKTICQ 380 (407)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEEECHHHHSCCTTCCCCCEEEEEEEETTEECCCCCSSTTCCCCC
T ss_pred CCHHHHHHHHHHhcCCCCcEEeechheeeCCCCCCCcceEEEEEEECCcceeEecCCCccccCC
Confidence 99999999987 8899999999999999988 9999999999999999999999999999964
No 3
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis}
Probab=99.97 E-value=1.2e-32 Score=247.37 Aligned_cols=120 Identities=21% Similarity=0.252 Sum_probs=109.1
Q ss_pred eeeeccc-------HHHHHHHHHHHCCCC-eEEeeeecccc---------------------------------ccCCCC
Q psy15542 49 TDEASDG-------ELAALISYAIAFPDG-FMALVDTYDVK---------------------------------RYNIPW 87 (180)
Q Consensus 49 ~~~~~~~-------E~~Af~aya~~fP~~-~i~LvDTYd~~---------------------------------~Ld~~g 87 (180)
++|+|++ |++||++|++.||++ +++|+||||+. .||..|
T Consensus 215 ~i~~~~~~~~~~~~e~~A~~~~~~~~~~~l~i~LvDTyd~~~fl~~~~~~~~~~~~gVR~DSGD~~~~~~~~r~~ld~~G 294 (394)
T 2im5_A 215 WIQFHGAIYGYKMANYVAMEDWINVYDGDLGTVLTDTYTTDVFMRNFSKKHAMLFTSLRHDSGDPEIFIEKAVRRYEELR 294 (394)
T ss_dssp HHHHHHHHHCTTTHHHHHHHHHHHHHTTSSCEEECCTTCHHHHHHHCCHHHHHHCCEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred HHHHhccccccchHHHHHHHHHHHHcCCCCEEEEEEcCCCHHHHHHHHHHhhhcceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5666666 999999999999986 89999999994 677788
Q ss_pred CCc-ee-EEEeCCCCHHHHHHHHH--cCCceeEeeeccccccCCC--CCcceeEEEEeEEc------CcceeeecCCCCc
Q psy15542 88 FAE-LQ-IVASNDINEETILSLNE--QGHRIDCFGIGTHLVTCQR--QPALGCVYKLVEIN------GMPRIKLSQDVGK 155 (180)
Q Consensus 88 ~~~-vk-Iv~Sn~Lde~~i~~L~~--~g~~id~fGIGT~Lvt~~~--~p~Lg~VyKLVei~------G~P~~KlS~~~~K 155 (180)
+++ +| ||+||||||++|.+|.+ +|+++|+|||||+|+++.+ +|+||||||||++| |+|++|+|++++|
T Consensus 295 ~~~~~k~Ii~SdgLd~~~i~~l~~~~~g~~~d~FGvGT~L~~~~~~~~~~l~~V~Klv~~~~~~~~~g~p~~KlS~~~~K 374 (394)
T 2im5_A 295 VDPKIKYIIFSDSLTPQRAIEIQKLCAGRIKASFGIGTNLTNDVGGGVEPLNIVMKLWKCKMTAKDDWHYCVKLSDVDGK 374 (394)
T ss_dssp CCGGGCEEEECSSCCHHHHHHHHHHHTTTSEEEEEECHHHHSCCSTTCCCCCEEEEEEEEESSTTSCCEECCBCCSSTTC
T ss_pred cCcCccEEEEcCCCCHHHHHHHHHHhcCCCceEEEeCcccccCCCCCCCccceEeeeeeecccccCCCCceEEecCCCCC
Confidence 877 88 99999999999999999 8999999999999999888 89999999999998 9999999999999
Q ss_pred ccCCc-ceeeeeee
Q psy15542 156 VAVSD-HLYSFIHE 168 (180)
Q Consensus 156 ~T~Pg-~v~r~~~~ 168 (180)
+|+|. +|+|+...
T Consensus 375 ~t~p~k~v~r~~~~ 388 (394)
T 2im5_A 375 HTGEPEEILLAMNT 388 (394)
T ss_dssp CBSCHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHh
Confidence 99995 67776554
No 4
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2
Probab=99.97 E-value=2.3e-32 Score=246.53 Aligned_cols=111 Identities=26% Similarity=0.306 Sum_probs=97.5
Q ss_pred cHHHHHHHHHHHCCCC-eEEeeeecccc---------------------------------ccCCCCCCc-e-eEEEeCC
Q psy15542 55 GELAALISYAIAFPDG-FMALVDTYDVK---------------------------------RYNIPWFAE-L-QIVASND 98 (180)
Q Consensus 55 ~E~~Af~aya~~fP~~-~i~LvDTYd~~---------------------------------~Ld~~g~~~-v-kIv~Sn~ 98 (180)
+|++||++|++.||++ +++|+||||+. .||..|+++ + +||+|||
T Consensus 242 ~e~~A~~~~~~~~p~~~~i~LvDTyd~~~fl~~~~~~~~~~~~GVR~DSGD~~~~~~~~r~~ld~~G~~~~~K~Iv~Sdg 321 (408)
T 1yir_A 242 SQSAALDCWVREYRGLLGIALTDCITTDAFLRDFDLYFAKLFDGLRHDSGDPLLWAEKTIAHYLKLGIDPLTKTLVFSDG 321 (408)
T ss_dssp HHHHHHHHHHHHHTTSSCEEESCSSCHHHHHHHCCHHHHHHCCEEEECSSCHHHHHHHHHHHHHHHTCCGGGSEEEECSS
T ss_pred hHHHHHHHHHHHcCCCCeEEEEEeCCcHHHHHHHHHHhhhcceEEEeCCCCHHHHHHHHHHHHHHcCCCCCceEEEECCC
Confidence 8999999999999986 89999999994 677778866 7 5999999
Q ss_pred CCHHHHHHHHH--cCCceeEeeeccccccCC-CCCcceeEEEEeEEcCcceeeecCCCCccc--CCc--ceeee
Q psy15542 99 INEETILSLNE--QGHRIDCFGIGTHLVTCQ-RQPALGCVYKLVEINGMPRIKLSQDVGKVA--VSD--HLYSF 165 (180)
Q Consensus 99 Lde~~i~~L~~--~g~~id~fGIGT~Lvt~~-~~p~Lg~VyKLVei~G~P~~KlS~~~~K~T--~Pg--~v~r~ 165 (180)
|||++|.+|.+ +++++|+|||||+|+++. ++|+||||||||++||+|++|+|++++|+| .|| ++||.
T Consensus 322 Lde~~i~~l~~~~~~~~~d~FGVGT~L~~~~~~~~~l~~V~Klv~~nG~pv~K~S~~~~K~t~~~pg~~~~~r~ 395 (408)
T 1yir_A 322 LDLPRALKIYRALQGRINVSFGIGTHFTCDLPGVEPMNIVVKMSACNGHPVAKISDTPGKAQCRDPDFIHYLKH 395 (408)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEEECHHHHSCCTTCCCCCEEEEEEEETTEECCCCCSCC-------CHHHHHHHH
T ss_pred CCHHHHHHHHHHhcCCCceEEEeChhhccCCCCCCccceEEEEEEECCeeeEecCCCCCCcCCCCccceeeEee
Confidence 99999999999 899999999999999988 899999999999999999999999999999 698 55554
No 5
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2
Probab=99.97 E-value=3.2e-32 Score=248.32 Aligned_cols=114 Identities=18% Similarity=0.300 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHCCCC-eEEeeeecccc--------------------------------ccCCCCCC--ceeEEEeCCCC
Q psy15542 56 ELAALISYAIAFPDG-FMALVDTYDVK--------------------------------RYNIPWFA--ELQIVASNDIN 100 (180)
Q Consensus 56 E~~Af~aya~~fP~~-~i~LvDTYd~~--------------------------------~Ld~~g~~--~vkIv~Sn~Ld 100 (180)
|++||++|+++||++ +++|+||||+. .||..|++ +++||+|||||
T Consensus 269 e~~Af~~~~~~~p~~~~i~LvDTyd~~~fL~~~~~~~a~~~GVR~DSGDp~~~~~~~r~~ld~~G~~p~~~~Ii~SdgLd 348 (449)
T 1ybe_A 269 PYQVLKDWNRLYGGNLLIVLPDAFGTAAFLRNAPEWVADWTGFRPDSAPPIEGGEKIIEWWRKMGRDPRTKMLIFSDGLD 348 (449)
T ss_dssp HHHHHHHHHHHCCGGGCEECCCTTCHHHHHHTCCGGGGGSSEECCCSSCHHHHHHHHHHHHHHTTCCGGGSEEEECTTCC
T ss_pred HHHHHHHHHHHcCCCCEEEEEEeCCcHHHHHHHHHHHhccceEecCCCCHHHHHHHHHHHHHHcCCCcCceEEEEeCCCC
Confidence 999999999999986 89999999993 67778887 88999999999
Q ss_pred HHHHHHHHH--cCCceeEeeeccccccC---------CCCCcceeEEEEeEEcCcceeeecCCCCcccCCc--ceeeeee
Q psy15542 101 EETILSLNE--QGHRIDCFGIGTHLVTC---------QRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSD--HLYSFIH 167 (180)
Q Consensus 101 e~~i~~L~~--~g~~id~fGIGT~Lvt~---------~~~p~Lg~VyKLVei~G~P~~KlS~~~~K~T~Pg--~v~r~~~ 167 (180)
|++|.+|.+ +|+++|+|||||+|+++ .++|+||||||||++||+|++|+|++++|.| || +|+|++.
T Consensus 349 ~~~i~~l~~~~~g~~~d~FGVGT~L~~d~~~~~~~~~~~~~~l~~V~Klv~~nG~pv~K~S~~~~K~t-~g~k~v~r~~~ 427 (449)
T 1ybe_A 349 VDAIVDTYRHFEGRVRMSFGWGTNLTNDFAGCAPKTIASLKPISIVCKVSDANGRPAVKLSDNPQKAT-GDPAEVERYLK 427 (449)
T ss_dssp HHHHHHHHHHHTTTSEEEEEECHHHHCCCTTCCC-----CCCCCEEEEEEEETTEECCBCCSSGGGCB-SCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEeChhhccCcccccccccCCCCccceEEEEeeecCcceeecCCCCCCCC-CCHHHHHHHHh
Confidence 999999999 99999999999999994 4689999999999999999999999999999 88 6788766
Q ss_pred ehh
Q psy15542 168 ELW 170 (180)
Q Consensus 168 ~l~ 170 (180)
...
T Consensus 428 ~~g 430 (449)
T 1ybe_A 428 FFG 430 (449)
T ss_dssp HHC
T ss_pred hcC
Confidence 544
No 6
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2
Probab=99.97 E-value=3.2e-31 Score=241.33 Aligned_cols=112 Identities=25% Similarity=0.371 Sum_probs=103.1
Q ss_pred eeeeccc--------HHHHHHHHHHHCC-C-CeEEeeeecccc---------------------------------cc-C
Q psy15542 49 TDEASDG--------ELAALISYAIAFP-D-GFMALVDTYDVK---------------------------------RY-N 84 (180)
Q Consensus 49 ~~~~~~~--------E~~Af~aya~~fP-~-~~i~LvDTYd~~---------------------------------~L-d 84 (180)
++|+|++ |.+||++|++.|| + ++++|+||||+. .| |
T Consensus 246 ~i~~~~~~~~~~~~~e~~Af~~~~~~~p~~~~~i~LvDTyd~~~fL~~~~~~l~~~~~GVR~DSGDp~~~~~~~r~~l~d 325 (441)
T 1vlp_A 246 WVMGVASISEDYLHANKNAMDCWINTFGAKNAGLALTDTFGTDDFLKSFRPPYSDAYVGVRQDSGDPVEYTKKISHHYHD 325 (441)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHHHHHHHCGGGCCEEECCTTCHHHHHTTCCTTHHHHSCEEEECSSCHHHHHHHHHHHHHT
T ss_pred HHHHhcccccccchhHHHHHHHHHHHcCCCCCeEEEEEcCCcHHHHHHHHHHhhhcceEEEcCCCCHHHHHHHHHHHHHH
Confidence 4556655 9999999999999 6 789999999994 68 9
Q ss_pred CCCCCc-ee-EEEeCCCCHHHHHHHH---HcCCceeEeeeccccccCC--------CCCcceeEEEEeEEcCcceeeecC
Q psy15542 85 IPWFAE-LQ-IVASNDINEETILSLN---EQGHRIDCFGIGTHLVTCQ--------RQPALGCVYKLVEINGMPRIKLSQ 151 (180)
Q Consensus 85 ~~g~~~-vk-Iv~Sn~Lde~~i~~L~---~~g~~id~fGIGT~Lvt~~--------~~p~Lg~VyKLVei~G~P~~KlS~ 151 (180)
..|+++ +| ||+||||||++|.+|. ++++++|+|||||+|++|. ++|+||||||||++||+|++|+|+
T Consensus 326 ~~G~~~~~k~Ii~SdgLd~~~i~~l~~~~~~~~~~d~FGVGT~L~~~~~~~~~~~~~~~~l~~V~Klv~~nG~p~~KlS~ 405 (441)
T 1vlp_A 326 VLKLPKFSKIICYSDSLNVEKAITYSHAAKENGMLATFGIGTNFTNDFRKKSEPQVKSEPLNIVIKLLEVNGNHAIKISD 405 (441)
T ss_dssp TSCCCTTSSEEEECSSCCHHHHHHHHHHHHHTTCEEEEEECHHHHSCEECSSSTTSEECCCCEEEEEEEETTEECCBCCS
T ss_pred HcCCCCCceEEEEeCCCCHHHHHHHHHHHHcCCceEEEEeCchheecccccccccCCCCCcceEEEEEEECCeeeEEecC
Confidence 999988 89 9999999999999999 6889999999999999965 589999999999999999999999
Q ss_pred CCCcccCCc
Q psy15542 152 DVGKVAVSD 160 (180)
Q Consensus 152 ~~~K~T~Pg 160 (180)
+++|+|+|.
T Consensus 406 ~~~K~t~~~ 414 (441)
T 1vlp_A 406 NLGKNMGDP 414 (441)
T ss_dssp STTCCBSCH
T ss_pred CCCCccCCH
Confidence 999999995
No 7
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=99.95 E-value=2.9e-28 Score=224.40 Aligned_cols=118 Identities=40% Similarity=0.624 Sum_probs=110.4
Q ss_pred eeeecccHHHHHHHHHHHCCCCeEEeeeecccc---------------------------------------ccCCCCCC
Q psy15542 49 TDEASDGELAALISYAIAFPDGFMALVDTYDVK---------------------------------------RYNIPWFA 89 (180)
Q Consensus 49 ~~~~~~~E~~Af~aya~~fP~~~i~LvDTYd~~---------------------------------------~Ld~~g~~ 89 (180)
++|+|++|.+||++|++.||+ +++|+||||++ .|+..|++
T Consensus 207 ~i~~~g~~~~A~~~~~~~~p~-~~vlvDT~d~l~~gv~~al~~~~~l~~~~~~~gIRlDSgd~~~l~~~~r~~ld~~G~~ 285 (494)
T 2f7f_A 207 LVQSYGNDYEAFMAYAKTHRD-CVFLVDTYDTLKAGVPSAIRVAREMGDKINFLGVRIDSGDMAYISKRVREQLDEAGFT 285 (494)
T ss_dssp HHHHHTSHHHHHHHHHHHCSE-EEEECCSSCTTTTHHHHHHHHHHHHGGGSEEEEEEECSSCHHHHHHHHHHHHHHTTCT
T ss_pred HHHhcccHHHHHHHHHHHCCC-EEEEEccchHhhhhHHHHHHHHHHhhhhcCCeEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 567889999999999999999 99999999861 46667888
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCCCCCcceeEEEEeEE---cCc--ceeeecCCCCcccCCc--ce
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEI---NGM--PRIKLSQDVGKVAVSD--HL 162 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKLVei---~G~--P~~KlS~~~~K~T~Pg--~v 162 (180)
+++|++|||||+++|.+|.++|+++++|||||+|+++..+|++|+|||||++ ||+ |++|+|++++|.|.|| +|
T Consensus 286 ~~kI~aSggld~~~i~~l~~~G~~~~sfGvGT~Lt~~~~~~~ld~v~Klv~~~~~~G~~~pv~K~s~~~~K~s~pG~k~v 365 (494)
T 2f7f_A 286 EAKIYASNDLDENTILNLKMQKSKIDVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIKLSSNAEKVTTPGKKQV 365 (494)
T ss_dssp TCEEEECSSCCHHHHHHHHHTTCCCCEEEECHHHHTTTTSCCCCCEEEEEEEECTTSSEEECCCCCSSTTSSCCCSCEEE
T ss_pred ceEEEEECCCCHHHHHHHHHcCCCEEEEecCcccccCCCCCcccEEEEEEEEEcCCCcCccccccCCCCCCcCCCCceEE
Confidence 9999999999999999999999999999999999999999999999999999 999 9999999999999999 78
Q ss_pred eeeee
Q psy15542 163 YSFIH 167 (180)
Q Consensus 163 ~r~~~ 167 (180)
||++.
T Consensus 366 ~R~~~ 370 (494)
T 2f7f_A 366 WRITR 370 (494)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 89874
No 8
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A*
Probab=99.94 E-value=1.1e-27 Score=220.27 Aligned_cols=118 Identities=22% Similarity=0.280 Sum_probs=103.8
Q ss_pred ceeeec--ccHHHHHHHHHHHCCCCeE-Eeeeecccc------------------------------------------c
Q psy15542 48 LTDEAS--DGELAALISYAIAFPDGFM-ALVDTYDVK------------------------------------------R 82 (180)
Q Consensus 48 ~~~~~~--~~E~~Af~aya~~fP~~~i-~LvDTYd~~------------------------------------------~ 82 (180)
+++|+| ++|++||++|++.||++.+ +|+||||+. .
T Consensus 248 s~i~~~g~~~E~~Af~~~~~~~p~~~~~~L~DTyd~~~~~~~~~~~~l~~~i~~~~~~~~lgVR~DSGD~~~~~~~vr~~ 327 (484)
T 3dhf_A 248 STITAWGKDHEKDAFEHIVTQFSSVPVSVVSDSYDIYNACEKIWGEDLRHLIVSRSTQAPLIIRPDSGNPLDTVLKVLEI 327 (484)
T ss_dssp HHHHTTCGGGHHHHHHHHHHHTSSSCEEEECCSSCHHHHHHTCCCCCTHHHHTTSCTTSCEEEECCSSCHHHHHHHHHHH
T ss_pred HHHHhcCCchHHHHHHHHHHHCCCCCEEEEEeccChHHHHHHHHHHHHHHHHhhhccCCcEEEECCCCChHHHHHHHHHH
Confidence 356677 6999999999999998754 899999974 1
Q ss_pred cCC--------CCC---C-ceeEEEeCCCCHHH----HHHHHHcCCceeE--eeeccccccCCCCCcceeEEE--EeEEc
Q psy15542 83 YNI--------PWF---A-ELQIVASNDINEET----ILSLNEQGHRIDC--FGIGTHLVTCQRQPALGCVYK--LVEIN 142 (180)
Q Consensus 83 Ld~--------~g~---~-~vkIv~Sn~Lde~~----i~~L~~~g~~id~--fGIGT~Lvt~~~~p~Lg~VyK--LVei~ 142 (180)
|+. .|+ + +++||+||||||++ |++|+++|+++|. |||||+|+++.++|+||+||| +|++|
T Consensus 328 Ld~~fG~~~n~~G~kvl~~~~~Ii~Sd~Lde~~~~~ii~~l~~~G~~~d~v~fGvGT~L~~~~~~~~l~~v~K~~~v~~~ 407 (484)
T 3dhf_A 328 LGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENIAFGSGGGLLQKLTRDLLNCSFKCSYVVTN 407 (484)
T ss_dssp HHHHSCCEECTTSCEECCTTEEEEECSSCSHHHHHHHHHHHHHTTBCGGGEEEEESHHHHTSCCTTTTTEEEEEEEEEET
T ss_pred HHHHhCCcccccccccCCCCEEEEEcCCCCHHHHHHHHHHHHhCCCCcccceEcccCccccCCCCCCCCEEEEEEEEEEC
Confidence 233 677 7 79999999999999 8888899999997 999999999999999999999 88999
Q ss_pred C--cceeeecC-CCCcccCCc--ceeee
Q psy15542 143 G--MPRIKLSQ-DVGKVAVSD--HLYSF 165 (180)
Q Consensus 143 G--~P~~KlS~-~~~K~T~Pg--~v~r~ 165 (180)
| +|++|+|. +++|.|.|| +|||+
T Consensus 408 G~~~pv~K~s~td~~K~S~pG~k~v~r~ 435 (484)
T 3dhf_A 408 GLGINVFKDPVADPNKRSKKGRLSLHRT 435 (484)
T ss_dssp TEEEECCCCCTTCGGGCCCCSSCEEEEC
T ss_pred CccceeeecCCCCCCccCCCcceEEEEe
Confidence 9 79999994 689999999 78885
No 9
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=99.87 E-value=3.9e-23 Score=185.57 Aligned_cols=106 Identities=21% Similarity=0.360 Sum_probs=93.1
Q ss_pred eeecccHHHHHHHHHHHCCCC--eEEeeeecccc---------------------------------------ccCCCCC
Q psy15542 50 DEASDGELAALISYAIAFPDG--FMALVDTYDVK---------------------------------------RYNIPWF 88 (180)
Q Consensus 50 ~~~~~~E~~Af~aya~~fP~~--~i~LvDTYd~~---------------------------------------~Ld~~g~ 88 (180)
+++|++|.+||++|++.||++ .++|+||||+. .||..|+
T Consensus 187 i~~~g~~~~A~~~~~~~~p~~~~~~vlvDT~d~~~~~al~~~~~~~~~~d~IrlDs~~~~~gd~~~~v~~~r~~ld~~G~ 266 (395)
T 2i14_A 187 IITVGDQVKAWKYFDEVIEEEVPRIALVDTFYDEKVEAVMAAEALGKKLFAVRLDTPSSRRGNFRKIIEEVRWELKVRGY 266 (395)
T ss_dssp HHHHTCHHHHHHHHHHHSCSSSCCEEECCSSBCHHHHHHHHHTTTGGGCCEEEECCCTTTCSCHHHHHHHHHHHHHHTTC
T ss_pred HHhcCCHHHHHHHHHHhCCCCccEEEEeccchHHHHHHHHHHHHhccCCcEEEeCCCCCCcccHHHHHHHHHHHHHhCCC
Confidence 388899999999999999975 89999999753 2333478
Q ss_pred CceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCCCCCcceeEEEEeEEcCcceeeecCCCCcccCCc--ceeeee
Q psy15542 89 AELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSD--HLYSFI 166 (180)
Q Consensus 89 ~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKLVei~G~P~~KlS~~~~K~T~Pg--~v~r~~ 166 (180)
++++|++|||||+++|.+|.++ +|+|||||++. .+|++|+||||+++||+|++|+|+ .|| ++||++
T Consensus 267 ~~~~I~aSggl~~~~i~~l~~~---vD~~gvGt~l~---~~~~ld~~~klv~~~g~p~~K~s~------~pG~k~~~R~~ 334 (395)
T 2i14_A 267 DWVKIFVSGGLDEEKIKEIVDV---VDAFGVGGAIA---SAKPVDFALDIVEVEGKPIAKRGK------LSGRKQVYRCE 334 (395)
T ss_dssp CSCEEEEESSCCHHHHHTTGGG---CSEEEECHHHH---TCCCCCCEEEEEEETTEECCCTTS------CCSCEEEEEET
T ss_pred CceEEEEECCCCHHHHHHHHHh---CCEEEeCcccC---CCCCccEEEEEEEeCCcceeeecC------CCCceEEEEEc
Confidence 8899999999999999999997 89999999997 489999999999999999999994 466 788886
Q ss_pred e
Q psy15542 167 H 167 (180)
Q Consensus 167 ~ 167 (180)
.
T Consensus 335 ~ 335 (395)
T 2i14_A 335 N 335 (395)
T ss_dssp T
T ss_pred C
Confidence 3
No 10
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=99.86 E-value=3.8e-22 Score=179.40 Aligned_cols=105 Identities=23% Similarity=0.356 Sum_probs=91.3
Q ss_pred eeecccHHHHHHHHHHHCCCC--eEEeeeecccc--------------------------------------ccCCCCCC
Q psy15542 50 DEASDGELAALISYAIAFPDG--FMALVDTYDVK--------------------------------------RYNIPWFA 89 (180)
Q Consensus 50 ~~~~~~E~~Af~aya~~fP~~--~i~LvDTYd~~--------------------------------------~Ld~~g~~ 89 (180)
+++|++ .+||++|++.||++ .++|+||||+. .||..|++
T Consensus 191 i~~~g~-~~A~~~~~~~~p~~~~~~vlvDT~d~~~~~al~~a~~l~~~d~IrlDs~~~~~gd~~~~v~~v~~~ld~~G~~ 269 (398)
T 2i1o_A 191 SIMLGD-EEAWKLTLENTKNGQKSVLLIDTYMDEKFAAIKIAEMFDKVDYIRLDTPSSRRGNFEALIREVRWELALRGRS 269 (398)
T ss_dssp HHHHCH-HHHHHHHHHTCCTTSCCEEECCSSSCHHHHHHHHHTTCSCCCEEEECCCGGGCSCHHHHHHHHHHHHHHTTCT
T ss_pred HHhcCC-HHHHHHHHHhCCCCCCEEEEEcCchHHHHHHHHHHHhhcCCcEEEeCCCCCCcccHHHHHHHHHHHHHhCCCC
Confidence 377777 99999999999975 89999999732 23444788
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCCCCCcceeEEEEeEEcCcceeeecCCCCcccCCc--ceeeee
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSD--HLYSFI 166 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKLVei~G~P~~KlS~~~~K~T~Pg--~v~r~~ 166 (180)
+++|++|||||+++|.+|.++|+ |+|||||++. .+|++++||||+++||+|++|+|+ .|| ++||++
T Consensus 270 ~~~I~aSggl~~~~i~~l~~~Gv--D~~gvGt~l~---~~~~ld~~~Klv~~~g~p~~K~s~------~pG~k~~~r~~ 337 (398)
T 2i1o_A 270 DIKIMVSGGLDENTVKKLREAGA--EAFGVGTSIS---SAKPFDFAMDIVEVNGKPETKRGK------MSGRKNVLRCT 337 (398)
T ss_dssp TSEEEEESSCCHHHHHHHHHTTC--CEEEECHHHH---TCCCCCEEEEEEEETTEECCCTTS------CCSCEEEEEET
T ss_pred ceEEEEeCCCCHHHHHHHHHcCC--CEEEeCcccC---CCCCccEEEEEEEeCCcceEeecC------CCCceEEEEEc
Confidence 89999999999999999999885 9999999997 379999999999999999999994 466 789886
No 11
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=99.15 E-value=8.3e-12 Score=108.28 Aligned_cols=95 Identities=20% Similarity=0.156 Sum_probs=70.9
Q ss_pred eeeecccHHHHHHHHHHHCCC--CeEEeeeecccc--------------------------ccCCCCCCceeEEEeCCCC
Q psy15542 49 TDEASDGELAALISYAIAFPD--GFMALVDTYDVK--------------------------RYNIPWFAELQIVASNDIN 100 (180)
Q Consensus 49 ~~~~~~~E~~Af~aya~~fP~--~~i~LvDTYd~~--------------------------~Ld~~g~~~vkIv~Sn~Ld 100 (180)
+++.++++.+|++++.+.+|. ..++.+||++.. .++ .++++++|.+|||+|
T Consensus 176 Hi~~~g~~~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~~~~~l~~~v~~l~-~~~~~~~I~ASGGIt 254 (299)
T 2jbm_A 176 HVVAAGGVEKAVRAARQAADFALKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLK-AQFPSVAVEASGGIT 254 (299)
T ss_dssp HHHHHTSHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHH-HHCTTSEEEEESSCC
T ss_pred HHHHcCCHHHHHHHHHHhCCcCCeEEEecCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhh-ccCCCeeEEEECCCC
Confidence 345567788899999888885 467888888654 222 246679999999999
Q ss_pred HHHHHHHHHcCCceeEeeeccccccCCCCCcceeEEEEeEEcCcceeee
Q psy15542 101 EETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKL 149 (180)
Q Consensus 101 e~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKLVei~G~P~~Kl 149 (180)
++.|.++.+.| +|.+|||+.+ .++|+++++||+++++|+|++|+
T Consensus 255 ~~ni~~~~~aG--aD~i~vGs~i---~~a~~~D~s~~i~~~~g~p~~K~ 298 (299)
T 2jbm_A 255 LDNLPQFCGPH--IDVISMGMLT---QAAPALDFSLKLFAKEVAPVPKI 298 (299)
T ss_dssp TTTHHHHCCTT--CCEEECTHHH---HSCCCCCEEEEEEEEC-------
T ss_pred HHHHHHHHHCC--CCEEEEChhh---cCCCCcceEEEEEEeCCcccccc
Confidence 99999999877 5999999954 34699999999999999999997
No 12
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=98.84 E-value=1.4e-09 Score=94.07 Aligned_cols=87 Identities=13% Similarity=0.009 Sum_probs=61.7
Q ss_pred eeeecccHHHHHHHHHHHCCC--CeEEeeeecccc--------------------------ccCCC--CCCceeEEEeCC
Q psy15542 49 TDEASDGELAALISYAIAFPD--GFMALVDTYDVK--------------------------RYNIP--WFAELQIVASND 98 (180)
Q Consensus 49 ~~~~~~~E~~Af~aya~~fP~--~~i~LvDTYd~~--------------------------~Ld~~--g~~~vkIv~Sn~ 98 (180)
+++.++++.+|++++++.+|. ..++++||++.. .++.. |+++++|++|||
T Consensus 178 h~~~~g~i~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~~~~~l~~~v~~l~~~~~g~~~v~I~ASGG 257 (294)
T 3c2e_A 178 HIWATGSITNAVKNARAVCGFAVKIEVECLSEDEATEAIEAGADVIMLDNFKGDGLKMCAQSLKNKWNGKKHFLLECSGG 257 (294)
T ss_dssp HHHHHSSHHHHHHHHHHHHCTTSCEEEECSSSHHHHHHHHHTCSEEECCC---------------------CCEEEEECC
T ss_pred hhhhcCCHHHHHHHHHHhcCcCCeEEEecCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhcccccCCCCeEEEEECC
Confidence 445567788999999999985 578899999655 34444 678899999999
Q ss_pred CCHHHHHHHHHcCCceeEeeeccccccCCCCCcceeEEEEeE
Q psy15542 99 INEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVE 140 (180)
Q Consensus 99 Lde~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKLVe 140 (180)
+|++.|.++.+.| +|.+|||+.+ ..+|+++++||++|
T Consensus 258 It~~ni~~~~~~G--vD~i~vGs~i---~~a~~~D~s~~i~~ 294 (294)
T 3c2e_A 258 LNLDNLEEYLCDD--IDIYSTSSIH---QGTPVIDFSLKLAH 294 (294)
T ss_dssp CCC------CCCS--CSEEECGGGT---SSCCCCCEEEEECC
T ss_pred CCHHHHHHHHHcC--CCEEEEechh---cCCCCCceEEEEeC
Confidence 9999999999877 5999999985 45799999999985
No 13
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=98.48 E-value=1.2e-07 Score=83.50 Aligned_cols=87 Identities=16% Similarity=0.131 Sum_probs=68.8
Q ss_pred eeeecccHHHHHHHHHHHCCCC-eEEeeeecccc-----------ccCCCC-----------CCceeEEEeCCCCHHHHH
Q psy15542 49 TDEASDGELAALISYAIAFPDG-FMALVDTYDVK-----------RYNIPW-----------FAELQIVASNDINEETIL 105 (180)
Q Consensus 49 ~~~~~~~E~~Af~aya~~fP~~-~i~LvDTYd~~-----------~Ld~~g-----------~~~vkIv~Sn~Lde~~i~ 105 (180)
++...++..+|++++.+.+|+. ..++|||++.. +||--. -++++|.+|||+|+++|.
T Consensus 211 Hi~~~G~i~~Av~~ar~~~p~~kIeVEVdtldea~eAl~aGaD~I~LDn~~~~~l~~av~~l~~~v~ieaSGGIt~~~I~ 290 (320)
T 3paj_A 211 HIIACGGIRQAISTAKQLNPGKPVEVETETLAELEEAISAGADIIMLDNFSLEMMREAVKINAGRAALENSGNITLDNLK 290 (320)
T ss_dssp HHHHHTSHHHHHHHHHHHSTTSCEEEEESSHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHTTSSEEEEESSCCHHHHH
T ss_pred HHHHhCCHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhCCCCeEEEECCCCHHHHH
Confidence 4555678899999999999974 67899999765 111100 047899999999999999
Q ss_pred HHHHcCCceeEeeeccccccCCCCCcceeEEEEeE
Q psy15542 106 SLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVE 140 (180)
Q Consensus 106 ~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKLVe 140 (180)
++.+.| +|.|+||+ |+ ...|++++.+|++|
T Consensus 291 ~~a~tG--VD~isvGa-lt--~sa~~lD~sl~i~~ 320 (320)
T 3paj_A 291 ECAETG--VDYISVGA-LT--KHLKALDLSMRFKS 320 (320)
T ss_dssp HHHTTT--CSEEECTH-HH--HSBCCCCEEEEECC
T ss_pred HHHHcC--CCEEEECc-ee--cCCCcceeEEEeeC
Confidence 999866 69999998 43 35799999999975
No 14
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=98.35 E-value=6.5e-07 Score=78.10 Aligned_cols=87 Identities=22% Similarity=0.165 Sum_probs=63.3
Q ss_pred eeeecccHHHHHHHHHHHCCCC-eEEeeeecccc-----------ccCCC-----------CCCceeEEEeCCCCHHHHH
Q psy15542 49 TDEASDGELAALISYAIAFPDG-FMALVDTYDVK-----------RYNIP-----------WFAELQIVASNDINEETIL 105 (180)
Q Consensus 49 ~~~~~~~E~~Af~aya~~fP~~-~i~LvDTYd~~-----------~Ld~~-----------g~~~vkIv~Sn~Lde~~i~ 105 (180)
|+...++..+|++++.+.+|+. ..+.+||++-. +||-- -.++++|.+|||+|+++|.
T Consensus 189 Hi~~~G~i~~Av~~~r~~~p~~~ieVEvdtlde~~eAl~aGaD~I~LDn~~~~~l~~av~~i~~~v~ieaSGGI~~~~i~ 268 (298)
T 3gnn_A 189 HIAAAGGVGEALDAAFALNAEVPVQIEVETLDQLRTALAHGARSVLLDNFTLDMMRDAVRVTEGRAVLEVSGGVNFDTVR 268 (298)
T ss_dssp ------CHHHHHHHHHHHC--CCCEEEESSHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHTTSEEEEEESSCSTTTHH
T ss_pred HHHHcCCHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhCCCCeEEEEcCCCHHHHH
Confidence 5566788899999999999964 57889999754 11110 0357999999999999999
Q ss_pred HHHHcCCceeEeeeccccccCCCCCcceeEEEEeE
Q psy15542 106 SLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVE 140 (180)
Q Consensus 106 ~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKLVe 140 (180)
++.+.| +|.|+||+ ++ ...|++++.+|++|
T Consensus 269 ~~a~tG--VD~isvG~-lt--~sa~~lD~sl~i~e 298 (298)
T 3gnn_A 269 AIAETG--VDRISIGA-LT--KDVRATDYSMRIVE 298 (298)
T ss_dssp HHHHTT--CSEEECGG-GG--TSCCCCCEEEEEC-
T ss_pred HHHHcC--CCEEEECC-ee--cCCCccceEEEEeC
Confidence 999866 59999999 43 45899999999986
No 15
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=98.27 E-value=2.5e-07 Score=78.93 Aligned_cols=84 Identities=13% Similarity=0.179 Sum_probs=68.2
Q ss_pred eeeecccHHHHHHHHHHHCCC--CeEEeeeecccc--------------------------ccCCCCCCceeEEEeCCCC
Q psy15542 49 TDEASDGELAALISYAIAFPD--GFMALVDTYDVK--------------------------RYNIPWFAELQIVASNDIN 100 (180)
Q Consensus 49 ~~~~~~~E~~Af~aya~~fP~--~~i~LvDTYd~~--------------------------~Ld~~g~~~vkIv~Sn~Ld 100 (180)
+++.++++.+|++++.+.+|. ...+.+||++.. .++ .++++++|++|||+|
T Consensus 161 Hi~~~g~~~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~~~~~l~~~v~~l~-~~~~~~~i~AsGGI~ 239 (273)
T 2b7n_A 161 HLRHVKDLKSFLTHARKNLPFTAKIEIECESFEEAKNAMNAGADIVMCDNLSVLETKEIAAYRD-AHYPFVLLEASGNIS 239 (273)
T ss_dssp HHTTCSSHHHHHHHHGGGSCTTCCEEEEESSHHHHHHHHHHTCSEEEEETCCHHHHHHHHHHHH-HHCTTCEEEEESSCC
T ss_pred HHHHhCCHHHHHHHHHHhCCCCceEEEEcCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhh-ccCCCcEEEEECCCC
Confidence 456667888999999999986 467888988654 222 246679999999999
Q ss_pred HHHHHHHHHcCCceeEeeeccccccCCCCCcceeEEEE
Q psy15542 101 EETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKL 138 (180)
Q Consensus 101 e~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKL 138 (180)
++.+.++.+.| +|.+|+|+.+. .+|++++.+|+
T Consensus 240 ~~ni~~~~~aG--aD~i~vGs~i~---~a~~~D~s~~i 272 (273)
T 2b7n_A 240 LESINAYAKSG--VDAISVGALIH---QATFIDMHMKM 272 (273)
T ss_dssp TTTHHHHHTTT--CSEEECTHHHH---TCCCCCEEEEC
T ss_pred HHHHHHHHHcC--CcEEEEcHHhc---CCCCCceEEEe
Confidence 99999999977 49999999865 57999999886
No 16
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.89 E-value=1.3e-05 Score=69.43 Aligned_cols=76 Identities=22% Similarity=0.298 Sum_probs=60.2
Q ss_pred ccHHHHHHHHHHHCCC-CeEEeeeecccc--------------------------ccCCCCCCceeEEEeCCCCHHHHHH
Q psy15542 54 DGELAALISYAIAFPD-GFMALVDTYDVK--------------------------RYNIPWFAELQIVASNDINEETILS 106 (180)
Q Consensus 54 ~~E~~Af~aya~~fP~-~~i~LvDTYd~~--------------------------~Ld~~g~~~vkIv~Sn~Lde~~i~~ 106 (180)
++=.+|++++.+.+|+ ..++.+||++.. .++ ++++|.+|||||++.|.+
T Consensus 193 Gti~~ai~~~r~~~~~~kI~vev~tlee~~eA~~aGaD~I~ld~~~~e~l~~~v~~~~----~~~~I~ASGGIt~~~i~~ 268 (296)
T 1qap_A 193 GSVRQAVEKAFWLHPDVPVEVEVENLDELDDALKAGADIIMLDNFNTDQMREAVKRVN----GQARLEVSGNVTAETLRE 268 (296)
T ss_dssp SSHHHHHHHHHHHSTTSCEEEEESSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHTTC----TTCCEEECCCSCHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhC----CCCeEEEECCCCHHHHHH
Confidence 3346788888888886 577888888654 222 368999999999999999
Q ss_pred HHHcCCceeEeeeccccccCCCCCcceeEEEE
Q psy15542 107 LNEQGHRIDCFGIGTHLVTCQRQPALGCVYKL 138 (180)
Q Consensus 107 L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKL 138 (180)
+.+.|+ |.||||+ ++ ..+|++++.+|+
T Consensus 269 ~a~~Gv--D~isvGs-li--~~a~~~D~sl~i 295 (296)
T 1qap_A 269 FAETGV--DFISVGA-LT--KHVRALDLSMRF 295 (296)
T ss_dssp HHHTTC--SEEECSH-HH--HEEECCCEEEEC
T ss_pred HHHcCC--CEEEEeH-HH--cCCCCCceEEEe
Confidence 999884 9999999 44 347899999885
No 17
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=96.45 E-value=0.0035 Score=54.28 Aligned_cols=45 Identities=16% Similarity=0.407 Sum_probs=37.9
Q ss_pred CceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCCCCCcceeEEEE
Q psy15542 89 AELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKL 138 (180)
Q Consensus 89 ~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKL 138 (180)
.+++|.+|||+|++.|.++.+.| +|.++||.-. + ..|++++.+|+
T Consensus 241 ~~v~ieaSGGIt~~~i~~~a~tG--VD~IsvGalt-~--sa~~lD~sl~i 285 (287)
T 3tqv_A 241 GKVALEVSGNIDRNSIVAIAKTG--VDFISVGAIT-K--HIKAIDLSLQV 285 (287)
T ss_dssp TTCEEEEESSCCTTTHHHHHTTT--CSEEECSHHH-H--SBCCCCEEEEE
T ss_pred CCceEEEECCCCHHHHHHHHHcC--CCEEEEChhh-c--CCcccceEEEe
Confidence 47899999999999999999865 7999998644 3 36899999886
No 18
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=96.43 E-value=0.003 Score=54.36 Aligned_cols=45 Identities=16% Similarity=0.278 Sum_probs=38.0
Q ss_pred CceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCCCCCcceeEEEE
Q psy15542 89 AELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKL 138 (180)
Q Consensus 89 ~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKL 138 (180)
.+++|.+|||+|+++|.++.+.| +|.+++|.-. + ..|++++.+|+
T Consensus 240 ~~v~ieaSGGIt~~~i~~~a~tG--VD~isvG~l~-~--~a~~~D~sl~i 284 (284)
T 1qpo_A 240 PTVMLESSGGLSLQTAATYAETG--VDYLAVGALT-H--SVRVLDIGLDM 284 (284)
T ss_dssp TTCEEEEESSCCTTTHHHHHHTT--CSEEECGGGT-S--SBCCCCEEEEC
T ss_pred CCeEEEEECCCCHHHHHHHHhcC--CCEEEECHHH-c--CCCCcceEEeC
Confidence 56899999999999999999976 7999999943 3 36889988774
No 19
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=95.46 E-value=0.019 Score=50.01 Aligned_cols=45 Identities=13% Similarity=0.205 Sum_probs=38.3
Q ss_pred CceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCCCCCcceeEEEE
Q psy15542 89 AELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKL 138 (180)
Q Consensus 89 ~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKL 138 (180)
.+++|.+|||+|++.|.++.+.| +|.+++|. |+. ..|++++.+|+
T Consensus 250 ~~v~leaSGGIt~~~i~~~A~tG--VD~IsvGa-lth--sa~~lDisl~i 294 (300)
T 3l0g_A 250 GKSVLEVSGCVNIRNVRNIALTG--VDYISIGC-ITN--SFQNKDIGLDI 294 (300)
T ss_dssp TSSEEEEESSCCTTTHHHHHTTT--CSEEECGG-GTS--SCCCCCEEEEE
T ss_pred CceEEEEECCCCHHHHHHHHHcC--CCEEEeCc-ccc--CCCcceeEEEe
Confidence 37889999999999999999865 79999994 443 47899999998
No 20
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=94.39 E-value=0.044 Score=47.07 Aligned_cols=46 Identities=22% Similarity=0.302 Sum_probs=39.3
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCCCCCcceeEEEEeE
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVE 140 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKLVe 140 (180)
+++|++|||+|++.+.++.+.| +|.++||.-. + ..|++++.+|+++
T Consensus 240 ~ipi~AsGGIt~eni~~~a~tG--vD~IsVgs~~-~--~a~~~D~sl~i~~ 285 (286)
T 1x1o_A 240 RVPLEASGNMTLERAKAAAEAG--VDYVSVGALT-H--SAKALDLSLLVVR 285 (286)
T ss_dssp SSCEEEESSCCHHHHHHHHHHT--CSEEECTHHH-H--SCCCCCEEEEEEE
T ss_pred CCeEEEEcCCCHHHHHHHHHcC--CCEEEEcHHH-c--CCCceeeEEEEec
Confidence 5789999999999999999977 7999998744 3 4789999999864
No 21
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=93.95 E-value=0.019 Score=49.47 Aligned_cols=46 Identities=11% Similarity=0.164 Sum_probs=39.2
Q ss_pred CceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCCCCCcceeEEEEe
Q psy15542 89 AELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLV 139 (180)
Q Consensus 89 ~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~VyKLV 139 (180)
.+++|.+|||+|++.|.++.+.| +|.++||.-.. ..|++++.+|++
T Consensus 239 ~~v~ieASGGIt~eni~~~a~tG--VD~IsvGslt~---sa~~~D~sl~i~ 284 (285)
T 1o4u_A 239 PNVIVEVSGGITEENVSLYDFET--VDVISSSRLTL---QEVFVDLSLEIQ 284 (285)
T ss_dssp TTSEEEEEECCCTTTGGGGCCTT--CCEEEEGGGTS---SCCCCCEEEEEC
T ss_pred CCceEEEECCCCHHHHHHHHHcC--CCEEEEeHHHc---CCCCcceEEEEe
Confidence 46899999999999999998865 79999998443 478999999875
No 22
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=83.96 E-value=0.62 Score=36.55 Aligned_cols=35 Identities=17% Similarity=0.386 Sum_probs=31.2
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
+++|+++||++.+.+.++.+.| ++++.||+.|...
T Consensus 148 ~ipvia~GGI~~~~i~~~~~~G--a~gv~vGsai~~~ 182 (212)
T 2v82_A 148 DIAVFAVGGVTPENLAQWIDAG--CAGAGLGSDLYRA 182 (212)
T ss_dssp TCEEEEESSCCTTTHHHHHHHT--CSEEEECTTTCCT
T ss_pred CCeEEEeCCCCHHHHHHHHHcC--CCEEEEChHHhCC
Confidence 5889999999999999999866 6899999999754
No 23
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=83.42 E-value=1.9 Score=37.63 Aligned_cols=40 Identities=23% Similarity=0.286 Sum_probs=34.6
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCCCCCc
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQRQPA 131 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~ 131 (180)
+++|+++||+ +.+.+.+....| .|+.++||.|..+...|.
T Consensus 207 ~iPVIA~GGI~~~~di~kala~G--Ad~V~vGs~~~~t~Esp~ 247 (361)
T 3khj_A 207 GIPIIADGGIRYSGDIGKALAVG--ASSVMIGSILAGTEESPG 247 (361)
T ss_dssp TCCEEEESCCCSHHHHHHHHHHT--CSEEEESTTTTTBTTSSC
T ss_pred CCeEEEECCCCCHHHHHHHHHcC--CCEEEEChhhhcCCcCCc
Confidence 4689999999 799998888877 689999999998887775
No 24
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=82.13 E-value=1.1 Score=35.24 Aligned_cols=34 Identities=12% Similarity=0.425 Sum_probs=30.4
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeecccccc
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
+++|+++||+ +.+.+.++.+.| +|++.||+.|..
T Consensus 175 ~ipvia~GGI~~~~~~~~~~~~G--ad~v~vG~al~~ 209 (223)
T 1y0e_A 175 DAKVIAEGNVITPDMYKRVMDLG--VHCSVVGGAITR 209 (223)
T ss_dssp CSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHC
T ss_pred CCCEEEecCCCCHHHHHHHHHcC--CCEEEEChHHcC
Confidence 4789999999 999999999976 799999999864
No 25
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=81.96 E-value=0.55 Score=36.55 Aligned_cols=36 Identities=22% Similarity=0.513 Sum_probs=31.8
Q ss_pred CCceeEEEeCCCCHHHHHHHHHcCCceeEeeecccccc
Q psy15542 88 FAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 88 ~~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
+++++|+++||++.+.+.++.+.| .|+++|||.+..
T Consensus 148 ~~~~pvia~GGI~~~~~~~~~~~G--a~~v~vGs~i~~ 183 (205)
T 1wa3_A 148 FPNVKFVPTGGVNLDNVCEWFKAG--VLAVGVGSALVK 183 (205)
T ss_dssp CTTCEEEEBSSCCTTTHHHHHHHT--CSCEEECHHHHC
T ss_pred CCCCcEEEcCCCCHHHHHHHHHCC--CCEEEECccccC
Confidence 447899999999999999999877 689999999975
No 26
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=79.28 E-value=1.4 Score=35.08 Aligned_cols=34 Identities=18% Similarity=0.394 Sum_probs=30.2
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeecccccc
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
+++|+++||++ .+.+.++.+.| +|++.||+.|..
T Consensus 186 ~ipvia~GGI~s~~~~~~~~~~G--ad~v~vGsal~~ 220 (234)
T 1yxy_A 186 GIAVIAEGKIHSPEEAKKINDLG--VAGIVVGGAITR 220 (234)
T ss_dssp TCCEEEESCCCSHHHHHHHHTTC--CSEEEECHHHHC
T ss_pred CCCEEEECCCCCHHHHHHHHHCC--CCEEEEchHHhC
Confidence 57899999999 99999999876 799999998864
No 27
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=76.97 E-value=1.3 Score=34.47 Aligned_cols=37 Identities=16% Similarity=0.275 Sum_probs=31.8
Q ss_pred CceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 89 AELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 89 ~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++++|++++|++.+.+.++.+.| +|.+.||+.++...
T Consensus 158 ~~~~i~~~gGI~~~~~~~~~~~G--ad~vvvGsai~~~~ 194 (211)
T 3f4w_A 158 RKARIAVAGGISSQTVKDYALLG--PDVVIVGSAITHAA 194 (211)
T ss_dssp SSCEEEEESSCCTTTHHHHHTTC--CSEEEECHHHHTCS
T ss_pred CCCcEEEECCCCHHHHHHHHHcC--CCEEEECHHHcCCC
Confidence 46789999999999999999866 68999999998643
No 28
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=74.14 E-value=4.3 Score=34.33 Aligned_cols=70 Identities=27% Similarity=0.397 Sum_probs=48.9
Q ss_pred ccHHHHHHHHHHHCCCCeEEeeeecccc---------------------ccCCC---------CC-CceeEEEeCCC-CH
Q psy15542 54 DGELAALISYAIAFPDGFMALVDTYDVK---------------------RYNIP---------WF-AELQIVASNDI-NE 101 (180)
Q Consensus 54 ~~E~~Af~aya~~fP~~~i~LvDTYd~~---------------------~Ld~~---------g~-~~vkIv~Sn~L-de 101 (180)
+.++..|..++... +..+|+++.+.. .+..+ .. .++.+|+.+|+ +.
T Consensus 155 ~~~l~~l~~~a~~l--Gl~~lvevh~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~~vIaesGI~t~ 232 (272)
T 3tsm_A 155 DDLAKELEDTAFAL--GMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIFTH 232 (272)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEECSHHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCTTSEEEEESSCCSH
T ss_pred HHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCCCCcEEEECCCCCH
Confidence 34577777777776 356777776555 01100 01 14568888898 99
Q ss_pred HHHHHHHHcCCceeEeeeccccccCC
Q psy15542 102 ETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 102 ~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
+.+..+.+.| +|+|-||+.|+...
T Consensus 233 edv~~l~~~G--a~gvLVG~almr~~ 256 (272)
T 3tsm_A 233 EDCLRLEKSG--IGTFLIGESLMRQH 256 (272)
T ss_dssp HHHHHHHTTT--CCEEEECHHHHTSS
T ss_pred HHHHHHHHcC--CCEEEEcHHHcCCc
Confidence 9999999866 69999999998654
No 29
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=74.07 E-value=1.7 Score=34.34 Aligned_cols=35 Identities=9% Similarity=0.330 Sum_probs=30.9
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
+++|++.||+|.+.+.++.+.| .|++.||+.+...
T Consensus 164 ~~pvia~GGI~~~nv~~~~~~G--a~gv~vgs~i~~~ 198 (221)
T 1yad_A 164 SIPVIAIGGMTPDRLRDVKQAG--ADGIAVMSGIFSS 198 (221)
T ss_dssp CSCEEEESSCCGGGHHHHHHTT--CSEEEESHHHHTS
T ss_pred CCCEEEECCCCHHHHHHHHHcC--CCEEEEhHHhhCC
Confidence 5679999999999999999865 7899999999764
No 30
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=73.74 E-value=3.1 Score=34.98 Aligned_cols=36 Identities=22% Similarity=0.355 Sum_probs=31.5
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.+|+.+|++ .+.+..+.+.| +|++.||+.|+...
T Consensus 213 ~~pvVaegGI~t~edv~~l~~~G--adgvlVGsal~~a~ 249 (272)
T 3qja_A 213 SVIRIAESGVRGTADLLAYAGAG--ADAVLVGEGLVTSG 249 (272)
T ss_dssp TSEEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHTCS
T ss_pred cCEEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHhCCC
Confidence 56799999998 99999999876 69999999998654
No 31
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=73.13 E-value=5 Score=35.20 Aligned_cols=40 Identities=18% Similarity=0.370 Sum_probs=34.3
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCCCCCc
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQRQPA 131 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~ 131 (180)
+++|+++||+ +...+.+....| .|+.++||.|..+...|.
T Consensus 211 ~iPVIA~GGI~~~~di~kala~G--Ad~V~vGs~f~~t~Esp~ 251 (366)
T 4fo4_A 211 GIPVIADGGIRFSGDISKAIAAG--ASCVMVGSMFAGTEEAPG 251 (366)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSSS
T ss_pred CCeEEEeCCCCCHHHHHHHHHcC--CCEEEEChHhhcCCCCCc
Confidence 5789999999 888888888877 589999999998877665
No 32
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=72.36 E-value=1.9 Score=34.47 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=31.6
Q ss_pred CCceeEEEeCCCCHHHHHHHHHcCCceeEeeecccccc
Q psy15542 88 FAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 88 ~~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
++++++++.||++.+.+.++.+.| .++.++|+.|+.
T Consensus 149 ~~~ipvvaiGGI~~~n~~~~l~aG--a~~vavgSai~~ 184 (207)
T 2yw3_A 149 FPEVRFLPTGGIKEEHLPHYAALP--NLLAVGGSWLLQ 184 (207)
T ss_dssp CTTCEEEEBSSCCGGGHHHHHTCS--SBSCEEESGGGS
T ss_pred CCCCcEEEeCCCCHHHHHHHHhCC--CcEEEEehhhhC
Confidence 457899999999999999999866 588999999875
No 33
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=71.79 E-value=5 Score=35.78 Aligned_cols=41 Identities=22% Similarity=0.256 Sum_probs=34.8
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCCCCCcc
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQRQPAL 132 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~L 132 (180)
++.||++||+ +.+.|......| .|+..|||.|..+...|.=
T Consensus 246 ~IPVIA~GGI~~~~di~kalalG--Ad~V~vGt~f~~t~Es~~~ 287 (400)
T 3ffs_A 246 GIPIIADGGIRYSGDIGKALAVG--ASSVMIGSILAGTEESPGE 287 (400)
T ss_dssp TCCEEEESCCCSHHHHHHHHTTT--CSEEEECGGGTTBTTSSCC
T ss_pred CCCEEecCCCCCHHHHHHHHHcC--CCEEEEChHHhcCCCCCch
Confidence 5789999999 688888888876 5899999999988877653
No 34
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=68.75 E-value=2.7 Score=33.53 Aligned_cols=35 Identities=20% Similarity=0.370 Sum_probs=30.5
Q ss_pred ceeEEEeCCCCH-HHHHHHHHcCCceeEeeeccccccC
Q psy15542 90 ELQIVASNDINE-ETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Lde-~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
+++|++++|++. +.+.++.+.| +|++.|||.+...
T Consensus 191 ~~pi~~~GGI~~~e~i~~~~~~G--ad~vivGsai~~~ 226 (248)
T 1geq_A 191 RNKVAVGFGVSKREHVVSLLKEG--ANGVVVGSALVKI 226 (248)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHHH
T ss_pred CCCEEEEeecCCHHHHHHHHHcC--CCEEEEcHHHHhh
Confidence 578999999998 9999998866 6999999999753
No 35
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=68.15 E-value=2.2 Score=32.88 Aligned_cols=35 Identities=17% Similarity=0.352 Sum_probs=30.2
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
+++|+++||++.+.+.++.+.| +|++.||+.+...
T Consensus 162 ~~pvia~GGI~~~nv~~~~~~G--a~gv~vgs~i~~~ 196 (215)
T 1xi3_A 162 KIPVVAIGGINKDNAREVLKTG--VDGIAVISAVMGA 196 (215)
T ss_dssp SSCEEEESSCCTTTHHHHHTTT--CSEEEESHHHHTS
T ss_pred CCCEEEECCcCHHHHHHHHHcC--CCEEEEhHHHhCC
Confidence 5679999999999999998754 7899999999764
No 36
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=66.48 E-value=5 Score=34.40 Aligned_cols=38 Identities=21% Similarity=0.398 Sum_probs=32.9
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCCCC
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQRQ 129 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~~~ 129 (180)
+++|++.||| |.+.+.++.+.| .|++.+||.+..+...
T Consensus 208 ~iPViaaGGI~~~~~~~~~l~~G--Ad~V~vGs~~~~~~e~ 246 (369)
T 3bw2_A 208 DIPVVAAGGIMRGGQIAAVLAAG--ADAAQLGTAFLATDES 246 (369)
T ss_dssp SSCEEEESSCCSHHHHHHHHHTT--CSEEEESHHHHTSTTC
T ss_pred CceEEEECCCCCHHHHHHHHHcC--CCEEEEChHHhCCccc
Confidence 5689999999 999999999876 6999999999876543
No 37
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=63.89 E-value=4.9 Score=32.72 Aligned_cols=34 Identities=9% Similarity=0.125 Sum_probs=30.0
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeecccccc
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
++.+|+++|+ +.+.+.++.+.| .|++.||+.|+.
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~G--adgV~VGsal~~ 215 (232)
T 3igs_A 181 GCRVIAEGRYNSPALAAEAIRYG--AWAVTVGSAITR 215 (232)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHC
T ss_pred CCcEEEECCCCCHHHHHHHHHcC--CCEEEEehHhcC
Confidence 6789999999 599999999876 689999999974
No 38
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=63.61 E-value=37 Score=25.55 Aligned_cols=36 Identities=22% Similarity=0.331 Sum_probs=26.7
Q ss_pred CCCceeEEEeCCCC-----HHHHHHHHHcCCceeEeeeccc
Q psy15542 87 WFAELQIVASNDIN-----EETILSLNEQGHRIDCFGIGTH 122 (180)
Q Consensus 87 g~~~vkIv~Sn~Ld-----e~~i~~L~~~g~~id~fGIGT~ 122 (180)
...++-|++|||.+ .+.+..+.+.|..+.++|||+.
T Consensus 110 ~~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~ 150 (218)
T 3ibs_A 110 GVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMP 150 (218)
T ss_dssp SCCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCT
T ss_pred CCCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCC
Confidence 45566699999986 3445666677878889999984
No 39
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=63.48 E-value=3.6 Score=32.58 Aligned_cols=36 Identities=11% Similarity=0.190 Sum_probs=30.9
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
+++|++.+|++++.+.++.+.| .|++.||+.++...
T Consensus 179 ~~pi~v~GGI~~~n~~~~~~aG--ad~vvvgSaI~~a~ 214 (230)
T 1rpx_A 179 NPWIEVDGGVGPKNAYKVIEAG--ANALVAGSAVFGAP 214 (230)
T ss_dssp CCEEEEESSCCTTTHHHHHHHT--CCEEEESHHHHTSS
T ss_pred CceEEEECCCCHHHHHHHHHcC--CCEEEEChhhhCCC
Confidence 4679999999999999988866 58999999998643
No 40
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=62.64 E-value=5.1 Score=32.87 Aligned_cols=35 Identities=17% Similarity=0.386 Sum_probs=30.7
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccC
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
+++|+++||+ +.+.+.++.+.| .|..+|||.+..+
T Consensus 241 ~ipvia~GGI~~~~d~~~~l~~G--Ad~V~vg~~~l~~ 276 (311)
T 1ep3_A 241 DIPIIGMGGVANAQDVLEMYMAG--ASAVAVGTANFAD 276 (311)
T ss_dssp SSCEEECSSCCSHHHHHHHHHHT--CSEEEECTHHHHC
T ss_pred CCCEEEECCcCCHHHHHHHHHcC--CCEEEECHHHHcC
Confidence 6789999999 799999988877 7999999999764
No 41
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=62.17 E-value=2.9 Score=32.66 Aligned_cols=35 Identities=14% Similarity=0.224 Sum_probs=30.2
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
+++|+++||++.+.+.++.+.| .|++.||+.+...
T Consensus 172 ~~pvia~GGI~~~nv~~~~~~G--a~gv~vgs~i~~~ 206 (227)
T 2tps_A 172 SIPIVGIGGITIDNAAPVIQAG--ADGVSMISAISQA 206 (227)
T ss_dssp CCCEEEESSCCTTTSHHHHHTT--CSEEEESHHHHTS
T ss_pred CCCEEEEcCCCHHHHHHHHHcC--CCEEEEhHHhhcC
Confidence 3789999999999999998755 6899999999754
No 42
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=62.13 E-value=5.4 Score=32.45 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=30.1
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeecccccc
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
++.+|+++|+ +.+.+.++.+.| .|++.||+.|+.
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~G--adgV~VGsai~~ 215 (229)
T 3q58_A 181 GCRVIAEGRYNTPALAANAIEHG--AWAVTVGSAITR 215 (229)
T ss_dssp TCCEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHC
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEEchHhcC
Confidence 6789999999 599999999876 689999999974
No 43
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=62.04 E-value=3.7 Score=32.75 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=31.3
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
+++|++.||||++.+.++.+.| +|.+=+|+.+....
T Consensus 173 ~~pi~v~GGI~~~ni~~~~~aG--aD~vvvGsai~~~~ 208 (228)
T 1h1y_A 173 SLDIEVDGGLGPSTIDVAASAG--ANCIVAGSSIFGAA 208 (228)
T ss_dssp TSEEEEESSCSTTTHHHHHHHT--CCEEEESHHHHTSS
T ss_pred CCCEEEECCcCHHHHHHHHHcC--CCEEEECHHHHCCC
Confidence 6679999999999999998866 69999999998643
No 44
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=61.81 E-value=12 Score=33.71 Aligned_cols=40 Identities=15% Similarity=0.314 Sum_probs=34.3
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCCCCCc
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQRQPA 131 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~ 131 (180)
++.|+++||+ +.+.|.+....| .|+..|||.|..+...|.
T Consensus 332 ~iPVIa~GGI~~~~di~kal~~G--Ad~V~vGs~~~~~~Esp~ 372 (490)
T 4avf_A 332 GVPLIADGGIRFSGDLAKAMVAG--AYCVMMGSMFAGTEEAPG 372 (490)
T ss_dssp TCCEEEESCCCSHHHHHHHHHHT--CSEEEECTTTTTBTTSSS
T ss_pred CCcEEEeCCCCCHHHHHHHHHcC--CCeeeecHHHhcCCCCCC
Confidence 5789999999 899998888877 489999999998776665
No 45
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=61.62 E-value=4.8 Score=32.78 Aligned_cols=36 Identities=14% Similarity=0.399 Sum_probs=31.2
Q ss_pred CCCceeEEEeCCCCHHHHHHHHH-cCCceeEeeecccccc
Q psy15542 87 WFAELQIVASNDINEETILSLNE-QGHRIDCFGIGTHLVT 125 (180)
Q Consensus 87 g~~~vkIv~Sn~Lde~~i~~L~~-~g~~id~fGIGT~Lvt 125 (180)
.++++++++.||+|++.+.++.+ .| ++++| |+.|+.
T Consensus 163 ~~~~ipvvaiGGI~~~N~~~~l~~~G--a~~v~-gSai~~ 199 (225)
T 1mxs_A 163 PFGDIRFCPTGGVNPANVRNYMALPN--VMCVG-TTWMLD 199 (225)
T ss_dssp TTTTCEEEEBSSCCTTTHHHHHHSTT--BCCEE-ECTTSC
T ss_pred hCCCCeEEEECCCCHHHHHHHHhccC--CEEEE-EchhcC
Confidence 56689999999999999999998 34 68899 999975
No 46
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=61.26 E-value=4.6 Score=31.15 Aligned_cols=36 Identities=11% Similarity=0.207 Sum_probs=30.8
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.|++.+|++.+.+.++.+.| .|.+.||+.++...
T Consensus 158 ~~pi~v~GGI~~~~~~~~~~aG--ad~vvvGsaI~~~~ 193 (207)
T 3ajx_A 158 RVPFSVAGGVKVATIPAVQKAG--AEVAVAGGAIYGAA 193 (207)
T ss_dssp TSCEEEESSCCGGGHHHHHHTT--CSEEEESHHHHTSS
T ss_pred CCCEEEECCcCHHHHHHHHHcC--CCEEEEeeeccCCC
Confidence 5679999999999999998876 58999999997643
No 47
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=60.12 E-value=7.6 Score=31.72 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=31.1
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
+++|.+.||+|++++..+.+.| +|.|=+|+.+...
T Consensus 173 ~~~I~VdGGI~~~ti~~~~~aG--Ad~~V~GsaIf~~ 207 (227)
T 1tqx_A 173 NLNIQVDGGLNIETTEISASHG--ANIIVAGTSIFNA 207 (227)
T ss_dssp TCEEEEESSCCHHHHHHHHHHT--CCEEEESHHHHTC
T ss_pred CCeEEEECCCCHHHHHHHHHcC--CCEEEEeHHHhCC
Confidence 6789999999999999999977 5889999998764
No 48
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=58.52 E-value=5 Score=31.20 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=30.3
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
+.+|+++||++.+.+.++.+.| .|++-||+.+...
T Consensus 170 ~~~i~v~GGI~~~~~~~~~~~G--ad~vvvGsai~~~ 204 (220)
T 2fli_A 170 SFDIEVDGGVDNKTIRACYEAG--ANVFVAGSYLFKA 204 (220)
T ss_dssp CCEEEEESSCCTTTHHHHHHHT--CCEEEESHHHHTS
T ss_pred CceEEEECcCCHHHHHHHHHcC--CCEEEEChHHhCC
Confidence 4669999999999999998866 5889999999865
No 49
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=57.98 E-value=9.4 Score=31.49 Aligned_cols=31 Identities=16% Similarity=0.249 Sum_probs=27.4
Q ss_pred EEeCCC-CHHHHHHHHHcCCceeEeeeccccccC
Q psy15542 94 VASNDI-NEETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 94 v~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
+++||+ +.+.+..+.+.| +|++.||+.+...
T Consensus 213 ~a~GGI~~~e~i~~~~~aG--adgvvvGsai~~~ 244 (297)
T 2zbt_A 213 FAAGGIATPADAALMMHLG--MDGVFVGSGIFKS 244 (297)
T ss_dssp EBCSSCCSHHHHHHHHHTT--CSEEEECGGGGGS
T ss_pred EeeCCCCCHHHHHHHHHcC--CCEEEEchHHhCC
Confidence 499999 999999999876 6999999999853
No 50
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=57.48 E-value=4.3 Score=33.50 Aligned_cols=37 Identities=11% Similarity=0.157 Sum_probs=31.6
Q ss_pred CceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 89 AELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 89 ~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
.++++++-||++.+.+.++.+.| +|++.||+.|....
T Consensus 190 ~~iPvvAiGGI~~~ni~~~~~aG--a~gvav~sai~~a~ 226 (243)
T 3o63_A 190 DDKPWFAIGGINAQRLPAVLDAG--ARRIVVVRAITSAD 226 (243)
T ss_dssp -CCCEEEESSCCTTTHHHHHHTT--CCCEEESHHHHTCS
T ss_pred CCCCEEEecCCCHHHHHHHHHcC--CCEEEEeHHHhCCC
Confidence 36789999999999999999966 68999999997643
No 51
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=57.20 E-value=5.6 Score=32.86 Aligned_cols=35 Identities=26% Similarity=0.287 Sum_probs=30.4
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.+|+++|++ .+.+..+.+ | +|++-||+.|+...
T Consensus 208 ~~~vIAegGI~s~~dv~~l~~-G--a~gvlVGsAl~~~~ 243 (254)
T 1vc4_A 208 GGVLVAESGYSRKEELKALEG-L--FDAVLIGTSLMRAP 243 (254)
T ss_dssp CSEEEEESCCCSHHHHHTTTT-T--CSEEEECHHHHTSS
T ss_pred CCeEEEEcCCCCHHHHHHHHc-C--CCEEEEeHHHcCCC
Confidence 45699999998 999999998 6 69999999998654
No 52
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=57.09 E-value=6.4 Score=31.70 Aligned_cols=37 Identities=19% Similarity=0.371 Sum_probs=31.2
Q ss_pred CCCceeEEEeCCCCHHHHHHHHHcCCceeEeeecccccc
Q psy15542 87 WFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 87 g~~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
.++++++++.||+|++.+.++.+.| .+++.| |+.|+.
T Consensus 153 ~~~~ipvvaiGGI~~~n~~~~l~ag-g~~~v~-gS~i~~ 189 (214)
T 1wbh_A 153 PFSQVRFCPTGGISPANYRDYLALK-SVLCIG-GSWLVP 189 (214)
T ss_dssp TCTTCEEEEBSSCCTTTHHHHHTST-TBSCEE-EGGGSC
T ss_pred hCCCCeEEEECCCCHHHHHHHHhcC-CCeEEE-eccccC
Confidence 4668999999999999999999864 278888 888874
No 53
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=57.07 E-value=5.1 Score=31.59 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=31.1
Q ss_pred CceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccC
Q psy15542 89 AELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 89 ~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
.++++++.||++.+.+.++.+.| .++++||+.+...
T Consensus 143 ~~iPviaiGGI~~~nv~~~~~~G--a~gVav~s~i~~~ 178 (210)
T 3ceu_A 143 IDSKVMALGGINEDNLLEIKDFG--FGGAVVLGDLWNK 178 (210)
T ss_dssp SSTTEEEESSCCTTTHHHHHHTT--CSEEEESHHHHTT
T ss_pred CCCCEEEECCCCHHHHHHHHHhC--CCEEEEhHHhHcC
Confidence 36789999999999999999855 6899999999753
No 54
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=56.33 E-value=9.4 Score=33.89 Aligned_cols=40 Identities=18% Similarity=0.360 Sum_probs=34.5
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCCCCCc
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQRQPA 131 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~ 131 (180)
+++|+++||+ +...+.+....| .|+.++|+.+..|...|.
T Consensus 340 ~ipvia~GGI~~~~di~kala~G--Ad~V~iGr~~l~~~e~~~ 380 (494)
T 1vrd_A 340 DVPIIADGGIRYSGDIVKALAAG--AESVMVGSIFAGTEEAPG 380 (494)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTBTTSSS
T ss_pred CCCEEEECCcCCHHHHHHHHHcC--CCEEEECHHHhcCCcCCc
Confidence 6789999999 888888888877 699999999998776665
No 55
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=56.04 E-value=9.6 Score=29.58 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=29.7
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccC
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
+++|++++|++ .+.+.++.+.| +|++.||+.|...
T Consensus 198 ~~pvia~GGi~~~~~~~~~~~~G--a~~v~vgsal~~~ 233 (253)
T 1h5y_A 198 RIPVIASGGAGRVEHFYEAAAAG--ADAVLAASLFHFR 233 (253)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTT
T ss_pred CCCEEEeCCCCCHHHHHHHHHcC--CcHHHHHHHHHcC
Confidence 57899999998 58999988755 7999999999754
No 56
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=54.99 E-value=7.1 Score=31.75 Aligned_cols=37 Identities=27% Similarity=0.338 Sum_probs=31.2
Q ss_pred CCCceeEEEeCCCCHHHHHHHHHcCCceeEeeecccccc
Q psy15542 87 WFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 87 g~~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
.++++++++.||+|++.+.++.+.| .+++.| |+.|+.
T Consensus 154 ~~~~ipvvaiGGI~~~N~~~~l~ag-ga~~v~-gS~i~~ 190 (224)
T 1vhc_A 154 PYAQLQIMPTGGIGLHNIRDYLAIP-NIVACG-GSWFVE 190 (224)
T ss_dssp TTTTCEEEEBSSCCTTTHHHHHTST-TBCCEE-ECGGGC
T ss_pred hCCCCeEEEECCcCHHHHHHHHhcC-CCEEEE-EchhcC
Confidence 4568899999999999999999864 378888 888875
No 57
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=54.84 E-value=15 Score=27.43 Aligned_cols=38 Identities=13% Similarity=0.243 Sum_probs=26.5
Q ss_pred CCCCceeEEEeCCCCHHH------HHHHHHcCCceeEeeecccc
Q psy15542 86 PWFAELQIVASNDINEET------ILSLNEQGHRIDCFGIGTHL 123 (180)
Q Consensus 86 ~g~~~vkIv~Sn~Lde~~------i~~L~~~g~~id~fGIGT~L 123 (180)
+...++-|++|||.+.+. +..+++.|..+-++|||...
T Consensus 120 ~~~~~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG~~~ 163 (178)
T 2xgg_A 120 EHVPKLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVGHYV 163 (178)
T ss_dssp TTSCEEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC---
T ss_pred CCCCEEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcCCcC
Confidence 345677799999986554 56667778888899999865
No 58
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=54.75 E-value=10 Score=31.84 Aligned_cols=37 Identities=19% Similarity=0.417 Sum_probs=31.2
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCCC
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQR 128 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~~ 128 (180)
+++|+++||+ +.+.+.++.+.| .|+..|||.+..+..
T Consensus 172 ~iPviaaGGI~~~~~v~~al~~G--AdgV~vGs~~~~~~e 209 (328)
T 2gjl_A 172 RVPIIASGGFADGRGLVAALALG--ADAINMGTRFLATRE 209 (328)
T ss_dssp CSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHTSSS
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEECHHHHcCcc
Confidence 5789999999 788888887766 699999999987654
No 59
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=53.91 E-value=7.7 Score=32.11 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=31.4
Q ss_pred CCCCceeEEEeCCCCHHHHHHHHHcCCceeEeeecccccc
Q psy15542 86 PWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 86 ~g~~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
.+++++++++.||++++.+.+..+.|+ .+-++|+.|+.
T Consensus 170 ~p~p~ip~~ptGGI~~~n~~~~l~aGa--~~~vgGs~l~~ 207 (232)
T 4e38_A 170 GPYGDIRLMPTGGITPSNIDNYLAIPQ--VLACGGTWMVD 207 (232)
T ss_dssp TTCTTCEEEEBSSCCTTTHHHHHTSTT--BCCEEECGGGC
T ss_pred HHhcCCCeeeEcCCCHHHHHHHHHCCC--eEEEECchhcC
Confidence 357899999999999999999998775 34666888874
No 60
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=53.81 E-value=19 Score=26.84 Aligned_cols=37 Identities=19% Similarity=0.235 Sum_probs=27.7
Q ss_pred CCCceeEEEeCCCC-------HHHHHHHHHcCCceeEeeecccc
Q psy15542 87 WFAELQIVASNDIN-------EETILSLNEQGHRIDCFGIGTHL 123 (180)
Q Consensus 87 g~~~vkIv~Sn~Ld-------e~~i~~L~~~g~~id~fGIGT~L 123 (180)
...++-|++|||.+ .+.+..+.+.|..+-++|||+..
T Consensus 109 ~~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~ 152 (198)
T 1n3y_A 109 DAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAF 152 (198)
T ss_dssp TSEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGG
T ss_pred CCceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEccccc
Confidence 34556588888763 34577778888889999999875
No 61
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=51.37 E-value=9.7 Score=31.07 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=30.5
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeec-cccccC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIG-THLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIG-T~Lvt~ 126 (180)
++.|.+-||+|++++..+.+.| +|.|-+| +.+...
T Consensus 167 ~~~I~VdGGI~~~~~~~~~~aG--Ad~~V~G~saif~~ 202 (231)
T 3ctl_A 167 EYEIEVDGSCNQATYEKLMAAG--ADVFIVGTSGLFNH 202 (231)
T ss_dssp CCEEEEESCCSTTTHHHHHHHT--CCEEEECTTTTGGG
T ss_pred CceEEEECCcCHHHHHHHHHcC--CCEEEEccHHHhCC
Confidence 4679999999999999999977 5899999 888764
No 62
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=50.11 E-value=19 Score=32.20 Aligned_cols=39 Identities=18% Similarity=0.303 Sum_probs=31.7
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccCCCCC
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTCQRQP 130 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~~~~p 130 (180)
++.|+++||+. ...+.+....| .|+.++|+.|..+...|
T Consensus 358 ~ipVia~GGI~~~~di~kala~G--Ad~V~iG~~~l~~~e~~ 397 (514)
T 1jcn_A 358 GVPIIADGGIQTVGHVVKALALG--ASTVMMGSLLAATTEAP 397 (514)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTSTTSS
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCeeeECHHHHcCCcCC
Confidence 57899999994 67888887776 79999999998766443
No 63
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=49.96 E-value=9.9 Score=31.30 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=30.0
Q ss_pred CCCCceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccc
Q psy15542 86 PWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLV 124 (180)
Q Consensus 86 ~g~~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lv 124 (180)
.+++++++++.||+|++.+.+..+.|+ ...+.|+.|+
T Consensus 155 ~p~p~i~~~ptGGI~~~N~~~~l~aGa--~~~vgGs~l~ 191 (217)
T 3lab_A 155 GPFPDIQFCPTGGISKDNYKEYLGLPN--VICAGGSWLT 191 (217)
T ss_dssp TTCTTCEEEEBSSCCTTTHHHHHHSTT--BCCEEESGGG
T ss_pred hhhcCceEEEeCCCCHHHHHHHHHCCC--EEEEEChhhc
Confidence 467899999999999999999999886 3345577675
No 64
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=49.40 E-value=15 Score=30.98 Aligned_cols=38 Identities=18% Similarity=0.311 Sum_probs=31.9
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccCCCC
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTCQRQ 129 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~~~~ 129 (180)
+++++++||++ .+.+.++.+.| .|+..|||.+..+...
T Consensus 162 ~iPViaaGGI~~~~~~~~al~~G--AdgV~vGs~~l~~~e~ 200 (332)
T 2z6i_A 162 SIPVIAAGGIADGEGAAAGFMLG--AEAVQVGTRFVVAKES 200 (332)
T ss_dssp SSCEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHTBTTC
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEecHHHhcCccc
Confidence 46799999997 99998888766 6999999999876643
No 65
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=47.90 E-value=22 Score=30.63 Aligned_cols=45 Identities=20% Similarity=0.371 Sum_probs=35.5
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCCCCCcceeEE
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVY 136 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~Lg~Vy 136 (180)
+++|+++||+ +...+.+....| .|+.+||+.+..+...|.-.+.|
T Consensus 277 ~ipvia~GGI~~~~dv~kalalG--A~~V~iG~~~l~~~es~~~~~~~ 322 (393)
T 2qr6_A 277 YVHIIADGSIENSGDVVKAIACG--ADAVVLGSPLARAEEAAGKGYFW 322 (393)
T ss_dssp CCEEEECSSCCSHHHHHHHHHHT--CSEEEECGGGGGSTTCTTTTEEC
T ss_pred ceEEEEECCCCCHHHHHHHHHcC--CCEEEECHHHHcCCCCCCceEEE
Confidence 3889999999 677787777777 58999999998877666544554
No 66
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=47.24 E-value=24 Score=26.83 Aligned_cols=36 Identities=14% Similarity=0.189 Sum_probs=26.2
Q ss_pred CCCceeEEEeCCCCH--------HHHHHHHHcCCceeEeeeccc
Q psy15542 87 WFAELQIVASNDINE--------ETILSLNEQGHRIDCFGIGTH 122 (180)
Q Consensus 87 g~~~vkIv~Sn~Lde--------~~i~~L~~~g~~id~fGIGT~ 122 (180)
...++-|++|||-+- +.++.+++.|..+-++|||..
T Consensus 114 ~~~~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~~ 157 (202)
T 1ijb_A 114 EASRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPH 157 (202)
T ss_dssp TSEEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTT
T ss_pred CCCeEEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCCc
Confidence 455666889998752 335667778888889999974
No 67
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=45.00 E-value=7.5 Score=30.73 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=27.8
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeecccccc
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
+++|++.+|++++.+.++.+.| .|.+.||+.++.
T Consensus 166 ~~pi~v~GGI~~~~~~~~~~aG--Ad~vvvGsaI~~ 199 (218)
T 3jr2_A 166 GIELSITGGIVPEDIYLFEGIK--TKTFIAGRALAG 199 (218)
T ss_dssp TCEEEEESSCCGGGGGGGTTSC--EEEEEESGGGSH
T ss_pred CCCEEEECCCCHHHHHHHHHcC--CCEEEEchhhcC
Confidence 5678999999999888877755 688999988874
No 68
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=44.79 E-value=13 Score=29.33 Aligned_cols=37 Identities=14% Similarity=0.202 Sum_probs=30.1
Q ss_pred ceeEEEeCCCCH-HHHHHHHHcC-CceeEeeeccccccC
Q psy15542 90 ELQIVASNDINE-ETILSLNEQG-HRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Lde-~~i~~L~~~g-~~id~fGIGT~Lvt~ 126 (180)
+++|+++||++. +.+.++.+.. ..+|++-||+.|...
T Consensus 190 ~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~ 228 (244)
T 1vzw_A 190 DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAK 228 (244)
T ss_dssp SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTT
T ss_pred CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHcC
Confidence 578999999995 9999999861 037999999999754
No 69
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=44.71 E-value=19 Score=30.45 Aligned_cols=38 Identities=16% Similarity=0.334 Sum_probs=31.8
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccCCCC
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTCQRQ 129 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~~~~ 129 (180)
+++|+++||++ .+.+.++.+.| .|+..|||.+..+...
T Consensus 176 ~iPviaaGGI~~~~dv~~al~~G--A~gV~vGs~~~~~~e~ 214 (326)
T 3bo9_A 176 NIPVIAAGGIADGRGMAAAFALG--AEAVQMGTRFVASVES 214 (326)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHTBSSC
T ss_pred CCCEEEECCCCCHHHHHHHHHhC--CCEEEechHHHcCccc
Confidence 46799999997 99998888866 5899999999876543
No 70
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=43.72 E-value=18 Score=29.25 Aligned_cols=35 Identities=20% Similarity=0.275 Sum_probs=30.3
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccC
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
+++|++.+|++ .+.+.++.+.| .|++-|||.++..
T Consensus 201 ~~pI~vgGGI~~~e~~~~~~~~G--AdgvvVGSai~~~ 236 (262)
T 1rd5_A 201 NKPVAVGFGISKPEHVKQIAQWG--ADGVIIGSAMVRQ 236 (262)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEECHHHHHH
T ss_pred CCeEEEECCcCCHHHHHHHHHcC--CCEEEEChHHHhH
Confidence 56799999999 99999999866 5889999998753
No 71
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=43.43 E-value=48 Score=28.02 Aligned_cols=38 Identities=16% Similarity=0.224 Sum_probs=28.8
Q ss_pred CCceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 88 FAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 88 ~~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
-..+.|.-||=-+.+.+..+.+.| +|+|=||++|+...
T Consensus 203 ~~~~~VsESGI~t~~dv~~l~~~G--~~a~LVGealmr~~ 240 (258)
T 4a29_A 203 SNVVKVAKLGISERNEIEELRKLG--VNAFLISSSLMRNP 240 (258)
T ss_dssp TTSEEEEEESSCCHHHHHHHHHTT--CCEEEECHHHHHCT
T ss_pred CCCEEEEcCCCCCHHHHHHHHHCC--CCEEEECHHHhCCC
Confidence 344545555666889999999866 79999999998754
No 72
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=41.93 E-value=30 Score=28.30 Aligned_cols=35 Identities=20% Similarity=0.194 Sum_probs=30.5
Q ss_pred ceeEEEeCCCCHHHHHHHHH--cCCceeEeeeccccccC
Q psy15542 90 ELQIVASNDINEETILSLNE--QGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~--~g~~id~fGIGT~Lvt~ 126 (180)
++.|.+-||+|++.+..+.+ .| +|.|=+|+.+...
T Consensus 187 ~~~I~vdGGI~~~~~~~~~~~~aG--ad~~VvGSaIf~~ 223 (237)
T 3cu2_A 187 EKLINIDGSMTLELAKYFKQGTHQ--IDWLVSGSALFSG 223 (237)
T ss_dssp GCEEEEESSCCHHHHHHHHHSSSC--CCCEEECGGGGSS
T ss_pred CceEEEECCcCHHHHHHHHHhCCC--CcEEEEeeHHhCC
Confidence 46799999999999999998 66 6889999999764
No 73
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=41.71 E-value=25 Score=25.71 Aligned_cols=33 Identities=15% Similarity=0.137 Sum_probs=24.1
Q ss_pred CCceeEEEeCCCC--------HHHHHHHHHcCCceeEeeec
Q psy15542 88 FAELQIVASNDIN--------EETILSLNEQGHRIDCFGIG 120 (180)
Q Consensus 88 ~~~vkIv~Sn~Ld--------e~~i~~L~~~g~~id~fGIG 120 (180)
..++-|++|||-+ .+.+..+++.|..+-++|||
T Consensus 106 ~~~~iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~igvg 146 (185)
T 3n2n_F 106 TASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVK 146 (185)
T ss_dssp EEEEEEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEECS
T ss_pred CCcEEEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEEec
Confidence 3456699999987 34556667777777788888
No 74
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=41.69 E-value=23 Score=30.62 Aligned_cols=40 Identities=20% Similarity=0.368 Sum_probs=32.9
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccCCCCCc
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTCQRQPA 131 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~ 131 (180)
++.|+++||+. .+.+.+....| .|+.+|||.+..+...|.
T Consensus 256 ~ipVia~GGI~~~~d~~~ala~G--Ad~V~iG~~~l~~~e~~~ 296 (404)
T 1eep_A 256 NICIIADGGIRFSGDVVKAIAAG--ADSVMIGNLFAGTKESPS 296 (404)
T ss_dssp SCEEEEESCCCSHHHHHHHHHHT--CSEEEECHHHHTBTTSSS
T ss_pred CceEEEECCCCCHHHHHHHHHcC--CCHHhhCHHHhcCCCCCc
Confidence 68899999995 78888888777 699999999987765543
No 75
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=41.10 E-value=28 Score=26.82 Aligned_cols=38 Identities=8% Similarity=0.114 Sum_probs=27.0
Q ss_pred CCCCceeEEEeCCCCH------HHHHHHHHcCCceeEeeecccc
Q psy15542 86 PWFAELQIVASNDINE------ETILSLNEQGHRIDCFGIGTHL 123 (180)
Q Consensus 86 ~g~~~vkIv~Sn~Lde------~~i~~L~~~g~~id~fGIGT~L 123 (180)
++..++-|++|||-+. +.+..+++.|..+-++|||+..
T Consensus 122 ~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~v~~igvG~~~ 165 (223)
T 2b2x_A 122 RGVKKVMVIVTDGESHDNYRLKQVIQDCEDENIQRFSIAILGHY 165 (223)
T ss_dssp TTSEEEEEEEESSCCTTGGGHHHHHHHHHTTTEEEEEEEECGGG
T ss_pred CCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEecCcc
Confidence 3455666889988763 3456667777778899999753
No 76
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=40.81 E-value=17 Score=27.15 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=26.9
Q ss_pred CCceeEEEeCCCCH-------HHHHHHHHcCCceeEeeecccc
Q psy15542 88 FAELQIVASNDINE-------ETILSLNEQGHRIDCFGIGTHL 123 (180)
Q Consensus 88 ~~~vkIv~Sn~Lde-------~~i~~L~~~g~~id~fGIGT~L 123 (180)
..++-|++|||-+- +.++.+++.|..+-++|||...
T Consensus 106 ~~~~iillTDG~~~~d~~~~~~~~~~~~~~gi~v~~igvG~~~ 148 (194)
T 1mf7_A 106 AFKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAF 148 (194)
T ss_dssp SEEEEEEEESSCCBSCSSCGGGTHHHHHHTTEEEEEEEESGGG
T ss_pred CCeEEEEEcCCCCCCCchhhHHHHHHHHHCCCEEEEEEecccc
Confidence 45666888887643 4577888888888899999864
No 77
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=40.50 E-value=18 Score=28.40 Aligned_cols=37 Identities=14% Similarity=0.301 Sum_probs=30.2
Q ss_pred ceeEEEeCCCCH-HHHHHHHHcCC-ceeEeeeccccccC
Q psy15542 90 ELQIVASNDINE-ETILSLNEQGH-RIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Lde-~~i~~L~~~g~-~id~fGIGT~Lvt~ 126 (180)
+++|+++||++. +.+.++.+... .+|++-||+.+...
T Consensus 193 ~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~ 231 (244)
T 2y88_A 193 DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYAR 231 (244)
T ss_dssp SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTT
T ss_pred CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCC
Confidence 678999999995 99999987610 37999999998754
No 78
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=40.03 E-value=22 Score=29.30 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=29.1
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeecccccc
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
++.|+++||+ +.+.+.++.+.| .|..+|||.+..
T Consensus 242 ~ipvi~~GGI~~~~da~~~l~~G--Ad~V~vg~~~l~ 276 (311)
T 1jub_A 242 EIQIIGTGGIETGQDAFEHLLCG--ATMLQIGTALHK 276 (311)
T ss_dssp TSEEEEESSCCSHHHHHHHHHHT--CSEEEECHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CCEEEEchHHHh
Confidence 7889999999 778888877766 699999999874
No 79
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=39.92 E-value=39 Score=30.55 Aligned_cols=40 Identities=13% Similarity=0.296 Sum_probs=33.3
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCCCCCc
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQRQPA 131 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~ 131 (180)
++.|+++||+ +...|.+....| .|+..+|+.|..+...|.
T Consensus 359 ~iPVIa~GGI~~~~di~kala~G--A~~V~vGs~~~~~~es~g 399 (511)
T 3usb_A 359 GIPVIADGGIKYSGDMVKALAAG--AHVVMLGSMFAGVAESPG 399 (511)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSSS
T ss_pred CCcEEEeCCCCCHHHHHHHHHhC--chhheecHHHhcCccCch
Confidence 3789999999 888888887776 689999999987776665
No 80
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=39.83 E-value=36 Score=24.75 Aligned_cols=35 Identities=14% Similarity=0.171 Sum_probs=24.1
Q ss_pred CCCceeEEEeCCCC--------HHHHHHHHHcCCceeEeeecc
Q psy15542 87 WFAELQIVASNDIN--------EETILSLNEQGHRIDCFGIGT 121 (180)
Q Consensus 87 g~~~vkIv~Sn~Ld--------e~~i~~L~~~g~~id~fGIGT 121 (180)
+..++-|++|||.+ .+.+..+.+.|..+-++|||.
T Consensus 102 ~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igvg~ 144 (182)
T 1shu_X 102 KTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLD 144 (182)
T ss_dssp GSCEEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCeEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeCCc
Confidence 44566688898874 224455667788888899983
No 81
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=39.34 E-value=25 Score=29.26 Aligned_cols=35 Identities=17% Similarity=0.299 Sum_probs=29.0
Q ss_pred eeEE--EeCCC-CHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 91 LQIV--ASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 91 vkIv--~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++|+ ++||+ +.+.+.++.+.| +|++.||+.+....
T Consensus 208 iPvi~~a~GGI~~~~d~~~~~~~G--adgV~vGsai~~~~ 245 (305)
T 2nv1_A 208 LPVVNFAAGGVATPADAALMMQLG--ADGVFVGSGIFKSD 245 (305)
T ss_dssp CSSCEEBCSCCCSHHHHHHHHHTT--CSCEEECGGGGGSS
T ss_pred CCEEEEeccCCCCHHHHHHHHHcC--CCEEEEcHHHHcCC
Confidence 4455 99999 999999999865 68999999998643
No 82
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=38.64 E-value=32 Score=27.60 Aligned_cols=38 Identities=21% Similarity=0.372 Sum_probs=27.9
Q ss_pred CCCCceeEEEeCCCCH------HHHHHHHHcCCceeEeeecccc
Q psy15542 86 PWFAELQIVASNDINE------ETILSLNEQGHRIDCFGIGTHL 123 (180)
Q Consensus 86 ~g~~~vkIv~Sn~Lde------~~i~~L~~~g~~id~fGIGT~L 123 (180)
++..++-|++|||-+- +.+..+++.|..+-++|||...
T Consensus 123 ~~~~~~iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG~~~ 166 (266)
T 4hqo_A 123 EKAIQLVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQGI 166 (266)
T ss_dssp TTSEEEEEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECSSSC
T ss_pred CCCCeEEEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecCccc
Confidence 4456777999998743 4456667788888899999854
No 83
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=38.35 E-value=30 Score=27.52 Aligned_cols=36 Identities=22% Similarity=0.146 Sum_probs=28.7
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
+++|++++|+. .+.+.++.+.| +|++-||+.|....
T Consensus 200 ~ipvia~GGI~~~ed~~~~~~~G--adgv~vgsal~~~~ 236 (266)
T 2w6r_A 200 TLPIIASGGAGKMEHFLEAFLAG--ADAALAASVFHFRE 236 (266)
T ss_dssp CSCEEEESCCCSHHHHHHHHHHT--CSEEEESTTTC---
T ss_pred CCCEEEeCCCCCHHHHHHHHHcC--CHHHHccHHHHcCC
Confidence 67899999999 59999998755 68999999997543
No 84
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=37.81 E-value=17 Score=30.17 Aligned_cols=35 Identities=14% Similarity=0.332 Sum_probs=29.7
Q ss_pred eeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 91 LQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 91 vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
+.|.+-||++++++..+.+.| +|.|=+|+.+....
T Consensus 196 ~~I~VDGGI~~~ti~~~~~aG--AD~~V~GSaIf~a~ 230 (246)
T 3inp_A 196 ILLEIDGGVNPYNIAEIAVCG--VNAFVAGSAIFNSD 230 (246)
T ss_dssp CEEEEESSCCTTTHHHHHTTT--CCEEEESHHHHTSS
T ss_pred eeEEEECCcCHHHHHHHHHcC--CCEEEEehHHhCCC
Confidence 569999999999999999876 58888999887543
No 85
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=37.73 E-value=25 Score=29.78 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=31.6
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.|++.|++ +.+.+.++.+.|. +|..++|+.+...+
T Consensus 277 ~iPVi~~Ggi~s~~~a~~~l~~G~-aD~V~iGR~~i~nP 314 (338)
T 1z41_A 277 DMATGAVGMITDGSMAEEILQNGR-ADLIFIGRELLRDP 314 (338)
T ss_dssp CCEEEECSSCCSHHHHHHHHHTTS-CSEEEECHHHHHCT
T ss_pred CCCEEEECCCCCHHHHHHHHHcCC-ceEEeecHHHHhCc
Confidence 4679999999 7999999998774 79999999997653
No 86
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=37.24 E-value=39 Score=30.44 Aligned_cols=41 Identities=17% Similarity=0.339 Sum_probs=33.6
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCCCCCcc
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQRQPAL 132 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~L 132 (180)
++.|+++||+ +.+.|.+....| .|+..+||.|..+...|.-
T Consensus 334 ~iPVIa~GGI~~~~di~kala~G--Ad~V~iGs~f~~t~Espg~ 375 (496)
T 4fxs_A 334 GIPVIADGGIRFSGDISKAIAAG--ASCVMVGSMFAGTEEAPGE 375 (496)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSSSC
T ss_pred CCeEEEeCCCCCHHHHHHHHHcC--CCeEEecHHHhcCCCCCcc
Confidence 4789999999 688888887777 5899999999987766653
No 87
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=37.19 E-value=33 Score=27.60 Aligned_cols=36 Identities=25% Similarity=0.489 Sum_probs=27.3
Q ss_pred CCCceeEEEeCCCCH------HHHHHHHHcCCceeEeeeccc
Q psy15542 87 WFAELQIVASNDINE------ETILSLNEQGHRIDCFGIGTH 122 (180)
Q Consensus 87 g~~~vkIv~Sn~Lde------~~i~~L~~~g~~id~fGIGT~ 122 (180)
+..++-|++|||.+- +.+..+++.|..|-++|||..
T Consensus 127 ~~~~~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~~ 168 (281)
T 4hqf_A 127 NANQLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQG 168 (281)
T ss_dssp TCEEEEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESSS
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 356677999999753 345666778888889999986
No 88
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=37.12 E-value=79 Score=27.59 Aligned_cols=39 Identities=28% Similarity=0.307 Sum_probs=32.9
Q ss_pred eEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCCCCCcc
Q psy15542 92 QIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQRQPAL 132 (180)
Q Consensus 92 kIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~L 132 (180)
.|++.||+ +...+......| .|+..||+.|..+...|.-
T Consensus 201 PVIAdGGI~~~~di~kALa~G--Ad~V~iGr~f~~t~Espg~ 240 (361)
T 3r2g_A 201 SIVADGGIKTSGDIVKALAFG--ADFVMIGGMLAGSAPTPGE 240 (361)
T ss_dssp EEEEESCCCSHHHHHHHHHTT--CSEEEESGGGTTBTTSSSC
T ss_pred CEEEECCCCCHHHHHHHHHcC--CCEEEEChHHhCCccCCce
Confidence 79999999 588888888777 5899999999988777764
No 89
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=37.07 E-value=34 Score=25.73 Aligned_cols=35 Identities=9% Similarity=-0.036 Sum_probs=24.8
Q ss_pred CCCceeEEEeCCCCH------HHHHHHHHcCCceeEeeecc
Q psy15542 87 WFAELQIVASNDINE------ETILSLNEQGHRIDCFGIGT 121 (180)
Q Consensus 87 g~~~vkIv~Sn~Lde------~~i~~L~~~g~~id~fGIGT 121 (180)
+..++-|++|||-+. +.+..+++.|..+-++|||+
T Consensus 107 ~~~~~ivllTDG~~~~~~~~~~~~~~~~~~gi~i~~igvg~ 147 (200)
T 1v7p_C 107 SATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLG 147 (200)
T ss_dssp TSEEEEEEEESSCCSCGGGHHHHHHHHHHTTEEEEEEEECH
T ss_pred CCCeEEEEEccCCCCCcccHHHHHHHHHHCCCEEEEEEecc
Confidence 445666888887652 45677777887788889965
No 90
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=36.28 E-value=23 Score=29.19 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=29.5
Q ss_pred CceeEEEeCCCC-HHHHHHHHHcCCceeEeeecccccc
Q psy15542 89 AELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 89 ~~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
+++.|+++||+. .+.+.++.+.| .|..+|||.+..
T Consensus 243 ~~ipvi~~GGI~~~~da~~~l~~G--Ad~V~ig~~~l~ 278 (314)
T 2e6f_A 243 PDKLVFGCGGVYSGEDAFLHILAG--ASMVQVGTALQE 278 (314)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHHT--CSSEEECHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHHcC--CCEEEEchhhHh
Confidence 478899999995 88888877767 689999999974
No 91
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=36.20 E-value=30 Score=27.27 Aligned_cols=35 Identities=23% Similarity=0.134 Sum_probs=29.5
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccC
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
+++|++++|++ .+.+.++.+.| +|++=||+.+...
T Consensus 195 ~ipvia~GGI~~~~d~~~~~~~G--adgv~vGsal~~~ 230 (253)
T 1thf_D 195 TLPIIASGGAGKMEHFLEAFLAG--ADAALAASVFHFR 230 (253)
T ss_dssp CSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTT
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--ChHHHHHHHHHcC
Confidence 57899999999 59999998754 6889999999754
No 92
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=36.18 E-value=15 Score=29.59 Aligned_cols=36 Identities=11% Similarity=0.205 Sum_probs=31.0
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
+++|.+-||+|++.+.++.+.| +|.+=+|+.+....
T Consensus 173 ~~~I~v~GGI~~~~~~~~~~aG--ad~vvvGSai~~a~ 208 (230)
T 1tqj_A 173 DPWIEVDGGLKPNNTWQVLEAG--ANAIVAGSAVFNAP 208 (230)
T ss_dssp CCEEEEESSCCTTTTHHHHHHT--CCEEEESHHHHTSS
T ss_pred CCcEEEECCcCHHHHHHHHHcC--CCEEEECHHHHCCC
Confidence 5679999999999999999876 58999999998643
No 93
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=36.17 E-value=36 Score=25.86 Aligned_cols=37 Identities=5% Similarity=0.057 Sum_probs=26.2
Q ss_pred CCCCceeEEEeCCCCH------HHHHHHHHcCCceeEeeeccc
Q psy15542 86 PWFAELQIVASNDINE------ETILSLNEQGHRIDCFGIGTH 122 (180)
Q Consensus 86 ~g~~~vkIv~Sn~Lde------~~i~~L~~~g~~id~fGIGT~ 122 (180)
++..++-|++|||-+- +.+..+++.|..+-++|||+.
T Consensus 107 ~~~~~~iillTDG~~~~~~~~~~~~~~~~~~gi~i~~igig~~ 149 (213)
T 1pt6_A 107 RGVKKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAILGS 149 (213)
T ss_dssp TTCEEEEEEEESSCCSCSHHHHHHHHHHHHTTEEEEEEEECHH
T ss_pred CCCCeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEeccc
Confidence 3455666888888753 345667778878889999974
No 94
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=35.80 E-value=29 Score=27.85 Aligned_cols=36 Identities=17% Similarity=0.283 Sum_probs=26.4
Q ss_pred ceeEEEeCCCC---HHH----HHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDIN---EET----ILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Ld---e~~----i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
+++++++||++ .+. +..+.+.| ++++.||+.+....
T Consensus 202 ~ipvva~GGi~~~~~~~~~~~~~~~~~~G--a~gv~vg~~i~~~~ 244 (273)
T 2qjg_A 202 PAPVVVAGGPKTNTDEEFLQMIKDAMEAG--AAGVAVGRNIFQHD 244 (273)
T ss_dssp SSCEEEECCSCCSSHHHHHHHHHHHHHHT--CSEEECCHHHHTSS
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHcC--CcEEEeeHHhhCCC
Confidence 46799999998 454 55555655 47999999997543
No 95
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=34.62 E-value=28 Score=29.61 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=28.8
Q ss_pred EEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 93 IVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 93 Iv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
+++.+|+ +.+.+..+.+.| +|++-||+.|..+.
T Consensus 212 vvA~GGI~t~~dv~~~~~~G--AdgVlVGsai~~a~ 245 (297)
T 4adt_A 212 NFAAGGIATPADAAMCMQLG--MDGVFVGSGIFESE 245 (297)
T ss_dssp EEEESCCCSHHHHHHHHHTT--CSCEEESHHHHTSS
T ss_pred EEecCCCCCHHHHHHHHHcC--CCEEEEhHHHHcCC
Confidence 4699999 999999999876 69999999998654
No 96
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=33.88 E-value=31 Score=29.49 Aligned_cols=37 Identities=16% Similarity=0.142 Sum_probs=31.2
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.|++.|++ +.+.+.++.+.|. +|..++|+.+...+
T Consensus 277 ~iPVi~~GgI~s~e~a~~~L~~G~-aD~V~iGR~~lanP 314 (340)
T 3gr7_A 277 DIPTGAVGLITSGWQAEEILQNGR-ADLVFLGRELLRNP 314 (340)
T ss_dssp TCCEEEESSCCCHHHHHHHHHTTS-CSEEEECHHHHHCT
T ss_pred CCcEEeeCCCCCHHHHHHHHHCCC-eeEEEecHHHHhCc
Confidence 4679999999 6899999988774 79999999998654
No 97
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=33.79 E-value=26 Score=29.95 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=29.8
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.|+++||+ +.+.+.++.+ | +|+..||+.+..++
T Consensus 197 ~iPVianGgI~s~eda~~~l~-G--aD~V~iGRa~l~~P 232 (350)
T 3b0p_A 197 QLTFVTNGGIRSLEEALFHLK-R--VDGVMLGRAVYEDP 232 (350)
T ss_dssp TSEEEEESSCCSHHHHHHHHT-T--SSEEEECHHHHHCG
T ss_pred CCeEEEECCcCCHHHHHHHHh-C--CCEEEECHHHHhCc
Confidence 6789999998 7899998886 5 89999999887544
No 98
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=33.78 E-value=1.1e+02 Score=25.66 Aligned_cols=31 Identities=10% Similarity=0.221 Sum_probs=21.3
Q ss_pred EEEeCCC---CHHHHHH----HHHcCCceeEeeecccc
Q psy15542 93 IVASNDI---NEETILS----LNEQGHRIDCFGIGTHL 123 (180)
Q Consensus 93 Iv~Sn~L---de~~i~~----L~~~g~~id~fGIGT~L 123 (180)
|+++++- |+..+.. +++.+..++.+|+|+.=
T Consensus 111 Ilf~ds~~~~~~~~l~~lak~lkk~gI~v~vIgFG~~~ 148 (268)
T 4b4t_W 111 VAFVCSPISDSRDELIRLAKTLKKNNVAVDIINFGEIE 148 (268)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHHTEEEEEEEESSCC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEEeCCCc
Confidence 7777553 5555444 45678889999999743
No 99
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=32.83 E-value=37 Score=28.96 Aligned_cols=37 Identities=24% Similarity=0.187 Sum_probs=31.1
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.|++.|++ +.+.+.++.+.|. +|..++|+.+...+
T Consensus 288 ~iPVi~~Ggi~t~e~a~~~l~~G~-aD~V~iGR~~lanP 325 (349)
T 3hgj_A 288 GLRTGAVGLITTPEQAETLLQAGS-ADLVLLGRVLLRDP 325 (349)
T ss_dssp CCEEEECSSCCCHHHHHHHHHTTS-CSEEEESTHHHHCT
T ss_pred CceEEEECCCCCHHHHHHHHHCCC-ceEEEecHHHHhCc
Confidence 4679999998 6999999988774 79999999987654
No 100
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=32.44 E-value=19 Score=29.53 Aligned_cols=39 Identities=15% Similarity=0.231 Sum_probs=23.7
Q ss_pred EEeeeecc-cc-ccCCCC----CCceeEEEeCCCCHHHHHHHHHc
Q psy15542 72 MALVDTYD-VK-RYNIPW----FAELQIVASNDINEETILSLNEQ 110 (180)
Q Consensus 72 i~LvDTYd-~~-~Ld~~g----~~~vkIv~Sn~Lde~~i~~L~~~ 110 (180)
..|.||+. +- .||-.. ..+.+++.+||||++-+.+..++
T Consensus 149 ~~LlDs~GGtG~~fDW~~~~~~~~~~p~iLAGGL~peNV~~Ai~~ 193 (228)
T 4aaj_A 149 MVLLDTGAGSGKLHDLRVSSLVARKIPVIVAGGLNAENVEEVIKV 193 (228)
T ss_dssp EEEEEC-------CCCHHHHHHHHHSCEEEESSCCTTTHHHHHHH
T ss_pred EEccCCCCCCcCcCChHHHHHhhhcCCeEEECCCCHHHHHHHHHH
Confidence 46779983 21 233211 12457999999999999887664
No 101
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=31.95 E-value=9.7 Score=30.39 Aligned_cols=36 Identities=31% Similarity=0.287 Sum_probs=0.0
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
+++++++||+. .+.+.++.+.| +|+.-||+.|...+
T Consensus 200 ~iPvia~GGI~~~~d~~~~~~~G--ad~v~vg~al~~~p 236 (247)
T 3tdn_A 200 TLPIIASGGAGKMEHFLEAFLRG--ADKVSINTAAVENP 236 (247)
T ss_dssp ---------------------------------------
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CcHhhccHHHHcCc
Confidence 56799999997 88899998876 78889999887543
No 102
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=31.62 E-value=93 Score=26.65 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=31.8
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccCCCCCc
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTCQRQPA 131 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~~~~p~ 131 (180)
++.|+++||+. ...+.+....| .|+.+|||.+..+...|.
T Consensus 223 ~ipvIa~GGI~~g~di~kAlalG--A~~V~vG~~fl~~~Es~~ 263 (351)
T 2c6q_A 223 KGHIISDGGCSCPGDVAKAFGAG--ADFVMLGGMLAGHSESGG 263 (351)
T ss_dssp TCEEEEESCCCSHHHHHHHHHTT--CSEEEESTTTTTBTTSCS
T ss_pred CCcEEEeCCCCCHHHHHHHHHcC--CCceeccHHHhcCccCcc
Confidence 47899999987 77777777767 589999999988765554
No 103
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=31.01 E-value=63 Score=23.88 Aligned_cols=35 Identities=11% Similarity=0.204 Sum_probs=23.5
Q ss_pred CCceeEEEeCCCC----HHHHHHHHHcCCceeEeeeccc
Q psy15542 88 FAELQIVASNDIN----EETILSLNEQGHRIDCFGIGTH 122 (180)
Q Consensus 88 ~~~vkIv~Sn~Ld----e~~i~~L~~~g~~id~fGIGT~ 122 (180)
..++-|++++|-. .+.+..+++.|..+-++|||..
T Consensus 108 ~~~~vivltdg~~~~~~~~~~~~~~~~gi~v~~igvG~~ 146 (189)
T 1atz_A 108 ASKAVVILVTDVSVDSVDAAADAARSNRVTVFPIGIGDR 146 (189)
T ss_dssp SEEEEEEEECSCCSSCCHHHHHHHHHTTEEEEEEEESSS
T ss_pred CCcEEEEEeCCCCCchHHHHHHHHHHCCCEEEEEEcCCc
Confidence 3443366666543 4556677778888889999985
No 104
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=30.81 E-value=38 Score=29.17 Aligned_cols=37 Identities=16% Similarity=0.247 Sum_probs=31.8
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.|++.|+++.+.+.++.++|. +|..++|+.+...+
T Consensus 293 ~iPvi~~Ggi~~~~a~~~l~~g~-aD~V~igR~~i~~P 329 (365)
T 2gou_A 293 QGVLIYAGRYNAEKAEQAINDGL-ADMIGFGRPFIANP 329 (365)
T ss_dssp CSEEEEESSCCHHHHHHHHHTTS-CSEEECCHHHHHCT
T ss_pred CCcEEEeCCCCHHHHHHHHHCCC-cceehhcHHHHhCc
Confidence 46799999999999999998764 79999999998653
No 105
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=30.30 E-value=57 Score=29.40 Aligned_cols=68 Identities=16% Similarity=0.240 Sum_probs=46.8
Q ss_pred ccHHHHHHHHHHHCCCCeEEeeeecccc-------------------------------cc-CCCCCCceeEEEeCCCC-
Q psy15542 54 DGELAALISYAIAFPDGFMALVDTYDVK-------------------------------RY-NIPWFAELQIVASNDIN- 100 (180)
Q Consensus 54 ~~E~~Af~aya~~fP~~~i~LvDTYd~~-------------------------------~L-d~~g~~~vkIv~Sn~Ld- 100 (180)
+.+++.|..++... +..+|+|+.+.. +| ..-+- ++.+|+-+|++
T Consensus 143 ~~~l~~l~~~a~~l--gm~~LvEvh~~eE~~~A~~lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~-~~~vIaEsGI~t 219 (452)
T 1pii_A 143 DDQYRQLAAVAHSL--EMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGH-NVTVISESGINT 219 (452)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHTTCSEEEEESEETTTTEECTHHHHHHHHHHCT-TSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCC-CCeEEEECCCCC
Confidence 45688888888886 577888888766 01 00011 33466666665
Q ss_pred HHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 101 EETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 101 e~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
.+.+..+.+ + +|+|-||+.|+...
T Consensus 220 ~edv~~~~~--~-a~avLVGealmr~~ 243 (452)
T 1pii_A 220 YAQVRELSH--F-ANGFLIGSALMAHD 243 (452)
T ss_dssp HHHHHHHTT--T-CSEEEECHHHHTCS
T ss_pred HHHHHHHHH--h-CCEEEEcHHHcCCc
Confidence 888888876 4 89999999998543
No 106
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=29.87 E-value=1.4e+02 Score=20.76 Aligned_cols=66 Identities=15% Similarity=0.040 Sum_probs=41.4
Q ss_pred ccceeeecccHHHHHHHHHHHCCCCeEEeeeecccc--------ccCC-CCCCceeEEEeCCCCHHHHHHHHHcCC
Q psy15542 46 DVLTDEASDGELAALISYAIAFPDGFMALVDTYDVK--------RYNI-PWFAELQIVASNDINEETILSLNEQGH 112 (180)
Q Consensus 46 ~~~~~~~~~~E~~Af~aya~~fP~~~i~LvDTYd~~--------~Ld~-~g~~~vkIv~Sn~Lde~~i~~L~~~g~ 112 (180)
|........+-.+|+....+..|.--++|+|..-.. .+.. .+...+ |++|+.-+.+.+.+..+.|+
T Consensus 60 g~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~i-i~ls~~~~~~~~~~~~~~g~ 134 (157)
T 3hzh_A 60 GFNIIDTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARV-IMISALGKEQLVKDCLIKGA 134 (157)
T ss_dssp TCEEEEEESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCE-EEEESCCCHHHHHHHHHTTC
T ss_pred CCeEEEEECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcE-EEEeccCcHHHHHHHHHcCC
Confidence 554443566667888887777432236777875222 1211 223345 88999999999988888764
No 107
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=29.46 E-value=45 Score=26.17 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=29.2
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++++++++|+. .+.+.++.+.| +|+.=||+.|....
T Consensus 196 ~ipvia~GGI~~~~d~~~~~~~G--adgv~vgsal~~~~ 232 (252)
T 1ka9_F 196 GVPVIASGGAGRMEHFLEAFQAG--AEAALAASVFHFGE 232 (252)
T ss_dssp SSCEEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTTS
T ss_pred CCCEEEeCCCCCHHHHHHHHHCC--CHHHHHHHHHHcCC
Confidence 56799999999 58999988744 68889999987543
No 108
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=29.45 E-value=37 Score=28.33 Aligned_cols=34 Identities=15% Similarity=0.112 Sum_probs=27.9
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeecccccc
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
++.|+++||+ +.+.+.+..+.| .|..+|||.+..
T Consensus 289 ~ipVi~~GGI~~~~da~~~l~~G--Ad~V~igr~~l~ 323 (336)
T 1f76_A 289 RLPIIGVGGIDSVIAAREKIAAG--ASLVQIYSGFIF 323 (336)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEESHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHCC--CCEEEeeHHHHh
Confidence 6789999999 478888887777 699999998753
No 109
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=29.14 E-value=1.3e+02 Score=20.20 Aligned_cols=53 Identities=6% Similarity=-0.002 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHCCCCeEEeeeecccc--ccCCCCCCceeE---------EEeCCCCHHHHHHHH
Q psy15542 56 ELAALISYAIAFPDGFMALVDTYDVK--RYNIPWFAELQI---------VASNDINEETILSLN 108 (180)
Q Consensus 56 E~~Af~aya~~fP~~~i~LvDTYd~~--~Ld~~g~~~vkI---------v~Sn~Lde~~i~~L~ 108 (180)
..+.+++|++.+.-++-.+.|..... .+++.+.+.+-| ...+..+.+.+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 140 (148)
T 2b5x_A 77 DPGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRV 140 (148)
T ss_dssp SHHHHHHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHH
T ss_pred CHHHHHHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHH
Confidence 46778888888876666677765433 566666655422 133556666555543
No 110
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=28.72 E-value=37 Score=29.15 Aligned_cols=37 Identities=8% Similarity=0.154 Sum_probs=31.3
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.|++.|++ +.+.+.++.+.|. +|..++|+.+...+
T Consensus 295 ~iPVi~~GgI~s~e~a~~~l~~G~-aD~V~iGR~~lanP 332 (363)
T 3l5l_A 295 KLPVTSAWGFGTPQLAEAALQANQ-LDLVSVGRAHLADP 332 (363)
T ss_dssp TCCEEECSSTTSHHHHHHHHHTTS-CSEEECCHHHHHCT
T ss_pred CCcEEEeCCCCCHHHHHHHHHCCC-ccEEEecHHHHhCc
Confidence 4679999999 6999999988774 79999999998654
No 111
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=28.47 E-value=31 Score=27.87 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=29.9
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
+..|.+-||++++++..+.+.| +|.+=+|+.+...
T Consensus 169 ~~~I~VdGGI~~~t~~~~~~aG--Ad~~VvGsaIf~a 203 (228)
T 3ovp_A 169 SLDIEVDGGVGPDTVHKCAEAG--ANMIVSGSAIMRS 203 (228)
T ss_dssp TCEEEEESSCSTTTHHHHHHHT--CCEEEESHHHHTC
T ss_pred CCCEEEeCCcCHHHHHHHHHcC--CCEEEEeHHHhCC
Confidence 4679999999999999999977 5788899988754
No 112
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=28.10 E-value=47 Score=28.84 Aligned_cols=37 Identities=5% Similarity=0.136 Sum_probs=31.8
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.|++.|+++.+.+.++.++|. +|..++|..+...+
T Consensus 299 ~iPvi~~Ggi~~~~a~~~l~~g~-aD~V~igR~~l~~P 335 (377)
T 2r14_A 299 KGGLIYCGNYDAGRAQARLDDNT-ADAVAFGRPFIANP 335 (377)
T ss_dssp CSEEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCCEEEECCCCHHHHHHHHHCCC-ceEEeecHHHHhCc
Confidence 45799999999999999998764 79999999998654
No 113
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=28.09 E-value=43 Score=29.09 Aligned_cols=36 Identities=8% Similarity=0.196 Sum_probs=31.2
Q ss_pred eeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 91 LQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 91 vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
+.|++.|+++.+.+.++.+.|. +|..++|..+...+
T Consensus 280 iPvi~~Ggit~e~a~~~l~~g~-aD~V~iGR~~lanP 315 (362)
T 4ab4_A 280 GPYIVNERFDKASANAALASGK-ADAVAFGVPFIANP 315 (362)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCEEEeCCCCHHHHHHHHHcCC-ccEEEECHHhHhCc
Confidence 4699999999999999998774 79999999998654
No 114
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=27.99 E-value=43 Score=29.06 Aligned_cols=36 Identities=8% Similarity=0.215 Sum_probs=31.3
Q ss_pred eeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 91 LQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 91 vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
+.|++.|+++.+.+.++.+.|. +|..++|..+...+
T Consensus 288 iPvi~~Ggit~e~a~~~l~~G~-aD~V~iGR~~ladP 323 (361)
T 3gka_A 288 GPFIVNENFTLDSAQAALDAGQ-ADAVAWGKLFIANP 323 (361)
T ss_dssp SCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCEEEeCCCCHHHHHHHHHcCC-ccEEEECHHhHhCc
Confidence 4699999999999999998774 79999999998654
No 115
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=27.80 E-value=48 Score=28.53 Aligned_cols=37 Identities=19% Similarity=0.268 Sum_probs=31.7
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.|++.|+++.+.+.++.++|. +|..++|..+...+
T Consensus 294 ~iPvi~~Ggit~~~a~~~l~~g~-aD~V~~gR~~l~~P 330 (364)
T 1vyr_A 294 HGVIIGAGAYTAEKAEDLIGKGL-IDAVAFGRDYIANP 330 (364)
T ss_dssp CSEEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCCEEEECCcCHHHHHHHHHCCC-ccEEEECHHHHhCh
Confidence 46799999999999999998764 79999999987644
No 116
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=27.56 E-value=58 Score=25.56 Aligned_cols=38 Identities=13% Similarity=0.288 Sum_probs=29.6
Q ss_pred ceeEEEeCCCC-HHHHHHHHHc---CCc-eeEeeeccccccCC
Q psy15542 90 ELQIVASNDIN-EETILSLNEQ---GHR-IDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~---g~~-id~fGIGT~Lvt~~ 127 (180)
++++++++|+. .+.+.++.+. +.. +|+.=||+.|....
T Consensus 188 ~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~ 230 (241)
T 1qo2_A 188 EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGI 230 (241)
T ss_dssp TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTS
T ss_pred CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCC
Confidence 57899999999 5999998875 113 78899999987543
No 117
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=26.64 E-value=1.4e+02 Score=22.38 Aligned_cols=65 Identities=15% Similarity=0.100 Sum_probs=44.2
Q ss_pred HHHHHHHHHHCCCCeEEeeeecccc---------ccCCCCCCceeEEEeCCCCHHHHHHHHHcCCcee-Eeeecccc
Q psy15542 57 LAALISYAIAFPDGFMALVDTYDVK---------RYNIPWFAELQIVASNDINEETILSLNEQGHRID-CFGIGTHL 123 (180)
Q Consensus 57 ~~Af~aya~~fP~~~i~LvDTYd~~---------~Ld~~g~~~vkIv~Sn~Lde~~i~~L~~~g~~id-~fGIGT~L 123 (180)
.+.+.+.++.+....++|.=+..+- .|...+..+++|++-|.+-.+....+.+.| +| .|+-||.+
T Consensus 58 ~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G--~d~v~~~~~~~ 132 (161)
T 2yxb_A 58 PEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLG--IREIFLPGTSL 132 (161)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTT--CCEEECTTCCH
T ss_pred HHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCC--CcEEECCCCCH
Confidence 4556666666655555554322111 666677777999999999888887788766 57 49999875
No 118
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=25.65 E-value=66 Score=24.94 Aligned_cols=31 Identities=19% Similarity=0.261 Sum_probs=20.9
Q ss_pred EEEeCCC--CHH----HHHHHHHcCCceeEeeecccc
Q psy15542 93 IVASNDI--NEE----TILSLNEQGHRIDCFGIGTHL 123 (180)
Q Consensus 93 Iv~Sn~L--de~----~i~~L~~~g~~id~fGIGT~L 123 (180)
|+..+++ |+. .++.+++.|..+...|+|+.-
T Consensus 111 il~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~ 147 (192)
T 2x5n_A 111 AFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQ 147 (192)
T ss_dssp EEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC-
T ss_pred EEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCC
Confidence 4555666 344 345556788889999999864
No 119
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=25.58 E-value=81 Score=26.54 Aligned_cols=76 Identities=22% Similarity=0.354 Sum_probs=45.3
Q ss_pred HHHHHHHHHHCCCCeEEeeeeccccccCCCCCCceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCCCCC------
Q psy15542 57 LAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQP------ 130 (180)
Q Consensus 57 ~~Af~aya~~fP~~~i~LvDTYd~~~Ld~~g~~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~~~p------ 130 (180)
..||+.=.++.|+..+.+=| |++.. .+-.|. +.+ .+-++.|.++|.+||++|+=.|+......+
T Consensus 152 ~~af~~Ar~~dP~a~L~~Nd-yn~~~---~~~~k~-----~~~-~~~v~~l~~~G~~iDgIG~Q~H~~~~~~~~~~~~~~ 221 (313)
T 1v0l_A 152 EVAFRTARAADPSAKLCYND-YNVEN---WTWAKT-----QAM-YNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTT 221 (313)
T ss_dssp HHHHHHHHHHCTTSEEEEEE-SSCCS---TTSHHH-----HHH-HHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHH
T ss_pred HHHHHHHHhhCCCCEEEEec-ccccc---CChHHH-----HHH-HHHHHHHHHCCCCcceEEEeEEccCCCCCHHHHHHH
Confidence 47888878888976555544 43321 000111 000 345667888999999999988886533211
Q ss_pred -----cceeEEEEeEEc
Q psy15542 131 -----ALGCVYKLVEIN 142 (180)
Q Consensus 131 -----~Lg~VyKLVei~ 142 (180)
.+|.=.-+.|++
T Consensus 222 l~~~a~~G~pv~iTEld 238 (313)
T 1v0l_A 222 LQNFAALGVDVAITELD 238 (313)
T ss_dssp HHHHHTTTCEEEEEEEE
T ss_pred HHHHHhcCCeEEEEeCC
Confidence 346666677765
No 120
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=24.96 E-value=53 Score=28.57 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=31.8
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.|++.|+++.+.+.++.+.|. +|..++|..+...+
T Consensus 307 ~iPvi~~G~it~~~a~~~l~~g~-aD~V~igR~~l~~P 343 (379)
T 3aty_A 307 SGVKISNLRYDFEEADQQIREGK-VDAVAFGAKFIANP 343 (379)
T ss_dssp CSCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCcEEEECCCCHHHHHHHHHcCC-CeEEEecHHHHhCc
Confidence 46799999999999999998764 89999999998654
No 121
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=24.79 E-value=49 Score=28.44 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=28.2
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeecccccc
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
++.|+++||+ +.+.+.++...| .|+.+||+.+..
T Consensus 280 ~ipvia~GGI~~~~D~~k~l~~G--AdaV~iGr~~l~ 314 (370)
T 1gox_A 280 RIPVFLDGGVRRGTDVFKALALG--AAGVFIGRPVVF 314 (370)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHT--CSEEEECHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHcC--CCEEeecHHHHH
Confidence 6889999999 666888877777 689999998863
No 122
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=24.64 E-value=53 Score=28.77 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=31.5
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.|++.|+++.+.+.++.++|. +|..++|..+...+
T Consensus 319 ~iPvi~~G~i~~~~a~~~l~~g~-aD~V~igR~~l~dP 355 (402)
T 2hsa_B 319 QGTFICSGGYTRELGIEAVAQGD-ADLVSYGRLFISNP 355 (402)
T ss_dssp SSCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCCEEEeCCCCHHHHHHHHHCCC-CceeeecHHHHhCc
Confidence 35699999999999999998764 79999999987654
No 123
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=24.41 E-value=33 Score=28.52 Aligned_cols=34 Identities=18% Similarity=0.368 Sum_probs=27.5
Q ss_pred eeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 91 LQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 91 vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
+.+|+-+|++ .+.+..+.+ + +|+|-||+.|+...
T Consensus 203 ~~vIaEsGI~t~edv~~~~~--~-a~avLVG~aimr~~ 237 (251)
T 1i4n_A 203 TVVVAESGIKDPRELKDLRG--K-VNAVLVGTSIMKAE 237 (251)
T ss_dssp SEEEEESCCCCGGGHHHHTT--T-CSEEEECHHHHHCS
T ss_pred CEEEEeCCCCCHHHHHHHHH--h-CCEEEEcHHHcCCc
Confidence 4477778886 999999986 5 89999999998644
No 124
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=23.71 E-value=65 Score=26.79 Aligned_cols=37 Identities=16% Similarity=0.133 Sum_probs=29.7
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
+++|+++||+ +.+.+.++.+++ .+|...||+.+..++
T Consensus 183 ~ipVi~~GgI~s~~da~~~l~~~-gad~V~iGR~~l~~P 220 (318)
T 1vhn_A 183 RIPTFVSGDIFTPEDAKRALEES-GCDGLLVARGAIGRP 220 (318)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHH-CCSEEEESGGGTTCT
T ss_pred CCeEEEECCcCCHHHHHHHHHcC-CCCEEEECHHHHhCc
Confidence 6789999998 888888888742 279999999887543
No 125
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=23.52 E-value=58 Score=28.16 Aligned_cols=37 Identities=8% Similarity=0.068 Sum_probs=31.5
Q ss_pred ceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.|++.++++.+.+.++.++|. +|..++|..+...+
T Consensus 301 ~iPvi~~G~i~~~~a~~~l~~g~-aD~V~~gR~~l~~P 337 (376)
T 1icp_A 301 KGTFIVAGGYDREDGNRALIEDR-ADLVAYGRLFISNP 337 (376)
T ss_dssp CSCEEEESSCCHHHHHHHHHTTS-CSEEEESHHHHHCT
T ss_pred CCCEEEeCCCCHHHHHHHHHCCC-CcEEeecHHHHhCc
Confidence 35799999999999999998764 79999999987654
No 126
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=23.35 E-value=1.7e+02 Score=19.53 Aligned_cols=53 Identities=11% Similarity=0.084 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHCCCCeEEeeeecccc--ccCCCCCCce---------eEEEeCCCCHHHHHHHH
Q psy15542 56 ELAALISYAIAFPDGFMALVDTYDVK--RYNIPWFAEL---------QIVASNDINEETILSLN 108 (180)
Q Consensus 56 E~~Af~aya~~fP~~~i~LvDTYd~~--~Ld~~g~~~v---------kIv~Sn~Lde~~i~~L~ 108 (180)
..+.+++|.+.+.-++..+.|....+ .+++.+.+.+ .-...|.++++.+.++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 81 NQQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CHHHHHHHHHHTTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred CHHHHHHHHHHcCCceeEEEcCchhHHHhcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 57888899988876677777765444 4444444433 22356777888777654
No 127
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=23.33 E-value=66 Score=27.57 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=31.5
Q ss_pred ceeEEEeCCC-CHHHHHHHHHcCCceeEeeeccccccCCC
Q psy15542 90 ELQIVASNDI-NEETILSLNEQGHRIDCFGIGTHLVTCQR 128 (180)
Q Consensus 90 ~vkIv~Sn~L-de~~i~~L~~~g~~id~fGIGT~Lvt~~~ 128 (180)
++.|++.|++ +.+.+.++.+.|. +|..++|..+...++
T Consensus 277 ~iPVi~~Ggi~t~e~Ae~~l~~G~-aD~V~iGR~~lanPd 315 (343)
T 3kru_A 277 NIKTSAVGLITTQELAEEILSNER-ADLVALGRELLRNPY 315 (343)
T ss_dssp TCEEEEESSCCCHHHHHHHHHTTS-CSEEEESHHHHHCTT
T ss_pred CcccceeeeeeHHHHHHHHHhchh-hHHHHHHHHHhcCCe
Confidence 4689999998 5899999988764 799999999986553
No 128
>2rhf_A DNA helicase RECQ; HRDC, D. radiodurans, ATP-binding, hydrolase nucleotide-binding; HET: DNA; 1.10A {Deinococcus radiodurans}
Probab=23.21 E-value=58 Score=21.57 Aligned_cols=41 Identities=20% Similarity=0.040 Sum_probs=31.8
Q ss_pred chHHHHHHHHHHhhcCccccceeeecccHHHHHHHHHHHCCCC
Q psy15542 28 ADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDG 70 (180)
Q Consensus 28 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~E~~Af~aya~~fP~~ 70 (180)
..+++.-..||++++.-.+++.-..+.+ +++.+.|+..|.+
T Consensus 5 ~~l~~~L~~wR~~~A~~~~vpp~~I~~d--~~L~~iA~~~P~t 45 (77)
T 2rhf_A 5 ADLSEALRELRRELMKETGYSAFVVFTN--ATLEALAARQPRT 45 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHCCH--HHHHHHHHHCCCS
T ss_pred HHHHHHHHHHHHHHHHHcCCCcceeeCH--HHHHHHHHhCCCC
Confidence 4578888899999998888776666663 5677788889965
No 129
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=22.56 E-value=1.7e+02 Score=19.31 Aligned_cols=64 Identities=19% Similarity=0.353 Sum_probs=39.0
Q ss_pred ccceeeec-ccHHHHHHHHHHHCCCCeEEeeeecccc--ccCCCCCCceeE--------EEe---CCCCHHHHHHHHH
Q psy15542 46 DVLTDEAS-DGELAALISYAIAFPDGFMALVDTYDVK--RYNIPWFAELQI--------VAS---NDINEETILSLNE 109 (180)
Q Consensus 46 ~~~~~~~~-~~E~~Af~aya~~fP~~~i~LvDTYd~~--~Ld~~g~~~vkI--------v~S---n~Lde~~i~~L~~ 109 (180)
++.+.... +++.+.+++|++.++-++..+.|..... .+++.+.+.+-+ ... |..+.+.+.+..+
T Consensus 55 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~~~g~~~~~~l~~~l~ 132 (136)
T 1lu4_A 55 AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVA 132 (136)
T ss_dssp TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEEEECCSSSCCCHHHHHHHHH
T ss_pred CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEEEEECCCCcEEEEEcCCCccCHHHHHHHHH
Confidence 34444433 2337788888888887777777765433 455555544312 355 6678887777654
No 130
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=22.49 E-value=93 Score=25.98 Aligned_cols=60 Identities=20% Similarity=0.238 Sum_probs=37.5
Q ss_pred HHHHHHHHHHCCCCeEEeeeeccccccCCCCCCceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccC
Q psy15542 57 LAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTC 126 (180)
Q Consensus 57 ~~Af~aya~~fP~~~i~LvDTYd~~~Ld~~g~~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~ 126 (180)
..||+.=.++.|+..+.+=| |+.. .++..+. +-=.+-++.|.++|.+||++|+=.|+...
T Consensus 153 ~~af~~Ar~~dP~a~L~~Nd-yn~~---~~~~~k~------~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~ 212 (303)
T 1ta3_B 153 RIAFETARAADPDAKLYIND-YNLD---SASYAKT------QAMASYVKKWLAEGVPIDGIGSQAHYSSS 212 (303)
T ss_dssp HHHHHHHHHHCTTSEEEEEE-SCCC---CTTSHHH------HHHHHHHHHHHHTTCCCCEEEECCEECTT
T ss_pred HHHHHHHHHHCCCCEEEecc-cccc---CCchHHH------HHHHHHHHHHHHCCCCcceEEEeeecCCC
Confidence 57888888888987666656 4321 1111111 00134566678899999999998888654
No 131
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}
Probab=22.47 E-value=60 Score=27.45 Aligned_cols=36 Identities=22% Similarity=0.229 Sum_probs=25.5
Q ss_pred CCceeEEEeCCCCHHHHHHHHH---cCCcee-Eeeeccccc
Q psy15542 88 FAELQIVASNDINEETILSLNE---QGHRID-CFGIGTHLV 124 (180)
Q Consensus 88 ~~~vkIv~Sn~Lde~~i~~L~~---~g~~id-~fGIGT~Lv 124 (180)
+..+ |+++||++.+..+++.+ .-.|+. ++|+|+.=+
T Consensus 54 ~D~~-ia~tngi~~~~h~~i~~~i~~~~Pv~vs~~~g~~~t 93 (268)
T 2qv6_A 54 FDNL-IAITNGIDLITHKRIQESIRNRYPFTVSMVIASAET 93 (268)
T ss_dssp SSEE-EEECTTCCHHHHHHHHHHHHHHSSSCEEEEEEEESS
T ss_pred cceE-EEEeCCCCHHHHHHHHHHHhhcCCceEEEEEEecCC
Confidence 3455 99999999999988865 234544 677776544
No 132
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A
Probab=22.38 E-value=94 Score=26.67 Aligned_cols=74 Identities=24% Similarity=0.260 Sum_probs=45.2
Q ss_pred HHHHHHHHHHCCCCeEEeeeeccccccCCCCCCceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCCCCC------
Q psy15542 57 LAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQP------ 130 (180)
Q Consensus 57 ~~Af~aya~~fP~~~i~LvDTYd~~~Ld~~g~~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~~~p------ 130 (180)
..||+.=.++.|+..+++=| |+++. .+ .|. +.+ .+.++.|.++|.+||+.|+=.|+... ..|
T Consensus 173 ~~af~~Ar~~dP~a~L~~ND-yn~e~---~~-~k~-----~~~-~~lv~~l~~~GvpIdgIG~Q~H~~~~-~~~~~~~~~ 240 (341)
T 3niy_A 173 EKAFRWTKEADPDAILIYND-YSIEE---IN-AKS-----NFV-YNMIKELKEKGVPVDGIGFQMHIDYR-GLNYDSFRR 240 (341)
T ss_dssp HHHHHHHHHHCTTSEEEEEE-SSCSS---SS-HHH-----HHH-HHHHHHHHHTTCCCCEEEECCEEETT-CCCHHHHHH
T ss_pred HHHHHHHHHHCCCceEEeec-ccccc---Cc-hHH-----HHH-HHHHHHHHHCCCCcceEeeeeecCCC-CCCHHHHHH
Confidence 46777666777765444433 43321 11 111 000 34677788899999999999999653 222
Q ss_pred ------cceeEEEEeEEc
Q psy15542 131 ------ALGCVYKLVEIN 142 (180)
Q Consensus 131 ------~Lg~VyKLVei~ 142 (180)
.+|.=.-+.|++
T Consensus 241 ~l~~~a~lGl~v~iTElD 258 (341)
T 3niy_A 241 NLERFAKLGLQIYITEMD 258 (341)
T ss_dssp HHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHcCCeEEEEecc
Confidence 467777788876
No 133
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=22.37 E-value=97 Score=26.89 Aligned_cols=76 Identities=21% Similarity=0.354 Sum_probs=44.6
Q ss_pred HHHHHHHHHHCCCCeEEeeeeccccccCCCCCCceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCCCCC------
Q psy15542 57 LAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQP------ 130 (180)
Q Consensus 57 ~~Af~aya~~fP~~~i~LvDTYd~~~Ld~~g~~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~~~p------ 130 (180)
..||+.=.++.|+..+.+=| |++.. .+-.|. +.+ .+-++.|.++|.+||++|+=.|+......+
T Consensus 152 ~~af~~Ar~~dP~a~l~~Nd-yn~~~---~~~~k~-----~~~-~~~v~~l~~~g~~iDgiG~q~H~~~~~~~~~~~~~~ 221 (436)
T 2d1z_A 152 EVAFRTARAADPAAKLCYND-YNIEN---WTWAKT-----QGV-YNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTT 221 (436)
T ss_dssp HHHHHHHHHHCTTSEEEEEE-SSCCS---TTSHHH-----HHH-HHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHH
T ss_pred HHHHHHHHhhCCCCEEEEec-ccccc---CChhHH-----HHH-HHHHHHHHhCCCcccEEEEeeEEcCCCCCHHHHHHH
Confidence 57888777888876655544 43321 000111 000 234777888999999999988876432211
Q ss_pred -----cceeEEEEeEEc
Q psy15542 131 -----ALGCVYKLVEIN 142 (180)
Q Consensus 131 -----~Lg~VyKLVei~ 142 (180)
.+|.=.-+.|++
T Consensus 222 l~~~a~~g~~v~iTEld 238 (436)
T 2d1z_A 222 LQNFAALGVDVAITELD 238 (436)
T ss_dssp HHHHHTTTCEEEEEEEE
T ss_pred HHHHHHcCCeEEEeecc
Confidence 345555666765
No 134
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=22.00 E-value=1e+02 Score=25.57 Aligned_cols=34 Identities=15% Similarity=0.183 Sum_probs=23.4
Q ss_pred CCceeEEEeCCCC------HHHHHHHHHcCCceeEeeecc
Q psy15542 88 FAELQIVASNDIN------EETILSLNEQGHRIDCFGIGT 121 (180)
Q Consensus 88 ~~~vkIv~Sn~Ld------e~~i~~L~~~g~~id~fGIGT 121 (180)
..++-|++|||-| .+..+.+.++|..|...|||.
T Consensus 9 ~~k~iillTDG~~~~g~~p~~aa~~a~~~gi~v~tIGig~ 48 (242)
T 3rag_A 9 TIRQILVITDGCSNIGPDPVEAARRAHRHGIVVNVIGIVG 48 (242)
T ss_dssp CEEEEEEEESSCCCSSSCHHHHHHHHHHTTCEEEEEEECC
T ss_pred CccEEEEEccCCCCCCCCHHHHHHHHHHCCCEEEEEEecC
Confidence 3455588888874 444455566888888999963
No 135
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=21.88 E-value=70 Score=26.85 Aligned_cols=35 Identities=17% Similarity=0.382 Sum_probs=28.6
Q ss_pred CceeEEEeCCCC-HHHHHHHHHcCCceeEeeecccccc
Q psy15542 89 AELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 89 ~~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
.++.|+++||+. .+.+.+....| .|+.+||+.+..
T Consensus 250 ~~ipvia~GGI~~~~d~~k~l~~G--Ad~V~iG~~~l~ 285 (349)
T 1p0k_A 250 PASTMIASGGLQDALDVAKAIALG--ASCTGMAGHFLK 285 (349)
T ss_dssp TTSEEEEESSCCSHHHHHHHHHTT--CSEEEECHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHHcC--CCEEEEcHHHHH
Confidence 468899999986 77787776666 699999998874
No 136
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=21.49 E-value=1.8e+02 Score=19.11 Aligned_cols=59 Identities=12% Similarity=0.107 Sum_probs=34.7
Q ss_pred ecccHHHHHHHHHHHCCCCeEEeeeecccc--------ccCCC-CCCceeEEEeCCCCHHHHHHHHHcCC
Q psy15542 52 ASDGELAALISYAIAFPDGFMALVDTYDVK--------RYNIP-WFAELQIVASNDINEETILSLNEQGH 112 (180)
Q Consensus 52 ~~~~E~~Af~aya~~fP~~~i~LvDTYd~~--------~Ld~~-g~~~vkIv~Sn~Lde~~i~~L~~~g~ 112 (180)
...+-.+|+....+.-|+ ++|+|..-.. .+... ......|+++.+.+.+.+.+..+.|+
T Consensus 35 ~~~~~~~a~~~l~~~~~d--lii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~ 102 (132)
T 3lte_A 35 IAHNGFDAGIKLSTFEPA--IMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGA 102 (132)
T ss_dssp EESSHHHHHHHHHHTCCS--EEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTC
T ss_pred EeCCHHHHHHHHHhcCCC--EEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhCh
Confidence 455556777766655554 6777876322 33322 23455677777766667766666554
No 137
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=21.23 E-value=1.4e+02 Score=19.82 Aligned_cols=75 Identities=13% Similarity=0.019 Sum_probs=38.9
Q ss_pred HHHHHHHHHhhcCccccceeeecccHHHHHHHHHHHCCCCeEEeeeecccc--------ccCC-CCCCceeEEEeCCCCH
Q psy15542 31 LALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMALVDTYDVK--------RYNI-PWFAELQIVASNDINE 101 (180)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~Af~aya~~fP~~~i~LvDTYd~~--------~Ld~-~g~~~vkIv~Sn~Lde 101 (180)
.+....++.+. |........+-.+|+....+.-|+ ++++|..-.. .+.. .+-..+ |++|+.-+.
T Consensus 14 ~~~l~~~L~~~----g~~v~~~~~~~~~a~~~~~~~~~d--lii~d~~l~~~~g~~~~~~l~~~~~~~~i-i~~s~~~~~ 86 (134)
T 3f6c_A 14 IAAIRNLLIKN----DIEILAELTEGGSAVQRVETLKPD--IVIIDVDIPGVNGIQVLETLRKRQYSGII-IIVSAKNDH 86 (134)
T ss_dssp HHHHHHHHHHT----TEEEEEEESSSTTHHHHHHHHCCS--EEEEETTCSSSCHHHHHHHHHHTTCCSEE-EEEECC---
T ss_pred HHHHHHHHhhC----CcEEEEEcCCHHHHHHHHHhcCCC--EEEEecCCCCCChHHHHHHHHhcCCCCeE-EEEeCCCCh
Confidence 33334444443 444443444446677777766665 5777865222 2221 222234 788888888
Q ss_pred HHHHHHHHcCC
Q psy15542 102 ETILSLNEQGH 112 (180)
Q Consensus 102 ~~i~~L~~~g~ 112 (180)
+.+.+..+.|+
T Consensus 87 ~~~~~~~~~g~ 97 (134)
T 3f6c_A 87 FYGKHCADAGA 97 (134)
T ss_dssp CTHHHHHHTTC
T ss_pred HHHHHHHHhCC
Confidence 77777777653
No 138
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=21.21 E-value=1e+02 Score=26.32 Aligned_cols=75 Identities=17% Similarity=0.140 Sum_probs=45.7
Q ss_pred HHHHHHHHHHCCCCeEEeeeeccccccCCCCCCceeEEEeCCCCHHHHHHHHHcCCceeEeeeccccccCCCCC------
Q psy15542 57 LAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQP------ 130 (180)
Q Consensus 57 ~~Af~aya~~fP~~~i~LvDTYd~~~Ld~~g~~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt~~~~p------ 130 (180)
..||+.=.++.|+..+.+=| |++.. .+ .|. +. =.+-++.|.++|.+||++|+=.|+......+
T Consensus 162 ~~aF~~Ar~adP~a~L~~ND-yn~~~---~~-~k~-----~~-~~~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~ 230 (348)
T 1w32_A 162 DEAFRRARAADPTAELYYND-FNTEE---NG-AKT-----TA-LVNLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQA 230 (348)
T ss_dssp HHHHHHHHHHCTTSEEEEEE-SSTTS---CS-HHH-----HH-HHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEecc-ccccc---CC-chH-----HH-HHHHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHH
Confidence 56777777778876555444 33311 00 010 00 0233567778999999999988986533222
Q ss_pred -------cceeEEEEeEEc
Q psy15542 131 -------ALGCVYKLVEIN 142 (180)
Q Consensus 131 -------~Lg~VyKLVei~ 142 (180)
.+|.=..+.|.+
T Consensus 231 l~~~a~~~~Gl~i~ITElD 249 (348)
T 1w32_A 231 MQKIVALSPTLKIKITELD 249 (348)
T ss_dssp HHHHHTTCSSCEEEEEEEE
T ss_pred HHHHhcccCCCeEEEEeCc
Confidence 678888888876
No 139
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=20.74 E-value=72 Score=26.01 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=30.1
Q ss_pred ceeEEEeCCCC-HHHHHHHHHcCCceeEeeeccccccCC
Q psy15542 90 ELQIVASNDIN-EETILSLNEQGHRIDCFGIGTHLVTCQ 127 (180)
Q Consensus 90 ~vkIv~Sn~Ld-e~~i~~L~~~g~~id~fGIGT~Lvt~~ 127 (180)
++.|++-+|+. .+.+.++.+.| .|++-|||.++...
T Consensus 178 ~iPviv~gGI~t~eda~~~~~~G--AdgViVGSAi~~a~ 214 (264)
T 1xm3_A 178 KVPVIVDAGIGSPKDAAYAMELG--ADGVLLNTAVSGAD 214 (264)
T ss_dssp SSCBEEESCCCSHHHHHHHHHTT--CSEEEESHHHHTSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHcC--CCEEEEcHHHhCCC
Confidence 56789999995 89999998866 58999999998643
No 140
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=20.44 E-value=97 Score=25.73 Aligned_cols=59 Identities=20% Similarity=0.255 Sum_probs=36.7
Q ss_pred HHHHHHHHHHCCCCeEEeeeeccccccCCCCCCceeEEEeCCCCHHHHHHHHHcCCceeEeeecccccc
Q psy15542 57 LAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVT 125 (180)
Q Consensus 57 ~~Af~aya~~fP~~~i~LvDTYd~~~Ld~~g~~~vkIv~Sn~Lde~~i~~L~~~g~~id~fGIGT~Lvt 125 (180)
..||+.-.++.|+..+.+=| |+.. .++..+. +--.+.+..|.++|.+||++|+=+|+..
T Consensus 154 ~~af~~Ar~~dP~a~L~~Nd-yn~~---~~~~~k~------~~~~~~v~~l~~~G~~iDgiG~Q~H~~~ 212 (303)
T 1i1w_A 154 PIAFQTARAADPNAKLYIND-YNLD---SASYPKT------QAIVNRVKKWRAAGVPIDGIGSQTHLSA 212 (303)
T ss_dssp HHHHHHHHHHCTTSEEEEEE-SSCC---CSSSHHH------HHHHHHHHHHHHTTCCCCEEEECCEECT
T ss_pred HHHHHHHHHHCCCCeEEecc-cccc---CCChHHH------HHHHHHHHHHHHCCCcccEEEeccccCC
Confidence 57888878888976655444 3321 1111111 0113456778889999999999888754
No 141
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=20.37 E-value=2.2e+02 Score=19.61 Aligned_cols=55 Identities=16% Similarity=0.101 Sum_probs=36.8
Q ss_pred cHHHHHHHHHHHCCCCeEEeeeeccc------c--ccCCCCCCce---------eEEEeCCCCHHHHHHHHH
Q psy15542 55 GELAALISYAIAFPDGFMALVDTYDV------K--RYNIPWFAEL---------QIVASNDINEETILSLNE 109 (180)
Q Consensus 55 ~E~~Af~aya~~fP~~~i~LvDTYd~------~--~Ld~~g~~~v---------kIv~Sn~Lde~~i~~L~~ 109 (180)
+..+.+++|++.+.-.+..+.|.... . .+++.+.+.+ .-...|.++.+.+.+..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 151 (160)
T 3lor_A 80 MTPEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLG 151 (160)
T ss_dssp SCHHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHH
Confidence 45888999999998777788887765 2 4555544433 223447788887776654
Done!