RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15549
(621 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 90.6 bits (223), Expect = 2e-20
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 19/138 (13%)
Query: 125 LSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIV 184
+ H+ +N + F PNG A+G D++T ++ + ++
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDL-------------------RADQELM 262
Query: 185 TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244
T + + +S+S + L++G D +WD K G+L H V +
Sbjct: 263 TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD 322
Query: 245 KNQYVATLSSDRSLRTYS 262
VAT S D L+ ++
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
Score = 74.0 bits (180), Expect = 7e-15
Identities = 47/266 (17%), Positives = 87/266 (32%), Gaps = 51/266 (19%)
Query: 77 LSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVR 136
L H + + + + LL S GK I + + + + + V
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA------IPLRSSWVMTCA 104
Query: 137 FSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNK----------------- 179
++P+G +A G ++ ++ KT +
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT 164
Query: 180 -------EHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE 232
E T GH DV +S +P + +SG+ D +A +WDV +G T
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 233 HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPL 292
H+ + + + P AT S D + R + D+ +
Sbjct: 225 HESDINAICFFPNGNAFATGSDDATCRLF---------------------DLRADQELMT 263
Query: 293 FHDDTMKSFFRRLTFSPDGQLLIAPS 318
+ D + ++FS G+LL+A
Sbjct: 264 YSHDNIICGITSVSFSKSGRLLLAGY 289
Score = 65.9 bits (159), Expect = 3e-12
Identities = 51/284 (17%), Positives = 93/284 (32%), Gaps = 12/284 (4%)
Query: 157 KQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTA 216
K D L + ++N+D + + LRGHL +Y + W S L+S S D
Sbjct: 23 KACADATLSQI-TNNIDPVGRIQMR--TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKL 79
Query: 217 IMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSK 276
I+WD + + + +V A+ P YVA D Y++++++ R R
Sbjct: 80 IIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL 139
Query: 277 LPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHV 336
+ + L GQ + +
Sbjct: 140 AGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQ-------QTTTFTGHTGDVMSLSL 192
Query: 337 FTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNI--L 394
L C S + + V C F SD + P A +++ L
Sbjct: 193 APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRL 252
Query: 395 LYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSI 438
+ + +T +++S G++L+A D C++
Sbjct: 253 FDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296
Score = 60.5 bits (145), Expect = 2e-10
Identities = 27/199 (13%), Positives = 58/199 (29%), Gaps = 48/199 (24%)
Query: 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187
H V + +P+ L SG +++ +W + +
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM---------------------CRQT 221
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF--VQGVAWDPK 245
GH D+ I + P +GS D T ++D+ + L + + V++
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281
Query: 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRL 305
+ + D + + V HD+ + L
Sbjct: 282 GRLLLAGYDDFNCNVWDALKADRAG-------------------VLAGHDNRVSC----L 318
Query: 306 TFSPDGQLLIAPSGCLENS 324
+ DG + +G ++
Sbjct: 319 GVTDDGMAVA--TGSWDSF 335
Score = 35.5 bits (80), Expect = 0.015
Identities = 14/108 (12%), Positives = 33/108 (30%), Gaps = 27/108 (25%)
Query: 1 MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWY 60
+ + + + SV + ++ G D + +W
Sbjct: 258 DQELMTYSHDNIICGITSVSFS-----KSGRLLLAGYDDFNC--------------NVWD 298
Query: 61 LTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGK-EIW 107
+ + A L+ H V+ + + +G +A+G +IW
Sbjct: 299 ALKAD-------RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 28.9 bits (63), Expect = 1.7
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 411 HYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNE 445
H K+ + W +D ++L+++S DG I
Sbjct: 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN 88
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 89.8 bits (221), Expect = 3e-20
Identities = 58/335 (17%), Positives = 120/335 (35%), Gaps = 53/335 (15%)
Query: 125 LSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN------------- 171
LS H+ V V F P ++ S +++TI VW +T
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 72
Query: 172 --------LDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK 223
+ + + + + + + GH +V +S P H++S S D T MW+V
Sbjct: 73 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 132
Query: 224 GKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSH 283
G + T H+++V+ V + +A+ S+D+++R + + +K+ + H
Sbjct: 133 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL--------REH 184
Query: 284 ELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLN 343
+ + + + S + G S S K I + V T CL
Sbjct: 185 RHVVECISWAPESSYSSI---SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 241
Query: 344 KPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASP 403
+L + V+ LF + +++ A + + ++D ++
Sbjct: 242 -------TLVGHDNWVRGV-------------LFHSGGKFILSCADDKTLRVWDYKNKRC 281
Query: 404 FAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSI 438
+ N H +T + + ++ S D +
Sbjct: 282 MKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 315
Score = 86.7 bits (213), Expect = 3e-19
Identities = 38/202 (18%), Positives = 80/202 (39%), Gaps = 11/202 (5%)
Query: 62 TERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEF 121
T + + + H++ V +VR + +G L+AS + T R +A E
Sbjct: 124 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ------TVRVWVVATKEC 177
Query: 122 ASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENV--NK 179
++L H+ V + ++P + + + + + P S + D+ +
Sbjct: 178 KAELREHRHVVECISWAPESSYSSISEATGSETKK---SGKPGPFLLSGSRDKTIKMWDV 234
Query: 180 EHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQG 239
+ L GH V + + ++S + D T +WD + + L H+ FV
Sbjct: 235 STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 294
Query: 240 VAWDPKNQYVATLSSDRSLRTY 261
+ + YV T S D++++ +
Sbjct: 295 LDFHKTAPYVVTGSVDQTVKVW 316
Score = 80.2 bits (196), Expect = 5e-17
Identities = 46/236 (19%), Positives = 88/236 (37%), Gaps = 32/236 (13%)
Query: 89 FSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGD 148
PNG+ + S + + + + H++ V +VR + +G L+AS
Sbjct: 109 IMPNGDHIVSASRDKTIKMWEVQTGYCVKT------FTGHREWVRMVRPNQDGTLIASCS 162
Query: 149 DESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI 208
++ T+ VW T + E E ++ + S P L+
Sbjct: 163 NDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKP-GPFLL 221
Query: 209 SGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKV 268
SGS D T MWDV G L L H +V+GV + +++ + + D++LR + ++K+
Sbjct: 222 SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 281
Query: 269 ISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENS 324
+ + V S L F ++ +G ++ +
Sbjct: 282 MKTLNAHEHFVTS-----------------------LDFHKTAPYVV--TGSVDQT 312
Score = 72.9 bits (177), Expect = 2e-14
Identities = 47/278 (16%), Positives = 99/278 (35%), Gaps = 28/278 (10%)
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247
L GH V + + P + ++S S D T +WD G L H VQ +++D +
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 72
Query: 248 YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHEL----------FDKVVPLFHDDT 297
+A+ S+D +++ + Q + I V S + DK + ++ T
Sbjct: 73 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 132
Query: 298 MK---------SFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVC 348
+ R + + DG L+ S S + + V V T+ C +
Sbjct: 133 GYCVKTFTGHREWVRMVRPNQDGTLIA--------SCSNDQTVRVWVVATKECKAELREH 184
Query: 349 LPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIA 408
++ S A + + P +++ + + I ++D +
Sbjct: 185 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 244
Query: 409 NIHYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEI 446
H + + + S GK +++ + D + + +
Sbjct: 245 G-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 281
Score = 70.2 bits (170), Expect = 1e-13
Identities = 34/196 (17%), Positives = 60/196 (30%), Gaps = 36/196 (18%)
Query: 29 NCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSR----HQKAV 84
+ I + D V ++ L E + + +A + S
Sbjct: 154 DGTLIASCSNDQTV-----RVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGS 208
Query: 85 NVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL 144
+ G L SG + + L H V V F G+ +
Sbjct: 209 ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT------LVGHDNWVRGVLFHSGGKFI 262
Query: 145 ASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTS 204
S D+ T+ VW K + + K L H V + + T+
Sbjct: 263 LSCADDKTLRVWDYKNKRCM---------------------KTLNAHEHFVTSLDFHKTA 301
Query: 205 THLISGSVDNTAIMWD 220
++++GSVD T +W+
Sbjct: 302 PYVVTGSVDQTVKVWE 317
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 86.4 bits (212), Expect = 9e-19
Identities = 35/183 (19%), Positives = 68/183 (37%), Gaps = 16/183 (8%)
Query: 89 FSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG 147
+G+ +A+G +W + H+ +V V F+ +G+ + SG
Sbjct: 213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272
Query: 148 DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL 207
+ ++ +W + + + + N GH + V ++ + ++
Sbjct: 273 SLDRSVKLWNLQNANNKSDSKTPN---------SGTCEVTYIGHKDFVLSVATTQNDEYI 323
Query: 208 ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVA------WDPKNQYVATLSSDRSLRTY 261
+SGS D + WD G L +L H+ V VA P+ AT S D R +
Sbjct: 324 LSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 383
Query: 262 SIQ 264
+
Sbjct: 384 KYK 386
Score = 75.6 bits (184), Expect = 3e-15
Identities = 58/395 (14%), Positives = 127/395 (32%), Gaps = 54/395 (13%)
Query: 77 LSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLT--ERESGIANVEFASDLSRHQKAVNV 134
+ H K + + + + +Y+ +VE L H V
Sbjct: 9 RANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLD-HTSVVCC 67
Query: 135 VRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLED 194
V+FS +GE LA+G ++ T V++ + D + T
Sbjct: 68 VKFSNDGEYLATGCNK-TTQVYRVSDGSLVARLSD---DSAANKDPENLNTSSSPSSDLY 123
Query: 195 VYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS 254
+ + +SP L +G+ D +WD+ K + IL H++ + + + P + + S
Sbjct: 124 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 183
Query: 255 DRSLRTYSIQSKKVISRACRSKLPVDSSHEL----------FDKVVPLFHDDTMKSFF-- 302
DR++R + +++ + + D+ V ++ +T
Sbjct: 184 DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL 243
Query: 303 --------------RRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVC 348
+ F+ DGQ +++ S D + K ++ + ++ P
Sbjct: 244 DSENESGTGHKDSVYSVVFTRDGQSVVSGS-----LDRSVKLWNLQNANNKSDSKTPNSG 298
Query: 349 LPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIA 408
+ Y V +D +++ + + +L +D + +P +
Sbjct: 299 TCEVTYIGHKDFVLSVAT---TQND--------EYILSGSKDRGVLFWDKKSGNPLLMLQ 347
Query: 409 N-----IHYTKLTDITWSSDGKVLIASSTDGYCSI 438
I + + V S D I
Sbjct: 348 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARI 382
Score = 75.6 bits (184), Expect = 3e-15
Identities = 34/207 (16%), Positives = 62/207 (29%), Gaps = 47/207 (22%)
Query: 29 NCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88
+ I G D V ++W + H+ +V V
Sbjct: 216 DGKYIAAGSLDRAV--------------RVWDSETGFLVERLDSENESGTGHKDSVYSVV 261
Query: 89 FSPNGELLASGDDVGKEIWYLTERESGIA------NVEFASDLSRHQKAVNVVRFSPNGE 142
F+ +G+ + SG + + + + + H+ V V + N E
Sbjct: 262 FTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE 321
Query: 143 LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI---- 198
+ SG + ++ W +K+ L +L+GH V +
Sbjct: 322 YILSGSKDRGVLFWDKKSGNPL---------------------LMLQGHRNSVISVAVAN 360
Query: 199 --SWSPTSTHLISGSVDNTAIMWDVHK 223
S P +GS D A +W K
Sbjct: 361 GSSLGPEYNVFATGSGDCKARIWKYKK 387
Score = 60.6 bits (145), Expect = 2e-10
Identities = 34/302 (11%), Positives = 98/302 (32%), Gaps = 31/302 (10%)
Query: 195 VYDISWSPTST-HLISGSVDNTAIMWDVHKGKNLGI----LTEHKKFVQGVAWDPKNQYV 249
+ + S + ++ I+++ + + + +H V V + +Y+
Sbjct: 18 PFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYL 77
Query: 250 ATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309
AT +++ + Y + +++R L DS+ + + + + R + FSP
Sbjct: 78 AT-GCNKTTQVYRVSDGSLVAR-----LSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP 131
Query: 310 DGQLLIAPSGC-------------LENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYS 356
DG+ L + + + I F +++ +
Sbjct: 132 DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD 191
Query: 357 VAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENN-ILLYDTQHASPFAFIANI----- 410
+ C + ++ IA + + + ++D++ + +
Sbjct: 192 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT 251
Query: 411 -HYTKLTDITWSSDGKVLIASSTDGYCSIISFGDNEIGIPYVPPSGEESKENDPTKGEPV 469
H + + ++ DG+ +++ S D + + + P+ + + V
Sbjct: 252 GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV 311
Query: 470 RS 471
S
Sbjct: 312 LS 313
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 69.5 bits (168), Expect = 2e-13
Identities = 32/313 (10%), Positives = 65/313 (20%), Gaps = 32/313 (10%)
Query: 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187
H + V V S + +G + VW D + + +
Sbjct: 50 HGEVVCAVTISNPTRHVYTGGK-GCVKVW----------------DISHPGNKSPVSQLD 92
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247
+ P LI G +T +WD+ A
Sbjct: 93 CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD 152
Query: 248 YVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307
+ A + D + T
Sbjct: 153 S-----------KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG 201
Query: 308 SPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFE 367
D + + + AV + S + V
Sbjct: 202 GLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261
Query: 368 LKPSDDKP--LFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK 425
F + ++ +N + + T + + + + S D K
Sbjct: 262 HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK--ESSSVLSCDISVDDK 319
Query: 426 VLIASSTDGYCSI 438
++ S D ++
Sbjct: 320 YIVTGSGDKKATV 332
Score = 65.6 bits (158), Expect = 3e-12
Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 1/83 (1%)
Query: 181 HWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240
+ L H V + ++ +S DN W G ++ ++ V
Sbjct: 254 NKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSC 312
Query: 241 AWDPKNQYVATLSSDRSLRTYSI 263
++Y+ T S D+ Y +
Sbjct: 313 DISVDDKYIVTGSGDKKATVYEV 335
Score = 64.4 bits (155), Expect = 9e-12
Identities = 21/142 (14%), Positives = 43/142 (30%), Gaps = 29/142 (20%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 139
+ + + P GE LA G + N L H+ V ++F+
Sbjct: 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVL-------HVNKPDKYQLHLHESCVLSLKFAY 275
Query: 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDIS 199
G+ S ++ + W+ + + V
Sbjct: 276 CGKWFVSTGKDNLLNAWRTPYGASIFQS----------------------KESSSVLSCD 313
Query: 200 WSPTSTHLISGSVDNTAIMWDV 221
S ++++GS D A +++V
Sbjct: 314 ISVDDKYIVTGSGDKKATVYEV 335
Score = 57.5 bits (137), Expect = 2e-09
Identities = 35/280 (12%), Positives = 80/280 (28%), Gaps = 43/280 (15%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 139
H + V V S + +G ++W ++ + + D + + P
Sbjct: 50 HGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQL--DCLNRDNYIRSCKLLP 107
Query: 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEE-----------------------N 176
+G L G + ST+ +W + ++
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167
Query: 177 VNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF 236
+ + + + +GH + I S T L +G +DNT + + +
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT-VRSWDLREGRQLQQHDFTSQ 226
Query: 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSK----LPVDSSHELF-----D 287
+ + + P +++A ++ + L + F D
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD 286
Query: 288 KVVPLFHDDTMKSFF--------RRLTFSPDGQLLIAPSG 319
++ + S F S D + ++ SG
Sbjct: 287 NLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSG 326
Score = 54.4 bits (129), Expect = 2e-08
Identities = 24/261 (9%), Positives = 64/261 (24%), Gaps = 16/261 (6%)
Query: 190 GHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE-----HKKFVQGVAWDP 244
H E V ++ S + H+ +G +WD+ N +++ +++ P
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304
+ + S + + + + L
Sbjct: 108 DGCTLIV-GGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166
Query: 305 LTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPV 364
+ + L+ G + + T ++T N
Sbjct: 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQ 226
Query: 365 LFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDG 424
+F L + P + ++H + + + ++ G
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNV---------EVLHVNKPDKYQLHLHESCVLSLKFAYCG 277
Query: 425 KVLIASSTDGYCSIISFGDNE 445
K +++ D +
Sbjct: 278 KWFVSTGKDNLLNAWRTPYGA 298
Score = 39.0 bits (89), Expect = 0.001
Identities = 16/113 (14%), Positives = 29/113 (25%), Gaps = 20/113 (17%)
Query: 208 ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKK 267
+ D + + L H + V V ++V T ++ + I
Sbjct: 26 VPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYT-GGKGCVKVWDISHPG 83
Query: 268 VISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320
S + D+ ++S PDG LI
Sbjct: 84 NKSPVSQLDCLN--------------RDNYIRS----CKLLPDGCTLIVGGEA 118
Score = 32.5 bits (72), Expect = 0.12
Identities = 10/80 (12%), Positives = 21/80 (26%), Gaps = 23/80 (28%)
Query: 29 NCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88
V+ G D+ + W S S+ +V
Sbjct: 276 CGKWFVSTGKDNLL--------------NAWRTPYGASIF--------QSKESSSVLSCD 313
Query: 89 FSPNGELLASGDDVGK-EIW 107
S + + + +G K ++
Sbjct: 314 ISVDDKYIVTGSGDKKATVY 333
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 69.9 bits (169), Expect = 2e-13
Identities = 41/274 (14%), Positives = 81/274 (29%), Gaps = 14/274 (5%)
Query: 12 NRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANV 71
+ ++ ++ +R+V + + + V
Sbjct: 118 KKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTV 177
Query: 72 EFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKA 131
+ V S G L+A+G + G + N E + + +
Sbjct: 178 ---ESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS 233
Query: 132 VNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGH 191
+ V+FSP G LLA D ++ + + +V + H
Sbjct: 234 IRSVKFSPQGSLLAIAHDSNSFGCITLYETE-----FGERIGSLSVPTHSSQASLGEFAH 288
Query: 192 LEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251
V +S++ + L S D WDV + + L H ++ +A
Sbjct: 289 SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDI-----LAV 343
Query: 252 LSSDRSLRTYSIQSKKVISRACRSKLPVDSSHEL 285
SL + K + + RS + D + L
Sbjct: 344 DEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESL 377
Score = 57.2 bits (136), Expect = 2e-09
Identities = 26/174 (14%), Positives = 48/174 (27%), Gaps = 17/174 (9%)
Query: 187 ILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT------------EHK 234
+ H D++ +S + +S S D +WD N H
Sbjct: 9 AGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV 66
Query: 235 KFVQGVAWD-PKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKV--VP 291
+Q + D + VAT S L Y I + + KL + S +
Sbjct: 67 DVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALK 126
Query: 292 LFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKP 345
+ R + G I + ++ + + + P
Sbjct: 127 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESP 180
Score = 53.7 bits (127), Expect = 4e-08
Identities = 25/209 (11%), Positives = 57/209 (27%), Gaps = 42/209 (20%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVE----FASDLSRHQKAV--N 133
H + V + + SGD K +W ++ + F H V
Sbjct: 13 HDADIFSVSACNSFTVSCSGDGYLK-VWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQA 71
Query: 134 VVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLE 193
+ R + L+A+ ++ ++ + DE +
Sbjct: 72 IERDAFELCLVATTSFSGDLLFYRITRE-----------DETKKVIFEKLDLLDSDMKKH 120
Query: 194 DVYDISWSPTSTH-----LISGSVDNTAIMWDVHKGK------------------NLGIL 230
+ + W ++ L++ V T +W H +
Sbjct: 121 SFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESP 180
Query: 231 TEHKKFVQGVAWDPKNQYVATLSSDRSLR 259
+F V +AT ++ +++
Sbjct: 181 MTPSQFATSVDISE-RGLIATGFNNGTVQ 208
Score = 47.9 bits (112), Expect = 2e-06
Identities = 34/301 (11%), Positives = 81/301 (26%), Gaps = 71/301 (23%)
Query: 54 KTGKIWYLTERE---SGIANVEFASDLSRHQKAVNVVRFSPNGE------LLASGDDVGK 104
+ +T + I D + + +++ + + L+A+
Sbjct: 89 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTT 148
Query: 105 EIWYLTERESGIANVEF-----------ASDLSRHQKAVNVVRFSPNGELLASGDDESTI 153
IW ++ + V S G L+A+G + T+
Sbjct: 149 YIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTV 207
Query: 154 IVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVD 213
+ + T + ++ + + + + +SP + L
Sbjct: 208 QISELSTLR---------------PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS 252
Query: 214 NTAIMW----------------DVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRS 257
N+ H + H +V ++++ + + + D
Sbjct: 253 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK 312
Query: 258 LRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAP 317
LR + +++K+ I L H D ++ L G L P
Sbjct: 313 LRFWDVKTKERI-------------TTLNM------HCDDIEIEEDILAVDEHGDSLAEP 353
Query: 318 S 318
Sbjct: 354 G 354
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 68.7 bits (166), Expect = 4e-13
Identities = 16/226 (7%), Positives = 50/226 (22%), Gaps = 27/226 (11%)
Query: 1 MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWY 60
+K + V ++ + A L + +R
Sbjct: 148 LKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYR-SLDPSPD 206
Query: 61 LTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIW-YLTERESGIANV 119
V + + N + P +G+ +++ + +
Sbjct: 207 RVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDY 266
Query: 120 EFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNK 179
L +V ++ ++ +
Sbjct: 267 RMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYD---------------------- 304
Query: 180 EHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGK 225
+ T+ + ++ D+ S ++ D + + K +
Sbjct: 305 ---VKTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPE 347
Score = 67.2 bits (162), Expect = 1e-12
Identities = 18/190 (9%), Positives = 45/190 (23%), Gaps = 19/190 (10%)
Query: 79 RHQKAVNVVRFSPNGELLASG-DDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRF 137
F + + L V + + N +
Sbjct: 176 TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235
Query: 138 SPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYD 197
P +G+ + + + NV+ + + L +
Sbjct: 236 VPRSMTSEAGEYDLNDMYKRSS--------------PINVDPGDYRMIIPLESSILIYSV 281
Query: 198 ISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRS 257
+ + + +DV K +TE K + + + V D
Sbjct: 282 PVHGEFAAYYQGAPEKGVLLKYDVKTRK----VTEVKNNLTDLRLSADRKTVMVRKDDGK 337
Query: 258 LRTYSIQSKK 267
+ T+ ++ +
Sbjct: 338 IYTFPLEKPE 347
Score = 55.6 bits (132), Expect = 8e-09
Identities = 41/366 (11%), Positives = 80/366 (21%), Gaps = 59/366 (16%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 139
+ VR + ++ + + + +G A + V +
Sbjct: 41 EPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKF-----EENLGNVFAMGVDR 95
Query: 140 NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDIS 199
NG+ +D I+ +T + S + +
Sbjct: 96 NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDN-----------SRFIAY 144
Query: 200 WSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLR 259
P G V ++D+ K T A+D ++ + LS
Sbjct: 145 GFPLKHGETDGYVMQAIHVYDMEGRKIFAA-TTENSHDYAPAFDADSKNLYYLSYRSLDP 203
Query: 260 TYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSG 319
+ + + P A
Sbjct: 204 SPDRVVLNFSFEVVSKPFVIP------------LIPGSPNPT----KLVPRSMTSEAGEY 247
Query: 320 CLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKL 379
L + PI+V R L+ +
Sbjct: 248 DLNDMYKRSSPINVDPGDYRMI--------IPLESSILIYSVPV-------------HGE 286
Query: 380 PYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSII 439
+ +L YD + N+ TD+ S+D K ++ DG
Sbjct: 287 FAAYYQGAPEKGVLLKYDVKTRKVTEVKNNL-----TDLRLSADRKTVMVRKDDGKIYTF 341
Query: 440 SFGDNE 445
E
Sbjct: 342 PLEKPE 347
Score = 48.3 bits (113), Expect = 2e-06
Identities = 9/110 (8%), Positives = 28/110 (25%), Gaps = 12/110 (10%)
Query: 55 TGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERE 113
+ + L +V + G + + R+
Sbjct: 250 NDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK 309
Query: 114 SGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQD 163
++ + + +R S + + + D+ I + + +D
Sbjct: 310 -----------VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPED 348
Score = 39.5 bits (90), Expect = 0.001
Identities = 23/242 (9%), Positives = 61/242 (25%), Gaps = 9/242 (3%)
Query: 195 VYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS 254
+ +SP LI+ A + DV G + + ++ V + +
Sbjct: 5 KFAEDFSPLDGDLIAFVSRGQAFIQDV-SGTYVLKVP-EPLRIRYVRRGGDTKVAFIHGT 62
Query: 255 D--RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQ 312
L Y ++ K + + V + + + +D + L
Sbjct: 63 REGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV 121
Query: 313 LLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSD 372
+ + + + + + + F + ++ Y + + D
Sbjct: 122 IERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHD 181
Query: 373 DKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASST 432
P F + + ++ + D + +K I
Sbjct: 182 YAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE----VVSKPFVIPLIPGSPNPTKLVP 237
Query: 433 DG 434
Sbjct: 238 RS 239
Score = 35.2 bits (79), Expect = 0.018
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 28/118 (23%)
Query: 134 VVRFSP-NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHL 192
FSP +G+L+A + ++ V +
Sbjct: 7 AEDFSPLDGDLIAFVSR-GQAFIQ--------------DVSGTYV---------LKVPEP 42
Query: 193 EDVYDISWSPTSTHLISGSVDNTAI--MWDVHKGKNLGILTEHKKFVQGVAWDPKNQY 248
+ + + ++D GK E+ V + D ++
Sbjct: 43 LRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK-AEKFEENLGNVFAMGVDRNGKF 99
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 67.7 bits (163), Expect = 6e-13
Identities = 25/297 (8%), Positives = 74/297 (24%), Gaps = 40/297 (13%)
Query: 184 VTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTE-HKKFVQGVAW 242
+ ++ GH + + +S S L S + WD+ G + + + H + G+
Sbjct: 4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 63
Query: 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVD---------------------- 280
+ T+S D L+ V S +
Sbjct: 64 TS-KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122
Query: 281 -------------SSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDST 327
S + + + ++ ++ + +
Sbjct: 123 AIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEI 182
Query: 328 RKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAV 387
+ ++ +P + + + +
Sbjct: 183 TSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATG 242
Query: 388 ATENNILLYDTQHASPFAFIA-NIHYTKLTDITWSSDGKVLIASSTDGYCSI--ISF 441
+ +N++++++ S I H + + ++++ D + F
Sbjct: 243 SLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVPF 299
Score = 40.0 bits (91), Expect = 5e-04
Identities = 4/46 (8%), Positives = 17/46 (36%)
Query: 224 GKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVI 269
G + H K + ++ + + + ++ + ++ I +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISN 47
Score = 39.2 bits (89), Expect = 0.001
Identities = 20/144 (13%), Positives = 43/144 (29%), Gaps = 7/144 (4%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 138
H KA+ + S +G+ L S D G W ++ H + ++ +
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDISTGI------SNRVFPDVHATMITGIKTT 64
Query: 139 PNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI 198
G+L D+ +V + D + ++ L + + I I
Sbjct: 65 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAI 124
Query: 199 SWSPTSTHLISGSVDNTAIMWDVH 222
T + + + +
Sbjct: 125 YSHGKLTEVPISYNSSCVALSNDK 148
Score = 33.0 bits (73), Expect = 0.100
Identities = 8/29 (27%), Positives = 11/29 (37%), Gaps = 1/29 (3%)
Query: 128 HQKAVNVVRFSPNGELLASGDDESTIIVW 156
+VN V N + S +S I W
Sbjct: 268 AMSSVNSV-IWLNETTIVSAGQDSNIKFW 295
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 68.3 bits (165), Expect = 6e-13
Identities = 11/95 (11%), Positives = 32/95 (33%), Gaps = 19/95 (20%)
Query: 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187
+ ++ ++ + +A + + ++ + W+
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIY-------------------EKSGNKWVQVHE 46
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVH 222
L+ H V + W+P S +++ D A +W +
Sbjct: 47 LKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 81
Score = 66.8 bits (161), Expect = 2e-12
Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 191 HLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN--LGILTEHKKFVQGVAWDPKNQY 248
+E + +W+ T + ++ +++ K + L EH V GV W P +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 249 VATLSSDRSLRTYSIQ 264
+ T +DR+ ++++
Sbjct: 66 IVTCGTDRNAYVWTLK 81
Score = 62.6 bits (150), Expect = 4e-11
Identities = 54/383 (14%), Positives = 110/383 (28%), Gaps = 57/383 (14%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 138
+ ++ ++ + +A + + I+ + + +L H V V ++
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-----WVQVHELKEHNGQVTGVDWA 60
Query: 139 PNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI 198
P+ + + + VW + W T ++ +
Sbjct: 61 PDSNRIVTCGTDRNAYVW-------------------TLKGRTWKPTLVILRINRAARCV 101
Query: 199 SWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF----VQGVAWDPKNQYVATLSS 254
W+P GS + + + + KK V + W P + +A S
Sbjct: 102 RWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 161
Query: 255 DRSLRTYSIQSKKVISRACRSKLPVDS-----SHELFDKVVPLFHDDTMKSFFRRLTFSP 309
D R +S K+V R + E + + R S
Sbjct: 162 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH 221
Query: 310 DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELK 369
D + +A K ++V + + + + C PVLF
Sbjct: 222 DSTVCLAD---------ADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYD 272
Query: 370 PSDDKPLFKLPYRIVIAVAT-----ENNILLYDTQ-----HASPFAFIANIHYTKLTDIT 419
+ K F + + D + A+ A + ++H ++ I+
Sbjct: 273 SAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQIS 332
Query: 420 WSSDGK----VLIASSTDGYCSI 438
S GK + DG SI
Sbjct: 333 VLSGGKAKCSQFCTTGMDGGMSI 355
Score = 42.5 bits (98), Expect = 1e-04
Identities = 41/297 (13%), Positives = 86/297 (28%), Gaps = 32/297 (10%)
Query: 9 SWHN--RDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERES 66
++H+ +P+ KD I + V I+ + +
Sbjct: 1 AYHSFLVEPISCHAWN----KDRTQ-IAICPNNHEV--------------HIYEKSGNK- 40
Query: 67 GIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLS 126
+L H V V ++P+ + + + + +
Sbjct: 41 ----WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW----TLKGRTWKPTLVIL 92
Query: 127 RHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEEN-VNKEHWIVT 185
R +A VR++PN + A G I + + + D + V W
Sbjct: 93 RINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN 152
Query: 186 KILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPK 245
+L + + T + G+ + + +V GV +
Sbjct: 153 SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN 212
Query: 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFD-KVVPLFHDDTMKSF 301
VA +S D ++ K ++ LP+ + + + +V HD F
Sbjct: 213 GSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLF 269
Score = 40.6 bits (93), Expect = 5e-04
Identities = 20/117 (17%), Positives = 35/117 (29%), Gaps = 23/117 (19%)
Query: 128 HQKAVNVVRFSPNGELLASG-DDESTIIVWKQKTDQ-------DLPEFPSS--------- 170
+ V F L+A+G D + + + D+P+ S
Sbjct: 242 ETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF 301
Query: 171 -NLDEEN-VNKEHWIVTKILRGHLEDVYDISWSPTS----THLISGSVDNTAIMWDV 221
NLD++ + H V IS + + +D +WDV
Sbjct: 302 QNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 358
Score = 35.2 bits (79), Expect = 0.022
Identities = 5/41 (12%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Query: 126 SRHQKAVNVVRFSPNGE----LLASGDDESTIIVWKQKTDQ 162
S H+ +V+ + G+ + + + +W ++ +
Sbjct: 322 SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 362
Score = 29.4 bits (64), Expect = 1.5
Identities = 4/31 (12%), Positives = 9/31 (29%)
Query: 416 TDITWSSDGKVLIASSTDGYCSIISFGDNEI 446
+ W+ D + + I N+
Sbjct: 11 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKW 41
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 62.2 bits (149), Expect = 4e-11
Identities = 30/321 (9%), Positives = 77/321 (23%), Gaps = 25/321 (7%)
Query: 121 FASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKE 180
F S + V+ +P G+ + + +++ +
Sbjct: 9 FPSLPRTARGTAVVLGNTPAGDKIQYCNG-TSVYTV--------------PVGSLTD--- 50
Query: 181 HWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL--TEHKKFVQ 238
T+I H SP+ + SG V +WD + ++ V+
Sbjct: 51 ----TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVK 106
Query: 239 GVAWDPKNQYV-ATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDT 297
++WD +++ + A + + + +S + +
Sbjct: 107 DISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGS 166
Query: 298 MKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSV 357
+ P P T V
Sbjct: 167 DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV 226
Query: 358 AVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTD 417
S + + + + + I +++ I +
Sbjct: 227 FEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ 286
Query: 418 ITWSSDGKVLIASSTDGYCSI 438
+ + L++ S +G+ +
Sbjct: 287 LGIIWTKQALVSISANGFINF 307
Score = 52.6 bits (124), Expect = 5e-08
Identities = 18/150 (12%), Positives = 37/150 (24%), Gaps = 7/150 (4%)
Query: 73 FASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAV 132
F S + V+ +P G+ + + + ++ + H
Sbjct: 9 FPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVP-------VGSLTDTEIYTEHSHQT 61
Query: 133 NVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHL 192
V + SP+G ASGD + +W + + + +K +
Sbjct: 62 TVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVG 121
Query: 193 EDVYDISWSPTSTHLISGSVDNTAIMWDVH 222
E S
Sbjct: 122 EGRERFGHVFLFDTGTSNGNLTGQARAMNS 151
Score = 44.5 bits (103), Expect = 2e-05
Identities = 38/275 (13%), Positives = 88/275 (32%), Gaps = 39/275 (14%)
Query: 68 IANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSR 127
+ ++ + H V + SP+G ASGD G + T + + I
Sbjct: 45 VGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGP 104
Query: 128 --------------------HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEF 167
+ + + +G + V + +
Sbjct: 105 VKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIIS 164
Query: 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL 227
S + + H + V+ + ++P + S D T ++++ G
Sbjct: 165 GSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKT 224
Query: 228 GI-------LTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVD 280
G+ H V G+ W P +A+ S+D++++ +++ + K +PV
Sbjct: 225 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK-----VEKTIPVG 279
Query: 281 SSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315
+ E D+ + + ++ S +G +
Sbjct: 280 TRIE--DQQLGIIWTKQ-----ALVSISANGFINF 307
Score = 40.7 bits (93), Expect = 3e-04
Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 20/82 (24%)
Query: 139 PNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDI 198
P+G +AS + TI +W T + P G + +
Sbjct: 248 PDGTKIASASADKTIKIWNVATLKVEKTIPV--------------------GTRIEDQQL 287
Query: 199 SWSPTSTHLISGSVDNTAIMWD 220
T L+S S + +
Sbjct: 288 GIIWTKQALVSISANGFINFVN 309
Score = 32.2 bits (71), Expect = 0.17
Identities = 10/68 (14%), Positives = 20/68 (29%), Gaps = 9/68 (13%)
Query: 91 PNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQK-AVNVVRFSPNGELLASGD 148
P+G +AS +IW +A ++ + + + + L S
Sbjct: 248 PDGTKIASASADKTIKIW-------NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 300
Query: 149 DESTIIVW 156
I
Sbjct: 301 ANGFINFV 308
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 61.4 bits (147), Expect = 8e-11
Identities = 9/73 (12%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 186 KILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL---TEHKKFVQGVAW 242
+I + + + DI P+ + L+ S D + ++ L +K + +
Sbjct: 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNF 64
Query: 243 DPKNQYVATLSSD 255
+ +
Sbjct: 65 IDNTDLQIYVGTV 77
Score = 56.0 bits (133), Expect = 6e-09
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 7/139 (5%)
Query: 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187
+ +V E A + + V + + +
Sbjct: 193 KYQIRDVALLPKEQEGYACSSIDGRVAVE------FFDDQGDDYNSSKRFAFRCHRLNLK 246
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247
V I +SP L + D W++ K + + + V +
Sbjct: 247 DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE-DSVVKIACSDN 305
Query: 248 YVATLSSDRSLRTYSIQSK 266
+ +SD + +T + +
Sbjct: 306 ILCLATSDDTFKTNAAIDQ 324
Score = 48.3 bits (113), Expect = 1e-06
Identities = 7/96 (7%), Positives = 24/96 (25%), Gaps = 18/96 (18%)
Query: 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187
+ ++ ++ P+ LL + ++ V+K +
Sbjct: 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL------------------LQ 51
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHK 223
+ + ++ + I I+
Sbjct: 52 SLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87
Score = 44.1 bits (102), Expect = 3e-05
Identities = 25/273 (9%), Positives = 64/273 (23%), Gaps = 46/273 (16%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 138
+ ++ ++ P+ LL G ++ + + NV+ L ++ + F
Sbjct: 10 PKDYISDIKIIPSKSLLLITSWDGSLTVY---KFDIQAKNVDLLQSLR-YKHPLLCCNFI 65
Query: 139 PNGE-LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWI-------------- 183
N + + G + I+ ++ + +
Sbjct: 66 DNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIE 125
Query: 184 --------VTKILRGHLEDVYDISWSPTSTHLISGSV------DNTAIMWDVHKGKNLGI 229
I +L + T + S ++ + + ++
Sbjct: 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185
Query: 230 ----LTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHEL 285
+ + + A S D + + S
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ--------GDDYNSSKRFA 237
Query: 286 FDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPS 318
F D + + FSP + L
Sbjct: 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG 270
Score = 39.4 bits (90), Expect = 0.001
Identities = 15/140 (10%), Positives = 39/140 (27%), Gaps = 39/140 (27%)
Query: 195 VYDISWSPTSTHLISGSVDNTAIMWDVHKG---------------KNLGILTEHKKFVQG 239
S+D + + T V
Sbjct: 197 RDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS 256
Query: 240 VAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMK 299
+ + P+++++ T SD + +++Q++K I K F++D++
Sbjct: 257 IEFSPRHKFLYTAGSDGIISCWNLQTRKKI------------------KNFAKFNEDSV- 297
Query: 300 SFFRRLTFSPDGQLLIAPSG 319
+ + +L +
Sbjct: 298 -----VKIACSDNILCLATS 312
Score = 38.7 bits (88), Expect = 0.002
Identities = 15/92 (16%), Positives = 21/92 (22%), Gaps = 20/92 (21%)
Query: 229 ILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDK 288
I K ++ + P + S D SL Y + K
Sbjct: 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA--------------------K 45
Query: 289 VVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGC 320
V L K F + L I
Sbjct: 46 NVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV 77
Score = 30.2 bits (66), Expect = 0.80
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 407 IANIHYTKLTDITWSSDGKVLIASSTDGYCSI 438
I ++DI +L+ +S DG ++
Sbjct: 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTV 37
Score = 28.7 bits (62), Expect = 2.1
Identities = 8/51 (15%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 80 HQKAVNVVRFSPNGELL--ASGDDVGKEIWYLTERESGIANVEFASDLSRH 128
+VV+ + + +L A+ DD K + + A+ + +
Sbjct: 291 KFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIFDYEN 341
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 59.2 bits (141), Expect = 4e-10
Identities = 32/183 (17%), Positives = 56/183 (30%), Gaps = 21/183 (11%)
Query: 73 FASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQ-KA 131
S + + + P +A + L + +S + V + H
Sbjct: 9 IPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPV---VQFTGHGSSV 65
Query: 132 VNVVRFSP--NGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR 189
V V+FSP + L SGD+ +IVW D++ V +
Sbjct: 66 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSV-------------EVNVKSEFQ 112
Query: 190 GHLEDVYDISWSPTSTHLI--SGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247
+ DISW L DN + G +LG ++ H + +
Sbjct: 113 VLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRP 172
Query: 248 YVA 250
+
Sbjct: 173 MRS 175
Score = 53.4 bits (126), Expect = 3e-08
Identities = 35/336 (10%), Positives = 76/336 (22%), Gaps = 40/336 (11%)
Query: 121 FASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKE 180
S + + + P +A +S + D +P
Sbjct: 9 IPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQ----------- 57
Query: 181 HWIVTKILRGHLED-VYDISWSPT--STHLISGSVDNTAIMWDVHKGKNLGIL------- 230
GH V + +SP S +L SG I+W K +
Sbjct: 58 -------FTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSE 110
Query: 231 -TEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKV 289
+ ++WD + + + R S ++ S +
Sbjct: 111 FQVLAGPISDISWDFEGRRLCV---VGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHL 167
Query: 290 VPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCL 349
+M G + + V
Sbjct: 168 KQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD 227
Query: 350 PSLQYYSVAVKCCPVLFELKPSDDKPLFKLPY----RIVIAVATENNILLYDTQHASP-- 403
+ + E + + V + I ++D +
Sbjct: 228 RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQ 287
Query: 404 -FAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSI 438
+ + + + +G+ +I+ S DG +
Sbjct: 288 KWTLDKQQLGNQQVGVVATGNGR-IISLSLDGTLNF 322
Score = 48.0 bits (112), Expect = 2e-06
Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 3/86 (3%)
Query: 181 HWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240
+ + ++ S + D T +WDV K + T K+ +
Sbjct: 240 FLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQ 299
Query: 241 AWD---PKNQYVATLSSDRSLRTYSI 263
N + +LS D +L Y +
Sbjct: 300 QVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 29.1 bits (63), Expect = 1.6
Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 7/69 (10%)
Query: 91 PNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGE-LLASGD 148
+ + A+ +W +T + L + Q V G + S
Sbjct: 261 LDSQKFATVGADATIRVWDVTTSK-----CVQKWTLDKQQLGNQQVGVVATGNGRIISLS 315
Query: 149 DESTIIVWK 157
+ T+ ++
Sbjct: 316 LDGTLNFYE 324
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 59.1 bits (141), Expect = 5e-10
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Query: 185 TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244
K+L+GH + V ++SGS DNT +W GK L L H V
Sbjct: 9 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD 67
Query: 245 KNQY 248
Sbjct: 68 NIII 71
Score = 52.1 bits (123), Expect = 1e-07
Identities = 49/344 (14%), Positives = 95/344 (27%), Gaps = 62/344 (18%)
Query: 125 LSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIV 184
L H V G + SG D++T+ VW T + L
Sbjct: 12 LKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCL-------------------- 50
Query: 185 TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244
+ L GH V+ S + + + T +
Sbjct: 51 -RTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIH----TLYGHTSTVRCMHL 105
Query: 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSF--- 301
+ V + S D +LR + I++ + + V +VV +D +K +
Sbjct: 106 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 165
Query: 302 ------------FRRLTFSPDGQLLIAPSGCLENS--------DSTRKPISVTHVFTRAC 341
R + DG ++ SG L+ S + ++ T
Sbjct: 166 TETCLHTLQGHTNRVYSLQFDGIHVV--SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 223
Query: 342 LNKPAVCLPSLQYYSVAV-------KCCPVLFELKPSDDKPLFKLPYRIVIAVATENNIL 394
K + + +V + + K + VI + + +
Sbjct: 224 ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVK 283
Query: 395 LYDTQ----HASPFAFIANIHYTKLTDITWSSDGKVLIASSTDG 434
L+D + + + + I S+ V S +G
Sbjct: 284 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 327
Score = 50.2 bits (118), Expect = 4e-07
Identities = 36/239 (15%), Positives = 65/239 (27%), Gaps = 26/239 (10%)
Query: 77 LSRHQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVV 135
L H V G + SG D ++W + L H V
Sbjct: 12 LKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTG-------KCLRTLVGHTGGVWSS 63
Query: 136 RFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNL---------------DEENVNKE 180
+ N + S D + + +S + D +
Sbjct: 64 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 123
Query: 181 HWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGV 240
+ ++SG+ D +WD L L H V +
Sbjct: 124 IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 183
Query: 241 AWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMK 299
+D +V + S D S+R + +++ I + + +V D T+K
Sbjct: 184 QFDGI--HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK 240
Score = 46.7 bits (109), Expect = 5e-06
Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 50/197 (25%)
Query: 29 NCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVR 88
+ +V+G D+ + + ++ + + T
Sbjct: 186 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ-----------------------SLTSG 222
Query: 89 FSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG 147
+L SG+ +IW + + ++ ++HQ AV ++F+ N + +S
Sbjct: 223 MELKDNILVSGNADSTVKIWDIKTGQ----CLQTLQGPNKHQSAVTCLQFNKNFVITSSD 278
Query: 148 DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL 207
D T+ +W KT + + T G V+ I S T
Sbjct: 279 D--GTVKLWDLKTGEFIRNLV----------------TLESGGSGGVVWRIRASNTKLVC 320
Query: 208 ISGSVDNTA----IMWD 220
GS + T ++ D
Sbjct: 321 AVGSRNGTEETKLLVLD 337
Score = 41.3 bits (95), Expect = 2e-04
Identities = 32/220 (14%), Positives = 67/220 (30%), Gaps = 19/220 (8%)
Query: 219 WDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLP 278
W + K+ +L H V + + S D +L+ +S + K +
Sbjct: 1 WRRGELKSPKVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 279 VDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFT 338
V SS + ++ D T+K + + + R
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 339 RACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDT 398
R + CL L + AV+C R V++ A + + ++D
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQY---------------DGRRVVSGAYDFMVKVWDP 164
Query: 399 QHASPFAFIANIHYTKLTDITWSSDGKVLIASSTDGYCSI 438
+ + + + + DG +++ S D +
Sbjct: 165 ETETC---LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRV 201
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 59.1 bits (141), Expect = 5e-10
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247
LRGH+ V ++I+G+ D ++D K L L+ H V + +
Sbjct: 8 LRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI 66
Query: 248 YVA 250
V+
Sbjct: 67 LVS 69
Score = 57.2 bits (136), Expect = 2e-09
Identities = 41/363 (11%), Positives = 94/363 (25%), Gaps = 30/363 (8%)
Query: 77 LSRHQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVV 135
L H +V + +G D ++ ++ F LS H V +
Sbjct: 8 LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKK-------FLLQLSGHDGGVWAL 59
Query: 136 RFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLED- 194
+++ G +L SG + T+ VW K F N ++ + K + D
Sbjct: 60 KYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDN 118
Query: 195 ---VYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVAT 251
V+ + + +G+L H V+ V+ +
Sbjct: 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 178
Query: 252 LSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDG 311
+ + + I ++ + + D T++ +
Sbjct: 179 YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT 238
Query: 312 QLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPS 371
L + R S + +++
Sbjct: 239 LQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITT------FYV 292
Query: 372 DDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIASS 431
D ++ +EN +Y+ + ++ + + ++ A
Sbjct: 293 SDN---------ILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVE 342
Query: 432 TDG 434
DG
Sbjct: 343 KDG 345
Score = 56.1 bits (133), Expect = 6e-09
Identities = 41/323 (12%), Positives = 88/323 (27%), Gaps = 32/323 (9%)
Query: 125 LSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIV 184
L H +V + +G D+ I V+ +
Sbjct: 8 LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKK---------------------F 45
Query: 185 TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHK--KFVQGVAW 242
L GH V+ + ++ L+SGS D T +WD+ KG + H +
Sbjct: 46 LLQLSGHDGGVWALKYAHGGI-LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVE 104
Query: 243 DPKNQYVATLSSDRSLRTYSIQSKKVISRA----CRSKLPVDSSHELFDKVVPLFHDDTM 298
+Y+ T S D +L + + + + + + V H ++
Sbjct: 105 YKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV 164
Query: 299 KSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVA 358
++ G +S + +
Sbjct: 165 RTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT 224
Query: 359 VKCCPV---LFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKL 415
++ + L L + + A+ ++ + H+T L
Sbjct: 225 IRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNL 284
Query: 416 TDITWSSDGKVLIASSTDGYCSI 438
+ IT ++ S ++ +I
Sbjct: 285 SAITTFYVSDNILVSGSENQFNI 307
Score = 49.5 bits (116), Expect = 6e-07
Identities = 11/80 (13%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Query: 181 HWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLG-ILTEHKKFVQG 239
++ H ++ I+ S +++ +N ++++ GK + + + +
Sbjct: 270 ANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWS 329
Query: 240 VAWDPKNQYVATLSSDRSLR 259
V + K VA + D
Sbjct: 330 VNFKGKTL-VAAVEKDGQSF 348
Score = 47.6 bits (111), Expect = 3e-06
Identities = 11/77 (14%), Positives = 27/77 (35%), Gaps = 7/77 (9%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 139
H + F + +L SG + I+ L + +++ + + V F
Sbjct: 281 HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGK------LVHANILKDADQIWSVNFKG 334
Query: 140 NGELLASGDDESTIIVW 156
L+A+ + + +
Sbjct: 335 KT-LVAAVEKDGQSFLE 350
Score = 47.2 bits (110), Expect = 4e-06
Identities = 46/303 (15%), Positives = 104/303 (34%), Gaps = 42/303 (13%)
Query: 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91
++TG D + +++ ++ F LS H V ++++
Sbjct: 25 YVITGADDKMI--------------RVYDSINKK-------FLLQLSGHDGGVWALKYAH 63
Query: 92 NGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDES 151
G L++ D +W + + + N + + +G ++
Sbjct: 64 GGILVSGSTDRTVRVWDIKKGCCTHVFEGH-----NSTVRCLDIVEYKNIKYIVTGSRDN 118
Query: 152 TIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGS 211
T+ VWK + +P+ + + + + S ++SGS
Sbjct: 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 178
Query: 212 VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISR 271
DNT I+WDV + K L IL+ H + +D + + + S D ++R + +++ +++
Sbjct: 179 YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT 238
Query: 272 ACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR----------------LTFSPDGQLLI 315
V +V D +++ + TF +L+
Sbjct: 239 LQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILV 298
Query: 316 APS 318
+ S
Sbjct: 299 SGS 301
Score = 32.9 bits (73), Expect = 0.12
Identities = 9/78 (11%), Positives = 22/78 (28%), Gaps = 20/78 (25%)
Query: 32 RIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSP 91
I+ G+++ I+ L + +++ + + V F
Sbjct: 295 NILVSGSENQF--------------NIYNLRSGK------LVHANILKDADQIWSVNFKG 334
Query: 92 NGELLASGDDVGKEIWYL 109
+ A D + L
Sbjct: 335 KTLVAAVEKDGQSFLEIL 352
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 54.4 bits (129), Expect = 2e-08
Identities = 30/259 (11%), Positives = 68/259 (26%), Gaps = 35/259 (13%)
Query: 68 IANVEFASDLSRHQKAVNVVRFSPNGELLASGD-DVGKEIWYLTERESGIANVEFAS--- 123
+ +S +++ SP+G+ + + + + + + A
Sbjct: 75 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 134
Query: 124 ----DLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSN-LDEENVN 178
+ V ++R + +G L +G D + V K LP +
Sbjct: 135 AKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDV 194
Query: 179 KEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGIL-TEHKKFV 237
W + + + + D+ GK + +
Sbjct: 195 LYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELY 254
Query: 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDT 297
PK+ +R L Y ++ +K+I +D +
Sbjct: 255 FTGLRSPKDPNQIYGVLNR-LAKYDLKQRKLIKA-----ANLDHT--------------- 293
Query: 298 MKSFFRRLTFSPDGQLLIA 316
+ + F G L
Sbjct: 294 ----YYCVAFDKKGDKLYL 308
Score = 54.4 bits (129), Expect = 2e-08
Identities = 25/317 (7%), Positives = 57/317 (17%), Gaps = 43/317 (13%)
Query: 137 FSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVY 196
E + + + + V +D + +
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDT--------------------VYKSCVMPDKFGPG 43
Query: 197 DISWSPTSTHL-ISGSVDNTAIMWDVHKGKNLGILT------EHKKFVQGVAWDPKNQYV 249
+P + + + D+ KN E + + A P + V
Sbjct: 44 TAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEV 103
Query: 250 ATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSP 309
+ ++++ ++ M + +
Sbjct: 104 YATVNP---------TQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 154
Query: 310 DGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELK 369
DG L +A + T K + S E
Sbjct: 155 DGSLYVAGPDIYKMDVKTGKYTVALPLRNWNR------KGYSAPDVLYFWPHQSPRHEFS 208
Query: 370 PSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIA 429
FK + L D + S
Sbjct: 209 MLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP-NQI 267
Query: 430 SSTDGYCSIISFGDNEI 446
+ ++
Sbjct: 268 YGVLNRLAKYDLKQRKL 284
Score = 41.3 bits (95), Expect = 2e-04
Identities = 15/170 (8%), Positives = 32/170 (18%), Gaps = 23/170 (13%)
Query: 198 ISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT-EHKKFVQGVAWDPKNQYV-ATLSSD 255
+ ++I + N + DV K P N+ +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 256 RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLI 315
+ + + K + SPDG+ +
Sbjct: 62 GDIYGIDLDTCKN-----------------TFHANLSSVPGEVGRSMYSFAISPDGKEVY 104
Query: 316 ----APSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKC 361
++ + V Q Y +
Sbjct: 105 ATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 154
Score = 39.7 bits (91), Expect = 8e-04
Identities = 9/106 (8%), Positives = 26/106 (24%), Gaps = 23/106 (21%)
Query: 126 SRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVT 185
+ + SP G + + + K + ++
Sbjct: 248 ADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRK--------------------LIK 286
Query: 186 KILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT 231
H Y +++ L G N +++ + + +
Sbjct: 287 AANLDH--TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 330
Score = 33.6 bits (75), Expect = 0.059
Identities = 9/78 (11%), Positives = 18/78 (23%), Gaps = 22/78 (28%)
Query: 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTM 298
G A ++Y+ + +L + S V +P
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSC---VMPDKFGP--------------- 42
Query: 299 KSFFRRLTFSPDGQLLIA 316
+PD +
Sbjct: 43 ----GTAMMAPDNRTAYV 56
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 54.2 bits (128), Expect = 2e-08
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 9/66 (13%)
Query: 184 VTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWD 243
V K + GH + + ++ +P LISGS D + W +H + +
Sbjct: 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLDNS 55
Query: 244 PKNQYV 249
+Y
Sbjct: 56 KAQEYS 61
Score = 50.0 bits (117), Expect = 4e-07
Identities = 39/314 (12%), Positives = 81/314 (25%), Gaps = 39/314 (12%)
Query: 125 LSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIV 184
+S H K + + +P L SG + I+ W
Sbjct: 9 ISGHNKGITALTVNP----LISGSYDGRIMEWS--------------------------S 38
Query: 185 TKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244
+ + + H + + S + I WD N E + + +
Sbjct: 39 SSMHQDHSNLIVSLDNSKAQEYSS--------ISWDDTLKVNGITKHEFGSQPKVASANN 90
Query: 245 KNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304
+ D L S + S S S + + V +
Sbjct: 91 DGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSD 150
Query: 305 LTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPV 364
L S D + + + + I+ V + L ++
Sbjct: 151 LEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINA 210
Query: 365 LFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDG 424
+ ++ +V + + NI +Y + N H + ++ W +
Sbjct: 211 ISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS 270
Query: 425 KVLIASSTDGYCSI 438
L++S D
Sbjct: 271 T-LVSSGADACIKR 283
Score = 49.6 bits (116), Expect = 4e-07
Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 21/94 (22%)
Query: 128 HQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKI 187
+L+A+G ++ I ++ K + K
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKI--------------------IKA 253
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDV 221
L H + V ++ W ST L+S D W+V
Sbjct: 254 LNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286
Score = 39.6 bits (90), Expect = 7e-04
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Query: 80 HQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVVRFS 138
+L+A+G I+ + I L+ H+ VN + +
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA------LNAHKDGVNNLLWE 267
Query: 139 PNGELLASGDDESTIIVWK 157
L++SG D + I W
Sbjct: 268 TPSTLVSSGAD-ACIKRWN 285
Score = 35.3 bits (79), Expect = 0.017
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 20/101 (19%)
Query: 1 MKCTIPEISWHNRDPVLSVDIQLKQEKDNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWY 60
S N + +E+ + TG D+++ I+
Sbjct: 198 TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI--------------FIYS 243
Query: 61 LTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDD 101
+ I L+ H+ VN + + L++SG D
Sbjct: 244 VKRPMKIIKA------LNAHKDGVNNLLWETPSTLVSSGAD 278
Score = 33.8 bits (75), Expect = 0.055
Identities = 12/68 (17%), Positives = 20/68 (29%), Gaps = 17/68 (25%)
Query: 77 LSRHQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVV 135
+S H K + + +P L SG G+ W + H + +
Sbjct: 9 ISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQD------------HSNLIVSL 52
Query: 136 RFSPNGEL 143
S E
Sbjct: 53 DNSKAQEY 60
Score = 29.2 bits (63), Expect = 1.7
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 223 KGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQS 265
+ L ++ H K + + +P + + S D + +S S
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS 40
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 50.2 bits (119), Expect = 4e-07
Identities = 28/212 (13%), Positives = 59/212 (27%), Gaps = 19/212 (8%)
Query: 48 KIPHRLKTGKIWYLTERESG-IANVEFASD--LSRHQ--KAVNVVRFSPNGELLASGDDV 102
+ + ++ +T R++G IA ++ ++ + AV++ R S +G L
Sbjct: 23 QQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRD 82
Query: 103 GKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELL-ASGDDESTIIVWKQKTD 161
GK + V S + + A ++ +T
Sbjct: 83 GKVNMIDLWMKEPTT-VAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 141
Query: 162 QDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI-SGSVDNTAIMWD 220
+ + V I S I + ++ D
Sbjct: 142 EPKKIQS----------TRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVD 191
Query: 221 VHKGKNLGILT-EHKKFVQGVAWDPKNQYVAT 251
NL ++F+ D ++Y T
Sbjct: 192 YTDLNNLKTTEISAERFLHDGGLDGSHRYFIT 223
Score = 42.9 bits (100), Expect = 9e-05
Identities = 27/224 (12%), Positives = 62/224 (27%), Gaps = 34/224 (15%)
Query: 103 GKEIWYLTERESG-IANVEFASD--LSRHQ--KAVNVVRFSPNGELLASGDDESTIIVWK 157
+ ++ +T R++G IA ++ ++ + AV++ R S +G L + + +
Sbjct: 30 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMID 89
Query: 158 QKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI-SGSVDNTA 216
+ KI + I
Sbjct: 90 LWMKEPTTVAE----------------IKIGSEARSIETSKMEGWEDKYAIAGAYWPPQY 133
Query: 217 IMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSS-DRSLRTYSIQSKKVISRACRS 275
++ D + I + + P+ + A L+S R +++ I
Sbjct: 134 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL---- 189
Query: 276 KLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSG 319
VD + K + + F + I +
Sbjct: 190 ---VDYTDLNNLKTTEISAER----FLHDGGLDGSHRYFITAAN 226
Score = 32.8 bits (74), Expect = 0.12
Identities = 21/134 (15%), Positives = 40/134 (29%), Gaps = 18/134 (13%)
Query: 34 VTGGADSHVFDYLLKIPHRLKT-GKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPN 92
+ G D KI G + + + L+ + V +
Sbjct: 281 LIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSV-AVFD 339
Query: 93 GELLASG-DDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG-ELLAS---- 146
+ + D + + E + ++ Q V F+ +G E+ S
Sbjct: 340 IKAMTGDGSDPEFKTLPIAEW----------AGITEGQPRVVQGEFNKDGTEVWFSVWNG 389
Query: 147 GDDESTIIVWKQKT 160
D ES ++V KT
Sbjct: 390 KDQESALVVVDDKT 403
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 48.7 bits (114), Expect = 8e-07
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 14/77 (18%)
Query: 144 LASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPT 203
+ SG + I VW D + + L H V+ + +
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAP------------AGTLCLRTLVEHSGRVFRLQFDEF 278
Query: 204 STHLISGSVDNTAIMWD 220
++S S D+T ++WD
Sbjct: 279 --QIVSSSHDDTILIWD 293
Score = 48.7 bits (114), Expect = 1e-06
Identities = 20/136 (14%), Positives = 41/136 (30%), Gaps = 34/136 (25%)
Query: 133 NVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHL 192
+ L+ SG ++TI +W + L + ++
Sbjct: 180 GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK---------- 229
Query: 193 EDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKN---------LGILTEHKKFVQGVAWD 243
++SG+ D +WD+ + L L EH V + +D
Sbjct: 230 -------------RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 276
Query: 244 PKNQYVATLSSDRSLR 259
+ + S D ++
Sbjct: 277 EF--QIVSSSHDDTIL 290
Score = 47.5 bits (111), Expect = 2e-06
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 186 KILRGHLEDVYDI-SWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDP 244
+ + E + ++SG DNT +WD + + ILT H V + +D
Sbjct: 6 QRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE 65
Score = 43.7 bits (101), Expect = 3e-05
Identities = 33/242 (13%), Positives = 71/242 (29%), Gaps = 30/242 (12%)
Query: 77 LSRHQKAVNVVRFSPNGELLASGDDVGK-EIWYLTERESGIANVEFASDLSRHQKAVNVV 135
S K V + + + SG +IW E L+ H +V +
Sbjct: 11 RSETSKGVYC--LQYDDQKIVSGLRDNTIKIWDKNTL-------ECKRILTGHTGSVLCL 61
Query: 136 RFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWI------------ 183
++ + S D + + + N +
Sbjct: 62 QYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 121
Query: 184 ------VTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFV 237
+T +++S S D T +W+ + + L HK+ +
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI 181
Query: 238 QGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDT 297
+ + + V + SSD ++R + I+ + + V ++V +D
Sbjct: 182 ACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGK 239
Query: 298 MK 299
+K
Sbjct: 240 IK 241
Score = 33.7 bits (75), Expect = 0.048
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 188 LRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQ 247
L GH + + + ++SGS DNT +WD+ G L +L H++ V+ N+
Sbjct: 174 LNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC--IRFDNK 229
Query: 248 YVATLSSDRSLRTYSIQSKK 267
+ + + D ++ + + +
Sbjct: 230 RIVSGAYDGKIKVWDLVAAL 249
Score = 33.7 bits (75), Expect = 0.048
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 96 LASGDDVGK-EIWYLT--ERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDEST 152
+ SG GK ++W L A L H V ++F + S + T
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF--QIVSSSHDDT 288
Query: 153 IIVW 156
I++W
Sbjct: 289 ILIW 292
Score = 33.7 bits (75), Expect = 0.060
Identities = 7/48 (14%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 222 HKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVI 269
H + + +E K V + +D +Q + + D +++ + + +
Sbjct: 3 HSLQRIHCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECK 48
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 47.5 bits (111), Expect = 3e-06
Identities = 26/192 (13%), Positives = 51/192 (26%), Gaps = 9/192 (4%)
Query: 56 GKIWYLTERESGIANV-EFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERES 114
G + + G + + +N +S L GK
Sbjct: 168 GSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSS-- 225
Query: 115 GIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDE 174
+ +F + +A + P G + I + +S
Sbjct: 226 --GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVV 283
Query: 175 ENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI--SGSVDNTAIMWDVHKGKNLGILTE 232
K + K GH ++ I+ S L+ + D T + D G+ L + +
Sbjct: 284 VLDAKTGERLAKFEMGH--EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 341
Query: 233 HKKFVQGVAWDP 244
Q +
Sbjct: 342 LGHGPQVITTAD 353
Score = 36.7 bits (83), Expect = 0.007
Identities = 20/333 (6%), Positives = 58/333 (17%), Gaps = 68/333 (20%)
Query: 132 VNVVRFSPNGELL-----ASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTK 186
+ +P+ + A + V + + +
Sbjct: 4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGF--------------- 48
Query: 187 ILRGHLEDVYDISWSP----------TSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKF 236
+ + + + + G + ++D +
Sbjct: 49 --------LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP 100
Query: 237 VQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDD 296
V P + +S + ++ VP +
Sbjct: 101 RFLVGTYPWMTSLTPDGKTLLFYQFS-------PAPAVGVVDLEGKAFKRMLDVPDCYHI 153
Query: 297 TMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYS 356
+ DG + + T +TH ++ +
Sbjct: 154 FPTAPDTFFMHCRDGS-------LAKVAFGTEGTPEITHTEVFHPEDEFLI-------NH 199
Query: 357 VAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIA-NIHYTKL 415
A +I + + A A A
Sbjct: 200 PAYSQKAGRLVWPTYTG--------KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW 251
Query: 416 TDITWSSDGKVLIASSTDGYCSIISFGDNEIGI 448
+ + + + +
Sbjct: 252 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 284
Score = 36.3 bits (82), Expect = 0.009
Identities = 19/279 (6%), Positives = 53/279 (18%), Gaps = 34/279 (12%)
Query: 51 HRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLT 110
R +++ + + +P+G+ L +
Sbjct: 75 ERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVV 134
Query: 111 ERESGIANVEF---ASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEF 167
+ E +G L
Sbjct: 135 DLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI----------- 183
Query: 168 PSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNL 227
+ ++S + L+ + D+ G
Sbjct: 184 --------------THTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAK 229
Query: 228 GILTE--HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHEL 285
+ + + W P + + S+ V +
Sbjct: 230 FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT 289
Query: 286 FDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENS 324
+++ + S + S D + L+ + +
Sbjct: 290 GERLAKFEMGHEIDS----INVSQDEKPLLYALSTGDKT 324
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 44.6 bits (104), Expect = 2e-05
Identities = 12/178 (6%), Positives = 43/178 (24%), Gaps = 12/178 (6%)
Query: 56 GKIWYLTERESGIANVEFASD-LSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERES 114
+ + A + + + + G L+ + + + +
Sbjct: 185 ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVAS------SILQGDI 238
Query: 115 GIANVEFASDLSRHQKAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDE 174
A + + ++ F G + + + I+ + N
Sbjct: 239 PAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSS 298
Query: 175 ENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLI--SGSVDNTAIMWDVHKGKNLGIL 230
V + + + D I + + + ++D ++ +
Sbjct: 299 --VTASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353
Score = 37.7 bits (86), Expect = 0.003
Identities = 23/262 (8%), Positives = 49/262 (18%), Gaps = 25/262 (9%)
Query: 201 SPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ-------GVAWDPKNQYVA-TL 252
S + G + ++D + + + + + L
Sbjct: 83 STSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFL 142
Query: 253 SSDRSLRTYSIQSKKVISR----ACRSKLPVDSSHELFDK------VVPLFHDDTMKSFF 302
+ S+ +C P ++ L
Sbjct: 143 FGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIV 202
Query: 303 RRLTFSPDGQLLIAPSGCLENS--DSTRKPISVTHVFT-RACLNKPAVCLPSLQYYSVAV 359
A + I + A + S +
Sbjct: 203 GAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFR 262
Query: 360 KCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDIT 419
+ + D + +A N I+N H + I
Sbjct: 263 SAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDS--DAII 320
Query: 420 WSSDGK--VLIASSTDGYCSII 439
+ DG S+ I
Sbjct: 321 AAQDGASDNYANSAGTEVLDIY 342
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 42.9 bits (99), Expect = 8e-05
Identities = 28/326 (8%), Positives = 65/326 (19%), Gaps = 49/326 (15%)
Query: 142 ELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS 201
+ + + ++V + + +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVIT-------------------IADAGPTPMVPMVA 42
Query: 202 PTSTHL-ISGSVDNTAIMWDVHKGKNLGILTEHK-----KFVQGVAWDPKNQYVATLSSD 255
P + + + + D+ G+ LG + K + G A P + +A S
Sbjct: 43 PGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESP 102
Query: 256 RSL------------RTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFR 303
L Y ++ + + + D
Sbjct: 103 VRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPE 162
Query: 304 RLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLN----------KPAVCLPSLQ 353
T D + + D A P L
Sbjct: 163 AGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLL 222
Query: 354 YYSVAVKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYT 413
+ + + A N + +D + + +
Sbjct: 223 TMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVP--LPH 280
Query: 414 KLTDITWSSDGKVLIASSTDGYCSII 439
+ S+DG + G +
Sbjct: 281 SYYSVNVSTDGSTVWLGGALGDLAAY 306
Score = 42.1 bits (97), Expect = 1e-04
Identities = 6/53 (11%), Positives = 14/53 (26%)
Query: 190 GHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAW 242
Y ++ S + + G +D + G + +A
Sbjct: 277 PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLAS 329
Score = 35.2 bits (79), Expect = 0.021
Identities = 26/290 (8%), Positives = 69/290 (23%), Gaps = 38/290 (13%)
Query: 28 DNCYRIVTGGADSHVFDYLLKIPHRLKTGKIWYLTERESGIANVEFASDLSRHQKAVNVV 87
T + L TG+ + + V+ + +
Sbjct: 44 GGRIAYATVNKSESLVKI------DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLA 97
Query: 88 RFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLASG 147
+ L + +V L + E+ F + + ++ ++ +G L
Sbjct: 98 IYESPVRLELTHFEVQPTRVALYDAETLSRRKAF-----EAPRQITMLAWARDGSKLYGL 152
Query: 148 DDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHL 207
+ ++ + T + S + + + + +
Sbjct: 153 GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPA 212
Query: 208 ISGSVDNTAIMWDVHKGKNLGILTE-HKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSK 266
+ + D+ G+ F A +P + L ++ ++
Sbjct: 213 DPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFG--AYNVLESFDLEKN 270
Query: 267 KVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIA 316
I R + + S + S DG +
Sbjct: 271 ASIKR--------------------VPLPHSYYS----VNVSTDGSTVWL 296
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 42.2 bits (98), Expect = 1e-04
Identities = 27/247 (10%), Positives = 62/247 (25%), Gaps = 35/247 (14%)
Query: 179 KEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQ 238
+E W V + + ++ + D K + ++ V
Sbjct: 8 RESWKVL-VKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VH 65
Query: 239 GVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTM 298
+Y+ + D + + +K+ A ++ +
Sbjct: 66 ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA---EIKIGIEAR-------------- 108
Query: 299 KSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVA 358
S + + IA + P + K V + +
Sbjct: 109 -SVESSKFKGYEDRYTIAGAYW---------PPQFAIMDGETLEPKQIVSTRGMTVDTQT 158
Query: 359 VKCCPVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDI 418
P + + S + P F ++ V +LL + + + L D
Sbjct: 159 YHPEPRVAAIIASHEHPEF------IVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADG 212
Query: 419 TWSSDGK 425
W S +
Sbjct: 213 GWDSSHR 219
Score = 39.2 bits (90), Expect = 0.001
Identities = 20/169 (11%), Positives = 41/169 (24%), Gaps = 12/169 (7%)
Query: 82 KAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNG 141
AV++ R S +G L + + E + +
Sbjct: 62 YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYED 120
Query: 142 ELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWS 201
+G + ++ V+ V V I S
Sbjct: 121 RYTIAGAYWPPQFAIMDGETLEP---------KQIVSTRGMTVDTQTYHPEPRVAAIIAS 171
Query: 202 PTSTHLISGSVDNTAI-MWDVHKGKNLGILT-EHKKFVQGVAWDPKNQY 248
I + + + + NL + + F+ WD ++Y
Sbjct: 172 HEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRY 220
Score = 36.9 bits (84), Expect = 0.007
Identities = 17/127 (13%), Positives = 36/127 (28%), Gaps = 17/127 (13%)
Query: 130 KAVNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILR 189
AV++ R S +G L ++ I + + KI
Sbjct: 62 YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE----------------IKIGI 105
Query: 190 GHLEDVYDISWSPTSTHLISGS-VDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQY 248
+ I+G+ + D + I++ V + P+ +
Sbjct: 106 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV 165
Query: 249 VATLSSD 255
A ++S
Sbjct: 166 AAIIASH 172
Score = 33.0 bits (74), Expect = 0.12
Identities = 18/125 (14%), Positives = 39/125 (31%), Gaps = 26/125 (20%)
Query: 76 DLSRHQKAVNVVRFSPNGELLA-------SGDDVGK-EIWYLTERESG--IANVEFASDL 125
+L ++ P L ++ L ++ + + +DL
Sbjct: 298 ELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADL 357
Query: 126 SRHQKAVNVVRFSPNGE-----LLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKE 180
K V ++ G+ + +D S ++V KT L + V K+
Sbjct: 358 GEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT-----------LKLKAVVKD 406
Query: 181 HWIVT 185
++T
Sbjct: 407 PRLIT 411
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 40.4 bits (93), Expect = 4e-04
Identities = 29/309 (9%), Positives = 66/309 (21%), Gaps = 29/309 (9%)
Query: 132 VNVVRFSPNGELLASGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGH 191
+P+ + + +TD +D ++ IV
Sbjct: 19 GPGFAIAPDRKASVVATTYFSRGSHGTRTD------VVEIIDNTTLDHAGEIVIPAKHAQ 72
Query: 192 LEDVYDISWSPTSTHLI-SGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVA 250
+ + ++ A + + + +++ A
Sbjct: 73 HVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACVLAYPAGDDRFTA 132
Query: 251 TLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPD 310
S ++L + K K + + DK + K L +
Sbjct: 133 LCESGKALTVTLDANGKEA------KRTMSDAFIDVDKDPAFVNASRYKG--DYLFTTYG 184
Query: 311 GQLLIAPSGCLENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKP 370
G + A + + +Q +V K +
Sbjct: 185 GNVRSA------DFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHK 238
Query: 371 SDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGKVLIAS 430
D ++ + + L I S D K L
Sbjct: 239 GTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQKVE--------PLVSIQVSEDDKPLFYG 290
Query: 431 STDGYCSII 439
T ++
Sbjct: 291 LTATSDLVV 299
Score = 33.4 bits (75), Expect = 0.066
Identities = 23/229 (10%), Positives = 51/229 (22%), Gaps = 15/229 (6%)
Query: 219 WDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVI-----SRAC 273
+D K LG + F G A P + ++ S ++ ++ V +
Sbjct: 3 YDADAKKLLGQIDGG--FGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDH 60
Query: 274 RSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLLIAPSGCLENSDSTRKPISV 333
++ + + H +P + + + + V
Sbjct: 61 AGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACV 120
Query: 334 ------THVFTRACLNKPAVCLPSLQYYSV-AVKCCPVLFELKPSDDKPLFKLPYRIVIA 386
FT C + A+ + ++ +
Sbjct: 121 LAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLF 180
Query: 387 VATENNILLYDTQHASPFAFI-ANIHYTKLTDITWSSDGKVLIASSTDG 434
N+ D P ++ W G A
Sbjct: 181 TTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQ 229
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 36.8 bits (83), Expect = 0.006
Identities = 39/306 (12%), Positives = 78/306 (25%), Gaps = 39/306 (12%)
Query: 146 SGDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTST 205
+ + I V +++ VT + + SP T
Sbjct: 7 ANSESDNISVIDVTSNK---------------------VTATIPVG-SNPMGAVISPDGT 44
Query: 206 HL-ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQ 264
+ ++ + N + D + + Q T + +L
Sbjct: 45 KVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTT 104
Query: 265 SKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTFSPDGQLL---IAPSGCL 321
S V K P+ + K + + ++ + +P G
Sbjct: 105 SNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIA 164
Query: 322 ENSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCCPVLFELKPSDDKPLFKLPY 381
D T+ ++ + + ++ + A V E + + K
Sbjct: 165 VTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFN 224
Query: 382 RIVIAVATENNILLYDTQHASPFAFIANIHYTKLTDITWSSDGK-VLIASSTDGYCSIIS 440
+ + N I P I + DGK V +A S S+I
Sbjct: 225 TVSMIDTGTNKITARIPVGPDP------------AGIAVTPDGKKVYVALSFCNTVSVID 272
Query: 441 FGDNEI 446
N I
Sbjct: 273 TATNTI 278
Score = 35.2 bits (79), Expect = 0.019
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Query: 184 VTKILRGHLEDVYDISWSPTSTHL-ISGSVDNTAIMWDVHKGKNLGIL 230
+T + D I+ +P + ++ S NT + D +
Sbjct: 236 ITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282
Score = 35.2 bits (79), Expect = 0.020
Identities = 10/67 (14%), Positives = 18/67 (26%), Gaps = 2/67 (2%)
Query: 208 ISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYV-ATLSSDRSLRTYSIQSK 266
I+ S + + DV K + G P V + + +
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 267 KVISRAC 273
VI+
Sbjct: 65 NVIATVP 71
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 34.0 bits (76), Expect = 0.045
Identities = 25/264 (9%), Positives = 59/264 (22%), Gaps = 19/264 (7%)
Query: 190 GHLEDVYDISWSPTSTHL-ISGSVDNTAIMWDVHKGKNLGILTEHKK---FVQGVAWDPK 245
V + SP +L + + + + + + ++ D +
Sbjct: 34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQ 93
Query: 246 NQYVATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFH--DDTMKSFFR 303
Q+V S + + + + +D H +
Sbjct: 94 GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRIC 153
Query: 304 RLTFSPDGQLLIAPSGCLE-NSDSTRKPISVTHVFTRACLNKPAVCLPSLQYYSVAVKCC 362
T S DG L+ + + + + A +
Sbjct: 154 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI 213
Query: 363 PVLFELKPSDDKPLFKLPYRIVIAVATENNILLYDTQHASPFAFIANIHYTKLT------ 416
+ L + + ++ D + F + + L+
Sbjct: 214 ECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP 273
Query: 417 ------DITWSSDGKVLIASSTDG 434
GK LIA+
Sbjct: 274 TETQPRGFNVDHSGKYLIAAGQKS 297
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 32.2 bits (73), Expect = 0.20
Identities = 24/244 (9%), Positives = 60/244 (24%), Gaps = 53/244 (21%)
Query: 87 VRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS 146
G+ S + L + ++ R G
Sbjct: 181 TDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERI------AAAVKAGNFKTI 234
Query: 147 GDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTH 206
GD + ++ + +++ T+ + +
Sbjct: 235 GDSKVPVVDGRGESE----------------------FTRYIPVPKNPHGLNTSPDGKYF 272
Query: 207 LISGSVDNTAIMWDVHKGKNL--GIL---------TEHKKFVQGVAWDPKNQYVATLSSD 255
+ +G + T + + K +L + E +D + TL D
Sbjct: 273 IANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFID 332
Query: 256 RSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLF---HDDTMKSFFRRLTFSPDGQ 312
+ ++I D + + K+ + H+ + + DG+
Sbjct: 333 SQVCKWNIADAIKHYNG-------DRVNYIRQKLDVQYQPGHNHASLT----ESRDADGK 381
Query: 313 LLIA 316
L+
Sbjct: 382 WLVV 385
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 31.4 bits (69), Expect = 0.29
Identities = 11/68 (16%), Positives = 18/68 (26%), Gaps = 4/68 (5%)
Query: 180 EHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNTAI---MWDVHKGKNLGILTEHKKF 236
+ + S +P T +I S + G+ L
Sbjct: 201 DLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQ 259
Query: 237 VQGVAWDP 244
V+ AW P
Sbjct: 260 VKFPAWSP 267
>d2b5ua2 b.110.1.1 (A:84-315) Colicin E3 N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 232
Score = 29.0 bits (65), Expect = 1.4
Identities = 25/129 (19%), Positives = 42/129 (32%), Gaps = 22/129 (17%)
Query: 500 TDKSSEDTQKISVKNEKGSNSQVVEAV---TSDIKESKDNNTPAEAMEVDPVPPETNAEC 556
D ++ Q ISV + + VV+A + + P + V+ P
Sbjct: 103 VDDVKDERQNISVVSGVPMSCPVVDAKPTERPGVFTASIPGAPVLNISVNNSTPAVQTLS 162
Query: 557 PSTPKTHGGTPNKGGTPSKT----------------PRRVQLITLSSPNR-KRKQDEEKI 599
P G V + + SP++ K++QDEE
Sbjct: 163 PGVTNNTDKDVRPAGFTQGGNTRDAVIRFPKDSGHNAVYVSVSDVLSPDQVKQRQDEENR 222
Query: 600 RETIKENDA 608
R+ +E DA
Sbjct: 223 RQ--QEWDA 229
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 29.3 bits (64), Expect = 1.4
Identities = 24/239 (10%), Positives = 64/239 (26%), Gaps = 20/239 (8%)
Query: 75 SDLSRHQKAVNVVRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNV 134
S ++N SP+G+ + + K+ + I ++ ++ +
Sbjct: 55 STFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN--------KRQLIT 106
Query: 135 VRFSPNGELLASGDDESTIIVWKQ------KTDQDLPEFPSSNLDEENVNKEHWIVTKIL 188
PN + + + K + +LP + + +E++
Sbjct: 107 EERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE 166
Query: 189 RGHLEDVYDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQY 248
+ WSP T L ++T + +
Sbjct: 167 EEVFSAYSALWWSPNGTFLAYAQFNDTEV------PLIEYSFYSDESLQYPKTVRVPYPK 220
Query: 249 VATLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRRLTF 307
++ + S ++ A ++ +S + D + T + +
Sbjct: 221 AGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLR 279
Score = 28.5 bits (62), Expect = 2.9
Identities = 13/114 (11%), Positives = 34/114 (29%), Gaps = 7/114 (6%)
Query: 196 YDISWSPTSTHLISGSVDNTAIMWDVHKGKNLGILT-----EHKKFVQGVAWDPKNQYVA 250
Y + W +L +N ++++ G + L E + + P Q++
Sbjct: 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFIL 77
Query: 251 TLSSDRSLRTYSIQSKKVISRACRSKLPVDSSHELFDKVVPLFHDDTMKSFFRR 304
+ +S + I + +L + + V ++
Sbjct: 78 LEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN 131
Score = 27.8 bits (60), Expect = 5.2
Identities = 18/175 (10%), Positives = 40/175 (22%), Gaps = 7/175 (4%)
Query: 87 VRFSPNGELLASGDDVGKEIWYLTERESGIANVEFASDLSRHQKAVNVVRFSPNGELLAS 146
+R+ + E L ++ S S ++N SP+G+ +
Sbjct: 22 LRWISDHEYLYKQENNILVFNAEYGNSSVFLE---NSTFDEFGHSINDYSISPDGQFILL 78
Query: 147 GDDESTIIVWKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTH 206
+ D+ + L E + + Y +
Sbjct: 79 EYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKI 138
Query: 207 LISGSVDNTAIMWDVHKGKN----LGILTEHKKFVQGVAWDPKNQYVATLSSDRS 257
+ N E + W P ++A + +
Sbjct: 139 EPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDT 193
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 28.2 bits (61), Expect = 3.2
Identities = 27/255 (10%), Positives = 67/255 (26%), Gaps = 50/255 (19%)
Query: 77 LSRHQKAVNVVRFSPNGELLA-----SGDDVGKEIWYLTERESGIANV-EFASDLSRHQK 130
+ + +N RF P+G +A ++++ I + F+ + +
Sbjct: 36 IVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRM 95
Query: 131 AVNVVRFSPNGELLA-----------------------------------SGDDESTIIV 155
+V F P+G L+ D +I
Sbjct: 96 FTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIG 155
Query: 156 WKQKTDQDLPEFPSSNLDEENVNKEHWIVTKILRGHLEDVYDISWSPTSTHLISGSVDNT 215
+ + + KI+ + +
Sbjct: 156 RNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQ 215
Query: 216 AIMWDVHKGKNLGILTEHKKFVQGVAWDPKNQYVATLSSDRSLRTYSIQSKKVISRACRS 275
D+ GK+L T + + + + S S+ ++ ++K+
Sbjct: 216 IYSTDL-DGKDLRKHTSFTDY-YPRHLNTDGRRIL-FSKGGSIYIFNPDTEKI------E 266
Query: 276 KLPVDSSHELFDKVV 290
K+ + D+++
Sbjct: 267 KIEIGDLESPEDRII 281
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66)
{Escherichia coli [TaxId: 562]}
Length = 115
Score = 26.5 bits (58), Expect = 4.5
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 496 KVSPTDKSSEDTQKISVKNEKG 517
V+ +KS+ I VK G
Sbjct: 94 SVTAMEKSTGVEASIQVKPSYG 115
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]}
Length = 118
Score = 26.4 bits (58), Expect = 5.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 496 KVSPTDKSSEDTQKISVKNEKG 517
VS DK+S QKI++K G
Sbjct: 97 HVSAKDKNSGKEQKITIKASSG 118
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.312 0.130 0.383
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,250,210
Number of extensions: 103944
Number of successful extensions: 544
Number of sequences better than 10.0: 1
Number of HSP's gapped: 363
Number of HSP's successfully gapped: 134
Length of query: 621
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 530
Effective length of database: 1,158,166
Effective search space: 613827980
Effective search space used: 613827980
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.3 bits)