BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15553
(489 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VXK6|IF5_DROME Eukaryotic translation initiation factor 5 OS=Drosophila
melanogaster GN=eIF5 PE=1 SV=1
Length = 464
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/451 (56%), Positives = 308/451 (68%), Gaps = 68/451 (15%)
Query: 1 MATVNVNRNVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGC 60
MATVNVNR+VTD FYRYKMP+L AKVEGKGNGIKTV+VNMA+VA+AIGRP TYPTKYFGC
Sbjct: 1 MATVNVNRSVTDIFYRYKMPRLQAKVEGKGNGIKTVLVNMAEVARAIGRPATYPTKYFGC 60
Query: 61 ELGAQTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQ 120
ELGAQT DHKN+RF+VNGSHDV KLQDLLDGFIRKFVLCPECDNPET+L VSAK TI
Sbjct: 61 ELGAQTLFDHKNERFVVNGSHDVNKLQDLLDGFIRKFVLCPECDNPETNLTVSAKNQTIS 120
Query: 121 QVCKACGFHGMLQFNHKLNTFILKNPPNLNPAVQGSSLTEGKRPKRISKKQES------- 173
Q CKACGFHG+L+ NHK+NTFI+KNPP+LNPA QGSSLTEGKR ++ +K ++
Sbjct: 121 QSCKACGFHGLLKVNHKVNTFIVKNPPSLNPAAQGSSLTEGKRSRKQKQKNDNADGSMTN 180
Query: 174 --------------NGDMTKSDEESDPTVVAPEKVADEVNDDDGGWLADVSEEAVRARAL 219
NG S E++ + PEK A + DDD GW DVS+EA+RAR
Sbjct: 181 NSLANNSGGESDGGNGTNQASQTEAEISAAIPEKTAKD--DDDEGWSVDVSKEAIRARLQ 238
Query: 220 DLSSGVKGLTISEDLEKTEKERMDIFYTCVKTALEKNNVD----AKELLSEAERLEVKTK 275
DL+ G KG+TIS+D +KTEKER+DIFY VK +K +D KEL+ EAERL++ K
Sbjct: 239 DLTDGAKGMTISDDYDKTEKERIDIFYELVKDKRDKKQLDDVQTHKELVIEAERLDIINK 298
Query: 276 APLILAELLFADEDKIPIQAKKHRILFFGSNQFTWRSVGFYRRQINTIATLINQCQLILL 335
APL+LAELLF + I +K+R L
Sbjct: 299 APLVLAELLFTEN--IIKDVQKNRPL---------------------------------- 322
Query: 336 DKQSTVLRFTHEDIKAQRYLLNGIEQVIALHKEKLLSMVPGILKLFYDYDILEEKVLLEW 395
+LRFT + KAQRYL+ G+EQ + LHK L+S V GI KLFYD DIL+E V+LEW
Sbjct: 323 -----LLRFTLNNPKAQRYLIGGVEQTVELHKGILMSKVAGIFKLFYDLDILDEAVILEW 377
Query: 396 AEKTSKKYVSKELSAEIRSRAEPFIKWLREA 426
A+K SK++VSK ++AEI +A PF+ WL+ A
Sbjct: 378 AQKVSKRHVSKNIAAEIHEKAMPFVLWLKNA 408
>sp|P59325|IF5_MOUSE Eukaryotic translation initiation factor 5 OS=Mus musculus GN=Eif5
PE=1 SV=1
Length = 429
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/460 (50%), Positives = 305/460 (66%), Gaps = 49/460 (10%)
Query: 3 TVNVNRNVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCEL 62
+VNVNR+V+D FYRYKMP+LIAKVEGKGNGIKTVIVNM DVAKA+ RPPTYPTKYFGCEL
Sbjct: 2 SVNVNRSVSDQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCEL 61
Query: 63 GAQTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV 122
GAQT+ D KNDR+IVNGSH+ KLQD+LDGFI+KFVLCPEC+NPETDL V+ KK TI
Sbjct: 62 GAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNS 121
Query: 123 CKACGFHGMLQFNHKLNTFILKNPPNLNPAVQGSSLTEGKRPKRISKKQESNGDMTKSDE 182
CKACG+ GML +HKL TFILKNPP N + + K+ ++ K+ NG ++ S+
Sbjct: 122 CKACGYRGMLDTHHKLCTFILKNPPE-NSDIGTGKKEKEKKNRKGKDKE--NGSVSTSET 178
Query: 183 ESDPTVVAPEKVADEVNDDDGGWLADVSEEAVRARALDLSSGVKGLTISEDLEKTEKERM 242
P ++D W D +EEA R R ++S KGLT+S+DLE+T +ER+
Sbjct: 179 PPPPPPNEISPPHAVEEEEDDDWGEDTTEEAQRRRMDEISDHAKGLTLSDDLERTVEERV 238
Query: 243 DIFYTCVKTALEKNNVDA--KELLSEAERLEVKTKAPLILAELLFADEDKIPIQAKKHRI 300
+I + VK E+ +D+ KE+++EAERL+VK PL+L E+LF ++KI Q KK+R
Sbjct: 239 NILFDFVKKKKEEGIIDSSDKEIVAEAERLDVKAMGPLVLTEVLF--DEKIREQIKKYRR 296
Query: 301 LFFGSNQFTWRSVGFYRRQINTIATLINQCQLILLDKQSTVLRFTHEDIKAQRYLLNGIE 360
F LRF H + KAQRYLL+G+E
Sbjct: 297 HF---------------------------------------LRFCHNNKKAQRYLLHGLE 317
Query: 361 QVIALHKEKLLSMVPGILKLFYDYDILEEKVLLEWAEKTSKKYVSKELSAEIRSRAEPFI 420
V+A+H+ +L+S +P ILK YD D+LEE+V++ W+EK SKKYVSKEL+ EIR +AEPFI
Sbjct: 318 CVVAMHQAQLISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEPFI 377
Query: 421 KWLREA--EEEDSDSEESDDDLEIEYNDRARVTLQTETIK 458
KWL+EA E + E+ D+++E+ Y+ A V + ET+K
Sbjct: 378 KWLKEAEEESSGGEEEDEDENIEVVYSKTASVP-KVETVK 416
>sp|Q07205|IF5_RAT Eukaryotic translation initiation factor 5 OS=Rattus norvegicus
GN=Eif5 PE=1 SV=1
Length = 429
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 231/460 (50%), Positives = 305/460 (66%), Gaps = 49/460 (10%)
Query: 3 TVNVNRNVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCEL 62
+VNVNR+V+D FYRYKMP+LIAKVEGKGNGIKTVIVNM DVAKA+ RPPTYPTKYFGCEL
Sbjct: 2 SVNVNRSVSDQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCEL 61
Query: 63 GAQTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV 122
GAQT+ D KNDR+IVNGSH+ KLQD+LDGFI+KFVLCPEC+NPETDL V+ KK TI
Sbjct: 62 GAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNS 121
Query: 123 CKACGFHGMLQFNHKLNTFILKNPPNLNPAVQGSSLTEGKRPKRISKKQESNGDMTKSDE 182
CKACG+ GML +HKL TFILKNPP N + + K+ ++ K+ NG ++ S+
Sbjct: 122 CKACGYRGMLDTHHKLCTFILKNPPE-NSDIGTGKKEKEKKNRKGKDKE--NGSVSTSET 178
Query: 183 ESDPTVVAPEKVADEVNDDDGGWLADVSEEAVRARALDLSSGVKGLTISEDLEKTEKERM 242
P ++D W D +EEA R R ++S KGLT+S+DLE+T +ER+
Sbjct: 179 PPPPPPNEISPPHAVEEEEDDDWGEDTTEEAQRRRMDEISDHAKGLTLSDDLERTVEERV 238
Query: 243 DIFYTCVKTALEKNNVDA--KELLSEAERLEVKTKAPLILAELLFADEDKIPIQAKKHRI 300
+I + VK E+ +D+ K++++EAERL+VK PL+L E+LF ++KI Q KK+R
Sbjct: 239 NILFDFVKKKKEEGIIDSSDKDIVAEAERLDVKAMGPLVLTEVLF--DEKIREQIKKYRR 296
Query: 301 LFFGSNQFTWRSVGFYRRQINTIATLINQCQLILLDKQSTVLRFTHEDIKAQRYLLNGIE 360
F LRF H + KAQRYLL+G+E
Sbjct: 297 HF---------------------------------------LRFCHNNKKAQRYLLHGLE 317
Query: 361 QVIALHKEKLLSMVPGILKLFYDYDILEEKVLLEWAEKTSKKYVSKELSAEIRSRAEPFI 420
V+A+H+ +L+S +P ILK YD D+LEE+V++ W+EK SKKYVSKEL+ EIR +AEPFI
Sbjct: 318 CVVAMHQAQLISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEPFI 377
Query: 421 KWLREA--EEEDSDSEESDDDLEIEYNDRARVTLQTETIK 458
KWL+EA E + E+ D+++E+ Y+ A V + ET+K
Sbjct: 378 KWLKEAEEESSGGEEEDEDENIEVVYSKTASVP-KVETVK 416
>sp|P55010|IF5_HUMAN Eukaryotic translation initiation factor 5 OS=Homo sapiens GN=EIF5
PE=1 SV=2
Length = 431
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/462 (50%), Positives = 305/462 (66%), Gaps = 51/462 (11%)
Query: 3 TVNVNRNVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCEL 62
+VNVNR+V+D FYRYKMP+LIAKVEGKGNGIKTVIVNM DVAKA+ RPPTYPTKYFGCEL
Sbjct: 2 SVNVNRSVSDQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCEL 61
Query: 63 GAQTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV 122
GAQT+ D KNDR+IVNGSH+ KLQD+LDGFI+KFVLCPEC+NPETDL V+ KK TI
Sbjct: 62 GAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNS 121
Query: 123 CKACGFHGMLQFNHKLNTFILKNPPNLNPAVQGSSLTEGKRPKRISKKQESNGDMTKSDE 182
CKACG+ GML +HKL TFILKNPP + + G+ E ++ R K +E NG ++ S+
Sbjct: 122 CKACGYRGMLDTHHKLCTFILKNPPENSDS--GTGKKEKEKKNRKGKDKE-NGSVSSSET 178
Query: 183 ESDPTVVAPEKVADEV--NDDDGGWLADVSEEAVRARALDLSSGVKGLTISEDLEKTEKE 240
P ++D W D +EEA R R ++S K LT+S+DLE+T +E
Sbjct: 179 PPPPPPPNEINPPPHTMEEEEDDDWGEDTTEEAQRRRMDEISDHAKVLTLSDDLERTIEE 238
Query: 241 RMDIFYTCVKTALEKNNVDA--KELLSEAERLEVKTKAPLILAELLFADEDKIPIQAKKH 298
R++I + VK E+ +D+ KE+++EAERL+VK PL+L E+LF +KI Q KK+
Sbjct: 239 RVNILFDFVKKKKEEGVIDSSDKEIVAEAERLDVKAMGPLVLTEVLF--NEKIREQIKKY 296
Query: 299 RILFFGSNQFTWRSVGFYRRQINTIATLINQCQLILLDKQSTVLRFTHEDIKAQRYLLNG 358
R F LRF H + KAQRYLL+G
Sbjct: 297 RRHF---------------------------------------LRFCHNNKKAQRYLLHG 317
Query: 359 IEQVIALHKEKLLSMVPGILKLFYDYDILEEKVLLEWAEKTSKKYVSKELSAEIRSRAEP 418
+E V+A+H+ +L+S +P ILK YD D+LEE+V++ W+EK SKKYVSKEL+ EIR +AEP
Sbjct: 318 LECVVAMHQAQLISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEP 377
Query: 419 FIKWLREA--EEEDSDSEESDDDLEIEYNDRARVTLQTETIK 458
FIKWL+EA E + E+ D+++E+ Y+ A V + ET+K
Sbjct: 378 FIKWLKEAEEESSGGEEEDEDENIEVVYSKAASVP-KVETVK 418
>sp|Q5R4L0|IF5_PONAB Eukaryotic translation initiation factor 5 OS=Pongo abelii GN=EIF5
PE=2 SV=1
Length = 431
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/460 (49%), Positives = 300/460 (65%), Gaps = 47/460 (10%)
Query: 3 TVNVNRNVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCEL 62
+VNVNR+V+D FYRYKMP+LIAKVEGKGNGIKTVIVNM DVAKA+ RPPTYPTKYFGCEL
Sbjct: 2 SVNVNRSVSDQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCEL 61
Query: 63 GAQTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV 122
GAQT+ D KNDR+IVNGSH+ KLQD+LDGFI+KFVLCPEC+NPETDL V+ KK TI
Sbjct: 62 GAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHVNPKKQTIGNS 121
Query: 123 CKACGFHGMLQFNHKLNTFILKNPPNLNPAVQGSSLTEGKRPKRISKKQESNGDMTKSDE 182
CKACG+ GML +HKL TFILKNPP N + K+ ++ K+ + +++
Sbjct: 122 CKACGYRGMLDTHHKLCTFILKNPPE-NSDSGTGKKEKEKKNRKGKDKENGSVSSSETPP 180
Query: 183 ESDPTVVAPEKVADEVNDDDGGWLADVSEEAVRARALDLSSGVKGLTISEDLEKTEKERM 242
P ++D W D +EEA R R ++S K LT+S+DLE+T +ER+
Sbjct: 181 PPPPPNEISPPPHTMEEEEDDDWGEDTTEEAQRRRMDEISDHAKVLTLSDDLERTIEERV 240
Query: 243 DIFYTCVKTALEKNNVDA--KELLSEAERLEVKTKAPLILAELLFADEDKIPIQAKKHRI 300
+I + VK E+ +D+ KE+++EAERL+VK PL+L E+LF +KI Q KK+R
Sbjct: 241 NILFDFVKKKKEEGVIDSSDKEIVAEAERLDVKAMGPLVLTEVLF--NEKIREQIKKYRR 298
Query: 301 LFFGSNQFTWRSVGFYRRQINTIATLINQCQLILLDKQSTVLRFTHEDIKAQRYLLNGIE 360
F LRF H + KAQRYLL+G+E
Sbjct: 299 HF---------------------------------------LRFCHNNKKAQRYLLHGLE 319
Query: 361 QVIALHKEKLLSMVPGILKLFYDYDILEEKVLLEWAEKTSKKYVSKELSAEIRSRAEPFI 420
V+A+H+ +L+S +P ILK YD D+LEE+V++ W+EK SKKYVSKEL+ EIR +AEPFI
Sbjct: 320 CVVAMHQAQLISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEPFI 379
Query: 421 KWLREA--EEEDSDSEESDDDLEIEYNDRARVTLQTETIK 458
KWL+EA E + ++ D+++E+ Y+ A V + ET+K
Sbjct: 380 KWLKEAEEESSGGEEDDEDENIEVVYSKTASVP-KVETVK 418
>sp|Q22918|IF5_CAEEL Eukaryotic translation initiation factor 5 OS=Caenorhabditis
elegans GN=C37C3.2 PE=2 SV=2
Length = 436
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/430 (44%), Positives = 245/430 (56%), Gaps = 69/430 (16%)
Query: 3 TVNVNRNVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCEL 62
+NVNR V D FYRYKMPKL AKVEGKGNGIKTVI NM+++AKA+ RPP YPTKYFGCEL
Sbjct: 2 ALNVNRAVADPFYRYKMPKLSAKVEGKGNGIKTVISNMSEIAKALERPPMYPTKYFGCEL 61
Query: 63 GAQTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV 122
GAQT D KN+R+IVNG HD KLQD+LDGFI+KFVLC C+NPET L V +K I+
Sbjct: 62 GAQTNFDAKNERYIVNGEHDANKLQDILDGFIKKFVLCKSCENPETQLFV--RKNNIKSK 119
Query: 123 CKACGFHGMLQFNHKLNTFILKNPPNLNPAVQGSSLTEGKRPKRISKKQESNGDMTKSDE 182
CKACG + HKL+TFI+KNPP ++ SK ++ NG T +
Sbjct: 120 CKACGCSFDIDLKHKLSTFIMKNPPKIDV--------------DFSKAEQKNGKKTSGAD 165
Query: 183 ESDPTVVAPEKVADEVNDD---DGGWLADVSEEAVRARALDLSSGVKGLTISEDLEKTEK 239
+ +D+ + + D W E V + LS+G+ L + +DLEK+E+
Sbjct: 166 AAAAVAADIIHNSDKGSSNDDDDDDW----EPEPVEPNGM-LSAGMGKLVLDKDLEKSEE 220
Query: 240 ERMDIFYTCVKTALEKNNV-DAK---ELLSEAERLEVKTKAPLILAELLFADEDKIP-IQ 294
+R+D+ +T A E++ + DAK L EAERLE+K KA L+LA +F DE I Q
Sbjct: 221 QRLDMLHTFFLKAKEEDRISDAKGQTALRDEAERLELKQKASLLLAN-VFLDEKVITDKQ 279
Query: 295 AKKHRILFFGSNQFTWRSVGFYRRQINTIATLINQCQLILLDKQSTVLRFTHEDIKAQRY 354
KHR L +LRFT D KAQRY
Sbjct: 280 ISKHRNL---------------------------------------LLRFTLNDKKAQRY 300
Query: 355 LLNGIEQVIALHKEKLLSMVPGILKLFYDYDILEEKVLLEWAEKTSKKYVSKELSAEIRS 414
LL G+EQVI H+ +LLS I+K YD D+ EE L+ W EK S KYVSK + +I
Sbjct: 301 LLGGVEQVIHKHEAELLSKSAHIIKSLYDEDVCEEDSLISWGEKPSSKYVSKSFAKKIIE 360
Query: 415 RAEPFIKWLR 424
++P + WL+
Sbjct: 361 NSQPVLNWLK 370
>sp|Q09689|IF5_SCHPO Probable eukaryotic translation initiation factor 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC2F7.05c PE=3 SV=1
Length = 395
Score = 256 bits (655), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 169/434 (38%), Positives = 234/434 (53%), Gaps = 71/434 (16%)
Query: 1 MATVNVNRNVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGC 60
MAT+N+ R+V D+FYRY+MPKL +K+EGKGNGIKTVI NM+D+AKA+GRPP Y TK+FG
Sbjct: 1 MATINIRRDVKDSFYRYRMPKLQSKIEGKGNGIKTVIPNMSDIAKALGRPPLYVTKFFGF 60
Query: 61 ELGAQTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQ 120
ELGAQT + DR+IVNG+HD KLQDLLD FIR+FVLC C NPET+L ++ K TI
Sbjct: 61 ELGAQTTIIADMDRYIVNGAHDAGKLQDLLDVFIRRFVLCASCQNPETELSINKKDQTIS 120
Query: 121 QVCKACGFHGMLQFNHKLNTFILKNPPNLNPAVQGSSLTEGKRPKRISKKQESNGDMTKS 180
CKACG+ G++ HKL I+KNP PA + S + P + + +
Sbjct: 121 YDCKACGYRGVIDGRHKLTGVIVKNP----PAKKKSHKHKRDSPVAEEEDGAEDELTRRI 176
Query: 181 DEESDPTVVAPEKVADEVNDDDGGWLADVSEEAVRARALDLSSGVK-GLTISE---DLEK 236
+E+ A A+ VND+D W D SEEAVRAR +L +K LT+S+ D E+
Sbjct: 177 RQEA-----AELPTAEVVNDED--WAVDTSEEAVRARVQELEGNMKDSLTLSDLRGDEEE 229
Query: 237 TEKERMDIFYTCVKTALEKN-----NVDAKELLSEAERLEVKTKAPLILAELLFADEDKI 291
E R D F LE N +V+ + + E E + K+KA ++L + +
Sbjct: 230 AESSRYDQF----GEWLEDNYPGVSDVEIYKKMKE-ENIHHKSKAIVVLVQCIITS---- 280
Query: 292 PI--QAKKHRILFFGSNQFTWRSVGFYRRQINTIATLINQCQLILLDKQSTVLRFTHEDI 349
P + +KH LF +L DK
Sbjct: 281 PYVGEFEKHGALF---------------------------KKLCTTDKH----------- 302
Query: 350 KAQRYLLNGIEQVIALHKEKLLSMVPGILKLFYDYDILEEKVLLEWAEKTSKKYVSKELS 409
+R LL G E+++ + + +VP +L Y D++ + + +W K SKKYVS+E S
Sbjct: 303 --ERALLGGFERLMENTELVHIDVVPKVLLEIYQNDLVSDDMFEKWGAKASKKYVSRETS 360
Query: 410 AEIRSRAEPFIKWL 423
+I AEPF+ WL
Sbjct: 361 KKIHEAAEPFLTWL 374
>sp|P38431|IF5_YEAST Eukaryotic translation initiation factor 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TIF5 PE=1
SV=1
Length = 405
Score = 229 bits (583), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 155/446 (34%), Positives = 230/446 (51%), Gaps = 80/446 (17%)
Query: 3 TVNVNRNVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCEL 62
++N+ R+ D FYRYKMP + AKVEG+GNGIKT ++N+AD++ A+ RP Y KYFG EL
Sbjct: 2 SINICRDNHDPFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFEL 61
Query: 63 GAQTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV 122
GAQT + DR++VNG H+ KLQD+LDGFI KFVLC C NPET+++++ K + +
Sbjct: 62 GAQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIIT-KDNDLVRD 120
Query: 123 CKACGFHGMLQFNHKLNTFILKNPPNLNPA-------------VQGSSLTEGKRPKRISK 169
CKACG + HKL++FILKNPP+ V+G L+ + S+
Sbjct: 121 CKACGKRTPMDLRHKLSSFILKNPPDSVSGSKKKKKAATASANVRGGGLSISDIAQGKSQ 180
Query: 170 KQESNGDMTKS--------DEESDPTVVAPEKVAD-EVNDDDGGWLADVSEEAVRARALD 220
S+G + + DE S A + D EV DD+ W D+SEEA+RARA +
Sbjct: 181 NAPSDGTGSSTPQHHDEDEDELSRQIKAAASTLEDIEVKDDE--WAVDMSEEAIRARAKE 238
Query: 221 LSSGVKGLTISEDLEKTEKERMDIFYTCVKTALEKNNVDAK-ELLSEAERLEV--KTKAP 277
L + + E E + + +K N+ + EL +A L+V K
Sbjct: 239 LEVNSELTQLDEYGE----------WILEQAGEDKENLPSDVELYKKAAELDVLNDPKIG 288
Query: 278 LILAELLFADEDKIPIQAKKHRILFFGSNQFTWRSVGFYRRQINTIATLINQCQLILLDK 337
+LA+ LF DED I + +H F
Sbjct: 289 CVLAQCLF-DED-IVNEIAEHNAFF----------------------------------- 311
Query: 338 QSTVLRFTHEDIKAQRYLLNGIEQVIALHKEKLLSMVPGILKLFYDYDILEEKVLLEWAE 397
T + T E ++ + GIE+ + L + L+ ++P IL Y+ DI+ E+ ++ +
Sbjct: 312 --TKILVTPE---YEKNFMGGIERFLGLEHKDLIPLLPKILVQLYNNDIISEEEIMRFGT 366
Query: 398 KTSKKYVSKELSAEIRSRAEPFIKWL 423
K+SKK+V KE+S ++R A+PFI WL
Sbjct: 367 KSSKKFVPKEVSKKVRRAAKPFITWL 392
>sp|Q9C8F1|IF5Y_ARATH Probable eukaryotic translation initiation factor 5-1
OS=Arabidopsis thaliana GN=At1g36730 PE=2 SV=1
Length = 439
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 232/470 (49%), Gaps = 67/470 (14%)
Query: 1 MATVNVN-RNVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFG 59
MA N+ N DAFYRYKMP+++ K+EG+GNGIKT +VNM ++AKA+GRP Y TKYFG
Sbjct: 1 MALQNIGASNRDDAFYRYKMPRMMTKIEGRGNGIKTNVVNMVEIAKALGRPAAYTTKYFG 60
Query: 60 CELGAQTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTI 119
CELGAQ+K D KN +VNG+HD KL LL+ FI+K+V C C NPET+++++ K +
Sbjct: 61 CELGAQSKFDEKNGTSLVNGAHDTSKLAGLLENFIKKYVQCYGCGNPETEILIT-KTQML 119
Query: 120 QQVCKACGFHGMLQFNHKLNTFILKNPPNLNPAVQGSSLTEGKRPKRISKKQESNGDM-- 177
Q C ACGF + KL +FILKNPP + + +R+ + + ++ +M
Sbjct: 120 QLKCAACGFLSDVDMRDKLTSFILKNPPEQKKSSKDKKSMRRAEKERLREGEAADEEMRK 179
Query: 178 ---------------------TKSDEESDPTVVAPE--KVADEVNDDDGGWLADVSEEAV 214
+K + S P ++ E + E +DDD W D S EA
Sbjct: 180 LKKEAASKKKAATTGTSKDKVSKKKDHSPPRSLSDENDQADSEEDDDDVQWQTDTSREAA 239
Query: 215 RARALDLSSGVKGLTISEDLEKTEKERMDIFYTCVKTALEK--NNVDAK-------ELLS 265
R + S V + + T +E+ + VK A E+ N ++K +L++
Sbjct: 240 EKRMKEQLSAVTAEMV---MLSTVEEKKPVAE--VKKAPEQVHENGNSKIPENAHEKLVN 294
Query: 266 EAERLEVKTKAPLILAELLFADEDKIPIQAKKHRILFFGSNQFTWRSVGFYRRQINTIAT 325
E + L +P L L ++ +K LF S F GF + I
Sbjct: 295 EIKELLSSGSSPTQLKTALASNSAN---PQEKMDALF--SALFGGTGKGFAKEVIKKKKY 349
Query: 326 LINQCQLILLDKQSTVLRFTHEDIKAQRYLLNGIEQVIALHKEKLLSMVPGILKLFYDYD 385
L+ L+++ +++ AQ LLNGIE + V ++K YD D
Sbjct: 350 LL---ALMMMQEEAGA--------PAQMGLLNGIESFCMKASAEAAKEVALVIKGLYDED 398
Query: 386 ILEEKVLLEWAEKTSKKYVSKELSAEIRSRAEPFIKWLREAEEEDSDSEE 435
IL+E V++EW K K S+ + PFI+WL+ AE S+SEE
Sbjct: 399 ILDEDVIVEWYNKGVK-------SSPVLKNVTPFIEWLQNAE---SESEE 438
>sp|Q26891|IF5_TRICA Eukaryotic translation initiation factor 5 (Fragment) OS=Tribolium
castaneum PE=2 SV=1
Length = 162
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/160 (62%), Positives = 125/160 (78%), Gaps = 2/160 (1%)
Query: 89 LLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACGFHGMLQFNHKLNTFILKNPPN 148
LLDGFIRKFVLCPEC+NPET+L+VS K+ TI Q CKACG+H L+ NHKL TFILKNPPN
Sbjct: 2 LLDGFIRKFVLCPECENPETELLVSTKRSTISQGCKACGYHSPLESNHKLVTFILKNPPN 61
Query: 149 LNPAVQGSSLTEGKRPKRISKKQ-ESNGDMTKSDEESDPTVVAPEKVADEVNDDDGG-WL 206
LNPAVQGSSLTEGKR KR + ++NGD ++ D++++ + + + +DD+G W
Sbjct: 62 LNPAVQGSSLTEGKRSKRSKRPNGDTNGDTSQVDDQNESLEASVNENSKNGDDDEGHEWQ 121
Query: 207 ADVSEEAVRARALDLSSGVKGLTISEDLEKTEKERMDIFY 246
ADVSEEAVRAR DL+ G K +TI++DLEK EK+RMDIFY
Sbjct: 122 ADVSEEAVRARMQDLTEGAKNMTINDDLEKREKDRMDIFY 161
>sp|Q9S825|IF5Z_ARATH Probable eukaryotic translation initiation factor 5-2
OS=Arabidopsis thaliana GN=At1g77840 PE=2 SV=1
Length = 437
Score = 198 bits (504), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 219/463 (47%), Gaps = 71/463 (15%)
Query: 1 MATVNV---NRNVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKY 57
MA N+ NRN DAFYRYKMPK++ K EGKGNGIKT I+N ++AKA+ RPP+Y TKY
Sbjct: 1 MALQNIGASNRN--DAFYRYKMPKMVTKTEGKGNGIKTNIINNVEIAKALARPPSYTTKY 58
Query: 58 FGCELGAQTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKG 117
FGCELGAQ+K D K +VNG+H+ KL LL+ FI+KFV C C NPET+++++ K
Sbjct: 59 FGCELGAQSKFDEKTGTSLVNGAHNTSKLAGLLENFIKKFVQCYGCGNPETEIIIT-KTQ 117
Query: 118 TIQQVCKACGFHGMLQFNHKLNTFILKNPPNLNPAV---------------QGSSLTEGK 162
+ C ACGF + KL FILKNPP +G E +
Sbjct: 118 MVNLKCAACGFISEVDMRDKLTNFILKNPPEQKKVSKDKKAMRKAEKERLKEGELADEEQ 177
Query: 163 RPKRISKKQESNGDMTK------SDEESDPTV--VAPEKVADEVNDDDGGWLADVSEEAV 214
R + KK SNG +K SDE+ P A E DE +DD W D S EA
Sbjct: 178 RKLKAKKKALSNGKDSKTSKNHSSDEDISPKHDENALEVDEDEDDDDGVEWQTDTSREAA 237
Query: 215 RARALDLSSG-------VKGLTISEDLEKTEKERMDIFYTCVKTALEKNNV-DAKELLSE 266
R ++ S + + + E K ++ T EKN V D KE L
Sbjct: 238 EKRMMEQLSAKTAEMVMLSAMEVEEKKAPKSKSNGNVVKTENPPPQEKNLVQDMKEYL-- 295
Query: 267 AERLEVKTKAPLILAELLFADEDKIP--IQAKKHRILFFGSNQFTWRSVGFYRRQINTIA 324
K +P+ + + + P I LF G + + V + + A
Sbjct: 296 ------KKGSPISALKSFISSLSEPPQDIMDALFNALFDGVGKGFAKEVTKKKNYLAAAA 349
Query: 325 TLINQCQLILLDKQSTVLRFTHEDIKAQRYLLNGIEQVIALH-KEKLLSMVPGILKLFYD 383
T+ ED +Q +LLN I + E+ L V +LK YD
Sbjct: 350 TM-------------------QED-GSQMHLLNSIGTFCGKNGNEEALKEVALVLKALYD 389
Query: 384 YDILEEKVLLEWAEKTSKKYVSKELSAEIRSRAEPFIKWLREA 426
DI+EE+V+L+W EK + S+ + +PF++WL+ A
Sbjct: 390 QDIIEEEVVLDWYEKG---LTGADKSSPVWKNVKPFVEWLQSA 429
>sp|P48724|IF5_PHAVU Eukaryotic translation initiation factor 5 OS=Phaseolus vulgaris
GN=EIF5 PE=2 SV=1
Length = 443
Score = 196 bits (497), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 154/479 (32%), Positives = 223/479 (46%), Gaps = 81/479 (16%)
Query: 1 MATVNVNR-NVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFG 59
MA N+ N DAFYRYKMP+++ K+EG+GNGIKT +VNM D+AK + RP +Y TKYFG
Sbjct: 1 MALQNIGAGNSDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKRLARPASYTTKYFG 60
Query: 60 CELGAQTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTI 119
CELGAQ+K D K VNG+H+ KL LL+ FI+K+V C C NPET+++++ K I
Sbjct: 61 CELGAQSKFDEKTGTSHVNGAHETAKLAGLLEIFIKKYVQCYGCGNPETEILIT-KNQMI 119
Query: 120 QQVCKACGFHGMLQFNHKLNTFILKNPPNLNPAVQ------------------------- 154
Q C ACGF + KL TFI+KNPP + +
Sbjct: 120 QLKCAACGFVSDVDMRDKLTTFIVKNPPEVKKGSKDKKAMRRAEKERLKEGEAADEELKK 179
Query: 155 ---------GSSLTEGKRPKRISKKQESNGDMTKSDEESDPTVVAPEKVADEVNDDDG-G 204
SS +G ISKK+ S D + E ++ +DDDG
Sbjct: 180 VKKEVKKKGSSSAKDGTAKSTISKKKGSGSDEDRRSPTHKQIEEKEEAKDEDDDDDDGVQ 239
Query: 205 WLADVSEEAVRARALDLSSGVKGLTISEDLEKTEKERMDIFYTCVKTALEKN----NVDA 260
WL D S +A R R + S V + ++ EK++ K A +N N ++
Sbjct: 240 WLTDTSLDASRQRIKEQLSAVTADMVMLTTDEPEKKK--------KAASNQNGGSQNGNS 291
Query: 261 KELLSEAERLEVKTKAPLILAELLFADEDKIPIQAKKH-----RILFFGSNQFTWRSVGF 315
K + ++ K +ELL + +P+ A++ LF G+ + GF
Sbjct: 292 KNYGTVVAEVKANLKKGFGASELL-SHLAALPVPAQEKMSALVEALFEGTEK------GF 344
Query: 316 YRRQINTIATLINQCQLILLDKQSTVLRFTHEDIKAQRYLLNGIEQVIALHKEKLLSMVP 375
R + K+ + +Q LL+ IE+ L V
Sbjct: 345 GRETL----------------KKKNYFAAAVAEEGSQILLLHAIEEFCCKPNSNALKEVA 388
Query: 376 GILKLFYDYDILEEKVLLEWAEKTSKKYVSKELSAEIRSRAEPFIKWLREAEEEDSDSE 434
+LK YD D+LEE+ ++ W +K K +++I A+PFI WL+ AE E SD E
Sbjct: 389 LVLKTLYDADVLEEEAIVLWYQKGLK---GDNKNSKIWKNAQPFIDWLQNAESE-SDEE 443
>sp|P55876|IF5_MAIZE Eukaryotic translation initiation factor 5 OS=Zea mays GN=EIF5 PE=2
SV=1
Length = 451
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 104/148 (70%), Gaps = 2/148 (1%)
Query: 1 MATVNVN-RNVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFG 59
MA N+ N DAFYRYKMP++I K+EG+GNGIKT +VNM D+AKA+ RP +Y TKYFG
Sbjct: 1 MALQNIGASNRDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFG 60
Query: 60 CELGAQTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTI 119
CELGAQ+K D K +VNG+HD KL LL+ FI+K+V C C NPET++++S K I
Sbjct: 61 CELGAQSKFDEKTGISLVNGAHDTAKLAGLLEVFIKKYVQCYGCGNPETEILIS-KTQMI 119
Query: 120 QQVCKACGFHGMLQFNHKLNTFILKNPP 147
C ACGF + KL TFILKNPP
Sbjct: 120 SLKCAACGFVSDVDMRDKLTTFILKNPP 147
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 348 DIKAQRYLLNGIEQVIALHKEKLLSMVPGILKLFYDYDILEEKVLLEWAEKTSKKYVSKE 407
D AQ L+ IE + L VP +LK YD DIL+E+ +++W V+
Sbjct: 368 DEGAQTLLVQAIEAFGGKCNPEALKEVPVVLKALYDGDILDEETIVDWYNDA----VAAG 423
Query: 408 LSAEIRSRAEPFIKWLREAEEEDSDSEESDDD 439
+++ A+PF++WL+ AE + EE DD+
Sbjct: 424 KDSQVVKNAKPFVEWLQSAESD----EEGDDE 451
>sp|Q54LA1|IF5_DICDI Eukaryotic translation initiation factor 5 OS=Dictyostelium
discoideum GN=eif5 PE=3 SV=1
Length = 393
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 99/147 (67%), Gaps = 4/147 (2%)
Query: 1 MATVNVNRNVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGC 60
MA VN+ R+V D FYRYKM L KVEGKGNGIKTVIVN+ ++A+ + R P Y TK+F
Sbjct: 1 MAQVNIRRDVEDQFYRYKMEVLQGKVEGKGNGIKTVIVNLPNIARDLDRQPEYITKFFEI 60
Query: 61 ELGAQTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQ 120
E A++ ++ N+++ +NG + V +L LD FI KFVLC C NPET V+ KKG I+
Sbjct: 61 EFNAKSNIE--NEKYSINGQYTVERLASALDKFISKFVLCSFCKNPETKFVI--KKGVIE 116
Query: 121 QVCKACGFHGMLQFNHKLNTFILKNPP 147
C ACG G + HKL ++I+KNPP
Sbjct: 117 FKCAACGRVGPIDMKHKLTSYIVKNPP 143
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 355 LLNGIEQVIALHKEKLLSMVPGILKLFYDYDILEEKVLLEWAEKTSKKYVSKELSAEIRS 414
+L G E+ + + E LL + GILK +D IL E+ +L+W + +K V +
Sbjct: 315 ILLGFEE-LCVKDETLLKSIQGILKNLFDAGILTEENILKWYHQKAKSKV-------VIK 366
Query: 415 RAEPFIKWLREA 426
+ FI WL A
Sbjct: 367 ACKDFIAWLETA 378
>sp|Q8TWR5|IF2B_METKA Translation initiation factor 2 subunit beta OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=eif2b PE=3 SV=1
Length = 138
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R++MPK VEGK TVI N +++K + R P + TKYF ELG +D R
Sbjct: 26 RFEMPKPKVSVEGK----TTVIRNFKEISKKLDRDPEHITKYFLKELGTAGHVD--GGRL 79
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
I++G + +++ L ++ +FVLCPEC P+T LV ++ ++ C+ACG
Sbjct: 80 ILHGVYHPKLVEEELKNYVEEFVLCPECGKPDTKLVREDRQWILK--CEACG 129
>sp|A7I5J0|IF2B_METB6 Translation initiation factor 2 subunit beta OS=Methanoregula
boonei (strain 6A8) GN=eif2b PE=3 SV=1
Length = 204
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+ +P+ A VEGK T++ N A++A + R + KY ELG K++ +R
Sbjct: 25 RFVVPEAKAYVEGK----TTILENFAEIADTVRRDKDHLMKYMLGELGTSGKIE--GNRA 78
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACGFH 129
I NG ++ +++ ++ ++ +V+C EC P+T LV + ++ C ACG H
Sbjct: 79 IFNGKFEISQIRMIIKSYVDDYVICSECGKPDTRLVKDDRVLLLR--CDACGGH 130
>sp|A2SSW2|IF2B_METLZ Translation initiation factor 2 subunit beta OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=eif2b
PE=3 SV=1
Length = 204
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 11 TDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDH 70
T+ R+ MPK +EGK TV+ N +D+ ++ R + K+ ELG K+D
Sbjct: 20 TETGERFVMPKAKIYIEGK----TTVLENFSDIVDSLNRDKDHFMKFILGELGTAGKID- 74
Query: 71 KNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
+R + NG + + +L+ ++ +V+C EC P+T LV + + +C+ACG
Sbjct: 75 -GNRAVFNGKFEQAQFDAILETYVGDYVICSECGRPDTKLVKDDR--VLMLLCEACG 128
>sp|O27958|IF2B_ARCFU Translation initiation factor 2 subunit beta OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=eif2b PE=3 SV=1
Length = 137
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+++P++ + EG +T++ N + +AK + R + KY LG +D N R
Sbjct: 26 RFEIPRVSIQREGA----RTILKNFSQIAKTLNRSEDHLYKYIVKSLGTAGFID--NGRL 79
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
++ G +LQ +D ++R +VLC EC++P+T+ + + + C ACG
Sbjct: 80 VLQGKFTESELQKEVDDYVRLYVLCRECNSPDTEFIKEER--VLMLRCLACG 129
>sp|Q6M0H3|IF2B_METMP Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain S2 / LL) GN=eif2b PE=3 SV=1
Length = 138
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+++P + VEG +T+I N D+AK + R P KY ELG T D + R
Sbjct: 27 RFEIPSADSFVEGN----RTIIKNFKDIAKFMERDPQEFAKYVMKELG--TAGDMEGVRL 80
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV-CKACG 127
I+ G + + + ++ ++VLCPEC P+T +V K+G I + C ACG
Sbjct: 81 ILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIV---KEGRIHFLKCTACG 130
>sp|A6VIT7|IF2B_METM7 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=eif2b PE=3
SV=1
Length = 138
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+++P + VEG +T+I N D+AK + R P KY ELG T D + R
Sbjct: 27 RFEIPSADSFVEGN----RTIIKNFKDIAKFMERDPQEFAKYVMKELG--TAGDMEGVRL 80
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV-CKACG 127
I+ G + + + ++ ++VLCPEC P+T +V K+G I + C ACG
Sbjct: 81 ILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIV---KEGRIHFLKCTACG 130
>sp|A9A7T1|IF2B_METM6 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=eif2b PE=3
SV=1
Length = 138
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+++P + VEG +T+I N D+AK + R P KY ELG T D + R
Sbjct: 27 RFEIPSADSFVEGN----RTIIKNFKDIAKFMERDPQEFAKYVMKELG--TAGDMEGVRL 80
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV-CKACG 127
I+ G + + + ++ ++VLCPEC P+T +V K+G I + C ACG
Sbjct: 81 ILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIV---KEGRIHFLKCTACG 130
>sp|A6UX55|IF2B_META3 Translation initiation factor 2 subunit beta OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=eif2b PE=3
SV=1
Length = 139
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+++P + VEG +T++ N D++K I R P + KY ELG T D + R
Sbjct: 28 RFEVPHADSFVEGN----RTMVKNFVDISKVIRREPQFFAKYVLKELG--TAGDVEGPRL 81
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV-CKACG 127
I+ G + + F+ ++VLCPEC P+T ++ K+G I + C ACG
Sbjct: 82 ILQGKFGNYIINSKIKKFVDEYVLCPECGKPDTKII---KEGRIHFLKCMACG 131
>sp|Q2NHD9|IF2B_METST Translation initiation factor 2 subunit beta OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=eif2b PE=3 SV=1
Length = 142
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+K+PK + ++G +T+I N DV++ + R P + KY ELG ++ +R
Sbjct: 31 RFKVPKGYSVIQGN----RTIIKNFGDVSRTLNRDPQHVLKYLLRELGTSGNVE--GNRA 84
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACGFHGMLQ 133
I+ G + D + ++ FV+C EC+ P+T ++ + ++ C ACG L+
Sbjct: 85 ILQGKFTHYVINDRVKEYVDNFVMCHECNRPDTVIIREDRIDMLK--CSACGARAPLK 140
>sp|Q8PWV1|IF2B_METMA Translation initiation factor 2 subunit beta OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=eif2b PE=3 SV=1
Length = 202
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 11 TDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDH 70
TDA + PKL + EGK T++ N ++A + R P + KY ELG K++
Sbjct: 21 TDARFVIPEPKLFS--EGK----TTILDNFGNIADTLNRDPDHLMKYLTRELGTAGKIE- 73
Query: 71 KNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACGFH 129
R + G +L D + ++ ++V+C EC P+T LV + ++ C ACG H
Sbjct: 74 -GTRAVFQGRFTRAQLSDNIQAYVDEYVMCSECGRPDTQLVRVDRVLVLK--CSACGAH 129
>sp|O27797|IF2B_METTH Translation initiation factor 2 subunit beta OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=eif2b PE=1 SV=1
Length = 135
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+++PK + ++G +T I N +VA A+ R P + K+ ELG L+ R
Sbjct: 24 RFEVPKAYSVIQGN----RTFIQNFREVADALNRDPQHLLKFLLRELGTAGNLE--GGRA 77
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
I+ G + + ++ ++ KFV+C EC+ P+T ++ + ++ C+ACG
Sbjct: 78 ILQGKFTHFLINERIEDYVNKFVICHECNRPDTRIIREGRISLLK--CEACG 127
>sp|A5UKI8|IF2B_METS3 Translation initiation factor 2 subunit beta OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=eif2b PE=3
SV=1
Length = 135
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+K+PK + ++G +T I N DVA+ + R P + K+ ELG L+ R
Sbjct: 24 RFKIPKAYSDIQGN----RTFIKNFKDVAEDLNRDPQHVLKFLLRELGTAGNLE--GSRA 77
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
I+ G + + L+ ++ K+V+C EC+ P+T ++ + ++ C ACG
Sbjct: 78 ILQGKFTHYLINERLEDYVEKYVICHECNRPDTKIIREDRIFILK--CAACG 127
>sp|A3CXJ3|IF2B_METMJ Translation initiation factor 2 subunit beta OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=eif2b
PE=3 SV=1
Length = 205
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+ +P A +EGK TV+ N A++A + R + K+ ELG K++ R
Sbjct: 25 RFTVPTARAFIEGK----TTVLENFAEIASTLRREQDHLMKHLLGELGTAGKVE--GTRA 78
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACGFH 129
+ +G + ++ ++ G++ +V+C EC P+T LV + + T++ C ACG H
Sbjct: 79 VFSGKFEQEQINTIIKGYVDDYVICSECGKPDTRLVKTERVLTLK--CDACGGH 130
>sp|Q8TU91|IF2B_METAC Translation initiation factor 2 subunit beta OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=eif2b PE=3 SV=1
Length = 202
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 11 TDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDH 70
TDA + PKL + EGK T++ N ++A + R P + KY ELG K++
Sbjct: 21 TDARFVIPEPKLFS--EGK----TTILDNFGNIADTLNRDPDHLMKYLTRELGTAGKIE- 73
Query: 71 KNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACGFH 129
R + G ++ D + ++ ++V+C EC P+T LV + ++ C ACG H
Sbjct: 74 -GTRAVFQGRFTRAQISDNIQAYVDEYVMCSECGRPDTQLVRVDRVLVLK--CSACGAH 129
>sp|Q74M98|IF2B_NANEQ Translation initiation factor 2 subunit beta OS=Nanoarchaeum
equitans (strain Kin4-M) GN=eif2b PE=3 SV=1
Length = 139
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 34 KTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRFIVNGSHDVVKLQDLLDGF 93
+T+I N +A + R P K+F EL QT ++ + I+N ++ LD F
Sbjct: 40 RTIITNFKQIANYLNRDPKIIAKFFSKELFVQTIIE--GNSLIINKRVSYETIKKKLDEF 97
Query: 94 IRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
I FV+CP C P+T+L+ +K + C ACG
Sbjct: 98 INIFVICPVCKRPDTELIERGRKIYYIK-CHACG 130
>sp|Q5JIT0|IF2B_PYRKO Translation initiation factor 2 subunit beta OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=eif2b PE=3 SV=1
Length = 142
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Query: 9 NVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKL 68
NV R+++P A+V GN +T+I N D+A+A+ R P + K+ E+ L
Sbjct: 24 NVKHHHSRFEVPP--AQVTIAGN--RTIIENFVDIAEAMNRDPNHLLKFILREVATAGTL 79
Query: 69 DHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV-CKACG 127
+ + R I+ G + + + ++++FV+CP C +P+T ++ KKG + C+ACG
Sbjct: 80 EGR--RAILQGRFTPYLIANKMKKYLKEFVICPVCGSPDTKII---KKGRFHFLKCEACG 134
>sp|O58312|IF2B_PYRHO Translation initiation factor 2 subunit beta OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=eif2b PE=3 SV=1
Length = 140
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 9 NVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKL 68
NV R+++P + +EG KT+I N D+A+A+ R P + K+ E+ L
Sbjct: 22 NVKHHKSRFEVPGALVTIEGN----KTIIENFKDIAEALNRDPQHLLKFLLREIATAGTL 77
Query: 69 DHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
+ K R ++ G + + L +I+++V+CP C +P+T ++ + ++ C+ACG
Sbjct: 78 EGK--RVVLQGRFTPYLIANKLKKYIKEYVICPVCGSPDTKIIKRDRFYFLK--CEACG 132
>sp|P09064|IF2B_YEAST Eukaryotic translation initiation factor 2 subunit beta
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SUI3 PE=1 SV=2
Length = 285
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
++++P + +GK KT+ N+ D+A+ + R P + +Y ELG +D + R
Sbjct: 157 KFRIPPPVCLRDGK----KTIFSNIQDIAEKLHRSPEHLIQYLFAELGTSGSVDGQK-RL 211
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
++ G +++++L +I ++V C C + T+L VCK+CG
Sbjct: 212 VIKGKFQSKQMENVLRRYILEYVTCKTCKSINTELKREQSNRLFFMVCKSCG 263
>sp|A6URT3|IF2B_METVS Translation initiation factor 2 subunit beta OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=eif2b
PE=3 SV=1
Length = 138
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+++P + VEG +T+I N D+AK + R K+ ELG T D + +R
Sbjct: 27 RFEIPSADSFVEGN----RTIIKNFKDIAKFMERDTHEFAKFVMKELG--TAGDMEGNRL 80
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV-CKACG 127
I+ G + + + ++ ++VLCPEC P+T ++ K+G I + C ACG
Sbjct: 81 ILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKII---KEGRIHFLKCTACG 130
>sp|A4FZP0|IF2B_METM5 Translation initiation factor 2 subunit beta OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=eif2b PE=3
SV=1
Length = 138
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+++P + VEG +T+I N D+AK + R KY ELG T D + R
Sbjct: 27 RFEIPSADSFVEGN----RTIIKNFKDIAKFMERDAQEFAKYVMKELG--TAGDIEGVRL 80
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV-CKACG 127
I+ G + + + ++ ++VLCPEC P+T +V K+G I + C ACG
Sbjct: 81 ILQGKFGWRMVNEKIQNYVNEYVLCPECGKPDTKIV---KEGRIHFLKCTACG 130
>sp|A3DNI8|IF2B_STAMF Translation initiation factor 2 subunit beta OS=Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eif2b
PE=3 SV=1
Length = 142
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 32 GIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRFIVNGSHDVVKLQDLLD 91
G KT+I+N + I R P +YF ELG ++ ++ + I+ G + L+D
Sbjct: 42 GGKTLILNFKQITDVINRDPKILQRYFVKELGVPAYMN-ESGQLILQGRFSSHVINRLID 100
Query: 92 GFIRKFVLCPECDNPETDLVVSAKKGTIQQV-CKACG 127
F++K+V+CP C + T L+ KKG + + C+ACG
Sbjct: 101 LFVKKYVICPTCGSRFTKLI---KKGKVFILKCEACG 134
>sp|Q9UYR6|IF2B_PYRAB Translation initiation factor 2 subunit beta OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=eif2b PE=3 SV=1
Length = 140
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 9 NVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKL 68
NV R+++P + +EG KT+I N D+A+A+ R P + K+ E+ L
Sbjct: 22 NVKHHKSRFEVPGALVTIEGN----KTIIENFKDIAEALNRDPQHLLKFLLREIATAGTL 77
Query: 69 DHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
+ K R ++ G + + + +I+++V+CP C +P+T ++ + ++ C+ACG
Sbjct: 78 EGK--RVVLQGRFTPYLIANKIKKYIKEYVICPVCGSPDTKIIKRDRFYFLK--CEACG 132
>sp|Q8U3I5|IF2B_PYRFU Translation initiation factor 2 subunit beta OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=eif2b
PE=1 SV=1
Length = 140
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 9 NVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKL 68
NV R+++P + +EG KT+I N D+A A+ R P + K+ E+ L
Sbjct: 22 NVKHHKSRFEVPGALVTIEGN----KTIIENFKDIADALNRDPQHLLKFLLREIATAGTL 77
Query: 69 DHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
+ + R ++ G + + L +I+++V+CP C +P+T ++ + ++ C+ACG
Sbjct: 78 EGR--RVVLQGRFTPYLIANKLKKYIKEYVICPVCGSPDTKIIKRDRFHFLK--CEACG 132
>sp|Q57562|IF2B_METJA Translation initiation factor 2 subunit beta OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=eif2b PE=1 SV=1
Length = 143
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+++P++ +EG +T+I N ++AKA+ R + KY E G+ L+ R
Sbjct: 32 RFELPEIEILIEGN----RTIIRNFRELAKAVNRDEEFFAKYLLKETGSAGNLE--GGRL 85
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV-CKACG 127
I+ L+ ++ F+R++V+C EC P+T ++ K+G + + C ACG
Sbjct: 86 ILQRRISPELLKSRINDFLREYVICRECGKPDTKII---KEGRVHLLKCMACG 135
>sp|C5A2A8|IF2B_THEGJ Translation initiation factor 2 subunit beta OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=eif2b PE=3 SV=1
Length = 142
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 9 NVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKL 68
NV R+++P + + G +T+I N D+A+A+ R P++ K+ E+ L
Sbjct: 24 NVKSHKSRFEVPPAVVTIAGN----RTIIENFVDIAEAMNRDPSHLLKFILREVATAGTL 79
Query: 69 DHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACGF 128
+ + R I+ G + + L +++++V+CP C +P+T ++ + ++ C+ACG
Sbjct: 80 EGR--RVILQGRFTPYLIANKLKKYLKEYVICPVCGSPDTKIIKRDRFYFLK--CEACGA 135
Query: 129 HGMLQ 133
+Q
Sbjct: 136 ETPIQ 140
>sp|A0B5K5|IF2B_METTP Translation initiation factor 2 subunit beta OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=eif2b PE=3 SV=1
Length = 208
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R+++P EGK TV+ N A +A A+ R P + K+ ELG K++ R
Sbjct: 24 RFQIPVPRIFYEGK----TTVLDNFAAIADALNRDPDHLMKFLLQELGTAGKIE--GHRG 77
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACGFH 129
+ G +Q+ + ++ ++V+C EC P+T L+ S + + C ACG H
Sbjct: 78 VFQGKFTEQAIQNQIAAYVDEYVICSECKLPDTHLIKSDR--VLMLKCDACGAH 129
>sp|P56329|IF2B_SCHPO Probable eukaryotic translation initiation factor 2 subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif212 PE=1 SV=2
Length = 321
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 32 GIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRFIVNGSHDVVKLQDLLD 91
G KT+ N++D++K + R + ++ ELG +D + R I+ G +++++L
Sbjct: 206 GKKTIFANISDISKRMHRSLDHVIQFLFAELGTSGSVDGSS-RLIIKGRFQQKQIENVLR 264
Query: 92 GFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
+I ++V C C +P+T +++ + C+ACG
Sbjct: 265 RYIVEYVTCKTCKSPDT--ILTKENRIFFMTCEACG 298
>sp|Q41969|IF2B_ARATH Eukaryotic translation initiation factor 2 subunit beta
OS=Arabidopsis thaliana GN=EMB1401 PE=2 SV=3
Length = 268
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 34 KTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRFIVNGSHDVVKLQDLLDGF 93
KTV VN D+ K + R P + +Y ELG LD + R +V G + +L +
Sbjct: 157 KTVFVNFMDLCKTMHRQPDHVMQYLLAELGTSGSLDGQQ-RLVVKGRFAPKNFEGILRRY 215
Query: 94 IRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
I +V+C C +P+T ++S + C+ CG
Sbjct: 216 ITDYVICLGCKSPDT--ILSKENRLFFLRCEKCG 247
>sp|Q9HKJ3|IF2B_THEAC Translation initiation factor 2 subunit beta OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=eif2b PE=3 SV=1
Length = 209
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 5 NVNRNVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGA 64
NV + T R K+P EGK T+I N D+ I R P + K+ E G
Sbjct: 14 NVLSSSTKNIDRLKIPDPEIIREGKA----TIIRNFQDIVDIINRDPEHIIKFLTREFG- 68
Query: 65 QTKLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCK 124
T + R I+N + +L D ++ +I +V C EC + +T++ S + + VCK
Sbjct: 69 -TNIVQNGRRLIINRKLTLEELLDKMNEYINTYVRCYECGSLDTEIQKSGRISLL--VCK 125
Query: 125 ACG 127
ACG
Sbjct: 126 ACG 128
>sp|Q97B05|IF2B_THEVO Translation initiation factor 2 subunit beta OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 /
NBRC 15438 / GSS1) GN=eif2b PE=3 SV=2
Length = 208
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R K+P+ EGK T+I N D+ I R P K+ ELG T + R
Sbjct: 25 RLKIPEPEIIREGKA----TIIRNFQDIIDIINRDPDQVIKFLTRELG--TNIVQNGRRL 78
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
I+N + +LQ+ ++ +I +V C EC + +T++ S + + VCKACG
Sbjct: 79 IINKKVTLEELQEKMNEYINTYVRCYECGSLDTEIQKSGRVSLL--VCKACG 128
>sp|P41375|IF2B_DROME Eukaryotic translation initiation factor 2 subunit 2 OS=Drosophila
melanogaster GN=eIF-2beta PE=1 SV=1
Length = 312
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 34 KTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRFIVNGSHDVVKLQDLLDGF 93
KT N D+AK + R P + + ELG +D N + I+ G +++++L +
Sbjct: 195 KTSFANFMDIAKTLHRLPKHLLDFLLAELGTSGSMDG-NQQLIIKGRFQPKQIENVLRRY 253
Query: 94 IRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
I+++V C C +PET L + +Q C++CG
Sbjct: 254 IKEYVTCHTCRSPETILQKDTRLFFLQ--CESCG 285
>sp|Q6L0E6|IF2B_PICTO Translation initiation factor 2 subunit beta OS=Picrophilus
torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 /
NBRC 100828) GN=eif2b PE=3 SV=1
Length = 205
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 16 RYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRF 75
R K+P+ EGK T+I N D+ + + R P KY E G L R
Sbjct: 25 RLKIPEPDVIYEGKS----TIIRNFIDITEMMNRDPEDVIKYLTKEFGIGAVLS--GQRL 78
Query: 76 IVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACGFHGMLQFN 135
I+N ++Q ++ ++ +V+C EC +P+T++ + T VCKACG ++ N
Sbjct: 79 IINRKVSEDEIQSKMNEYMATYVICYECKSPDTEIQKIGR--TYLLVCKACGAQHPIRSN 136
Query: 136 HKL 138
++
Sbjct: 137 REI 139
>sp|Q8ZXA6|IF2B_PYRAE Translation initiation factor 2 subunit beta OS=Pyrobaculum
aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM
9630 / NBRC 100827) GN=eif2b PE=3 SV=1
Length = 134
Score = 51.6 bits (122), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 23 IAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKLDHKNDRFIVNGSHD 82
I K+E + KT+I N +AK + R + K+F EL L+ D F ++G
Sbjct: 26 IPKIEVENMPRKTIIPNFGQIAKRLNRDVYFMAKFFQKELAVPGTLE--GDVFTLHGEKS 83
Query: 83 VVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV-CKACG 127
++ + D FIR +V+CP C++ +T+L K+G I + C ACG
Sbjct: 84 PKVVEAVYDRFIRYYVVCPVCNSIDTEL---RKEGRIFIMRCLACG 126
>sp|Q9HQ97|IF2B_HALSA Translation initiation factor 2 subunit beta OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=eif2b PE=3 SV=1
Length = 132
Score = 50.4 bits (119), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 9 NVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKL 68
+VT + R+++P + EG TV N A+ R + K+ E+G +
Sbjct: 16 DVTGSETRFEVPDPNVRKEGN----VTVYENFQATLDALSRTQDHVLKFLQNEVGTSASI 71
Query: 69 DHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
D ++ R + G ++ D LD ++ +V CPEC P+T+L TIQ C+ACG
Sbjct: 72 D-ESGRARLTGEFGQRRVSDTLDAYVETYVTCPECGLPDTNLETDGD--TIQLHCEACG 127
>sp|B0R583|IF2B_HALS3 Translation initiation factor 2 subunit beta OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eif2b
PE=3 SV=1
Length = 132
Score = 50.4 bits (119), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 9 NVTDAFYRYKMPKLIAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQTKL 68
+VT + R+++P + EG TV N A+ R + K+ E+G +
Sbjct: 16 DVTGSETRFEVPDPNVRKEGN----VTVYENFQATLDALSRTQDHVLKFLQNEVGTSASI 71
Query: 69 DHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQVCKACG 127
D ++ R + G ++ D LD ++ +V CPEC P+T+L TIQ C+ACG
Sbjct: 72 D-ESGRARLTGEFGQRRVSDTLDAYVETYVTCPECGLPDTNLETDGD--TIQLHCEACG 127
>sp|B1YCG8|IF2B_PYRNV Translation initiation factor 2 subunit beta OS=Pyrobaculum
neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta)
GN=eif2b PE=3 SV=1
Length = 134
Score = 49.7 bits (117), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 12 DAFYRYKMPKL-----IAKVEGKGNGIKTVIVNMADVAKAIGRPPTYPTKYFGCELGAQT 66
D Y+ PK I K+E + KTVI N +AK + R + K+F EL
Sbjct: 10 DRAYKLVAPKAQRRAEIPKIEVQNMPRKTVIPNFGQIAKRLNRDIYFMAKFFQRELAVPG 69
Query: 67 KLDHKNDRFIVNGSHDVVKLQDLLDGFIRKFVLCPECDNPETDLVVSAKKGTIQQV-CKA 125
++ D F ++G ++ + + FIR +V+CP C++ +T+L ++G I + C A
Sbjct: 70 TVE--GDVFTLHGEKSPKVVEAVYERFIRYYVVCPVCNSIDTEL---RREGRIYVMRCLA 124
Query: 126 CG 127
CG
Sbjct: 125 CG 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,875,037
Number of Sequences: 539616
Number of extensions: 8252854
Number of successful extensions: 48055
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 504
Number of HSP's that attempted gapping in prelim test: 37720
Number of HSP's gapped (non-prelim): 7724
length of query: 489
length of database: 191,569,459
effective HSP length: 122
effective length of query: 367
effective length of database: 125,736,307
effective search space: 46145224669
effective search space used: 46145224669
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)