BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15554
(339 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P17972|KCNAW_DROME Potassium voltage-gated channel protein Shaw OS=Drosophila
melanogaster GN=Shaw PE=2 SV=1
Length = 498
Score = 231 bits (590), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 161/211 (76%), Gaps = 15/211 (7%)
Query: 8 LYTLFDRIIKGYDVYKVETIGDAYMVILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSS 67
+++LFD + Y +TIG V SVFFIC+S++SF LKTHPDMRVP +RN +
Sbjct: 160 IWSLFD---EPYSSNAAKTIG--------VVSVFFICISILSFCLKTHPDMRVPIVRNIT 208
Query: 68 FFISLDNSTAWVLHKEKTDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVI 127
+ + S W L K +T+ H AFFY+E CNAWFTFE+LVR + SPN ++FI+S VN+I
Sbjct: 209 V-KTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTFEILVRFISSPNKWEFIKSSVNII 267
Query: 128 DIIATLSFYTDILLQ---DKVQQSDILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAK 184
D IATLSFY D++LQ ++ +DILEFFSIIRI+RLFKLTRHS GLKILI TF+ASAK
Sbjct: 268 DYIATLSFYIDLVLQRFASHLENADILEFFSIIRIMRLFKLTRHSSGLKILIQTFRASAK 327
Query: 185 ELTLLVFFLVLGIVVFASLVYYAERLQVSPN 215
ELTLLVFFLVLGIV+FASLVYYAER+Q +P+
Sbjct: 328 ELTLLVFFLVLGIVIFASLVYYAERIQPNPH 358
Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/106 (73%), Positives = 91/106 (85%), Gaps = 3/106 (2%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQ---DKVQQSDILEFFSIIRILRLFKL 265
R SPN ++FI+S VN+ID IATLSFY D++LQ ++ +DILEFFSIIRI+RLFKL
Sbjct: 249 RFISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQRFASHLENADILEFFSIIRIMRLFKL 308
Query: 266 TRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERLQ 311
TRHS GLKILI TF+ASAKELTLLVFFLVLGIV+FASLVYYAER+Q
Sbjct: 309 TRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQ 354
>sp|G5EFC3|KCNAG_CAEEL Potassium voltage-gated channel protein egl-36 OS=Caenorhabditis
elegans GN=egl-36 PE=1 SV=1
Length = 558
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 142/211 (67%), Gaps = 8/211 (3%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWV-LHKEKTDPHAAFF 92
++A SV FI +S+ SF LKTH R+P + + I++ + + T+P F
Sbjct: 205 LIAGISVLFIFISIFSFCLKTHQSFRLPVLIGQN--ITMPGGVVQPSIERVSTEPLPIFG 262
Query: 93 YVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DI 150
+E+ CN WFT EL++R V P+ +F +SP+N+ID++ATLSFY D ++ V+ D+
Sbjct: 263 QIEMLCNIWFTLELIIRFVFCPSKIRFFKSPLNMIDLVATLSFYADAMMVRVVEDEPKDV 322
Query: 151 LEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERL 210
+EF S+IRI RLFKLT+H GL+ILIHTF+ASAKEL LLVFFL+LGIV+FA+LVYYAE++
Sbjct: 323 VEFLSMIRIFRLFKLTQHHQGLQILIHTFRASAKELILLVFFLILGIVIFAALVYYAEKM 382
Query: 211 QVSPNIFQFIRSPVNVIDIIATLS--FYTDI 239
+ +PN QF P+ + I T++ Y D+
Sbjct: 383 EANPN-NQFQSIPLGLWWAICTMTTVGYGDM 412
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 83/100 (83%), Gaps = 2/100 (2%)
Query: 214 PNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DILEFFSIIRILRLFKLTRHSPG 271
P+ +F +SP+N+ID++ATLSFY D ++ V+ D++EF S+IRI RLFKLT+H G
Sbjct: 284 PSKIRFFKSPLNMIDLVATLSFYADAMMVRVVEDEPKDVVEFLSMIRIFRLFKLTQHHQG 343
Query: 272 LKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERLQ 311
L+ILIHTF+ASAKEL LLVFFL+LGIV+FA+LVYYAE+++
Sbjct: 344 LQILIHTFRASAKELILLVFFLILGIVIFAALVYYAEKME 383
>sp|Q14B80|KCNC2_MOUSE Potassium voltage-gated channel subfamily C member 2 OS=Mus
musculus GN=Kcnc2 PE=1 SV=1
Length = 642
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 120/187 (64%), Gaps = 12/187 (6%)
Query: 35 LAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKE-KTDPHAAFFY 93
+A S+FFI VS+ +F L+TH + ++N + + N T+ VL E +TDP A Y
Sbjct: 235 IAFASLFFILVSITTFCLETHEAFNI--VKNKTEPVI--NGTSPVLQYEIETDP--ALTY 288
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DIL 151
VE C WFTFE LVR V SPN +FI++ +N+ID +A L FY ++ L ++ D+L
Sbjct: 289 VEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVL 348
Query: 152 EFFSIIR---ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 208
F ++R ILR+FKLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAE
Sbjct: 349 GFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAE 408
Query: 209 RLQVSPN 215
R+ PN
Sbjct: 409 RVGAQPN 415
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 74/107 (69%), Gaps = 5/107 (4%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DILEFFSIIR---ILRLF 263
R+ SPN +FI++ +N+ID +A L FY ++ L ++ D+L F ++R ILR+F
Sbjct: 304 RIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIF 363
Query: 264 KLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERL 310
KLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAER+
Sbjct: 364 KLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERV 410
>sp|P22462|KCNC2_RAT Potassium voltage-gated channel subfamily C member 2 OS=Rattus
norvegicus GN=Kcnc2 PE=1 SV=1
Length = 638
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 120/187 (64%), Gaps = 12/187 (6%)
Query: 35 LAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKE-KTDPHAAFFY 93
+A S+FFI VS+ +F L+TH + ++N + + N T+ VL E +TDP A Y
Sbjct: 231 IAFASLFFILVSITTFCLETHEAFNI--VKNKTEPVI--NGTSAVLQYEIETDP--ALTY 284
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DIL 151
VE C WFTFE LVR V SPN +FI++ +N+ID +A L FY ++ L ++ D+L
Sbjct: 285 VEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVL 344
Query: 152 EFFSIIR---ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 208
F ++R ILR+FKLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAE
Sbjct: 345 GFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAE 404
Query: 209 RLQVSPN 215
R+ PN
Sbjct: 405 RVGAQPN 411
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 74/107 (69%), Gaps = 5/107 (4%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DILEFFSIIR---ILRLF 263
R+ SPN +FI++ +N+ID +A L FY ++ L ++ D+L F ++R ILR+F
Sbjct: 300 RIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIF 359
Query: 264 KLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERL 310
KLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAER+
Sbjct: 360 KLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERV 406
>sp|Q96PR1|KCNC2_HUMAN Potassium voltage-gated channel subfamily C member 2 OS=Homo
sapiens GN=KCNC2 PE=1 SV=1
Length = 638
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 120/187 (64%), Gaps = 12/187 (6%)
Query: 35 LAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKE-KTDPHAAFFY 93
+A S+FFI VS+ +F L+TH + ++N + + N T+ VL E +TDP A Y
Sbjct: 231 IAFASLFFILVSITTFCLETHEAFNI--VKNKTEPVI--NGTSVVLQYEIETDP--ALTY 284
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DIL 151
VE C WFTFE LVR V SPN +FI++ +N+ID +A L FY ++ L ++ D+L
Sbjct: 285 VEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVL 344
Query: 152 EFFSIIR---ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 208
F ++R ILR+FKLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAE
Sbjct: 345 GFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAE 404
Query: 209 RLQVSPN 215
R+ PN
Sbjct: 405 RVGAQPN 411
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 74/107 (69%), Gaps = 5/107 (4%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DILEFFSIIR---ILRLF 263
R+ SPN +FI++ +N+ID +A L FY ++ L ++ D+L F ++R ILR+F
Sbjct: 300 RIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIF 359
Query: 264 KLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERL 310
KLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAER+
Sbjct: 360 KLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERV 406
>sp|P15388|KCNC1_MOUSE Potassium voltage-gated channel subfamily C member 1 OS=Mus
musculus GN=Kcnc1 PE=2 SV=1
Length = 511
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 116/190 (61%), Gaps = 8/190 (4%)
Query: 31 YMVILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAA 90
Y +A S+FFI VS+ +F L+TH R I N + ++ N T V + + + A
Sbjct: 188 YARYVAFASLFFILVSITTFCLETH--ERFNPIVNKTEIENVRNGTQ-VRYYREAETEAF 244
Query: 91 FFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS-- 148
Y+E C WFTFE L+R V PN +FI++ +N+ID +A L FY ++ L ++
Sbjct: 245 LTYIEGVCVVWFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAK 304
Query: 149 DILEFFSIIR---ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVY 205
D+L F ++R ILR+FKLTRH GL++L HT +AS E LL+ FL LG+++FA+++Y
Sbjct: 305 DVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIY 364
Query: 206 YAERLQVSPN 215
YAER+ PN
Sbjct: 365 YAERIGAQPN 374
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DILEFFSIIR---ILRLF 263
R+ PN +FI++ +N+ID +A L FY ++ L ++ D+L F ++R ILR+F
Sbjct: 263 RVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIF 322
Query: 264 KLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERL 310
KLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAER+
Sbjct: 323 KLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERI 369
>sp|P48547|KCNC1_HUMAN Potassium voltage-gated channel subfamily C member 1 OS=Homo
sapiens GN=KCNC1 PE=2 SV=1
Length = 511
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 116/190 (61%), Gaps = 8/190 (4%)
Query: 31 YMVILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAA 90
Y +A S+FFI VS+ +F L+TH R I N + ++ N T V + + + A
Sbjct: 188 YARYVAFASLFFILVSITTFCLETH--ERFNPIVNKTEIENVRNGTQ-VRYYREAETEAF 244
Query: 91 FFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS-- 148
Y+E C WFTFE L+R + PN +FI++ +N+ID +A L FY ++ L ++
Sbjct: 245 LTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAK 304
Query: 149 DILEFFSIIR---ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVY 205
D+L F ++R ILR+FKLTRH GL++L HT +AS E LL+ FL LG+++FA+++Y
Sbjct: 305 DVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIY 364
Query: 206 YAERLQVSPN 215
YAER+ PN
Sbjct: 365 YAERIGAQPN 374
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DILEFFSIIR---ILRLF 263
R+ PN +FI++ +N+ID +A L FY ++ L ++ D+L F ++R ILR+F
Sbjct: 263 RVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIF 322
Query: 264 KLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERL 310
KLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAER+
Sbjct: 323 KLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERI 369
>sp|P25122|KCNC1_RAT Potassium voltage-gated channel subfamily C member 1 OS=Rattus
norvegicus GN=Kcnc1 PE=2 SV=1
Length = 585
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 116/190 (61%), Gaps = 8/190 (4%)
Query: 31 YMVILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAA 90
Y +A S+FFI VS+ +F L+TH R I N + ++ N T V + + + A
Sbjct: 188 YARYVAFASLFFILVSITTFCLETH--ERFNPIVNKTEIENVRNGTQ-VRYYREAETEAF 244
Query: 91 FFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS-- 148
Y+E C WFTFE L+R V PN +FI++ +N+ID +A L FY ++ L ++
Sbjct: 245 LTYIEGVCVVWFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAK 304
Query: 149 DILEFFSIIR---ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVY 205
D+L F ++R ILR+FKLTRH GL++L HT +AS E LL+ FL LG+++FA+++Y
Sbjct: 305 DVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIY 364
Query: 206 YAERLQVSPN 215
YAER+ PN
Sbjct: 365 YAERIGAQPN 374
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DILEFFSIIR---ILRLF 263
R+ PN +FI++ +N+ID +A L FY ++ L ++ D+L F ++R ILR+F
Sbjct: 263 RVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIF 322
Query: 264 KLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERL 310
KLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAER+
Sbjct: 323 KLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERI 369
>sp|P16390|KCNA3_MOUSE Potassium voltage-gated channel subfamily A member 3 OS=Mus
musculus GN=Kcna3 PE=2 SV=3
Length = 528
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 114/198 (57%), Gaps = 19/198 (9%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHPDMR----VPTIRNSSFFISLDNSTAWVL 80
E+ G A + A+ SV I +S+V F L+T P+ R P + F + +NST+
Sbjct: 181 ESSGPARGI--AIVSVLVILISIVIFCLETLPEFRDEKDYPASPSQDVFEAANNSTSGAP 238
Query: 81 HKEKT--DPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTD 138
+ DP FF VE C WF+FELLVR P+ F R+ +N+IDI+A + ++
Sbjct: 239 SGASSFSDP---FFVVETLCIIWFSFELLVRFFACPSKATFSRNIMNLIDIVAIIPYFIT 295
Query: 139 ILL-----QDKVQQS---DILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLV 190
+ Q QQ+ IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL+
Sbjct: 296 LGTELAERQGNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLI 355
Query: 191 FFLVLGIVVFASLVYYAE 208
FFL +G+++F+S VY+AE
Sbjct: 356 FFLFIGVILFSSAVYFAE 373
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 68/108 (62%), Gaps = 8/108 (7%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILL-----QDKVQQS---DILEFFSIIRIL 260
R P+ F R+ +N+IDI+A + ++ + Q QQ+ IL ++R+
Sbjct: 266 RFFACPSKATFSRNIMNLIDIVAIIPYFITLGTELAERQGNGQQAMSLAILRVIRLVRVF 325
Query: 261 RLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 326 RIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 373
>sp|Q03721|KCNC4_HUMAN Potassium voltage-gated channel subfamily C member 4 OS=Homo
sapiens GN=KCNC4 PE=1 SV=2
Length = 635
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 116/188 (61%), Gaps = 10/188 (5%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKE-KTDPHAAFF 92
++A S+FFI VS+ +F L+TH + RN + + + N T+ +E +T+P
Sbjct: 227 VVAFASLFFILVSITTFCLETHEAFNI--DRNVTEILRVGNITSVHFRREVETEP--ILT 282
Query: 93 YVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DI 150
Y+E C WFT E LVR V P+ F+++ +N+ID +A L FY ++ L ++ D+
Sbjct: 283 YIEGVCVLWFTLEFLVRIVCCPDTLDFVKNLLNIIDFVAILPFYLEVGLSGLSSKAARDV 342
Query: 151 LEFFSIIR---ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYA 207
L F ++R ILR+FKLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYA
Sbjct: 343 LGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYA 402
Query: 208 ERLQVSPN 215
ER+ P+
Sbjct: 403 ERIGARPS 410
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DILEFFSIIR---ILRLF 263
R+ P+ F+++ +N+ID +A L FY ++ L ++ D+L F ++R ILR+F
Sbjct: 299 RIVCCPDTLDFVKNLLNIIDFVAILPFYLEVGLSGLSSKAARDVLGFLRVVRFVRILRIF 358
Query: 264 KLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERL 310
KLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAER+
Sbjct: 359 KLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERI 405
>sp|Q8R1C0|KCNC4_MOUSE Potassium voltage-gated channel subfamily C member 4 OS=Mus
musculus GN=Kcnc4 PE=2 SV=1
Length = 628
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 115/188 (61%), Gaps = 10/188 (5%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKE-KTDPHAAFF 92
++A S+FFI VS+ +F L+TH + RN + + N T+ +E +T+P
Sbjct: 231 VVAFASLFFILVSITTFCLETHEAFNI--DRNVTEIHRVGNITSVRFRREVETEP--ILT 286
Query: 93 YVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DI 150
Y+E C WFT E LVR V P+ F+++ +N+ID +A L FY ++ L ++ D+
Sbjct: 287 YIEGVCVMWFTLEFLVRIVCCPDTLDFVKNLLNIIDFVAILPFYLEVGLSGLSSKAARDV 346
Query: 151 LEFFSIIR---ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYA 207
L F ++R ILR+FKLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYA
Sbjct: 347 LGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYA 406
Query: 208 ERLQVSPN 215
ER+ P+
Sbjct: 407 ERIGARPS 414
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DILEFFSIIR---ILRLF 263
R+ P+ F+++ +N+ID +A L FY ++ L ++ D+L F ++R ILR+F
Sbjct: 303 RIVCCPDTLDFVKNLLNIIDFVAILPFYLEVGLSGLSSKAARDVLGFLRVVRFVRILRIF 362
Query: 264 KLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERL 310
KLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAER+
Sbjct: 363 KLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERI 409
>sp|Q63734|KCNC4_RAT Potassium voltage-gated channel subfamily C member 4 OS=Rattus
norvegicus GN=Kcnc4 PE=1 SV=1
Length = 625
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 115/188 (61%), Gaps = 10/188 (5%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKE-KTDPHAAFF 92
++A S+FFI VS+ +F L+TH + RN + + N T+ +E +T+P
Sbjct: 228 VVAFASLFFILVSITTFCLETHEAFNI--DRNVTEIHRVGNITSVRFRREVETEP--ILT 283
Query: 93 YVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DI 150
Y+E C WFT E LVR V P+ F+++ +N+ID +A L FY ++ L ++ D+
Sbjct: 284 YIEGVCVMWFTLEFLVRIVCCPDTLDFVKNLLNIIDFVAILPFYLEVGLSGLSSKAARDV 343
Query: 151 LEFFSIIR---ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYA 207
L F ++R ILR+FKLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYA
Sbjct: 344 LGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYA 403
Query: 208 ERLQVSPN 215
ER+ P+
Sbjct: 404 ERIGARPS 411
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DILEFFSIIR---ILRLF 263
R+ P+ F+++ +N+ID +A L FY ++ L ++ D+L F ++R ILR+F
Sbjct: 300 RIVCCPDTLDFVKNLLNIIDFVAILPFYLEVGLSGLSSKAARDVLGFLRVVRFVRILRIF 359
Query: 264 KLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERL 310
KLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAER+
Sbjct: 360 KLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERI 406
>sp|Q95167|KCNB2_CANFA Potassium voltage-gated channel subfamily B member 2 (Fragment)
OS=Canis familiaris GN=KCNB2 PE=2 SV=2
Length = 809
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 25/183 (13%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAAFFY 93
ILA+ S FI +S ++ +L T P+++ F DN P A +
Sbjct: 194 ILAIVSNLFIVLSTIALSLNTLPELQ----EMDEFGQPNDN------------PQLA--H 235
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ------ 147
VE CNAWFT E L+R + SPN ++F + P+NVID++A L +Y I L + +
Sbjct: 236 VEAVCNAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQN 295
Query: 148 -SDILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYY 206
+++ F I+RILR+ KL RHS GL+ L T + S EL LL+ FL +GI++F+SLV++
Sbjct: 296 VRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFF 355
Query: 207 AER 209
AE+
Sbjct: 356 AEK 358
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 68/104 (65%), Gaps = 7/104 (6%)
Query: 213 SPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ-------SDILEFFSIIRILRLFKL 265
SPN ++F + P+NVID++A L +Y I L + + +++ F I+RILR+ KL
Sbjct: 255 SPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKL 314
Query: 266 TRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAER 309
RHS GL+ L T + S EL LL+ FL +GI++F+SLV++AE+
Sbjct: 315 ARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEK 358
>sp|Q63099|KCNB2_RAT Potassium voltage-gated channel subfamily B member 2 OS=Rattus
norvegicus GN=Kcnb2 PE=2 SV=2
Length = 907
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 25/183 (13%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAAFFY 93
ILA+ S+ FI +S ++ +L T P+++ N F DN +
Sbjct: 194 ILAIVSILFIVLSTIALSLNTLPELQ----ENDEFGQPSDNR--------------KLAH 235
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ------ 147
VE C AWFT E L+R + SPN ++F + P+NVID++A L +Y I L + +
Sbjct: 236 VEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQN 295
Query: 148 -SDILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYY 206
+++ F I+RILR+ KL RHS GL+ L T + S EL LL+ FL +GI++F+SLV++
Sbjct: 296 VRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFF 355
Query: 207 AER 209
AE+
Sbjct: 356 AEK 358
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 68/104 (65%), Gaps = 7/104 (6%)
Query: 213 SPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ-------SDILEFFSIIRILRLFKL 265
SPN ++F + P+NVID++A L +Y I L + + +++ F I+RILR+ KL
Sbjct: 255 SPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKL 314
Query: 266 TRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAER 309
RHS GL+ L T + S EL LL+ FL +GI++F+SLV++AE+
Sbjct: 315 ARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEK 358
>sp|P16388|KCNA1_MOUSE Potassium voltage-gated channel subfamily A member 1 OS=Mus
musculus GN=Kcna1 PE=2 SV=1
Length = 495
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 116/198 (58%), Gaps = 24/198 (12%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFIS----LDNSTAWVL 80
E+ G A ++A+ SV I +S+V F L+T +P +++ F +DN+T
Sbjct: 161 ESSGPAR--VIAIVSVMVILISIVIFCLET-----LPELKDDKDFTGTIHRIDNTTVIYT 213
Query: 81 HKEKTDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFY---- 136
TDP FF VE C WF+FEL+VR P+ F ++ +N IDI+A + ++
Sbjct: 214 SNIFTDP---FFIVETLCIIWFSFELVVRFFACPSKTDFFKNIMNFIDIVAIIPYFITLG 270
Query: 137 TDILLQDKVQQSD------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLV 190
T+I Q+ Q+ + IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL+
Sbjct: 271 TEIAEQEGNQKGEQATSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLI 330
Query: 191 FFLVLGIVVFASLVYYAE 208
FFL +G+++F+S VY+AE
Sbjct: 331 FFLFIGVILFSSAVYFAE 348
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 70/110 (63%), Gaps = 10/110 (9%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFY----TDILLQDKVQQSD------ILEFFSIIR 258
R P+ F ++ +N IDI+A + ++ T+I Q+ Q+ + IL ++R
Sbjct: 239 RFFACPSKTDFFKNIMNFIDIVAIIPYFITLGTEIAEQEGNQKGEQATSLAILRVIRLVR 298
Query: 259 ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
+ R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 299 VFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 348
>sp|P10499|KCNA1_RAT Potassium voltage-gated channel subfamily A member 1 OS=Rattus
norvegicus GN=Kcna1 PE=1 SV=1
Length = 495
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 116/198 (58%), Gaps = 24/198 (12%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFIS----LDNSTAWVL 80
E+ G A ++A+ SV I +S+V F L+T +P +++ F +DN+T
Sbjct: 161 ESSGPAR--VIAIVSVMVILISIVIFCLET-----LPELKDDKDFTGTIHRIDNTTVIYT 213
Query: 81 HKEKTDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFY---- 136
TDP FF VE C WF+FEL+VR P+ F ++ +N IDI+A + ++
Sbjct: 214 SNIFTDP---FFIVETLCIIWFSFELVVRFFACPSKTDFFKNIMNFIDIVAIIPYFITLG 270
Query: 137 TDILLQDKVQQSD------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLV 190
T+I Q+ Q+ + IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL+
Sbjct: 271 TEIAEQEGNQKGEQATSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLI 330
Query: 191 FFLVLGIVVFASLVYYAE 208
FFL +G+++F+S VY+AE
Sbjct: 331 FFLFIGVILFSSAVYFAE 348
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 70/110 (63%), Gaps = 10/110 (9%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFY----TDILLQDKVQQSD------ILEFFSIIR 258
R P+ F ++ +N IDI+A + ++ T+I Q+ Q+ + IL ++R
Sbjct: 239 RFFACPSKTDFFKNIMNFIDIVAIIPYFITLGTEIAEQEGNQKGEQATSLAILRVIRLVR 298
Query: 259 ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
+ R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 299 VFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 348
>sp|A6H8H5|KCNB2_MOUSE Potassium voltage-gated channel subfamily B member 2 OS=Mus
musculus GN=Kcnb2 PE=2 SV=2
Length = 907
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 25/183 (13%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAAFFY 93
ILA+ S+ FI +S ++ +L T P+++ N F DN +
Sbjct: 194 ILAIVSILFIVLSTIALSLNTLPELQ----ENDEFGQPSDNR--------------KLAH 235
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ------ 147
VE C AWFT E L+R + SPN ++F + P+NVID++A L +Y I L + +
Sbjct: 236 VEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQN 295
Query: 148 -SDILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYY 206
+++ F I+RILR+ KL RHS GL+ L T + S EL LL+ FL +GI++F+SLV++
Sbjct: 296 VRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFF 355
Query: 207 AER 209
AE+
Sbjct: 356 AEK 358
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 68/104 (65%), Gaps = 7/104 (6%)
Query: 213 SPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ-------SDILEFFSIIRILRLFKL 265
SPN ++F + P+NVID++A L +Y I L + + +++ F I+RILR+ KL
Sbjct: 255 SPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKL 314
Query: 266 TRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAER 309
RHS GL+ L T + S EL LL+ FL +GI++F+SLV++AE+
Sbjct: 315 ARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEK 358
>sp|Q7T199|KCA10_CHICK Potassium voltage-gated channel subfamily A member 10 OS=Gallus
gallus GN=KCNA10 PE=2 SV=1
Length = 516
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 104/169 (61%), Gaps = 14/169 (8%)
Query: 50 FALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAAFFYVELACNAWFTFELLVR 109
F ++T P+ R S+ +S + + + H TDP FF +E AC WF+FEL VR
Sbjct: 238 FCMETLPEFREEREYKSTQELSKNTTDTLLAHSTFTDP---FFVIETACIIWFSFELFVR 294
Query: 110 AVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQSD----------ILEFFSIIRI 159
+V P+ +F ++ +N+IDI++ + ++ L + +QQS+ IL ++R+
Sbjct: 295 FIVCPSKTEFFKNIMNIIDIVSIIPYFV-TLTTELIQQSELNGQQNMSLAILRIIRLVRV 353
Query: 160 LRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 208
R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 354 FRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 402
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 72/110 (65%), Gaps = 11/110 (10%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQSD----------ILEFFSIIR 258
R V P+ +F ++ +N+IDI++ + ++ L + +QQS+ IL ++R
Sbjct: 294 RFIVCPSKTEFFKNIMNIIDIVSIIPYFV-TLTTELIQQSELNGQQNMSLAILRIIRLVR 352
Query: 259 ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
+ R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 353 VFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 402
>sp|P08510|KCNAS_DROME Potassium voltage-gated channel protein Shaker OS=Drosophila
melanogaster GN=Sh PE=1 SV=3
Length = 655
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 106/197 (53%), Gaps = 28/197 (14%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAAFFY 93
++A+ SVF I +S+V F L+T +P ++ F + N T + E D FF
Sbjct: 228 VVAIISVFVILLSIVIFCLET-----LPEFKHYKVFNTTTNGTK-IEEDEVPDITDPFFL 281
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFY----------------- 136
+E C WFTFEL VR + PN F R +NVIDIIA + ++
Sbjct: 282 IETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLP 341
Query: 137 -TDILLQDKVQQSD----ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVF 191
+ QDK IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL+F
Sbjct: 342 KAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIF 401
Query: 192 FLVLGIVVFASLVYYAE 208
FL +G+V+F+S VY+AE
Sbjct: 402 FLFIGVVLFSSAVYFAE 418
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 22/122 (18%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFY------------------TDILLQDKVQQSD- 249
R PN F R +NVIDIIA + ++ + QDK
Sbjct: 297 RFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVSPQDKSSNQAM 356
Query: 250 ---ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYY 306
IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+V+F+S VY+
Sbjct: 357 SLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFLFIGVVLFSSAVYF 416
Query: 307 AE 308
AE
Sbjct: 417 AE 418
>sp|Q09470|KCNA1_HUMAN Potassium voltage-gated channel subfamily A member 1 OS=Homo
sapiens GN=KCNA1 PE=1 SV=2
Length = 495
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 116/198 (58%), Gaps = 24/198 (12%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFIS----LDNSTAWVL 80
E+ G A ++A+ SV I +S+V F L+T +P +++ F +DN+T
Sbjct: 161 ESSGPAR--VIAIVSVMVILISIVIFCLET-----LPELKDDKDFTGTVHRIDNTTVIYN 213
Query: 81 HKEKTDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFY---- 136
TDP FF VE C WF+FEL+VR P+ F ++ +N IDI+A + ++
Sbjct: 214 SNIFTDP---FFIVETLCIIWFSFELVVRFFACPSKTDFFKNIMNFIDIVAIIPYFITLG 270
Query: 137 TDILLQDKVQQSD------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLV 190
T+I Q+ Q+ + IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL+
Sbjct: 271 TEIAEQEGNQKGEQATSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLI 330
Query: 191 FFLVLGIVVFASLVYYAE 208
FFL +G+++F+S VY+AE
Sbjct: 331 FFLFIGVILFSSAVYFAE 348
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 70/110 (63%), Gaps = 10/110 (9%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFY----TDILLQDKVQQSD------ILEFFSIIR 258
R P+ F ++ +N IDI+A + ++ T+I Q+ Q+ + IL ++R
Sbjct: 239 RFFACPSKTDFFKNIMNFIDIVAIIPYFITLGTEIAEQEGNQKGEQATSLAILRVIRLVR 298
Query: 259 ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
+ R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 299 VFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 348
>sp|P22001|KCNA3_HUMAN Potassium voltage-gated channel subfamily A member 3 OS=Homo
sapiens GN=KCNA3 PE=2 SV=3
Length = 575
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 115/198 (58%), Gaps = 19/198 (9%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHPDMR----VPTIRNSSFFISLDNSTAWVL 80
E+ G A + A+ SV I +S+V F L+T P+ R P + F + NST+
Sbjct: 228 ESSGPARGI--AIVSVLVILISIVIFCLETLPEFRDEKDYPASTSQDSFEAAGNSTSGSR 285
Query: 81 HKEKT--DPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFY-- 136
+ DP FF VE C WF+FELLVR P+ F R+ +N+IDI+A + ++
Sbjct: 286 AGASSFSDP---FFVVETLCIIWFSFELLVRFFACPSKATFSRNIMNLIDIVAIIPYFIT 342
Query: 137 --TDIL-LQDKVQQS---DILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLV 190
T++ Q QQ+ IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL+
Sbjct: 343 LGTELAERQGNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLI 402
Query: 191 FFLVLGIVVFASLVYYAE 208
FFL +G+++F+S VY+AE
Sbjct: 403 FFLFIGVILFSSAVYFAE 420
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 70/108 (64%), Gaps = 8/108 (7%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFY----TDIL-LQDKVQQS---DILEFFSIIRIL 260
R P+ F R+ +N+IDI+A + ++ T++ Q QQ+ IL ++R+
Sbjct: 313 RFFACPSKATFSRNIMNLIDIVAIIPYFITLGTELAERQGNGQQAMSLAILRVIRLVRVF 372
Query: 261 RLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 373 RIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 420
>sp|Q9I830|KCNA2_ONCMY Potassium voltage-gated channel subfamily A member 2
OS=Oncorhynchus mykiss GN=kcna2 PE=2 SV=1
Length = 494
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 113/195 (57%), Gaps = 16/195 (8%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEK 84
E+ G A I+A+ SV I +S+VSF L+T P R S F + N+T +
Sbjct: 156 ESSGPAR--IIAIISVMVILISIVSFCLETLPIFRNDDDEPHSVFDTNTNTTIYFTSTYF 213
Query: 85 TDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFY----TDIL 140
TDP FF +E C WF+FE LVR P+ F + +N+ID++A + ++ T++
Sbjct: 214 TDP---FFILETLCIIWFSFEFLVRLFACPSKSGFFGNVMNIIDVVAIIPYFITLATELA 270
Query: 141 LQDKVQQSD-------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFL 193
+ + Q+ IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL+FFL
Sbjct: 271 EKPEDGQAGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFL 330
Query: 194 VLGIVVFASLVYYAE 208
+G+++F+S VY+AE
Sbjct: 331 FIGVILFSSAVYFAE 345
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 70/111 (63%), Gaps = 11/111 (9%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFY----TDILLQDKVQQSD-------ILEFFSII 257
RL P+ F + +N+ID++A + ++ T++ + + Q+ IL ++
Sbjct: 235 RLFACPSKSGFFGNVMNIIDVVAIIPYFITLATELAEKPEDGQAGQQAMSLAILRVIRLV 294
Query: 258 RILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
R+ R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 295 RVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 345
>sp|Q95L11|KCNB2_RABIT Potassium voltage-gated channel subfamily B member 2 OS=Oryctolagus
cuniculus GN=KCNB2 PE=2 SV=1
Length = 911
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 103/183 (56%), Gaps = 25/183 (13%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAAFFY 93
ILA+ S+ FI +S ++ +L T P+++ F DN +
Sbjct: 194 ILAIVSILFIVLSTIALSLNTLPELQ----ETDEFGQPSDN--------------PKLAH 235
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ------ 147
VE C AWFT E L+R + SPN ++F + P+NVID++A L +Y I L + +
Sbjct: 236 VEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQN 295
Query: 148 -SDILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYY 206
+++ F I+RILR+ KL RHS GL+ L T + S EL LL+ FL +GI++F+SLV++
Sbjct: 296 VRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFF 355
Query: 207 AER 209
AE+
Sbjct: 356 AEK 358
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 68/104 (65%), Gaps = 7/104 (6%)
Query: 213 SPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ-------SDILEFFSIIRILRLFKL 265
SPN ++F + P+NVID++A L +Y I L + + +++ F I+RILR+ KL
Sbjct: 255 SPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKL 314
Query: 266 TRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAER 309
RHS GL+ L T + S EL LL+ FL +GI++F+SLV++AE+
Sbjct: 315 ARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEK 358
>sp|Q92953|KCNB2_HUMAN Potassium voltage-gated channel subfamily B member 2 OS=Homo
sapiens GN=KCNB2 PE=2 SV=2
Length = 911
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 25/183 (13%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAAFFY 93
ILA+ S+ FI +S ++ +L T +P ++ + F L++ + +
Sbjct: 194 ILAIVSILFIVLSTIALSLNT-----LPELQETDEFGQLND-------------NRQLAH 235
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ------ 147
VE C AWFT E L+R + SPN ++F + P+NVID++A L +Y I L + +
Sbjct: 236 VEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQN 295
Query: 148 -SDILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYY 206
+++ F I+RILR+ KL RHS GL+ L T + S EL LL+ FL +GI++F+SLV++
Sbjct: 296 VRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFF 355
Query: 207 AER 209
AE+
Sbjct: 356 AEK 358
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 68/104 (65%), Gaps = 7/104 (6%)
Query: 213 SPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ-------SDILEFFSIIRILRLFKL 265
SPN ++F + P+NVID++A L +Y I L + + +++ F I+RILR+ KL
Sbjct: 255 SPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKL 314
Query: 266 TRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAER 309
RHS GL+ L T + S EL LL+ FL +GI++F+SLV++AE+
Sbjct: 315 ARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEK 358
>sp|Q4ZHA6|KCNB2_BOVIN Potassium voltage-gated channel subfamily B member 2 OS=Bos taurus
GN=KCNB2 PE=2 SV=1
Length = 911
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 25/183 (13%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAAFFY 93
ILA+ S+ FI +S ++ +L T P+++ F DN P A +
Sbjct: 194 ILAIVSILFIVLSTIALSLNTLPELQ----EMDEFGQPNDN------------PQLA--H 235
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ------ 147
VE C AWFT E L+R + SPN ++F + P+NVID++A L +Y I L + +
Sbjct: 236 VEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQN 295
Query: 148 -SDILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYY 206
+++ F I+RILR+ KL RHS GL+ L T + S EL LL+ FL +GI++F+SLV++
Sbjct: 296 VRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFF 355
Query: 207 AER 209
AE+
Sbjct: 356 AEK 358
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 68/104 (65%), Gaps = 7/104 (6%)
Query: 213 SPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ-------SDILEFFSIIRILRLFKL 265
SPN ++F + P+NVID++A L +Y I L + + +++ F I+RILR+ KL
Sbjct: 255 SPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKL 314
Query: 266 TRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAER 309
RHS GL+ L T + S EL LL+ FL +GI++F+SLV++AE+
Sbjct: 315 ARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEK 358
>sp|Q28293|KCNA2_CANFA Potassium voltage-gated channel subfamily A member 2 OS=Canis
familiaris GN=KCNA2 PE=2 SV=1
Length = 499
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 110/199 (55%), Gaps = 20/199 (10%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHP---DMRVPTIRNSSFFISLDNST-AWVL 80
E+ G A I+A+ SV I +S+VSF L+T P D F + NST +
Sbjct: 157 ESSGPAR--IIAIVSVMVILISIVSFCLETLPIFRDENEDMHGGGVTFHTYSNSTIGYQQ 214
Query: 81 HKEKTDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDIL 140
TDP FF VE C WF+FE LVR P+ F + +N+IDI+A + ++ +
Sbjct: 215 STSFTDP---FFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLG 271
Query: 141 LQ-----DKVQQSD------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLL 189
+ + QQ IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL
Sbjct: 272 TELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLL 331
Query: 190 VFFLVLGIVVFASLVYYAE 208
+FFL +G+++F+S VY+AE
Sbjct: 332 IFFLFIGVILFSSAVYFAE 350
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 11/111 (9%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQ-----DKVQQSD------ILEFFSII 257
R P+ F + +N+IDI+A + ++ + + + QQ IL ++
Sbjct: 240 RFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLV 299
Query: 258 RILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
R+ R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 300 RVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 350
>sp|P16389|KCNA2_HUMAN Potassium voltage-gated channel subfamily A member 2 OS=Homo
sapiens GN=KCNA2 PE=1 SV=2
Length = 499
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 111/199 (55%), Gaps = 20/199 (10%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHP---DMRVPTIRNSSFFISLDNST-AWVL 80
E+ G A I+A+ SV I +S+VSF L+T P D + F + NST +
Sbjct: 157 ESSGPAR--IIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQ 214
Query: 81 HKEKTDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDIL 140
TDP FF VE C WF+FE LVR P+ F + +N+IDI+A + ++ +
Sbjct: 215 STSFTDP---FFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLG 271
Query: 141 LQ-----DKVQQSD------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLL 189
+ + QQ IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL
Sbjct: 272 TELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLL 331
Query: 190 VFFLVLGIVVFASLVYYAE 208
+FFL +G+++F+S VY+AE
Sbjct: 332 IFFLFIGVILFSSAVYFAE 350
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 11/111 (9%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQ-----DKVQQSD------ILEFFSII 257
R P+ F + +N+IDI+A + ++ + + + QQ IL ++
Sbjct: 240 RFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLV 299
Query: 258 RILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
R+ R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 300 RVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 350
>sp|P63142|KCNA2_RAT Potassium voltage-gated channel subfamily A member 2 OS=Rattus
norvegicus GN=Kcna2 PE=1 SV=1
Length = 499
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 110/199 (55%), Gaps = 20/199 (10%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHP---DMRVPTIRNSSFFISLDNST-AWVL 80
E+ G A I+A+ SV I +S+VSF L+T P D F + NST +
Sbjct: 157 ESSGPAR--IIAIVSVMVILISIVSFCLETLPIFRDENEDMHGGGVTFHTYSNSTIGYQQ 214
Query: 81 HKEKTDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDIL 140
TDP FF VE C WF+FE LVR P+ F + +N+IDI+A + ++ +
Sbjct: 215 STSFTDP---FFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLG 271
Query: 141 LQ-----DKVQQSD------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLL 189
+ + QQ IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL
Sbjct: 272 TELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLL 331
Query: 190 VFFLVLGIVVFASLVYYAE 208
+FFL +G+++F+S VY+AE
Sbjct: 332 IFFLFIGVILFSSAVYFAE 350
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 11/111 (9%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQ-----DKVQQSD------ILEFFSII 257
R P+ F + +N+IDI+A + ++ + + + QQ IL ++
Sbjct: 240 RFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLV 299
Query: 258 RILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
R+ R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 300 RVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 350
>sp|P63141|KCNA2_MOUSE Potassium voltage-gated channel subfamily A member 2 OS=Mus
musculus GN=Kcna2 PE=1 SV=1
Length = 499
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 110/199 (55%), Gaps = 20/199 (10%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHP---DMRVPTIRNSSFFISLDNST-AWVL 80
E+ G A I+A+ SV I +S+VSF L+T P D F + NST +
Sbjct: 157 ESSGPAR--IIAIVSVMVILISIVSFCLETLPIFRDENEDMHGGGVTFHTYSNSTIGYQQ 214
Query: 81 HKEKTDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDIL 140
TDP FF VE C WF+FE LVR P+ F + +N+IDI+A + ++ +
Sbjct: 215 STSFTDP---FFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLG 271
Query: 141 LQ-----DKVQQSD------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLL 189
+ + QQ IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL
Sbjct: 272 TELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLL 331
Query: 190 VFFLVLGIVVFASLVYYAE 208
+FFL +G+++F+S VY+AE
Sbjct: 332 IFFLFIGVILFSSAVYFAE 350
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 11/111 (9%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQ-----DKVQQSD------ILEFFSII 257
R P+ F + +N+IDI+A + ++ + + + QQ IL ++
Sbjct: 240 RFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLV 299
Query: 258 RILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
R+ R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 300 RVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 350
>sp|Q63959|KCNC3_MOUSE Potassium voltage-gated channel subfamily C member 3 OS=Mus
musculus GN=Kcnc3 PE=2 SV=2
Length = 769
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 110/200 (55%), Gaps = 33/200 (16%)
Query: 35 LAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAA---- 90
+A S+FFI +S+ +F L+TH FI + N T + + P A
Sbjct: 292 VAFASLFFILISITTFCLETH-----------EGFIHISNKT---VTQASPIPGAPPENI 337
Query: 91 ----------FFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDIL 140
YVE C WFTFE L+R P+ +F++S +N+ID +A L FY ++
Sbjct: 338 TNVEVETEPFLTYVEGVCVVWFTFEFLMRVTFCPDKVEFLKSSLNIIDCVAILPFYLEVG 397
Query: 141 LQDKVQQS--DILEFFSIIR---ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVL 195
L ++ D+L F ++R ILR+FKLTRH GL++L HT +AS E LL+ FL L
Sbjct: 398 LSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLAL 457
Query: 196 GIVVFASLVYYAERLQVSPN 215
G+++FA+++YYAER+ P+
Sbjct: 458 GVLIFATMIYYAERIGADPD 477
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DILEFFSIIR---ILRLF 263
R+ P+ +F++S +N+ID +A L FY ++ L ++ D+L F ++R ILR+F
Sbjct: 366 RVTFCPDKVEFLKSSLNIIDCVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIF 425
Query: 264 KLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERL 310
KLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAER+
Sbjct: 426 KLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERI 472
>sp|Q03717|KCNB1_MOUSE Potassium voltage-gated channel subfamily B member 1 OS=Mus
musculus GN=Kcnb1 PE=1 SV=2
Length = 857
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 25/183 (13%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAAFFY 93
ILA+ S+ FI +S ++ +L T P+++ F S DN P A +
Sbjct: 190 ILAIISIMFIVLSTIALSLNTLPELQS----LDEFGQSTDN------------PQLA--H 231
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ------ 147
VE C AWFT E L+R + SP ++F + P+N ID++A L +Y I L + +
Sbjct: 232 VEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNKSVLQFQN 291
Query: 148 -SDILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYY 206
+++ F I+RILR+ KL RHS GL+ L T + S EL LL+ FL +GI++F+SLV++
Sbjct: 292 VRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFF 351
Query: 207 AER 209
AE+
Sbjct: 352 AEK 354
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 7/104 (6%)
Query: 213 SPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ-------SDILEFFSIIRILRLFKL 265
SP ++F + P+N ID++A L +Y I L + + +++ F I+RILR+ KL
Sbjct: 251 SPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKL 310
Query: 266 TRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAER 309
RHS GL+ L T + S EL LL+ FL +GI++F+SLV++AE+
Sbjct: 311 ARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEK 354
>sp|P15387|KCNB1_RAT Potassium voltage-gated channel subfamily B member 1 OS=Rattus
norvegicus GN=Kcnb1 PE=1 SV=3
Length = 857
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 25/183 (13%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAAFFY 93
ILA+ S+ FI +S ++ +L T P+++ F S DN P A +
Sbjct: 190 ILAIISIMFIVLSTIALSLNTLPELQS----LDEFGQSTDN------------PQLA--H 231
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ------ 147
VE C AWFT E L+R + SP ++F + P+N ID++A L +Y I L + +
Sbjct: 232 VEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNKSVLQFQN 291
Query: 148 -SDILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYY 206
+++ F I+RILR+ KL RHS GL+ L T + S EL LL+ FL +GI++F+SLV++
Sbjct: 292 VRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFF 351
Query: 207 AER 209
AE+
Sbjct: 352 AEK 354
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ-------SDILEFFSIIRILR 261
R SP ++F + P+N ID++A L +Y I L + + +++ F I+RILR
Sbjct: 247 RFLSSPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILR 306
Query: 262 LFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAER 309
+ KL RHS GL+ L T + S EL LL+ FL +GI++F+SLV++AE+
Sbjct: 307 ILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEK 354
>sp|P15384|KCNA3_RAT Potassium voltage-gated channel subfamily A member 3 OS=Rattus
norvegicus GN=Kcna3 PE=1 SV=2
Length = 525
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 114/198 (57%), Gaps = 19/198 (9%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHPDMR----VPTIRNSSFFISLDNSTAWVL 80
E+ G A + A+ SV I +S+V F L+T P+ R P + F + +NST+
Sbjct: 178 ESSGPARGI--AIVSVLVILISIVIFCLETLPEFRDEKDYPASPSQDVFEAANNSTSGAS 235
Query: 81 HKEKT--DPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTD 138
+ DP FF VE C WF+FELLVR P+ F R+ +N+IDI+A + ++
Sbjct: 236 SGASSFSDP---FFVVETLCIIWFSFELLVRFFACPSKATFSRNIMNLIDIVAIIPYFIT 292
Query: 139 ILL-----QDKVQQS---DILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLV 190
+ Q QQ+ IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL+
Sbjct: 293 LGTELAERQGNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLI 352
Query: 191 FFLVLGIVVFASLVYYAE 208
FFL +G+++F+S VY+AE
Sbjct: 353 FFLFIGVILFSSAVYFAE 370
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 68/108 (62%), Gaps = 8/108 (7%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILL-----QDKVQQS---DILEFFSIIRIL 260
R P+ F R+ +N+IDI+A + ++ + Q QQ+ IL ++R+
Sbjct: 263 RFFACPSKATFSRNIMNLIDIVAIIPYFITLGTELAERQGNGQQAMSLAILRVIRLVRVF 322
Query: 261 RLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
R+FKL+RHS GL+IL T KAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 323 RIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 370
>sp|Q14721|KCNB1_HUMAN Potassium voltage-gated channel subfamily B member 1 OS=Homo
sapiens GN=KCNB1 PE=1 SV=2
Length = 858
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 25/183 (13%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAAFFY 93
ILA+ S+ FI +S ++ +L T P+++ F S DN P A +
Sbjct: 190 ILAIISIMFIVLSTIALSLNTLPELQS----LDEFGQSTDN------------PQLA--H 231
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ------ 147
VE C AWFT E L+R + SP ++F + P+N ID++A L +Y I L + +
Sbjct: 232 VEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNKSVLQFQN 291
Query: 148 -SDILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYY 206
+++ F I+RILR+ KL RHS GL+ L T + S EL LL+ FL +GI++F+SLV++
Sbjct: 292 VRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFF 351
Query: 207 AER 209
AE+
Sbjct: 352 AEK 354
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ-------SDILEFFSIIRILR 261
R SP ++F + P+N ID++A L +Y I L + + +++ F I+RILR
Sbjct: 247 RFLSSPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILR 306
Query: 262 LFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAER 309
+ KL RHS GL+ L T + S EL LL+ FL +GI++F+SLV++AE+
Sbjct: 307 ILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEK 354
>sp|Q14003|KCNC3_HUMAN Potassium voltage-gated channel subfamily C member 3 OS=Homo
sapiens GN=KCNC3 PE=1 SV=3
Length = 757
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 110/200 (55%), Gaps = 33/200 (16%)
Query: 35 LAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAA---- 90
+A S+FFI +S+ +F L+TH FI + N T + + P A
Sbjct: 292 VAFASLFFILISITTFCLETH-----------EGFIHISNKT---VTQASPIPGAPPENI 337
Query: 91 ----------FFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDIL 140
YVE C WFTFE L+R P+ +F++S +N+ID +A L FY ++
Sbjct: 338 TNVEVETEPFLTYVEGVCVVWFTFEFLMRITFCPDKVEFLKSSLNIIDCVAILPFYLEVG 397
Query: 141 LQDKVQQS--DILEFFSIIR---ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVL 195
L ++ D+L F ++R ILR+FKLTRH GL++L HT +AS E LL+ FL L
Sbjct: 398 LSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLAL 457
Query: 196 GIVVFASLVYYAERLQVSPN 215
G+++FA+++YYAER+ P+
Sbjct: 458 GVLIFATMIYYAERIGADPD 477
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DILEFFSIIR---ILRLF 263
R+ P+ +F++S +N+ID +A L FY ++ L ++ D+L F ++R ILR+F
Sbjct: 366 RITFCPDKVEFLKSSLNIIDCVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIF 425
Query: 264 KLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERL 310
KLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAER+
Sbjct: 426 KLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERI 472
>sp|Q9MZ19|KCNB1_RABIT Potassium voltage-gated channel subfamily B member 1 OS=Oryctolagus
cuniculus GN=KCNB1 PE=2 SV=1
Length = 858
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 105/183 (57%), Gaps = 25/183 (13%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAAFFY 93
ILA+ S+ FI +S ++ +L T P+++ SLD + TD + +
Sbjct: 190 ILAIISIMFIVLSTIALSLNTLPELQ-----------SLDE------FGQTTD-NPQLAH 231
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ------ 147
VE C AWFT E L+R + SP ++F + P+N ID++A L +Y I L + +
Sbjct: 232 VEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNKSVLQFQN 291
Query: 148 -SDILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYY 206
+++ F I+RILR+ KL RHS GL+ L T + S EL LL+ FL +GI++F+SLV++
Sbjct: 292 VRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFF 351
Query: 207 AER 209
AE+
Sbjct: 352 AEK 354
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 7/104 (6%)
Query: 213 SPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ-------SDILEFFSIIRILRLFKL 265
SP ++F + P+N ID++A L +Y I L + + +++ F I+RILR+ KL
Sbjct: 251 SPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKL 310
Query: 266 TRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAER 309
RHS GL+ L T + S EL LL+ FL +GI++F+SLV++AE+
Sbjct: 311 ARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEK 354
>sp|O18868|KCNB1_PIG Potassium voltage-gated channel subfamily B member 1 OS=Sus scrofa
GN=KCNB1 PE=2 SV=1
Length = 858
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 105/183 (57%), Gaps = 25/183 (13%)
Query: 34 ILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAAFFY 93
ILA+ S+ FI +S ++ +L T P+++ SLD + TD + +
Sbjct: 190 ILAIISIMFIVLSTIALSLNTLPELQ-----------SLDE------FGQTTD-NPQLAH 231
Query: 94 VELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ------ 147
VE C AWFT E L+R + SP ++F + P+N ID++A L +Y I L + +
Sbjct: 232 VEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNKSVLQFQN 291
Query: 148 -SDILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYY 206
+++ F I+RILR+ KL RHS GL+ L T + S EL LL+ FL +GI++F+SLV++
Sbjct: 292 VRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFF 351
Query: 207 AER 209
AE+
Sbjct: 352 AEK 354
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 7/104 (6%)
Query: 213 SPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQ-------SDILEFFSIIRILRLFKL 265
SP ++F + P+N ID++A L +Y I L + + +++ F I+RILR+ KL
Sbjct: 251 SPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKL 310
Query: 266 TRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAER 309
RHS GL+ L T + S EL LL+ FL +GI++F+SLV++AE+
Sbjct: 311 ARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEK 354
>sp|Q01956|KCNC3_RAT Potassium voltage-gated channel subfamily C member 3 OS=Rattus
norvegicus GN=Kcnc3 PE=2 SV=1
Length = 889
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 110/200 (55%), Gaps = 33/200 (16%)
Query: 35 LAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHAA---- 90
+A S+FFI +S+ +F L+TH FI + N T + + P A
Sbjct: 293 VAFASLFFILISITTFCLETH-----------EGFIHISNKT---VTQASPIPGAPPENI 338
Query: 91 ----------FFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDIL 140
YVE C WFTFE L+R P+ +F++S +N+ID +A L FY ++
Sbjct: 339 TNVEVETEPFLTYVEGVCVVWFTFEFLMRVTFCPDKVEFLKSSLNIIDCVAILPFYLEVG 398
Query: 141 LQDKVQQS--DILEFFSIIR---ILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVL 195
L ++ D+L F ++R ILR+FKLTRH GL++L HT +AS E LL+ FL L
Sbjct: 399 LSGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLAL 458
Query: 196 GIVVFASLVYYAERLQVSPN 215
G+++FA+++YYAER+ P+
Sbjct: 459 GVLIFATMIYYAERIGADPD 478
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 73/107 (68%), Gaps = 5/107 (4%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQS--DILEFFSIIR---ILRLF 263
R+ P+ +F++S +N+ID +A L FY ++ L ++ D+L F ++R ILR+F
Sbjct: 367 RVTFCPDKVEFLKSSLNIIDCVAILPFYLEVGLSGLSSKAAKDVLGFLRVVRFVRILRIF 426
Query: 264 KLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAERL 310
KLTRH GL++L HT +AS E LL+ FL LG+++FA+++YYAER+
Sbjct: 427 KLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERI 473
>sp|Q09081|KCNA2_RABIT Potassium voltage-gated channel subfamily A member 2 (Fragment)
OS=Oryctolagus cuniculus GN=KCNA2 PE=2 SV=1
Length = 273
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 111/195 (56%), Gaps = 19/195 (9%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEK 84
E+ G A I+A+ SV I +S+VSF L+T P R + +F + NST
Sbjct: 77 ESSGPAR--IIAIVSVMVILISIVSFCLETLPIFRDENDMHGTFH-TYSNSTIGYQQTSF 133
Query: 85 TDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVI------DIIATLSFYTD 138
TDP FF VE C WF+FE LVR P+ F + +N+I +ATL T+
Sbjct: 134 TDP---FFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIISIIPYLATL--ITE 188
Query: 139 ILLQDKVQQSD-----ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFL 193
++ +D Q+ IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL+FFL
Sbjct: 189 LVQEDGAQRQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFL 248
Query: 194 VLGIVVFASLVYYAE 208
+G+++F+S VY+AE
Sbjct: 249 FIGVILFSSAVYFAE 263
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 5/77 (6%)
Query: 237 TDILLQDKVQQSD-----ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVF 291
T+++ +D Q+ IL ++R+ R+FKL+RHS GL+IL T KAS +EL LL+F
Sbjct: 187 TELVQEDGAQRQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIF 246
Query: 292 FLVLGIVVFASLVYYAE 308
FL +G+++F+S VY+AE
Sbjct: 247 FLFIGVILFSSAVYFAE 263
>sp|Q17ST2|KCNA7_MOUSE Potassium voltage-gated channel subfamily A member 7 OS=Mus
musculus GN=Kcna7 PE=2 SV=2
Length = 489
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 8/152 (5%)
Query: 65 NSSFFISLDNSTAWVLHKEKTDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPV 124
F L+ S+ + + FF VE C WF+FELLVR V P+ F ++ +
Sbjct: 216 TGPFLARLNGSSPMPGAPPRQPFNDPFFVVETLCICWFSFELLVRLVACPSKAVFFKNVM 275
Query: 125 NVIDIIATLSFY----TDILLQDKVQQSD----ILEFFSIIRILRLFKLTRHSPGLKILI 176
N+ID +A L ++ T++ Q V Q IL ++R+ R+FKL+RHS GL+IL
Sbjct: 276 NLIDFVAILPYFVALGTELARQRGVGQPAMSLAILRVIRLVRVFRIFKLSRHSKGLQILG 335
Query: 177 HTFKASAKELTLLVFFLVLGIVVFASLVYYAE 208
T +AS +EL LL+FFL +G+V+F+S VY+AE
Sbjct: 336 QTLRASMRELGLLIFFLFIGVVLFSSAVYFAE 367
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 69/108 (63%), Gaps = 8/108 (7%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFY----TDILLQDKVQQSD----ILEFFSIIRIL 260
RL P+ F ++ +N+ID +A L ++ T++ Q V Q IL ++R+
Sbjct: 260 RLVACPSKAVFFKNVMNLIDFVAILPYFVALGTELARQRGVGQPAMSLAILRVIRLVRVF 319
Query: 261 RLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
R+FKL+RHS GL+IL T +AS +EL LL+FFL +G+V+F+S VY+AE
Sbjct: 320 RIFKLSRHSKGLQILGQTLRASMRELGLLIFFLFIGVVLFSSAVYFAE 367
>sp|P22739|KCNA2_XENLA Potassium voltage-gated channel subfamily A member 2 OS=Xenopus
laevis GN=kcna2 PE=3 SV=2
Length = 499
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 20/199 (10%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHP---DMRVPTIRNSSFFISLDNSTAWVLH 81
E+ G A I+A+ SV I +S+VSF L+T P D + + S NST
Sbjct: 157 ESSGPAR--IIAIISVTVILISIVSFCLETLPVFRDENEDMHGSGGNYYSYPNSTVRFQK 214
Query: 82 KEK-TDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFYTDIL 140
TDP FF VE C WF+FE LVR + P+ F + +N+IDI+A + ++ +
Sbjct: 215 SNTFTDP---FFIVETLCIIWFSFEFLVRFLACPSKAVFFTNLMNIIDIVAIIPYFITLG 271
Query: 141 LQ-----DKVQQSD------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLL 189
+ + QQ IL ++R+ R+FKL+RHS GL+IL T AS +EL LL
Sbjct: 272 TELAEKTEDGQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLNASMRELGLL 331
Query: 190 VFFLVLGIVVFASLVYYAE 208
+FFL +G+++F+S V++AE
Sbjct: 332 IFFLFIGVILFSSAVFFAE 350
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 11/111 (9%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFYTDILLQ-----DKVQQSD------ILEFFSII 257
R P+ F + +N+IDI+A + ++ + + + QQ IL ++
Sbjct: 240 RFLACPSKAVFFTNLMNIIDIVAIIPYFITLGTELAEKTEDGQQGQQAMSLAILRVIRLV 299
Query: 258 RILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
R+ R+FKL+RHS GL+IL T AS +EL LL+FFL +G+++F+S V++AE
Sbjct: 300 RVFRIFKLSRHSKGLQILGQTLNASMRELGLLIFFLFIGVILFSSAVFFAE 350
>sp|Q05037|KCNA4_BOVIN Potassium voltage-gated channel subfamily A member 4 OS=Bos taurus
GN=KCNA4 PE=2 SV=1
Length = 660
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 26/196 (13%)
Query: 35 LAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPHA----- 89
+A+ SV I +S+V F L+T P+ R + ++L L + + PH
Sbjct: 317 IAIVSVLVILISIVIFCLETLPEFR----DDRDLIMALSTGGHGGLLNDTSAPHPENSGH 372
Query: 90 -----AFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFY----TDIL 140
FF VE C WF+FE +VR P+ F ++ +N+IDI++ L ++ TD+
Sbjct: 373 TIFNDPFFIVETVCIVWFSFEFVVRCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLA 432
Query: 141 LQDKVQQSD--------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFF 192
Q IL ++R+ R+FKL+RHS GL+IL HT +AS +EL LL+FF
Sbjct: 433 QQQGGGNGQQQQAMSFAILRIIRLVRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFF 492
Query: 193 LVLGIVVFASLVYYAE 208
L +G+++F+S VY+AE
Sbjct: 493 LFIGVILFSSAVYFAE 508
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 12/112 (10%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFY----TDILLQDKVQQSD--------ILEFFSI 256
R P+ F ++ +N+IDI++ L ++ TD+ Q IL +
Sbjct: 397 RCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLAQQQGGGNGQQQQAMSFAILRIIRL 456
Query: 257 IRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
+R+ R+FKL+RHS GL+IL HT +AS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 457 VRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAE 508
>sp|P50638|KCNA5_RABIT Potassium voltage-gated channel subfamily A member 5 OS=Oryctolagus
cuniculus GN=KCNA5 PE=2 SV=1
Length = 598
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 115/221 (52%), Gaps = 44/221 (19%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHPD-------MRVPTI------------RN 65
E+ G A + A+ SV I +S+++F L+T P+ +R P +
Sbjct: 228 ESSGSARAI--AIVSVLVILISIITFCLETLPEFKDERELLRHPPVPHQPPAAPALGANG 285
Query: 66 SSFFISLDNST-AWVLHKEKTDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPV 124
S ST A +L + DP FF VE C WFTFELLVR P+ +F R+ +
Sbjct: 286 SGAVAPASGSTVAPLLPRTLADP---FFIVETTCVIWFTFELLVRFFACPSKAEFSRNIM 342
Query: 125 NVIDIIATLSFYTDILLQDKVQQSD-----------------ILEFFSIIRILRLFKLTR 167
N+IDI+A ++ I L ++ + IL ++R+ R+FKL+R
Sbjct: 343 NIIDIVAIFPYF--ITLGTELAEQQPGGGGGGQNGQQAMSLAILRVIRLVRVFRIFKLSR 400
Query: 168 HSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 208
HS GL+IL T +AS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 401 HSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAE 441
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 19/114 (16%)
Query: 212 VSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQSD-----------------ILEFF 254
P+ +F R+ +N+IDI+A ++ I L ++ + IL
Sbjct: 330 ACPSKAEFSRNIMNIIDIVAIFPYF--ITLGTELAEQQPGGGGGGQNGQQAMSLAILRVI 387
Query: 255 SIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
++R+ R+FKL+RHS GL+IL T +AS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 388 RLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAE 441
>sp|P19024|KCNA5_RAT Potassium voltage-gated channel subfamily A member 5 OS=Rattus
norvegicus GN=Kcna5 PE=1 SV=1
Length = 602
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 116/218 (53%), Gaps = 41/218 (18%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHPDMR------------------VPTIRNS 66
E+ G A + A+ SV I +S+++F L+T P+ R P I S
Sbjct: 235 ESSGSARAI--AIVSVLVILISIITFCLETLPEFRDERELLRHPPVPPQPPAPAPGINGS 292
Query: 67 -SFFISLDNSTAWVLHKEKTDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVN 125
S +S + A +L + DP FF VE C WFTFELLVR P+ +F R+ +N
Sbjct: 293 VSGALSSGPTVAPLLPRTLADP---FFIVETTCVIWFTFELLVRFFACPSKAEFSRNIMN 349
Query: 126 VIDIIATLSFYTDILLQDKVQQSD---------------ILEFFSIIRILRLFKLTRHSP 170
+ID++A ++ I L ++ + IL ++R+ R+FKL+RHS
Sbjct: 350 IIDVVAIFPYF--ITLGTELAEQQPGGGGQNGQQAMSLAILRVIRLVRVFRIFKLSRHSK 407
Query: 171 GLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 208
GL+IL T +AS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 408 GLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAE 445
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 17/112 (15%)
Query: 212 VSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQSD---------------ILEFFSI 256
P+ +F R+ +N+ID++A ++ I L ++ + IL +
Sbjct: 336 ACPSKAEFSRNIMNIIDVVAIFPYF--ITLGTELAEQQPGGGGQNGQQAMSLAILRVIRL 393
Query: 257 IRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
+R+ R+FKL+RHS GL+IL T +AS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 394 VRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAE 445
>sp|P22459|KCNA4_HUMAN Potassium voltage-gated channel subfamily A member 4 OS=Homo
sapiens GN=KCNA4 PE=1 SV=2
Length = 653
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 26/196 (13%)
Query: 35 LAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPH------ 88
+A+ SV I +S+V F L+T P+ R + ++L L + + PH
Sbjct: 309 IAIVSVLVILISIVIFCLETLPEFR----DDRDLVMALSAGGHGGLLNDTSAPHLENSGH 364
Query: 89 ----AAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFY----TDIL 140
FF VE C WF+FE +VR P+ F ++ +N+IDI++ L ++ TD+
Sbjct: 365 TIFNDPFFIVETVCIVWFSFEFVVRCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLA 424
Query: 141 LQDKVQQSD--------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFF 192
Q IL ++R+ R+FKL+RHS GL+IL HT +AS +EL LL+FF
Sbjct: 425 QQQGGGNGQQQQAMSFAILRIIRLVRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFF 484
Query: 193 LVLGIVVFASLVYYAE 208
L +G+++F+S VY+AE
Sbjct: 485 LFIGVILFSSAVYFAE 500
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 12/112 (10%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFY----TDILLQDKVQQSD--------ILEFFSI 256
R P+ F ++ +N+IDI++ L ++ TD+ Q IL +
Sbjct: 389 RCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLAQQQGGGNGQQQQAMSFAILRIIRL 448
Query: 257 IRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
+R+ R+FKL+RHS GL+IL HT +AS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 449 VRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAE 500
>sp|P79197|KCNA5_MUSPF Potassium voltage-gated channel subfamily A member 5 OS=Mustela
putorius furo GN=KCNA5 PE=2 SV=1
Length = 601
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 115/219 (52%), Gaps = 42/219 (19%)
Query: 25 ETIGDAYMVILAVTSVFFICVSVVSFALKTHPD-------MRVPTIRNSSFFISLDNST- 76
E+ G A + A+ SV I +S+++F L+T P+ +R P + + S +
Sbjct: 233 ESSGSARGI--AIVSVLVILISIITFCLETLPEFRDERELLRHPPVPHQPLGPSRGANGS 290
Query: 77 -----------AWVLHKEKTDPHAAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVN 125
A +L + DP FF VE C WFTFELLVR P+ +F R+ +N
Sbjct: 291 GPLAPPSGPTVAPLLPRTLADP---FFIVETTCVIWFTFELLVRFFACPSKAEFSRNIMN 347
Query: 126 VIDIIATLSFYTDILLQDKVQQSD----------------ILEFFSIIRILRLFKLTRHS 169
+ID++A ++ I L ++ + IL ++R+ R+FKL+RHS
Sbjct: 348 IIDVVAIFPYF--ITLGTELAEQPGGGGGGQNGQQAMSLAILRVIRLVRVFRIFKLSRHS 405
Query: 170 PGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 208
GL+IL T +AS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 406 KGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAE 444
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 18/113 (15%)
Query: 212 VSPNIFQFIRSPVNVIDIIATLSFYTDILLQDKVQQSD----------------ILEFFS 255
P+ +F R+ +N+ID++A ++ I L ++ + IL
Sbjct: 334 ACPSKAEFSRNIMNIIDVVAIFPYF--ITLGTELAEQPGGGGGGQNGQQAMSLAILRVIR 391
Query: 256 IIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
++R+ R+FKL+RHS GL+IL T +AS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 392 LVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAE 444
>sp|Q61423|KCNA4_MOUSE Potassium voltage-gated channel subfamily A member 4 OS=Mus
musculus GN=Kcna4 PE=1 SV=2
Length = 654
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 26/196 (13%)
Query: 35 LAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPH------ 88
+A+ SV I +S+V F L+T P+ R + ++L L + + PH
Sbjct: 310 IAIVSVLVILISIVIFCLETLPEFR----DDRDLIMALSAGGHSRLLNDTSAPHLENSGH 365
Query: 89 ----AAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFY----TDIL 140
FF VE C WF+FE +VR P+ F ++ +N+IDI++ L ++ TD+
Sbjct: 366 TIFNDPFFIVETVCIVWFSFEFVVRCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLA 425
Query: 141 LQDKVQQSD--------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFF 192
Q IL ++R+ R+FKL+RHS GL+IL HT +AS +EL LL+FF
Sbjct: 426 QQQGGGNGQQQQAMSFAILRIIRLVRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFF 485
Query: 193 LVLGIVVFASLVYYAE 208
L +G+++F+S VY+AE
Sbjct: 486 LFIGVILFSSAVYFAE 501
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 12/112 (10%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFY----TDILLQDKVQQSD--------ILEFFSI 256
R P+ F ++ +N+IDI++ L ++ TD+ Q IL +
Sbjct: 390 RCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLAQQQGGGNGQQQQAMSFAILRIIRL 449
Query: 257 IRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
+R+ R+FKL+RHS GL+IL HT +AS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 450 VRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAE 501
>sp|Q28527|KCNA4_MUSPF Potassium voltage-gated channel subfamily A member 4 OS=Mustela
putorius furo GN=KCNA4 PE=2 SV=1
Length = 654
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 26/196 (13%)
Query: 35 LAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPH------ 88
+A+ SV I +S+V F L+T P+ R + ++L L + + PH
Sbjct: 310 IAIVSVLVILISIVIFCLETLPEFR----DDRDLIMALSAGGHSGLLNDTSAPHLENSGH 365
Query: 89 ----AAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFY----TDIL 140
FF VE C WF+FE +VR P+ F ++ +N+IDI++ L ++ TD+
Sbjct: 366 TIFNDPFFIVETVCIVWFSFEFVVRCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLA 425
Query: 141 LQDKVQQSD--------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFF 192
Q IL ++R+ R+FKL+RHS GL+IL HT +AS +EL LL+FF
Sbjct: 426 QQQGGGNGQQQQAMSFAILRIIRLVRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFF 485
Query: 193 LVLGIVVFASLVYYAE 208
L +G+++F+S VY+AE
Sbjct: 486 LFIGVILFSSAVYFAE 501
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 12/112 (10%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFY----TDILLQDKVQQSD--------ILEFFSI 256
R P+ F ++ +N+IDI++ L ++ TD+ Q IL +
Sbjct: 390 RCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLAQQQGGGNGQQQQAMSFAILRIIRL 449
Query: 257 IRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
+R+ R+FKL+RHS GL+IL HT +AS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 450 VRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAE 501
>sp|P15385|KCNA4_RAT Potassium voltage-gated channel subfamily A member 4 OS=Rattus
norvegicus GN=Kcna4 PE=1 SV=1
Length = 655
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 26/196 (13%)
Query: 35 LAVTSVFFICVSVVSFALKTHPDMRVPTIRNSSFFISLDNSTAWVLHKEKTDPH------ 88
+A+ SV I +S+V F L+T P+ R + ++L L + + PH
Sbjct: 311 IAIVSVLVILISIVIFCLETLPEFR----DDRDLIMALSAGGHSRLLNDTSAPHLENSGH 366
Query: 89 ----AAFFYVELACNAWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFY----TDIL 140
FF VE C WF+FE +VR P+ F ++ +N+IDI++ L ++ TD+
Sbjct: 367 TIFNDPFFIVETVCIVWFSFEFVVRCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLA 426
Query: 141 LQDKVQQSD--------ILEFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFF 192
Q IL ++R+ R+FKL+RHS GL+IL HT +AS +EL LL+FF
Sbjct: 427 QQQGGGNGQQQQAMSFAILRIIRLVRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFF 486
Query: 193 LVLGIVVFASLVYYAE 208
L +G+++F+S VY+AE
Sbjct: 487 LFIGVILFSSAVYFAE 502
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 12/112 (10%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFY----TDILLQDKVQQSD--------ILEFFSI 256
R P+ F ++ +N+IDI++ L ++ TD+ Q IL +
Sbjct: 391 RCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLAQQQGGGNGQQQQAMSFAILRIIRL 450
Query: 257 IRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
+R+ R+FKL+RHS GL+IL HT +AS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 451 VRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAE 502
>sp|Q96RP8|KCNA7_HUMAN Potassium voltage-gated channel subfamily A member 7 OS=Homo
sapiens GN=KCNA7 PE=2 SV=1
Length = 456
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 101/177 (57%), Gaps = 20/177 (11%)
Query: 50 FALKTHPDMRVPTIRNSSFFIS----------LDNSTAWVLHKEKTDPHAAFFYVELACN 99
F L+T PD R R+ + + L+ S+ + + + FF VE C
Sbjct: 160 FCLETLPDFR--DDRDGTGLAAAAAAGPFPAPLNGSSQMPGNPPRLPFNDPFFVVETLCI 217
Query: 100 AWFTFELLVRAVVSPNIFQFIRSPVNVIDIIATLSFY----TDILLQDKVQQSD----IL 151
WF+FELLVR +V P+ F ++ +N+ID +A L ++ T++ Q V Q IL
Sbjct: 218 CWFSFELLVRLLVCPSKAIFFKNVMNLIDFVAILPYFVALGTELARQRGVGQQAMSLAIL 277
Query: 152 EFFSIIRILRLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 208
++R+ R+FKL+RHS GL+IL T +AS +EL LL+FFL +G+V+F+S VY+AE
Sbjct: 278 RVIRLVRVFRIFKLSRHSKGLQILGQTLRASMRELGLLIFFLFIGVVLFSSAVYFAE 334
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 8/108 (7%)
Query: 209 RLQVSPNIFQFIRSPVNVIDIIATLSFY----TDILLQDKVQQSD----ILEFFSIIRIL 260
RL V P+ F ++ +N+ID +A L ++ T++ Q V Q IL ++R+
Sbjct: 227 RLLVCPSKAIFFKNVMNLIDFVAILPYFVALGTELARQRGVGQQAMSLAILRVIRLVRVF 286
Query: 261 RLFKLTRHSPGLKILIHTFKASAKELTLLVFFLVLGIVVFASLVYYAE 308
R+FKL+RHS GL+IL T +AS +EL LL+FFL +G+V+F+S VY+AE
Sbjct: 287 RIFKLSRHSKGLQILGQTLRASMRELGLLIFFLFIGVVLFSSAVYFAE 334
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.144 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,838,157
Number of Sequences: 539616
Number of extensions: 3995712
Number of successful extensions: 13042
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 11956
Number of HSP's gapped (non-prelim): 791
length of query: 339
length of database: 191,569,459
effective HSP length: 118
effective length of query: 221
effective length of database: 127,894,771
effective search space: 28264744391
effective search space used: 28264744391
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 61 (28.1 bits)