Query psy15556
Match_columns 288
No_of_seqs 280 out of 1714
Neff 6.6
Searched_HMMs 29240
Date Sat Aug 17 00:18:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15556.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15556hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cob_A Kinesin heavy chain-lik 100.0 3.4E-46 1.2E-50 355.4 9.3 158 2-171 193-352 (369)
2 3b6u_A Kinesin-like protein KI 100.0 6.1E-46 2.1E-50 353.9 8.6 156 2-163 215-372 (372)
3 2y65_A Kinesin, kinesin heavy 100.0 4.6E-46 1.6E-50 354.1 7.8 161 2-171 198-361 (365)
4 3bfn_A Kinesin-like protein KI 100.0 1.8E-45 6.3E-50 352.0 9.4 154 2-164 212-367 (388)
5 2vvg_A Kinesin-2; motor protei 100.0 2.5E-45 8.5E-50 347.4 9.9 147 2-156 199-347 (350)
6 1t5c_A CENP-E protein, centrom 100.0 2.5E-44 8.7E-49 340.4 12.8 152 2-158 189-342 (349)
7 1x88_A Kinesin-like protein KI 100.0 9.8E-45 3.4E-49 344.5 8.7 145 2-153 213-359 (359)
8 1goj_A Kinesin, kinesin heavy 100.0 3.7E-44 1.3E-48 340.0 11.6 146 2-156 195-342 (355)
9 2owm_A Nckin3-434, related to 100.0 4.5E-44 1.5E-48 348.0 11.7 154 2-159 255-429 (443)
10 2zfi_A Kinesin-like protein KI 100.0 5.8E-44 2E-48 339.9 8.5 150 2-153 204-363 (366)
11 2wbe_C Bipolar kinesin KRP-130 100.0 5.1E-44 1.8E-48 341.0 5.6 146 2-154 223-371 (373)
12 3lre_A Kinesin-like protein KI 100.0 7.9E-43 2.7E-47 330.9 10.2 139 2-144 215-355 (355)
13 1f9v_A Kinesin-like protein KA 100.0 9.9E-43 3.4E-47 329.4 9.6 141 2-149 204-346 (347)
14 3t0q_A AGR253WP; kinesin, alph 100.0 2.1E-42 7.2E-47 327.4 10.5 140 2-148 207-348 (349)
15 1bg2_A Kinesin; motor protein, 100.0 1.2E-42 4.1E-47 326.2 8.3 133 2-144 191-325 (325)
16 1ry6_A Internal kinesin; kines 100.0 2E-42 6.7E-47 328.6 9.8 140 2-154 199-341 (360)
17 3nwn_A Kinesin-like protein KI 100.0 8.7E-43 3E-47 331.0 6.6 136 2-144 222-359 (359)
18 2h58_A Kinesin-like protein KI 100.0 2.9E-42 9.8E-47 324.2 9.7 134 2-145 194-329 (330)
19 3gbj_A KIF13B protein; kinesin 100.0 4.2E-42 1.4E-46 325.9 10.2 140 2-143 206-349 (354)
20 4a14_A Kinesin, kinesin-like p 100.0 4.6E-42 1.6E-46 324.6 10.1 140 2-142 201-344 (344)
21 2rep_A Kinesin-like protein KI 100.0 6.8E-42 2.3E-46 326.5 10.9 133 2-144 238-376 (376)
22 2nr8_A Kinesin-like protein KI 100.0 1.9E-42 6.7E-47 328.4 6.6 136 2-144 221-358 (358)
23 4etp_A Kinesin-like protein KA 100.0 5.6E-42 1.9E-46 330.0 8.4 141 2-149 260-402 (403)
24 3dc4_A Kinesin-like protein NO 100.0 1.4E-41 4.6E-46 321.1 10.2 131 2-148 207-339 (344)
25 2heh_A KIF2C protein; kinesin, 100.0 1.8E-40 6.2E-45 317.4 9.1 131 2-147 251-385 (387)
26 4h1g_A Maltose binding protein 100.0 2.5E-40 8.6E-45 338.6 10.4 135 2-145 576-712 (715)
27 1v8k_A Kinesin-like protein KI 100.0 2.5E-40 8.7E-45 318.3 8.8 133 2-149 271-407 (410)
28 3u06_A Protein claret segregat 100.0 7.2E-40 2.5E-44 315.8 9.1 133 2-148 252-386 (412)
29 2kin_B Kinesin; motor protein, 100.0 5.1E-34 1.7E-38 224.2 4.5 98 66-166 1-99 (100)
30 3kin_B Kinesin heavy chain; mo 100.0 2E-31 6.7E-36 215.5 8.2 94 70-166 1-95 (117)
31 4egx_A Kinesin-like protein KI 99.7 7E-17 2.4E-21 139.9 8.7 81 197-277 7-93 (184)
32 4ejq_A Kinesin-like protein KI 99.1 3.6E-11 1.2E-15 101.0 5.9 59 217-277 3-63 (154)
33 3fm8_A Kinesin-like protein KI 98.3 2.2E-07 7.5E-12 75.2 1.6 35 241-275 15-49 (124)
34 1wln_A Afadin; beta sandwich, 96.0 0.0028 9.6E-08 50.2 2.2 32 244-275 3-36 (120)
35 3tnu_B Keratin, type II cytosk 78.1 23 0.00078 27.8 10.4 75 156-230 35-110 (129)
36 3tnu_A Keratin, type I cytoske 73.1 22 0.00076 28.0 8.9 73 158-230 39-112 (131)
37 3i00_A HIP-I, huntingtin-inter 70.1 37 0.0013 26.6 10.5 29 151-179 9-37 (120)
38 3bas_A Myosin heavy chain, str 67.3 33 0.0011 25.2 8.2 31 146-176 3-33 (89)
39 3iv1_A Tumor susceptibility ge 65.1 37 0.0013 24.7 9.4 63 155-224 9-71 (78)
40 4dci_A Uncharacterized protein 63.6 55 0.0019 26.6 9.5 88 145-235 17-106 (150)
41 3oja_B Anopheles plasmodium-re 61.7 59 0.002 31.2 11.2 24 118-141 391-414 (597)
42 2lw1_A ABC transporter ATP-bin 52.2 65 0.0022 23.4 8.6 21 199-219 60-80 (89)
43 2lw1_A ABC transporter ATP-bin 51.5 63 0.0021 23.5 7.3 22 205-227 63-84 (89)
44 3sjb_C Golgi to ER traffic pro 43.5 40 0.0014 25.3 5.0 26 153-178 19-44 (93)
45 3a7p_A Autophagy protein 16; c 41.4 1.4E+02 0.0049 24.2 9.1 24 156-179 67-90 (152)
46 3qne_A Seryl-tRNA synthetase, 40.5 2.2E+02 0.0075 27.4 11.1 60 159-218 35-94 (485)
47 2dq0_A Seryl-tRNA synthetase; 36.7 2.4E+02 0.0084 26.6 10.8 61 158-218 32-92 (455)
48 4a1x_C CP5-46-A peptide; hydro 34.5 23 0.00078 19.7 1.8 15 266-280 4-18 (26)
49 3ghg_A Fibrinogen alpha chain; 33.5 1.6E+02 0.0055 28.8 8.7 22 158-179 58-79 (562)
50 1x79_B RAB GTPase binding effe 30.5 1.9E+02 0.0064 22.3 9.6 72 158-229 7-79 (112)
51 1deq_A Fibrinogen (alpha chain 30.2 3.4E+02 0.012 25.3 10.2 20 160-179 63-82 (390)
52 4h22_A Leucine-rich repeat fli 26.1 2.2E+02 0.0074 21.7 6.9 28 200-227 35-62 (103)
53 2k48_A Nucleoprotein; viral pr 24.5 2.4E+02 0.008 21.5 7.3 68 156-233 34-102 (107)
54 2jee_A YIIU; FTSZ, septum, coi 23.9 2.1E+02 0.0072 20.7 9.0 23 202-224 51-73 (81)
55 3sja_C Golgi to ER traffic pro 22.2 1.3E+02 0.0043 21.0 4.3 24 155-178 4-27 (65)
56 1yke_B RNA polymerase II holoe 21.7 3.1E+02 0.011 21.9 8.6 37 199-235 89-125 (151)
57 3okq_A BUD site selection prot 20.7 3.3E+02 0.011 21.8 8.7 35 199-233 65-100 (141)
58 3nmd_A CGMP dependent protein 20.5 2.1E+02 0.0072 20.3 5.3 18 204-221 35-52 (72)
No 1
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=3.4e-46 Score=355.43 Aligned_cols=158 Identities=32% Similarity=0.468 Sum_probs=140.3
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|++... ..+....|+|+|||| |||..++++.|.|++||++||+||++||+|
T Consensus 193 ~~~~T~~N~~SSRSH~if~i~v~~~~~------~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~v 266 (369)
T 3cob_A 193 HTTGTLMNEQSSRSHLIVSVIIESTNL------QTQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDV 266 (369)
T ss_dssp CCCSCCTTCHHHHSEEEEEEEEEEEET------TTCCEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHH
T ss_pred eeecccCCCCCCcceEEEEEEEEEecC------CCCcEEEEEEEEEeCCCCCcccccCccchhhHHHHHHHHHHHHHHHH
Confidence 589999999999999999999998543 234567899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccccccccccCCccHHHH
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPTVNEDPNTRII 159 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~~n~~~~~~~i 159 (288)
|.+|++ +..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|||+|+|+|.+|+++ ..+
T Consensus 267 I~aL~~----~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~~--~ei 340 (369)
T 3cob_A 267 ISALSS----GNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS--KEV 340 (369)
T ss_dssp HHHHHT----TCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEEC--HHH
T ss_pred HHHHhc----CCCcCCCcCCHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhcccCCcccCCH--HHH
Confidence 999987 56799999999999999999999999999999999999999999999999999999999999988 334
Q ss_pred HHHHHHHHHHHH
Q psy15556 160 RELHDEITKLKA 171 (288)
Q Consensus 160 ~~l~~ei~~L~~ 171 (288)
.+|+.++..+++
T Consensus 341 ~~L~~~l~~~~~ 352 (369)
T 3cob_A 341 ARLKKLVSYWKE 352 (369)
T ss_dssp HHHHHHTTCC--
T ss_pred HHHHHHHHHHHH
Confidence 444444443333
No 2
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=6.1e-46 Score=353.86 Aligned_cols=156 Identities=47% Similarity=0.621 Sum_probs=121.2
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|++.... .++......|+|+|||| |||..++++.|.|++||++||+||++||+|
T Consensus 215 ~~~~T~~N~~SSRSH~If~i~v~~~~~~---~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~v 291 (372)
T 3b6u_A 215 SVGATNMNEHSSRSHAIFVITIECSEVG---LDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNV 291 (372)
T ss_dssp TTTCSSHHHHHHTSEEEEEEEEEEEC--------CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHH
T ss_pred CcccccCCCCCCcceEEEEEEEEEeecC---CCCCcceEEEEEEEEECCCCccccccCcchhhhhhHhhhhhhHHHHHHH
Confidence 5799999999999999999999984431 23345668899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccccccccccCCccHHHH
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPTVNEDPNTRII 159 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~~n~~~~~~~i 159 (288)
|.+|++ ++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|+|+|.+|+++...++
T Consensus 292 I~aL~~---~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~~~~~ 368 (372)
T 3b6u_A 292 ISALVD---GKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKDALL 368 (372)
T ss_dssp HHHHHC---C---CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC-------
T ss_pred HHHHhc---CCCCCCcccccHHHHHHHHhcCCCccEEEEEEeCCcccCHHHHHHHHHHHHHHhhccccceecCChHHHHH
Confidence 999986 34569999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHH
Q psy15556 160 RELH 163 (288)
Q Consensus 160 ~~l~ 163 (288)
++|+
T Consensus 369 ~~~~ 372 (372)
T 3b6u_A 369 REFQ 372 (372)
T ss_dssp ----
T ss_pred HhcC
Confidence 8764
No 3
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=4.6e-46 Score=354.14 Aligned_cols=161 Identities=36% Similarity=0.412 Sum_probs=122.7
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|++... ..+....|+|+|||| |||..++++.|.|++||++||+||++||+|
T Consensus 198 ~~~~T~~N~~SSRSH~if~i~v~~~~~------~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~v 271 (365)
T 2y65_A 198 HIAVTNMNEHSSRSHSVFLINVKQENL------ENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNV 271 (365)
T ss_dssp TTTCSCHHHHHHTSEEEEEEEEEEEET------TTCCEEEEEEEEEECCCCCC----------------CCHHHHHHHHH
T ss_pred ccccccCCCCCCCceEEEEEEEEEEec------CCCCEeEEEEEEEECCCCCcchhcCCcchhHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999998543 224567899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccccccccccCCccH-HH
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPTVNEDPNT-RI 158 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~~n~~~~~-~~ 158 (288)
|.+|++ ++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|+|.|.+|+++.. .+
T Consensus 272 I~aL~~---~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~~~ 348 (365)
T 2y65_A 272 ISALAD---GNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEW 348 (365)
T ss_dssp HHHHHH---CCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSHHH
T ss_pred HHHHhc---CCCCCCccccCHHHHHHHhhcCCCccEEEEEEecCccCCHHHHHHHHHHHHHHhcccCcceeCCCCCHHHH
Confidence 999997 33579999999999999999999999999999999999999999999999999999999999998754 46
Q ss_pred HHHHHHHHHHHHH
Q psy15556 159 IRELHDEITKLKA 171 (288)
Q Consensus 159 i~~l~~ei~~L~~ 171 (288)
+++|++|+++++.
T Consensus 349 ~~~~~~e~~~~~~ 361 (365)
T 2y65_A 349 KRRYEKEKEKNAR 361 (365)
T ss_dssp HHC----------
T ss_pred HHHHHHHHHHHHH
Confidence 6667777666543
No 4
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-45 Score=351.97 Aligned_cols=154 Identities=34% Similarity=0.440 Sum_probs=103.7
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|.|++.... .......|+|+|||| |||..++++.|.|++|+++||+||++||+|
T Consensus 212 ~~~~T~~N~~SSRSH~If~i~v~~~~~~-----~~~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~v 286 (388)
T 3bfn_A 212 TVGATRLNQRSSRSHAVLLVKVDQRERL-----APFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKV 286 (388)
T ss_dssp ---------CGGGSEEEEEEEEEEEESS-----TTCCEEEEEEEEEECCCTTC--------------CCCCHHHHHHHHH
T ss_pred ccccccCCCCCCCCeEEEEEEEEEeccC-----CCCceeEEEEEEEECCCCcccccccCccchhHHHhHhhhhHHHHHHH
Confidence 5899999999999999999999985431 223457899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccccccccccCCccHHHH
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPTVNEDPNTRII 159 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~~n~~~~~~~i 159 (288)
|.+|++ +..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|+|+|.+|++++...+
T Consensus 287 I~aL~~----~~~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~~~~~l 362 (388)
T 3bfn_A 287 VDALNQ----GLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQPHAL 362 (388)
T ss_dssp HHHHHT----TCSCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHHHHHHHCSEEEEC--------------
T ss_pred HHHHhc----CCCCCcCcccHHHHHHHHhhCCCccEEEEEEECCccccHHHHHHHHHHHHHHhhCcCcCcccCCCCHHHH
Confidence 999987 4569999999999999999999999999999999999999999999999999999999999999887766
Q ss_pred HHHHH
Q psy15556 160 RELHD 164 (288)
Q Consensus 160 ~~l~~ 164 (288)
.+++.
T Consensus 363 ~~~k~ 367 (388)
T 3bfn_A 363 GPVKL 367 (388)
T ss_dssp -----
T ss_pred HHHHH
Confidence 54443
No 5
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=2.5e-45 Score=347.37 Aligned_cols=147 Identities=48% Similarity=0.620 Sum_probs=111.3
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|++.... +.......|+|+|||| |||..++++.|.|++||++||+||++||+|
T Consensus 199 ~~~~T~~N~~SSRSH~if~i~v~~~~~~----~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~v 274 (350)
T 2vvg_A 199 HVAATQMNDTSSRSHSIFMVRIECSEVI----ENKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSALGLV 274 (350)
T ss_dssp ----------CTTCEEEEEEEEEEEEC--------CEEEEEEEEEEECCCCCC---------------CTTHHHHHHHHH
T ss_pred ccccccCCCCCCcceEEEEEEEEEeecc----CCCccEEEEEEEEEeCCCCCccccccccHHHHHHHHHHhHHHHHHHHH
Confidence 5899999999999999999999985431 2334567899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccccccccccCCccH
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPTVNEDPNT 156 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~~n~~~~~ 156 (288)
|.+|++ +..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|+|+|.+|+++..
T Consensus 275 I~aL~~----~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~~~ 347 (350)
T 2vvg_A 275 ISKLVE----GATHIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYADRAKQIKNKPRINEDPKD 347 (350)
T ss_dssp HHHHHH----TCSSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSCTT
T ss_pred HHHHHc----CCCCCCccccHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhccccceecCCchh
Confidence 999997 4579999999999999999999999999999999999999999999999999999999999998864
No 6
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=2.5e-44 Score=340.44 Aligned_cols=152 Identities=34% Similarity=0.490 Sum_probs=125.0
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|.|++..... .....+....|+|+|||| |||..++++.|.|++||++||+||++||+|
T Consensus 189 ~~~~T~~N~~SSRSH~if~i~v~~~~~~~-~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~v 267 (349)
T 1t5c_A 189 HYGETKMNQRSSRSHTIFRMILESREKGE-PSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQV 267 (349)
T ss_dssp SSSSSSSSCTTTTCEEEEEEEEEEEECC--------CEEEEEEEEEECCCGGGTC-------CCCSSSCCCHHHHHHHHH
T ss_pred ccccccCCCCCCCceEEEEEEEEEeccCC-CcCcCccEEEEEEEEEECCCCccccccCCccccchhhhHHhHHHHHHHHH
Confidence 58999999999999999999999865421 112335678899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccccccccccCCccHHH
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPTVNEDPNTRI 158 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~~n~~~~~~~ 158 (288)
|.+|++.+ ...||||||||||+||||+|||||+|+||+||||. +++||++||+||+|||+|+|+|++|+++....
T Consensus 268 I~aL~~~~--~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~--~~~ETlsTL~fA~rak~I~n~~~vn~~~~~~~ 342 (349)
T 1t5c_A 268 IKKLSDGQ--VGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKNTPYVNEVSTDEL 342 (349)
T ss_dssp HHHHHHTC--CTTSSCGGGSHHHHHTGGGTTSSSEEEEEEEECTT--CSHHHHHHHHHHHHHTTCCCCCCCCEEC----
T ss_pred HHHHhccC--CCCCCcccccHHHHHHHHhcCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHhhcccCceeccCCCCCC
Confidence 99999732 24699999999999999999999999999999996 59999999999999999999999999886553
No 7
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=9.8e-45 Score=344.49 Aligned_cols=145 Identities=40% Similarity=0.539 Sum_probs=115.8
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|++.... .++......|+|+|||| |||..++++.|.|++|+++||+||++||+|
T Consensus 213 ~~~~T~~N~~SSRSH~if~i~i~~~~~~---~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~v 289 (359)
T 1x88_A 213 TTAATLMNAYSSRSHSVFSVTIHMKETT---IDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRV 289 (359)
T ss_dssp HHHHHHSTTHHHHCEEEEEEEEEEEEEC---TTSCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHH
T ss_pred ccccccCCCCCCCccEEEEEEEEEeccc---CCCCceEEEEEEEEEcCCCCCcccccCCcccchHHHhhhhHHHHHHHHH
Confidence 4789999999999999999999885431 23334567899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccccccccccCC
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPTVNED 153 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~~n~~ 153 (288)
|.+|++ +..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|+|+|.+|++
T Consensus 290 I~aL~~----~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~~ 359 (359)
T 1x88_A 290 ITALVE----RTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQK 359 (359)
T ss_dssp HHHHHT----TCSCCCGGGSHHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC----
T ss_pred HHHHhc----CCCCCccccchHHHHHHHHhCCCCeEEEEEEECCCcccHHHHHHHHHHHHHHhhccCcceeCCC
Confidence 999987 5689999999999999999999999999999999999999999999999999999999999973
No 8
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=3.7e-44 Score=339.99 Aligned_cols=146 Identities=39% Similarity=0.496 Sum_probs=135.6
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|++... ..+....|+|+|||| |||..++++.|.+++||++||+||++||+|
T Consensus 195 ~~~~T~~N~~SSRSH~if~i~v~~~~~------~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~v 268 (355)
T 1goj_A 195 AVAATNMNQESSRSHSIFVITITQKNV------ETGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMV 268 (355)
T ss_dssp HHHHHHTTCCGGGCEEEEEEEEEEEET------TTTEEEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHH
T ss_pred CcccccCCCCCCCceEEEEEEEEEecc------CCCceeeeEEEEEECCCCCcccccccchhhHHHHHhhhhHHHHHHHH
Confidence 478999999999999999999998543 234567899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccccccccccCCccH
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPTVNEDPNT 156 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~~n~~~~~ 156 (288)
|.+|++ ++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|+|+|.+|+++..
T Consensus 269 I~aL~~---~~~~hvPyRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~vn~~~~~ 342 (355)
T 1goj_A 269 INALTD---GKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSP 342 (355)
T ss_dssp HHHHHH---CSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCSSSSC
T ss_pred HHHHhc---CCCCCCCCccCHHHHHHHHHhCCCCcEEEEEEECcccccHHHHHHHHHHHHHHhhccCCceeCCCCCH
Confidence 999987 34579999999999999999999999999999999999999999999999999999999999998754
No 9
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=4.5e-44 Score=347.95 Aligned_cols=154 Identities=43% Similarity=0.586 Sum_probs=113.5
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
+||+|.+|..|||||+||+|.|++..... .........|+|+|||| |||..++++.|.|++||++||+||++||+|
T Consensus 255 ~~~~T~~N~~SSRSH~Ifti~v~~~~~~~--~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~v 332 (443)
T 2owm_A 255 TVASTKMNDTSSRSHAVFTIMLKQIHHDL--ETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRV 332 (443)
T ss_dssp CBCSSSSSCBCTTEEEEEEEEEEEEC---------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHHHH
T ss_pred CcccCcCCCccCCCeEEEEEEEEEeeccc--CCCCcceEEEEEEEEECCCCccccccCCccccccchhhhcHHHHHHHHH
Confidence 58999999999999999999999854311 12234557899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcC------------------CCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHh
Q psy15556 80 ISSLAELSTK------------------KSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRA 141 (288)
Q Consensus 80 I~~L~~~~~~------------------~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~ra 141 (288)
|.+|++.+.. +..||||||||||+||||+|||||+|+||+||||+ +|+||++||+||+||
T Consensus 333 I~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~ra 410 (443)
T 2owm_A 333 IAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQA 410 (443)
T ss_dssp HHHHCC-------------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHH
T ss_pred HHHHhcccccccccccccccccccccccCCCcccCcccHhHHHHHHhhCCCCcEEEEEEeccc--cHHHHHHHHHHHHHH
Confidence 9999874321 23599999999999999999999999999999996 599999999999999
Q ss_pred ccccccccccC-CccHHHH
Q psy15556 142 KNIINKPTVNE-DPNTRII 159 (288)
Q Consensus 142 k~i~~~~~~n~-~~~~~~i 159 (288)
|+|+|+|++|+ ++.....
T Consensus 411 k~I~n~~~vN~~d~~~~~~ 429 (443)
T 2owm_A 411 KRIRTRAVVNQVDGVSAAE 429 (443)
T ss_dssp TTCEECCCCCCC-------
T ss_pred hhccccceecccCCccHHH
Confidence 99999999999 5544433
No 10
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=5.8e-44 Score=339.95 Aligned_cols=150 Identities=48% Similarity=0.656 Sum_probs=115.7
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|.|++.... ..........|+|+|||| |||.+++++.|.|++||++||+||++||+|
T Consensus 204 ~~~~T~~N~~SSRSH~if~i~v~~~~~~--~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~v 281 (366)
T 2zfi_A 204 TVAATNMNETSSRSHAVFNIIFTQKRHD--AETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKV 281 (366)
T ss_dssp TSGGGGTTTHHHHSEEEEEEEEEEEEEC--TTTTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCCcceEEEEEEEEEeccc--CCCCccceeEeEEEEEeCCCCccccccCCCccchhhhhhHhHHHHHHHHH
Confidence 5899999999999999999999985432 112223456799999999 999999999999999999999999999999
Q ss_pred HHHHhhhh--------cCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhcccccccccc
Q psy15556 80 ISSLAELS--------TKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPTVN 151 (288)
Q Consensus 80 I~~L~~~~--------~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~~n 151 (288)
|.+|++.+ .++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|+|+|.++
T Consensus 282 I~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~~~~~ 361 (366)
T 2zfi_A 282 ISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTVSVN 361 (366)
T ss_dssp HHHHHHHC--------------CCGGGSHHHHHTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC---------
T ss_pred HHHHHhcccccccccccccCCcccccccHHHHHHHHHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccCCCCCC
Confidence 99999743 1246799999999999999999999999999999999999999999999999999999999987
Q ss_pred CC
Q psy15556 152 ED 153 (288)
Q Consensus 152 ~~ 153 (288)
..
T Consensus 362 ~~ 363 (366)
T 2zfi_A 362 HH 363 (366)
T ss_dssp --
T ss_pred CC
Confidence 53
No 11
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=5.1e-44 Score=341.02 Aligned_cols=146 Identities=38% Similarity=0.507 Sum_probs=115.4
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCcccccccc-chhhcchhccccchhhHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSIT-GDRLKEGAHINKSLVTLGS 78 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~-g~rl~E~~~IN~SL~~L~~ 78 (288)
++|+|.+|..|||||+||+|.|++... ..+.......|+|+|||| |||..++++. |.|++||.+||+||++||+
T Consensus 223 ~~~~T~~N~~SSRSH~if~i~v~~~~~---~~~~~~~~~~skL~lVDLAGSEr~~~t~~~~g~rl~E~~~INkSL~aLg~ 299 (373)
T 2wbe_C 223 KTATTLMNAQSSRSHTVFSIVVHIREN---GIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGR 299 (373)
T ss_dssp TTTCSCHHHHHHHSEEEEEEEEEECTT---CTTTCCEEEEEEEEEEECCCC--------------------CHHHHHHHH
T ss_pred ccccccCCCCCCCccEEEEEEEEEecC---CCCCCcceeEEEEEEEECCCCCccccccCccccchhHHHHHHHHHHHHHH
Confidence 579999999999999999999987432 123334567899999999 9999999987 9999999999999999999
Q ss_pred HHHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccccccccccCCc
Q psy15556 79 VISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPTVNEDP 154 (288)
Q Consensus 79 vI~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~~n~~~ 154 (288)
||.+|++ +..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|+|+|.+|++.
T Consensus 300 vI~aL~~----~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~n~p~vN~~~ 371 (373)
T 2wbe_C 300 VITALVD----RAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKL 371 (373)
T ss_dssp HHHHHHH----CSSCCCGGGCHHHHHTHHHHHSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEECCCCCEEC
T ss_pred HHHHHHc----CCCcCccccchHHHHHHHHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccccceecccc
Confidence 9999997 56799999999999999999999999999999999999999999999999999999999999864
No 12
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=7.9e-43 Score=330.95 Aligned_cols=139 Identities=40% Similarity=0.576 Sum_probs=98.7
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|+.|||||+||+|+|++.... .+.......|+|+|||| |||..++++.|.|++||.+||+||++||+|
T Consensus 215 ~~~~T~~N~~SSRSH~if~i~v~~~~~~---~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~v 291 (355)
T 3lre_A 215 TQHPTDMNATSSRSHAVFQIYLRQQDKT---ASINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNV 291 (355)
T ss_dssp CBC-----CBCTTCEEEEEEEEEEEETT---SCTTCCCCCEEEEEEECCCCCC-----------------CHHHHHHHHH
T ss_pred CcccccCcCCCCCCcEEEEEEEEEecCC---CCCCCCEEEEEEEEEECCCCCcCcCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999985532 22334567899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccc
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNI 144 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i 144 (288)
|.+|++.+ ++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|
T Consensus 292 I~aL~~~~-~~~~hiPyRdSkLT~lL~dsLgGnskt~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 292 INALADSK-RKNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp HHHHC---------CCGGGSHHHHHTTTTSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred HHHHHhcc-CCCCcCCcccCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 99998743 24569999999999999999999999999999999999999999999999999986
No 13
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=9.9e-43 Score=329.39 Aligned_cols=141 Identities=33% Similarity=0.450 Sum_probs=118.9
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|++... ..+....|+|+|||| |||..++++.|.|++||++||+||++||+|
T Consensus 204 ~~~~T~~N~~SSRSH~if~i~v~~~~~------~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~v 277 (347)
T 1f9v_A 204 STASTASNEHSSASHSIFIIHLSGSNA------KTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDV 277 (347)
T ss_dssp --------CCGGGSEEEEEEEEEEECC--------CCEEEEEEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeccCCCCCCCceEEEEEEEEEecC------CCCceeeeEEEEEECCCCccccccccchhhhHHHHHHhHHHHHHHHH
Confidence 589999999999999999999988443 234567899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhcccccccc
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPT 149 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~ 149 (288)
|.+|++.+ ++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|+++|+..+.
T Consensus 278 I~aL~~~~-~~~~hiPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~r~~~i~~~~r 346 (347)
T 1f9v_A 278 IHALGQPD-STKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 346 (347)
T ss_dssp HHHHTSCC----CCCCGGGSHHHHHHHHHHSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCTTTC--
T ss_pred HHHHhccc-CCCCcCccccCHHHHHHHHHhCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhhccCCC
Confidence 99998732 1247999999999999999999999999999999999999999999999999999988763
No 14
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=2.1e-42 Score=327.40 Aligned_cols=140 Identities=33% Similarity=0.457 Sum_probs=113.1
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|++... ..+....|+|+|||| |||..++++.|.|++||.+||+||++||+|
T Consensus 207 ~~~~T~~N~~SSRSH~if~i~v~~~~~------~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~v 280 (349)
T 3t0q_A 207 STAATRSNERSSRSHSVFMVHINGRNL------HTGETSQGKLNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGDV 280 (349)
T ss_dssp --------CTGGGSEEEEEEEEEEEET------TTCCEEEEEEEEEECCCCCCCC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCcceEEEEEEEEEec------CCCCeeEEEEEEEeCCCCCccccccCccccchhHHhhhHhHHHHHHH
Confidence 579999999999999999999998543 234567899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccccccc
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKP 148 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~ 148 (288)
|.+|++.+. +..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|++.|+..+
T Consensus 281 I~aL~~~~~-~~~hiPyRdSkLT~lLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~ik~~~ 348 (349)
T 3t0q_A 281 IYALNTPDA-GKRYIPFRNSKLTYLLQYSLVGDSKTLMFVNIPPDPNHISETLNSLRFASKVNSTKIAK 348 (349)
T ss_dssp HHHHHSTTG-GGSCCCGGGSHHHHHHGGGSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHHC-----
T ss_pred HHHHhcccC-CCCcCCCcCCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhhhcccCC
Confidence 999987322 23599999999999999999999999999999999999999999999999999997654
No 15
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=1.2e-42 Score=326.21 Aligned_cols=133 Identities=41% Similarity=0.489 Sum_probs=124.4
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|++... ..+....|+|+|||| |||..++++.|.|++||++||+||++||+|
T Consensus 191 ~~~~T~~N~~SSRSH~if~i~v~~~~~------~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~v 264 (325)
T 1bg2_A 191 HVAVTNMNEHSSRSHSIFLINVKQENT------QTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNV 264 (325)
T ss_dssp TTTCSCHHHHHHHSEEEEEEEEEEEET------TTCCEEEEEEEEEECCCSCCCCCCSSSCTTSCCCCCCCHHHHHHHHH
T ss_pred ceeecCCCCCCCCCeEEEEEEEEEEec------CCCcEEEEEEEEEECCCCCcccccCCccccchHHHHHHHHHHHHHHH
Confidence 579999999999999999999998543 224567899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccc
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNI 144 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i 144 (288)
|.+|++ +..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|
T Consensus 265 I~aL~~----~~~hvPyRdSkLT~lLqdsLgGns~t~mia~vsP~~~~~~ETl~TL~fa~rak~I 325 (325)
T 1bg2_A 265 ISALAE----GSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTI 325 (325)
T ss_dssp HHHHHT----TCSCCCGGGSHHHHHGGGTSSSSCEEEEEEEECCBGGGHHHHHHHHHHHHTSCCC
T ss_pred HHHHHc----CCCCCcccccHHHHHHHHHhCCCCcEEEEEEECCccccHHHHHHHHHHHHHhccC
Confidence 999987 5679999999999999999999999999999999999999999999999999986
No 16
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=2e-42 Score=328.64 Aligned_cols=140 Identities=30% Similarity=0.358 Sum_probs=119.6
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccc-hhhcchhccccchhhHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITG-DRLKEGAHINKSLVTLGS 78 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g-~rl~E~~~IN~SL~~L~~ 78 (288)
++|+|.+|+.|||||+||+|.|++.. .....|+|+|||| |||..++++.| .+++||++||+||++||+
T Consensus 199 ~~~~T~~N~~SSRSH~if~i~v~~~~---------~~~~~skL~lVDLAGSEr~~~t~~~~~~~~~E~~~INkSL~aLg~ 269 (360)
T 1ry6_A 199 KIGVNSQNDESSRSHAILNIDLKDIN---------KNTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKE 269 (360)
T ss_dssp HHCTTCCTTGGGGSEEEEEEEEEETT---------TTEEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccccCCCccceEEEEEEEEecc---------CCcceeEEEEEECCCCccccccccccccchHHHHHHHHHHHHHHH
Confidence 47899999999999999999998722 2356799999999 99999998876 578999999999999999
Q ss_pred HHHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccccccccccCCc
Q psy15556 79 VISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPTVNEDP 154 (288)
Q Consensus 79 vI~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~~n~~~ 154 (288)
||.+|++ +..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|+|.|+.|...
T Consensus 270 vI~aL~~----~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~i~n~~~~~~~~ 341 (360)
T 1ry6_A 270 CIRAMDS----DKNHIPFRDSELTKVLRDIFVGKSKSIMIANISPTISCCEQTLNTLRYSSRVKNKGNSKLEGKPI 341 (360)
T ss_dssp HHHHHTT----STTSCCGGGCHHHHHTGGGGSSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC-----------
T ss_pred HHHHHhc----CCCCCccccCHHHHHHHHHhCCCCeEEEEEEeCCCcccHHHHHHHHHHHHHHhhcccCcccCCCC
Confidence 9999976 56799999999999999999999999999999999999999999999999999999977666543
No 17
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.7e-43 Score=330.97 Aligned_cols=136 Identities=29% Similarity=0.398 Sum_probs=103.7
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|++... ....+....|+|+|||| |||..++++.|.|++|+.+||+||++||+|
T Consensus 222 ~~~~T~~N~~SSRSH~if~i~i~~~~~----~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~~Lg~v 297 (359)
T 3nwn_A 222 IIASHTMNKNSSRSHCIFTIYLEAHSR----TLSEEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQA 297 (359)
T ss_dssp HHHHHHHTCCGGGCEEEEEEEEEEC-----------CCEEEEEEEEECCCCC----------------CCSTHHHHHHHH
T ss_pred ccccccCccccCcceEEEEEEEEeecc----cccCcccccccceeeeccccccccccCCchhHHHhhhhhcccHHHHHHH
Confidence 478999999999999999999988543 22334567899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccc
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNI 144 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i 144 (288)
|.+|++ ++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|
T Consensus 298 I~aL~~---~~~~hVPYRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETlsTL~fA~rak~I 359 (359)
T 3nwn_A 298 IIALGD---QKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 359 (359)
T ss_dssp HHHHHC--------CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred HHHHHh---cCCCcCCcccCHHHHHHHHhcCCCccEEEEEEeCCchhhHHHHHHHHHHHHHHcCC
Confidence 999986 34569999999999999999999999999999999999999999999999999986
No 18
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.9e-42 Score=324.22 Aligned_cols=134 Identities=36% Similarity=0.498 Sum_probs=117.3
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|++... ..+....|+|+|||| |||..++++.|.|++|+++||+||++||+|
T Consensus 194 ~~~~T~~N~~SSRSH~if~i~v~~~~~------~~~~~~~skL~lVDLAGSEr~~~t~~~g~r~~E~~~IN~SL~aLg~v 267 (330)
T 2h58_A 194 TTEFTNLNEHSSRSHALLIVTVRGVDC------STGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDV 267 (330)
T ss_dssp TCTTCCSCSCGGGSEEEEEEEEEEEET------TTTEEEEEEEEEEECCCCCCCC------HHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCcCCccEEEEEEEEEEec------CCCcEEEEEEEEEeCCCCCcccccCCchhhhHHHHHhhHhHHHHHHH
Confidence 589999999999999999999988543 235567899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhcccc
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNII 145 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~ 145 (288)
|.+|++ +..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|+
T Consensus 268 I~aL~~----~~~hvPyRdSkLT~lL~dsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~i~ 329 (330)
T 2h58_A 268 IAALRS----RQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVE 329 (330)
T ss_dssp HHHHHT----TCSCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC---
T ss_pred HHHHhc----CCCCCcccccHHHHHHHHHhCCCceEEEEEEeCCccccHHHHHHHHHHHHHHhhCc
Confidence 999986 56799999999999999999999999999999999999999999999999999985
No 19
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=4.2e-42 Score=325.86 Aligned_cols=140 Identities=49% Similarity=0.660 Sum_probs=108.7
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|.|++... ...........|+|+|||| |||..++++.|.|++||.+||+||++||+|
T Consensus 206 ~~~~T~~N~~SSRSH~if~i~v~~~~~--~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~v 283 (354)
T 3gbj_A 206 TVAATNMNEESSRSHAVFKITLTHTLY--DVKSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINKSLTTLGLV 283 (354)
T ss_dssp ----------CTTSEEEEEEEEEEEEE--CTTSCEEEEEEEEEEEEECCCCCCCCCCC------CHHHHHHHHHHHHHHH
T ss_pred CeeecCCCCCCCcccEEEEEEEEEEec--ccCCCCCCeeEEEEEEEECCCCCchhhcCCccccchhHHHhhHHHHHHHHH
Confidence 589999999999999999999998543 1122334457899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhc--CCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhcc
Q psy15556 80 ISSLAELST--KKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKN 143 (288)
Q Consensus 80 I~~L~~~~~--~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~ 143 (288)
|.+|++.+. ++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||.+|+.
T Consensus 284 I~aL~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLr~a~~~~~ 349 (354)
T 3gbj_A 284 ISALADQSAGKNKNKFVPYRDSVLTWLLKDSLGGNSKTAMVATVSPAADNYDETLSTLRYADRAKH 349 (354)
T ss_dssp HHHHHHC------CCCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC-
T ss_pred HHHHHhhhcccCCCCcccccccHHHHHHHHHhCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHhhh
Confidence 999997542 3567999999999999999999999999999999999999999999999999985
No 20
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=4.6e-42 Score=324.55 Aligned_cols=140 Identities=41% Similarity=0.587 Sum_probs=102.8
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeec--CCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWS--HGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLG 77 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s--~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~ 77 (288)
++|+|.+|..|||||+||+|+|++...... ..+..+....|+|+|||| |||..++++.|.|++|+.+||+||++||
T Consensus 201 ~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg 280 (344)
T 4a14_A 201 HTGATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALG 280 (344)
T ss_dssp HC------CCGGGSEEEEEEEEEEEC------------CEEEEEEEEEECCCCCCC--------------CCCSHHHHHH
T ss_pred ccCcchhhhcccccceEEEEEeeeCCCCcccCCCccccceeeeeeeEEecccchhhcccCCchhhhhhheeechhHHhhh
Confidence 479999999999999999999998654221 112345678899999999 9999999999999999999999999999
Q ss_pred HHHHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhc
Q psy15556 78 SVISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAK 142 (288)
Q Consensus 78 ~vI~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak 142 (288)
+||.+|++.+ ++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||
T Consensus 281 ~vI~aL~~~~-~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~TL~fA~rAk 344 (344)
T 4a14_A 281 NVISALGDPQ-RRGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLNYASRAQ 344 (344)
T ss_dssp HHHHHHTCTT-TTTSCCCGGGCHHHHHTTTSSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC
T ss_pred hHHHhcCCcc-ccCCCCCcchhhHHHHhHhhcCCCcceEEEEEeCCCccchhHHhhhhhhhhhcC
Confidence 9999998733 345699999999999999999999999999999999999999999999999996
No 21
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.8e-42 Score=326.51 Aligned_cols=133 Identities=36% Similarity=0.489 Sum_probs=97.8
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccc----hhhcchhccccchhh
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITG----DRLKEGAHINKSLVT 75 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g----~rl~E~~~IN~SL~~ 75 (288)
++|+|.+|..|||||+||+|.|++... ..+....|+|+|||| |||.+++++.| .|++||.+||+||++
T Consensus 238 ~~~~T~~N~~SSRSH~Ifti~v~~~~~------~~~~~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~a 311 (376)
T 2rep_A 238 AVARTAQNERSSRSHSVFQLQISGEHS------SRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLST 311 (376)
T ss_dssp HHCC-----CGGGSEEEEEEEEEEEES------SSCCEEEEEEEEEECCCCC------------------------CHHH
T ss_pred ccccccCCCCCCCceEEEEEEEEEEec------CCCcEEEeEEEEEECCCCcccccccccCccccchhhHHhHhhHHHHH
Confidence 479999999999999999999998543 224557899999999 99999999999 999999999999999
Q ss_pred HHHHHHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccc
Q psy15556 76 LGSVISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNI 144 (288)
Q Consensus 76 L~~vI~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i 144 (288)
||+||.+|++ +..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|++++
T Consensus 312 Lg~vI~aL~~----~~~hVPYRdSkLT~LLqdsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 312 LGLVIMALSN----KESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC 376 (376)
T ss_dssp HHHHHHHHHT----TCSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHhc----CCCccCCcCCHHHHHHHHhhCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHHhcC
Confidence 9999999987 5679999999999999999999999999999999999999999999999999864
No 22
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=1.9e-42 Score=328.45 Aligned_cols=136 Identities=29% Similarity=0.399 Sum_probs=103.4
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|.|++.... ...+....|+|+|||| |||..++++.|.|++|+.+||+||++||+|
T Consensus 221 ~~~~T~~N~~SSRSH~If~i~v~~~~~~----~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~v 296 (358)
T 2nr8_A 221 IIASHTMNKNSSRSHCIFTIYLEAHSRT----LSEEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQA 296 (358)
T ss_dssp HHHHHHHTCCGGGCEEEEEEEEEEC-----------CCEEEEEEEEECCCCC----------------CCSTHHHHHHHH
T ss_pred ccccccCCCCCCcCeEEEEEEEEEEecc----CCCCCEEEEEEEEEECCCCCcccccCCchhhHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999985432 2234556899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccc
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNI 144 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i 144 (288)
|.+|++ ++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||.|
T Consensus 297 I~aL~~---~~~~hiPyRdSkLT~LLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~Rak~I 358 (358)
T 2nr8_A 297 IIALGD---QKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 358 (358)
T ss_dssp HHHHHC--------CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred HHHHHh---CCCCcCCCccCHHHHHHHHhcCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 999986 24569999999999999999999999999999999999999999999999999986
No 23
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-42 Score=330.00 Aligned_cols=141 Identities=33% Similarity=0.460 Sum_probs=121.8
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|++... ..+....|+|+|||| |||..++++.|.|++||.+||+||++||+|
T Consensus 260 ~~~~T~~N~~SSRSH~if~i~v~~~~~------~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~v 333 (403)
T 4etp_A 260 STASTASNEHSSRSHSIFIIHLSGSNA------KTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSALGDV 333 (403)
T ss_dssp ----CHHHHHHHTSEEEEEEEEEEEET------TTCCEEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCcccCCcccEEEEEEEEeec------CCCCeeEEEEEEEECCCCccccccCChhHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999988543 234557899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhcccccccc
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPT 149 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~ 149 (288)
|.+|++.+ ++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|+++|+..|.
T Consensus 334 I~aL~~~~-~~~~hiPyRdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~~~~~r 402 (403)
T 4etp_A 334 IHALGQPD-STKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 402 (403)
T ss_dssp HHHHTSSC-TTTSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHhccc-CCCCcCCcccchHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHHhhcccCCC
Confidence 99998732 2346999999999999999999999999999999999999999999999999999987663
No 24
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=1.4e-41 Score=321.13 Aligned_cols=131 Identities=31% Similarity=0.362 Sum_probs=100.5
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|++. ...|+|+|||| |||..++++.|.+++||.+||+||++||+|
T Consensus 207 ~~~~T~~N~~SSRSH~Ifti~v~~~------------~~~skl~lVDLAGSEr~~~t~~~g~r~~E~~~INkSL~aLg~v 274 (344)
T 3dc4_A 207 RVRPTNMNSNSSRSHAIVTIHVKSK------------THHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKV 274 (344)
T ss_dssp C----------CCEEEEEEEEEECS------------SCEEEEEEEECCCCCCC-------------CCSCCHHHHHHHH
T ss_pred ccccccCCCCCCCceEEEEEEEEec------------CcEEEEEEEECCCCccccccccccchhHHHHHHhHhHHHHHHH
Confidence 5899999999999999999999762 24699999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccccccc
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKP 148 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~ 148 (288)
|.+|++ +..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+||+.....|
T Consensus 275 I~aL~~----~~~hiPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTL~fA~ra~~~~~~~ 339 (344)
T 3dc4_A 275 VMSMAA----GHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKAAALEH 339 (344)
T ss_dssp HHHHHT----TCSSCCGGGSHHHHHTTTTSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHhc----cCCcCCccccHHHHHHHHHhCCCCEEEEEEEeCCchhhHHHHHHHHHHHHHHhhcCCCC
Confidence 999987 56799999999999999999999999999999999999999999999999999986655
No 25
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=1.8e-40 Score=317.36 Aligned_cols=131 Identities=36% Similarity=0.504 Sum_probs=98.2
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCcccccc-ccchhhcchhccccchhhHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYS-ITGDRLKEGAHINKSLVTLGS 78 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~-~~g~rl~E~~~IN~SL~~L~~ 78 (288)
++|+|.+|..|||||+||+|.|++. ....|+|+|||| |||..+++ +.|.+++|+++||+||++||+
T Consensus 251 ~~~~T~~N~~SSRSH~Ifti~v~~~-----------~~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~ 319 (387)
T 2heh_A 251 TSGQTFANSNSSRSHACFQIILRAK-----------GRMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKE 319 (387)
T ss_dssp ---------CGGGSEEEEEEEEESS-----------SSEEEEEEEEECCCCC---------------CHHHHHHHHHHHH
T ss_pred CcccCcCcCCcccceEEEEEEEEEC-----------CeeeeEEEEEECCCCccccccccccccchhhHHHHhHHHHHHHH
Confidence 5899999999999999999999872 136799999999 99998886 467889999999999999999
Q ss_pred HHHHHhhhhcCCCccccCCCcchhhhhccc-CCCCcceEEEeecCCCCCChHhHHHHHHHHHHhcccccc
Q psy15556 79 VISSLAELSTKKSTFIPYRDSVLTWLLKDS-LGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINK 147 (288)
Q Consensus 79 vI~~L~~~~~~~~~~iPyRdSkLT~lL~d~-LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~ 147 (288)
||.+|++ +..||||||||||+||||+ |||||+|+||+||||+..+++||++||+||+|||+|++.
T Consensus 320 vI~aL~~----~~~hvPYRdSKLTrlLqdsllGgnskT~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~ 385 (387)
T 2heh_A 320 CIRALGQ----NKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYTLNTLRYADRVKELSPH 385 (387)
T ss_dssp HHHHHHT----TCSCCCGGGSHHHHHTGGGGSSTTEEEEEEEEECCBGGGHHHHHHHHHHHHHHCC----
T ss_pred HHHHHhc----CCCCCCccccHHHHHHhhhccCCCCeEEEEEEeCCccchHHHHHHHHHHHHHhccCcCC
Confidence 9999986 5679999999999999999 699999999999999999999999999999999999764
No 26
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=2.5e-40 Score=338.61 Aligned_cols=135 Identities=39% Similarity=0.517 Sum_probs=107.2
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++++|.+|..|||||+||+|+|++... ..+....|+|+|||| |||..++++.|.|++|+++||+||++||+|
T Consensus 576 ~~~~t~~n~~ssRSH~i~~i~~~~~~~------~~~~~~~~~l~lvDLAGsEr~~~~~~~g~~~~E~~~IN~sL~~L~~v 649 (715)
T 4h1g_A 576 STAATKSNDHSSRSHSIFIIDLQGYNS------LTKESSYGTLNLIDLAGSERLNNSRAEGDRLKETQAINKSLSCLGDV 649 (715)
T ss_dssp ---------CGGGSEEEEEEEEEEEET------TTCCEEEEEEEEEECCCCCC---------CHHHHHHHHHHHHHHHHH
T ss_pred CcccccccCccccccEEEEEEEEEEec------CCCCEeEEEEEEEeCCCcccccccCChhHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999988543 234567899999999 999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhcccc
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNII 145 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~ 145 (288)
|.+|+. ++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|+
T Consensus 650 i~al~~---~~~~~vpyR~SkLT~lL~~slggn~~t~~i~~isp~~~~~~et~~tL~fa~r~~~i~ 712 (715)
T 4h1g_A 650 IHSLNL---KDGSHVPYRNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETINSLRFATKVNNTR 712 (715)
T ss_dssp HHHHHH---CSCCCCCGGGCHHHHHTGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC--
T ss_pred HHHHhh---cCCCcCCCccCHHHHHHHhhcCCCceEEEEEEECCChhhHHHHHHHHHHHHHhccce
Confidence 999986 356799999999999999999999999999999999999999999999999999996
No 27
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=2.5e-40 Score=318.26 Aligned_cols=133 Identities=36% Similarity=0.497 Sum_probs=98.3
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCcccccc-ccchhhcchhccccchhhHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYS-ITGDRLKEGAHINKSLVTLGS 78 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~-~~g~rl~E~~~IN~SL~~L~~ 78 (288)
++|+|.+|..|||||+||+|.|++. ....|+|+|||| |||..+++ +.|.+++|+++||+||++||+
T Consensus 271 ~~~~T~~N~~SSRSH~Ifti~v~~~-----------~~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~ 339 (410)
T 1v8k_A 271 TSGQTFANSNSSRSHACFQILLRTK-----------GRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKE 339 (410)
T ss_dssp C--------CCCSSEEEEEEEEESS-----------SSEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHH
T ss_pred CcccccCCCCCCCceEEEEEEEEeC-----------CcceeEEEEEECCCccccccccccccchhHHHHHHhHHHHHHHH
Confidence 5899999999999999999999872 136799999999 99998886 467889999999999999999
Q ss_pred HHHHHhhhhcCCCccccCCCcchhhhhccc-CCCCcceEEEeecCCCCCChHhHHHHHHHHHHhcccccccc
Q psy15556 79 VISSLAELSTKKSTFIPYRDSVLTWLLKDS-LGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPT 149 (288)
Q Consensus 79 vI~~L~~~~~~~~~~iPyRdSkLT~lL~d~-LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~ 149 (288)
||.+|++ +..||||||||||+||||+ |||||+|+||+||||+..+++||++||+||+|||.|..+|-
T Consensus 340 vI~aL~~----~~~hIPYRdSKLTrLLqdsllGgnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~i~~~~~ 407 (410)
T 1v8k_A 340 CIRALGQ----NKAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELSHHHH 407 (410)
T ss_dssp HHHHHTC----------CCCCHHHHHTTHHHHSSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTTC----
T ss_pred HHHHHhc----CCCCCCcccchhHHHHhhcccCCCceEEEEEEeCCccccHHHHHHHHHHHHHhccCCCCCC
Confidence 9999985 5679999999999999999 59999999999999999999999999999999999977653
No 28
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=7.2e-40 Score=315.85 Aligned_cols=133 Identities=32% Similarity=0.379 Sum_probs=107.6
Q ss_pred ceecccccCCCCCceeEEEEEEEeeeeeecCCCCCCceeeeeeEEeec--CCccccccccchhhcchhccccchhhHHHH
Q psy15556 2 AVGDTMLNGCLTKDKQRFPWFVSGWVTIWSHGDFWGQYLKGLFHLIPQ--YNQGIFYSITGDRLKEGAHINKSLVTLGSV 79 (288)
Q Consensus 2 ~v~~T~~N~~SSRSH~Iftl~V~~~~~~~s~~~~~~~~~~s~l~lVDL--sEr~~~~~~~g~rl~E~~~IN~SL~~L~~v 79 (288)
++|+|.+|..|||||+||+|+|.+... ..+....|+|+|||| |||.. .|.|++||++||+||++||+|
T Consensus 252 ~~~~T~~N~~SSRSH~if~i~v~~~~~------~~~~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~aLg~v 321 (412)
T 3u06_A 252 ATASTAGNERSSRSHAVTKLELIGRHA------EKQEISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNV 321 (412)
T ss_dssp C-----CHHHHTTCEEEEEEEEEEEET------TTTEEEEEEEEEEECCCCCC--------------CTTTHHHHHHHHH
T ss_pred cccccCCCCCCcCceEEEEEEEEEEeC------CCCCEEEEEEEEEECCCCCcCC----ccchhHhHHHHhHHHHHHHHH
Confidence 589999999999999999999988543 234567899999999 99874 578999999999999999999
Q ss_pred HHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhccccccc
Q psy15556 80 ISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKP 148 (288)
Q Consensus 80 I~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~ 148 (288)
|.+|++ +..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|+++|+..+
T Consensus 322 I~aL~~----~~~hiPyRdSkLT~LLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~~~~ 386 (412)
T 3u06_A 322 ILALLQ----KQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTK 386 (412)
T ss_dssp HHHHHT----TCSCCCGGGSHHHHHHGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHhc----cCCCCCccccHHHHHHHHhcCCCceEEEEEEeCCChhhHHHHHHHHHHHHHHhhccccc
Confidence 999986 56799999999999999999999999999999999999999999999999999998543
No 29
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=100.00 E-value=5.1e-34 Score=224.19 Aligned_cols=98 Identities=44% Similarity=0.596 Sum_probs=89.9
Q ss_pred hhccccchhhHHHHHHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhcccc
Q psy15556 66 GAHINKSLVTLGSVISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNII 145 (288)
Q Consensus 66 ~~~IN~SL~~L~~vI~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~ 145 (288)
|++||+||++||+||.+|++ ++..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+||+.|+
T Consensus 1 a~~IN~SL~~Lg~vI~aL~~---~~~~hvPyRdSkLT~lL~dsLgGnskt~mi~~vsp~~~~~~ETl~TL~fA~rak~i~ 77 (100)
T 2kin_B 1 AKNINKSLSALGNVISALAE---GTKTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIK 77 (100)
T ss_dssp CCBSSHHHHHHHHHHHHHHH---TCCSSCCGGGCHHHHHTHHHHHSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCE
T ss_pred CCcchHHHHHHHHHHHHHHh---cCCCCCCCccchHHHHHHHHhcCCCceeEEEEeCcccchHHHHHHHHHHHHHHHhcc
Confidence 57899999999999999987 235799999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCccH-HHHHHHHHHH
Q psy15556 146 NKPTVNEDPNT-RIIRELHDEI 166 (288)
Q Consensus 146 ~~~~~n~~~~~-~~i~~l~~ei 166 (288)
+.|.+|++.+. .++++|++|+
T Consensus 78 ~~~~~n~~~~~~~l~~~~~~e~ 99 (100)
T 2kin_B 78 NTVSVNLELTAEEWKKKYEKEK 99 (100)
T ss_dssp EEECCEEECCHHHHHHHHHHHH
T ss_pred CcceeccCCCHHHHHHHHHHhh
Confidence 99999998764 5677777765
No 30
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.97 E-value=2e-31 Score=215.53 Aligned_cols=94 Identities=46% Similarity=0.626 Sum_probs=84.1
Q ss_pred ccchhhHHHHHHHHhhhhcCCCccccCCCcchhhhhcccCCCCcceEEEeecCCCCCChHhHHHHHHHHHHhcccccccc
Q psy15556 70 NKSLVTLGSVISSLAELSTKKSTFIPYRDSVLTWLLKDSLGGNSKTIMIAAISPADVNYSETLSTLRYANRAKNIINKPT 149 (288)
Q Consensus 70 N~SL~~L~~vI~~L~~~~~~~~~~iPyRdSkLT~lL~d~LgGn~kt~~I~~isp~~~~~~ETlsTL~fa~rak~i~~~~~ 149 (288)
|+||++||+||.+|++ ++..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+||+.|+|.|.
T Consensus 1 N~SL~~Lg~vi~aL~~---~~~~hvPyRdSkLT~lL~dsLggn~~t~~i~~isp~~~~~~eTl~TL~fa~rak~i~n~~~ 77 (117)
T 3kin_B 1 NKSLSALGNVISALAE---GTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVS 77 (117)
T ss_dssp CCHHHHHHHHHHHHHH---SCCSSCCGGGSHHHHHTHHHHHSSSEEEEEEEECCSGGGHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHHHHHHHHHHh---CCCCCCCCcchHHHHHHHHHcCCCccceeeeeeCCCcccHHHHHHHHHHHHHhCcccCCce
Confidence 8999999999999997 3457999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccHH-HHHHHHHHH
Q psy15556 150 VNEDPNTR-IIRELHDEI 166 (288)
Q Consensus 150 ~n~~~~~~-~i~~l~~ei 166 (288)
+|.++... ++++++.|+
T Consensus 78 ~n~~~~~~~l~~~~~~e~ 95 (117)
T 3kin_B 78 VNLELTAEEWKKKYEKEK 95 (117)
T ss_dssp CCBCCCHHHHHHHHHHHH
T ss_pred ecCcCCHHHHHHHHHHHH
Confidence 99987654 344444433
No 31
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=99.68 E-value=7e-17 Score=139.87 Aligned_cols=81 Identities=28% Similarity=0.443 Sum_probs=70.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HhccccccCC--cceeeCCCCCceeecCCCccccceEEE
Q psy15556 197 QPQMLAALQAKQEQEKVLTEEWAEKWRETQKILQEQQ----ALGLRMGKDG--TGVVLDSDRPHLVRIDDDLYSTGVTLY 270 (288)
Q Consensus 197 ~~~~~~~l~~~~~~~~~l~~~~~e~~~e~~~~~~e~~----~l~~~~~~~~--~~~~~~~~~p~LvnlneDp~~s~~~~y 270 (288)
.+++.++|++.++++++|+++|++||++++++.++++ ++|+.+.+++ +|+..|++.|||||||+||+||+|++|
T Consensus 7 ~ee~~e~L~~~e~l~~el~~tWeeKl~~te~~~~e~~~~l~~~gi~~~~~~~~~gv~~~~~~PhLvnLn~Dp~ls~~l~y 86 (184)
T 4egx_A 7 SEEAIERLKETEKIIAELNETWEEKLRRTEAIRMEREALLAEMGVAMREDGGTLGVFSPKKTPHLVNLNEDPLMSECLLY 86 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEETTTEEEEEECCSSSCEEEECCCCTTCSSCSEE
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCcchhhcccccceecCCCCceEEeccCCcccCceEEE
Confidence 3567899999999999999999999999999887764 4577766665 689999999999999999999999999
Q ss_pred EecCCcc
Q psy15556 271 DSVLPSF 277 (288)
Q Consensus 271 ~~~~~~~ 277 (288)
+|+.+.|
T Consensus 87 ~L~~g~t 93 (184)
T 4egx_A 87 YIKDGIT 93 (184)
T ss_dssp ECCSEEE
T ss_pred EECCCcC
Confidence 9987743
No 32
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.14 E-value=3.6e-11 Score=101.01 Aligned_cols=59 Identities=29% Similarity=0.419 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccccccCC--cceeeCCCCCceeecCCCccccceEEEEecCCcc
Q psy15556 217 EWAEKWRETQKILQEQQALGLRMGKDG--TGVVLDSDRPHLVRIDDDLYSTGVTLYDSVLPSF 277 (288)
Q Consensus 217 ~~~e~~~e~~~~~~e~~~l~~~~~~~~--~~~~~~~~~p~LvnlneDp~~s~~~~y~~~~~~~ 277 (288)
+|.|+++..++.. .+++++.+.++| +|+..|++.|||||||+||++|++++|+|+.+.+
T Consensus 3 e~te~i~~ere~~--l~e~gi~~~~~g~~~gv~~~~~~PhLvnLn~Dp~ls~~lvy~L~~g~t 63 (154)
T 4ejq_A 3 EFTEAIRMEREAL--LAEMGVAMREDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGIT 63 (154)
T ss_dssp HHHHHHHHHHHHH--HHHTTEEECTTSSEEEECCCSSSCEEEECCCCTTCSSEEEEECCSEEE
T ss_pred HHHHHHHHHHHHH--HHHcCCeEeccCceeeeecCCCCceEEEecCCcccCceEEEEeCCCCE
Confidence 4555555443322 236888887776 6889999999999999999999999999987643
No 33
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=98.25 E-value=2.2e-07 Score=75.23 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=21.7
Q ss_pred cCCcceeeCCCCCceeecCCCccccceEEEEecCC
Q psy15556 241 KDGTGVVLDSDRPHLVRIDDDLYSTGVTLYDSVLP 275 (288)
Q Consensus 241 ~~~~~~~~~~~~p~LvnlneDp~~s~~~~y~~~~~ 275 (288)
..+.|+.++.+.|||||||+||+++++++|+|+..
T Consensus 15 ~~~~gi~~~~~~PhLvnLn~Dp~~s~~l~y~L~~~ 49 (124)
T 3fm8_A 15 YFQGGIKVGDDKCFLVNLNADPALNELLVYYLKEH 49 (124)
T ss_dssp ------------CEEEETTCCTTSSCCCEEECCSE
T ss_pred ccCCcEeecCCccEEEEeCCCCccCceEEEECCCC
Confidence 34678999999999999999999999999999764
No 34
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=95.97 E-value=0.0028 Score=50.17 Aligned_cols=32 Identities=25% Similarity=0.265 Sum_probs=28.2
Q ss_pred cceeeCCCCCceeecCCCccccc--eEEEEecCC
Q psy15556 244 TGVVLDSDRPHLVRIDDDLYSTG--VTLYDSVLP 275 (288)
Q Consensus 244 ~~~~~~~~~p~LvnlneDp~~s~--~~~y~~~~~ 275 (288)
.|+..|++.|||+||++||.+|+ ...|.|..+
T Consensus 3 ~g~~~~~~~p~Lv~l~~d~~~s~~~~~~~~L~~~ 36 (120)
T 1wln_A 3 SGSSGPEKLPYLVELSPDGSDSRDKPKLYRLQLS 36 (120)
T ss_dssp CCCCCGGGCCEEEEECSSSCCCSSCCCEEECCSE
T ss_pred ccccCCCCcCEEEEeCCChhhccCccEEEEECCC
Confidence 67888999999999999999985 888988755
No 35
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=78.14 E-value=23 Score=27.79 Aligned_cols=75 Identities=21% Similarity=0.246 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHH-hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15556 156 TRIIRELHDEITKLKAMLTSVKVNSVARQQLLSKAQQ-TQGNQPQMLAALQAKQEQEKVLTEEWAEKWRETQKILQ 230 (288)
Q Consensus 156 ~~~i~~l~~ei~~L~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~l~~~~~e~~~e~~~~~~ 230 (288)
...+.+++..|..|+.++..++.........+..... ......+....+...+..+..+..+++..+.+.+..+.
T Consensus 35 k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~Lln 110 (129)
T 3tnu_B 35 KHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQDMARLLREYQELMN 110 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 4557778888888888887765544333333322221 12223444556666777777777777777777666554
No 36
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=73.13 E-value=22 Score=27.97 Aligned_cols=73 Identities=19% Similarity=0.149 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHH-hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15556 158 IIRELHDEITKLKAMLTSVKVNSVARQQLLSKAQQ-TQGNQPQMLAALQAKQEQEKVLTEEWAEKWRETQKILQ 230 (288)
Q Consensus 158 ~i~~l~~ei~~L~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~l~~~~~e~~~e~~~~~~ 230 (288)
.+.+++..|..|+.++..+..........+..... ......+....+...+..+..+..+++..+.+.+..+.
T Consensus 39 Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~em~~ql~EYq~Ll~ 112 (131)
T 3tnu_A 39 EISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCEMEQQNQEYKILLD 112 (131)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666777777777776654433322222222211 12223344556666777777777777777777666544
No 37
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=70.14 E-value=37 Score=26.57 Aligned_cols=29 Identities=38% Similarity=0.539 Sum_probs=23.7
Q ss_pred cCCccHHHHHHHHHHHHHHHHHHhhhhhc
Q psy15556 151 NEDPNTRIIRELHDEITKLKAMLTSVKVN 179 (288)
Q Consensus 151 n~~~~~~~i~~l~~ei~~L~~~l~~~~~~ 179 (288)
..++.+.+|..|..||+.|+.++..+...
T Consensus 9 ~~d~rD~~Ie~Lkreie~lk~ele~l~~E 37 (120)
T 3i00_A 9 NKDEKDHLIERLYREISGLKAQLENMKTE 37 (120)
T ss_dssp -CCTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677889999999999999999877543
No 38
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=67.33 E-value=33 Score=25.22 Aligned_cols=31 Identities=16% Similarity=0.261 Sum_probs=19.3
Q ss_pred ccccccCCccHHHHHHHHHHHHHHHHHHhhh
Q psy15556 146 NKPTVNEDPNTRIIRELHDEITKLKAMLTSV 176 (288)
Q Consensus 146 ~~~~~n~~~~~~~i~~l~~ei~~L~~~l~~~ 176 (288)
.+|..+.......+..+.+++..++..+...
T Consensus 3 VKPLL~~~~~eeEm~~~eeel~~lke~l~k~ 33 (89)
T 3bas_A 3 HMPLLSIARQEEEMKEQLKQMDKMKEDLAKT 33 (89)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 4566676777778888889999998888644
No 39
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=65.12 E-value=37 Score=24.66 Aligned_cols=63 Identities=14% Similarity=0.183 Sum_probs=35.5
Q ss_pred cHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15556 155 NTRIIRELHDEITKLKAMLTSVKVNSVARQQLLSKAQQTQGNQPQMLAALQAKQEQEKVLTEEWAEKWRE 224 (288)
Q Consensus 155 ~~~~i~~l~~ei~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~e~~~e 224 (288)
.+++-+++++.+.+.+++|..++........ -+.....++.+|+..+..+..-.+.+.++.++
T Consensus 9 eDKLRrrl~E~~~q~qaEl~sLrrT~~EL~~-------G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~E 71 (78)
T 3iv1_A 9 SDKLRWRMKEEMDRAQAELNALKRTEEDLKK-------GHQKLEEMVTRLDQEVAEVDKNIELLKKKDEE 71 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788889999999998877654332111 11123455555555554444444444444433
No 40
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=63.58 E-value=55 Score=26.63 Aligned_cols=88 Identities=14% Similarity=0.163 Sum_probs=47.3
Q ss_pred cccccccCCccHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHH--hcCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15556 145 INKPTVNEDPNTRIIRELHDEITKLKAMLTSVKVNSVARQQLLSKAQQ--TQGNQPQMLAALQAKQEQEKVLTEEWAEKW 222 (288)
Q Consensus 145 ~~~~~~n~~~~~~~i~~l~~ei~~L~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~l~~~~~e~~ 222 (288)
..+.++-+.....+.++|.+.+.++..++.++..... ..+..... .....+...+++.....+...-.....++.
T Consensus 17 ~VK~iVTe~~Ke~l~~~l~~~i~q~d~elqQLefq~k---r~~~e~~~q~~~~~~p~~~~qi~~iq~q~~~ek~~r~e~k 93 (150)
T 4dci_A 17 TVRAVVTPTWKEEAEREISNGIANADQQLAQLEQEGQ---TVVDQVRRQSANPLDPRVQEQVANIQQQVAGKRSELEEQK 93 (150)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345555556678889999999999998887765432 22222221 112224555555554444444444444444
Q ss_pred HHHHHHHHHHHHh
Q psy15556 223 RETQKILQEQQAL 235 (288)
Q Consensus 223 ~e~~~~~~e~~~l 235 (288)
+.....+++-+.|
T Consensus 94 ~~l~~ql~qv~~L 106 (150)
T 4dci_A 94 RNLLQQQAQVREL 106 (150)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcC
Confidence 4444444444444
No 41
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=61.67 E-value=59 Score=31.25 Aligned_cols=24 Identities=4% Similarity=0.044 Sum_probs=10.0
Q ss_pred EeecCCCCCChHhHHHHHHHHHHh
Q psy15556 118 IAAISPADVNYSETLSTLRYANRA 141 (288)
Q Consensus 118 I~~isp~~~~~~ETlsTL~fa~ra 141 (288)
+||-.+........+..+.....+
T Consensus 391 ~cc~~~~~~~~~~~~~~l~~~~~~ 414 (597)
T 3oja_B 391 LCCKESDKPYLDRLLQYIALTSVV 414 (597)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHH
T ss_pred ccccCCCccchhHHHHHhhHHHHh
Confidence 344444433344444444443333
No 42
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=52.17 E-value=65 Score=23.40 Aligned_cols=21 Identities=24% Similarity=0.487 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy15556 199 QMLAALQAKQEQEKVLTEEWA 219 (288)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~ 219 (288)
.+..++.+.+..+..+.+.|.
T Consensus 60 ~l~~~l~~~e~eLe~~~erWe 80 (89)
T 2lw1_A 60 KVLADMAAAEQELEQAFERWE 80 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344555666666666666664
No 43
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=51.49 E-value=63 Score=23.49 Aligned_cols=22 Identities=18% Similarity=0.286 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy15556 205 QAKQEQEKVLTEEWAEKWRETQK 227 (288)
Q Consensus 205 ~~~~~~~~~l~~~~~e~~~e~~~ 227 (288)
.+..+...++. ...++|.+++.
T Consensus 63 ~~l~~~e~eLe-~~~erWeeLe~ 84 (89)
T 2lw1_A 63 ADMAAAEQELE-QAFERWEYLEA 84 (89)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHH
Confidence 33333333333 44467766554
No 44
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=43.46 E-value=40 Score=25.30 Aligned_cols=26 Identities=15% Similarity=0.107 Sum_probs=20.3
Q ss_pred CccHHHHHHHHHHHHHHHHHHhhhhh
Q psy15556 153 DPNTRIIRELHDEITKLKAMLTSVKV 178 (288)
Q Consensus 153 ~~~~~~i~~l~~ei~~L~~~l~~~~~ 178 (288)
.......++++.|+.+|+.++.....
T Consensus 19 s~~a~~~~~lk~E~~~lk~E~~stSa 44 (93)
T 3sjb_C 19 NELSKKYLAKVKERHELKEFNNSISA 44 (93)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred cHhHHHHHHHHHHHHHHHHHHhccch
Confidence 55677788999999999999876544
No 45
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=41.35 E-value=1.4e+02 Score=24.23 Aligned_cols=24 Identities=13% Similarity=0.147 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhc
Q psy15556 156 TRIIRELHDEITKLKAMLTSVKVN 179 (288)
Q Consensus 156 ~~~i~~l~~ei~~L~~~l~~~~~~ 179 (288)
...|+.|+.|+..|+..+..+...
T Consensus 67 ~~~I~~L~~El~~l~~ki~dLeee 90 (152)
T 3a7p_A 67 LNTLAILQKELKSKEQEIRRLKEV 90 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446777777777777776665443
No 46
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=40.45 E-value=2.2e+02 Score=27.41 Aligned_cols=60 Identities=17% Similarity=0.131 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH
Q psy15556 159 IRELHDEITKLKAMLTSVKVNSVARQQLLSKAQQTQGNQPQMLAALQAKQEQEKVLTEEW 218 (288)
Q Consensus 159 i~~l~~ei~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 218 (288)
+.+|.++-..++.+++.++.........+.......++...++++..+..++++.+.++.
T Consensus 35 ~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~ 94 (485)
T 3qne_A 35 IIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKE 94 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444333222222222222333445566666666666665555443
No 47
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=36.73 E-value=2.4e+02 Score=26.64 Aligned_cols=61 Identities=13% Similarity=0.055 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH
Q psy15556 158 IIRELHDEITKLKAMLTSVKVNSVARQQLLSKAQQTQGNQPQMLAALQAKQEQEKVLTEEW 218 (288)
Q Consensus 158 ~i~~l~~ei~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 218 (288)
.+.++.++-..++.+++.++.........+.......++..+++++..+..++++.+.++.
T Consensus 32 ~~~~l~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 92 (455)
T 2dq0_A 32 EILKLDTEWRTKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEV 92 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555555544433222222222222223444555666665555555554443
No 48
>4a1x_C CP5-46-A peptide; hydrolase-peptide complex, unmodified inhibitory peptides; 1.90A {Synthetic construct} PDB: 4a1t_C
Probab=34.53 E-value=23 Score=19.73 Aligned_cols=15 Identities=20% Similarity=0.175 Sum_probs=12.1
Q ss_pred ceEEEEecCCccccc
Q psy15556 266 GVTLYDSVLPSFALH 280 (288)
Q Consensus 266 ~~~~y~~~~~~~~~~ 280 (288)
|.++|.|++|-.|.-
T Consensus 4 grlvylldgpgydpi 18 (26)
T 4a1x_C 4 GRLVYLLDGPGYDPI 18 (26)
T ss_pred ceEEEEecCCCCCce
Confidence 689999999976643
No 49
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=33.51 E-value=1.6e+02 Score=28.77 Aligned_cols=22 Identities=27% Similarity=0.403 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhc
Q psy15556 158 IIRELHDEITKLKAMLTSVKVN 179 (288)
Q Consensus 158 ~i~~l~~ei~~L~~~l~~~~~~ 179 (288)
.-+.+...|++|+.+++.++.+
T Consensus 58 qErDltkrINELKnqLEdlsKn 79 (562)
T 3ghg_A 58 VNQDFTNRINKLKNSLFEYQKN 79 (562)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHHhh
Confidence 3455566677777777666443
No 50
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=30.47 E-value=1.9e+02 Score=22.32 Aligned_cols=72 Identities=10% Similarity=0.136 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhchHHHHH-HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15556 158 IIRELHDEITKLKAMLTSVKVNSVARQQ-LLSKAQQTQGNQPQMLAALQAKQEQEKVLTEEWAEKWRETQKIL 229 (288)
Q Consensus 158 ~i~~l~~ei~~L~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~e~~~e~~~~~ 229 (288)
....|..+..+|+.+|............ +.............+....+..+..+..|+..+...-...+..+
T Consensus 7 ~~~~lq~~~~ql~~qL~k~~~~r~~Le~~w~~k~E~~k~qV~~L~~~~q~sE~~L~~Lqq~fsq~q~~vq~qL 79 (112)
T 1x79_B 7 QVKKLQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALVLRAQASEILLEELQQGLSQAKRDVQEQM 79 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666777777776655432222111 11112222233445566677777788888777765544444433
No 51
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=30.21 E-value=3.4e+02 Score=25.31 Aligned_cols=20 Identities=25% Similarity=0.413 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHhhhhhc
Q psy15556 160 RELHDEITKLKAMLTSVKVN 179 (288)
Q Consensus 160 ~~l~~ei~~L~~~l~~~~~~ 179 (288)
+.++..|+.|+..|..+...
T Consensus 63 r~~~~rIe~L~~~L~~~s~s 82 (390)
T 1deq_A 63 QDFTSRINKLRDSLFNYQKN 82 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHh
Confidence 45566666666666665443
No 52
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=26.15 E-value=2.2e+02 Score=21.65 Aligned_cols=28 Identities=21% Similarity=0.222 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15556 200 MLAALQAKQEQEKVLTEEWAEKWRETQK 227 (288)
Q Consensus 200 ~~~~l~~~~~~~~~l~~~~~e~~~e~~~ 227 (288)
+...+++.++...++.++..++.++.+.
T Consensus 35 LKD~LEe~eE~~aql~Re~~eK~re~e~ 62 (103)
T 4h22_A 35 LKDMLLELEEQLAESRRQYEEKNKEFER 62 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555555555544433
No 53
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=24.52 E-value=2.4e+02 Score=21.53 Aligned_cols=68 Identities=16% Similarity=0.255 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHhcCCchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15556 156 TRIIRELHDEITKLKAMLTSVKVNSVARQQLLSKAQQTQGNQPQM-LAALQAKQEQEKVLTEEWAEKWRETQKILQEQQ 233 (288)
Q Consensus 156 ~~~i~~l~~ei~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~l~~~~~e~~~e~~~~~~e~~ 233 (288)
..-+++|++|+...+.+|...+.. +.....+.+.+.+++ ...++.. +.....++.|+.+.+.++.+..
T Consensus 34 M~~ieeLQ~Ei~~~E~QL~iArQK------LkdAe~~~E~DPDevNK~tl~~R----~~~Vsalq~KiaeLKrqLAd~v 102 (107)
T 2k48_A 34 MSTLQELQENITAHEQQLVTARQK------LKDAEKAVEVDPDDVNKSTLQNR----RAAVSTLETKLGELKRQLADLV 102 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHhcCCCcHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 455888889988888888654332 222222222222222 1222222 2233455667777777666543
No 54
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=23.85 E-value=2.1e+02 Score=20.74 Aligned_cols=23 Identities=17% Similarity=0.396 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy15556 202 AALQAKQEQEKVLTEEWAEKWRE 224 (288)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~e~~~e 224 (288)
+.+....+++++-...|+++++.
T Consensus 51 ~~L~~en~qLk~E~~~wq~Rl~~ 73 (81)
T 2jee_A 51 EELERENNHLKEQQNGWQERLQA 73 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666666777776643
No 55
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=22.15 E-value=1.3e+02 Score=21.03 Aligned_cols=24 Identities=17% Similarity=0.092 Sum_probs=17.6
Q ss_pred cHHHHHHHHHHHHHHHHHHhhhhh
Q psy15556 155 NTRIIRELHDEITKLKAMLTSVKV 178 (288)
Q Consensus 155 ~~~~i~~l~~ei~~L~~~l~~~~~ 178 (288)
.....++++.|+..|+.++.....
T Consensus 4 ~~~~~~~l~~E~~~lk~E~~stSa 27 (65)
T 3sja_C 4 LSKKYLAKVKERHELKEFNNSISA 27 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred hHHHHHHHHHHHHHHHHHHhccch
Confidence 345677888899999888876543
No 56
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=21.66 E-value=3.1e+02 Score=21.95 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15556 199 QMLAALQAKQEQEKVLTEEWAEKWRETQKILQEQQAL 235 (288)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~e~~~e~~~~~~e~~~l 235 (288)
+-.+++.+.+++..+..++.++..++.+..+...+++
T Consensus 89 eQ~~ri~~Le~E~~~~~~el~~~v~eae~ll~~v~~~ 125 (151)
T 1yke_B 89 EQLRKIDMLQKKLVEVEDEKIEAIKKKEKLLRHVDSL 125 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3356677777777788888888888888877766544
No 57
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=20.69 E-value=3.3e+02 Score=21.79 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q psy15556 199 QMLAALQAKQEQEKVLTEEWAEKWR-ETQKILQEQQ 233 (288)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~e~~~-e~~~~~~e~~ 233 (288)
.....|...++.+....-.|..-|+ |++.+-+|++
T Consensus 65 ~a~~eL~~m~~~i~~ekP~WKKiWE~EL~~VceEQq 100 (141)
T 3okq_A 65 NAQADVLKLQEFIDTEKPHWKKTWEAELDKVCEEQQ 100 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHH
Confidence 3344455555555555555655554 2333444443
No 58
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=20.49 E-value=2.1e+02 Score=20.28 Aligned_cols=18 Identities=22% Similarity=0.220 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy15556 204 LQAKQEQEKVLTEEWAEK 221 (288)
Q Consensus 204 l~~~~~~~~~l~~~~~e~ 221 (288)
+++.++.++++....+++
T Consensus 35 Lr~kd~~I~eLEk~L~ek 52 (72)
T 3nmd_A 35 LRQRDALIDELELELDQK 52 (72)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444433
Done!