BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15557
(207 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3TZM9|ALG11_MOUSE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Mus
musculus GN=Alg11 PE=2 SV=1
Length = 492
Score = 194 bits (492), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 130/185 (70%), Gaps = 7/185 (3%)
Query: 16 LFYSILALILLLIIVLPISVLLFKYYVSKKRKSYNVLKT------VAFFHPYCNAGGGGE 69
LF+ L + +L + L I + + ++++ +K+KS + K VAFFHPYCNAGGGGE
Sbjct: 20 LFFPGLMICGVLCVYLVIGLWVIRWHLQRKKKSVSTSKNGKEQTVVAFFHPYCNAGGGGE 79
Query: 70 RVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPEQAINFVYLYRRKF 129
RVLW A+ AL +KYP+ +YTGD++ S +I+ A +RFNI L + FV+L +R
Sbjct: 80 RVLWCALRALQKKYPEAVYVVYTGDINVSGQQILDGAFRRFNIKLA-HPVQFVFLRKRYL 138
Query: 130 VEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIH 189
VE S YP+FTLLGQS+GS++LG EAL+ PD+YID+MGYAFT PLF Y+GG +V Y+H
Sbjct: 139 VEDSRYPHFTLLGQSLGSILLGWEALMQRVPDVYIDSMGYAFTLPLFKYVGGCRVGSYVH 198
Query: 190 YPTIT 194
YPTI+
Sbjct: 199 YPTIS 203
>sp|Q6P312|ALG11_XENTR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Xenopus tropicalis GN=alg11 PE=2 SV=1
Length = 487
Score = 190 bits (482), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 125/189 (66%), Gaps = 8/189 (4%)
Query: 13 LVFLFYSILALILLLIIVLPISVLLFKYYVSKKRKSYNVL-------KTVAFFHPYCNAG 65
L LF +L + L +VL + + + ++ +K+K + + VAFFHPYCNAG
Sbjct: 14 LTALFIPVLIASIGLCLVLVLLFICTRLWIQRKKKQSVEIGKDGKKKRVVAFFHPYCNAG 73
Query: 66 GGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPEQAINFVYLY 125
GGGERVLW A+ +L ++Y D IYTGD D S +I+ A RFNI L + F++L
Sbjct: 74 GGGERVLWCALRSLQKRYKDAIYVIYTGDKDVSEEQILNGAAARFNIKL-SHPVKFIFLE 132
Query: 126 RRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVA 185
+R VEAS YP FTLLGQS+GS++LG EAL PDIYID+MGYAFT PLF Y+GG +V
Sbjct: 133 KRGLVEASFYPRFTLLGQSLGSVVLGWEALTKCVPDIYIDSMGYAFTLPLFKYVGGCQVG 192
Query: 186 CYIHYPTIT 194
CY+HYPTI+
Sbjct: 193 CYVHYPTIS 201
>sp|Q7ZW24|ALG11_DANRE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Danio rerio GN=alg11 PE=2 SV=2
Length = 500
Score = 189 bits (481), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 127/189 (67%), Gaps = 8/189 (4%)
Query: 13 LVFLFYSILA----LILLLIIVLPISVLLFKYYVSKKRKSYNVLK---TVAFFHPYCNAG 65
L+ L +S++ L LL +L + ++ + ++ KRK+ V VAFFHPYCNAG
Sbjct: 14 LIRLLWSLMLPCFYLSFLLTTILFLFIMGVRSWLQMKRKTRRVQDGRPAVAFFHPYCNAG 73
Query: 66 GGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPEQAINFVYLY 125
GGGERVLW A+ AL +Y D +YTGD + EI+ A +RFNI LP + + FV+L
Sbjct: 74 GGGERVLWCALRALQNRYQDVSFVVYTGDQGVTAEEILDGARRRFNIRLP-RPVKFVFLK 132
Query: 126 RRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVA 185
R VEA LYP+FTLLGQS+GS+ LG EAL F PD+YID+MG+AFT P+F Y+GG +V
Sbjct: 133 HRLLVEAKLYPHFTLLGQSVGSIFLGWEALTEFVPDLYIDSMGFAFTLPVFRYLGGCQVG 192
Query: 186 CYIHYPTIT 194
Y+HYPTI+
Sbjct: 193 SYVHYPTIS 201
>sp|Q2TAA5|ALG11_HUMAN GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Homo sapiens GN=ALG11 PE=1 SV=2
Length = 492
Score = 187 bits (474), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 124/173 (71%), Gaps = 4/173 (2%)
Query: 24 ILLLIIVLPISVLL--FKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQ 81
+ L+I++ I +LL K VS + N + +AFFHPYCNAGGGGERVLW A+ AL +
Sbjct: 33 VCLVIVLWGIRLLLQRKKKLVSTSKNGKNQM-VIAFFHPYCNAGGGGERVLWCALRALQK 91
Query: 82 KYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPEQAINFVYLYRRKFVEASLYPYFTLL 141
KYP+ +YTGDV+ + +I++ A +RFNI L + FV+L +R VE SLYP+FTLL
Sbjct: 92 KYPEAVYVVYTGDVNVNGQQILEGAFRRFNIRLI-HPVQFVFLRKRYLVEDSLYPHFTLL 150
Query: 142 GQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTIT 194
GQS+GS+ LG EAL+ PD+YID+MGYAFT PLF YIGG +V Y+HYPTI+
Sbjct: 151 GQSLGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYIGGCQVGSYVHYPTIS 203
>sp|Q5R7Z6|ALG11_PONAB GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Pongo abelii GN=ALG11 PE=2 SV=2
Length = 492
Score = 186 bits (473), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 124/173 (71%), Gaps = 4/173 (2%)
Query: 24 ILLLIIVLPISVLL--FKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQ 81
+ L+I++ I +LL K VS + N + +AFFHPYCNAGGGGERVLW A+ AL +
Sbjct: 33 VCLVIVLWGIRLLLQRKKKLVSTSKNGKNQM-VIAFFHPYCNAGGGGERVLWCALRALQK 91
Query: 82 KYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPEQAINFVYLYRRKFVEASLYPYFTLL 141
KYP+ +YTGDV+ + +I++ A +RFNI L + FV+L +R VE SLYP+FTLL
Sbjct: 92 KYPEAVYVVYTGDVNVNGQQILEGAFRRFNIRLI-HPVQFVFLRKRYLVEDSLYPHFTLL 150
Query: 142 GQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTIT 194
GQS+GS+ LG EAL+ PD+YID+MGYAFT PLF YIGG +V Y+HYPTI+
Sbjct: 151 GQSLGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYIGGCQVGSYVHYPTIS 203
>sp|Q08B22|ALG11_XENLA GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Xenopus laevis GN=alg11 PE=2 SV=2
Length = 486
Score = 186 bits (473), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 123/187 (65%), Gaps = 6/187 (3%)
Query: 13 LVFLFYSILALILLLIIVLPISVLLFKYYVSKKRK-----SYNVLKTVAFFHPYCNAGGG 67
L LF +L + L ++ + + + +V +K+K K VAFFHPYCNAGGG
Sbjct: 14 LTALFIPVLITSVGLCLIFVLLFICTRLWVQRKKKVEIGKDGKKKKVVAFFHPYCNAGGG 73
Query: 68 GERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPEQAINFVYLYRR 127
GERVLW A+ +L ++Y D IYTGD DAS +I+ A RFNI L + F++L +R
Sbjct: 74 GERVLWCALRSLQKRYKDAIYVIYTGDKDASEEQILNGAAARFNIKL-SHPVRFIFLEKR 132
Query: 128 KFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACY 187
VEAS YP FTLLGQS+GS++LG EAL PDIYID+MGYAFT PLF Y+GG V CY
Sbjct: 133 GLVEASCYPRFTLLGQSLGSVVLGWEALTKCVPDIYIDSMGYAFTLPLFKYLGGCHVGCY 192
Query: 188 IHYPTIT 194
+HYPTI+
Sbjct: 193 VHYPTIS 199
>sp|Q54DM9|ALG11_DICDI GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Dictyostelium discoideum GN=alg11 PE=3 SV=1
Length = 505
Score = 180 bits (457), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 80/141 (56%), Positives = 106/141 (75%), Gaps = 1/141 (0%)
Query: 54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIV 113
++ FFHPYC AGGGGERVLW A+ ++ ++YP + +YTGD + S EI + + F+I
Sbjct: 63 SIGFFHPYCTAGGGGERVLWCAIKSIQEEYPYVRCVVYTGDKE-SDDEIFNKVKKTFDIE 121
Query: 114 LPEQAINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTY 173
L + F+ L +RK+VEAS YP FTL+GQS+GSMILG EAL F P I++D+MGYAFT+
Sbjct: 122 LGRDNLEFIRLKKRKWVEASTYPRFTLIGQSLGSMILGWEALTKFVPTIFLDSMGYAFTF 181
Query: 174 PLFSYIGGSKVACYIHYPTIT 194
P+FS IGGS VACY+HYPTI+
Sbjct: 182 PIFSLIGGSTVACYVHYPTIS 202
>sp|P53993|YMP8_CAEEL Uncharacterized glycosyltransferase B0361.8 OS=Caenorhabditis
elegans GN=B0361.8 PE=3 SV=3
Length = 470
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 117/177 (66%), Gaps = 6/177 (3%)
Query: 18 YSILALILLLIIVLPISVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVL 77
+SI + L+ +++ + ++ F Y +RKS KTVAFFHPYCNAGGGGERVLW A+
Sbjct: 11 HSITTVFYLVPLIIAL-IIPFSLYSGFRRKS----KTVAFFHPYCNAGGGGERVLWAAIR 65
Query: 78 ALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPEQAINFVYLYRRKFVEASLYPY 137
+ +K+PD+K ++Y+GD DA+ +I+ +A QRF I L I F+YL+ R VEA Y +
Sbjct: 66 TMQKKFPDHKYFVYSGDTDATKEQILLKARQRFGIELDPSNIQFIYLHWRTLVEARHYKH 125
Query: 138 FTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTIT 194
T+L Q++ +IL +EA P ++ID+MGY + P F + GSKV Y+HYPTI+
Sbjct: 126 CTMLFQALAGLILALEAWFRMVPAVFIDSMGYPLSLPAFR-LSGSKVVAYVHYPTIS 181
>sp|Q9XEE9|ALG11_ARATH GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Arabidopsis thaliana GN=ALG11 PE=1 SV=2
Length = 463
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 117/184 (63%), Gaps = 11/184 (5%)
Query: 11 MWLVFLFYSILALILLLIIVLPISVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGER 70
M + F+ Y++L +I + + L +SV+ K RK + V FFHPY N GGGGER
Sbjct: 1 MAIYFILYTLLTIIFAVSLSLFLSVI----NARKSRK-----RAVGFFHPYTNDGGGGER 51
Query: 71 VLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPEQAINFVYLYRRKFV 130
VLW AV A+ ++ PD I+TGD D+S + +RA RF + L + ++L +RK++
Sbjct: 52 VLWCAVKAIQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHL-QSPPKVIHLNKRKWI 110
Query: 131 EASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHY 190
E S YP+FT++GQS+GS+ L EAL F P ++DT GYAFTYPL + I G KV CY HY
Sbjct: 111 EESTYPHFTMIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPL-ARIFGCKVVCYTHY 169
Query: 191 PTIT 194
PTI+
Sbjct: 170 PTIS 173
>sp|O74878|ALG11_SCHPO GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=alg11 PE=3 SV=1
Length = 471
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 109/171 (63%), Gaps = 5/171 (2%)
Query: 24 ILLLIIVLPISVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKY 83
I L+ + P+ L+K + + + +TV FFHPYCNAGGGGERVLWTAV ++ ++
Sbjct: 30 IRLIKKIAPVKASLYKQVGVEPK----LARTVGFFHPYCNAGGGGERVLWTAVKSVQTEF 85
Query: 84 PDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPEQAINFVYLYRRKFVEASLYPYFTLLGQ 143
P+ +YTGD + S +EI++R F I L I FVYL R V A+ + FTLLGQ
Sbjct: 86 PNVISVVYTGD-NVSKAEILRRVKNTFEIDLDSSKIVFVYLKLRFLVSATTWHRFTLLGQ 144
Query: 144 SIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTIT 194
S+GSMILG EA+ F PDI+IDTMGYAFT+ + V Y+HYPTI+
Sbjct: 145 SLGSMILGFEAIYRFAPDIFIDTMGYAFTFCVVKSFQNIPVGAYVHYPTIS 195
>sp|Q6FWD1|ALG11_CANGA GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=ALG11 PE=3 SV=1
Length = 505
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 95/139 (68%)
Query: 56 AFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLP 115
FFHPYCNAGGGGE+VLW AV P+ I IYTGDVD+SP EII +RF+ +
Sbjct: 49 GFFHPYCNAGGGGEKVLWKAVQETLLYDPNCSIVIYTGDVDSSPKEIIANVIKRFDYEMD 108
Query: 116 EQAINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPL 175
+ FV+L RK+V+ S + + TL+GQ++GSM+L +EALL F PDI++DTMGY F YP+
Sbjct: 109 FNRVQFVFLKYRKWVDGSTWKHLTLVGQAMGSMLLTIEALLRFVPDIWLDTMGYPFGYPV 168
Query: 176 FSYIGGSKVACYIHYPTIT 194
++ G V Y HYP I+
Sbjct: 169 VRWLAGLPVMTYTHYPVIS 187
>sp|Q8X092|ALG11_NEUCR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=alg-11 PE=3 SV=1
Length = 556
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 93/141 (65%), Gaps = 1/141 (0%)
Query: 55 VAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVL 114
V FFHP+CNAGGGGERVLW A+ A +++P K +YTGD D S I+ R QRFNI L
Sbjct: 102 VGFFHPFCNAGGGGERVLWAAIRATQKRWPKAKCVVYTGDHDVSKEAILSRVEQRFNIHL 161
Query: 115 PEQAINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP 174
+NF+YL R++V AS +PYFTL GQS GS+I+ +A PDI++DTMGYAF
Sbjct: 162 HPPTVNFLYLSTRRWVLASTWPYFTLAGQSFGSLIMAWDAFSLLVPDIFVDTMGYAFALG 221
Query: 175 LFSYI-GGSKVACYIHYPTIT 194
++ A Y+HYPTI+
Sbjct: 222 FSRFLFRDVPTAAYVHYPTIS 242
>sp|Q6CLD6|ALG11_KLULA GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ALG11
PE=3 SV=1
Length = 570
Score = 144 bits (363), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 88/142 (61%)
Query: 53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNI 112
K + FFHPYCNAGGGGE+VLW AV + + IYTGD D + S+I+ +RF
Sbjct: 116 KLLGFFHPYCNAGGGGEKVLWKAVETSLNQDKNNICVIYTGDTDVNGSDILNSVRRRFEY 175
Query: 113 VLPEQAINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFT 172
L I F++L +R+ VE+ +P FTLLGQ+ GS+IL +EAL + PD +IDTMGY F
Sbjct: 176 DLDSDRIVFIFLQKRRLVESKSWPKFTLLGQAYGSIILSIEALTTLAPDYWIDTMGYPFA 235
Query: 173 YPLFSYIGGSKVACYIHYPTIT 194
YP S + Y HYP I+
Sbjct: 236 YPFVSLFARIPIVTYTHYPVIS 257
>sp|Q75B12|ALG11_ASHGO GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=ALG11 PE=3 SV=1
Length = 582
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Query: 46 RKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKR 105
R+S +L FFHP+CNAGGGGE+VLW AV ++ + + +YTGD D + + I+
Sbjct: 122 RRSGRIL--FGFFHPFCNAGGGGEKVLWKAVETTLKQSLNNIVVVYTGDCDTTGARILSN 179
Query: 106 AHQRFNIVLPEQAINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYID 165
RF L + I F++L RK+VE+ +P TLLGQ++GS++L +EA L PD++ D
Sbjct: 180 VEHRFGSQLDSERIVFIFLRHRKWVESRTWPRMTLLGQALGSIVLSIEAALCCPPDVWCD 239
Query: 166 TMGYAFTYPLFSYIGGSKVACYIHYPTIT 194
TMGY F YP S++ + Y HYP ++
Sbjct: 240 TMGYPFGYPFVSWLCRIPIITYTHYPVVS 268
>sp|P53954|ALG11_YEAST GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ALG11 PE=1 SV=1
Length = 548
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 92/149 (61%), Gaps = 5/149 (3%)
Query: 52 LKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDV----DASPSEIIKRAH 107
+K FFHPYCNAGGGGE+VLW AV +K I IY+GD + +P I+
Sbjct: 71 VKVFGFFHPYCNAGGGGEKVLWKAVDITLRKDAKNVIVIYSGDFVNGENVTPENILNNVK 130
Query: 108 QRFNIVLPEQAINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTM 167
+F+ L I F+ L R V++S + +FTL+GQ+IGSMIL E+++ PDI+IDTM
Sbjct: 131 AKFDYDLDSDRIFFISLKLRYLVDSSTWKHFTLIGQAIGSMILAFESIIQCPPDIWIDTM 190
Query: 168 GYAFTYPLFS-YIGGSKVACYIHYPTITK 195
GY F+YP+ + ++ + Y HYP ++K
Sbjct: 191 GYPFSYPIIARFLRRIPIVTYTHYPIMSK 219
>sp|Q6C9T3|ALG11_YARLI GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=ALG11 PE=3 SV=1
Length = 635
Score = 112 bits (280), Expect = 2e-24, Method: Composition-based stats.
Identities = 59/149 (39%), Positives = 85/149 (57%), Gaps = 9/149 (6%)
Query: 56 AFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVD----ASPSEIIKRAHQRFN 111
FFHPY NAGGGGERVLW AV + IY G+ D SPS ++ A F+
Sbjct: 141 GFFHPYANAGGGGERVLWAAVKDTLMYDDNIICAIYCGEQDLPTRTSPSTVLDAAVSNFH 200
Query: 112 IV-LPEQA----INFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDT 166
+ L ++ I F+ + R+ V+ +P FTL+ Q+ GS+ + + + PD+++DT
Sbjct: 201 VTELADKELRKRIVFIGMRGRRLVDPKTWPRFTLMMQAAGSVWMAWHGISTLVPDVFVDT 260
Query: 167 MGYAFTYPLFSYIGGSKVACYIHYPTITK 195
MGY F YPL S++ VA Y+HYP I+K
Sbjct: 261 MGYPFAYPLVSWVTHVPVAAYVHYPVISK 289
>sp|Q6BVB2|ALG11_DEBHA GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=ALG11 PE=3 SV=2
Length = 616
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 86/154 (55%), Gaps = 4/154 (2%)
Query: 44 KKRKSYNVLKTV--AFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSE 101
KKR + + + FFHPY N GGGGERVLW AV A + IYT + ++ P+
Sbjct: 102 KKRDVRDPQRKIIYGFFHPYANNGGGGERVLWQAVQATLATSDRNIVAIYTTNYESDPTS 161
Query: 102 IIKRAHQRFNIV-LPEQAINFVYLYR-RKFVEASLYPYFTLLGQSIGSMILGVEALLSFQ 159
I+ + +F I L E I FVYL + + ++ + FTL+GQ GSM+L EA+
Sbjct: 162 ILDKVEAKFQISRLDEDRIVFVYLRKYARLIDGDYWKRFTLIGQLFGSMVLSWEAMFELS 221
Query: 160 PDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTI 193
PD++IDT+G +Y L S + + Y+HYP I
Sbjct: 222 PDVWIDTIGLPGSYLLVSLVLKIPIMSYVHYPII 255
>sp|Q59S72|ALG11_CANAL GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=ALG11 PE=3 SV=1
Length = 609
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 84/143 (58%), Gaps = 4/143 (2%)
Query: 56 AFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLP 115
FFHPY N GGGGERVLW AV A IYT +++A P +I+ +A+++F I
Sbjct: 112 GFFHPYANNGGGGERVLWQAVKATLLADDKNICVIYTTNIEAQPLDILNKANKKFQIDGL 171
Query: 116 EQAINFVYLYRRKF---VEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFT 172
+ + V++Y RKF ++ + + +FTL+GQ G ++L +EA+ PD++IDTMG +
Sbjct: 172 DHS-RVVFIYLRKFNNLIDGNYWKHFTLIGQLFGGILLSLEAMYELSPDVWIDTMGLPSS 230
Query: 173 YPLFSYIGGSKVACYIHYPTITK 195
Y L S + Y H+P + +
Sbjct: 231 YLLVSLSLKIPILAYTHFPILQE 253
>sp|P34664|YOY6_CAEEL Uncharacterized protein ZK652.6 OS=Caenorhabditis elegans
GN=ZK652.6 PE=4 SV=2
Length = 575
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 41 YVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKI 88
Y + Y+ K V+F PYCN G ER T VL+ H + P Y +
Sbjct: 78 YQGDPTRHYDERKIVSFTCPYCNITGLTERQFGTHVLSQHPEAPGYSV 125
>sp|B3WDY2|MURG_LACCB UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Lactobacillus casei (strain BL23) GN=murG
PE=3 SV=1
Length = 363
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 113 VLPEQAINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFT 172
++P + F L + F + FT + + +GS+ + L FQPDI + T GY
Sbjct: 46 IVPATGLKFATLDLQGFKRSLSLSNFTTVRKFLGSLGEAKKLLQDFQPDIVVGTGGYVSG 105
Query: 173 YPLFSYIGGSKVACYIHYPTI 193
LF+ A +H PT+
Sbjct: 106 AILFA-------ATRLHIPTV 119
>sp|Q039R7|MURG_LACC3 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Lactobacillus casei (strain ATCC 334)
GN=murG PE=3 SV=1
Length = 363
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 113 VLPEQAINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFT 172
++P + F L + F + FT + + +GS+ + L FQPDI + T GY
Sbjct: 46 IVPATGLKFATLDLQGFKRSLSLSNFTTVRKFLGSLGEAKKLLQDFQPDIVVGTGGYVSG 105
Query: 173 YPLFSYIGGSKVACYIHYPTI 193
LF+ A +H PT+
Sbjct: 106 AILFA-------ATRLHIPTV 119
>sp|O43103|SID2_USTMA Ferrichrome siderophore peptide synthetase OS=Ustilago maydis (strain
521 / FGSC 9021) GN=SID2 PE=3 SV=2
Length = 4114
Score = 35.0 bits (79), Expect = 0.38, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Query: 98 SPSEIIKRAHQRFNIVLPEQAINFVYLYRRKFVEASLYPY---FTLLGQS 144
+ S++ KRAHQ N +LP Q ++ L R +++ S P+ F+ LGQS
Sbjct: 2353 ASSDLCKRAHQAVNAILPHQHVSLPQLMR--WLDLSKAPFEALFSYLGQS 2400
>sp|Q8DG51|SYN_THEEB Asparagine--tRNA ligase OS=Thermosynechococcus elongatus (strain
BP-1) GN=asnS PE=3 SV=1
Length = 462
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYK-IYIYTGDVDAS 98
Y + KKR S+ L+T+A P N G RV A+HQ + + ++++T + AS
Sbjct: 105 YPLQKKRHSFEFLRTIAHLRPRTNTLGAVMRVRNACATAIHQFFQERGFLWVHTPIITAS 164
Query: 99 PSE 101
E
Sbjct: 165 DCE 167
>sp|Q9Z972|SYI_CHLPN Isoleucine--tRNA ligase OS=Chlamydia pneumoniae GN=ileS PE=3 SV=1
Length = 1043
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 14/100 (14%)
Query: 111 NIVLPEQAINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYA 170
N++ E+A +F+Y ++ P F +LG+ +GS + V+ LS P+ ID +
Sbjct: 854 NVIFYEEAPSFIY--------TTVKPNFRMLGKKVGSKMKEVQKALSELPNNAIDKLIQE 905
Query: 171 FTYPL------FSYIGGSKVACYIHYPTITKAQSALPRVI 204
T+ L + G V C P SAL VI
Sbjct: 906 ETWVLTIDDREIALDGDDVVICRHTDPGYIARSSALFSVI 945
>sp|Q3A2G6|MURG_PELCD UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Pelobacter carbinolicus (strain DSM 2380
/ Gra Bd 1) GN=murG PE=3 SV=1
Length = 358
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 113 VLPEQAINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFT 172
VLPEQ + R FV L ++ I S+ G+ L FQPD+ + GYA +
Sbjct: 46 VLPEQGWPLELIDIRGFVNQGLLGKLRMIPCLIRSVWQGLCILRKFQPDVVLGVGGYA-S 104
Query: 173 YPLFSYIGGSKVACYIHY-PTITKAQSALP 201
P+ VA + PT+ Q+A P
Sbjct: 105 APML-------VAARLKRIPTVIHEQNAWP 127
>sp|A6LPI6|SYN_CLOB8 Asparagine--tRNA ligase OS=Clostridium beijerinckii (strain ATCC
51743 / NCIMB 8052) GN=asnS PE=3 SV=1
Length = 464
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYT 92
Y + KKR ++ L+T+A P NA RV A A+H+ + D ++YT
Sbjct: 107 YPLQKKRHTFEYLRTIAHLRPRSNAFAATFRVRSVAAYAIHKFFQDQN-FVYT 158
>sp|P43636|ALG2_YEAST Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ALG2 PE=1
SV=2
Length = 503
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDAS 98
+T+AF HP GG ER++ A L L Q+ + + IYT D S
Sbjct: 7 RTIAFIHPDLGI-GGAERLVVDAALGLQQQ--GHSVIIYTSHCDKS 49
>sp|Q5L5W0|KAD_CHLAB Adenylate kinase OS=Chlamydophila abortus (strain S26/3) GN=adk
PE=3 SV=1
Length = 213
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 10/61 (16%)
Query: 56 AFFHPYCNAG---GGGERVLWTAVLALH---QKYPDYKIYIYTGDVDASPSEIIKRAHQR 109
A P C +G G R L A+L Q Y DY++ +D S EII+R H R
Sbjct: 75 ALNQPECQSGCIIDGFPRTLDQAILLNDFFMQSYADYRVI----QLDVSNEEIIRRIHSR 130
Query: 110 F 110
F
Sbjct: 131 F 131
>sp|Q817I8|SYN_BACCR Asparagine--tRNA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=asnS PE=3 SV=1
Length = 463
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYK-IYIYTGDVDAS 98
Y + KKR ++ L+T+A P NA RV A A+HQ + + ++++T + S
Sbjct: 106 YPLQKKRHTFEYLRTIAHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGS 165
Query: 99 PSE 101
+E
Sbjct: 166 DTE 168
>sp|Q0SQ51|SYN_CLOPS Asparagine--tRNA ligase OS=Clostridium perfringens (strain SM101 /
Type A) GN=asnS PE=3 SV=1
Length = 465
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 39 KYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYT 92
Y + KKR ++ L+T+A P NA RV A A+H+ + D + ++YT
Sbjct: 107 DYPLQKKRHTFEYLRTIAHLRPRSNAFSATFRVRSVAAYAIHKFFQD-QGFVYT 159
>sp|P58693|SYN_CLOPE Asparagine--tRNA ligase OS=Clostridium perfringens (strain 13 /
Type A) GN=asnS PE=3 SV=1
Length = 465
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 39 KYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYT 92
Y + KKR ++ L+T+A P NA RV A A+H+ + D + ++YT
Sbjct: 107 DYPLQKKRHTFEYLRTIAHLRPRSNAFSATFRVRSVAAYAIHKFFQD-QGFVYT 159
>sp|Q0TMF3|SYN_CLOP1 Asparagine--tRNA ligase OS=Clostridium perfringens (strain ATCC
13124 / NCTC 8237 / Type A) GN=asnS PE=3 SV=1
Length = 465
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 39 KYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYT 92
Y + KKR ++ L+T+A P NA RV A A+H+ + D + ++YT
Sbjct: 107 DYPLQKKRHTFEYLRTIAHLRPRSNAFSATFRVRSVAAYAIHKFFQD-QGFVYT 159
>sp|Q72ZI3|SYN_BACC1 Asparagine--tRNA ligase OS=Bacillus cereus (strain ATCC 10987)
GN=asnS PE=3 SV=1
Length = 463
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYK-IYIYTGDVDAS 98
Y + KKR ++ L+T+A P NA RV A A+HQ + + ++++T + S
Sbjct: 106 YPLQKKRHTFEYLRTIAHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGS 165
Query: 99 PSE 101
+E
Sbjct: 166 DTE 168
>sp|Q6HCW9|SYN_BACHK Asparagine--tRNA ligase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=asnS PE=3 SV=1
Length = 463
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYK-IYIYTGDVDAS 98
Y + KKR ++ L+T+A P NA RV A A+HQ + + ++++T + S
Sbjct: 106 YPLQKKRHTFEYLRTIAHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGS 165
Query: 99 PSE 101
+E
Sbjct: 166 DTE 168
>sp|Q633N6|SYN_BACCZ Asparagine--tRNA ligase OS=Bacillus cereus (strain ZK / E33L)
GN=asnS PE=3 SV=1
Length = 463
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYK-IYIYTGDVDAS 98
Y + KKR ++ L+T+A P NA RV A A+HQ + + ++++T + S
Sbjct: 106 YPLQKKRHTFEYLRTIAHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGS 165
Query: 99 PSE 101
+E
Sbjct: 166 DTE 168
>sp|Q81L32|SYN_BACAN Asparagine--tRNA ligase OS=Bacillus anthracis GN=asnS PE=3 SV=1
Length = 463
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYK-IYIYTGDVDAS 98
Y + KKR ++ L+T+A P NA RV A A+HQ + + ++++T + S
Sbjct: 106 YPLQKKRHTFEYLRTIAHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGS 165
Query: 99 PSE 101
+E
Sbjct: 166 DTE 168
>sp|A0LL53|SYN_SYNFM Asparagine--tRNA ligase OS=Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB) GN=asnS PE=3 SV=1
Length = 466
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKI-YIYTGDVDAS 98
Y + KKR S+ L+ + P N G RV A+HQ + D YI+T + AS
Sbjct: 110 YPLQKKRHSFEFLRQIGHLRPRTNTIGAVSRVRNRLSYAIHQFFQDRGFYYIHTPIITAS 169
Query: 99 PSE 101
E
Sbjct: 170 DCE 172
>sp|Q03EY2|MURG_PEDPA UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Pediococcus pentosaceus (strain ATCC
25745 / 183-1w) GN=murG PE=3 SV=1
Length = 362
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 22/140 (15%)
Query: 64 AGGGGERVLWTA---VLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPEQAIN 120
+GGG ++ A + + Q PD +I +Y G S+I+ P+ I+
Sbjct: 6 SGGGTGGHIYPALALIKQVKQSEPDSQI-LYVGTSKGLESKIV-----------PDSGID 53
Query: 121 FVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIG 180
F + + F + F +G + S++ + + F+PD+ + T GY +F+
Sbjct: 54 FKTINIQGFKRSLSLENFKTIGLFLSSVVKARKMVKEFKPDVVLGTGGYVSGAVVFA--- 110
Query: 181 GSKVACYIHYPTITKAQSAL 200
A + PT+ Q+++
Sbjct: 111 ----ASMMGVPTVIHEQNSV 126
>sp|P52276|SYN_SYNY3 Asparagine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=asnS PE=3 SV=2
Length = 462
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYK-IYIYTGDVDAS 98
Y + KKR S+ L+T+ P N G RV A+HQ + + ++++T + AS
Sbjct: 106 YPLQKKRHSFEFLRTIGHLRPRTNTIGAVMRVRNACATAIHQFFQERGFLWVHTPIITAS 165
Query: 99 PSE 101
E
Sbjct: 166 DCE 168
>sp|Q2SJV9|SYN_HAHCH Asparagine--tRNA ligase OS=Hahella chejuensis (strain KCTC 2396)
GN=asnS PE=3 SV=1
Length = 465
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQ 81
Y V+KKR ++ L+ VA P NA G RV T A+H
Sbjct: 109 YPVAKKRHTFEFLRGVAHLRPRTNAFGAVTRVRTTLSHAVHH 150
>sp|A6TVS9|SYN_ALKMQ Asparagine--tRNA ligase OS=Alkaliphilus metalliredigens (strain
QYMF) GN=asnS PE=3 SV=1
Length = 463
Score = 31.2 bits (69), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYT 92
Y + KKR ++ L+ +A P NA RV A A+HQ + + K ++YT
Sbjct: 106 YPLQKKRHTFEYLRQIAHLRPRSNAFSAVFRVRSIAAFAIHQFFQE-KGFVYT 157
>sp|Q24MK1|SYN_DESHY Asparagine--tRNA ligase OS=Desulfitobacterium hafniense (strain
Y51) GN=asnS PE=3 SV=1
Length = 463
Score = 30.8 bits (68), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 39 KYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYK-IYIYTGDVDA 97
Y + KKR S+ L+T+A P N RV A+H+ + D +YI+T +
Sbjct: 105 DYPLQKKRHSFEYLRTIAHLRPRTNTFAAVFRVRSLVAYAIHKFFQDKGFVYIHTPIITG 164
Query: 98 SPSE 101
S +E
Sbjct: 165 SDAE 168
>sp|A5G5R2|SYN_GEOUR Asparagine--tRNA ligase OS=Geobacter uraniireducens (strain Rf4)
GN=asnS PE=3 SV=1
Length = 461
Score = 30.8 bits (68), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYK-IYIYTGDVDAS 98
Y + KKR S+ L+T+A P N G RV + A+H+ + + +Y++T + A+
Sbjct: 105 YPLQKKRHSFEYLRTIAHLRPRTNTFGAVFRVRSSLAQAVHRFFAERGFLYVHTPIITAN 164
Query: 99 PSE 101
E
Sbjct: 165 DCE 167
>sp|A1APP8|SYN_PELPD Asparagine--tRNA ligase OS=Pelobacter propionicus (strain DSM 2379)
GN=asnS PE=3 SV=1
Length = 459
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 39 KYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYK-IYIYTGDVDA 97
Y + KKR S+ L+ +A P N G R+ A+H+ + D +Y++T + A
Sbjct: 102 NYPLQKKRHSFEYLREIAHLRPRSNTFGAVFRLRSRLAQAIHRFFGDNNFLYVHTPIITA 161
Query: 98 SPSE 101
S E
Sbjct: 162 SDCE 165
>sp|B2TI01|SYN_CLOBB Asparagine--tRNA ligase OS=Clostridium botulinum (strain Eklund 17B
/ Type B) GN=asnS PE=3 SV=1
Length = 464
Score = 30.4 bits (67), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYT 92
Y + KKR ++ L+++A P NA RV A A+H K+ + ++YT
Sbjct: 107 YPLQKKRHTFEYLRSIAHLRPRSNAFSATFRVRSVAAFAIH-KFFQEQGFVYT 158
>sp|Q6MEC9|SYN_PARUW Asparagine--tRNA ligase OS=Protochlamydia amoebophila (strain
UWE25) GN=asnS PE=3 SV=1
Length = 467
Score = 30.4 bits (67), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYK-IYIYTGDVDAS 98
Y + KKR ++ L+++A P N G RV A HQ + +YI+T + S
Sbjct: 110 YLLQKKRHTFEFLRSIAHLRPRTNTIGAVTRVRNALAFATHQFFQKRGFLYIHTPIITGS 169
Query: 99 PSE 101
E
Sbjct: 170 DCE 172
>sp|B2UXS0|SYN_CLOBA Asparagine--tRNA ligase OS=Clostridium botulinum (strain Alaska E43
/ Type E3) GN=asnS PE=3 SV=1
Length = 464
Score = 30.4 bits (67), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 40 YYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYT 92
Y + KKR ++ L+++A P NA RV A A+H K+ + ++YT
Sbjct: 107 YPLQKKRHTFEYLRSIAHLRPRSNAFSATFRVRSVAAFAIH-KFFQEQGFVYT 158
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.144 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,373,893
Number of Sequences: 539616
Number of extensions: 2990624
Number of successful extensions: 10730
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 10674
Number of HSP's gapped (non-prelim): 63
length of query: 207
length of database: 191,569,459
effective HSP length: 112
effective length of query: 95
effective length of database: 131,132,467
effective search space: 12457584365
effective search space used: 12457584365
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)