BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15562
(318 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q63635|STX6_RAT Syntaxin-6 OS=Rattus norvegicus GN=Stx6 PE=1 SV=1
Length = 255
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 140/266 (52%), Gaps = 51/266 (19%)
Query: 1 EVSKAINKTRSLYKRWLELKEETYASNILRDELEWTTTELRNSLRSIEWDLEDLEDTINI 60
EV KA+N + L++RW EL + A+ R+E++WTT ELRN+LRSIEWDLEDL++TI+I
Sbjct: 13 EVQKAVNTAQGLFQRWTELLQGPSAAT--REEIDWTTNELRNNLRSIEWDLEDLDETISI 70
Query: 61 LYNN---FDFIEHLCMKDTMNYSREKDRGGDHMSSKPLLSDDFHSPSPVKISAPFGSSRQ 117
+ N F+ + + I F +S +
Sbjct: 71 VEANPRKFNL----------------------------------DATELSIRKAFITSTR 96
Query: 118 TKYSKLNNQMDSPNRSWLSNSINQQSAMFDQQDSQLDMLSETIGTLTVQVRRQTKYSKLN 177
+ +QM + + L+ N+Q+ + D D +T +Y +L+
Sbjct: 97 QIVRDMKDQMSASSVQALAERKNRQALLGDSSSQNWD------AGVT------DRYGRLD 144
Query: 178 NQMDSPNRSWVSNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEM 237
++ N ++ QQ + +QQD QL+++S +IG LK +S+ IG EL+EQA+MLD+
Sbjct: 145 RELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDF 204
Query: 238 GNEMECTESKLDATMKKVAKVLHISN 263
+E+E T+S+LD MKK+AKV H+++
Sbjct: 205 SHELESTQSRLDNVMKKLAKVSHMTS 230
>sp|Q5R6Q2|STX6_PONAB Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1
Length = 255
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 136/273 (49%), Gaps = 65/273 (23%)
Query: 1 EVSKAINKTRSLYKRWLELKEETYASNILRDELEWTTTELRNSLRSIEWDLEDLEDTINI 60
EV KA+N + L++RW EL ++ S R+E++WTT ELRN+LRSIEWDLEDL++TI+I
Sbjct: 13 EVQKAVNTAQGLFQRWTELLQD--PSTATREEIDWTTNELRNNLRSIEWDLEDLDETISI 70
Query: 61 LYN-----NFDFIEHLCMKDTMNYSREKDRG-GDHMSSKPL--LSDDFHSPSPVKISAPF 112
+ N D E K + +R+ R D MS+ + L++ + + + S
Sbjct: 71 VEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNRQALLGDSGSQ 130
Query: 113 GSSRQT--KYSKLNNQMDSPNRSWLSNSINQQSAMFDQQDSQLDMLSETIGTLTVQVRRQ 170
S T KY +L+ ++ N ++ QQ + +QQD QL+++S +IG L
Sbjct: 131 NWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVL------- 183
Query: 171 TKYSKLNNQMDSPNRSWVSNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQ 230
K +S+ IG EL+EQ
Sbjct: 184 ----------------------------------------------KNMSQRIGGELEEQ 197
Query: 231 ALMLDEMGNEMECTESKLDATMKKVAKVLHISN 263
A+ML++ +E+E T+S+LD MKK+AKV H+++
Sbjct: 198 AVMLEDFSHELESTQSRLDNVMKKLAKVSHMTS 230
>sp|O43752|STX6_HUMAN Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1
Length = 255
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 136/273 (49%), Gaps = 65/273 (23%)
Query: 1 EVSKAINKTRSLYKRWLELKEETYASNILRDELEWTTTELRNSLRSIEWDLEDLEDTINI 60
EV KA+N + L++RW EL ++ S R+E++WTT ELRN+LRSIEWDLEDL++TI+I
Sbjct: 13 EVQKAVNTAQGLFQRWTELLQD--PSTATREEIDWTTNELRNNLRSIEWDLEDLDETISI 70
Query: 61 LYN-----NFDFIEHLCMKDTMNYSREKDRG-GDHMSSKPL--LSDDFHSPSPVKISAPF 112
+ N D E K + +R+ R D MS+ + L++ + + + S
Sbjct: 71 VEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNRQALLGDSGSQ 130
Query: 113 GSSRQT--KYSKLNNQMDSPNRSWLSNSINQQSAMFDQQDSQLDMLSETIGTLTVQVRRQ 170
S T KY +L+ ++ N ++ QQ + +QQD QL+++S +IG L
Sbjct: 131 NWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVL------- 183
Query: 171 TKYSKLNNQMDSPNRSWVSNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQ 230
K +S+ IG EL+EQ
Sbjct: 184 ----------------------------------------------KNMSQRIGGELEEQ 197
Query: 231 ALMLDEMGNEMECTESKLDATMKKVAKVLHISN 263
A+ML++ +E+E T+S+LD MKK+AKV H+++
Sbjct: 198 AVMLEDFSHELESTQSRLDNVMKKLAKVSHMTS 230
>sp|Q9JKK1|STX6_MOUSE Syntaxin-6 OS=Mus musculus GN=Stx6 PE=1 SV=1
Length = 255
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 137/273 (50%), Gaps = 65/273 (23%)
Query: 1 EVSKAINKTRSLYKRWLELKEETYASNILRDELEWTTTELRNSLRSIEWDLEDLEDTINI 60
EV KA+N + L++RW EL + A+ R+E++WTT ELRN+LRSIEWDLEDL++TI+I
Sbjct: 13 EVQKAVNTAQGLFQRWTELLQGPSAAT--REEIDWTTNELRNNLRSIEWDLEDLDETISI 70
Query: 61 LYN-----NFDFIEHLCMKDTMNYSREKDRG-GDHMSSKPL--LSDDFHSPSPVKISA-- 110
+ N D E K + +R+ R D MS+ + L++ + + + S+
Sbjct: 71 VEANPRKFNLDATELSIRKAFITSTRQIVRDMKDQMSASSVQALAERKNRQALLGDSSSQ 130
Query: 111 PFGSSRQTKYSKLNNQMDSPNRSWLSNSINQQSAMFDQQDSQLDMLSETIGTLTVQVRRQ 170
+ + +Y +L+ ++ N ++ QQ + +QQD QL+++S +IG L
Sbjct: 131 SWNAGVADRYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVL------- 183
Query: 171 TKYSKLNNQMDSPNRSWVSNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQ 230
K +S+ IG EL+EQ
Sbjct: 184 ----------------------------------------------KNMSQRIGGELEEQ 197
Query: 231 ALMLDEMGNEMECTESKLDATMKKVAKVLHISN 263
A+MLD+ +E+E T+S+LD MKK+AKV H+++
Sbjct: 198 AVMLDDFSHELESTQSRLDNVMKKLAKVSHMTS 230
>sp|O60499|STX10_HUMAN Syntaxin-10 OS=Homo sapiens GN=STX10 PE=1 SV=1
Length = 249
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 127/271 (46%), Gaps = 67/271 (24%)
Query: 1 EVSKAINKTRSLYKRWLELKEETYASNILRDELEWTTTELRNSLRSIEWDLEDLEDTINI 60
EV KA+N R LY+RW EL +E+ A + R+EL+WTT ELRN LRSIEWDLEDLE+TI I
Sbjct: 13 EVQKAVNTARGLYQRWCELLQESAA--VGREELDWTTNELRNGLRSIEWDLEDLEETIGI 70
Query: 61 LYNN--------FDFIEHLCMKDTMNYSREKDRGGDHMSSKPLLSDDFHSPSPVKISAPF 112
+ N D E + M + ++ + DHM S ++ F + +I A
Sbjct: 71 VEANPGKFKLPAGDLQERKVFVERMREAVQEMK--DHMVSPTAVA--FLERNNREILAGK 126
Query: 113 GSSRQTKYSKLNNQMDSPNRSWLSNSINQQSAMFDQQDSQLDMLSETIGTLTVQVRRQTK 172
+++++ L+ S ++ Q + D+QD QL+M+S +I L
Sbjct: 127 PAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVL--------- 177
Query: 173 YSKLNNQMDSPNRSWVSNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQAL 232
K +S +G ELDEQ +
Sbjct: 178 --------------------------------------------KHMSGRVGEELDEQGI 193
Query: 233 MLDEMGNEMECTESKLDATMKKVAKVLHISN 263
MLD EM+ T+S++D ++K+AKV H+++
Sbjct: 194 MLDAFAQEMDHTQSRMDGVLRKLAKVSHMTS 224
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 37/121 (30%)
Query: 180 MDSPNRSWVSNSINQQSA----MFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLD 235
+D+ S S I +Q A + D+QD QL+M+S +I LK +S +G ELDEQ
Sbjct: 137 LDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQ----- 191
Query: 236 EMGNEMECTESKLDATMKKVAKVLHISNGEMLDEMGNEMECTESKLDATMKKVAKVLHIS 295
G MLD EM+ T+S++D ++K+AKV H++
Sbjct: 192 ----------------------------GIMLDAFAQEMDHTQSRMDGVLRKLAKVSHMT 223
Query: 296 N 296
+
Sbjct: 224 S 224
>sp|Q5ZL19|STX6_CHICK Syntaxin-6 OS=Gallus gallus GN=STX6 PE=2 SV=1
Length = 254
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 138/272 (50%), Gaps = 64/272 (23%)
Query: 1 EVSKAINKTRSLYKRWLELKEETYASNILRDELEWTTTELRNSLRSIEWDLEDLEDTINI 60
EV KA+N + L++RW EL ++ + R+E++WTT ELRN+LRSIEWDLEDL++TI+I
Sbjct: 13 EVQKAVNTAQGLFQRWTELLQDPSIAT--REEIDWTTNELRNNLRSIEWDLEDLDETISI 70
Query: 61 LYN-----NFDFIEHLCMKDTMNYSREKDRG-GDHMSSKPL--LSDDFHSPSPV-KISAP 111
+ N D E K + +R+ R D MS+ + L++ + + + + S+
Sbjct: 71 VEANPRKFNLDATELGIRKSFITSTRQVVREMKDQMSNSSMQALAERKNRQALLGESSSQ 130
Query: 112 FGSSRQTKYSKLNNQMDSPNRSWLSNSINQQSAMFDQQDSQLDMLSETIGTLTVQVRRQT 171
SS KYS+L+ ++ N ++ QQ + +QQD QL+++S +IG L
Sbjct: 131 SWSSGPDKYSRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVL-------- 182
Query: 172 KYSKLNNQMDSPNRSWVSNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQA 231
K +S+ IG EL+EQA
Sbjct: 183 ---------------------------------------------KNMSQRIGGELEEQA 197
Query: 232 LMLDEMGNEMECTESKLDATMKKVAKVLHISN 263
+MLD+ +E++ T S+LD MKK+AKV H+++
Sbjct: 198 VMLDDFSHELDSTHSRLDNVMKKLAKVSHMTS 229
>sp|P83528|STX5_CAEEL Putative syntaxin C15C7.1 OS=Caenorhabditis elegans GN=C15C7.1 PE=3
SV=1
Length = 122
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 63/96 (65%), Gaps = 6/96 (6%)
Query: 172 KYSKLNNQM----DSPNRSWVSNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSEL 227
+YSKLN + D P S + + +Q + +QD +L+++ ++ TL+ +S IG EL
Sbjct: 5 RYSKLNEEEISLEDMP--SSANQILTRQEQIIQEQDDELELVGNSVRTLRGMSSMIGDEL 62
Query: 228 DEQALMLDEMGNEMECTESKLDATMKKVAKVLHISN 263
D+Q+ MLD++G EME +E++LD MKK+AK+ H+ +
Sbjct: 63 DQQSTMLDDLGQEMEYSETRLDTAMKKMAKLTHLED 98
>sp|Q946Y7|SYP61_ARATH Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1
Length = 245
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 186 SWVSNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTE 245
+V + ++Q + QQD +LD LS+++ + V I EL Q ++DE+ EM+ T+
Sbjct: 143 GFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTEMDSTK 202
Query: 246 SKLDATMKKVAKVLHISN--GEML 267
++L+ KKV V+ + G+M+
Sbjct: 203 NRLEFVQKKVGMVMKKAGAKGQMM 226
>sp|Q9Z2Q7|STX8_RAT Syntaxin-8 OS=Rattus norvegicus GN=Stx8 PE=1 SV=1
Length = 236
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 203 DSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKVAKV 258
D+ LD LS I K + + IG+ELDEQ ++D++ N +E T+ KL ++V V
Sbjct: 152 DAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRTEARRVTLV 207
>sp|O88983|STX8_MOUSE Syntaxin-8 OS=Mus musculus GN=Stx8 PE=1 SV=1
Length = 236
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 203 DSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKVAKV 258
D+ LD LS I K + + IG+ELDEQ ++D++ N +E T+ KL ++V V
Sbjct: 152 DAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRTEARRVTLV 207
>sp|Q9HGN3|TLG1_SCHPO t-SNARE affecting a late Golgi compartment protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tlg1 PE=3 SV=1
Length = 225
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 203 DSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKV 255
D LD + +TIG ++ + +G EL +QA +LD + N +E T SKL MK++
Sbjct: 140 DVMLDGVYDTIGNIRGQAALMGEELGQQADLLDTLDNSIETTNSKLRRGMKRL 192
>sp|Q3T075|STX8_BOVIN Syntaxin-8 OS=Bos taurus GN=STX8 PE=2 SV=1
Length = 236
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 203 DSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKV 255
D+ LD LS I K + + IG+ELDEQ ++D++ N +E T+ KL ++V
Sbjct: 152 DAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRTETRRV 204
>sp|Q9UNK0|STX8_HUMAN Syntaxin-8 OS=Homo sapiens GN=STX8 PE=1 SV=2
Length = 236
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 203 DSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKVAKV 258
D+ LD LS I K + + IG+ELDEQ ++D++ N +E T+ KL ++V V
Sbjct: 152 DAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNETRRVNMV 207
>sp|Q03322|TLG1_YEAST T-SNARE affecting a late Golgi compartment protein 1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TLG1 PE=1 SV=1
Length = 224
Score = 38.1 bits (87), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 164 TVQVRRQTKYSKLNNQMDSPNRSWVSNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNI 223
T+ + + S LN M N +SN +Q M +QD LD + +T+ L ++ +
Sbjct: 102 TIPLEETVENSTLNTSMAENNDGGMSNPFQEQ--MLREQDVHLDGIHKTMQNLHIQAQTM 159
Query: 224 GSELDEQALMLDEMGNEMECTESKL 248
G EL+ Q +LD M M+ +KL
Sbjct: 160 GDELENQGQLLDNMDEGMDGVVNKL 184
>sp|Q9LMG8|SNP30_ARATH Putative SNAP25 homologous protein SNAP30 OS=Arabidopsis thaliana
GN=SNAP30 PE=3 SV=1
Length = 263
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 38/59 (64%)
Query: 201 QQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKVAKVL 259
+QD L LS+ +G LK+++ ++GSE+D+Q LD +G++++ S++ ++ +L
Sbjct: 203 KQDDGLSDLSDILGDLKSMAVDMGSEIDKQNKALDHLGDDVDELNSRVQGANQRARHLL 261
>sp|Q94KK6|SYP72_ARATH Syntaxin-72 OS=Arabidopsis thaliana GN=SYP72 PE=2 SV=1
Length = 267
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%)
Query: 201 QQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKVAKVL 259
+QD LD++SE + LK ++R++ ELD+Q +++EM +++ S L T ++ K L
Sbjct: 178 KQDEGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQL 236
>sp|Q9M2J9|BET11_ARATH Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1
Length = 122
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 186 SWVSNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTE 245
S S+ IN+ + + L+ L + + LK +S +I E+D MLD MGN+M+ +
Sbjct: 27 SSYSHEINEH-----ENERALEGLQDRVILLKRLSGDINEEVDTHNRMLDRMGNDMDSSR 81
Query: 246 SKLDATMKKVAKVL 259
L TM + V
Sbjct: 82 GFLSGTMDRFKTVF 95
>sp|A4J181|LEU1_DESRM 2-isopropylmalate synthase OS=Desulfotomaculum reducens (strain
MI-1) GN=leuA PE=3 SV=1
Length = 505
Score = 35.4 bits (80), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 11/67 (16%)
Query: 255 VAKVLHISNG-----------EMLDEMGNEMECTESKLDATMKKVAKVLHISNVFCSYEM 303
V K LHIS G +M DE+ E C + +DA K V K+ IS +Y +
Sbjct: 391 VLKYLHISTGTAVVPTATLGLQMGDELKEEAACGDGPVDAIYKTVDKITGISCTLVNYAI 450
Query: 304 NLFCSSE 310
N +
Sbjct: 451 NAITGGK 457
>sp|Q94KK5|SYP73_ARATH Syntaxin-73 OS=Arabidopsis thaliana GN=SYP73 PE=2 SV=1
Length = 263
Score = 35.0 bits (79), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 38/63 (60%)
Query: 189 SNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKL 248
S+ Q+ M + ++LD ++E + TLK ++++I ELD Q ++DE+ +++ + L
Sbjct: 162 SDQFKQEYEMKRIKQARLDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDL 221
Query: 249 DAT 251
+T
Sbjct: 222 KST 224
>sp|Q0II86|SNP29_BOVIN Synaptosomal-associated protein 29 OS=Bos taurus GN=SNAP29 PE=2
SV=1
Length = 258
Score = 35.0 bits (79), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 203 DSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKV 255
DS LD LS +G LK ++ I +E+DEQ +LD + ++++ + + +T +KV
Sbjct: 203 DSNLDELSVGLGRLKDIALGIQTEIDEQDDILDRLTSKVDKLDVSITSTERKV 255
>sp|P14708|INVO_PONPY Involucrin OS=Pongo pygmaeus GN=IVL PE=2 SV=1
Length = 835
Score = 35.0 bits (79), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 146 FDQQDSQLDMLSETIGTLTV--QVRRQTKY-SKLNNQMDSPNRSWVS-NSINQQSAM--- 198
+QQ+ QL++ E +G L Q Q K+ + Q++ P + + QQ
Sbjct: 476 LEQQEGQLEVPEEQVGQLKYLEQQEGQLKHLDQQEGQLELPEQQEGQLKHLEQQEGQLKH 535
Query: 199 FDQQDSQLDMLSETIGTLKTVSRNIGS--ELDEQALMLDEMGNEMECTESKLDATMKKVA 256
+ Q+ QL++ E +G LK + + G LD+Q L ++ E +L+ ++V
Sbjct: 536 LEHQEGQLEVPEEQVGQLKYLEQQEGQLKHLDQQEGQL----KHLDQQEKQLELPEQQVG 591
Query: 257 KVLHISNGE 265
++ H+ E
Sbjct: 592 QLKHLEQQE 600
>sp|O74509|VAM7_SCHPO Vacuolar morphogenesis protein 7 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC594.06c PE=3 SV=1
Length = 341
Score = 35.0 bits (79), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 193 NQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATM 252
N Q+ + QD Q + L I K +S+ I E+ EQ MLDE+ NE + KL T
Sbjct: 275 NMQNQTMEDQDMQAESLLPIIQRQKELSKMINQEVVEQNSMLDELSNEAYANQKKLHRTR 334
Query: 253 KKVAKV 258
+ K+
Sbjct: 335 AGLRKL 340
>sp|B2SGW7|RNH2_FRATM Ribonuclease HII OS=Francisella tularensis subsp. mediasiatica
(strain FSC147) GN=rnhB PE=3 SV=1
Length = 187
Score = 34.7 bits (78), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 127 MDSPNRSWLSNSINQQSAMFDQQDSQLDMLSETIGTLTVQVRRQTKYSKLNNQMDSPNRS 186
+D R LS + + DQ D +D L+++ LT + +RQ+ Y Q+ + ++
Sbjct: 6 IDEAGRGPLSGPVVAAGVILDQ-DKIIDGLADS-KKLT-EKKRQSLYQ----QIITHAKA 58
Query: 187 WVSNSINQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTES 246
+ IN Q Q +L++L T+ + V+ N+ + D+ +++D GN++ +
Sbjct: 59 YTIVEINPQ------QIDELNILQATLKAMHQVANNLERQFDK--VLVD--GNKLPNWDY 108
Query: 247 KLDATMKKVAKVLHISNGEMLDEMGNEMECTE 278
+A +K +K++ IS +L ++ + C E
Sbjct: 109 NSEAIVKGDSKIIEISAASILAKVHRDNICLE 140
>sp|Q6BPK1|MED14_DEBHA Mediator of RNA polymerase II transcription subunit 14
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=RGR1 PE=3 SV=2
Length = 1123
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 76/161 (47%), Gaps = 16/161 (9%)
Query: 135 LSNSINQQSAMFDQQDSQLDMLSETIGTLTVQVRRQTKYSKLNNQMDSPNRSWVSNSINQ 194
L+NS + +F + + L+ET L + + + Y ++N+ ++ N+ +++S +
Sbjct: 808 LNNSTQMKLKLFGNLRNIPNTLAETFNQLNLHISKSQNYFEINDIVNLSNK--INDSSIK 865
Query: 195 QSAMFDQQDSQLDMLSETIGTLKTVSRN----IGSELDEQALMLDEMGNEMECTESKLDA 250
++ + D +L++L+E I L + +N + S +D + +DE N + ++D
Sbjct: 866 ETRLLDSILLKLNVLNELIKVLYQLDQNNIEIVNSSIDSIQIKIDEESNNLTIKLPEMDE 925
Query: 251 TMKKVAKVLHISNGEMLDEMGNEMECTESKLDATMKKVAKV 291
++ SN E NEM+ S L+ + +KV
Sbjct: 926 KFSLLS-----SNTE-----SNEMKLIISYLNKYLSMTSKV 956
>sp|Q9SA23|SYP51_ARATH Syntaxin-51 OS=Arabidopsis thaliana GN=SYP51 PE=1 SV=1
Length = 232
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 192 INQQSAMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDAT 251
+ Q + +QD L+ L T+ + K ++ + ELD Q ++D++ ++ T+S+L
Sbjct: 132 VGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRL--- 188
Query: 252 MKKVAKVLHISNGEM 266
++V K L + N M
Sbjct: 189 -RRVQKSLAVMNKNM 202
>sp|Q9SF29|SYP71_ARATH Syntaxin-71 OS=Arabidopsis thaliana GN=SYP71 PE=1 SV=1
Length = 266
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 201 QQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDAT 251
+Q+ LDM+SE + LK ++ ++ ELD Q ++DE+ +++ S L T
Sbjct: 177 KQEQGLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNT 227
>sp|Q9Z2P6|SNP29_RAT Synaptosomal-associated protein 29 OS=Rattus norvegicus GN=Snap29
PE=1 SV=1
Length = 257
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 203 DSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKVAKV 258
DS LD LS +G LK ++ + +E++EQ +LD + +++ + + +T KKV ++
Sbjct: 202 DSNLDELSVGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTEKKVRQL 257
>sp|Q9ERB0|SNP29_MOUSE Synaptosomal-associated protein 29 OS=Mus musculus GN=Snap29 PE=1
SV=1
Length = 260
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 203 DSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKVAKV 258
DS LD LS +G LK ++ + +E++EQ +LD + +++ + + +T KKV ++
Sbjct: 205 DSNLDELSVGLGHLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTEKKVRQL 260
>sp|Q94KK7|SYP52_ARATH Syntaxin-52 OS=Arabidopsis thaliana GN=SYP52 PE=1 SV=1
Length = 233
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Query: 181 DSPNRSWVSNSINQQSAMFD-----QQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLD 235
D+ NR VS NQ +F +QD L+ L ET+ + K ++ + EL Q ++D
Sbjct: 119 DAINR--VSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLID 176
Query: 236 EMGNEMECTESKLDATMKKVAKVLHISNGEM 266
++ +++ T+S+L ++V K L + N M
Sbjct: 177 DLDYDVDITDSRL----RRVQKSLALMNKSM 203
>sp|P0C064|GRSB_BREBE Gramicidin S synthase 2 OS=Brevibacillus brevis GN=grsB PE=1 SV=2
Length = 4450
Score = 32.7 bits (73), Expect = 3.6, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 168 RRQTKYSKLNNQMDSPNRSWVSNSINQQSAMFDQQDSQLDMLSETIGTLKT----VSRNI 223
R + Y +LN + + R + S + D LDM+ +G LK V +I
Sbjct: 2565 REKLSYQELNAKANQLARVLRQKGVQPNSMVGIMVDRSLDMIVGMLGVLKAGGAYVPIDI 2624
Query: 224 GSELDEQALMLDEMGNEMECTESKLDATMKKVAKVLHISNGEMLDEMGNEME 275
+ + M+++ G + T+ KL + +L++ E L E + +E
Sbjct: 2625 DYPQERISYMMEDSGAALLLTQQKLTQQIAFSGDILYLDQEEWLHEEASNLE 2676
>sp|P0C063|GRSB_ANEMI Gramicidin S synthase 2 OS=Aneurinibacillus migulanus GN=grsB PE=3
SV=2
Length = 4451
Score = 32.7 bits (73), Expect = 3.7, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 168 RRQTKYSKLNNQMDSPNRSWVSNSINQQSAMFDQQDSQLDMLSETIGTLKT----VSRNI 223
R + Y +LN + + R + S + D LDM+ +G LK V +I
Sbjct: 2565 REKLSYQELNAKANQLARVLRQKGVQPNSMVGIMVDRSLDMIVGMLGVLKAGGAYVPIDI 2624
Query: 224 GSELDEQALMLDEMGNEMECTESKLDATMKKVAKVLHISNGEMLDEMGNEME 275
+ + M+++ G + T+ KL + +L++ E L E + +E
Sbjct: 2625 DYPQERISYMMEDSGAALLLTQQKLTQQIAFSGDILYLDQEEWLHEEASNLE 2676
>sp|P83351|SNA29_CAEEL Soluable nsf attachment protein 29 OS=Caenorhabditis elegans
GN=snap-29 PE=3 SV=1
Length = 277
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 197 AMFDQQDSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKVA 256
AM +Q D LDM+S + L+ + ++G E+D Q MLD + + E + + K++
Sbjct: 180 AMDNQIDENLDMMSANLRNLQRLGADLGKEVDSQNEMLDRIQYKAERNDGIVRDQDKQMQ 239
Query: 257 KVL 259
K+L
Sbjct: 240 KIL 242
>sp|P79135|MX1_BOVIN Interferon-induced GTP-binding protein Mx1 OS=Bos taurus GN=MX1
PE=2 SV=4
Length = 648
Score = 32.0 bits (71), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/153 (16%), Positives = 63/153 (41%), Gaps = 6/153 (3%)
Query: 154 DMLSETIGTLTVQVRRQTKYSKLNNQMDSPNRSWVSNSINQQSAMFDQQDSQLDMLSETI 213
D + + + L +++ K Q D +R + ++ ++ F+ D+L E
Sbjct: 247 DKVVDVVRNLVFHLKKGYMIVKCRGQQDIKHRMSLDKALQRERIFFEDHAHFRDLLEEGK 306
Query: 214 GTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKVAKVLHISNGEMLDEMGNE 273
T+ ++ + SEL + + + E+++ T +++ + L ++ +E +
Sbjct: 307 ATIPCLAERLTSEL------IMHICKTLPLLENQIKETHQRITEELQKYGKDIPEEESEK 360
Query: 274 MECTESKLDATMKKVAKVLHISNVFCSYEMNLF 306
M C K+D K++ + Y+ LF
Sbjct: 361 MFCLIEKIDTFNKEIISTIEGEEFVEQYDSRLF 393
>sp|Q5R5K4|SNP29_PONAB Synaptosomal-associated protein 29 OS=Pongo abelii GN=SNAP29 PE=2
SV=1
Length = 258
Score = 32.0 bits (71), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 203 DSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKV 255
DS LD LS +G LK ++ + +E++EQ +LD + +++ + + +T +KV
Sbjct: 203 DSNLDELSVGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKV 255
>sp|O95721|SNP29_HUMAN Synaptosomal-associated protein 29 OS=Homo sapiens GN=SNAP29 PE=1
SV=1
Length = 258
Score = 31.6 bits (70), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 203 DSQLDMLSETIGTLKTVSRNIGSELDEQALMLDEMGNEMECTESKLDATMKKV 255
DS LD LS +G LK ++ + +E++EQ +LD + +++ + + +T +KV
Sbjct: 203 DSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKV 255
>sp|Q54W52|WDR12_DICDI Ribosome biogenesis protein WDR12 homolog OS=Dictyostelium
discoideum GN=wdr12 PE=2 SV=1
Length = 463
Score = 31.2 bits (69), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 135 LSNSINQQSAMFDQQDSQLDMLSETIGTLTVQ-------VRRQTKYSKLNNQMDSPNRSW 187
L+N+ N ++A DQQ + ++E++ ++TV V T++ L+ MDS R W
Sbjct: 256 LANNTNNETAAVDQQSEIIHNITESLASVTVPNSQGVTVVNWTTQFQMLSGSMDSKIRLW 315
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,590,395
Number of Sequences: 539616
Number of extensions: 4090407
Number of successful extensions: 12054
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 191
Number of HSP's that attempted gapping in prelim test: 11796
Number of HSP's gapped (non-prelim): 421
length of query: 318
length of database: 191,569,459
effective HSP length: 117
effective length of query: 201
effective length of database: 128,434,387
effective search space: 25815311787
effective search space used: 25815311787
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)