BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15563
(614 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24524|SING_DROME Protein singed OS=Drosophila melanogaster GN=sn PE=3 SV=1
Length = 512
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/315 (64%), Positives = 242/315 (76%), Gaps = 24/315 (7%)
Query: 236 MNGTNGHHENGNGELNGVGFSSKGVWTIGLINAQFKYLTAETFGFKINANGASLKKKQVW 295
MNG + NG++ KG WTIGLIN Q KY+TAETFGFK+NANGASLKKKQ+W
Sbjct: 1 MNGQGCELGHSNGDIISQN-QQKGWWTIGLINGQHKYMTAETFGFKLNANGASLKKKQLW 59
Query: 296 ILEPANGGDTLSVYLRSHLGKYLAVDSFGNVTCEADEKEPGSLFQIHVSDEG--KWAFKN 353
LEP+N G+++ +YLRSHL KYL+VD FGNV CE+DE++ GS FQI +S++G +WA KN
Sbjct: 60 TLEPSNTGESI-IYLRSHLNKYLSVDQFGNVLCESDERDAGSRFQISISEDGSGRWALKN 118
Query: 354 KTRGYFLGASSDKLICTAKIPANPEYWLAHLAARPQVNLRSVGRKRFAHLSENLDEIHVD 413
++RGYFLG + DKL+CTAK P E+W HLAARPQVNLRS+GRKRFAHLSE+ DEIHVD
Sbjct: 119 ESRGYFLGGTPDKLVCTAKTPGASEFWTVHLAARPQVNLRSIGRKRFAHLSESQDEIHVD 178
Query: 414 ANIPWGEDTLFTLEFRAEDSGKYAVHTCNNKYLSREGKLVDTCNANCLFSLEYHAGEFCF 473
ANIPWGEDTLFTLEFRAE+ G+YA+HTCNNKYL+ GKL CN +CLFS EYH
Sbjct: 179 ANIPWGEDTLFTLEFRAEEGGRYALHTCNNKYLNANGKLQVVCNEDCLFSAEYHG----- 233
Query: 474 LYLFIWLRPIRSPATGQIALRDNSGAYLSPIGSKAILKTRSNTVTKDELFTLEDSLPQAS 533
G +ALRD G YLSPIGSKA+LK+RS++VT+DELF+LEDSLPQAS
Sbjct: 234 ---------------GHLALRDRQGQYLSPIGSKAVLKSRSSSVTRDELFSLEDSLPQAS 278
Query: 534 FIAALNSKYVSVKQG 548
FIA LN +YVSVKQG
Sbjct: 279 FIAGLNLRYVSVKQG 293
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/376 (35%), Positives = 192/376 (51%), Gaps = 66/376 (17%)
Query: 4 MNGTNGHHENGNGELNGVGFSSKGVWTIGLINAQFKYLTAETFGFKINANGASLKKKQFK 63
MNG + NG++ KG WTIGLIN Q KY+TA
Sbjct: 1 MNGQGCELGHSNGDIISQN-QQKGWWTIGLINGQHKYMTA-------------------- 39
Query: 64 YLTAETFGFKINANGASLKKKQDGVWILEPANGGDTLSVYLRSHLGKYLAVDSFGNVTCE 123
ETFGFK+NANGASLKKKQ +W LEP+N G+++ +YLRSHL KYL+VD FGNV CE
Sbjct: 40 ----ETFGFKLNANGASLKKKQ--LWTLEPSNTGESI-IYLRSHLNKYLSVDQFGNVLCE 92
Query: 124 ADEKEPGSLFQIHVSDEG--KWAFKNKTRGYFLGASSDKLICTAKIPANPEYWLAHLAAR 181
+DE++ GS FQI +S++G +WA KN++RGYFLG + DKL+CTAK P E+W HLAAR
Sbjct: 93 SDERDAGSRFQISISEDGSGRWALKNESRGYFLGGTPDKLVCTAKTPGASEFWTVHLAAR 152
Query: 182 PQ--LRSCGSPPCASIGLPSSRGLPCRYISSSPSTKAVHKPPPLLKRSVFPLIMNIMNG- 238
PQ LRS G A ++S S V P + ++F L G
Sbjct: 153 PQVNLRSIGRKRFA-------------HLSESQDEIHVDANIPWGEDTLFTLEFRAEEGG 199
Query: 239 ------TNGHHENGNGELNGVG-----FSSK-GVWTIGLINAQFKYLTAETFGFKINANG 286
N + N NG+L V FS++ + L + Q +YL+ + +
Sbjct: 200 RYALHTCNNKYLNANGKLQVVCNEDCLFSAEYHGGHLALRDRQGQYLSPIGSKAVLKSRS 259
Query: 287 ASLKKKQVWILEPANGGDTL--SVYLRSHLGKYLAVDSFGNVTCEADEKEPGSLFQIHVS 344
+S+ + +++ LE D+L + ++ +Y++V +VT DE FQ+
Sbjct: 260 SSVTRDELFSLE-----DSLPQASFIAGLNLRYVSVKQGVDVTANQDEVGENETFQLEYD 314
Query: 345 -DEGKWAFKNKTRGYF 359
+WA + Y+
Sbjct: 315 WSAHRWALRTTQDRYW 330
>sp|Q16658|FSCN1_HUMAN Fascin OS=Homo sapiens GN=FSCN1 PE=1 SV=3
Length = 493
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 168/289 (58%), Gaps = 27/289 (9%)
Query: 263 IGLINAQFKYLTAETFGFKINANGASLKKKQVWILE-PANGGDTLSVYLRSHLGKYLAVD 321
GLIN KYLTAE FGFK+NA+ +SLKKKQ+W LE P + + +V LRSHLG+YLA D
Sbjct: 14 FGLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAAD 73
Query: 322 SFGNVTCEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWL 381
GNVTCE + P F I D+G+W+ +++ + G + D+L C A+ + E W
Sbjct: 74 KDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTEDRLSCFAQTVSPAEKWS 133
Query: 382 AHLAARPQVNLRSVGRKRFAHLSEN-LDEIHVDANIPWGEDTLFTLEFRAEDSGKYAVHT 440
H+A PQVN+ SV RKR+AHLS DEI VD ++PWG D+L TL F+ + +Y+V T
Sbjct: 134 VHIAMHPQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLAFQDQ---RYSVQT 190
Query: 441 CNNKYLSREGKLVDTCNANCLFSLEYHAGEFCFLYLFIWLRPIRSPATGQIALRDNSGAY 500
++++L +G+LV ++LE+ +G++A RD G Y
Sbjct: 191 ADHRFLRHDGRLVARPEPATGYTLEFR--------------------SGKVAFRDCEGRY 230
Query: 501 LSPIGSKAILKT-RSNTVTKDELFTLEDSLPQASFIAALNSKYVSVKQG 548
L+P G LK ++ V KDELF LE S Q AA N + VS +QG
Sbjct: 231 LAPSGPSGTLKAGKATKVGKDELFALEQSCAQVVLQAA-NERNVSTRQG 278
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 63 KYLTAETFGFKINANGASLKKKQDGVWILE-PANGGDTLSVYLRSHLGKYLAVDSFGNVT 121
KYLTAE FGFK+NA+ +SLKKKQ +W LE P + + +V LRSHLG+YLA D GNVT
Sbjct: 22 KYLTAEAFGFKVNASASSLKKKQ--IWTLEQPPDEAGSAAVCLRSHLGRYLAADKDGNVT 79
Query: 122 CEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWLAHLAAR 181
CE + P F I D+G+W+ +++ + G + D+L C A+ + E W H+A
Sbjct: 80 CEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTEDRLSCFAQTVSPAEKWSVHIAMH 139
Query: 182 PQL 184
PQ+
Sbjct: 140 PQV 142
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 546 KQGQIALRDNSGAYLSPIGSKAILKT-RSNTVTKDELFTLEDSLPQASFIAALNSKYVSV 604
+ G++A RD G YL+P G LK ++ V KDELF LE S Q AA N + VS
Sbjct: 217 RSGKVAFRDCEGRYLAPSGPSGTLKAGKATKVGKDELFALEQSCAQVVLQAA-NERNVST 275
Query: 605 KQ 606
+Q
Sbjct: 276 RQ 277
>sp|O18728|FSCN2_BOVIN Fascin-2 OS=Bos taurus GN=FSCN2 PE=2 SV=1
Length = 492
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 164/287 (57%), Gaps = 25/287 (8%)
Query: 263 IGLINAQFKYLTAETFGFKINANGASLKKKQVWILEPANGGDTLSVYLRSHLGKYLAVDS 322
GL+N +YLTAE+FGFK+NA+ SLK+KQ+W+LEP G T ++ SHLG+YL+ +
Sbjct: 14 FGLVNDTDRYLTAESFGFKVNASAPSLKRKQMWVLEPDPGEGTAVLFRSSHLGRYLSAEE 73
Query: 323 FGNVTCEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWLA 382
G V CEA+ F + +G+W +++ G F G + D+L C A E W
Sbjct: 74 DGRVACEAERPGRDCRFLVLPQPDGRWVLQSEPHGRFFGGTEDQLSCFATAITPAELWTV 133
Query: 383 HLAARPQVNLRSVGRKRFAHLSENLDEIHVDANIPWGEDTLFTLEFRAEDSGKYAVHTCN 442
HLA PQ +L SV R+R+AHL DEI D+N PWG D L TL F+ + +Y + +C+
Sbjct: 134 HLAIHPQAHLLSVSRRRYAHLCPQEDEIAADSNTPWGVDALVTLIFQ---NRQYCLKSCD 190
Query: 443 NKYLSREGKLVDTCNANCLFSLEYHAGEFCFLYLFIWLRPIRSPATGQIALRDNSGAYLS 502
++YL +G+LV A ++LE+ A G++A +D G YL+
Sbjct: 191 SRYLRSDGRLVWEPEARARYTLEFKA--------------------GKLAFKDCDGHYLA 230
Query: 503 PIGSKAILKTRSNTVT-KDELFTLEDSLPQASFIAALNSKYVSVKQG 548
P+G L+ NT KDELF LE+S PQ +AA N +YVSV+QG
Sbjct: 231 PVGPAGTLRAGRNTRPGKDELFDLEESHPQVVLVAA-NHRYVSVRQG 276
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 71/121 (58%), Gaps = 2/121 (1%)
Query: 63 KYLTAETFGFKINANGASLKKKQDGVWILEPANGGDTLSVYLRSHLGKYLAVDSFGNVTC 122
+YLTAE+FGFK+NA+ SLK+KQ +W+LEP G T ++ SHLG+YL+ + G V C
Sbjct: 22 RYLTAESFGFKVNASAPSLKRKQ--MWVLEPDPGEGTAVLFRSSHLGRYLSAEEDGRVAC 79
Query: 123 EADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWLAHLAARP 182
EA+ F + +G+W +++ G F G + D+L C A E W HLA P
Sbjct: 80 EAERPGRDCRFLVLPQPDGRWVLQSEPHGRFFGGTEDQLSCFATAITPAELWTVHLAIHP 139
Query: 183 Q 183
Q
Sbjct: 140 Q 140
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 543 VSVKQGQIALRDNSGAYLSPIGSKAILKTRSNTVT-KDELFTLEDSLPQASFIAALNSKY 601
+ K G++A +D G YL+P+G L+ NT KDELF LE+S PQ +AA N +Y
Sbjct: 212 LEFKAGKLAFKDCDGHYLAPVGPAGTLRAGRNTRPGKDELFDLEESHPQVVLVAA-NHRY 270
Query: 602 VSVKQ 606
VSV+Q
Sbjct: 271 VSVRQ 275
>sp|O14926|FSCN2_HUMAN Fascin-2 OS=Homo sapiens GN=FSCN2 PE=1 SV=1
Length = 492
Score = 215 bits (547), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 161/287 (56%), Gaps = 25/287 (8%)
Query: 263 IGLINAQFKYLTAETFGFKINANGASLKKKQVWILEPANGGDTLSVYLRSHLGKYLAVDS 322
GL+N +YLTAE+FGFK+NA+ SLK+KQ W+LEP G T + SHLG+YL+ +
Sbjct: 14 FGLVNDTDRYLTAESFGFKVNASAPSLKRKQTWVLEPDPGQGTAVLLRSSHLGRYLSAEE 73
Query: 323 FGNVTCEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWLA 382
G V CEA++ F + +G+W +++ G F G + D+L C A + E W
Sbjct: 74 DGRVACEAEQPGRDCRFLVLPQPDGRWVLRSEPHGRFFGGTEDQLSCFATAVSPAELWTV 133
Query: 383 HLAARPQVNLRSVGRKRFAHLSENLDEIHVDANIPWGEDTLFTLEFRAEDSGKYAVHTCN 442
HLA PQ +L SV R+R+ HL DE+ D + PWG D L TL FR S +Y + +C+
Sbjct: 134 HLAIHPQAHLLSVSRRRYVHLCPREDEMAADGDKPWGVDALLTLIFR---SRRYCLKSCD 190
Query: 443 NKYLSREGKLVDTCNANCLFSLEYHAGEFCFLYLFIWLRPIRSPATGQIALRDNSGAYLS 502
++YL +G+LV ++LE+ A G++A +D G YL+
Sbjct: 191 SRYLRSDGRLVWEPEPRACYTLEFKA--------------------GKLAFKDCDGHYLA 230
Query: 503 PIGSKAILKTRSNTVT-KDELFTLEDSLPQASFIAALNSKYVSVKQG 548
P+G LK NT KDELF LE+S PQ +AA N +YVSV+QG
Sbjct: 231 PVGPAGTLKAGRNTRPGKDELFDLEESHPQVVLVAA-NHRYVSVRQG 276
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 71/121 (58%), Gaps = 2/121 (1%)
Query: 63 KYLTAETFGFKINANGASLKKKQDGVWILEPANGGDTLSVYLRSHLGKYLAVDSFGNVTC 122
+YLTAE+FGFK+NA+ SLK+KQ W+LEP G T + SHLG+YL+ + G V C
Sbjct: 22 RYLTAESFGFKVNASAPSLKRKQ--TWVLEPDPGQGTAVLLRSSHLGRYLSAEEDGRVAC 79
Query: 123 EADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWLAHLAARP 182
EA++ F + +G+W +++ G F G + D+L C A + E W HLA P
Sbjct: 80 EAEQPGRDCRFLVLPQPDGRWVLRSEPHGRFFGGTEDQLSCFATAVSPAELWTVHLAIHP 139
Query: 183 Q 183
Q
Sbjct: 140 Q 140
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 543 VSVKQGQIALRDNSGAYLSPIGSKAILKTRSNTVT-KDELFTLEDSLPQASFIAALNSKY 601
+ K G++A +D G YL+P+G LK NT KDELF LE+S PQ +AA N +Y
Sbjct: 212 LEFKAGKLAFKDCDGHYLAPVGPAGTLKAGRNTRPGKDELFDLEESHPQVVLVAA-NHRY 270
Query: 602 VSVKQ 606
VSV+Q
Sbjct: 271 VSVRQ 275
>sp|Q32M02|FSCN2_MOUSE Fascin-2 OS=Mus musculus GN=Fscn2 PE=2 SV=1
Length = 492
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 164/287 (57%), Gaps = 25/287 (8%)
Query: 263 IGLINAQFKYLTAETFGFKINANGASLKKKQVWILEPANGGDTLSVYLRSHLGKYLAVDS 322
GL+N +YLTAE+FGFK+NA+ ASLK+KQ+W+LEP G T ++ SHLG+YL+ +
Sbjct: 14 FGLVNDADRYLTAESFGFKVNASAASLKRKQIWVLEPDPGQGTAVLFRSSHLGRYLSAEE 73
Query: 323 FGNVTCEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWLA 382
G V CE D+ F + +G+W +++ G F G D+L C A + E W
Sbjct: 74 DGRVACEMDQPGRDCRFLVLPQPDGRWVLQSEPHGRFFGGIEDRLSCFATAISPAELWTV 133
Query: 383 HLAARPQVNLRSVGRKRFAHLSENLDEIHVDANIPWGEDTLFTLEFRAEDSGKYAVHTCN 442
HLA PQ +L SV R+R+ HL DE+ D ++PWG D L TL F+ S +Y + + +
Sbjct: 134 HLAIHPQAHLLSVSRRRYVHLCLQEDEMAADGDMPWGVDALVTLIFQ---SRRYCLKSYD 190
Query: 443 NKYLSREGKLVDTCNANCLFSLEYHAGEFCFLYLFIWLRPIRSPATGQIALRDNSGAYLS 502
++YL +G+LV A+ ++LE+ A G++A +D G YL+
Sbjct: 191 SRYLRSDGRLVWEPEAHACYTLEFKA--------------------GKLAFKDCDGRYLA 230
Query: 503 PIGSKAILKTRSNTV-TKDELFTLEDSLPQASFIAALNSKYVSVKQG 548
P+G LK NT +KDELF LE S PQ +AA N +Y+SV+QG
Sbjct: 231 PVGPAGTLKAGRNTRPSKDELFDLEQSHPQVVLVAA-NRRYISVRQG 276
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
Query: 63 KYLTAETFGFKINANGASLKKKQDGVWILEPANGGDTLSVYLRSHLGKYLAVDSFGNVTC 122
+YLTAE+FGFK+NA+ ASLK+KQ +W+LEP G T ++ SHLG+YL+ + G V C
Sbjct: 22 RYLTAESFGFKVNASAASLKRKQ--IWVLEPDPGQGTAVLFRSSHLGRYLSAEEDGRVAC 79
Query: 123 EADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWLAHLAARP 182
E D+ F + +G+W +++ G F G D+L C A + E W HLA P
Sbjct: 80 EMDQPGRDCRFLVLPQPDGRWVLQSEPHGRFFGGIEDRLSCFATAISPAELWTVHLAIHP 139
Query: 183 Q 183
Q
Sbjct: 140 Q 140
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 543 VSVKQGQIALRDNSGAYLSPIGSKAILKTRSNTV-TKDELFTLEDSLPQASFIAALNSKY 601
+ K G++A +D G YL+P+G LK NT +KDELF LE S PQ +AA N +Y
Sbjct: 212 LEFKAGKLAFKDCDGRYLAPVGPAGTLKAGRNTRPSKDELFDLEQSHPQVVLVAA-NRRY 270
Query: 602 VSVKQ 606
+SV+Q
Sbjct: 271 ISVRQ 275
>sp|Q61553|FSCN1_MOUSE Fascin OS=Mus musculus GN=Fscn1 PE=1 SV=4
Length = 493
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 168/289 (58%), Gaps = 27/289 (9%)
Query: 263 IGLINAQFKYLTAETFGFKINANGASLKKKQVWILE-PANGGDTLSVYLRSHLGKYLAVD 321
GLI+ KYLTAE FGFK+NA+ +SLKKKQ+W LE P + + +V LRSHLG+YLA D
Sbjct: 14 FGLISCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAAD 73
Query: 322 SFGNVTCEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWL 381
GNVTCE + + F + D+G+W+ +++ + G + D+L C A+ + E W
Sbjct: 74 KDGNVTCEREVPDGDCRFLVVAHDDGRWSLQSEAHRRYFGGTEDRLSCFAQSVSPAEKWS 133
Query: 382 AHLAARPQVNLRSVGRKRFAHLSEN-LDEIHVDANIPWGEDTLFTLEFRAEDSGKYAVHT 440
H+A PQVN+ SV RKR+AHLS DEI VD ++PWG D+L TL F+ + +Y+V T
Sbjct: 134 VHIAMHPQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLAFQDQ---RYSVQT 190
Query: 441 CNNKYLSREGKLVDTCNANCLFSLEYHAGEFCFLYLFIWLRPIRSPATGQIALRDNSGAY 500
++++L +G+LV F+LE+ +G++A RD G Y
Sbjct: 191 SDHRFLRHDGRLVARPEPATGFTLEFR--------------------SGKVAFRDCEGRY 230
Query: 501 LSPIGSKAILKT-RSNTVTKDELFTLEDSLPQASFIAALNSKYVSVKQG 548
L+P G LK ++ V KDELF LE S Q AA N + VS +QG
Sbjct: 231 LAPSGPSGTLKAGKATKVGKDELFALEQSCAQVVLQAA-NERNVSTRQG 278
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 63 KYLTAETFGFKINANGASLKKKQDGVWILE-PANGGDTLSVYLRSHLGKYLAVDSFGNVT 121
KYLTAE FGFK+NA+ +SLKKKQ +W LE P + + +V LRSHLG+YLA D GNVT
Sbjct: 22 KYLTAEAFGFKVNASASSLKKKQ--IWTLEQPPDEAGSAAVCLRSHLGRYLAADKDGNVT 79
Query: 122 CEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWLAHLAAR 181
CE + + F + D+G+W+ +++ + G + D+L C A+ + E W H+A
Sbjct: 80 CEREVPDGDCRFLVVAHDDGRWSLQSEAHRRYFGGTEDRLSCFAQSVSPAEKWSVHIAMH 139
Query: 182 PQL 184
PQ+
Sbjct: 140 PQV 142
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 543 VSVKQGQIALRDNSGAYLSPIGSKAILKT-RSNTVTKDELFTLEDSLPQASFIAALNSKY 601
+ + G++A RD G YL+P G LK ++ V KDELF LE S Q AA N +
Sbjct: 214 LEFRSGKVAFRDCEGRYLAPSGPSGTLKAGKATKVGKDELFALEQSCAQVVLQAA-NERN 272
Query: 602 VSVKQ 606
VS +Q
Sbjct: 273 VSTRQ 277
>sp|P85845|FSCN1_RAT Fascin OS=Rattus norvegicus GN=Fscn1 PE=1 SV=2
Length = 493
Score = 212 bits (539), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 167/289 (57%), Gaps = 27/289 (9%)
Query: 263 IGLINAQFKYLTAETFGFKINANGASLKKKQVWILE-PANGGDTLSVYLRSHLGKYLAVD 321
GLI+ KYLTAE FGFK+NA+ +SLKKKQ+W LE P + + +V LRSHLG YLA D
Sbjct: 14 FGLISCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGPYLAAD 73
Query: 322 SFGNVTCEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWL 381
GNVTCE + + F + D+G+W+ +++ + G + D+L C A+ + E W
Sbjct: 74 KDGNVTCEREVPDGDCRFLVVAHDDGRWSLQSEAHRRYFGGTEDRLSCFAQSVSPAEKWS 133
Query: 382 AHLAARPQVNLRSVGRKRFAHLSEN-LDEIHVDANIPWGEDTLFTLEFRAEDSGKYAVHT 440
H+A PQVN+ SV RKR+AHLS DEI VD ++PWG D+L TL F+ + +Y+V T
Sbjct: 134 VHIAMHPQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLAFQDQ---RYSVQT 190
Query: 441 CNNKYLSREGKLVDTCNANCLFSLEYHAGEFCFLYLFIWLRPIRSPATGQIALRDNSGAY 500
++++L +G+LV F+LE+ +G++A RD G Y
Sbjct: 191 SDHRFLRHDGRLVARPEPATGFTLEFR--------------------SGKVAFRDCEGRY 230
Query: 501 LSPIGSKAILKT-RSNTVTKDELFTLEDSLPQASFIAALNSKYVSVKQG 548
L+P G LK ++ V KDELF LE S Q AA N + VS +QG
Sbjct: 231 LAPSGPSGTLKAGKATKVGKDELFALEQSCAQVVLQAA-NERNVSTRQG 278
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 63 KYLTAETFGFKINANGASLKKKQDGVWILE-PANGGDTLSVYLRSHLGKYLAVDSFGNVT 121
KYLTAE FGFK+NA+ +SLKKKQ +W LE P + + +V LRSHLG YLA D GNVT
Sbjct: 22 KYLTAEAFGFKVNASASSLKKKQ--IWTLEQPPDEAGSAAVCLRSHLGPYLAADKDGNVT 79
Query: 122 CEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWLAHLAAR 181
CE + + F + D+G+W+ +++ + G + D+L C A+ + E W H+A
Sbjct: 80 CEREVPDGDCRFLVVAHDDGRWSLQSEAHRRYFGGTEDRLSCFAQSVSPAEKWSVHIAMH 139
Query: 182 PQL 184
PQ+
Sbjct: 140 PQV 142
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 543 VSVKQGQIALRDNSGAYLSPIGSKAILKT-RSNTVTKDELFTLEDSLPQASFIAALNSKY 601
+ + G++A RD G YL+P G LK ++ V KDELF LE S Q AA N +
Sbjct: 214 LEFRSGKVAFRDCEGRYLAPSGPSGTLKAGKATKVGKDELFALEQSCAQVVLQAA-NERN 272
Query: 602 VSVKQ 606
VS +Q
Sbjct: 273 VSTRQ 277
>sp|Q91837|FASC_XENLA Fascin OS=Xenopus laevis GN=fscn PE=2 SV=1
Length = 483
Score = 195 bits (495), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 158/282 (56%), Gaps = 25/282 (8%)
Query: 257 SKGVWTIGLINAQFKYLTAETFGFKINANGASLKKKQVWILEPANGGDTLSVYLRSHLGK 316
S G +GL+N KYLTAE FGFKINA+ +SLKKKQVW LEPA G DT +V LRSHLG+
Sbjct: 2 SSGPLQLGLVNCNNKYLTAEAFGFKINASASSLKKKQVWSLEPA-GDDTSAVLLRSHLGR 60
Query: 317 YLAVDSFGNVTCEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPAN 376
+L+ D G V+ E+D P F + +G+WA +++ G + G S D++ C + +
Sbjct: 61 FLSADKDGKVSGESDTAGPECRFLVSAQGDGRWALQSELFGRYFGGSEDRISCFSPSVSP 120
Query: 377 PEYWLAHLAARPQVNLRSVGRKRFAHLSENLDEIHVDANIPWGEDTLFTLEFRAEDSGKY 436
E W HLA PQ L SV RKR+ LS + DE+ V+ ++PWG D+L TL F+ +Y
Sbjct: 121 AEKWGVHLAMHPQFTLYSVTRKRYRRLSASGDELSVERDVPWGVDSLITLLFQEN---RY 177
Query: 437 AVHTCNNKYLSREGKLVDTCNANCLFSLEYHAGEFCFLYLFIWLRPIRSPATGQIALRDN 496
++ T +++ L+ +G L + + ++L+ A G++A R +
Sbjct: 178 SIQTPDHRLLASDGSLREKPGPDTAYTLDISA--------------------GKVAFRGS 217
Query: 497 SGAYLSPIGSKAILKTRSNT-VTKDELFTLEDSLPQASFIAA 537
G YL+ G LK+ N+ +DELF LE S PQ A
Sbjct: 218 DGRYLTSSGPSGTLKSGKNSKAGRDELFVLERSCPQVVLTAG 259
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
Query: 63 KYLTAETFGFKINANGASLKKKQDGVWILEPANGGDTLSVYLRSHLGKYLAVDSFGNVTC 122
KYLTAE FGFKINA+ +SLKKKQ VW LEPA G DT +V LRSHLG++L+ D G V+
Sbjct: 16 KYLTAEAFGFKINASASSLKKKQ--VWSLEPA-GDDTSAVLLRSHLGRFLSADKDGKVSG 72
Query: 123 EADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWLAHLAARP 182
E+D P F + +G+WA +++ G + G S D++ C + + E W HLA P
Sbjct: 73 ESDTAGPECRFLVSAQGDGRWALQSELFGRYFGGSEDRISCFSPSVSPAEKWGVHLAMHP 132
Query: 183 QL 184
Q
Sbjct: 133 QF 134
Score = 33.1 bits (74), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Query: 98 DTLSVYLRSHLGKYLAVDSFGNVTCEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGAS 157
DT R+H GKY + S G + A F+I D + K Y
Sbjct: 292 DTKMCAFRTHTGKYWTLSSNGGIQASASTLNSSCYFEIDWCDR-RITLKGVNGKYVTAKK 350
Query: 158 SDKLICTAKIPANPEYWLAHLAARP 182
+ +L + P E +L L RP
Sbjct: 351 NGQLSASVDTPGETELFLMKLINRP 375
>sp|Q05634|FASC_STRPU Fascin OS=Strongylocentrotus purpuratus PE=1 SV=3
Length = 496
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 160/295 (54%), Gaps = 32/295 (10%)
Query: 261 WTIGLINAQFKYLTAETFGFKINANGASLKKKQVWILEPANGGDTLSVYLRSHLGKYLAV 320
+ GL+N+ +YLTAE FG K+NA+GA+LK +QVWILE T+S YL++ G +L+
Sbjct: 8 YKFGLVNSAGRYLTAEKFGGKVNASGATLKARQVWILEQEESS-TIS-YLKAPSGNFLSA 65
Query: 321 DSFGNVTCEADEK--EPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPE 378
D GNV C +++ + + F+I + +GKWA KN + +L + ++LIC+ +NP
Sbjct: 66 DKNGNVYCSVEDRTEDADTGFEIELQPDGKWALKNVSHQRYLACNGEELICSESSTSNPS 125
Query: 379 Y-WLAHLAARPQVNLRSVGRKRFAHL---SENLDEIHVDANIPWGEDTLFTLEFRAEDSG 434
W LA PQV +++V +R+AHL E D + VD +PWG D+ TL + + G
Sbjct: 126 ANWTVQLAIHPQVCMKNVQHQRYAHLKTSEEGEDSVVVDELVPWGADSTLTLVYLGK--G 183
Query: 435 KYAVHTCNNKYLSREGKLVDTCNANCLFSLEYHAGEFCFLYLFIWLRPIRSPATGQIALR 494
KY + N K++ +G+L T N F+L + +G + LR
Sbjct: 184 KYGLEAFNGKFVQTDGQLAGTANEQTQFTLIF--------------------TSGHLVLR 223
Query: 495 DNSGAYLSPIGSKAILKTRSNTVTKDELFTLEDSLPQASFIAALNSKYVSVKQGQ 549
DN+G +L +LK+ +TK F LEDS PQ +F KY S+KQG+
Sbjct: 224 DNNGRHLGVDSGTRVLKSSKPGLTKANYFILEDSCPQGAF--EFGGKYASLKQGE 276
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 31/159 (19%)
Query: 29 WTIGLINAQFKYLTAETFGFKINANGASLKKKQFKYLTAETFGFKINANGASLKKKQDGV 88
+ GL+N+ +YLTAE FG K+NA+GA+LK +Q V
Sbjct: 8 YKFGLVNSAGRYLTAEKFGGKVNASGATLKARQ--------------------------V 41
Query: 89 WILEPANGGDTLSVYLRSHLGKYLAVDSFGNVTCEADEK--EPGSLFQIHVSDEGKWAFK 146
WILE T+S YL++ G +L+ D GNV C +++ + + F+I + +GKWA K
Sbjct: 42 WILEQEESS-TIS-YLKAPSGNFLSADKNGNVYCSVEDRTEDADTGFEIELQPDGKWALK 99
Query: 147 NKTRGYFLGASSDKLICTAKIPANPEY-WLAHLAARPQL 184
N + +L + ++LIC+ +NP W LA PQ+
Sbjct: 100 NVSHQRYLACNGEELICSESSTSNPSANWTVQLAIHPQV 138
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 548 GQIALRDNSGAYLSPIGSKAILKTRSNTVTKDELFTLEDSLPQASFIAALNSKYVSVKQA 607
G + LRDN+G +L +LK+ +TK F LEDS PQ +F KY S+KQ
Sbjct: 218 GHLVLRDNNGRHLGVDSGTRVLKSSKPGLTKANYFILEDSCPQGAF--EFGGKYASLKQG 275
Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 36/192 (18%)
Query: 399 RFAHLSENLD---EIHVDANIPWGEDT-LFTLEFRAEDSGKYAVHTCNNKYLSREGKLVD 454
++A L + D ++ VD +I EDT F LEF D KYA+ C+ K SR+ K
Sbjct: 268 KYASLKQGEDVSFKLLVDEDI---EDTETFQLEFVETD--KYAIRVCDPKKNSRDAKFWK 322
Query: 455 TCNA------------NCLFSLEYHAGEFCFLYLFIWLRPIRSPATGQIALRDNSGAYL- 501
T A +C FS+EY+ + +R+P +++RDN +L
Sbjct: 323 TVAAGIQANGNSKDQTDCQFSVEYNGNDM----------HVRAPGGKYVSVRDNGHLFLQ 372
Query: 502 -SPIGSKAILKTRSNTVTKDE---LFTLEDSLPQASFIAALNSKYVSVKQGQIALRDNSG 557
SP L R V K + E A + + V+ K+G ++D+ G
Sbjct: 373 DSPKDFIFRLLNRPKLVLKCPHGFVGMKEGKAEVACNRSNFDVFTVTYKEGGYTIQDSCG 432
Query: 558 AYLSPIGSKAIL 569
Y S S I+
Sbjct: 433 KYWSCDDSSRIV 444
>sp|Q9QXW4|FSCN3_MOUSE Fascin-3 OS=Mus musculus GN=Fscn3 PE=2 SV=2
Length = 498
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 121/284 (42%), Gaps = 24/284 (8%)
Query: 263 IGLINAQFKYLTAETFGFKINANGASLKKKQVWILEPANGGDTLSVY-LRSHLGKYLAVD 321
+GLI+ YLT E + + A+ SL ++Q W L +N ++ +V L+S G YL +
Sbjct: 18 VGLISWAGTYLTFEAYKSSVTASAKSLGRRQTWELLVSNEHESQAVIRLKSLQGLYLLCE 77
Query: 322 SFGNVTCEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWL 381
+ G V F + GKW + G +L + + + C +++ + W
Sbjct: 78 ADGTVCYGRPRTSHHGCFLLRFHRNGKWTLQCIISGRYLESDGEDVFCNSRVLSAYHMWT 137
Query: 382 AHLAARPQVNLRSVGRKRFAHLSENLDEIHVDANIPWGEDTLFTLEFRAEDSGKYAVHTC 441
A V L S +A + I VDA IP E+ F L F+ G Y + T
Sbjct: 138 PRPALHVHVILYSPIYHSYARADHTVGRIWVDAAIPCLEECGFLLHFQ---DGCYHLETS 194
Query: 442 NNKYLSREGKLVDTCNANCLFSLEYHAGEFCFLYLFIWLRPIRSPATGQIALRDNSGAYL 501
+ +LSR +LV ++ F ++ +RP G +AL D G L
Sbjct: 195 THHFLSRVDRLVPQRSSQTAFHMQ--------------VRP-----RGLVALCDGEGGTL 235
Query: 502 SPIGSKAILKTRSNTVTKDELFTLEDSLPQASFIAALNSKYVSV 545
P GS +L S + +E F L+ P + + + +++SV
Sbjct: 236 YPQGSHLLLGMGSAPMKGEEWFVLQH-FPTWVSLKSKSRRFLSV 278
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 149/403 (36%), Gaps = 64/403 (15%)
Query: 64 YLTAETFGFKINANGASLKKKQDGVWILEPANGGDTLSVY-LRSHLGKYLAVDSFGNVTC 122
YLT E + + A+ SL ++Q W L +N ++ +V L+S G YL ++ G V
Sbjct: 27 YLTFEAYKSSVTASAKSLGRRQ--TWELLVSNEHESQAVIRLKSLQGLYLLCEADGTVCY 84
Query: 123 EADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYW-------- 174
F + GKW + G +L + + + C +++ + W
Sbjct: 85 GRPRTSHHGCFLLRFHRNGKWTLQCIISGRYLESDGEDVFCNSRVLSAYHMWTPRPALHV 144
Query: 175 -------LAHLAAR--------------PQLRSCG-----SPPCASIGLPSSRGLPC--R 206
+ H AR P L CG C + + L R
Sbjct: 145 HVILYSPIYHSYARADHTVGRIWVDAAIPCLEECGFLLHFQDGCYHLETSTHHFLSRVDR 204
Query: 207 YISSSPSTKAVHKPPPLLKRSVFPL-IMNIMNGTNGH-HENGNGELNGVG---------F 255
+ S A H V P ++ + +G G + G+ L G+G F
Sbjct: 205 LVPQRSSQTAFHM-------QVRPRGLVALCDGEGGTLYPQGSHLLLGMGSAPMKGEEWF 257
Query: 256 SSKGVWTIGLINAQFKYLTAETFGFKINANGASLKKKQVWILEPANGGDTLSVYLRSHLG 315
+ T + ++ + + + ++ A L + ++ E + TL LRS G
Sbjct: 258 VLQHFPTWVSLKSKSRRFLSVIYDAEVCAASERLTQMSLFQYECDSETPTLQ--LRSANG 315
Query: 316 KYLAVDSFGNVTCEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLI-CTAKIP 374
YLA + + E + F++H + GK ++ G FLG +SD L+ IP
Sbjct: 316 YYLAQRRHRAIIADGHPMESDTFFRVHW-NCGKITLQSPN-GRFLGIASDGLLMANVTIP 373
Query: 375 ANPEYWLAHLAARPQVNLRSVGRKRFAHLSENLDEIHVDANIP 417
E A RP + LR GR + S + D + + + P
Sbjct: 374 GPNEELGIRFANRPFLVLR--GRYGYVGSSSDHDLLKCNMDQP 414
>sp|Q9NQT6|FSCN3_HUMAN Fascin-3 OS=Homo sapiens GN=FSCN3 PE=2 SV=1
Length = 498
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 134/352 (38%), Gaps = 43/352 (12%)
Query: 263 IGLINAQFKYLTAETFGFKINANGASLKKKQVWILEPANGGDTLSVY-LRSHLGKYLAVD 321
+GLI+ YLT E + A SL ++Q W + +N +T +V L+S G YL +
Sbjct: 18 VGLISWAGTYLTFEACKNTVTATAKSLGRRQTWEILVSNEHETQAVVRLKSVQGLYLLCE 77
Query: 322 SFGNVTCEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWL 381
G V F + KW + G +L ++ + CT+ + + W
Sbjct: 78 CDGTVCYGRPRTSHHGCFLLRFHRNSKWTLQCLISGRYLESNGKDVFCTSHVLSAYHMWT 137
Query: 382 AHLAARPQVNLRSVGRKRFAHLSENLDEIHVDANIPWGEDTLFTLEFRAEDSGKYAVHTC 441
A V L S + +A + I VDA +P E+ F L FR G Y + T
Sbjct: 138 PRPALHVHVILYSPIHRCYARADPTMGRIWVDAAVPCLEECGFLLHFR---DGCYHLETS 194
Query: 442 NNKYLSREGKLVDTCNANCLFSLEYHAGEFCFLYLFIWLRPIRSPATGQIALRDNSGAYL 501
+ +LS +L ++ F ++ G G +AL D G L
Sbjct: 195 THHFLSHVDRLFSQPSSQTAFHMQVRPG-------------------GLVALCDGEGGML 235
Query: 502 SPIGSKAILKTRSNTVTKDELFTLEDSLPQASFIAALNSKYVSVKQGQIALRDNSGAYLS 561
P G+ +L N + +E F L+ ++LR +G ++S
Sbjct: 236 YPQGTHLLLGMGCNPMRGEEWFILQHC------------------PTWVSLRSKTGRFIS 277
Query: 562 PIGSKAILKTRSNTVTKDELFTLE-DSLPQASFIAALNSKYVSVKQAALAFA 612
I + + S + + LF E DS + + N Y+S ++ A
Sbjct: 278 VIYDGEV-RAASERLNRMSLFQFECDSESPTVQLRSANGYYLSQRRHRAVMA 328
Score = 36.6 bits (83), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 64 YLTAETFGFKINANGASLKKKQDGVWILEPANGGDTLSVY-LRSHLGKYLAVDSFGNVTC 122
YLT E + A SL ++Q W + +N +T +V L+S G YL + G V
Sbjct: 27 YLTFEACKNTVTATAKSLGRRQ--TWEILVSNEHETQAVVRLKSVQGLYLLCECDGTVCY 84
Query: 123 EADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSDKLICTAKIPANPEYWLAHLAARP 182
F + KW + G +L ++ + CT+ + + W RP
Sbjct: 85 GRPRTSHHGCFLLRFHRNSKWTLQCLISGRYLESNGKDVFCTSHVLSAYHMW----TPRP 140
Query: 183 QL 184
L
Sbjct: 141 AL 142
>sp|Q9KA64|EFTS_BACHD Elongation factor Ts OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=tsf PE=3
SV=3
Length = 293
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 25/150 (16%)
Query: 267 NAQFKYLTAETFGFKINANGASLKKKQVWILEPANGGDTLSVYLRS---HLGKYLAVDSF 323
N F+ L AE + AS+++ + +P NGG+T+ Y+ S +G+ L++ F
Sbjct: 85 NENFQKLVAELASHLLEKRPASVEE---ALEQPFNGGETVQEYINSAIAKIGEKLSLRRF 141
Query: 324 GNVTCEADEKEPGSLFQIHVSDEGKWAFKNKTRGYFLGASSD----KLICTAKIPANPEY 379
E EKE G +F ++ G+ + +G SSD K I NP Y
Sbjct: 142 -----EIVEKEDGDVFGQYIHMGGRIGVLS-----VIGQSSDEELAKDIAMHVAAINPTY 191
Query: 380 WLAHLAARPQVNLRSVGRKRFAHLSENLDE 409
R QV+ V R+R + L+E
Sbjct: 192 -----VTRDQVSEDEVAREREVLKQQALNE 216
>sp|Q81JL3|LYTT_BACAN Sensory transduction protein LytT OS=Bacillus anthracis GN=lytT
PE=4 SV=1
Length = 246
Score = 32.7 bits (73), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 532 ASFIAALNSKYVSVKQGQIALRDNSGAYLSPIGSKAILKT-RSNTVTKDELFTLEDSLPQ 590
A A ++ + +++ + + Y+ + K +KT R VT D L LE LPQ
Sbjct: 133 ADVTAEMHKLALPIEESIVLVNIEDIVYVGLVDGKVTVKTVRETYVTHDTLVILEKKLPQ 192
Query: 591 ASFI 594
ASF+
Sbjct: 193 ASFM 196
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 243,527,920
Number of Sequences: 539616
Number of extensions: 10911635
Number of successful extensions: 22092
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 21967
Number of HSP's gapped (non-prelim): 71
length of query: 614
length of database: 191,569,459
effective HSP length: 124
effective length of query: 490
effective length of database: 124,657,075
effective search space: 61081966750
effective search space used: 61081966750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)