BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15564
(1041 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PO7|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His
341 Replaced By Cys
pdb|2PO7|B Chain B, Crystal Structure Of Human Ferrochelatase Mutant With His
341 Replaced By Cys
Length = 359
Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 149/219 (68%), Gaps = 14/219 (6%)
Query: 74 RPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPEVQKKYQE 133
+PKT ILMLNMGGP V ++L R+ D+D++ LP+Q KL P+IA+R TP++Q++Y+
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDQDLMTLPIQNKLAPFIAKRLTPKIQEQYRR 61
Query: 134 IGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDGAERV 193
IGGGSPI WT QGE M L+ + P PHK+Y+ FRY PLTEE ++++E+DG ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLER- 120
Query: 194 VIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRWSTHP 253
+ F+QYPQYSC+T+GSSLNAIY + N+ G + WS IDRW TH
Sbjct: 121 -------------AIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHH 167
Query: 254 LLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLRAL 292
LL + FA+ I +EL FP+E + +V+ILFSAHSLP+ +
Sbjct: 168 LLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVV 206
>pdb|2QD3|A Chain A, Wild Type Human Ferrochelatase Crystallized With Ammonium
Sulfate
pdb|2QD3|B Chain B, Wild Type Human Ferrochelatase Crystallized With Ammonium
Sulfate
pdb|2QD4|A Chain A, Wild Type Human Ferrochelatase Crystallized With Mncl2
pdb|2QD4|B Chain B, Wild Type Human Ferrochelatase Crystallized With Mncl2
pdb|2QD5|A Chain A, Structure Of Wild Type Human Ferrochelatase In Complex
With A Lead- Porphyrin Compound
pdb|2QD5|B Chain B, Structure Of Wild Type Human Ferrochelatase In Complex
With A Lead- Porphyrin Compound
pdb|3HCN|A Chain A, Hg And Protoporphyrin Bound Human Ferrochelatase
pdb|3HCN|B Chain B, Hg And Protoporphyrin Bound Human Ferrochelatase
pdb|3HCO|A Chain A, Human Ferrochelatase With Cd And Protoporphyrin Ix Bound
pdb|3HCO|B Chain B, Human Ferrochelatase With Cd And Protoporphyrin Ix Bound
pdb|3HCR|A Chain A, Human Ferrochelatase With Deuteroporphyrin And Ni Bound
pdb|3HCR|B Chain B, Human Ferrochelatase With Deuteroporphyrin And Ni Bound
Length = 359
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 150/219 (68%), Gaps = 14/219 (6%)
Query: 74 RPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPEVQKKYQE 133
+PKT ILMLNMGGP V ++L R+ DRD++ LP+Q KL P+IA+RRTP++Q++Y+
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRR 61
Query: 134 IGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDGAERV 193
IGGGSPI WT QGE M L+ + P PHK+Y+ FRY PLTEE ++++E+DG ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLER- 120
Query: 194 VIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRWSTHP 253
+ F+QYPQYSC+T+GSSLNAIY + N+ G + WS IDRW TH
Sbjct: 121 -------------AIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHH 167
Query: 254 LLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLRAL 292
LL + FA+ I +EL FP+E + +V+ILFSAHSLP+ +
Sbjct: 168 LLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVV 206
>pdb|2HRE|A Chain A, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2HRE|B Chain B, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2HRE|C Chain C, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2HRE|D Chain D, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2QD1|A Chain A, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
pdb|2QD1|B Chain B, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
pdb|2QD1|C Chain C, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
pdb|2QD1|D Chain D, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
Length = 359
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 150/219 (68%), Gaps = 14/219 (6%)
Query: 74 RPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPEVQKKYQE 133
+PKT ILMLNMGGP V ++L R+ DRD++ LP+Q KL P+IA+RRTP++Q++Y+
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRR 61
Query: 134 IGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDGAERV 193
IGGGSPI WT QGE M L+ + P PHK+Y+ FRY PLTEE ++++E+DG ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLER- 120
Query: 194 VIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRWSTHP 253
+ F+QYPQYSC+T+GSSLNAIY + N+ G + WS IDRW TH
Sbjct: 121 -------------AIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHH 167
Query: 254 LLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLRAL 292
LL + FA+ I +EL FP+E + +V+ILFSAHSLP+ +
Sbjct: 168 LLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVV 206
>pdb|4F4D|A Chain A, F337r Variant Of Human Ferrochelatase
pdb|4F4D|B Chain B, F337r Variant Of Human Ferrochelatase
Length = 359
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 149/216 (68%), Gaps = 14/216 (6%)
Query: 74 RPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPEVQKKYQE 133
+PKT ILMLNMGGP V ++L R+ DRD++ LP+Q KL P+IA+RRTP++Q++Y+
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRR 61
Query: 134 IGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDGAERV 193
IGGGSPI WT QGE M L+ + P PHK+Y+ FRY PLTEE ++++E+DG ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLER- 120
Query: 194 VIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRWSTHP 253
+ F+QYPQYSC+T+GSSLNAIY + N+ G + WS IDRW TH
Sbjct: 121 -------------AIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHH 167
Query: 254 LLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPL 289
LL + FA+ I +EL FP+E + +V+ILFSAHSLP+
Sbjct: 168 LLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPM 203
>pdb|2QD2|A Chain A, F110a Variant Of Human Ferrochelatase With Protoheme Bound
pdb|2QD2|B Chain B, F110a Variant Of Human Ferrochelatase With Protoheme Bound
pdb|3HCP|A Chain A, Human Ferrochelatase With Mn And Deuteroporphyrin Bound
pdb|3HCP|B Chain B, Human Ferrochelatase With Mn And Deuteroporphyrin Bound
Length = 359
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 148/216 (68%), Gaps = 14/216 (6%)
Query: 74 RPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPEVQKKYQE 133
+PKT ILMLNMGGP V ++L R+ DRD++ LP+Q KL P IA+RRTP++Q++Y+
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPAIAKRRTPKIQEQYRR 61
Query: 134 IGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDGAERV 193
IGGGSPI WT QGE M L+ + P PHK+Y+ FRY PLTEE ++++E+DG ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLER- 120
Query: 194 VIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRWSTHP 253
+ F+QYPQYSC+T+GSSLNAIY + N+ G + WS IDRW TH
Sbjct: 121 -------------AIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHH 167
Query: 254 LLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPL 289
LL + FA+ I +EL FP+E + +V+ILFSAHSLP+
Sbjct: 168 LLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPM 203
>pdb|1HRK|A Chain A, Crystal Structure Of Human Ferrochelatase
pdb|1HRK|B Chain B, Crystal Structure Of Human Ferrochelatase
pdb|2HRC|A Chain A, 1.7 Angstrom Structure Of Human Ferrochelatase Variant
R115l
pdb|2HRC|B Chain B, 1.7 Angstrom Structure Of Human Ferrochelatase Variant
R115l
Length = 359
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 149/219 (68%), Gaps = 14/219 (6%)
Query: 74 RPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPEVQKKYQE 133
+PKT ILMLNMGGP V ++L R+ DRD++ LP+Q KL P+IA+R TP++Q++Y+
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRLTPKIQEQYRR 61
Query: 134 IGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDGAERV 193
IGGGSPI WT QGE M L+ + P PHK+Y+ FRY PLTEE ++++E+DG ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLER- 120
Query: 194 VIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRWSTHP 253
+ F+QYPQYSC+T+GSSLNAIY + N+ G + WS IDRW TH
Sbjct: 121 -------------AIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHH 167
Query: 254 LLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLRAL 292
LL + FA+ I +EL FP+E + +V+ILFSAHSLP+ +
Sbjct: 168 LLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVV 206
>pdb|2PNJ|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With Phe
337 Replaced By Ala
pdb|2PNJ|B Chain B, Crystal Structure Of Human Ferrochelatase Mutant With Phe
337 Replaced By Ala
Length = 359
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 149/219 (68%), Gaps = 14/219 (6%)
Query: 74 RPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPEVQKKYQE 133
+PKT ILMLNMGGP V ++L R+ DRD++ LP+Q KL P+IA+R TP++Q++Y+
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRLTPKIQEQYRR 61
Query: 134 IGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDGAERV 193
IGGGSPI WT QGE M L+ + P PHK+Y+ FRY PLTEE ++++E+DG ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLER- 120
Query: 194 VIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRWSTHP 253
+ F+QYPQYSC+T+GSSLNAIY + N+ G + WS IDRW TH
Sbjct: 121 -------------AIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHH 167
Query: 254 LLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLRAL 292
LL + FA+ I +EL FP+E + +V+ILFSAHSLP+ +
Sbjct: 168 LLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVV 206
>pdb|3AQI|A Chain A, H240a Variant Of Human Ferrochelatase
pdb|3AQI|B Chain B, H240a Variant Of Human Ferrochelatase
Length = 359
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 149/219 (68%), Gaps = 14/219 (6%)
Query: 74 RPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPEVQKKYQE 133
+PKT ILMLNMGGP V ++L R+ DRD++ LP+Q KL P+IA+R TP++Q++Y+
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRLTPKIQEQYRR 61
Query: 134 IGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDGAERV 193
IGGGSPI WT QGE M L+ + P PHK+Y+ FRY PLTEE ++++E+DG ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLER- 120
Query: 194 VIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRWSTHP 253
+ F+QYPQYSC+T+GSSLNAIY + N+ G + WS IDRW TH
Sbjct: 121 -------------AIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHH 167
Query: 254 LLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLRAL 292
LL + FA+ I +EL FP+E + +V+ILFSAHSLP+ +
Sbjct: 168 LLIQCFADAILKELDHFPLEKRSEVVILFSAHSLPMSVV 206
>pdb|2PO5|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His
263 Replaced By Cys
pdb|2PO5|B Chain B, Crystal Structure Of Human Ferrochelatase Mutant With His
263 Replaced By Cys
Length = 359
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 148/219 (67%), Gaps = 14/219 (6%)
Query: 74 RPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPEVQKKYQE 133
+PKT ILMLNMGGP V ++L R+ DRD++ LP+Q KL P+IA+R TP++Q++Y+
Sbjct: 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRLTPKIQEQYRR 61
Query: 134 IGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDGAERV 193
IGGGSPI WT QGE M L+ + P PHK+Y+ FRY PLTEE ++++E+DG ER
Sbjct: 62 IGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLER- 120
Query: 194 VIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRWSTHP 253
+ F+QYPQYSC+T+GSSLNAIY + N+ G + WS IDRW TH
Sbjct: 121 -------------AIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHH 167
Query: 254 LLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLRAL 292
LL + FA+ I +EL FP+E + +V+ILFSA SLP+ +
Sbjct: 168 LLIQCFADHILKELDHFPLEKRSEVVILFSACSLPMSVV 206
>pdb|1L8X|A Chain A, Crystal Structure Of Ferrochelatase From The Yeast,
Saccharomyces Cerevisiae, With Cobalt(Ii) As The
Substrate Ion
pdb|1L8X|B Chain B, Crystal Structure Of Ferrochelatase From The Yeast,
Saccharomyces Cerevisiae, With Cobalt(Ii) As The
Substrate Ion
pdb|1LBQ|A Chain A, The Crystal Structure Of Saccharomyces Cerevisiae
Ferrochelatase
pdb|1LBQ|B Chain B, The Crystal Structure Of Saccharomyces Cerevisiae
Ferrochelatase
Length = 362
Score = 202 bits (514), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 144/223 (64%), Gaps = 16/223 (7%)
Query: 74 RPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPV--QGKLGPYIARRRTPEVQKKY 131
R T I+++NMGGP+ ++ ++L+++ D D+I + Q + YIA+ RTP+++K+Y
Sbjct: 5 RSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIEKQY 64
Query: 132 QEIGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDGAE 191
+EIGGGSPI KW++ Q ++ L+ CPE PHK YVAFRYA PLT ET Q+ KDG
Sbjct: 65 REIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDG-- 122
Query: 192 RVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRWST 251
++ V FSQYP +S +T+GSS+N ++ + S +ISWS+IDRW T
Sbjct: 123 ------------VKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPT 170
Query: 252 HPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLRALVT 294
+ L K F+E I ++L++FP V+ V++LFSAHSLP+ + T
Sbjct: 171 NEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNT 213
>pdb|3GOQ|A Chain A, Crystal Structure Of The Tyr13met Variant Of Bacillus
Subtilis Ferrochelatase
Length = 310
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 92/225 (40%), Gaps = 43/225 (19%)
Query: 72 ITRPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPE----- 126
++R K +L++ MG P + + Y +I R R PE
Sbjct: 1 MSRKKMGLLVMAMGTPYKEEDIERYY-------------------THIRRGRKPEPEMLQ 41
Query: 127 -VQKKYQEIGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQI 185
++ +Y+ IGG SP+ + T+ Q + LN + E K Y+ ++ +P E+ + ++
Sbjct: 42 DLKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDEIT-FKAYIGLKHIEPFIEDAVAEM 100
Query: 186 EKDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSL 245
KDG V +V+ + +S + L ++ +
Sbjct: 101 HKDGITEAV-----------SIVLAPHFSTFSVQSYNKRAKEEAEKLG------GLTITS 143
Query: 246 IDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLR 290
++ W P + +R++E P + +++ +++ SAHSLP +
Sbjct: 144 VESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEK 188
>pdb|1C9E|A Chain A, Structure Of Ferrochelatase With Copper(Ii) N-
Methylmesoporphyrin Complex Bound At The Active Site
Length = 306
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 24/177 (13%)
Query: 118 YIARRRTPE------VQKKYQEIGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAF 171
+I R R PE ++ +Y+ IGG SP+ + T+ Q + LN + E K Y+
Sbjct: 24 HIRRGRKPEPEMLQDLKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDEI-TFKAYIGL 82
Query: 172 RYADPLTEETLDQIEKDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTH 231
++ +P E+ + ++ KDG V P V +++ + G
Sbjct: 83 KHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLGG-------- 134
Query: 232 LNKKGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLP 288
++ + ++ W P + +R++E P + +++ +++ SAHSLP
Sbjct: 135 ---------LTITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLP 182
>pdb|1C1H|A Chain A, Crystal Structure Of Bacillus Subtilis Ferrochelatase In
Complex With N-Methyl Mesoporphyrin
pdb|1LD3|A Chain A, Crystal Structure Of B. Subilis Ferrochelatase With Zn(2+)
Bound At The Active Site.
pdb|1N0I|A Chain A, Crystal Structure Of Ferrochelatase With Cadmium Bound At
Active Site
pdb|2HK6|A Chain A, Crystal Structure Of B. Subtilis Ferrochelatase With Iron
Bound At The Active Site
pdb|1AK1|A Chain A, Ferrochelatase From Bacillus Subtilis
Length = 310
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 91/225 (40%), Gaps = 43/225 (19%)
Query: 72 ITRPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPE----- 126
++R K +L++ G P + + Y +I R R PE
Sbjct: 1 MSRKKMGLLVMAYGTPYKEEDIERYY-------------------THIRRGRKPEPEMLQ 41
Query: 127 -VQKKYQEIGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQI 185
++ +Y+ IGG SP+ + T+ Q + LN + E K Y+ ++ +P E+ + ++
Sbjct: 42 DLKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDEIT-FKAYIGLKHIEPFIEDAVAEM 100
Query: 186 EKDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSL 245
KDG V +V+ + +S + L ++ +
Sbjct: 101 HKDGITEAV-----------SIVLAPHFSTFSVQSYNKRAKEEAEKLG------GLTITS 143
Query: 246 IDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLR 290
++ W P + +R++E P + +++ +++ SAHSLP +
Sbjct: 144 VESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEK 188
>pdb|2AC2|A Chain A, Crystal Structure Of The Tyr13phe Mutant Variant Of
Bacillus Subtilis Ferrochelatase With Zn(2+) Bound At
The Active Site
Length = 309
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 90/224 (40%), Gaps = 43/224 (19%)
Query: 73 TRPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPE------ 126
+R K +L++ G P + + Y +I R R PE
Sbjct: 1 SRKKMGLLVMAFGTPYKEEDIERYY-------------------THIRRGRKPEPEMLQD 41
Query: 127 VQKKYQEIGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIE 186
++ +Y+ IGG SP+ + T+ Q + LN + E K Y+ ++ +P E+ + ++
Sbjct: 42 LKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDEIT-FKAYIGLKHIEPFIEDAVAEMH 100
Query: 187 KDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLI 246
KDG V +V+ + +S + L ++ + +
Sbjct: 101 KDGITEAV-----------SIVLAPHFSTFSVQSYNKRAKEEAEKLG------GLTITSV 143
Query: 247 DRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLR 290
+ W P + +R++E P + +++ +++ SAHSLP +
Sbjct: 144 ESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEK 187
>pdb|1DOZ|A Chain A, Crystal Structure Of Ferrochelatase
pdb|2Q2N|A Chain A, Crystal Structure Of Bacillus Subtilis Ferrochelatase In
Complex With Deuteroporphyrin Ix 2,4-Disulfonic Acid
Dihydrochloride
pdb|3M4Z|A Chain A, Crystal Structure Of B. Subtilis Ferrochelatase With
Cobalt Bound At The Active Site
Length = 309
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 90/224 (40%), Gaps = 43/224 (19%)
Query: 73 TRPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPE------ 126
+R K +L++ G P + + Y +I R R PE
Sbjct: 1 SRKKMGLLVMAYGTPYKEEDIERYY-------------------THIRRGRKPEPEMLQD 41
Query: 127 VQKKYQEIGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIE 186
++ +Y+ IGG SP+ + T+ Q + LN + E K Y+ ++ +P E+ + ++
Sbjct: 42 LKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDEIT-FKAYIGLKHIEPFIEDAVAEMH 100
Query: 187 KDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLI 246
KDG V +V+ + +S + L ++ + +
Sbjct: 101 KDGITEAV-----------SIVLAPHFSTFSVQSYNKRAKEEAEKLG------GLTITSV 143
Query: 247 DRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLR 290
+ W P + +R++E P + +++ +++ SAHSLP +
Sbjct: 144 ESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEK 187
>pdb|2H1V|A Chain A, Crystal Structure Of The Lys87ala Mutant Variant Of
Bacillus Subtilis Ferrochelatase
Length = 310
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 90/225 (40%), Gaps = 43/225 (19%)
Query: 72 ITRPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPE----- 126
++R K +L++ G P + + Y +I R R PE
Sbjct: 1 MSRKKMGLLVMAYGTPYKEEDIERYY-------------------THIRRGRKPEPEMLQ 41
Query: 127 -VQKKYQEIGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQI 185
++ +Y+ IGG SP+ + T+ Q + LN + E K Y+ + +P E+ + ++
Sbjct: 42 DLKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDEIT-FKAYIGLAHIEPFIEDAVAEM 100
Query: 186 EKDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSL 245
KDG V +V+ + +S + L ++ +
Sbjct: 101 HKDGITEAV-----------SIVLAPHFSTFSVQSYNKRAKEEAEKLG------GLTITS 143
Query: 246 IDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLR 290
++ W P + +R++E P + +++ +++ SAHSLP +
Sbjct: 144 VESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEK 188
>pdb|2C8J|A Chain A, Crystal Structure Of Ferrochelatase Hemh-1 From Bacillus
Anthracis, Str. Ames
pdb|2C8J|B Chain B, Crystal Structure Of Ferrochelatase Hemh-1 From Bacillus
Anthracis, Str. Ames
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 39/219 (17%)
Query: 74 RPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPE----VQK 129
+ K +L++ G P + + Y I R+ +PE + +
Sbjct: 2 KKKIGLLVMAYGTPYKEEDIERYYTHIRR-----------------GRKPSPEMLEDLTE 44
Query: 130 KYQEIGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDG 189
+Y+ IGG SP+ T Q +K+ +LN V E H Y+ ++ +P E+ + ++ DG
Sbjct: 45 RYRAIGGISPLATITLEQAKKLEKRLNEVQDEVEYHM-YLGLKHIEPFIEDAVKEMHNDG 103
Query: 190 AERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRW 249
QD V+ P YS + S + K G N++ ID W
Sbjct: 104 I----------QDAIALVLA----PHYSTFSVKSYVGRAQEEAEKLG---NLTIHGIDSW 146
Query: 250 STHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLP 288
P + + + ++ ++ +++ SAHSLP
Sbjct: 147 YKEPKFIQYWVDAVKSIYSGMSDAEREKAVLIVSAHSLP 185
>pdb|2H1W|A Chain A, Crystal Structure Of The His183ala Mutant Variant Of
Bacillus Subtilis Ferrochelatase
Length = 310
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 90/225 (40%), Gaps = 43/225 (19%)
Query: 72 ITRPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPE----- 126
++R K +L++ G P + + Y +I R R PE
Sbjct: 1 MSRKKMGLLVMAYGTPYKEEDIERYY-------------------THIRRGRKPEPEMLQ 41
Query: 127 -VQKKYQEIGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQI 185
++ +Y+ IGG SP+ + T+ Q + LN + E K Y+ ++ +P E+ + ++
Sbjct: 42 DLKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDEIT-FKAYIGLKHIEPFIEDAVAEM 100
Query: 186 EKDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSL 245
KDG V +V+ + +S + L ++ +
Sbjct: 101 HKDGITEAV-----------SIVLAPHFSTFSVQSYNKRAKEEAEKLG------GLTITS 143
Query: 246 IDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLR 290
++ W P + +R++E P + +++ +++ SA SLP +
Sbjct: 144 VESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAASLPEK 188
>pdb|2Q3J|A Chain A, Crystal Structure Of The His183ala Variant Of Bacillus
Subtilis Ferrochelatase In Complex With N-Methyl
Mesoporphyrin
Length = 309
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 89/224 (39%), Gaps = 43/224 (19%)
Query: 73 TRPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPE------ 126
+R K +L++ G P + + Y +I R R PE
Sbjct: 1 SRKKMGLLVMAYGTPYKEEDIERYY-------------------THIRRGRKPEPEMLQD 41
Query: 127 VQKKYQEIGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIE 186
++ +Y+ IGG SP+ + T+ Q + LN + E K Y+ ++ +P E+ + ++
Sbjct: 42 LKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDEIT-FKAYIGLKHIEPFIEDAVAEMH 100
Query: 187 KDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLI 246
KDG V +V+ + +S + L ++ + +
Sbjct: 101 KDGITEAV-----------SIVLAPHFSTFSVQSYNKRAKEEAEKLG------GLTITSV 143
Query: 247 DRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLR 290
+ W P + +R++E P + +++ +++ SA SLP +
Sbjct: 144 ESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAASLPEK 187
>pdb|2AC4|A Chain A, Crystal Structure Of The His183cys Mutant Variant Of
Bacillus Subtilis Ferrochelatase
pdb|2Q2O|A Chain A, Crystal Structure Of H183c Bacillus Subtilis
Ferrochelatase In Complex With Deuteroporphyrin Ix
2,4-Disulfonic Acid Dihydrochloride
Length = 309
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 89/224 (39%), Gaps = 43/224 (19%)
Query: 73 TRPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPE------ 126
+R K +L++ G P + + Y +I R R PE
Sbjct: 1 SRKKMGLLVMAYGTPYKEEDIERYY-------------------THIRRGRKPEPEMLQD 41
Query: 127 VQKKYQEIGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIE 186
++ +Y+ IGG SP+ + T+ Q + LN + E K Y+ ++ +P E+ + ++
Sbjct: 42 LKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDEIT-FKAYIGLKHIEPFIEDAVAEMH 100
Query: 187 KDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLI 246
KDG V +V+ + +S + L ++ + +
Sbjct: 101 KDGITEAV-----------SIVLAPHFSTFSVQSYNKRAKEEAEKLG------GLTITSV 143
Query: 247 DRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLR 290
+ W P + +R++E P + +++ +++ SA SLP +
Sbjct: 144 ESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSACSLPEK 187
>pdb|3HHE|A Chain A, Crystal Structure Of Ribose-5-Phosphate Isomerase A From
Bartonella Henselae
pdb|3HHE|B Chain B, Crystal Structure Of Ribose-5-Phosphate Isomerase A From
Bartonella Henselae
Length = 255
Score = 30.8 bits (68), Expect = 4.0, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 134 IGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEK-----D 188
IG GS + ++ L GE++AN L C + + ++ P++ TL++I + D
Sbjct: 47 IGSGSTVNEFIPLLGERVANGLRVTCVATSQYSEQLCHKFGVPIS--TLEKIPELDLDID 104
Query: 189 GAERV 193
GA+ +
Sbjct: 105 GADEI 109
>pdb|1QFM|A Chain A, Prolyl Oligopeptidase From Porcine Muscle
Length = 710
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 165 HKHYVAFRYA---DPLTEETLDQIEKDGAERVVIFSQYPQDG--AERVVIFSQYPQYSC 218
H H V YA DP +E+T +E V Q P G ER+ YP+YSC
Sbjct: 20 HGHKVXDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQXPIRGLYKERMTELYDYPKYSC 78
>pdb|1O6G|A Chain A, Prolyl Oligopeptidase From Porcine Brain, D641n Mutant
With Bound Peptide Ligand Suc-Gly-Pro
Length = 710
Score = 29.6 bits (65), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 165 HKHYVAFRYA---DPLTEETLDQIEKDGAERVVIFSQYPQDG--AERVVIFSQYPQYSC 218
H H V YA DP +E+T +E V Q P G ER+ YP+YSC
Sbjct: 20 HGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPKYSC 78
>pdb|1E5T|A Chain A, Prolyl Oligopeptidase From Porcine Brain, Mutant
Length = 710
Score = 29.6 bits (65), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 165 HKHYVAFRYA---DPLTEETLDQIEKDGAERVVIFSQYPQDG--AERVVIFSQYPQYSC 218
H H V YA DP +E+T +E V Q P G ER+ YP+YSC
Sbjct: 20 HGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPKYSC 78
>pdb|1O6F|A Chain A, Prolyl Oligopeptidase From Porcine Brain, D641a Mutant
With Bound Peptide Ligand Suc-Gly-Pro
Length = 710
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 165 HKHYVAFRYA---DPLTEETLDQIEKDGAERVVIFSQYPQDG--AERVVIFSQYPQYSC 218
H H V YA DP +E+T +E V Q P G ER+ YP+YSC
Sbjct: 20 HGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPKYSC 78
>pdb|1VZ3|A Chain A, Prolyl Oligopeptidase From Porcine Brain, T597c Mutant
Length = 710
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 165 HKHYVAFRYA---DPLTEETLDQIEKDGAERVVIFSQYPQDG--AERVVIFSQYPQYSC 218
H H V YA DP +E+T +E V Q P G ER+ YP+YSC
Sbjct: 20 HGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPKYSC 78
>pdb|4AX4|A Chain A, Prolyl Oligopeptidase From Porcine Brain, H680a Mutant
Length = 710
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 165 HKHYVAFRYA---DPLTEETLDQIEKDGAERVVIFSQYPQDG--AERVVIFSQYPQYSC 218
H H V YA DP +E+T +E V Q P G ER+ YP+YSC
Sbjct: 20 HGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPKYSC 78
>pdb|1H2X|A Chain A, Prolyl Oligopeptidase From Porcine Brain, Y473f Mutant
pdb|1H2Y|A Chain A, Prolyl Oligopeptidase From Porcine Brain, Y473f Mutant
With Covalently Bound Inhibitor Z-Pro-Prolinal
Length = 710
Score = 29.6 bits (65), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 165 HKHYVAFRYA---DPLTEETLDQIEKDGAERVVIFSQYPQDG--AERVVIFSQYPQYSC 218
H H V YA DP +E+T +E V Q P G ER+ YP+YSC
Sbjct: 20 HGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPKYSC 78
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,295,101
Number of Sequences: 62578
Number of extensions: 1252842
Number of successful extensions: 2560
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2504
Number of HSP's gapped (non-prelim): 49
length of query: 1041
length of database: 14,973,337
effective HSP length: 109
effective length of query: 932
effective length of database: 8,152,335
effective search space: 7597976220
effective search space used: 7597976220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)