Query psy15564
Match_columns 1041
No_of_seqs 435 out of 1369
Neff 6.6
Searched_HMMs 29240
Date Sat Aug 17 00:30:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15564.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15564hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hcn_A Ferrochelatase, mitocho 100.0 3.3E-40 1.1E-44 373.2 11.9 274 32-327 2-327 (359)
2 1lbq_A Ferrochelatase; rossman 100.0 1.4E-38 4.9E-43 361.2 9.6 274 31-327 4-328 (362)
3 2h1v_A Ferrochelatase; rossman 100.0 1.1E-32 3.7E-37 308.5 5.4 263 32-323 3-305 (310)
4 3hcn_A Ferrochelatase, mitocho 100.0 1.2E-31 4.2E-36 303.1 13.2 205 74-292 2-206 (359)
5 1lbq_A Ferrochelatase; rossman 100.0 2.5E-29 8.5E-34 285.5 13.0 205 74-292 5-211 (362)
6 2h1v_A Ferrochelatase; rossman 99.9 3.6E-24 1.2E-28 239.6 9.8 187 75-292 4-190 (310)
7 2x19_B Importin-13; nuclear tr 98.7 5E-07 1.7E-11 115.1 21.3 168 814-1010 740-909 (963)
8 2xvy_A Chelatase, putative; me 97.9 3.1E-05 1.1E-09 84.4 10.7 103 164-289 41-158 (269)
9 2xvy_A Chelatase, putative; me 97.5 0.00015 5.3E-09 78.9 9.0 231 30-323 5-262 (269)
10 2xwp_A Sirohydrochlorin cobalt 96.7 0.017 5.9E-07 62.6 14.7 157 136-322 10-188 (264)
11 3gjx_A Exportin-1; transport, 96.7 0.1 3.4E-06 67.2 23.3 106 810-925 798-903 (1073)
12 4hat_C Exportin-1; heat repeat 96.6 0.26 8.7E-06 63.4 26.2 86 844-929 796-881 (1023)
13 1w9c_A CRM1 protein, exportin 96.4 0.086 3E-06 58.4 17.5 87 842-928 112-198 (321)
14 2x1g_F Cadmus; transport prote 94.7 0.64 2.2E-05 59.0 19.2 127 860-1010 793-921 (971)
15 2jh3_A Ribosomal protein S2-re 93.4 0.073 2.5E-06 62.4 6.0 140 135-299 10-164 (474)
16 3lyh_A Cobalamin (vitamin B12) 93.0 0.71 2.4E-05 43.8 11.4 86 166-269 37-123 (126)
17 3m1i_C Exportin-1; heat repeat 92.8 1.2 4.2E-05 57.1 16.8 131 860-1009 812-964 (1049)
18 1tjn_A Sirohydrochlorin cobalt 91.2 0.33 1.1E-05 48.2 6.8 86 165-268 57-148 (156)
19 2xws_A Sirohydrochlorin cobalt 89.0 0.51 1.8E-05 45.0 5.9 85 165-267 36-126 (133)
20 2xwp_A Sirohydrochlorin cobalt 88.4 5 0.00017 43.0 13.9 70 248-322 170-252 (264)
21 2jh3_A Ribosomal protein S2-re 85.9 0.36 1.2E-05 56.5 3.3 98 210-323 149-262 (474)
22 3a6p_A Exportin-5; exportin-5, 66.5 2.5E+02 0.0084 36.5 21.8 32 577-610 249-280 (1204)
23 4fdd_A Transportin-1; heat rep 53.6 3.8E+02 0.013 32.7 20.4 156 865-1030 642-821 (852)
24 3ibv_A Exportin-T; karyopherin 41.3 1.7E+02 0.0057 37.2 13.6 68 860-927 801-871 (980)
25 4g4s_P Proteasome assembly cha 25.9 26 0.00088 37.7 2.0 28 401-428 242-269 (269)
No 1
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=100.00 E-value=3.3e-40 Score=373.17 Aligned_cols=274 Identities=24% Similarity=0.296 Sum_probs=211.3
Q ss_pred CCceEEEEEecCCCCCcchhHHHHhhhcCccccccCCCCCCC--------chhHHHHHHhcCCCCChHH----HHHHHHh
Q psy15564 32 KPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGIT--------RPKTAILMLNMGGPTHTDQ----VSEYLHR 99 (1041)
Q Consensus 32 ~~k~aVlLlNlGGP~s~~~V~~FL~nlFsD~~II~~p~~~~l--------~~k~avly~~iGGpSpl~~----l~~fL~~ 99 (1041)
++|+||||+|||||+++++|+|||+|||+||+||++|++++| .+|++..|..|||+||+.. +.+.|++
T Consensus 2 ~~k~gVLL~nlG~P~~~~~V~~fL~~~~~d~~Vi~~P~~~~L~~~I~~~R~~k~~~~Y~~igggSPL~~~t~~Q~~~L~~ 81 (359)
T 3hcn_A 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVK 81 (359)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHHTCTTTCCCTTHHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCHHHHHHHHHHHccCCcccccchHHHHhHHhcccchHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999999876555 5799999999999999953 3333433
Q ss_pred hcCC------CCce--eCCCccch-hhhhcccCChhhH--------HhhhccCCCChHHHHHHHHHHHHHHHhhhcCCCC
Q psy15564 100 IMTD------RDMI--QLPVQGKL-GPYIARRRTPEVQ--------KKYQEIGGGSPILKWTQLQGEKMANKLNSVCPEY 162 (1041)
Q Consensus 100 ~l~d------~~vi--~~py~~Pl-~~~I~~~r~~~~~--------~qYs~ittgSpl~~~t~~qa~~L~~~L~~~~~~~ 162 (1041)
.+.+ +..+ .|.||+|+ ...+...+..+++ ||||.+|+||.++.+.+...+ .-. .
T Consensus 82 ~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttgs~~~~~~~~~~~----~~~-----~ 152 (359)
T 3hcn_A 82 LLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQ----VGR-----K 152 (359)
T ss_dssp HHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHH----TTC-----C
T ss_pred HHhhhcccccCceEEEEEeeCCCCHHHHHHHHHhcCCCeEEEEECCccccccchhhHHHHHHHHHHH----hcc-----C
Confidence 3321 1122 36899997 6777777666665 899999999999998876432 100 1
Q ss_pred CCceEEEEec-CCCc-cHHHHHHHHHH----cCC----cEEEEeecCCCCCCcceee-ccCchhHHHHhHHHHHHHHHHH
Q psy15564 163 GPHKHYVAFR-YADP-LTEETLDQIEK----DGA----ERVVIFSQYPQDGAERVVI-FSQYPQYSCATSGSSLNAIYTH 231 (1041)
Q Consensus 163 ~~~~v~~a~r-y~~P-~I~~~l~~l~~----~g~----~~illfSahP~~~~~~iv~-gd~YP~~s~~Tt~s~~~~v~e~ 231 (1041)
+...+.++-+ |.|| +|++..+.+++ .+. +..|+|||| |+|.+++. ||||+.+|..|+. .+++.
T Consensus 153 ~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaH--giP~~~~~~GDpY~~q~~~t~~----lv~e~ 226 (359)
T 3hcn_A 153 PTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAH--SLPMSVVNRGDPYPQEVSATVQ----KVMER 226 (359)
T ss_dssp CSSEEEEECCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEE--CCBHHHHTTTCSHHHHHHHHHH----HHHHH
T ss_pred CCCceEEeCCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcC--CChHhhcccCCCHHHHHHHHHH----HHHHH
Confidence 1234566555 7788 88888886643 221 235889998 99988777 9999999999986 55566
Q ss_pred HhhcCCCCCcceeeecCCCCChhHHHHHHHHHHHHHhhCCCCCCCceEEE-EeeecchhhhHHHHHHHH----------h
Q psy15564 232 LNKKGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIIL-FSAHSLPLRALVTLFARI----------T 300 (1041)
Q Consensus 232 L~~~~~~~~l~~qsI~r~g~~pwl~pat~d~I~~~l~~~~~~g~~~v~lV-~SfHS~~~~tl~eL~~~i----------t 300 (1041)
++.. .++.++||| |+|+.||+.|+|.++|++ +.+ +|.++++|+ ++|+|||+|||+|++.|. +
T Consensus 227 Lg~~-~~~~l~~QS--r~G~~~WL~P~t~d~l~~-L~~---~G~k~vvv~P~gFvsD~lETL~Eid~E~~~e~a~e~G~~ 299 (359)
T 3hcn_A 227 LEYC-NPYRLVWQS--KVGPMPWLGPQTDESIKG-LCE---RGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVE 299 (359)
T ss_dssp TTTC-SCEEEEEEC--CSCSSCBSSSBHHHHHHH-HHH---TTCCEEEEECTTCCSCCCCCHHHHCHHHHHHHHHHTCCC
T ss_pred cCCC-CCEEEEEEc--CCCCCCCCCCCHHHHHHH-HHH---cCCCeEEEECCccchhhHHhHHHHHHHHHHHHHHhCCCc
Confidence 6542 346799999 999999999999999966 333 244578888 899999999999995432 3
Q ss_pred hcccccCCCCCHHHHHHHHHHH-HHHHH
Q psy15564 301 KLGWFDSEKDEFVFRNVIQDVS-NFLQV 327 (1041)
Q Consensus 301 kl~~~~~ln~~~~Fi~~l~~l~-~~lQ~ 327 (1041)
+|.++||+|++|.|+++|++++ +.++.
T Consensus 300 ~~~rip~LNd~p~fi~~La~lv~~~l~~ 327 (359)
T 3hcn_A 300 NIRRAESLNGNPLFSKALADLVHSHIQS 327 (359)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHHHHHHH
T ss_pred eEEEcCCCCCCHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999998 57765
No 2
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=100.00 E-value=1.4e-38 Score=361.20 Aligned_cols=274 Identities=19% Similarity=0.230 Sum_probs=210.8
Q ss_pred CCCceEEEEEecCCCCCcchhHHHHhhhcCccccccCC--CCCCC--------chhHHHHHHhcCCCCChHH----HHHH
Q psy15564 31 SKPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLP--VQGIT--------RPKTAILMLNMGGPTHTDQ----VSEY 96 (1041)
Q Consensus 31 ~~~k~aVlLlNlGGP~s~~~V~~FL~nlFsD~~II~~p--~~~~l--------~~k~avly~~iGGpSpl~~----l~~f 96 (1041)
+++|+||||+|||||+++++|+|||+|||+||+||++| +++++ .+|++..|..|||+||+.. +.+.
T Consensus 4 ~~~k~gvLL~nlG~P~~~~~V~~fL~~~~~d~~vi~~p~~~~~~l~~~I~~~R~~k~~~~Y~~ig~gSPL~~~t~~q~~~ 83 (362)
T 1lbq_A 4 KRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQATE 83 (362)
T ss_dssp -CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSSSHHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHHHH
T ss_pred CCCceEEEEEECCCCCCHHHHHHHHHHhccCCccccCCHHHHHHHhhhcCccchHHHHHHHHHcCCCCccHHHHHHHHHH
Confidence 57899999999999999999999999999999999996 44444 5799999999999999943 3444
Q ss_pred HHhhcC------CCC-c-eeCCCccch-hhhhcccCChhhH--------HhhhccCCCChHHHHHHHHHHHHHHHhhhcC
Q psy15564 97 LHRIMT------DRD-M-IQLPVQGKL-GPYIARRRTPEVQ--------KKYQEIGGGSPILKWTQLQGEKMANKLNSVC 159 (1041)
Q Consensus 97 L~~~l~------d~~-v-i~~py~~Pl-~~~I~~~r~~~~~--------~qYs~ittgSpl~~~t~~qa~~L~~~L~~~~ 159 (1041)
|++.+. +.. | +.|.||+|+ ...+...+..+++ |||+.+|+||..+++.+...+. +.
T Consensus 84 L~~~L~~~~~~~~~~~V~~amry~~P~i~d~l~~l~~~G~~~ivvlPlyPqyS~~ttgs~~~~i~~~l~~~-----~~-- 156 (362)
T 1lbq_A 84 VCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKAL-----DS-- 156 (362)
T ss_dssp HHHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHH-----CT--
T ss_pred HHHHHHhhcccCCCceEEeecccCCCCHHHHHHHHHHcCCCeEEEEecchhccccchhHHHHHHHHHHHhc-----cc--
Confidence 444442 111 2 236799996 6777777776666 7999999999999988765431 10
Q ss_pred CCCCCceEEEEec-CCCc-cHHHHHHHHHH----cCC----cEEEEeecCCCCCCcceee-ccCchhHHHHhHHHHHHHH
Q psy15564 160 PEYGPHKHYVAFR-YADP-LTEETLDQIEK----DGA----ERVVIFSQYPQDGAERVVI-FSQYPQYSCATSGSSLNAI 228 (1041)
Q Consensus 160 ~~~~~~~v~~a~r-y~~P-~I~~~l~~l~~----~g~----~~illfSahP~~~~~~iv~-gd~YP~~s~~Tt~s~~~~v 228 (1041)
.+...+.++-. |.|| +|++..+.+.+ .+. +..|+|||| |+|++++. ||||+.+|..|++ .+
T Consensus 157 --~~~i~i~~i~~~~~~p~~I~ala~~I~~~l~~~~~~~~~~~~llfSaH--glP~~~~~~GDpY~~q~~~ta~----ll 228 (362)
T 1lbq_A 157 --ERSISWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAH--SLPMDVVNTGDAYPAEVAATVY----NI 228 (362)
T ss_dssp --TCCSEEEEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEE--CCBHHHHTTTCSHHHHHHHHHH----HH
T ss_pred --CCCceEEEecCCCCCHHHHHHHHHHHHHHHHhcCcccCCCeEEEEecC--CCccccccCCCcHHHHHHHHHH----HH
Confidence 12345555555 7788 87777775542 221 126889998 99999877 9999999999986 55
Q ss_pred HHHHhhcCCCCCcceeeecCCCCChhHHHHHHHHHHHHHhhCCCCCCCceEEE-EeeecchhhhHHHHHHHH-------h
Q psy15564 229 YTHLNKKGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIIL-FSAHSLPLRALVTLFARI-------T 300 (1041)
Q Consensus 229 ~e~L~~~~~~~~l~~qsI~r~g~~pwl~pat~d~I~~~l~~~~~~g~~~v~lV-~SfHS~~~~tl~eL~~~i-------t 300 (1041)
++.++. +.++.++||| ++|+.||+.|+|.+.|++. ++ |.++++|+ ++|+|||+|||+|++.|. -
T Consensus 229 ~e~lg~-~~~~~~~fQS--r~G~~~WL~P~t~~~l~~L-~~----G~k~vvVvP~gFvsD~lETL~eid~e~~e~~~~~G 300 (362)
T 1lbq_A 229 MQKLKF-KNPYRLVWQS--QVGPKPWLGAQTAEIAEFL-GP----KVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKD 300 (362)
T ss_dssp HHHTTT-CSCEEEEEEC--CCSSSCBCSCBHHHHHHHH-GG----GCSCEEEECTTCSSCCHHHHTCCCCCCCTTCTTGG
T ss_pred HHHcCC-CCCEEEEEEC--CCCCcccCCCCHHHHHHHH-Hc----CCCeEEEECCeechhhHhhHHHHHHHHHHHHHhCC
Confidence 566653 2245789999 9999999999999999764 33 44588888 899999999999986333 2
Q ss_pred hcccccCCCCCHHHHHHHHHHH-HHHHH
Q psy15564 301 KLGWFDSEKDEFVFRNVIQDVS-NFLQV 327 (1041)
Q Consensus 301 kl~~~~~ln~~~~Fi~~l~~l~-~~lQ~ 327 (1041)
.|.++||+|++|.|+++|++++ +.+++
T Consensus 301 ~~~~~p~Ln~~p~fi~~L~~lv~~~l~~ 328 (362)
T 1lbq_A 301 KFKRCESLNGNQTFIEGMADLVKSHLQS 328 (362)
T ss_dssp GEEECCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CEEEcCCCCCCHHHHHHHHHHHHHHhcc
Confidence 3789999999999999999998 57765
No 3
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=99.97 E-value=1.1e-32 Score=308.48 Aligned_cols=263 Identities=13% Similarity=0.111 Sum_probs=195.2
Q ss_pred CCceEEEEEecCCCCCcchhHHHHhhhcCccccccCCCCCCCchhHHHHHHhcCCCCChHH----HHHHHHhhcC-----
Q psy15564 32 KPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGITRPKTAILMLNMGGPTHTDQ----VSEYLHRIMT----- 102 (1041)
Q Consensus 32 ~~k~aVlLlNlGGP~s~~~V~~FL~nlFsD~~II~~p~~~~l~~k~avly~~iGGpSpl~~----l~~fL~~~l~----- 102 (1041)
++|+||||+|||||+++++|+|||+|+|+|+.| |.+ ..++++..|..+||+||+.. +.+.|++.+.
T Consensus 3 ~~~~~vLl~n~G~P~~~~~v~~fL~~~~~~~~~---~~~--r~~~~~~~Y~~ig~gSPl~~~t~~q~~~L~~~L~~~~~~ 77 (310)
T 2h1v_A 3 RKKMGLLVMAYGTPYKEEDIERYYTHIRRGRKP---EPE--MLQDLKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDE 77 (310)
T ss_dssp CEEEEEEEEECCCCSSGGGHHHHHHHHTTTCCC---CHH--HHHHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred CCCeEEEEEeCCCCCChHHHHHHHHHHhcCCCC---ChH--HHHHHHHHHHHCCCCChhHHHHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999999999999999743 221 14789999999999999843 3333433332
Q ss_pred -CCCc-eeCCCccch-hhhhcccCChhhH--------HhhhccCCCChHHHHHHHHHHHHHHHhhhcCCCCCCceEEEEe
Q psy15564 103 -DRDM-IQLPVQGKL-GPYIARRRTPEVQ--------KKYQEIGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAF 171 (1041)
Q Consensus 103 -d~~v-i~~py~~Pl-~~~I~~~r~~~~~--------~qYs~ittgSpl~~~t~~qa~~L~~~L~~~~~~~~~~~v~~a~ 171 (1041)
+-.| +.+.||+|+ ...+...+..+++ |||+.+|+||..+++.+...+ .. ..++.++.
T Consensus 78 ~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPl~pq~s~st~g~~~~~i~~~l~~-----~~-------~~~i~~i~ 145 (310)
T 2h1v_A 78 ITFKAYIGLAHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEK-----LG-------GLTITSVE 145 (310)
T ss_dssp EEEEEEEEESSSSSBHHHHHHHHHHTTCCEEEEEESSSSCCTTTHHHHHHHHHHHHHH-----HC-------SCEEEECC
T ss_pred CCceEeehhcCCCCCHHHHHHHHHhcCCCEEEEEECccchhhhhHHHHHHHHHHHHHh-----CC-------CCeEEEeC
Confidence 1112 225799996 6777776666655 799999999999888776432 11 12455554
Q ss_pred c-CCCc-cHHHHHHHHHH----cC----CcEEEEeecCCCCCCcceee-ccCchhHHHHhHHHHHHHHHHHHhhcCCCCC
Q psy15564 172 R-YADP-LTEETLDQIEK----DG----AERVVIFSQYPQDGAERVVI-FSQYPQYSCATSGSSLNAIYTHLNKKGSPSN 240 (1041)
Q Consensus 172 r-y~~P-~I~~~l~~l~~----~g----~~~illfSahP~~~~~~iv~-gd~YP~~s~~Tt~s~~~~v~e~L~~~~~~~~ 240 (1041)
. |.|| +|+...+.+.+ .+ .+..|+||+| |+|++++. ||||+.+|..|+. .+++.++. ..+.
T Consensus 146 ~~~~~p~~i~a~a~~i~~~l~~~~~~~~~~~~llfs~H--G~P~~~~~~gDpY~~~~~~t~~----~l~e~l~~--~~~~ 217 (310)
T 2h1v_A 146 SWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAH--SLPEKIKEFGDPYPDQLHESAK----LIAEGAGV--SEYA 217 (310)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHSCHHHHTSEEEEEEEE--CCBGGGGGGTCCHHHHHHHHHH----HHHHHHTC--SCEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcccccCCCceEEEecC--CCchhhccCCCChHHHHHHHHH----HHHHHcCC--CCEE
Confidence 4 6788 77777665532 22 2356889998 88888777 9999999999985 55556653 2446
Q ss_pred cceeeecCCCCChhHHHHHHHHHHHHHhhCCCCCCCceEEE-EeeecchhhhHHHHHHHH--------hhcccccCCCCC
Q psy15564 241 ISWSLIDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIIL-FSAHSLPLRALVTLFARI--------TKLGWFDSEKDE 311 (1041)
Q Consensus 241 l~~qsI~r~g~~pwl~pat~d~I~~~l~~~~~~g~~~v~lV-~SfHS~~~~tl~eL~~~i--------tkl~~~~~ln~~ 311 (1041)
++|||- ++|+.||+.|+|.+.|++..++. |.++++|+ ++|.|+|+||++|++.+. .+|.++||+|++
T Consensus 218 ~~fqSr-g~g~~~Wl~P~~~~~l~~l~~~~---G~k~v~V~P~~F~sD~lEtl~ei~~e~~e~~~~~G~~~~~~p~ln~~ 293 (310)
T 2h1v_A 218 VGWQSE-GNTPDPWLGPDVQDLTRDLFEQK---GYQAFVYVPVGFVADHLEVLYDNDYECKVVTDDIGASYYRPEMPNAK 293 (310)
T ss_dssp EEEESC-CCCSSCBSSCBHHHHHHHHHHHH---CCSEEEEECTTCCSSCHHHHTTTTTHHHHHHHHHTCEEECCCCCTTC
T ss_pred EEEEcC-CCCCCCcCCCCHHHHHHHHHHHc---CCceEEEECCcccccceeeHHHHHHHHHHHHHHcCCeEEECCCCCCC
Confidence 899992 39999999999999997643321 33477788 789999999999885333 357899999999
Q ss_pred HHHHHHHHHHHH
Q psy15564 312 FVFRNVIQDVSN 323 (1041)
Q Consensus 312 ~~Fi~~l~~l~~ 323 (1041)
|.|+++++++++
T Consensus 294 p~~i~~l~~~v~ 305 (310)
T 2h1v_A 294 PEFIDALATVVL 305 (310)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999873
No 4
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=99.97 E-value=1.2e-31 Score=303.14 Aligned_cols=205 Identities=54% Similarity=1.020 Sum_probs=182.6
Q ss_pred chhHHHHHHhcCCCCChHHHHHHHHhhcCCCCceeCCCccchhhhhcccCChhhHHhhhccCCCChHHHHHHHHHHHHHH
Q psy15564 74 RPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPEVQKKYQEIGGGSPILKWTQLQGEKMAN 153 (1041)
Q Consensus 74 ~~k~avly~~iGGpSpl~~l~~fL~~~l~d~~vi~~py~~Pl~~~I~~~r~~~~~~qYs~ittgSpl~~~t~~qa~~L~~ 153 (1041)
++|+|++++|+|||+.+++|++||.++++|++||++|.++++..+|++.|.+++.++|+.+|+|||++.+|+.|+++|++
T Consensus 2 ~~k~gVLL~nlG~P~~~~~V~~fL~~~~~d~~Vi~~P~~~~L~~~I~~~R~~k~~~~Y~~igggSPL~~~t~~Q~~~L~~ 81 (359)
T 3hcn_A 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVK 81 (359)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHHTCTTTCCCTTHHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCHHHHHHHHHHHccCCcccccchHHHHhHHhcccchHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999998778899999999999999999999999999999999999999
Q ss_pred HhhhcCCCCCCceEEEEecCCCccHHHHHHHHHHcCCcEEEEeecCCCCCCcceeeccCchhHHHHhHHHHHHHHHHHHh
Q psy15564 154 KLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLN 233 (1041)
Q Consensus 154 ~L~~~~~~~~~~~v~~a~ry~~P~I~~~l~~l~~~g~~~illfSahP~~~~~~iv~gd~YP~~s~~Tt~s~~~~v~e~L~ 233 (1041)
.|++..++...++|++||||++|+|++++++++++|++++| ++|+||||+.+||+++++.+.+.+.
T Consensus 82 ~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~iv--------------vlPlyPqyS~~Ttgs~~~~~~~~~~ 147 (359)
T 3hcn_A 82 LLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAI--------------AFTQYPQYSCSTTGSSLNAIYRYYN 147 (359)
T ss_dssp HHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEE--------------EEESCSSCCTTTHHHHHHHHHHHHH
T ss_pred HHhhhcccccCceEEEEEeeCCCCHHHHHHHHHhcCCCeEE--------------EEECCccccccchhhHHHHHHHHHH
Confidence 88754332235799999999999999999999999998875 3689999999999999999988887
Q ss_pred hcCCCCCcceeeecCCCCChhHHHHHHHHHHHHHhhCCCCCCCceEEEEeeecchhhhH
Q psy15564 234 KKGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLRAL 292 (1041)
Q Consensus 234 ~~~~~~~l~~qsI~r~g~~pwl~pat~d~I~~~l~~~~~~g~~~v~lV~SfHS~~~~tl 292 (1041)
+..+.+.+.+..|++|+++|.|+.++++.|++++++++.+.+++..|+|||||+|.+.+
T Consensus 148 ~~~~~~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaHgiP~~~~ 206 (359)
T 3hcn_A 148 QVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVV 206 (359)
T ss_dssp HTTCCCSSEEEEECCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEECCBHHHH
T ss_pred HhccCCCCceEEeCCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcCCChHhhc
Confidence 65444457789999999999999999999999998876543446789999999999887
No 5
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=99.96 E-value=2.5e-29 Score=285.46 Aligned_cols=205 Identities=46% Similarity=0.886 Sum_probs=179.2
Q ss_pred chhHHHHHHhcCCCCChHHHHHHHHhhcCCCCceeCCC-c-cchhhhhcccCChhhHHhhhccCCCChHHHHHHHHHHHH
Q psy15564 74 RPKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPV-Q-GKLGPYIARRRTPEVQKKYQEIGGGSPILKWTQLQGEKM 151 (1041)
Q Consensus 74 ~~k~avly~~iGGpSpl~~l~~fL~~~l~d~~vi~~py-~-~Pl~~~I~~~r~~~~~~qYs~ittgSpl~~~t~~qa~~L 151 (1041)
++|+|++++|+|||+.++++++||.++++|++||++|. | ++++.+|+..|.+++.++|+.+|+|||++.+|+.|+++|
T Consensus 5 ~~k~gvLL~nlG~P~~~~~V~~fL~~~~~d~~vi~~p~~~~~~l~~~I~~~R~~k~~~~Y~~ig~gSPL~~~t~~q~~~L 84 (362)
T 1lbq_A 5 RSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQATEV 84 (362)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSSSHHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHHHHH
T ss_pred CCceEEEEEECCCCCCHHHHHHHHHHhccCCccccCCHHHHHHHhhhcCccchHHHHHHHHHcCCCCccHHHHHHHHHHH
Confidence 46789999999999999999999999999999999973 4 446899999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCceEEEEecCCCccHHHHHHHHHHcCCcEEEEeecCCCCCCcceeeccCchhHHHHhHHHHHHHHHHH
Q psy15564 152 ANKLNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTH 231 (1041)
Q Consensus 152 ~~~L~~~~~~~~~~~v~~a~ry~~P~I~~~l~~l~~~g~~~illfSahP~~~~~~iv~gd~YP~~s~~Tt~s~~~~v~e~ 231 (1041)
++.+++..++..+++|++||||++|+|++++++++++|+++|+ ++|+||||+.+|++++.+.+.+.
T Consensus 85 ~~~L~~~~~~~~~~~V~~amry~~P~i~d~l~~l~~~G~~~iv--------------vlPlyPqyS~~ttgs~~~~i~~~ 150 (362)
T 1lbq_A 85 CKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAV--------------AFSQYPHFSYSTTGSSINELWRQ 150 (362)
T ss_dssp HHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEE--------------EEESCSSCCTTTHHHHHHHHHHH
T ss_pred HHHHHhhcccCCCceEEeecccCCCCHHHHHHHHHHcCCCeEE--------------EEecchhccccchhHHHHHHHHH
Confidence 9998654322235789999999999999999999999998864 46999999999999999998888
Q ss_pred HhhcCCCCCcceeeecCCCCChhHHHHHHHHHHHHHhhCCCCCCCceEEEEeeecchhhhH
Q psy15564 232 LNKKGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLRAL 292 (1041)
Q Consensus 232 L~~~~~~~~l~~qsI~r~g~~pwl~pat~d~I~~~l~~~~~~g~~~v~lV~SfHS~~~~tl 292 (1041)
+++.++.+.+.+..|++||.+|.|+.++++.|+++++..+...++++.|||||||+|.+.+
T Consensus 151 l~~~~~~~~i~i~~i~~~~~~p~~I~ala~~I~~~l~~~~~~~~~~~~llfSaHglP~~~~ 211 (362)
T 1lbq_A 151 IKALDSERSISWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVV 211 (362)
T ss_dssp HHHHCTTCCSEEEEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHH
T ss_pred HHhcccCCCceEEEecCCCCCHHHHHHHHHHHHHHHHhcCcccCCCeEEEEecCCCccccc
Confidence 8765555567888999999999999999999999998775432335789999999999887
No 6
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=99.90 E-value=3.6e-24 Score=239.56 Aligned_cols=187 Identities=22% Similarity=0.455 Sum_probs=159.2
Q ss_pred hhHHHHHHhcCCCCChHHHHHHHHhhcCCCCceeCCCccchhhhhcccCChhhHHhhhccCCCChHHHHHHHHHHHHHHH
Q psy15564 75 PKTAILMLNMGGPTHTDQVSEYLHRIMTDRDMIQLPVQGKLGPYIARRRTPEVQKKYQEIGGGSPILKWTQLQGEKMANK 154 (1041)
Q Consensus 75 ~k~avly~~iGGpSpl~~l~~fL~~~l~d~~vi~~py~~Pl~~~I~~~r~~~~~~qYs~ittgSpl~~~t~~qa~~L~~~ 154 (1041)
+|+|++++|+|||+.++++++||.+++.|+. |..+|.+++.++|+.+|+|||++.+|+.|+++|++.
T Consensus 4 ~~~~vLl~n~G~P~~~~~v~~fL~~~~~~~~-------------~~~~r~~~~~~~Y~~ig~gSPl~~~t~~q~~~L~~~ 70 (310)
T 2h1v_A 4 KKMGLLVMAYGTPYKEEDIERYYTHIRRGRK-------------PEPEMLQDLKDRYEAIGGISPLAQITEQQAHNLEQH 70 (310)
T ss_dssp EEEEEEEEECCCCSSGGGHHHHHHHHTTTCC-------------CCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhcCCC-------------CChHHHHHHHHHHHHCCCCChhHHHHHHHHHHHHHH
Confidence 5789999999999999999999999998752 234557889999999999999999999999999999
Q ss_pred hhhcCCCCCCceEEEEecCCCccHHHHHHHHHHcCCcEEEEeecCCCCCCcceeeccCchhHHHHhHHHHHHHHHHHHhh
Q psy15564 155 LNSVCPEYGPHKHYVAFRYADPLTEETLDQIEKDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNK 234 (1041)
Q Consensus 155 L~~~~~~~~~~~v~~a~ry~~P~I~~~l~~l~~~g~~~illfSahP~~~~~~iv~gd~YP~~s~~Tt~s~~~~v~e~L~~ 234 (1041)
+++..++ .+++|+++|+|++|+|++++++++++|+++|+ ++|+||||+.+|++++.+.+.+.+++
T Consensus 71 L~~~~~~-~~~~V~~amry~~P~i~~~l~~l~~~G~~~iv--------------vlPl~pq~s~st~g~~~~~i~~~l~~ 135 (310)
T 2h1v_A 71 LNEIQDE-ITFKAYIGLAHIEPFIEDAVAEMHKDGITEAV--------------SIVLAPHFSTFSVQSYNKRAKEEAEK 135 (310)
T ss_dssp HHHHCSS-EEEEEEEEESSSSSBHHHHHHHHHHTTCCEEE--------------EEESSSSCCTTTHHHHHHHHHHHHHH
T ss_pred HHhcCCC-CCceEeehhcCCCCCHHHHHHHHHhcCCCEEE--------------EEECccchhhhhHHHHHHHHHHHHHh
Confidence 8653211 15789999999999999999999999998764 46999999999999999989888876
Q ss_pred cCCCCCcceeeecCCCCChhHHHHHHHHHHHHHhhCCCCCCCceEEEEeeecchhhhH
Q psy15564 235 KGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPLRAL 292 (1041)
Q Consensus 235 ~~~~~~l~~qsI~r~g~~pwl~pat~d~I~~~l~~~~~~g~~~v~lV~SfHS~~~~tl 292 (1041)
.+ .+.+..|++||.+|.|+.++++.|+++++..+...+++..|||||||+|...+
T Consensus 136 ~~---~~~i~~i~~~~~~p~~i~a~a~~i~~~l~~~~~~~~~~~~llfs~HG~P~~~~ 190 (310)
T 2h1v_A 136 LG---GLTITSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIK 190 (310)
T ss_dssp HC---SCEEEECCCCTTCHHHHHHHHHHHHHHHHHSCHHHHTSEEEEEEEECCBGGGG
T ss_pred CC---CCeEEEeCCCCCCHHHHHHHHHHHHHHHHhcccccCCCceEEEecCCCchhhc
Confidence 54 36789999999999999999999999987765311235689999999998765
No 7
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=98.67 E-value=5e-07 Score=115.09 Aligned_cols=168 Identities=10% Similarity=0.088 Sum_probs=131.3
Q ss_pred HHHHHHHHHHhHcCCCcccccccccCCChHhHHHHHHHHHhhccchhhhhcchhhHHHHHHHHHHHHHhhHHHHhcCCHH
Q psy15564 814 ISICFSMLKAALCGGYVNFGVFRLYGDEALDNALKTFVKLLLSINQSDLLDYPKLSQTYYVLLECLAQDHMSFLASLEPT 893 (1041)
Q Consensus 814 I~~~l~iL~~~Lsg~yvnFgvf~lYgD~~l~~al~~~~~l~l~IP~~dLl~yPKL~~~yf~lle~l~e~~~~~l~~L~~~ 893 (1041)
+..++.+++.++. .||....++ +.+...+..++...+.+...++.+||++.++||.|+..+.+.+|..+.+ ++
T Consensus 740 ~~~~l~l~~~li~----~f~~~~~~~-~~~~~~l~~~~~~~l~~~~~~~~~~pd~~~~~f~ll~~~~~~~~~~~~~--~~ 812 (963)
T 2x19_B 740 QASALDLTRQLVH----IFAHEPAHF-PPIEALFLLVTSVTLTLFQQGPRDHPDIVDSFMQLLAQALKRKPDLFLC--ER 812 (963)
T ss_dssp CHHHHHHHHHHHH----HHTTCTTTC-HHHHHHHHHHHHHHHHHHHHCTTTCHHHHHHHHHHHHHHHHHCGGGGGC--TT
T ss_pred ccHHHHHHHHHHH----HhCCCcchH-HHHHHHHHHHHHHHHHHHhhCcccCchHHHHHHHHHHHHHHhCcHHHcC--Cc
Confidence 4566777777765 244433333 3455666666666666666778889999999999999999999988754 44
Q ss_pred H-HHHHHHHHHHhcccCchhHhhhHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCchhhHHHHHhhhChHHHHHHHHHHH
Q psy15564 894 V-FLYILSSISEGLTALDTMVCTGCCATLDHIVTYLFKQITNKGKKKSGRPGASPTGTDMFLQVLEVRPEILQQILSTVL 972 (1041)
Q Consensus 894 ~-f~~ll~sl~~GL~s~d~~i~~~c~~~Ld~lat~~~k~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~~~ll~~~L~~l~ 972 (1041)
. |..++.++..|+++.|.+++..||.++..++++.. . .+.+.+++.+ .+..++..+|
T Consensus 813 ~~~~~i~~~~~~~l~~~~~~~~~~~l~~l~~l~~~~~-------~------------~~~~~~~~~~---~~~~l~~~l~ 870 (963)
T 2x19_B 813 LDVKAVFQCAVLALKFPEAPTVKASCGFFTELLPRCG-------E------------VESVGKVVQE---DGRMLLIAVL 870 (963)
T ss_dssp SCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHGGGTT-------S------------SCHHHHHTTT---SHHHHHHHHH
T ss_pred ccHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcCC-------C------------hHHHHHHHHH---HHHHHHHHHH
Confidence 5 99999999999999999999999999999986432 0 0124455553 3788999999
Q ss_pred HHHhhccCCchh-cchhhhHHHhhcCHHHHHHHHHHHHh
Q psy15564 973 NIIMFEDCRNQW-SMSRPLLGLILLNEEYFNQLRENIVR 1010 (1041)
Q Consensus 973 n~ilfed~~~~w-s~Sr~Ll~LIl~~~~~f~~l~~~li~ 1010 (1041)
+.+..+.++..| ..+..|+.|+..+++.+.++..++++
T Consensus 871 ~~l~~~~~~~~~~~~~~il~~l~~~~~~~~~~~l~~~l~ 909 (963)
T 2x19_B 871 EAIGGQASRSLMDCFADILFALNKHCFSLLSMWIKEALQ 909 (963)
T ss_dssp HHHTTTSCGGGHHHHHHHHHHHHHHSHHHHHHHHHHHTC
T ss_pred HHhcccCChhHHHHHHHHHHHHHHHChHHHHHHHHHHhc
Confidence 999999999999 77889999999999999999888885
No 8
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=97.92 E-value=3.1e-05 Score=84.42 Aligned_cols=103 Identities=16% Similarity=0.107 Sum_probs=72.9
Q ss_pred CceEEEEecC------------CCccHHHHHHHHHHcCCcEEEEeecCCCCCCcceeeccCchhHHHHhHHHHHHHHHHH
Q psy15564 164 PHKHYVAFRY------------ADPLTEETLDQIEKDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTH 231 (1041)
Q Consensus 164 ~~~v~~a~ry------------~~P~I~~~l~~l~~~g~~~illfSahP~~~~~~iv~gd~YP~~s~~Tt~s~~~~v~e~ 231 (1041)
+++++.+|.+ .+|+++++++++.+.|+++|+++|.| |. +|...+.+.+.
T Consensus 41 ~~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~~G~~~ivV~Pl~--------------l~-----~G~~~~di~~~ 101 (269)
T 2xvy_A 41 DIPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAEEGFTHVAVQSLH--------------TI-----PGEEFHGLLET 101 (269)
T ss_dssp TSCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCCEEEEEECC--------------SS-----SSHHHHHHHHH
T ss_pred CCeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHHCCCCEEEEEece--------------ee-----ccHhHHHHHHH
Confidence 4689999886 78999999999999999988766554 42 11122334344
Q ss_pred ---HhhcCCCCCcceeeecCCCCChhHHHHHHHHHHHHHhhCCCCCCCceEEEEeeecchh
Q psy15564 232 ---LNKKGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILFSAHSLPL 289 (1041)
Q Consensus 232 ---L~~~~~~~~l~~qsI~r~g~~pwl~pat~d~I~~~l~~~~~~g~~~v~lV~SfHS~~~ 289 (1041)
+.+.... ...+..++.||.+|.++.++++.|++.+..... ++..||+++||.|.
T Consensus 102 ~~~l~~~~~~-~~~i~~~~pl~~~p~~i~~la~~i~~~~~~~~~---~~~~lll~~HGs~~ 158 (269)
T 2xvy_A 102 AHAFQGLPKG-LTRVSVGLPLIGTTADAEAVAEALVASLPADRK---PGEPVVFMGHGTPH 158 (269)
T ss_dssp HHHHTTCTTS-CSEEEEECCSSCSHHHHHHHHHHHHHHSCTTCC---TTCCEEEEECCCSS
T ss_pred HHHHHHhhcc-CCeEEEeCCCCCCHHHHHHHHHHHHHhchhhcc---CCceEEEEECCCCh
Confidence 4432211 146777889999999999999999887643111 24478999999985
No 9
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=97.55 E-value=0.00015 Score=78.87 Aligned_cols=231 Identities=10% Similarity=0.016 Sum_probs=122.2
Q ss_pred CCCCceEEEEEecCCCC--C---cchhHHHHhhhcCccccccCCCCCCCchhHHHHHH--hcCCCCChHHHHHHHHhhcC
Q psy15564 30 SSKPKTAILMLNMGGPT--H---TDQVSEYLHRIMTDRDMIQLPVQGITRPKTAILML--NMGGPTHTDQVSEYLHRIMT 102 (1041)
Q Consensus 30 ~~~~k~aVlLlNlGGP~--s---~~~V~~FL~nlFsD~~II~~p~~~~l~~k~avly~--~iGGpSpl~~l~~fL~~~l~ 102 (1041)
+++.|+||||+--|+-+ . .+++..-|...|-|..|- ..++.+.+...+. ++|.|+..+.+.+...+ +
T Consensus 5 ~~~~~~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~----~af~~~~i~~~l~~~~~~~P~i~~al~~l~~~--G 78 (269)
T 2xvy_A 5 PKAQKTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVR----WAYTAKMIRAKLRAEGIAAPSPAEALAGMAEE--G 78 (269)
T ss_dssp ---CCEEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEE----EEESCHHHHHHHHHTTCCCCCHHHHHHHHHHT--T
T ss_pred CCCCCceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEE----eehhhHHHHHHHHHcCCCCCCHHHHHHHHHHC--C
Confidence 34556899999999966 2 233444455556443221 1233333333333 35666666666654432 2
Q ss_pred CCCceeCCCccchhhhhcccCChhhHHhhhccCCCChHHHHHHHHHHHHHHHhhhcCCCCCCceEEEEec-CCCc-cHHH
Q psy15564 103 DRDMIQLPVQGKLGPYIARRRTPEVQKKYQEIGGGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAFR-YADP-LTEE 180 (1041)
Q Consensus 103 d~~vi~~py~~Pl~~~I~~~r~~~~~~qYs~ittgSpl~~~t~~qa~~L~~~L~~~~~~~~~~~v~~a~r-y~~P-~I~~ 180 (1041)
-++++.+|+.. ++|+...++.+... .+...- ..-.++.++.. +.+| +++.
T Consensus 79 ~~~ivV~Pl~l---------------------~~G~~~~di~~~~~-----~l~~~~--~~~~~i~~~~pl~~~p~~i~~ 130 (269)
T 2xvy_A 79 FTHVAVQSLHT---------------------IPGEEFHGLLETAH-----AFQGLP--KGLTRVSVGLPLIGTTADAEA 130 (269)
T ss_dssp CCEEEEEECCS---------------------SSSHHHHHHHHHHH-----HHTTCT--TSCSEEEEECCSSCSHHHHHH
T ss_pred CCEEEEEecee---------------------eccHhHHHHHHHHH-----HHHHhh--ccCCeEEEeCCCCCCHHHHHH
Confidence 24455566521 24554444443211 121100 01135565544 6677 7777
Q ss_pred HHHHHHHcC-----CcEEEEeecCCCCCCcceeeccCchhHHHHhHHHHHHHHHHHHhhcCCCCCcceeeecCCCCChhH
Q psy15564 181 TLDQIEKDG-----AERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRWSTHPLL 255 (1041)
Q Consensus 181 ~l~~l~~~g-----~~~illfSahP~~~~~~iv~gd~YP~~s~~Tt~s~~~~v~e~L~~~~~~~~l~~qsI~r~g~~pwl 255 (1041)
+++.+.+.. .+..|+|++| |+|++ ++.+.. .+ .+.+.+.+ ..+| +|..+|
T Consensus 131 la~~i~~~~~~~~~~~~~lll~~H--Gs~~~---~~~~~~---~~--------a~~l~~~~---~~~~-----~g~~e~- 185 (269)
T 2xvy_A 131 VAEALVASLPADRKPGEPVVFMGH--GTPHP---ADICYP---GL--------QYYLWRLD---PDLL-----VGTVEG- 185 (269)
T ss_dssp HHHHHHHHSCTTCCTTCCEEEEEC--CCSSG---GGGHHH---HH--------HHHHHTTC---TTEE-----EEESSS-
T ss_pred HHHHHHHhchhhccCCceEEEEEC--CCChh---hccHHH---HH--------HHHHHhcC---CCEE-----EEEcCC-
Confidence 777775431 2245789998 77752 443211 11 12333222 2344 445566
Q ss_pred HHHHHHHHHHHHhhCCCCCCCceEEEE--eeecchhh--hHHHH----HHHH-----hhcccccCCCCCHHHHHHHHHHH
Q psy15564 256 CKVFAERIQEELKQFPVEVQKDVIILF--SAHSLPLR--ALVTL----FARI-----TKLGWFDSEKDEFVFRNVIQDVS 322 (1041)
Q Consensus 256 ~pat~d~I~~~l~~~~~~g~~~v~lV~--SfHS~~~~--tl~eL----~~~i-----tkl~~~~~ln~~~~Fi~~l~~l~ 322 (1041)
.|++.+.|++..++ |.++++|++ .|.|+|.+ ...++ .... +.+.+.|++|++|.|++.+.+.+
T Consensus 186 ~P~~~~~l~~l~~~----G~~~v~v~P~~l~~G~h~~~di~~~~~~~~~~~~~~~g~~~~~~~~~Lg~~p~~~~~l~~~~ 261 (269)
T 2xvy_A 186 SPSFDNVMAELDVR----KAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEAKPVLHGTAESDAVAAIWLRHL 261 (269)
T ss_dssp SSCHHHHHHHHHHH----TCSEEEEEEESSSCCHHHHTTTTCSSTTSHHHHHHHTTCEEEECCCCGGGCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHC----CCCEEEEECCccccccchhhhcCCCchhHHHHHHHHcCcEEEEecCCCCCCHHHHHHHHHHH
Confidence 68888888664333 334777773 35789988 33232 1222 22337899999999999999876
Q ss_pred H
Q psy15564 323 N 323 (1041)
Q Consensus 323 ~ 323 (1041)
+
T Consensus 262 ~ 262 (269)
T 2xvy_A 262 D 262 (269)
T ss_dssp H
T ss_pred H
Confidence 3
No 10
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=96.72 E-value=0.017 Score=62.55 Aligned_cols=157 Identities=13% Similarity=0.102 Sum_probs=91.6
Q ss_pred CCChHHHHHHHHHHHHHHHhhhcCCCCCCceEEEEe-----------c--CCCccHHHHHHHHHHcCCcEEEEeecCCCC
Q psy15564 136 GGSPILKWTQLQGEKMANKLNSVCPEYGPHKHYVAF-----------R--YADPLTEETLDQIEKDGAERVVIFSQYPQD 202 (1041)
Q Consensus 136 tgSpl~~~t~~qa~~L~~~L~~~~~~~~~~~v~~a~-----------r--y~~P~I~~~l~~l~~~g~~~illfSahP~~ 202 (1041)
=||...++.+...+.+.+.+++.. ++++++.+| + ...|.++++++++.+.|+++|++.|.|+
T Consensus 10 hGSr~~~~~~~~~~~~~~~v~~~~---p~~~V~~af~s~~i~~~l~~~~g~~~psi~~aL~~l~~~G~~~vvV~Pl~l-- 84 (264)
T 2xwp_A 10 FGTSYHDTCEKNIVACERDLAASC---PDRDLFRAFTSGMIIRKLRQRDGIDIDTPLQALQKLAAQGYQDVAIQSLHI-- 84 (264)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHC---TTSEEEEEESCHHHHHHHHHHHCCCCCCHHHHHHHHHHHTCCEEEEEECCS--
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHC---CCCeEEeehhhHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCCEEEEEeCcc--
Confidence 466666655522333444554433 356888887 2 2459999999999999999998887772
Q ss_pred CCcceeeccCchhHHHHhHHHHHHHHHHHHhhcCCCCCcceeeecCCCCChhHHHHHHHHHHHHHhhCCCCCCCceEEEE
Q psy15564 203 GAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIILF 282 (1041)
Q Consensus 203 ~~~~iv~gd~YP~~s~~Tt~s~~~~v~e~L~~~~~~~~l~~qsI~r~g~~pwl~pat~d~I~~~l~~~~~~g~~~v~lV~ 282 (1041)
++- .....+...+ +.+... .+ .+...+.+|.++.+++.+++.|.+.+... .++..||+
T Consensus 85 -------~~G------~~~~di~~~v-~~~~~~-~~---~i~~~~pl~~~~~~~~~l~~~l~~~~~~~----~~~~~lvl 142 (264)
T 2xwp_A 85 -------ING------DEYEKIVREV-QLLRPL-FT---RLTLGVPLLSSHNDYVQLMQALRQQMPSL----RQTEKVVF 142 (264)
T ss_dssp -------SSS------HHHHHHHHHH-HHHGGG-CS---EEEEECCSSCSHHHHHHHHHHHHTTSCCC----CTTEEEEE
T ss_pred -------cCc------HHHHHHHHHH-HHHHhh-CC---ceEEecCCCCCHHHHHHHHHHHHHhcccc----CCCCeEEE
Confidence 111 1111121222 222221 11 33446799999999999888886544321 13558999
Q ss_pred eeecchhhhH---HHHHHHHhhc------ccccCCCCCHHHHHHHHHHH
Q psy15564 283 SAHSLPLRAL---VTLFARITKL------GWFDSEKDEFVFRNVIQDVS 322 (1041)
Q Consensus 283 SfHS~~~~tl---~eL~~~itkl------~~~~~ln~~~~Fi~~l~~l~ 322 (1041)
++||.+...- .++...+.+. |+.+ ..|.+.++++.+.
T Consensus 143 ~gHGs~~~~~~~~~~~a~~l~~~~~~v~~g~~e---~~P~~~~~l~~l~ 188 (264)
T 2xwp_A 143 MGHGASHHAFAAYACLDHMMTAQRFPARVGAVE---SYPEVDILIDSLR 188 (264)
T ss_dssp EECCCSSGGGHHHHHHHHHHHHTTCSEEEEESS---SSSCHHHHHHHHH
T ss_pred EECCCCchhhHHHHHHHHHHHhhCCCEEEEEeC---CCCCHHHHHHHHH
Confidence 9999876422 2222233222 3333 2677777776654
No 11
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=96.65 E-value=0.1 Score=67.23 Aligned_cols=106 Identities=14% Similarity=0.265 Sum_probs=84.8
Q ss_pred hhhhHHHHHHHHHHhHcCCCcccccccccCCChHhHHHHHHHHHhhccchhhhhcchhhHHHHHHHHHHHHHhhHHHHhc
Q psy15564 810 KLKGISICFSMLKAALCGGYVNFGVFRLYGDEALDNALKTFVKLLLSINQSDLLDYPKLSQTYYVLLECLAQDHMSFLAS 889 (1041)
Q Consensus 810 k~K~I~~~l~iL~~~Lsg~yvnFgvf~lYgD~~l~~al~~~~~l~l~IP~~dLl~yPKL~~~yf~lle~l~e~~~~~l~~ 889 (1041)
+--.+.-++.++-+-+.+... +.+...+..++.-.+-+=..|+-+||.....||.|+..+.+..+..+.+
T Consensus 798 r~~evL~l~s~iv~k~~~~~~----------~~~~~il~~vf~~Tl~mi~~~f~~~Pe~r~~ff~ll~~~~~~~f~~l~~ 867 (1073)
T 3gjx_A 798 REPEVLSTMAIIVNKLGGHIT----------AEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLA 867 (1073)
T ss_dssp CCTHHHHHHHHHHHHHGGGTG----------GGHHHHHHHHHHHHHHHHSSCSSSCHHHHHHHHHHHHHHHHHCGGGTTT
T ss_pred ccHHHHHHHHHHHHHHHhhcc----------hhHHHHHHHHHHHHHHHHhCCcccCcHHHHHHHHHHHHHHHHHhHHHHc
Confidence 445566666666666555332 3455666666655555556799999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcccCchhHhhhHHHHHHHHH
Q psy15564 890 LEPTVFLYILSSISEGLTALDTMVCTGCCATLDHIV 925 (1041)
Q Consensus 890 L~~~~f~~ll~sl~~GL~s~d~~i~~~c~~~Ld~la 925 (1041)
+|++.|..++.|+.-|++|-..+|+..++..+-.+.
T Consensus 868 l~~~~~~~~i~~i~wa~kh~~r~i~~~~l~~~~~ll 903 (1073)
T 3gjx_A 868 IPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLL 903 (1073)
T ss_dssp SCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHH
Confidence 999999999999999999999999998888877666
No 12
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=96.56 E-value=0.26 Score=63.38 Aligned_cols=86 Identities=16% Similarity=0.252 Sum_probs=71.9
Q ss_pred hHHHHHHHHHhhccchhhhhcchhhHHHHHHHHHHHHHhhHHHHhcCCHHHHHHHHHHHHHhcccCchhHhhhHHHHHHH
Q psy15564 844 DNALKTFVKLLLSINQSDLLDYPKLSQTYYVLLECLAQDHMSFLASLEPTVFLYILSSISEGLTALDTMVCTGCCATLDH 923 (1041)
Q Consensus 844 ~~al~~~~~l~l~IP~~dLl~yPKL~~~yf~lle~l~e~~~~~l~~L~~~~f~~ll~sl~~GL~s~d~~i~~~c~~~Ld~ 923 (1041)
...+..++.-.+-+=..|+-+||.....||.|+..+.+..+..+.++|++.|..++.|+.-|+++-..+|+..++.++-.
T Consensus 796 ~~il~~vf~~Tl~mi~~~~~~~Pe~r~~ff~ll~~~~~~~f~~~~~~~~~~~~~~~~~~~~a~~h~~r~~~~~~l~~~~~ 875 (1023)
T 4hat_C 796 ILILQSVFECTLDMINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALD 875 (1023)
T ss_dssp HHHHHHHHHHHHHHHSSCSSSSHHHHHHHHHHHHHHHHHCTHHHHTSCHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccccChHHHHHHHHHHHHHHHHChHHHHcCCHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Confidence 34444444444433357899999999999999999999999999999999999999999999999999999999988877
Q ss_pred HHHHHH
Q psy15564 924 IVTYLF 929 (1041)
Q Consensus 924 lat~~~ 929 (1041)
+..-+.
T Consensus 876 ll~~~~ 881 (1023)
T 4hat_C 876 LVKNIE 881 (1023)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 775443
No 13
>1w9c_A CRM1 protein, exportin 1; nuclear protein, nuclear export complex; 2.3A {Homo sapiens} SCOP: a.118.1.19
Probab=96.38 E-value=0.086 Score=58.44 Aligned_cols=87 Identities=16% Similarity=0.295 Sum_probs=76.0
Q ss_pred hHhHHHHHHHHHhhccchhhhhcchhhHHHHHHHHHHHHHhhHHHHhcCCHHHHHHHHHHHHHhcccCchhHhhhHHHHH
Q psy15564 842 ALDNALKTFVKLLLSINQSDLLDYPKLSQTYYVLLECLAQDHMSFLASLEPTVFLYILSSISEGLTALDTMVCTGCCATL 921 (1041)
Q Consensus 842 ~l~~al~~~~~l~l~IP~~dLl~yPKL~~~yf~lle~l~e~~~~~l~~L~~~~f~~ll~sl~~GL~s~d~~i~~~c~~~L 921 (1041)
.+...+...+.-.+.|=..|+-+||.....||+|++.+.+.+...+.++|++.|..++.||.-|.+|-+.+|+..++.++
T Consensus 112 ~vp~Il~~VFe~TL~MI~~df~eyPehR~~Ff~LL~ai~~~cF~al~~lp~~~fklvidsiiWa~kH~~r~V~e~gL~il 191 (321)
T 1w9c_A 112 EIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQIL 191 (321)
T ss_dssp GHHHHHHHHHHHHHHHHSSTTTCSHHHHHHHHHHHHHHHHHCTTHHHHSCHHHHHHHHHHHHHHTTCSSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcccccChHHHHHHHHHHHHHHHHhHHHHHcCCHHHHHHHHHHHHHHcCCCCchHHHHHHHHH
Confidence 34556666666666666789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q psy15564 922 DHIVTYL 928 (1041)
Q Consensus 922 d~lat~~ 928 (1041)
..+..-+
T Consensus 192 ~~ll~n~ 198 (321)
T 1w9c_A 192 FTLLQNV 198 (321)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877444
No 14
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=94.73 E-value=0.64 Score=59.01 Aligned_cols=127 Identities=13% Similarity=0.133 Sum_probs=96.1
Q ss_pred hhhhcchhhHHHHHHHHHHHHHhhHHHHhcCCHHH-HHHHHHHHHHhcccCchhHhhhHHHHHHHHHHHHHHhhhccCCC
Q psy15564 860 SDLLDYPKLSQTYYVLLECLAQDHMSFLASLEPTV-FLYILSSISEGLTALDTMVCTGCCATLDHIVTYLFKQITNKGKK 938 (1041)
Q Consensus 860 ~dLl~yPKL~~~yf~lle~l~e~~~~~l~~L~~~~-f~~ll~sl~~GL~s~d~~i~~~c~~~Ld~lat~~~k~~~~~~~~ 938 (1041)
++.-+.|.+.+.||.|+.-+...+|..+.. ++. +..++.+...+|+.-+......||.++..+++. + +
T Consensus 793 ~~~~~~pd~~~~~f~ll~~~l~~~p~~~~~--s~~~l~~i~~~~~~~l~~~~~~~~~s~~~fl~~~i~~--~---~---- 861 (971)
T 2x1g_F 793 QNFSNISDTMETFFGCLTQIIKKIPQVLED--KTLAYDRLVFYAQRGMTLPESGAIRNSIQFLTHFVMQ--S---R---- 861 (971)
T ss_dssp THHHHTHHHHHHHHHHHHHHHHSSGGGGGC--TTSCHHHHHHHHHHHHTSSCSSHHHHHHHHHHHHHHH--H---T----
T ss_pred cCCccCchHHHHHHHHHHHHHHhCcHHHcC--CcccHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhc--C---C----
Confidence 467789999999999999999999987754 355 788999999999998988999999988887754 1 0
Q ss_pred CCCCCCCCCchhhHHHHHhhhChHHHHHHHHHHHHHHhhccCCchh-cchhhhHHHhhcCHHHHHHHHHHHHh
Q psy15564 939 KSGRPGASPTGTDMFLQVLEVRPEILQQILSTVLNIIMFEDCRNQW-SMSRPLLGLILLNEEYFNQLRENIVR 1010 (1041)
Q Consensus 939 ~~~~~g~~~~~~~~l~~~l~~~~~ll~~~L~~l~n~ilfed~~~~w-s~Sr~Ll~LIl~~~~~f~~l~~~li~ 1010 (1041)
..+.+.+++. ...+.++..++..+...-.+... .++..|..|+..+++.+.++..+.++
T Consensus 862 ----------~~~~~~~~~~---~~g~~l~~~l~~~~~~~~~~s~~~~~a~~l~~l~~~~~~~~~~~l~~~l~ 921 (971)
T 2x1g_F 862 ----------NHAHVTEVVL---ATGEQTLYTAMMCVGYLTPRSQVDKFADILLAMNRKYAAEMAVWMKSLMS 921 (971)
T ss_dssp ----------TCHHHHHHHH---HHHHHHHHHHHHHHHTTSCGGGGGGGHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----------chHHHHHHHH---HhHHHHHHHHHHHhcccCChhHHHHHHHHHHHHHHHCcHHHHHHHHHHhc
Confidence 0122333333 34566667777666555555555 88889999999999999998777775
No 15
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=93.38 E-value=0.073 Score=62.35 Aligned_cols=140 Identities=15% Similarity=0.126 Sum_probs=82.8
Q ss_pred CCCChHHHHHHHHHHHHHHHhhhcCC--CCCCceEEEEecCCCccHHHHHHHHHHcCCcEEEEeecCCCCCCcceeeccC
Q psy15564 135 GGGSPILKWTQLQGEKMANKLNSVCP--EYGPHKHYVAFRYADPLTEETLDQIEKDGAERVVIFSQYPQDGAERVVIFSQ 212 (1041)
Q Consensus 135 ttgSpl~~~t~~qa~~L~~~L~~~~~--~~~~~~v~~a~ry~~P~I~~~l~~l~~~g~~~illfSahP~~~~~~iv~gd~ 212 (1041)
+-|||.+..++.+.+++++.+++..+ .-...++++++..++|+++++++++ |+++|+++ |+
T Consensus 10 gHGSp~~~~a~~~i~~La~~l~~~~~~~~L~~~~V~~Afle~~PsI~eaL~~L---G~~rVvVv--------------PL 72 (474)
T 2jh3_A 10 GHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTV---AYSDVTVV--------------PV 72 (474)
T ss_dssp ECCCSSCTHHHHHHHHHHHHHHHHHHTTCCSCSEEEEEESSSSSBTTTGGGGC---CBSEEEEE--------------EC
T ss_pred eCCCCCChhHHHHHHHHHHHHHHhCCccccCCCeEEEEEcCCCCCHHHHHHHc---CcCeEEEE--------------EE
Confidence 45777544455555556666543211 0013578888777999999999998 87777654 55
Q ss_pred chhHHHHhHHHHHHHHHHHHhhcCC-----------CCCcceeeecCCCCChhHHHHHHHHHHHHHhhCCCCCCCceEEE
Q psy15564 213 YPQYSCATSGSSLNAIYTHLNKKGS-----------PSNISWSLIDRWSTHPLLCKVFAERIQEELKQFPVEVQKDVIIL 281 (1041)
Q Consensus 213 YP~~s~~Tt~s~~~~v~e~L~~~~~-----------~~~l~~qsI~r~g~~pwl~pat~d~I~~~l~~~~~~g~~~v~lV 281 (1041)
|+.....+...+.+ .+..... .+.+.+..++.+|.+|.++..+.+.|+++++. +.. .++..||
T Consensus 73 fl~~G~H~~~DIp~----~l~~~~~~~dsw~~~~~~~p~~~I~~~~pLG~~P~lie~la~rI~eal~~-g~~-~~~~avv 146 (474)
T 2jh3_A 73 FLSEGYVTETVLPR----ELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPE-GTD-PADVTLL 146 (474)
T ss_dssp CSCCSHHHHTHHHH----HHTCCCCSCCCTTCEEEEETTEEEEECCCGGGSTTHHHHHHHHHHHHSCT-TCC-GGGCEEE
T ss_pred ehhccHhHHHHHHH----HHHHhhhccccchhhhhhcCCceEEEeCccCCCHHHHHHHHHHHHHHHhh-ccC-cccceEE
Confidence 55555554432222 2322100 11245677889999999999999999887654 221 1244555
Q ss_pred Eeeecchh--hhHHHHHHHH
Q psy15564 282 FSAHSLPL--RALVTLFARI 299 (1041)
Q Consensus 282 ~SfHS~~~--~tl~eL~~~i 299 (1041)
+.. +|. ..+.++.+.+
T Consensus 147 lvg--dp~a~~~~~~la~~L 164 (474)
T 2jh3_A 147 LLA--ARPGNAALETHAQAL 164 (474)
T ss_dssp EEE--SSTTCHHHHHHHHHH
T ss_pred Eec--CchHHHHHHHHHHHH
Confidence 333 663 3444444434
No 16
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=93.02 E-value=0.71 Score=43.81 Aligned_cols=86 Identities=15% Similarity=0.262 Sum_probs=56.3
Q ss_pred eEEEE-ecCCCccHHHHHHHHHHcCCcEEEEeecCCCCCCcceeeccCchhHHHHhHHHHHHHHHHHHhhcCCCCCccee
Q psy15564 166 KHYVA-FRYADPLTEETLDQIEKDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNKKGSPSNISWS 244 (1041)
Q Consensus 166 ~v~~a-~ry~~P~I~~~l~~l~~~g~~~illfSahP~~~~~~iv~gd~YP~~s~~Tt~s~~~~v~e~L~~~~~~~~l~~q 244 (1041)
+++.+ +.+..|.++++++++.+.|+++++++|.+ ...-..+...+-..+.+ ++.. + .+.+.
T Consensus 37 ~V~~a~le~~~P~l~~~l~~l~~~G~~~vvvvPlf--------------l~~G~H~~~Dip~~~~~-~~~~-~--~~~i~ 98 (126)
T 3lyh_A 37 NAAIAYMELAEPSLDTIVNRAKGQGVEQFTVVPLF--------------LAAGRHLRKDVPAMIER-LEAE-H--GVTIR 98 (126)
T ss_dssp TCEEEESSSSSSBHHHHHHHHHHTTCCEEEEEECC--------------SCCCHHHHHHHHHHHHH-HHHH-H--TCEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHcCCCEEEEEecc--------------cCCCchhhhHHHHHHHH-HHHH-h--CceEE
Confidence 46666 34789999999999999999998877765 11111111112122211 2211 1 13455
Q ss_pred eecCCCCChhHHHHHHHHHHHHHhh
Q psy15564 245 LIDRWSTHPLLCKVFAERIQEELKQ 269 (1041)
Q Consensus 245 sI~r~g~~pwl~pat~d~I~~~l~~ 269 (1041)
..+.+|.+|.+...+.++|++++++
T Consensus 99 ~~~~LG~~p~l~~~l~~ri~~al~~ 123 (126)
T 3lyh_A 99 LAEPIGKNPRLGLAIRDVVKEELER 123 (126)
T ss_dssp ECCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCChHHHHHHHHHHHHHHhc
Confidence 5679999999999999999988764
No 17
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=92.83 E-value=1.2 Score=57.11 Aligned_cols=131 Identities=18% Similarity=0.285 Sum_probs=96.8
Q ss_pred hhhhcchhhHHHHHHHHHHHHHhhHHHHhcCCHHHHHHHHHHHHHhcccCchhHhhhHHHHHHHHHHHHHHhhhccCCCC
Q psy15564 860 SDLLDYPKLSQTYYVLLECLAQDHMSFLASLEPTVFLYILSSISEGLTALDTMVCTGCCATLDHIVTYLFKQITNKGKKK 939 (1041)
Q Consensus 860 ~dLl~yPKL~~~yf~lle~l~e~~~~~l~~L~~~~f~~ll~sl~~GL~s~d~~i~~~c~~~Ld~lat~~~k~~~~~~~~~ 939 (1041)
.++-++|.+.+.||.|+.-+.+.+|..+..++++.|..++.++..++++-+.++...++.++..+.+...+ ..+
T Consensus 812 ~~~~~~pd~~~~~f~ll~~i~~~~~~~l~~~~~~~~~~v~~~~~~al~~~~~~~~~~~l~~l~~l~~~~~~----~~~-- 885 (1049)
T 3m1i_C 812 KDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIER----MGN-- 885 (1049)
T ss_dssp SCSSSSHHHHHHHHHHHHHHHHHCTHHHHHSCHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHH----SCS--
T ss_pred cchhhCHHHHHHHHHHHHHHHHhCHHHHHcCCHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHh----cCC--
Confidence 56778999999999999999999999998899999999999999999999999999999999998865432 001
Q ss_pred CCCCCCCCchhhHHHHHhhhChHHHHHHHHHHHHHHhhccCCchh-cchhhhHHHhhc---------------------C
Q psy15564 940 SGRPGASPTGTDMFLQVLEVRPEILQQILSTVLNIIMFEDCRNQW-SMSRPLLGLILL---------------------N 997 (1041)
Q Consensus 940 ~~~~g~~~~~~~~l~~~l~~~~~ll~~~L~~l~n~ilfed~~~~w-s~Sr~Ll~LIl~---------------------~ 997 (1041)
+ +....+. ...+..++..+|..++-..++... ..+..|..||-+ +
T Consensus 886 --------~--~~~~~f~---~~~~~~l~~~~~~~l~~~~h~s~~~~~~~~l~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 952 (1049)
T 3m1i_C 886 --------V--PFANEFH---KNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLISLVYDNKISVPLYQEAEVPQGTSN 952 (1049)
T ss_dssp --------C--HHHHHHH---HHHHHHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHHHHHTTCCCSCSSCGGGSSTTCCH
T ss_pred --------h--HHHHHHH---HHHHHHHHHHHHHHHhcchHhhhHHHHHHHHHHHHHHHhcCcccccccCccccCCCCCc
Confidence 0 1112222 355677888888888766666554 444455555421 4
Q ss_pred HHHHHHHHHHHH
Q psy15564 998 EEYFNQLRENIV 1009 (1041)
Q Consensus 998 ~~~f~~l~~~li 1009 (1041)
..++.++..+++
T Consensus 953 ~~~~~~~l~~~l 964 (1049)
T 3m1i_C 953 QVYLSQYLANML 964 (1049)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 447777777776
No 18
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=91.18 E-value=0.33 Score=48.17 Aligned_cols=86 Identities=5% Similarity=0.041 Sum_probs=56.2
Q ss_pred ceEEEE-ecC-CCccHHHHHHHHHHcCCcEEEEeecCCCCCCcceeeccCchhHHHHhHHHHHHHHHHHHhh-cC---CC
Q psy15564 165 HKHYVA-FRY-ADPLTEETLDQIEKDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNK-KG---SP 238 (1041)
Q Consensus 165 ~~v~~a-~ry-~~P~I~~~l~~l~~~g~~~illfSahP~~~~~~iv~gd~YP~~s~~Tt~s~~~~v~e~L~~-~~---~~ 238 (1041)
.+++++ +.+ ..|.++++++++ |+++|++ .|+|+.....+...+-+.+.+ +.+ .. ..
T Consensus 57 ~~V~~afle~~~~Psl~~~l~~l---G~~~VvV--------------vPlfL~~G~h~~~DIp~~l~~-~~~~~sw~~~~ 118 (156)
T 1tjn_A 57 DEVKIAFAARKRRPMPDEAIREM---NCDIIYV--------------VPLFISYGLHVTEDLPDLLGF-PRGRGIKEGEF 118 (156)
T ss_dssp SEEEEEECSSSCSSCHHHHHHHC---CCSEEEE--------------EECCSSCSHHHHTHHHHHHTC-CCSSSCEEEEE
T ss_pred CeEEEEEecCCCCCCHHHHHHHc---CCCEEEE--------------EechhcCCchhHhHHHHHHHH-HHhcccccccC
Confidence 478887 557 999999999999 8887754 466666665554433333321 111 00 01
Q ss_pred CCcceeeecCCCCChhHHHHHHHHHHHHHh
Q psy15564 239 SNISWSLIDRWSTHPLLCKVFAERIQEELK 268 (1041)
Q Consensus 239 ~~l~~qsI~r~g~~pwl~pat~d~I~~~l~ 268 (1041)
+.+.+...+.+|.+|.+...+.++|+++++
T Consensus 119 ~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~ 148 (156)
T 1tjn_A 119 EGKKVVICEPIGEDYFVTYAILNSVFRIGR 148 (156)
T ss_dssp TTEEEEECCCSTTCHHHHHHHHHHHHCCC-
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 134566678999999999999999976543
No 19
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=88.98 E-value=0.51 Score=45.02 Aligned_cols=85 Identities=5% Similarity=0.031 Sum_probs=53.6
Q ss_pred ceEEEE-ecC-CCccHHHHHHHHHHcCCcEEEEeecCCCCCCcceeeccCchhHHHHhHHHHHHHHHHHHhh-cC---CC
Q psy15564 165 HKHYVA-FRY-ADPLTEETLDQIEKDGAERVVIFSQYPQDGAERVVIFSQYPQYSCATSGSSLNAIYTHLNK-KG---SP 238 (1041)
Q Consensus 165 ~~v~~a-~ry-~~P~I~~~l~~l~~~g~~~illfSahP~~~~~~iv~gd~YP~~s~~Tt~s~~~~v~e~L~~-~~---~~ 238 (1041)
.+++++ +.+ ..|.++++++++ |+++|+++|. |......+...+.+.+.+ +.+ .. ..
T Consensus 36 ~~V~~a~le~~~~Psl~~~l~~l---g~~~v~v~Pl--------------fl~~G~h~~~di~~~~~~-~~~~~s~~~~~ 97 (133)
T 2xws_A 36 DEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPL--------------FISYGLHVTEDLPDLLGF-PRGRGIKEGEF 97 (133)
T ss_dssp SEEEEEESSTTCSSCHHHHHHHC---CCSEEEEEEC--------------CSSCCHHHHTHHHHHHTC-CCSSSCEEEEE
T ss_pred CcEEeeeeecCCCCCHHHHHHHc---CCCEEEEEee--------------eeCCCcchHhHHHHHHHH-hhccccccccC
Confidence 478887 557 899999999999 8888766554 444444433322222211 111 00 01
Q ss_pred CCcceeeecCCCCChhHHHHHHHHHHHHH
Q psy15564 239 SNISWSLIDRWSTHPLLCKVFAERIQEEL 267 (1041)
Q Consensus 239 ~~l~~qsI~r~g~~pwl~pat~d~I~~~l 267 (1041)
+.+.+...+.+|.+|.+...+.++|++++
T Consensus 98 ~~~~i~~~~pLg~~p~~~~~l~~ri~~a~ 126 (133)
T 2xws_A 98 EGKKVVICEPIGEDYFVTYAILNSVFRIG 126 (133)
T ss_dssp TTEEEEECCCSTTSHHHHHHHHHHHHCCC
T ss_pred CCceEEEcCCCCCCHHHHHHHHHHHHHhh
Confidence 12455666799999999999999987644
No 20
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=88.44 E-value=5 Score=43.05 Aligned_cols=70 Identities=9% Similarity=-0.020 Sum_probs=44.1
Q ss_pred CCCCChhHHHHHHHHHHHHHhhCCCCCCCceEEE--EeeecchhhhHHHH------HHHHh-----hcccccCCCCCHHH
Q psy15564 248 RWSTHPLLCKVFAERIQEELKQFPVEVQKDVIIL--FSAHSLPLRALVTL------FARIT-----KLGWFDSEKDEFVF 314 (1041)
Q Consensus 248 r~g~~pwl~pat~d~I~~~l~~~~~~g~~~v~lV--~SfHS~~~~tl~eL------~~~it-----kl~~~~~ln~~~~F 314 (1041)
++|..+| .|++.+.|++..+. |.++++|+ +-|.|+|...-+-. ..++. -..+.++++++|.+
T Consensus 170 ~~g~~e~-~P~~~~~l~~l~~~----G~~~v~v~P~~l~aG~h~~~Di~~~~~d~~~~~~~~~g~~~~~~~~~LG~~p~i 244 (264)
T 2xwp_A 170 RVGAVES-YPEVDILIDSLRDE----GVTGVHLMPLMLVAGDHAINDMASDDGDSWKMRFNAAGIPATPWLSGLGENPAI 244 (264)
T ss_dssp EEEESSS-SSCHHHHHHHHHHH----TCCEEEEEECSSCCCHHHHHHHHSSSTTSHHHHHHHTTCCEEECCCCGGGCHHH
T ss_pred EEEEeCC-CCCHHHHHHHHHHC----CCCEEEEEeeecccCcchhhhccccchhHHHHHHHHcCCeEEEeccCCCCCHHH
Confidence 5677777 88888888654333 33477777 45588987442111 11121 12256889999999
Q ss_pred HHHHHHHH
Q psy15564 315 RNVIQDVS 322 (1041)
Q Consensus 315 i~~l~~l~ 322 (1041)
++.+.+-+
T Consensus 245 ~~~~~~r~ 252 (264)
T 2xwp_A 245 RAMFVAHL 252 (264)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988744
No 21
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=85.95 E-value=0.36 Score=56.52 Aligned_cols=98 Identities=9% Similarity=-0.016 Sum_probs=62.8
Q ss_pred ccCc-hhHHHHhHHHHHHHHHHHHhhcCCCCCcceeeecCCCC-----ChhHHHHHHHHHHHHHhhCCCCCCCceEEEEe
Q psy15564 210 FSQY-PQYSCATSGSSLNAIYTHLNKKGSPSNISWSLIDRWST-----HPLLCKVFAERIQEELKQFPVEVQKDVIILFS 283 (1041)
Q Consensus 210 gd~Y-P~~s~~Tt~s~~~~v~e~L~~~~~~~~l~~qsI~r~g~-----~pwl~pat~d~I~~~l~~~~~~g~~~v~lV~S 283 (1041)
+|++ ...+..++. .+.+.++. ..+.++|++ + +| .||++|++.+.+++ ++ .++++|++.
T Consensus 149 gdp~a~~~~~~la~----~L~e~lg~--~~v~vaf~s--~-~Pwl~P~~~wleP~l~d~l~~----LG---~krVvV~P~ 212 (474)
T 2jh3_A 149 AARPGNAALETHAQ----ALRERGQF--AGVEVVLES--R-EALTPESHAASAVPLSEWPSR----VE---AGQAVLVPF 212 (474)
T ss_dssp ESSTTCHHHHHHHH----HHHHHCCS--SEEEEEECC--C-C---------CCEEGGGGGGG----CC---SSCEEEEEC
T ss_pred cCchHHHHHHHHHH----HHHHhcCC--CcEEEEEEe--C-CCCCCcccccccCCHHHHHHH----cC---CCeEEEEEe
Confidence 4554 445555443 44344331 123467887 4 33 56777799988753 33 347777788
Q ss_pred eecchhhhHHHHHHHH----------hhcccccCCCCCHHHHHHHHHHHH
Q psy15564 284 AHSLPLRALVTLFARI----------TKLGWFDSEKDEFVFRNVIQDVSN 323 (1041)
Q Consensus 284 fHS~~~~tl~eL~~~i----------tkl~~~~~ln~~~~Fi~~l~~l~~ 323 (1041)
|.+++.++..++..+. .++.+.+++|++|.|++++.+.++
T Consensus 213 Fl~dG~h~~~DI~~~~~~~~~~~p~G~~v~~~~~LG~~p~~~~ll~~rv~ 262 (474)
T 2jh3_A 213 LTHLGKHAAERLQQALAQAAERFPQAPPLHVGGPVGEHPAVAEVVLALAA 262 (474)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHCTTCCCEEECCCGGGSTTHHHHHHHHHH
T ss_pred eccCCcchHHHHHHHHHHHHHhccCCcEEEecCCCCCCHHHHHHHHHHHH
Confidence 9999999998886443 124588999999999999998663
No 22
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=66.52 E-value=2.5e+02 Score=36.50 Aligned_cols=32 Identities=22% Similarity=0.275 Sum_probs=24.5
Q ss_pred chhHHHHHHhhcCCchhhhhhHHHHHHHhhhhhc
Q psy15564 577 NTLKLFFNLYHSLPSTLSHLALACLVQIASVRRS 610 (1041)
Q Consensus 577 ~~~~lff~~y~~~~~~ls~~~l~clv~~~s~rrs 610 (1041)
..++++|+++. .+.+...|++||+++++.|++
T Consensus 249 ~ll~~l~~~l~--~~~lr~~A~ecL~~i~s~~~~ 280 (1204)
T 3a6p_A 249 KLLEILCLLLN--EQELQLGAAECLLIAVSRKGK 280 (1204)
T ss_dssp HHHHHHHHGGG--CTTTHHHHHHHHHHHHTCCSC
T ss_pred hHHHHHHHHcC--CHHHHHHHHHHHHHHHhCCCC
Confidence 47788877765 345666799999999998775
No 23
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=53.60 E-value=3.8e+02 Score=32.72 Aligned_cols=156 Identities=14% Similarity=0.154 Sum_probs=91.0
Q ss_pred chhhHHHHHHHHHHHHHhhHHHHhcCCHHHHHHHHHHHHHhcccCchhHhhhHHHHHHHHHHHHHHh-------------
Q psy15564 865 YPKLSQTYYVLLECLAQDHMSFLASLEPTVFLYILSSISEGLTALDTMVCTGCCATLDHIVTYLFKQ------------- 931 (1041)
Q Consensus 865 yPKL~~~yf~lle~l~e~~~~~l~~L~~~~f~~ll~sl~~GL~s~d~~i~~~c~~~Ld~lat~~~k~------------- 931 (1041)
.|.+.+..|.++..++...+..+.. .+..++..+..++..-+.++...++.++..++..+-.+
T Consensus 642 ~~~vr~~a~~~l~~l~~~~~~~~~~----~l~~~lp~l~~~l~~~~~~v~~~a~~alg~i~~~~~~~~~p~~~~il~~L~ 717 (852)
T 4fdd_A 642 MPEVRQSSFALLGDLTKACFQHVKP----CIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLV 717 (852)
T ss_dssp SHHHHHHHHHHHHHHHHHCGGGTGG----GHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHGGGGGGGTHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHhhHHHHH----HHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHH
Confidence 4789999999999999776654332 24446667777777767788888888888887655322
Q ss_pred --hhccCCCCCCCCCCCCchhhHHHHHhhhChHHH----HHHHHHHHHHHhh-ccCCchhcchhhhHHHhhcCHHH----
Q psy15564 932 --ITNKGKKKSGRPGASPTGTDMFLQVLEVRPEIL----QQILSTVLNIIMF-EDCRNQWSMSRPLLGLILLNEEY---- 1000 (1041)
Q Consensus 932 --~~~~~~~~~~~~g~~~~~~~~l~~~l~~~~~ll----~~~L~~l~n~ilf-ed~~~~ws~Sr~Ll~LIl~~~~~---- 1000 (1041)
++.+..+ ...-.-....+.++...+|+.+ .+++...++.+-- +|...-=++-+.|..+|..||+.
T Consensus 718 ~~l~~~~~~----~~~~~~a~~~igrl~~~~~~~~~~~l~~~~~~~~~~l~~~~d~~e~~~a~~~l~~li~~~p~~~~~~ 793 (852)
T 4fdd_A 718 EIINRPNTP----KTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQD 793 (852)
T ss_dssp HHHTCSSCC----HHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHHHHHCGGGTGGG
T ss_pred HHhCCCCCC----chHHHHHHHHHHHHHHhCHHHhCccHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhChHhHHHH
Confidence 2111100 0000000113445555566644 5666666665532 33211127778899999999974
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHhhc
Q psy15564 1001 FNQLRENIVRGQPPDKQASMVQWFENLMNS 1030 (1041)
Q Consensus 1001 f~~l~~~li~~Q~~~~qq~l~~aF~~Lm~~ 1030 (1041)
|-.+...+.+-..+ ++.+.+.|.+++.+
T Consensus 794 ~~~~~~~~~~~~~~--~~~l~~~~~~~l~~ 821 (852)
T 4fdd_A 794 FIFFCDAVASWINP--KDDLRDMFCKILHG 821 (852)
T ss_dssp HHHHHHHHHTCSSC--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC--CHHHHHHHHHHHHH
Confidence 33334444443322 44577777777654
No 24
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=41.32 E-value=1.7e+02 Score=37.24 Aligned_cols=68 Identities=13% Similarity=0.148 Sum_probs=49.0
Q ss_pred hhhhcchhhHHHHHHHHHHHHHhhHHHHh-c-CCHHHHHHHHHHHHHhcc-cCchhHhhhHHHHHHHHHHH
Q psy15564 860 SDLLDYPKLSQTYYVLLECLAQDHMSFLA-S-LEPTVFLYILSSISEGLT-ALDTMVCTGCCATLDHIVTY 927 (1041)
Q Consensus 860 ~dLl~yPKL~~~yf~lle~l~e~~~~~l~-~-L~~~~f~~ll~sl~~GL~-s~d~~i~~~c~~~Ld~lat~ 927 (1041)
+++..-+-|.++||.|+..+..++...+. + -....|..++.++..+-. .-|+.+.+.|+..+.+++..
T Consensus 801 d~~r~~~~l~r~~~~fl~~i~~~~~~~v~~s~~n~~~l~~~l~~l~~~a~~~~d~~~~K~a~~~l~~~v~~ 871 (980)
T 3ibv_A 801 DDAVKQNDLRKSYISFILQLLNKGFGSILFTEENQVYFDPLINSILHFANLVGEPATQKSSIALVSKMVSL 871 (980)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCTGGGGSHHHHTTHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchhhhcCCcchHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHH
Confidence 34556677999999999999987754442 2 124568888888886544 46999999999999999954
No 25
>4g4s_P Proteasome assembly chaperone 2; alpha beta, NTN-hydrolase, peptide binding, hydrolase-chaper complex; HET: LDZ; 2.49A {Saccharomyces cerevisiae}
Probab=25.90 E-value=26 Score=37.75 Aligned_cols=28 Identities=25% Similarity=0.523 Sum_probs=24.9
Q ss_pred cccccccCCCcccccCchhHHHHHHhhh
Q psy15564 401 LNNHTIPTSWRPAFLDPNTLKLFFNLYH 428 (1041)
Q Consensus 401 ~~~~~ip~~w~~~~~~~~~~~~~f~~y~ 428 (1041)
....++|.||+.+|=+.....+|-|+|+
T Consensus 242 ~~~w~~P~SW~~lfG~~~~~~~f~~~~~ 269 (269)
T 4g4s_P 242 IVKFVRPISWQGAYGMADARDKFVDLYN 269 (269)
T ss_dssp -CCCCCBGGGGGTTCSSCHHHHHHHHHC
T ss_pred cCCccCCCccccccCCCCCchHHHhhcC
Confidence 3468999999999999999999999994
Done!