Query psy15568
Match_columns 1231
No_of_seqs 737 out of 5163
Neff 7.2
Searched_HMMs 46136
Date Sat Aug 17 00:36:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15568.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15568hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2230|consensus 100.0 6E-93 1.3E-97 797.9 35.6 466 1-556 179-715 (867)
2 COG3250 LacZ Beta-galactosidas 100.0 2.5E-55 5.5E-60 544.6 26.3 401 43-535 172-651 (808)
3 COG0462 PrsA Phosphoribosylpyr 100.0 7.4E-48 1.6E-52 424.7 11.4 233 923-1225 61-314 (314)
4 PRK10150 beta-D-glucuronidase; 100.0 8.9E-45 1.9E-49 453.0 37.3 245 2-307 155-420 (604)
5 PRK10340 ebgA cryptic beta-D-g 100.0 4.2E-43 9.1E-48 454.4 44.2 242 43-307 199-452 (1021)
6 PRK09525 lacZ beta-D-galactosi 100.0 4.5E-41 9.7E-46 434.4 43.5 241 43-307 211-465 (1027)
7 KOG1503|consensus 100.0 2.5E-41 5.5E-46 347.3 15.0 118 1114-1231 237-354 (354)
8 KOG1448|consensus 100.0 6.3E-42 1.4E-46 366.8 7.8 131 526-670 65-197 (316)
9 PRK04923 ribose-phosphate pyro 100.0 2.1E-39 4.5E-44 368.8 14.2 233 925-1225 65-318 (319)
10 PTZ00145 phosphoribosylpyropho 100.0 1.6E-39 3.6E-44 376.2 13.4 244 919-1226 171-437 (439)
11 PRK06827 phosphoribosylpyropho 100.0 1.2E-38 2.6E-43 367.7 17.4 131 525-670 105-241 (382)
12 PRK02269 ribose-phosphate pyro 100.0 1.2E-38 2.5E-43 364.2 14.0 235 925-1226 64-318 (320)
13 PRK00553 ribose-phosphate pyro 100.0 1.9E-38 4.1E-43 362.8 12.9 231 925-1225 68-322 (332)
14 PRK02458 ribose-phosphate pyro 100.0 2.7E-37 5.8E-42 352.6 13.0 231 925-1226 68-318 (323)
15 PRK03092 ribose-phosphate pyro 100.0 2.8E-37 6.1E-42 350.4 13.0 236 924-1226 47-302 (304)
16 COG0462 PrsA Phosphoribosylpyr 100.0 2.4E-37 5.1E-42 341.5 5.6 248 525-1049 65-314 (314)
17 PRK02812 ribose-phosphate pyro 100.0 8E-36 1.7E-40 340.5 13.7 232 924-1225 79-330 (330)
18 PLN02369 ribose-phosphate pyro 100.0 2.1E-34 4.5E-39 326.7 12.9 233 925-1225 50-302 (302)
19 PRK01259 ribose-phosphate pyro 100.0 2.7E-34 5.9E-39 327.1 13.0 231 925-1225 59-309 (309)
20 PRK07199 phosphoribosylpyropho 100.0 2E-34 4.4E-39 326.7 11.7 213 927-1217 62-296 (301)
21 PF14572 Pribosyl_synth: Phosp 100.0 2.8E-34 6.1E-39 295.6 11.1 175 1019-1225 4-184 (184)
22 PLN02297 ribose-phosphate pyro 100.0 5.5E-33 1.2E-37 314.5 11.6 214 928-1212 79-325 (326)
23 TIGR01251 ribP_PPkin ribose-ph 100.0 4.3E-31 9.4E-36 301.9 13.8 229 925-1225 60-308 (308)
24 PRK00934 ribose-phosphate pyro 100.0 2.3E-30 4.9E-35 292.7 11.3 211 923-1212 55-284 (285)
25 PTZ00145 phosphoribosylpyropho 100.0 1.5E-30 3.3E-35 301.8 6.7 246 526-1049 181-436 (439)
26 PRK04923 ribose-phosphate pyro 100.0 3E-30 6.6E-35 293.9 6.9 247 525-1048 67-317 (319)
27 PF02836 Glyco_hydro_2_C: Glyc 100.0 2.4E-29 5.3E-34 288.3 13.0 116 189-307 8-134 (298)
28 PRK02269 ribose-phosphate pyro 100.0 1.6E-29 3.5E-34 289.1 7.0 249 526-1049 67-317 (320)
29 PRK00553 ribose-phosphate pyro 100.0 2E-29 4.3E-34 288.7 7.1 250 526-1049 71-322 (332)
30 KOG2230|consensus 100.0 6.4E-28 1.4E-32 273.5 15.4 238 719-964 418-722 (867)
31 PRK02458 ribose-phosphate pyro 99.9 1.9E-28 4.2E-33 280.0 7.2 245 526-1049 71-317 (323)
32 PRK03092 ribose-phosphate pyro 99.9 1.7E-28 3.6E-33 278.9 6.2 248 526-1049 51-301 (304)
33 PRK02812 ribose-phosphate pyro 99.9 1.5E-27 3.3E-32 272.7 6.4 129 526-670 83-214 (330)
34 PRK01259 ribose-phosphate pyro 99.9 1.4E-26 3E-31 264.0 6.5 130 525-670 61-192 (309)
35 PLN02369 ribose-phosphate pyro 99.9 2.5E-26 5.5E-31 260.8 7.0 131 526-670 53-186 (302)
36 PLN02297 ribose-phosphate pyro 99.9 3.8E-26 8.2E-31 259.0 5.1 128 526-670 79-215 (326)
37 PRK07199 phosphoribosylpyropho 99.9 1.4E-25 3.1E-30 254.6 4.6 127 526-670 63-194 (301)
38 TIGR01251 ribP_PPkin ribose-ph 99.9 4.7E-24 1E-28 244.1 7.1 129 526-670 63-193 (308)
39 PRK00934 ribose-phosphate pyro 99.9 2.9E-23 6.4E-28 234.9 4.4 127 526-670 60-188 (285)
40 PF14572 Pribosyl_synth: Phosp 99.8 5.6E-21 1.2E-25 197.4 1.0 112 847-1049 73-184 (184)
41 PF00703 Glyco_hydro_2: Glycos 99.4 9E-12 1.9E-16 120.7 16.5 108 53-167 1-110 (110)
42 KOG1503|consensus 99.3 9.4E-13 2E-17 137.2 3.3 279 525-1052 69-351 (354)
43 PRK08525 amidophosphoribosyltr 99.3 7.3E-12 1.6E-16 150.3 9.1 91 1119-1209 334-426 (445)
44 PRK13811 orotate phosphoribosy 98.9 1.6E-08 3.5E-13 106.4 13.3 137 969-1177 18-156 (170)
45 PRK05793 amidophosphoribosyltr 98.9 3.1E-09 6.7E-14 128.5 8.6 92 1118-1209 347-439 (469)
46 PLN02293 adenine phosphoribosy 98.8 1.4E-08 3E-13 108.2 10.3 63 1120-1182 120-183 (187)
47 PF03198 Glyco_hydro_72: Gluca 98.8 1.7E-08 3.6E-13 112.9 10.9 123 183-307 14-147 (314)
48 PRK06827 phosphoribosylpyropho 98.8 1.5E-09 3.3E-14 126.7 2.3 243 925-1226 103-369 (382)
49 KOG1448|consensus 98.8 7.7E-10 1.7E-14 120.7 -1.3 232 926-1226 63-315 (316)
50 PRK09162 hypoxanthine-guanine 98.7 6.2E-08 1.3E-12 103.1 8.9 44 1118-1161 91-134 (181)
51 PRK02304 adenine phosphoribosy 98.6 1.1E-07 2.3E-12 100.9 10.1 68 1114-1181 102-171 (175)
52 TIGR01203 HGPRTase hypoxanthin 98.6 1.7E-07 3.6E-12 98.3 9.3 44 1118-1161 78-121 (166)
53 PRK11595 DNA utilization prote 98.6 5.6E-08 1.2E-12 107.3 5.1 52 1108-1159 171-222 (227)
54 PRK00129 upp uracil phosphorib 98.5 1.8E-07 3.9E-12 101.9 8.8 69 1117-1187 117-185 (209)
55 COG3250 LacZ Beta-galactosidas 98.5 1.3E-08 2.9E-13 128.7 -0.1 211 719-937 380-651 (808)
56 TIGR00201 comF comF family pro 98.5 5.5E-08 1.2E-12 104.5 4.2 67 1081-1159 120-187 (190)
57 PRK07322 adenine phosphoribosy 98.5 3.3E-07 7.1E-12 97.3 8.5 139 977-1161 18-157 (178)
58 PRK02277 orotate phosphoribosy 98.5 5E-07 1.1E-11 97.7 9.7 60 1120-1182 136-195 (200)
59 PRK13812 orotate phosphoribosy 98.4 1.3E-06 2.9E-11 92.3 11.5 58 1119-1177 101-159 (176)
60 COG1926 Predicted phosphoribos 98.4 3.7E-07 8E-12 95.8 6.7 85 1120-1207 120-205 (220)
61 PRK13809 orotate phosphoribosy 98.4 1.6E-06 3.5E-11 93.7 10.8 59 1118-1177 111-170 (206)
62 PRK07272 amidophosphoribosyltr 98.4 4.9E-07 1.1E-11 109.3 6.6 99 1111-1209 336-436 (484)
63 TIGR01090 apt adenine phosphor 98.3 1.9E-06 4.1E-11 90.8 10.1 53 1122-1174 107-159 (169)
64 COG1040 ComFC Predicted amidop 98.3 4.4E-07 9.4E-12 99.7 5.1 66 1083-1159 153-219 (225)
65 PRK12560 adenine phosphoribosy 98.3 2.1E-06 4.5E-11 91.8 10.2 70 1116-1185 106-178 (187)
66 PRK05205 bifunctional pyrimidi 98.3 2E-06 4.4E-11 91.2 9.5 44 1117-1160 88-132 (176)
67 PRK15423 hypoxanthine phosphor 98.3 1.7E-06 3.8E-11 91.5 8.3 41 1119-1159 87-127 (178)
68 KOG2024|consensus 98.2 1.9E-06 4.1E-11 92.7 6.6 116 43-195 181-297 (297)
69 PRK13811 orotate phosphoribosy 98.2 7.1E-06 1.5E-10 86.5 9.9 85 583-669 3-89 (170)
70 PF00156 Pribosyltran: Phospho 98.2 2.4E-06 5.2E-11 85.0 6.0 45 1117-1161 81-125 (125)
71 TIGR00336 pyrE orotate phospho 98.2 1.2E-05 2.5E-10 85.2 11.4 56 1120-1175 103-159 (173)
72 PRK09123 amidophosphoribosyltr 98.1 2.7E-06 5.8E-11 103.2 6.4 82 1121-1209 357-446 (479)
73 TIGR01091 upp uracil phosphori 98.1 3.7E-06 8E-11 91.5 6.6 57 1117-1175 115-171 (207)
74 PLN02238 hypoxanthine phosphor 98.1 1E-05 2.2E-10 86.7 9.4 47 1119-1168 92-138 (189)
75 PRK00455 pyrE orotate phosphor 98.1 2.1E-05 4.4E-10 85.5 11.5 56 1121-1177 110-165 (202)
76 PRK08341 amidophosphoribosyltr 98.0 9.3E-06 2E-10 97.5 7.5 91 1119-1209 329-420 (442)
77 TIGR01367 pyrE_Therm orotate p 98.0 1.5E-05 3.4E-10 85.2 7.7 41 1122-1162 103-143 (187)
78 COG0856 Orotate phosphoribosyl 98.0 5.8E-06 1.3E-10 83.8 4.1 42 1118-1159 135-176 (203)
79 PRK09246 amidophosphoribosyltr 97.9 6.5E-06 1.4E-10 100.9 4.4 52 1111-1162 344-396 (501)
80 COG0634 Hpt Hypoxanthine-guani 97.9 1.1E-05 2.4E-10 82.9 5.2 44 1116-1159 85-128 (178)
81 PRK09219 xanthine phosphoribos 97.9 3.4E-05 7.3E-10 82.5 9.0 72 1115-1186 106-181 (189)
82 PTZ00149 hypoxanthine phosphor 97.9 1.7E-05 3.7E-10 87.4 5.9 41 1119-1159 145-185 (241)
83 PF00150 Cellulase: Cellulase 97.8 6.2E-05 1.3E-09 85.4 10.4 109 191-307 3-133 (281)
84 PRK06781 amidophosphoribosyltr 97.8 1.8E-05 3.8E-10 95.9 6.0 102 1108-1209 331-434 (471)
85 COG0503 Apt Adenine/guanine ph 97.8 5.1E-05 1.1E-09 80.6 8.6 61 1113-1173 103-165 (179)
86 PRK07631 amidophosphoribosyltr 97.8 1.4E-05 3.1E-10 96.5 4.8 100 1110-1209 333-434 (475)
87 PTZ00271 hypoxanthine-guanine 97.8 2.5E-05 5.4E-10 84.7 6.0 42 1118-1159 112-153 (211)
88 TIGR01744 XPRTase xanthine pho 97.8 6.5E-05 1.4E-09 80.6 8.2 71 1115-1185 106-180 (191)
89 PRK13810 orotate phosphoribosy 97.8 0.00018 3.9E-09 76.9 11.5 59 1119-1178 116-175 (187)
90 PLN02440 amidophosphoribosyltr 97.8 5.2E-05 1.1E-09 92.5 8.2 42 1120-1161 336-377 (479)
91 PF02449 Glyco_hydro_42: Beta- 97.7 4.6E-05 9.9E-10 90.8 7.1 91 217-307 10-140 (374)
92 PLN03059 beta-galactosidase; P 97.7 0.00034 7.4E-09 88.4 14.1 110 189-305 37-187 (840)
93 COG1874 LacA Beta-galactosidas 97.7 0.00019 4.1E-09 89.4 11.6 112 189-308 8-164 (673)
94 PRK08558 adenine phosphoribosy 97.6 0.0002 4.3E-09 79.5 9.9 51 1122-1173 174-224 (238)
95 PRK06031 phosphoribosyltransfe 97.6 0.00011 2.5E-09 80.9 7.5 68 1121-1189 151-221 (233)
96 TIGR01134 purF amidophosphorib 97.6 9.4E-05 2E-09 89.5 7.4 83 1119-1209 333-424 (442)
97 COG0461 PyrE Orotate phosphori 97.5 0.00023 4.9E-09 76.1 8.0 59 1119-1180 107-167 (201)
98 TIGR01743 purR_Bsub pur operon 97.5 0.00033 7.2E-09 78.5 9.2 71 1114-1187 182-254 (268)
99 PF01301 Glyco_hydro_35: Glyco 97.5 0.0005 1.1E-08 79.9 11.0 112 189-306 2-151 (319)
100 KOG1712|consensus 97.5 0.00016 3.6E-09 72.6 5.7 62 1120-1181 117-179 (183)
101 PRK07349 amidophosphoribosyltr 97.3 0.00015 3.3E-09 88.2 4.1 83 1119-1209 372-463 (500)
102 PRK05500 bifunctional orotidin 97.3 0.00055 1.2E-08 82.8 8.3 58 1118-1176 386-444 (477)
103 KOG3367|consensus 97.3 0.00029 6.3E-09 71.3 4.7 39 1121-1159 122-160 (216)
104 PRK09213 pur operon repressor; 97.2 0.00063 1.4E-08 76.5 7.0 62 1123-1187 195-256 (271)
105 PRK06388 amidophosphoribosyltr 97.1 0.00051 1.1E-08 83.4 5.7 82 1120-1209 352-442 (474)
106 PRK07847 amidophosphoribosyltr 97.1 0.00041 8.9E-09 84.8 4.0 83 1121-1210 364-454 (510)
107 COG3934 Endo-beta-mannanase [C 96.9 0.001 2.2E-08 77.6 5.4 88 217-304 26-147 (587)
108 PF14488 DUF4434: Domain of un 96.7 0.0076 1.6E-07 63.3 9.9 92 216-307 19-132 (166)
109 PRK09177 xanthine-guanine phos 96.6 0.0021 4.6E-08 66.8 4.5 29 1121-1149 81-109 (156)
110 PLN02541 uracil phosphoribosyl 96.6 0.0022 4.8E-08 71.1 4.8 54 1120-1175 152-208 (244)
111 COG0035 Upp Uracil phosphoribo 96.5 0.0035 7.5E-08 67.1 5.1 67 1118-1186 118-185 (210)
112 COG2236 Predicted phosphoribos 96.4 0.002 4.4E-08 68.6 2.7 37 1122-1158 85-121 (192)
113 PF13793 Pribosyltran_N: N-ter 96.3 0.00012 2.5E-09 72.2 -6.5 53 526-593 62-116 (116)
114 COG2065 PyrR Pyrimidine operon 96.2 0.018 3.9E-07 58.7 8.2 43 1117-1159 89-132 (179)
115 COG0034 PurF Glutamine phospho 96.0 0.0032 7E-08 73.9 2.0 90 1119-1208 343-433 (470)
116 PRK10150 beta-D-glucuronidase; 95.8 0.011 2.5E-07 74.9 6.0 54 721-793 393-448 (604)
117 PF14681 UPRTase: Uracil phosp 95.5 0.011 2.4E-07 64.4 3.9 67 1118-1186 115-183 (207)
118 PF00331 Glyco_hydro_10: Glyco 95.4 0.043 9.4E-07 64.0 8.6 62 444-512 252-319 (320)
119 PRK13812 orotate phosphoribosy 95.0 0.12 2.6E-06 55.0 9.4 86 583-670 4-92 (176)
120 PF02836 Glyco_hydro_2_C: Glyc 94.6 0.026 5.6E-07 65.2 3.7 51 721-795 107-159 (298)
121 KOG0572|consensus 93.9 0.042 9.1E-07 62.8 3.2 43 1118-1160 350-392 (474)
122 PRK13809 orotate phosphoribosy 93.8 0.33 7.2E-06 52.9 9.8 84 584-670 13-101 (206)
123 PF13204 DUF4038: Protein of u 93.5 0.11 2.4E-06 59.7 5.9 110 190-305 7-156 (289)
124 PF15609 PRTase_2: Phosphoribo 93.4 0.11 2.4E-06 55.1 5.0 42 1124-1165 121-162 (191)
125 PRK10340 ebgA cryptic beta-D-g 93.3 0.071 1.5E-06 71.4 4.3 48 721-792 425-474 (1021)
126 smart00633 Glyco_10 Glycosyl h 93.2 0.19 4E-06 56.8 7.0 52 448-508 199-253 (254)
127 PRK08525 amidophosphoribosyltr 92.4 0.16 3.5E-06 61.9 5.3 44 855-898 338-381 (445)
128 KOG0496|consensus 91.7 0.93 2E-05 56.1 10.6 112 189-307 27-177 (649)
129 PRK12560 adenine phosphoribosy 91.6 0.42 9.1E-06 51.4 6.9 71 596-670 11-85 (187)
130 PRK09525 lacZ beta-D-galactosi 91.6 0.19 4.1E-06 67.3 5.2 49 720-792 437-487 (1027)
131 PRK09162 hypoxanthine-guanine 90.7 0.45 9.8E-06 50.8 6.0 38 854-891 94-131 (181)
132 TIGR01203 HGPRTase hypoxanthin 90.2 0.52 1.1E-05 49.7 5.9 36 854-889 81-116 (166)
133 PRK02304 adenine phosphoribosy 86.5 1.9 4.2E-05 45.7 7.3 54 617-670 28-85 (175)
134 PRK07322 adenine phosphoribosy 85.0 1.7 3.7E-05 46.3 6.0 66 604-670 17-86 (178)
135 TIGR03356 BGL beta-galactosida 84.9 3.4 7.3E-05 50.4 9.2 90 216-307 53-164 (427)
136 PRK05793 amidophosphoribosyltr 83.6 1.6 3.6E-05 53.6 5.8 45 854-898 350-394 (469)
137 KOG1017|consensus 82.5 2.9 6.3E-05 44.1 6.1 69 1118-1188 183-254 (267)
138 TIGR00336 pyrE orotate phospho 82.4 4.8 0.0001 42.7 8.1 42 856-901 107-148 (173)
139 PRK00455 pyrE orotate phosphor 81.1 5.6 0.00012 43.3 8.3 32 638-669 66-97 (202)
140 PLN02293 adenine phosphoribosy 77.6 7.5 0.00016 41.8 7.7 35 636-670 62-96 (187)
141 PRK15423 hypoxanthine phosphor 77.4 8.8 0.00019 41.0 8.1 33 854-886 89-121 (178)
142 PRK08558 adenine phosphoribosy 76.9 8.6 0.00019 43.0 8.2 44 855-902 174-217 (238)
143 COG5309 Exo-beta-1,3-glucanase 76.8 11 0.00025 42.0 8.7 86 212-306 58-144 (305)
144 PF07745 Glyco_hydro_53: Glyco 76.1 6.4 0.00014 46.1 7.2 90 220-309 27-139 (332)
145 PF13793 Pribosyltran_N: N-ter 76.0 4.3 9.4E-05 40.1 5.0 52 1114-1167 37-92 (116)
146 PRK15014 6-phospho-beta-glucos 73.0 9.7 0.00021 47.1 8.0 88 217-306 69-180 (477)
147 PRK13511 6-phospho-beta-galact 72.7 11 0.00024 46.6 8.4 89 216-307 53-163 (469)
148 COG2730 BglC Endoglucanase [Ca 69.5 16 0.00034 44.3 8.7 88 219-306 75-192 (407)
149 PRK05205 bifunctional pyrimidi 68.7 22 0.00048 37.7 8.7 32 853-884 91-122 (176)
150 PRK02277 orotate phosphoribosy 68.3 17 0.00036 39.6 7.7 33 854-886 137-169 (200)
151 COG3534 AbfA Alpha-L-arabinofu 65.9 18 0.00039 43.4 7.7 45 220-264 52-127 (501)
152 COG3693 XynA Beta-1,4-xylanase 64.6 1.3E+02 0.0028 35.0 13.8 62 244-307 84-153 (345)
153 TIGR01233 lacG 6-phospho-beta- 64.6 21 0.00046 44.1 8.5 89 216-307 52-162 (467)
154 PF15610 PRTase_3: PRTase ComF 60.7 9.6 0.00021 42.8 4.1 53 1107-1159 120-173 (274)
155 PRK00129 upp uracil phosphorib 59.0 16 0.00034 40.1 5.4 38 854-891 121-158 (209)
156 PLN02238 hypoxanthine phosphor 56.3 30 0.00065 37.3 6.9 35 854-888 94-128 (189)
157 PRK09852 cryptic 6-phospho-bet 53.4 39 0.00085 41.8 8.2 90 216-307 70-183 (474)
158 PF12876 Cellulase-like: Sugar 53.1 7.7 0.00017 36.2 1.6 20 286-305 1-20 (88)
159 PRK08341 amidophosphoribosyltr 49.6 22 0.00047 43.5 5.1 39 854-892 331-369 (442)
160 PLN02849 beta-glucosidase 48.3 53 0.0011 41.0 8.2 90 216-307 78-190 (503)
161 PRK13810 orotate phosphoribosy 47.8 71 0.0015 34.4 8.1 86 584-671 18-108 (187)
162 PF00232 Glyco_hydro_1: Glycos 47.1 33 0.00072 42.2 6.2 90 216-307 57-169 (455)
163 PLN02814 beta-glucosidase 45.8 62 0.0013 40.4 8.3 90 216-307 76-188 (504)
164 PF14871 GHL6: Hypothetical gl 44.3 75 0.0016 32.2 7.2 19 272-290 105-123 (132)
165 TIGR01367 pyrE_Therm orotate p 44.3 43 0.00093 36.0 5.8 34 636-669 58-91 (187)
166 TIGR01090 apt adenine phosphor 43.0 42 0.00091 35.3 5.4 45 625-669 35-79 (169)
167 PLN02998 beta-glucosidase 42.9 64 0.0014 40.2 7.7 90 216-307 81-193 (497)
168 COG2723 BglB Beta-glucosidase/ 41.1 1.3E+02 0.0028 36.9 9.6 90 216-307 58-171 (460)
169 PRK09593 arb 6-phospho-beta-gl 41.0 1E+02 0.0022 38.3 9.0 89 216-306 72-184 (478)
170 PRK09589 celA 6-phospho-beta-g 40.6 99 0.0021 38.4 8.9 90 216-307 66-179 (476)
171 PF03659 Glyco_hydro_71: Glyco 38.9 1.2E+02 0.0026 36.5 9.0 76 216-299 16-96 (386)
172 TIGR01744 XPRTase xanthine pho 38.8 69 0.0015 34.6 6.3 48 623-670 37-84 (191)
173 PRK06031 phosphoribosyltransfe 38.4 2E+02 0.0043 32.1 10.0 63 855-921 152-214 (233)
174 PRK09219 xanthine phosphoribos 38.3 61 0.0013 34.9 5.8 46 625-670 39-84 (189)
175 PF02638 DUF187: Glycosyl hydr 37.4 52 0.0011 38.4 5.5 44 216-259 18-87 (311)
176 KOG0814|consensus 34.6 31 0.00067 36.2 2.6 44 1117-1163 24-67 (237)
177 PF01261 AP_endonuc_2: Xylose 33.0 1.8E+02 0.004 30.7 8.7 49 216-264 70-134 (213)
178 cd00019 AP2Ec AP endonuclease 32.3 1.2E+02 0.0025 34.6 7.3 79 217-303 85-179 (279)
179 PF05706 CDKN3: Cyclin-depende 31.8 1.6E+02 0.0035 31.1 7.3 77 217-302 58-142 (168)
180 KOG2836|consensus 31.4 1.7E+02 0.0037 29.6 7.0 79 212-301 24-105 (173)
181 PF06574 FAD_syn: FAD syntheta 30.7 40 0.00086 35.2 2.8 77 581-668 63-146 (157)
182 COG3867 Arabinogalactan endo-1 30.5 1.6E+02 0.0036 33.6 7.5 93 217-309 63-185 (403)
183 COG0856 Orotate phosphoribosyl 30.5 1.5E+02 0.0032 31.5 6.6 78 636-732 86-168 (203)
184 COG0296 GlgB 1,4-alpha-glucan 30.2 59 0.0013 41.3 4.7 49 216-264 164-236 (628)
185 COG0634 Hpt Hypoxanthine-guani 29.2 18 0.00039 38.1 0.0 41 851-891 87-127 (178)
186 PF10633 NPCBM_assoc: NPCBM-as 28.7 3.8E+02 0.0082 24.1 8.6 70 72-152 6-76 (78)
187 PF01488 Shikimate_DH: Shikima 28.1 1E+02 0.0022 31.1 5.2 37 1119-1159 7-43 (135)
188 TIGR00542 hxl6Piso_put hexulos 27.6 2.3E+02 0.005 32.1 8.6 77 217-303 94-185 (279)
189 PRK09213 pur operon repressor; 27.0 1.1E+02 0.0024 34.9 5.8 35 636-670 130-164 (271)
190 TIGR03234 OH-pyruv-isom hydrox 26.9 2.2E+02 0.0048 31.7 8.3 81 217-302 84-179 (254)
191 cd04814 PA_M28_1 PA_M28_1: Pro 26.8 91 0.002 32.1 4.5 42 1121-1162 45-100 (142)
192 TIGR01743 purR_Bsub pur operon 26.7 1.2E+02 0.0025 34.7 5.8 35 636-670 128-162 (268)
193 PF06230 DUF1009: Protein of u 26.0 90 0.0019 34.4 4.6 39 221-259 173-213 (214)
194 PRK14042 pyruvate carboxylase 25.6 3.3E+02 0.0071 34.8 10.0 80 196-283 80-163 (596)
195 COG2876 AroA 3-deoxy-D-arabino 25.1 1.7E+02 0.0038 33.1 6.5 59 194-264 45-118 (286)
196 PRK13209 L-xylulose 5-phosphat 24.4 3.7E+02 0.008 30.4 9.6 47 217-263 99-159 (283)
197 COG0503 Apt Adenine/guanine ph 24.2 2.3E+02 0.0049 30.3 7.2 35 636-670 53-87 (179)
198 cd04820 PA_M28_1_1 PA_M28_1_1: 23.5 1.2E+02 0.0025 31.1 4.5 39 1121-1159 47-93 (137)
199 PF00156 Pribosyltran: Phospho 23.1 1.5E+02 0.0032 28.9 5.3 45 622-668 15-59 (125)
200 cd01529 4RHOD_Repeats Member o 23.0 1.2E+02 0.0027 28.1 4.4 33 1123-1158 55-87 (96)
201 smart00450 RHOD Rhodanese Homo 22.8 1.2E+02 0.0026 27.6 4.3 37 1120-1159 52-88 (100)
202 PF02142 MGS: MGS-like domain 22.4 68 0.0015 30.2 2.6 49 1132-1184 15-68 (95)
203 cd00158 RHOD Rhodanese Homolog 21.4 1.3E+02 0.0029 26.8 4.3 37 1120-1159 46-82 (89)
204 PRK01060 endonuclease IV; Prov 20.2 4.8E+02 0.01 29.5 9.4 84 218-301 13-111 (281)
205 PRK09856 fructoselysine 3-epim 20.2 3.3E+02 0.0071 30.6 8.0 76 217-299 90-179 (275)
No 1
>KOG2230|consensus
Probab=100.00 E-value=6e-93 Score=797.89 Aligned_cols=466 Identities=41% Similarity=0.726 Sum_probs=411.5
Q ss_pred CcccCCCCCCCCCCCCCCCCCccccchhhhhcccccccccCCccEEEEEEccceEeeeEEEEEeeCCcceEEEEEEEEEE
Q psy15568 1 MLRKMQASFAWDWGPAMPSVGICDIYHIIIENESKQNLELGEKSVELEGYHVARIRDILTDITYHEDLKSWHLSVRVILE 80 (1231)
Q Consensus 1 ~~Rk~q~~~gWDWgp~~~~~GIw~~~~~~~~~~~~~~~~~~~r~V~L~~~~~~~I~~~~v~~~~~~~~~~~~v~v~v~l~ 80 (1231)
||||+||||.|||||.+|++||| .+|+|+++...++.++.+.+..+. +.+.+.++.++.
T Consensus 179 fiRK~Q~SFsWDWGPsfPt~GI~-------------------k~v~i~iY~~~~~~~f~~~~~~~~--g~w~~~~eftf~ 237 (867)
T KOG2230|consen 179 FIRKAQYSFAWDWGPSFPTVGIP-------------------STITINIYRGQYFHDFNWKTRFAH--GKWKVAFEFTFH 237 (867)
T ss_pred HHHHhhcceecccCCCCccCCCC-------------------cceEEEEEeeeEEEeeceeeeeec--ceeeEEEEEecc
Confidence 79999999999999999999999 999999999999999999998874 378888888665
Q ss_pred eccccceeEEEEEEEEEeCCcceEEeeeeeeecCCCceEEEEEEEecCCCcccCCCCCCCCCCcEEEEEEEEeCcEEEEE
Q psy15568 81 AGLSQAVVKAKLTAELAVGKKPLRVDSLVNAEPSHGEIEVVSTLMVLASEVELWWPNGYGEQPLYNLQITLASGVEMSTK 160 (1231)
Q Consensus 81 n~~~~~~~~~~l~~~i~~~~~~~~~~~~~~v~~~~g~~~~~~~~~i~~~~p~LWwP~g~G~P~LY~l~v~l~~g~~~D~~ 160 (1231)
.. . .++...+.+ +..+.+..+. +.+.++++.+.+...+. .+|.-|||+|+|++.||.+++.. |+.. .
T Consensus 238 ~~-~---~~i~~~v~i-p~l~~~~~Y~---i~Lq~~k~i~~l~i~~~-~~~e~wwp~g~g~q~~y~~~v~~--gg~~--~ 304 (867)
T KOG2230|consen 238 YG-A---RTIEYSVQI-PELGIKESYR---LSLQTSKNIMSLSIPME-HEPERWWPNGMGEQKLYDVVVSM--GGQV--K 304 (867)
T ss_pred cc-c---cccceEEEE-ecccceEEEE---EEeccccceeeeccccc-ccccccCCCCCCcceeEEEEEec--Ccee--e
Confidence 54 2 234444445 5445444443 68888777777666663 68899999999999999998876 5443 3
Q ss_pred EEeEEEEEEEEeecCCCCccccCCcEEEEEECCeeEEEecceecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEEccCCC
Q psy15568 161 SIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGG 240 (1231)
Q Consensus 161 ~~~fGfR~ve~~~~~~~~~~~~~G~~f~f~lNG~pvflrG~n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~wggg 240 (1231)
++++|||++|+.+++..+ +.|++|||++||.|+|+||+||+|.++|..|.+. +..+.+|+.++|+||||||+||||
T Consensus 305 ekki~frtvelv~~p~kp---~~g~nfyfkin~~pvflkg~nwip~s~f~dr~t~-~~~~~LL~Sv~e~~MN~lRVWGGG 380 (867)
T KOG2230|consen 305 EKKIGFKTVELVQDPKKP---EKGRNFYFKINDEPVFLKGTNWIPVSMFRDRENI-AKTEFLLDSVAEVGMNMLRVWGGG 380 (867)
T ss_pred eeeeeeEEEEEeecCCCC---CCCceeEEEEcCcEEEeecCCccChHHHHhhHHH-HHHHHHHHHHHHhCcceEEEecCc
Confidence 459999999999988766 6899999999999999999999999999988887 999999999999999999999999
Q ss_pred CCChHHHHHHHhHcCCEEEEecccccCCCCCCHHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc-------------
Q psy15568 241 VYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA------------- 307 (1231)
Q Consensus 241 ~~~~~~fydlcDe~GIlVw~e~~~~~~~~~~~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~------------- 307 (1231)
.||+|+||++||++||||||||||+|+.||.+++|+.++++|++.++.|+.+||||++|+++||++.
T Consensus 381 vYEsd~FY~lad~lGilVWQD~MFACAlYPt~~eFl~sv~eEV~yn~~Rls~HpSviIfsgNNENEaAl~~nWy~~sf~~ 460 (867)
T KOG2230|consen 381 VYESDYFYQLADSLGILVWQDMMFACALYPTNDEFLSSVREEVRYNAMRLSHHPSVIIFSGNNENEAALVQNWYGTSFER 460 (867)
T ss_pred cccchhHHHHhhhccceehhhhHHHhhcccCcHHHHHHHHHHHHHHHHhhccCCeEEEEeCCCccHHHHHhhhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred ----------------------------------------------------------CCccccCCCCCCCCCCCCcccc
Q psy15568 308 ----------------------------------------------------------HNYDYYQNLWDPSTAPKSRFCS 329 (1231)
Q Consensus 308 ----------------------------------------------------------h~y~~~~~~~~~~~~~~~~f~s 329 (1231)
|||+|..++|++..||+|||+|
T Consensus 461 ~~~~~kdyvlly~~~i~el~l~~~~srPfi~SSPsNG~ete~e~~VS~NP~dn~~GDVHfYdy~~d~W~~~ifp~pRfaS 540 (867)
T KOG2230|consen 461 DRFESKDYVLLYANVIHELKLVSHSSRPFIVSSPSNGKETEPENYVSSNPQDNQNGDVHFYDYTKDGWDPGIFPRPRFAS 540 (867)
T ss_pred cchhhhhhhHHHHHHHHHHHhhcCCCCCceecCCCCCcccCccccccCCCccccCCceEeeehhhccCCCCcccCchhhh
Confidence 8999999999999999999999
Q ss_pred cCCCCCCCChhHHhhccCccccCCCCCcccccccccCCCcchhHhhHhhhccCCchhhhhhhhhhhhHHHHhhhcccccc
Q psy15568 330 EFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYFAYLSQCMAAIHALHGRYAT 409 (1231)
Q Consensus 330 E~G~~s~P~~~tl~~~~~~~d~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~~~~~~~~~~~~~~r~~~ 409 (1231)
|||+||+|..++|++...++|| .++|.++.|||||++|+..++-++.+|+++|.+..+..
T Consensus 541 EyG~QS~P~~~t~~~~~~e~Dw-~~~sk~~~HRQHHpgGn~~~l~~v~~HlplP~s~~~~~------------------- 600 (867)
T KOG2230|consen 541 EYGFQSFPGAYTWQRSKGEDDW-LLGSKLITHRQHHPGGNVPVLALVERHLPLPFSENENY------------------- 600 (867)
T ss_pred hcCcccCccHHHHHhccCccch-hhccceeeeeccCCCCcchHHHHHHhcCCCCCCCCccc-------------------
Confidence 9999999999999999999999 99999999999999999999999999999994321111
Q ss_pred cccchHHHHHHhhhccccccccCCCCCchhhHHHHHhHHHHHHHHHHHHHHHHhcccccccCCCccceeeeeehhcCccC
Q psy15568 410 DQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDVWQ 489 (1231)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sQ~~Qa~~~k~~~E~~rr~~~~~~~~~~~~~~G~l~WqlnD~wP 489 (1231)
-++. -+|+||++||+|+|+++|.|||.|... .+..+++||++||||||+|.
T Consensus 601 --------------~~k~--------------i~YfsQV~Qa~a~KteTe~YRr~R~t~-~~~~g~tMgAlYWQLNDvW~ 651 (867)
T KOG2230|consen 601 --------------ATKL--------------IAYFSQVAQAMATKTETELYRRLRDTP-HRTLGNTMGALYWQLNDVWV 651 (867)
T ss_pred --------------hhHH--------------HHHHHHHHHHHHHHHHHHHHHHhccCc-hhhhccchheeeeeeccEEe
Confidence 0022 569999999999999999999998754 23456789999999999999
Q ss_pred CCCcceeecCCCcchhHHHHHHhcCCceeeeEeecCCCeEEEEEEeCCCCCccceEEEEEEEEecCC
Q psy15568 490 APTWSSIDYDGNWKMLHYFARKFFAPVLISPVLNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWNDT 556 (1231)
Q Consensus 490 ~~~W~~iDy~~~pK~~~y~~k~~~~Pv~v~~~~~~~~~~leV~vvNDa~~~~~~~~v~v~~~~~~~~ 556 (1231)
+++|++|||+|+||+.||.++|||+||++..+.+ +....|+++||..... +.+|.+....|+..
T Consensus 652 APsWssidf~gnWKm~hyea~~ffan~~~~~f~~--e~~f~v~~~~d~~~l~-s~tl~vq~~sW~~~ 715 (867)
T KOG2230|consen 652 APSWSSIDFYGNWKMDHYEANRFFANVAVYSFAD--ETDFKVFLLNDPVHLW-SQTLPVQSTSWDVT 715 (867)
T ss_pred cCcceeeeccCcccccHHHHHhhhcccccccccc--ccceEEEecCchhhhh-heeeeeEEeecccc
Confidence 9999999999999999999999999999988887 6778999999955444 77899999999874
No 2
>COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-55 Score=544.62 Aligned_cols=401 Identities=26% Similarity=0.363 Sum_probs=306.3
Q ss_pred ccEEEEEEccceEeeeEEEEEeeCCcceEEEEEEEEEEeccccceeEEEEEEEEEeCCcceEEeeeeeeecCCCceEEEE
Q psy15568 43 KSVELEGYHVARIRDILTDITYHEDLKSWHLSVRVILEAGLSQAVVKAKLTAELAVGKKPLRVDSLVNAEPSHGEIEVVS 122 (1231)
Q Consensus 43 r~V~L~~~~~~~I~~~~v~~~~~~~~~~~~v~v~v~l~n~~~~~~~~~~l~~~i~~~~~~~~~~~~~~v~~~~g~~~~~~ 122 (1231)
|+|+|+.+|.++|.+++|.+........+.+. +.+.+.... ...+++++.+.++...... +...+++..+.+
T Consensus 172 RdV~l~i~p~~~~~di~V~t~~~~~~~~~~~~--~~~~~~~~~---~~~ls~~L~~~~~~v~~~~---~~~~~~~~~~~~ 243 (808)
T COG3250 172 RDVMLYITPNTHVDDITVVTHLAEDCNHASLD--VKIQQVVAN---GLDLSVELRDAEQQVVATG---QERGTGQGAAAG 243 (808)
T ss_pred ceeEEEEccceeEeeeEEEEecchhhhhhhee--eheeeeccc---CceEEEEEEcCCCceeeee---eccccCCcceeE
Confidence 99999999999999999999888765555555 333333221 1467788876655433221 114566677777
Q ss_pred EEEecCCCcccCCCCCCCCCCcEEEEEEEEe-CcEEEEEEEeEEEEEEEEeecCCCCccccCCcEEEEEECCeeEEEecc
Q psy15568 123 TLMVLASEVELWWPNGYGEQPLYNLQITLAS-GVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGS 201 (1231)
Q Consensus 123 ~~~i~~~~p~LWwP~g~G~P~LY~l~v~l~~-g~~~D~~~~~fGfR~ve~~~~~~~~~~~~~G~~f~f~lNG~pvflrG~ 201 (1231)
.+.| ++|+||||+ +|+||++.++|.+ |..+|....+||||+|+++. |. |+|||+|||+||+
T Consensus 244 ~~~V--~~p~lWsp~---~P~LY~l~~~L~~~~~~~d~~~~~iGfR~iei~~----------~~---~~iNGkpvf~kGv 305 (808)
T COG3250 244 ELKV--ENPKLWSPE---DPYLYRLVVTLKDANTLIDAEALRIGFRTVEIKD----------GL---LLINGKPVFIRGV 305 (808)
T ss_pred EEec--cCcccCCCC---CCceEEEEEEEEeCCceeeEEEeeeccEEEEEEC----------Ce---EEECCeEEEEeee
Confidence 7877 899999999 9999999999999 68899999999999999954 32 9999999999999
Q ss_pred eecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEEccCCCCCC-hHHHHHHHhHcCCEEEEecccccCCCCCCHHHHHHHH
Q psy15568 202 NLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYM-SDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVR 280 (1231)
Q Consensus 202 n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~wggg~~~-~~~fydlcDe~GIlVw~e~~~~~~~~~~~~~~~~~~~ 280 (1231)
|||++++..|+.+.++.++++|++||++||||||+| ||| +++||+||||+|||||+|+|++|..++.+++|.+.+.
T Consensus 306 nrHe~~~~~G~~~~~~~~~~dl~lmk~~n~N~vRts---HyP~~~~~ydLcDelGllV~~Ea~~~~~~~~~~~~~~k~~~ 382 (808)
T COG3250 306 NRHEDDPILGRVTDEDAMERDLKLMKEANMNSVRTS---HYPNSEEFYDLCDELGLLVIDEAMIETHGMPDDPEWRKEVS 382 (808)
T ss_pred ecccCCCccccccCHHHHHHHHHHHHHcCCCEEEec---CCCCCHHHHHHHHHhCcEEEEecchhhcCCCCCcchhHHHH
Confidence 999999999999997779999999999999999996 665 6799999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCceeEEeccccCCcc--------------------CCcccc---------------------------
Q psy15568 281 SEISQTVRRVQHHPCIAVWAGNNEMEA--------------------HNYDYY--------------------------- 313 (1231)
Q Consensus 281 ~e~~~~i~r~rnHPSii~W~~~NE~~~--------------------h~y~~~--------------------------- 313 (1231)
+|+++||+|++|||||+|||+|||... +|-+.-
T Consensus 383 ~~i~~mver~knHPSIiiWs~gNE~~~g~~~~~~~~~~k~~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~ 462 (808)
T COG3250 383 EEVRRMVERDRNHPSIIIWSLGNESGHGSNHWALYRWFKASDPTRPVQYEGRGTEATDILSPMYERVDEILYFPGSPRPL 462 (808)
T ss_pred HHHHHHHHhccCCCcEEEEeccccccCccccHHHHHHHhhcCCccceeccCccceeeecccchhhcCccccccCCCCCCc
Confidence 999999999999999999999999542 000000
Q ss_pred ----------------CCCCC-CCCC-----------CCCcccc--cCCCCCCCChhHHhhccCccccCCCCCccccccc
Q psy15568 314 ----------------QNLWD-PSTA-----------PKSRFCS--EFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQ 363 (1231)
Q Consensus 314 ----------------~~~~~-~~~~-----------~~~~f~s--E~G~~s~P~~~tl~~~~~~~d~~~~~s~~~~~~~ 363 (1231)
...|. +..+ -.+++.+ |+|++++|....+..+....+. .+++.++.-|+
T Consensus 463 ~l~~~~~~~~n~~~G~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~e~g~~~~~~~g~~~~~~~~~~~-~~~~~v~~~~~ 541 (808)
T COG3250 463 ILCEYAHAMGNSYGGDYHYWGVFGEYPRLQGGFIWDWVDQRLIPIDETGNQAYAYGGDFGDYPNDRSF-ELNGLVFPDRQ 541 (808)
T ss_pred eeecchHhhccCcCCceeeeehhccccccccceehhhcccccCcccccCccccccccccCCCccccch-hcccccccccc
Confidence 00010 0001 1245555 7777776666666654444444 55666666665
Q ss_pred ccCCCcchhHhhHhhhccCCchhhhhhhhhhhhHHHHhhhcccccccccchHHHHHHhhhccccccccCCCCCchhhHHH
Q psy15568 364 HLAGGTGILESSVGHQFEIGNLTLEYFAYLSQCMAAIHALHGRYATDQAGAIKTITEQMRRDKGVLREDGSGHNMGALYW 443 (1231)
Q Consensus 364 ~~~~g~~~~~~~~~~~~~~~~~~~~~F~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1231)
.+++++..+..+.-.+|..+ ++ .+.|+
T Consensus 542 ~~~~~~e~~~~~~~~~f~~~------------------------------------------k~-----------~~~~~ 568 (808)
T COG3250 542 PNPGLKEAKVGTQFWAFGDP------------------------------------------KT-----------FQGFL 568 (808)
T ss_pred cCccchheeEEEeeeeeecc------------------------------------------cc-----------CCceE
Confidence 55544443322111111111 11 11278
Q ss_pred HHhHHHHHHHHHHHHHHHHhcccccccCCCccceeeeeehhcCccCCCCcceeecCCCcchhHHHHHHhcCCceeeeEee
Q psy15568 444 QLNDIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDVWQAPTWSSIDYDGNWKMLHYFARKFFAPVLISPVLN 523 (1231)
Q Consensus 444 ~~sQ~~Qa~~~k~~~E~~rr~~~~~~~~~~~~~~G~l~WqlnD~wP~~~W~~iDy~~~pK~~~y~~k~~~~Pv~v~~~~~ 523 (1231)
+.+|.+|+++.+.....+|+... .|+|.++|+|||.||+.+|+++||.++||+ ||..+|+++|+.+.....
T Consensus 569 ~~s~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~pg~~~~~~~~~~~~k~-~~l~~r~~~~~~~~~~~~ 639 (808)
T COG3250 569 VTSENLFAEADRERLPKLRALLG--------ETLGSLEWQLNDVPPGASWSSLDEALRPKA-LYLTRRFTQPELTAWSEA 639 (808)
T ss_pred Eechhheeeeehhhhhhhhhccc--------eEeeeEEEEeecCCCcccccccccccCCcc-eEEEEEEeccccchhhhh
Confidence 99999999999999999999865 699999999999999999999999999999 999999999999887554
Q ss_pred cCCCeEEEEEEe
Q psy15568 524 VSSRTLEVVLLN 535 (1231)
Q Consensus 524 ~~~~~leV~vvN 535 (1231)
.......+-..+
T Consensus 640 ~~~~~~~l~~~~ 651 (808)
T COG3250 640 AADGQFTLSEVS 651 (808)
T ss_pred cccceeeecccc
Confidence 223334444444
No 3
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=100.00 E-value=7.4e-48 Score=424.66 Aligned_cols=233 Identities=35% Similarity=0.567 Sum_probs=206.8
Q ss_pred eeecCCCeEEEEEEecCCCC--ceeEEEEEEEEecCCC----CCccccCcC-------------eEEeeccccccccCcc
Q psy15568 923 VFNVSSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDT----RPFRSVKTP-------------LVTVKLCAAEEIQGFF 983 (1231)
Q Consensus 923 ~~~~~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~----~p~~~~~~~-------------~it~dlhss~~i~~ff 983 (1231)
..+.|++.|||+++.|++++ +++|++++|||+|+|+ ++|++++.+ ++|+||| ++|+||||
T Consensus 61 ~~pvnd~lmELLi~idA~k~asA~~It~ViPY~gYARQDk~~~~repIsaklvA~lL~~aG~drv~TvDlH-~~qiqgfF 139 (314)
T COG0462 61 SPPVNDNLMELLIMIDALKRASAKRITAVIPYFGYARQDKAFKPREPISAKLVANLLETAGADRVLTVDLH-APQIQGFF 139 (314)
T ss_pred CCCcCHHHHHHHHHHHHHHhcCCceEEEEeecchhhccCcccCCCCCEeHHHHHHHHHHcCCCeEEEEcCC-chhhcccC
Confidence 34578899999999999998 7999999999777763 566776644 4999999 69999999
Q ss_pred ccccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCC
Q psy15568 984 DCPVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSI 1062 (1231)
Q Consensus 984 ~ip~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1231)
++|+++|++.|++.+|+..+...+ ++.+++||.|++. |+.+++.
T Consensus 140 dipvdnl~a~p~l~~~~~~~~~~~-----------d~vVVSPD~Ggv~RAr~~A~~------------------------ 184 (314)
T COG0462 140 DIPVDNLYAAPLLAEYIREKYDLD-----------DPVVVSPDKGGVKRARALADR------------------------ 184 (314)
T ss_pred CCccccccchHHHHHHHHHhcCCC-----------CcEEECCCccHHHHHHHHHHH------------------------
Confidence 999999999999999997664222 3569999999988 8888774
Q ss_pred CCCCCCcccccccccccccccCC-CCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccCcHHHHH
Q psy15568 1063 APPSSPAVDLVTKTMPSVDGRAS-PPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFV 1141 (1231)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~~k~r~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~ 1141 (1231)
++++.++++|+|. . .++.+.+.++|||+||+|||||||||||+||+
T Consensus 185 ----------L~~~~a~i~K~R~~~-----------------------~~~v~~~~~~gdV~gk~~iiVDDiIdTgGTi~ 231 (314)
T COG0462 185 ----------LGAPLAIIDKRRDSS-----------------------PNVVEVMNLIGDVEGKDVVIVDDIIDTGGTIA 231 (314)
T ss_pred ----------hCCCEEEEEEeecCC-----------------------CCeEEEeecccccCCCEEEEEeccccccHHHH
Confidence 2345688899885 3 47788899999999999999999999999999
Q ss_pred HHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCCCCcc
Q psy15568 1142 AAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMS 1221 (1231)
Q Consensus 1142 ~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~~s~~ 1221 (1231)
+|++.|+++||++|+++||||+|++.|.++++++.+++|++|||||++ +.+.++|++++|+|++|||+|+|+|+++|||
T Consensus 232 ~Aa~~Lk~~GAk~V~a~~tH~vfs~~a~~~l~~~~i~~vivTnTi~~~-~~~~~~~~~~isva~liaeaI~ri~~~~svs 310 (314)
T COG0462 232 KAAKALKERGAKKVYAAATHGVFSGAALERLEASAIDEVIVTDTIPLP-EKKKIPKVSVISVAPLIAEAIRRIHNGESVS 310 (314)
T ss_pred HHHHHHHHCCCCeEEEEEEchhhChHHHHHHhcCCCCEEEEeCCcccc-cccccCceEEEEhHHHHHHHHHHHHcCCChh
Confidence 999999999999999999999999999999998889999999999998 6677889999999999999999999999999
Q ss_pred cccc
Q psy15568 1222 YLFR 1225 (1231)
Q Consensus 1222 ~l~~ 1225 (1231)
.||+
T Consensus 311 ~lf~ 314 (314)
T COG0462 311 SLFD 314 (314)
T ss_pred HhhC
Confidence 9995
No 4
>PRK10150 beta-D-glucuronidase; Provisional
Probab=100.00 E-value=8.9e-45 Score=452.97 Aligned_cols=245 Identities=23% Similarity=0.294 Sum_probs=197.7
Q ss_pred cccCCCCCCCCCCCCCCCCCccccchhhhhcccccccccCCccEEEEEEccceEeeeEEEEEeeCCcceEEEEEEEEEEe
Q psy15568 2 LRKMQASFAWDWGPAMPSVGICDIYHIIIENESKQNLELGEKSVELEGYHVARIRDILTDITYHEDLKSWHLSVRVILEA 81 (1231)
Q Consensus 2 ~Rk~q~~~gWDWgp~~~~~GIw~~~~~~~~~~~~~~~~~~~r~V~L~~~~~~~I~~~~v~~~~~~~~~~~~v~v~v~l~n 81 (1231)
+||+|++++| ++.+||| |+|+|+++++++|++++|.|.++.+...++|+|++.+.+
T Consensus 155 ~~k~~~~~d~-----~~~~GI~-------------------r~V~L~~~~~~~i~dv~v~~~~~~~~~~a~v~v~v~~~~ 210 (604)
T PRK10150 155 KKKQKYNFDF-----FNYAGIH-------------------RPVMLYTTPKTHIDDITVVTELAQDLNHASVDWSVETNG 210 (604)
T ss_pred cccccccccc-----ccccCCC-------------------ceEEEEEcCCccCceEEEEeecCCcCceEEEEEEEEEcC
Confidence 5788876655 4568999 999999999999999999998765445677777777644
Q ss_pred ccccceeEEEEEEEEEeCCcceEEeeeeeeecCCCceEEEEEEEecCCCcccCCCCCCCCCCcEEEEEEEEe-CcEEEEE
Q psy15568 82 GLSQAVVKAKLTAELAVGKKPLRVDSLVNAEPSHGEIEVVSTLMVLASEVELWWPNGYGEQPLYNLQITLAS-GVEMSTK 160 (1231)
Q Consensus 82 ~~~~~~~~~~l~~~i~~~~~~~~~~~~~~v~~~~g~~~~~~~~~i~~~~p~LWwP~g~G~P~LY~l~v~l~~-g~~~D~~ 160 (1231)
.. ..+++++.+..+... ... .+ ....+.| ++|+||||. +|+||+|+++|.. |+.+|+.
T Consensus 211 ~~------~~~~~~l~~~~g~~v-~~~------~~---~~~~~~i--~~p~lW~p~---~P~LY~l~v~l~~~g~~~d~~ 269 (604)
T PRK10150 211 DV------DSVSVTLRDADGQVV-ATG------QG---TSGTLQV--VNPHLWQPG---EGYLYTLCVELAKSGTECDTY 269 (604)
T ss_pred Cc------eEEEEEEECCCCCEE-Eec------cc---cceEEEc--CCCcccCCC---CCceEEEEEEEeeCCeeEEEE
Confidence 21 346666655443222 110 11 2234555 899999995 9999999999987 7889999
Q ss_pred EEeEEEEEEEEeecCCCCccccCCcEEEEEECCeeEEEecceecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEEccCCC
Q psy15568 161 SIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGG 240 (1231)
Q Consensus 161 ~~~fGfR~ve~~~~~~~~~~~~~G~~f~f~lNG~pvflrG~n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~wggg 240 (1231)
+.+||||+|+++. + . |+|||+||||||+|+|++....|++.+++.++++|++||++|+|+||+ +
T Consensus 270 ~~~~GfR~i~~~~----------~-~--f~lNG~pv~lrG~~~h~~~~~~G~a~~~~~~~~d~~l~K~~G~N~vR~---s 333 (604)
T PRK10150 270 PLRFGIRSVAVKG----------G-Q--FLINGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRT---S 333 (604)
T ss_pred EeeeEEEEEEEeC----------C-E--EEECCEEEEEEeeeccCCCCccCCcCCHHHHHHHHHHHHHCCCCEEEe---c
Confidence 9999999999842 2 2 999999999999999999999999888899999999999999999999 6
Q ss_pred CCC-hHHHHHHHhHcCCEEEEecccccCC-------------CC------CCHHHHHHHHHHHHHHHHHhCCCceeEEec
Q psy15568 241 VYM-SDYFYETCDELGILIWQDMMFACNN-------------YP------ATPTFLQSVRSEISQTVRRVQHHPCIAVWA 300 (1231)
Q Consensus 241 ~~~-~~~fydlcDe~GIlVw~e~~~~~~~-------------~~------~~~~~~~~~~~e~~~~i~r~rnHPSii~W~ 300 (1231)
||| +++|||+|||+|||||+|+|.+... .+ .++++.+..++++++||+|+||||||++||
T Consensus 334 h~p~~~~~~~~cD~~GllV~~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mv~r~~NHPSIi~Ws 413 (604)
T PRK10150 334 HYPYSEEMLDLADRHGIVVIDETPAVGLNLSFGAGLEAGNKPKETYSEEAVNGETQQAHLQAIRELIARDKNHPSVVMWS 413 (604)
T ss_pred cCCCCHHHHHHHHhcCcEEEEecccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHhccCCceEEEEe
Confidence 898 5799999999999999999853210 00 125678888999999999999999999999
Q ss_pred cccCCcc
Q psy15568 301 GNNEMEA 307 (1231)
Q Consensus 301 ~~NE~~~ 307 (1231)
++||...
T Consensus 414 ~gNE~~~ 420 (604)
T PRK10150 414 IANEPAS 420 (604)
T ss_pred eccCCCc
Confidence 9999854
No 5
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed
Probab=100.00 E-value=4.2e-43 Score=454.43 Aligned_cols=242 Identities=22% Similarity=0.346 Sum_probs=199.7
Q ss_pred ccEEEEEEccceEeeeEEEEEeeCCcceEEEEEEEEEEeccccceeEEEEEEEEEeCCcceEEeeeeeeecCCCceEEEE
Q psy15568 43 KSVELEGYHVARIRDILTDITYHEDLKSWHLSVRVILEAGLSQAVVKAKLTAELAVGKKPLRVDSLVNAEPSHGEIEVVS 122 (1231)
Q Consensus 43 r~V~L~~~~~~~I~~~~v~~~~~~~~~~~~v~v~v~l~n~~~~~~~~~~l~~~i~~~~~~~~~~~~~~v~~~~g~~~~~~ 122 (1231)
|+|+|+++|+++|.+++|.+.++.+...++|.|++.+.|.+... ...++++.+.++++.........+.+. +...+++
T Consensus 199 R~V~L~~~p~~~I~d~~v~t~l~~~~~~a~l~v~v~~~n~~~~~-~~~~v~~~l~d~~~~v~~~~~~~~~~~-~~~~~~~ 276 (1021)
T PRK10340 199 RDVYLVGKPLTHINDFTVRTDFDEDYCDATLSCEVVLENLAASP-VVTTLEYTLFDGERVVHSSAIDHLAIE-KLTSASF 276 (1021)
T ss_pred ceEEEEEeCCceEEeeEEEeeccCccCceEEEEEEEEecCCCCc-cceEEEEEEECCCceEEEEeeceeecC-CCceEEE
Confidence 99999999999999999999887655678899999998866543 345777888665432221111012222 2234555
Q ss_pred EEEecCCCcccCCCCCCCCCCcEEEEEEEEe--CcEEEEEEEeEEEEEEEEeecCCCCccccCCcEEEEEECCeeEEEec
Q psy15568 123 TLMVLASEVELWWPNGYGEQPLYNLQITLAS--GVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKG 200 (1231)
Q Consensus 123 ~~~i~~~~p~LWwP~g~G~P~LY~l~v~l~~--g~~~D~~~~~fGfR~ve~~~~~~~~~~~~~G~~f~f~lNG~pvflrG 200 (1231)
++.| ++|+||||+ +|+||+|+++|.+ |+++|..+.+||||+|+++ .|. |+|||+||+|||
T Consensus 277 ~~~i--~~p~lWs~e---~P~LY~l~v~l~~~~g~~~d~~~~~~GfR~iei~----------~~~---f~lNGkpi~lrG 338 (1021)
T PRK10340 277 AFTV--EQPQQWSAE---SPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVR----------DGL---FWINNRYVKLHG 338 (1021)
T ss_pred EEEc--CCCCcCCCC---CCeeEEEEEEEEcCCCCEEEEEEeeeEEEEEEEE----------CCE---EEECCEEEEEEE
Confidence 5665 899999997 9999999999985 7889999999999999984 232 999999999999
Q ss_pred ceecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEEccCCCCCCh-HHHHHHHhHcCCEEEEecccccCCC---------C
Q psy15568 201 SNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMS-DYFYETCDELGILIWQDMMFACNNY---------P 270 (1231)
Q Consensus 201 ~n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~wggg~~~~-~~fydlcDe~GIlVw~e~~~~~~~~---------~ 270 (1231)
+|+|+.++..|++.+++.++++|++||++|+|+||+ +|||+ ++|||+|||+|||||+|+++.|..+ .
T Consensus 339 vnrh~~~p~~G~a~~~e~~~~dl~lmK~~g~NavR~---sHyP~~~~fydlcDe~GllV~dE~~~e~~g~~~~~~~~~~~ 415 (1021)
T PRK10340 339 VNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRT---AHYPNDPRFYELCDIYGLFVMAETDVESHGFANVGDISRIT 415 (1021)
T ss_pred eecCCCCcccCccCCHHHHHHHHHHHHHCCCCEEEe---cCCCCCHHHHHHHHHCCCEEEECCcccccCccccccccccc
Confidence 999999999999888899999999999999999999 58986 6999999999999999998776543 2
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 271 ATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 271 ~~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
+++.|.+.+.+++++||+|+||||||++||+|||...
T Consensus 416 ~~p~~~~~~~~~~~~mV~RdrNHPSIi~WslGNE~~~ 452 (1021)
T PRK10340 416 DDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGY 452 (1021)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCEEEEEECccCccc
Confidence 4678889999999999999999999999999999843
No 6
>PRK09525 lacZ beta-D-galactosidase; Reviewed
Probab=100.00 E-value=4.5e-41 Score=434.36 Aligned_cols=241 Identities=22% Similarity=0.381 Sum_probs=196.1
Q ss_pred ccEEEEEEccceEeeeEEEEEeeCCcceEEEEEEEEEEeccccceeEEEEEEEEEeCCcceEEeeee--e-eecCCCc--
Q psy15568 43 KSVELEGYHVARIRDILTDITYHEDLKSWHLSVRVILEAGLSQAVVKAKLTAELAVGKKPLRVDSLV--N-AEPSHGE-- 117 (1231)
Q Consensus 43 r~V~L~~~~~~~I~~~~v~~~~~~~~~~~~v~v~v~l~n~~~~~~~~~~l~~~i~~~~~~~~~~~~~--~-v~~~~g~-- 117 (1231)
|+|+|+++|+++|.+++|.+.++.+.+.++|++++.+.+... ...++++++.+.++........ . ....++.
T Consensus 211 R~V~L~~~p~~~I~d~~v~t~l~~~~~~a~v~v~v~~~~~~~---~~~~v~~~l~d~~~~v~~~~~~~~~~~~~~~~~~~ 287 (1027)
T PRK09525 211 RDVSLLHKPTTQLSDFHITTELDDDFRRAVLEVEAQVNGELR---DELRVTVQLWDGETLVASGTAPFGTEIIDERGAYA 287 (1027)
T ss_pred ceEEEEEcCCcEEeeeEEEeeccCccceEEEEEEEEEecCCC---CcEEEEEEEEcCCCcEEEEeecccceeeecccccc
Confidence 999999999999999999998876556788888888865433 2356777776655432221100 0 1112222
Q ss_pred eEEEEEEEecCCCcccCCCCCCCCCCcEEEEEEEEe--CcEEEEEEEeEEEEEEEEeecCCCCccccCCcEEEEEECCee
Q psy15568 118 IEVVSTLMVLASEVELWWPNGYGEQPLYNLQITLAS--GVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVP 195 (1231)
Q Consensus 118 ~~~~~~~~i~~~~p~LWwP~g~G~P~LY~l~v~l~~--g~~~D~~~~~fGfR~ve~~~~~~~~~~~~~G~~f~f~lNG~p 195 (1231)
..+++++.| ++|+||||+ +|+||+|+++|.. |+++|..+.+||||+|+++ .|. |+|||+|
T Consensus 288 ~~~~~~~~v--~~p~lWs~e---~P~LY~l~v~l~~~~g~v~d~~~~~~GfR~iei~----------~~~---f~LNGkp 349 (1027)
T PRK09525 288 DRVTLRLNV--ENPKLWSAE---TPNLYRAVVSLLDADGTLIEAEAYDVGFRKVEIE----------NGL---LKLNGKP 349 (1027)
T ss_pred ceEEEEEEc--CCCCcCCCC---CCeeEEEEEEEEeCCCcEEEEEEeeEEEEEEEEE----------CCE---EEECCEE
Confidence 234444555 899999997 9999999999976 6788999999999999994 243 9999999
Q ss_pred EEEecceecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEEccCCCCCCh-HHHHHHHhHcCCEEEEecccccCC------
Q psy15568 196 IYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMS-DYFYETCDELGILIWQDMMFACNN------ 268 (1231)
Q Consensus 196 vflrG~n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~wggg~~~~-~~fydlcDe~GIlVw~e~~~~~~~------ 268 (1231)
|+|||+|+|+.++..|++.+++.++++|++||++|+|+||+ +|||+ ++||++|||+|||||+|+++.+..
T Consensus 350 i~lrGvn~h~~~p~~G~a~t~e~~~~di~lmK~~g~NaVR~---sHyP~~p~fydlcDe~GilV~dE~~~e~hg~~~~~~ 426 (1027)
T PRK09525 350 LLIRGVNRHEHHPEHGQVMDEETMVQDILLMKQHNFNAVRC---SHYPNHPLWYELCDRYGLYVVDEANIETHGMVPMNR 426 (1027)
T ss_pred EEEEEeEccccCcccCccCCHHHHHHHHHHHHHCCCCEEEe---cCCCCCHHHHHHHHHcCCEEEEecCccccCCccccC
Confidence 99999999999999998888899999999999999999999 58985 699999999999999999874322
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 269 YPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 269 ~~~~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
...+++|.+.+.+++++||+|+||||||++||+|||...
T Consensus 427 ~~~dp~~~~~~~~~~~~mV~RdrNHPSIi~WSlgNE~~~ 465 (1027)
T PRK09525 427 LSDDPRWLPAMSERVTRMVQRDRNHPSIIIWSLGNESGH 465 (1027)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCCCEEEEEeCccCCCc
Confidence 234688999999999999999999999999999999854
No 7
>KOG1503|consensus
Probab=100.00 E-value=2.5e-41 Score=347.30 Aligned_cols=118 Identities=84% Similarity=1.278 Sum_probs=114.4
Q ss_pred CCceeccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccc
Q psy15568 1114 PPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKL 1193 (1231)
Q Consensus 1114 ~~~~~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~ 1193 (1231)
..+.++|||.||..|+||||||.-.++.+||+.||+.||-+|++++|||++|.+|...|++|+|+++++|||||+.-++.
T Consensus 237 ppltvvgdvggriaimvddiiddvqsfvaaae~lkergaykiyv~athgllssdapr~lees~idevvvtntvphevqkl 316 (354)
T KOG1503|consen 237 PPLTVVGDVGGRIAIMVDDIIDDVQSFVAAAEVLKERGAYKIYVMATHGLLSSDAPRLLEESPIDEVVVTNTVPHEVQKL 316 (354)
T ss_pred CCeEEEeccCceEEEEehhhHHhHHHHHHHHHHHHhcCceEEEEEeecccccccchhhhhcCCCceEEEecCCcHHHHhh
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred cCCCeEEEechHHHHHHHHHHhCCCCccccccCCCCCC
Q psy15568 1194 QCPKIKTVDISILLSEAIRRMHNKESMSYLFRNVTLED 1231 (1231)
Q Consensus 1194 ~~~~~~~~~~a~l~a~~i~~~~~~~s~~~l~~~~~~~~ 1231 (1231)
+|+||+.+|++-+++|+|+|||++||.+.||.++|++|
T Consensus 317 qc~kiktvdislii~eairrihn~esm~ylfrnvtldd 354 (354)
T KOG1503|consen 317 QCHKIKTVDISLIISEAIRRIHNGESMSYLFRNVTLDD 354 (354)
T ss_pred cCCccceeehhhHHHHHHHHHhCCchHHHHHhhCccCC
Confidence 99999999999999999999999999999999999987
No 8
>KOG1448|consensus
Probab=100.00 E-value=6.3e-42 Score=366.78 Aligned_cols=131 Identities=42% Similarity=0.717 Sum_probs=120.8
Q ss_pred CCeEEEEEEeCCCCC--ccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEecc
Q psy15568 526 SRTLEVVLLNDPNRP--LHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDLH 603 (1231)
Q Consensus 526 ~~~leV~vvNDa~~~--~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDlH 603 (1231)
+..+|+.++-++.+. .+.+++++|+++|+++++ +.+.++++++|+||+||+.+|+|+|||+|+|
T Consensus 65 d~lmELLI~I~ac~~asa~~vTaViP~Fpyarq~~--------------k~~~r~~i~aklVanlls~aG~dhvItmDlH 130 (316)
T KOG1448|consen 65 DNLMELLIMINACKRASASRVTAVIPYFPYARQDK--------------KDKSRAPILAKLVANLLSSAGADHVITMDLH 130 (316)
T ss_pred HHHHHHHHHHHhcchhhhheeEEeccCCccccchh--------------hhhhhhhHHHHHHHhhhhccCCceEEEeccc
Confidence 567888887777773 368999999999999887 5577999999999999999999999999999
Q ss_pred ccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 604 QKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 604 s~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
..|+|+||++|++|+++.|.+.+|++.++|+.++.+|||||+|+.||++.+|+.|+..|++++|+|+
T Consensus 131 a~Q~qgfF~ipVdnly~~p~~l~~ir~~~~~~~~~vivSPdaGgaKR~~s~ad~l~~~fali~ker~ 197 (316)
T KOG1448|consen 131 ASQIQGFFDIPVDNLYAEPAVLNYIRENIPDSENAVIVSPDAGGAKRVTSLADRLNLDFALIHKERR 197 (316)
T ss_pred chhhCceeeccchhhccchHHHHHHHhhCCCccceEEECCCcchhhhhHHHHHhhcchhhhhhhhhh
Confidence 9999999999999999999999999998999999999999999999999999999999998888874
No 9
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=2.1e-39 Score=368.81 Aligned_cols=233 Identities=33% Similarity=0.495 Sum_probs=197.6
Q ss_pred ecCCCeEEEEEEecCCCC--ceeEEEEEEEEecCCCCCc-----cccC-------------cCeEEeeccccccccCccc
Q psy15568 925 NVSSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDTRPF-----RSVK-------------TPLVTVKLCAAEEIQGFFD 984 (1231)
Q Consensus 925 ~~~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~~p~-----~~~~-------------~~~it~dlhss~~i~~ff~ 984 (1231)
+.|++.|||+++.|++++ ++++++++|||+|+++..+ ++++ .+++++|+| +.++++||+
T Consensus 65 p~nd~lmeLl~~~~alr~~~a~~i~~ViPYl~YaRQDr~~~~~~~~isak~va~ll~~~g~d~vitvD~H-~~~~~~~f~ 143 (319)
T PRK04923 65 PSAENLMELLVLIDALKRASAASVTAVIPYFGYSRQDRRMRSSRVPITAKVAAKMISAMGADRVLTVDLH-ADQIQGFFD 143 (319)
T ss_pred CCchHHHHHHHHHHHHHHcCCcEEEEEeeccccccccccccCCCCCccHHHHHHHHHhcCCCEEEEEeCC-hHHHHhhcC
Confidence 457889999999999997 6899999999777764333 2344 235999999 589999999
Q ss_pred cccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCC
Q psy15568 985 CPVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIA 1063 (1231)
Q Consensus 985 ip~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1231)
+|++++.+.++|.+++..... ..++.+++||.|+++ |+.+++.++
T Consensus 144 ~p~~~l~~~~~l~~~i~~~~~-----------~~~~vVVsPD~Ga~~rA~~lA~~L~----------------------- 189 (319)
T PRK04923 144 VPVDNVYASPLLLADIWRAYG-----------TDNLIVVSPDVGGVVRARAVAKRLD----------------------- 189 (319)
T ss_pred CCceeeeChHHHHHHHHHhcC-----------CCCCEEEEECCchHHHHHHHHHHcC-----------------------
Confidence 999999999999988854321 234679999999987 887777421
Q ss_pred CCCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccCcHHHHHHH
Q psy15568 1064 PPSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAA 1143 (1231)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~~~ 1143 (1231)
+.+.++++|+|.. .+....+.++|+|+||+|||||||||||+||.++
T Consensus 190 ----------~~~~~~~~K~R~~-----------------------~~~~~~~~~~gdv~Gr~viIVDDIidTG~Tl~~a 236 (319)
T PRK04923 190 ----------DADLAIIDKRRPR-----------------------ANVATVMNIIGDVQGKTCVLVDDLVDTAGTLCAA 236 (319)
T ss_pred ----------CCCEEEeccccCC-----------------------CCceEEEecccCCCCCEEEEEecccCchHHHHHH
Confidence 1345778888764 1333456788999999999999999999999999
Q ss_pred HHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCCCCcccc
Q psy15568 1144 AEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYL 1223 (1231)
Q Consensus 1144 ~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~~s~~~l 1223 (1231)
++.|+++||++|+++||||+|+++|.++|.++++++|++|||||++++.+.++|++++|++++||++|+++|+++|+|.|
T Consensus 237 a~~Lk~~GA~~V~~~~THgvfs~~a~~~l~~s~i~~iv~Tdtip~~~~~~~~~k~~~isva~lla~~i~~~~~~~s~~~l 316 (319)
T PRK04923 237 AAALKQRGALKVVAYITHPVLSGPAVDNINNSQLDELVVTDTIPLSEAARACAKIRQLSVAELLAETIRRIAFGESVSSL 316 (319)
T ss_pred HHHHHHCCCCEEEEEEECcccCchHHHHHhhCCCCEEEEeCCccCchhhcccCCeEEEEhHHHHHHHHHHHHcCCCHHHh
Confidence 99999999999999999999999999999999999999999999986556678999999999999999999999999999
Q ss_pred cc
Q psy15568 1224 FR 1225 (1231)
Q Consensus 1224 ~~ 1225 (1231)
|.
T Consensus 317 ~~ 318 (319)
T PRK04923 317 YV 318 (319)
T ss_pred cC
Confidence 85
No 10
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=100.00 E-value=1.6e-39 Score=376.20 Aligned_cols=244 Identities=32% Similarity=0.494 Sum_probs=203.2
Q ss_pred cccce-eecCCCeEEEEEEecCCCC--ceeEEEEEEEEecCCCC----CccccC-------------cCeEEeecccccc
Q psy15568 919 LISPV-FNVSSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDTR----PFRSVK-------------TPLVTVKLCAAEE 978 (1231)
Q Consensus 919 lV~~~-~~~~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~~----p~~~~~-------------~~~it~dlhss~~ 978 (1231)
+|++. .+.|++.|||+++.|++++ +++|++++|||+|++++ ++++++ .+++|+|+| +.+
T Consensus 171 IVqS~~~pvNd~LmELLllidAlr~agAkrItlViPYl~YaRQDR~~~~gepIsak~vA~lL~~~G~d~VitvDlH-s~~ 249 (439)
T PTZ00145 171 IIQPTCPPVNENLIELLLMISTCRRASAKKITAVIPYYGYARQDRKLSSRVPISAADVARMIEAMGVDRVVAIDLH-SGQ 249 (439)
T ss_pred EEecCCCCCcHHHHHHHHHHHHHHHhccCeEEEEeecccchheecccCCCCChhHHHHHHHHHHcCCCeEEEEecC-hHH
Confidence 34443 4558889999999999998 78999999997777743 344444 234999999 589
Q ss_pred ccCccc--cccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCC
Q psy15568 979 IQGFFD--CPVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRA 1055 (1231)
Q Consensus 979 i~~ff~--ip~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~ 1055 (1231)
+++||+ +|+++|.+.+++..|+... . +..|.+++||.|++. |+.+++.++..+
T Consensus 250 i~~fF~~~iPvdnl~a~~~~a~~i~~~-~-----------l~~pVVVsPD~Ga~~RAr~~A~~L~~~~------------ 305 (439)
T PTZ00145 250 IQGFFGPRVPVDNLEAQLIGLDYFTKK-D-----------LYKPVIVSPDAGGVYRARKFQDGLNHRG------------ 305 (439)
T ss_pred HHhhcCCCcccccccccHHHHHHHhhc-C-----------CCccEEEccCcchHHHHHHHHHHhcccc------------
Confidence 999996 9999999999998888542 1 234779999999987 888876543211
Q ss_pred CCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccC
Q psy15568 1056 SPPPSSIAPPSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVD 1135 (1231)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~ 1135 (1231)
+.+++.++++|+|..+ ++...+.++|||+||+|||||||||
T Consensus 306 ----------------~~~~~~avl~K~R~~~-----------------------~~v~~~~lvgdV~Gk~vIIVDDIId 346 (439)
T PTZ00145 306 ----------------ISDCGIAMLIKQRTKP-----------------------NEIEKMDLVGNVYDSDVIIVDDMID 346 (439)
T ss_pred ----------------ccCCCEEEEEeecCCC-----------------------CceEEEeccCCCCCCEEEEEcceeC
Confidence 1124567788988752 3334577899999999999999999
Q ss_pred cHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHh
Q psy15568 1136 DVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMH 1215 (1231)
Q Consensus 1136 tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~ 1215 (1231)
||+||+++++.|+++||++|+++||||+|+++|.++|.+++|++|++|||||++++.+.++|++++|||++||++|+++|
T Consensus 347 TG~Tl~~aa~~Lk~~GA~~V~~~~THglfs~~A~~rl~~s~i~~IvvTdTIp~~~~~~~~~k~~visVA~llAeaI~~i~ 426 (439)
T PTZ00145 347 TSGTLCEAAKQLKKHGARRVFAFATHGLFSGPAIERIEASPLEEVVVTDTVKSNKNIDSCKKITKLSVSVLVADAIRRIH 426 (439)
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEEEcccCChhHHHHHhcCCCCEEEEeCCCcCchhhcccCCeEEEEhHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999865556789999999999999999999
Q ss_pred CCCCccccccC
Q psy15568 1216 NKESMSYLFRN 1226 (1231)
Q Consensus 1216 ~~~s~~~l~~~ 1226 (1231)
+++|+|.||+-
T Consensus 427 ~~~s~s~lf~~ 437 (439)
T PTZ00145 427 QKESLNDLFNV 437 (439)
T ss_pred cCCCHHHHhCc
Confidence 99999999974
No 11
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional
Probab=100.00 E-value=1.2e-38 Score=367.73 Aligned_cols=131 Identities=17% Similarity=0.249 Sum_probs=117.4
Q ss_pred CCCeEEEEEEeCCCC-CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEecc
Q psy15568 525 SSRTLEVVLLNDPNR-PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDLH 603 (1231)
Q Consensus 525 ~~~~leV~vvNDa~~-~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDlH 603 (1231)
+++.++|+++-|+++ +.+++++++||++|++|++ + .+|+++++|++|+||+++|+|+|+|||+|
T Consensus 105 nd~lmeLll~idalragA~rIt~ViPY~~YaRQDr--------------~-~~~e~itak~vA~lL~~~G~d~vitvDlH 169 (382)
T PRK06827 105 DDHFQDLKRTIDAIRGKARRITVIMPFLYESRQHK--------------R-KGRESLDCALALQELEELGVDNIITFDAH 169 (382)
T ss_pred cHHHHHHHHHHHHHhcCCCeEEEEeeccccccccc--------------c-cCCCCccHHHHHHHHHHcCCCeEEEecCC
Confidence 356789999988887 3357899999999999988 5 57899999999999999999999999999
Q ss_pred ccccccccC-cccccccCchhHHHHhhhhCC----CCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 604 QKEIQGFFD-CPVDNLRASPFLLQYIQDSIP----DYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 604 s~~~~~~F~-~p~~~l~a~~~l~~~l~~~~~----~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
++++++||+ +|++|+++.+.+++||++.+. +.++++|||||.||++||+.+|+.|++++++++|+|.
T Consensus 170 s~~i~~~F~~~pvdnl~a~~~l~~~i~~~i~~l~~d~~~~VVVsPD~Gg~~rA~~~A~~Lg~~~ai~~K~R~ 241 (382)
T PRK06827 170 DPRIENAIPLMGFENLYPSYQIIKALLKNEKDLEIDKDHLMVISPDTGAMDRAKYYASVLGVDLGLFYKRRD 241 (382)
T ss_pred hHHhcccCCCCCcCCcCchHHHHHHHHHhcccccccCCCcEEEEECccchHHHHHHHHHhCCCEEEEEcccC
Confidence 999999999 589999999999999976432 2378999999999999999999999999999999873
No 12
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=1.2e-38 Score=364.16 Aligned_cols=235 Identities=28% Similarity=0.446 Sum_probs=197.2
Q ss_pred ecCCCeEEEEEEecCCCC--ceeEEEEEEEEecCCCCC----ccccCc-------------CeEEeeccccccccCcccc
Q psy15568 925 NVSSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDTRP----FRSVKT-------------PLVTVKLCAAEEIQGFFDC 985 (1231)
Q Consensus 925 ~~~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~~p----~~~~~~-------------~~it~dlhss~~i~~ff~i 985 (1231)
+.|++.|||+++.|++++ ++++++++|||+|++++. +++++. +++++|+| +.++++||++
T Consensus 64 ~~nd~lmelll~~~alr~~~a~~i~~V~PYl~YaRQDr~~~~~e~isak~~a~ll~~~g~d~vit~D~H-~~~~~~~f~~ 142 (320)
T PRK02269 64 PVNDNLMEILIMVDALKRASAESINVVMPYYGYARQDRKARSREPITSKLVANMLEVAGVDRLLTVDLH-AAQIQGFFDI 142 (320)
T ss_pred CccchHHHHHHHHHHHHHhCCCeEEEEEeccccchhhcccCCCCCchHHHHHHHHhhcCCCEEEEECCC-hHHHhccccC
Confidence 447889999999999998 689999999987777433 344442 34999999 5899999999
Q ss_pred ccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCCC
Q psy15568 986 PVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIAP 1064 (1231)
Q Consensus 986 p~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1231)
|++++.+.+++.+++.+.. . | ...+.+++||.|+++ |+.+++.++
T Consensus 143 p~~~l~~~p~l~~~i~~~~-~-~--------~~~~vvVsPd~G~~~~A~~lA~~lg------------------------ 188 (320)
T PRK02269 143 PVDHLMGAPLIADYFDRRG-L-V--------GDDVVVVSPDHGGVTRARKLAQFLK------------------------ 188 (320)
T ss_pred CchhhhhHHHHHHHHHHhC-C-C--------CCCcEEEEECccHHHHHHHHHHHhC------------------------
Confidence 9999999999999886531 1 0 134679999999988 888877532
Q ss_pred CCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccCcHHHHHHHH
Q psy15568 1065 PSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAA 1144 (1231)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~~~~ 1144 (1231)
.+.++++|+|.. ...+....+.+.|+++||+|||||||||||+||.+++
T Consensus 189 ----------~~~~~~~k~r~~---------------------~~~~~~~~~~~~gdv~Gr~viIVDDIidTG~Tl~~aa 237 (320)
T PRK02269 189 ----------TPIAIIDKRRSV---------------------DKMNTSEVMNIIGNVKGKKCILIDDMIDTAGTICHAA 237 (320)
T ss_pred ----------CCEEEEEecccC---------------------CCCceeEEEEeccccCCCEEEEEeeecCcHHHHHHHH
Confidence 234556676653 1234445667889999999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCCCCccccc
Q psy15568 1145 EVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLF 1224 (1231)
Q Consensus 1145 ~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~~s~~~l~ 1224 (1231)
+.|+++||++|+++||||+|+++|.++|.++++++|++|||||++++ +.++|++++|+|++||++|+++|+++|++.||
T Consensus 238 ~~Lk~~GA~~V~~~~tHglf~~~a~~~l~~~~i~~iv~Tdti~~~~~-~~~~k~~~isva~~la~~i~~~~~~~s~~~~~ 316 (320)
T PRK02269 238 DALAEAGATEVYASCTHPVLSGPALDNIQKSAIEKLVVLDTIYLPEE-RLIDKIEQISIADLLGEAIIRIHEKRPLSPLF 316 (320)
T ss_pred HHHHHCCCCEEEEEEECcccCchHHHHHHhCCCCEEEEeCCCCCccc-cccCCeEEEEhHHHHHHHHHHHHcCCCHHHHh
Confidence 99999999999999999999999999999999999999999998753 45789999999999999999999999999999
Q ss_pred cC
Q psy15568 1225 RN 1226 (1231)
Q Consensus 1225 ~~ 1226 (1231)
++
T Consensus 317 ~~ 318 (320)
T PRK02269 317 EM 318 (320)
T ss_pred cC
Confidence 74
No 13
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=1.9e-38 Score=362.83 Aligned_cols=231 Identities=26% Similarity=0.402 Sum_probs=195.3
Q ss_pred ecCCCeEEEEEEecCCCC--ceeEEEEEEEEecCCCC----CccccCcC-------------eEEeeccccccccCcccc
Q psy15568 925 NVSSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDTR----PFRSVKTP-------------LVTVKLCAAEEIQGFFDC 985 (1231)
Q Consensus 925 ~~~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~~----p~~~~~~~-------------~it~dlhss~~i~~ff~i 985 (1231)
+.|++.|||+++.|++++ ++++++++|||+|+++. ++++++.+ ++++|+| +.++++||++
T Consensus 68 p~nd~l~eLll~~~alr~~~a~~i~~ViPYl~YaRQDr~~~~~e~isak~vA~ll~~~g~d~vit~DlH-~~~i~~~F~i 146 (332)
T PRK00553 68 PVNDSLMELLIAIDALKRGSAKSITAILPYYGYARQDRKTAGREPITSKLVADLLTKAGVTRVTLTDIH-SDQTQGFFDI 146 (332)
T ss_pred CCchHHHHHHHHHHHHHHcCCCeEEEEeeccccchhhcccCCCCCccHHHHHHHHHhcCCCEEEEEeCC-hHHHHhhcCC
Confidence 457889999999999998 68999999997777743 34444422 4999999 5899999999
Q ss_pred ccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCCC
Q psy15568 986 PVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIAP 1064 (1231)
Q Consensus 986 p~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1231)
|+++|.+.++|.+++++... ..++.|++||.|++. |+.+++.+
T Consensus 147 pv~~l~a~~~~~~~~~~~~~-----------~~~~vvVsPD~gg~~rA~~lA~~l------------------------- 190 (332)
T PRK00553 147 PVDILRTYHVFLSRVLELLG-----------KKDLVVVSPDYGGVKRARLIAESL------------------------- 190 (332)
T ss_pred CcceeechHHHHHHHHHhcC-----------CCCeEEEEECCCcHHHHHHHHHHh-------------------------
Confidence 99999999999888854321 234679999999988 87777742
Q ss_pred CCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccCcHHHHHHHH
Q psy15568 1065 PSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAA 1144 (1231)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~~~~ 1144 (1231)
+.+.++++|+|.. .+..+.+.+.|+++||+|||||||++||+|+.+++
T Consensus 191 ---------g~~~~vi~K~r~~-----------------------~~~~~~~~~~gdv~Gk~VIIVDDIi~TG~Tl~~aa 238 (332)
T PRK00553 191 ---------ELPLAIIDKRRPK-----------------------HNVAESINVLGEVKNKNCLIVDDMIDTGGTVIAAA 238 (332)
T ss_pred ---------CCCEEEEEEecCC-----------------------cceEeeEEeeccCCCCEEEEEeccccchHHHHHHH
Confidence 2234567777754 24445677889999999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEEecCCCCChhhhhhcC----CCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCCCCc
Q psy15568 1145 EVLKDRGAYKIYVLATHGLLSSDAPLLIEES----PIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESM 1220 (1231)
Q Consensus 1145 ~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~----~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~~s~ 1220 (1231)
+.|+++||++|+++||||+|+++|.++|.++ ++++|++|||||+++ ...++|++++|+|++||++|+++|+++|+
T Consensus 239 ~~Lk~~GA~~V~~~atHglf~~~a~~~l~~~~~~~~i~~iv~Tntip~~~-~~~~~~~~~vsva~~la~~i~~~~~~~s~ 317 (332)
T PRK00553 239 KLLKKQKAKKVCVMATHGLFNKNAIQLFDEAFKKKLIDKLFVSNSIPQTK-FEKKPQFKVVDLAHLYEEVLLCYANGGSI 317 (332)
T ss_pred HHHHHcCCcEEEEEEEeeecCchHHHHHHhccccCCCCEEEEeCCccCcc-cccCCCeEEEEhHHHHHHHHHHHhcCCCH
Confidence 9999999999999999999999999999755 899999999999874 44578999999999999999999999999
Q ss_pred ccccc
Q psy15568 1221 SYLFR 1225 (1231)
Q Consensus 1221 ~~l~~ 1225 (1231)
|+||+
T Consensus 318 ~~~~~ 322 (332)
T PRK00553 318 SAIYT 322 (332)
T ss_pred HHHHh
Confidence 99998
No 14
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=2.7e-37 Score=352.59 Aligned_cols=231 Identities=24% Similarity=0.430 Sum_probs=190.7
Q ss_pred ecCCCeEEEEEEecCCCC--ceeEEEEEEEEecCCCCC----ccccC-------------cCeEEeeccccccccCcccc
Q psy15568 925 NVSSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDTRP----FRSVK-------------TPLVTVKLCAAEEIQGFFDC 985 (1231)
Q Consensus 925 ~~~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~~p----~~~~~-------------~~~it~dlhss~~i~~ff~i 985 (1231)
+.|++.|||+++.|++++ ++++++++|||+|+++.. +++++ .+++++|+| +.++++||++
T Consensus 68 ~~nd~l~eLll~~~alr~~~a~~i~lViPYl~YaRQDr~~~~ge~isak~~a~lL~~~g~d~vitvD~H-~~~i~~~F~~ 146 (323)
T PRK02458 68 PVNDHLWELLIMIDACKRASANTVNVVLPYFGYARQDRIAKPREPITAKLVANMLVKAGVDRVLTLDLH-AVQVQGFFDI 146 (323)
T ss_pred CCchHHHHHHHHHHHHHHcCCceEEEEEeccccchhhcccCCCCCchHHHHHHHHhhcCCCeEEEEecC-cHHhhccccC
Confidence 457789999999999997 689999999977777433 33333 235999999 5899999999
Q ss_pred ccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCCC
Q psy15568 986 PVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIAP 1064 (1231)
Q Consensus 986 p~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1231)
|++++.+.+++.+++.+.. . + ...+.+++||.|++. |+.+++.++
T Consensus 147 p~~nl~~~p~~~~~l~~~~-~-~--------~~~~vvV~pd~Ga~~~A~~la~~L~------------------------ 192 (323)
T PRK02458 147 PVDNLFTVPLFAKHYCKKG-L-S--------GSDVVVVSPKNSGIKRARSLAEYLD------------------------ 192 (323)
T ss_pred CceEEEEHHHHHHHHHHhC-C-C--------CCceEEEEECCChHHHHHHHHHHhC------------------------
Confidence 9999999999998885431 1 0 134679999999988 888877532
Q ss_pred CCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccCcHHHHHHHH
Q psy15568 1065 PSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAA 1144 (1231)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~~~~ 1144 (1231)
.+.++++|+|... . .....++|+|+||+|||||||||||+||.+++
T Consensus 193 ----------~~~~~~~~~r~~~-----------------------~-~~~~~i~gdV~gk~viIVDDIidTG~Tl~~aa 238 (323)
T PRK02458 193 ----------APIAIIDYAQDDS-----------------------E-REEGYIIGDVAGKKAILIDDILNTGKTFAEAA 238 (323)
T ss_pred ----------CCEEEEEEecCCC-----------------------c-ceeeccccccCCCEEEEEcceeCcHHHHHHHH
Confidence 2334555655321 0 01224679999999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCCCCccccc
Q psy15568 1145 EVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLF 1224 (1231)
Q Consensus 1145 ~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~~s~~~l~ 1224 (1231)
+.|+++||++|+++||||+|+++|.++|.++++++|++|||||++. +.++|++++|++++||++|+++|+++|+|+||
T Consensus 239 ~~Lk~~GA~~V~~~~tHgif~~~a~~~l~~s~i~~iv~TdTi~~~~--~~~~k~~~isva~lla~~i~~~~~~~s~~~~~ 316 (323)
T PRK02458 239 KIVEREGATEIYAVASHGLFAGGAAEVLENAPIKEILVTDSVATKE--RVPKNVTYLSASELIADAIIRIHERKPLSPLF 316 (323)
T ss_pred HHHHhCCCCcEEEEEEChhcCchHHHHHhhCCCCEEEEECCcCCch--hcCCCcEEEEhHHHHHHHHHHHHcCCCHHHHh
Confidence 9999999999999999999999999999999999999999999863 34679999999999999999999999999999
Q ss_pred cC
Q psy15568 1225 RN 1226 (1231)
Q Consensus 1225 ~~ 1226 (1231)
+.
T Consensus 317 ~~ 318 (323)
T PRK02458 317 AY 318 (323)
T ss_pred Cc
Confidence 73
No 15
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=2.8e-37 Score=350.41 Aligned_cols=236 Identities=29% Similarity=0.440 Sum_probs=196.5
Q ss_pred eecCCCeEEEEEEecCCCC--ceeEEEEEEEEecCCCC----CccccC-------------cCeEEeeccccccccCccc
Q psy15568 924 FNVSSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDTR----PFRSVK-------------TPLVTVKLCAAEEIQGFFD 984 (1231)
Q Consensus 924 ~~~~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~~----p~~~~~-------------~~~it~dlhss~~i~~ff~ 984 (1231)
.+.|++.||++++.|++++ +++|++++|||+|+|+. ++++++ .+++|+|+| +.++++||+
T Consensus 47 ~p~nd~l~ell~~~~a~r~~~a~~i~~ViPYl~YaRQDr~~~~~e~isak~va~lL~~~g~d~vitvD~H-~~~~~~~f~ 125 (304)
T PRK03092 47 APINKWLMEQLIMIDALKRASAKRITVVLPFYPYARQDKKHRGREPISARLVADLFKTAGADRIMTVDLH-TAQIQGFFD 125 (304)
T ss_pred CCCcHHHHHHHHHHHHHHHcCCCeEEEEEecccccccccccCCCCCccHHHHHHHHHhcCCCeEEEEecC-hHHHHhhcC
Confidence 3457889999999999998 68999999997777643 333444 234999999 599999999
Q ss_pred cccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCC
Q psy15568 985 CPVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIA 1063 (1231)
Q Consensus 985 ip~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1231)
+|+++|.+.+.+.+++...+. ..++.+++||.|++. |+.+++.++.
T Consensus 126 ~p~~~l~~~~~la~~i~~~~~-----------~~~~vvVspd~Ga~~~a~~la~~L~~---------------------- 172 (304)
T PRK03092 126 GPVDHLFAMPLLADYVRDKYD-----------LDNVTVVSPDAGRVRVAEQWADRLGG---------------------- 172 (304)
T ss_pred CCeeeEechHHHHHHHHHhcC-----------CCCcEEEEecCchHHHHHHHHHHcCC----------------------
Confidence 999999999999998864421 134679999999987 8777775320
Q ss_pred CCCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccCcHHHHHHH
Q psy15568 1064 PPSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAA 1143 (1231)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~~~ 1143 (1231)
.+.++++|.|... ..+....+.+.|+|+||+||||||||+||+||.++
T Consensus 173 -----------~~~~~i~k~R~~~---------------------~~~~~~~~~~~~dv~gr~viIVDDIi~TG~Tl~~a 220 (304)
T PRK03092 173 -----------APLAFIHKTRDPT---------------------VPNQVVANRVVGDVEGRTCVLVDDMIDTGGTIAGA 220 (304)
T ss_pred -----------CCEEEEEEEcccC---------------------CCCceEEEecCcCCCCCEEEEEccccCcHHHHHHH
Confidence 2345667777531 11223355678999999999999999999999999
Q ss_pred HHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCCCCcccc
Q psy15568 1144 AEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYL 1223 (1231)
Q Consensus 1144 ~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~~s~~~l 1223 (1231)
++.|+++||++|+++||||+|++++.++|.++++++|++|||||++.+ ..++|++++|++++||++|+++|+++|+|.|
T Consensus 221 a~~Lk~~Ga~~I~~~~tH~v~~~~a~~~l~~~~~~~i~~t~tip~~~~-~~~~~~~~~sva~~la~~i~~~~~~~s~~~l 299 (304)
T PRK03092 221 VRALKEAGAKDVIIAATHGVLSGPAAERLKNCGAREVVVTDTLPIPEE-KRFDKLTVLSIAPLLARAIREVFEDGSVTSL 299 (304)
T ss_pred HHHHHhcCCCeEEEEEEcccCChHHHHHHHHCCCCEEEEeeeeccchh-hcCCCeEEEEhHHHHHHHHHHHHcCCCHHHH
Confidence 999999999999999999999999999999999999999999999754 4578999999999999999999999999999
Q ss_pred ccC
Q psy15568 1224 FRN 1226 (1231)
Q Consensus 1224 ~~~ 1226 (1231)
|+.
T Consensus 300 ~~~ 302 (304)
T PRK03092 300 FDG 302 (304)
T ss_pred hCC
Confidence 975
No 16
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-37 Score=341.53 Aligned_cols=248 Identities=36% Similarity=0.631 Sum_probs=214.8
Q ss_pred CCCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEec
Q psy15568 525 SSRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDL 602 (1231)
Q Consensus 525 ~~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDl 602 (1231)
++..||+.++-|+++ +++++++++|||+|+||++ ++++||||++|++|+||+.+|+|||+||||
T Consensus 65 nd~lmELLi~idA~k~asA~~It~ViPY~gYARQDk--------------~~~~repIsaklvA~lL~~aG~drv~TvDl 130 (314)
T COG0462 65 NDNLMELLIMIDALKRASAKRITAVIPYFGYARQDK--------------AFKPREPISAKLVANLLETAGADRVLTVDL 130 (314)
T ss_pred CHHHHHHHHHHHHHHhcCCceEEEEeecchhhccCc--------------ccCCCCCEeHHHHHHHHHHcCCCeEEEEcC
Confidence 467899999999988 4678999999999999986 678999999999999999999999999999
Q ss_pred cccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccccccccccccccC
Q psy15568 603 HQKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDEYEVDLT 682 (1231)
Q Consensus 603 Hs~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~~~~~d~~~d~~p 682 (1231)
|++|+|+||++|++||++.|.+++|+++.. +.+++||||||.||++||+.+|+.|++++++++|+|++ +
T Consensus 131 H~~qiqgfFdipvdnl~a~p~l~~~~~~~~-~~~d~vVVSPD~Ggv~RAr~~A~~L~~~~a~i~K~R~~--~-------- 199 (314)
T COG0462 131 HAPQIQGFFDIPVDNLYAAPLLAEYIREKY-DLDDPVVVSPDKGGVKRARALADRLGAPLAIIDKRRDS--S-------- 199 (314)
T ss_pred CchhhcccCCCccccccchHHHHHHHHHhc-CCCCcEEECCCccHHHHHHHHHHHhCCCEEEEEEeecC--C--------
Confidence 999999999999999999999999999864 55679999999999999999999999999999999940 0
Q ss_pred CCcceeeecCCCccccccccccCCccccceeecCCCChhhhHHHHHHHhcCcEEEEeCCCCCCcccccccccccccccCc
Q psy15568 683 GRPDKVYLSGLPDRVLISHVSQIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDEYEVDLTRYIRENP 762 (1231)
Q Consensus 683 g~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~v~Rlr~SialW~G~NE~~~~~~~~~~~~~~~~~~~ 762 (1231)
.|+.
T Consensus 200 ----------------------------------------------------------~~~v------------------ 203 (314)
T COG0462 200 ----------------------------------------------------------PNVV------------------ 203 (314)
T ss_pred ----------------------------------------------------------CCeE------------------
Confidence 0000
Q ss_pred hhhHHhHHHHHHHhHHHHHHhhCCCCCcccCCCCCCcCCcccccccCCCCCCCCCCCCcccCCcCCCCCCCccccccCCC
Q psy15568 763 ELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDSGWTGVSSPSPCPAPLLSYHGDG 842 (1231)
Q Consensus 763 ~~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~SSPs~G~~~~~~~~~~~~~p~~~~~Gd~~~~~~~~~~p~~~~f~s~~g~~ 842 (1231)
T Consensus 204 -------------------------------------------------------------------------------- 203 (314)
T COG0462 204 -------------------------------------------------------------------------------- 203 (314)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccccCCCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEecCCCCchhHHHHHHhhcccccccc
Q psy15568 843 SKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDYDGNWKMLHYFARKFFAPVLISP 922 (1231)
Q Consensus 843 ~~~s~~~~~~g~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~GsliDy~GrwK~lhY~akr~~aPvlV~~ 922 (1231)
..+.+.||++||.|+++|||++++++++.+++++++.|++++|+++|||+|.+..
T Consensus 204 ----~~~~~~gdV~gk~~iiVDDiIdTgGTi~~Aa~~Lk~~GAk~V~a~~tH~vfs~~a--------------------- 258 (314)
T COG0462 204 ----EVMNLIGDVEGKDVVIVDDIIDTGGTIAKAAKALKERGAKKVYAAATHGVFSGAA--------------------- 258 (314)
T ss_pred ----EEeecccccCCCEEEEEeccccccHHHHHHHHHHHHCCCCeEEEEEEchhhChHH---------------------
Confidence 1244678999999999999999999999999999999999999999999986310
Q ss_pred eeecCCCeEEEEEEecCCCCceeEEEEEEEEecCCCCCccccCcCeEEeeccccccccCccccccccccCchHHHHHHHh
Q psy15568 923 VFNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWNDTRPFRSVKTPLVTVKLCAAEEIQGFFDCPVDNLRASPFLLQYIQD 1002 (1231)
Q Consensus 923 ~~~~~~~~leL~lvnDa~~~a~~i~v~ip~y~~~~~~p~~~~~~~~it~dlhss~~i~~ff~ip~~~l~~~~~l~~~l~~ 1002 (1231)
.+.+.++.+ +
T Consensus 259 ----------------------------------------------------------------~~~l~~~~i------~ 268 (314)
T COG0462 259 ----------------------------------------------------------------LERLEASAI------D 268 (314)
T ss_pred ----------------------------------------------------------------HHHHhcCCC------C
Confidence 112333333 7
Q ss_pred ccccccCccccccccCCCcEEeecchhhHHHHHHHhhcccchhhhhh
Q psy15568 1003 SVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLFR 1049 (1231)
Q Consensus 1003 ~~~~~n~v~~~~~~~~~p~l~~pD~g~~~a~~i~~~~~~~~~~~~~~ 1049 (1231)
++++||++|++ +....+++..+|+++++|++|+++|+++|+|.+|.
T Consensus 269 ~vivTnTi~~~-~~~~~~~~~~isva~liaeaI~ri~~~~svs~lf~ 314 (314)
T COG0462 269 EVIVTDTIPLP-EKKKIPKVSVISVAPLIAEAIRRIHNGESVSSLFD 314 (314)
T ss_pred EEEEeCCcccc-cccccCceEEEEhHHHHHHHHHHHHcCCChhHhhC
Confidence 88999999887 55566799999999999999999999999988873
No 17
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=8e-36 Score=340.55 Aligned_cols=232 Identities=29% Similarity=0.501 Sum_probs=195.4
Q ss_pred eecCCCeEEEEEEecCCCC--ceeEEEEEEEEecCCCC----CccccCc-------------CeEEeeccccccccCccc
Q psy15568 924 FNVSSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDTR----PFRSVKT-------------PLVTVKLCAAEEIQGFFD 984 (1231)
Q Consensus 924 ~~~~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~~----p~~~~~~-------------~~it~dlhss~~i~~ff~ 984 (1231)
.+.|++.|||+++.|++++ +++|++++|||+|++++ ++++++. +++++|+| +.++++||+
T Consensus 79 ~p~nd~l~eLll~~~alr~~ga~ri~~ViPYl~YaRQDr~~~~~e~isak~vA~lL~~~g~d~vitvDlH-~~~~~~fF~ 157 (330)
T PRK02812 79 APVNDHLMELLIMVDACRRASARQITAVIPYYGYARADRKTAGRESITAKLVANLITKAGADRVLAMDLH-SAQIQGYFD 157 (330)
T ss_pred CCccHHHHHHHHHHHHHHHhCCceEEEEEecccccccccccCCCCCchHHHHHHHHHhcCCCEEEEEECC-chHHcCccC
Confidence 3457889999999999997 68999999997777743 3444442 24999999 589999999
Q ss_pred cccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCC
Q psy15568 985 CPVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIA 1063 (1231)
Q Consensus 985 ip~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1231)
+|++++.+.+.+.+|+... .. .++.+++||.|+.. |+.+++.++
T Consensus 158 ipv~nl~~~~~l~~~i~~~-~~-----------~~~vvVsPD~gg~~ra~~~A~~L~----------------------- 202 (330)
T PRK02812 158 IPCDHVYGSPVLLDYLASK-NL-----------EDIVVVSPDVGGVARARAFAKKLN----------------------- 202 (330)
T ss_pred CCceeeeChHHHHHHHHhc-CC-----------CCeEEEEECCccHHHHHHHHHHhC-----------------------
Confidence 9999999999999998543 11 23669999999988 888877521
Q ss_pred CCCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccCcHHHHHHH
Q psy15568 1064 PPSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAA 1143 (1231)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~~~ 1143 (1231)
+++.++++|+|+. .+....+.+.|+++||+||||||||+||+|+.++
T Consensus 203 ----------~~~~~~~~k~R~~-----------------------~~~~~~~~~~~~v~g~~viiVDDii~TG~T~~~a 249 (330)
T PRK02812 203 ----------DAPLAIIDKRRQA-----------------------HNVAEVLNVIGDVKGKTAILVDDMIDTGGTICEG 249 (330)
T ss_pred ----------CCCEEEEEeeccC-----------------------CceeeeEeccccCCCCEEEEEccccCcHHHHHHH
Confidence 1234667777754 2333456778999999999999999999999999
Q ss_pred HHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCCCCcccc
Q psy15568 1144 AEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYL 1223 (1231)
Q Consensus 1144 ~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~~s~~~l 1223 (1231)
++.|+++||++|++++|||+|+++|.++|+++++++|++|||+|++. ...+++++.+|++++||++|+++|+++|+|.|
T Consensus 250 ~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~id~iv~tnti~~~~-~~~~~~~~~~~va~lla~~i~~~~~~~s~~~l 328 (330)
T PRK02812 250 ARLLRKEGAKQVYACATHAVFSPPAIERLSSGLFEEVIVTNTIPVPE-ERRFPQLKVLSVANMLGEAIWRIHEESSVSSM 328 (330)
T ss_pred HHHHhccCCCeEEEEEEcccCChHHHHHHhhCCCCEEEEeCCCCChh-hcccCCceEEEHHHHHHHHHHHHHcCCCHHHh
Confidence 99999999999999999999999999999989999999999999874 34578999999999999999999999999999
Q ss_pred cc
Q psy15568 1224 FR 1225 (1231)
Q Consensus 1224 ~~ 1225 (1231)
|+
T Consensus 329 ~~ 330 (330)
T PRK02812 329 FR 330 (330)
T ss_pred cC
Confidence 85
No 18
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=100.00 E-value=2.1e-34 Score=326.69 Aligned_cols=233 Identities=27% Similarity=0.455 Sum_probs=193.2
Q ss_pred ecCCCeEEEEEEecCCCC--ceeEEEEEEEEecCCCCCc----cccCc-------------CeEEeeccccccccCcccc
Q psy15568 925 NVSSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDTRPF----RSVKT-------------PLVTVKLCAAEEIQGFFDC 985 (1231)
Q Consensus 925 ~~~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~~p~----~~~~~-------------~~it~dlhss~~i~~ff~i 985 (1231)
+.|++.|||+++.|++++ ++++++++|||+|++++.+ ++++. +++++|+| +.++++||++
T Consensus 50 p~nd~l~eLl~~~~a~r~~~a~~i~~ViPYl~YsRQDr~~~~~e~isak~va~lL~~~g~d~vi~vDlH-s~~i~~~F~i 128 (302)
T PLN02369 50 PANENLMELLIMIDACRRASAKRITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLH-SGQSMGYFDI 128 (302)
T ss_pred CcchHHHHHHHHHHHHHHcCCCeEEEEeecccccccccccCCCCCchHHHHHHHHHhcCCCEEEEEECC-chHHhhccCC
Confidence 457889999999999998 6899999999777775433 34432 24999999 5899999999
Q ss_pred ccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCCC
Q psy15568 986 PVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIAP 1064 (1231)
Q Consensus 986 p~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1231)
|++++.+.+.+.+++.+.. .. ..++.+++||.|++. |+.+++.+.
T Consensus 129 p~~~l~~~~~~~~~i~~~~-~~---------~~~~vvVspd~gg~~~a~~~a~~l~------------------------ 174 (302)
T PLN02369 129 PVDHVYGQPVILDYLASKT-IS---------SPDLVVVSPDVGGVARARAFAKKLS------------------------ 174 (302)
T ss_pred ceecccchHHHHHHHHHhC-CC---------CCceEEEEECcChHHHHHHHHHHcC------------------------
Confidence 9999999999999885431 10 123579999999987 777776421
Q ss_pred CCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccCcHHHHHHHH
Q psy15568 1065 PSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAA 1144 (1231)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~~~~ 1144 (1231)
+.+.++++|+|.. .+....+.+.|+++||+|||||||++||+|+.+++
T Consensus 175 ---------~~~~~~l~k~R~~-----------------------~~~~~~~~~~~~v~g~~viivDDii~TG~Tl~~a~ 222 (302)
T PLN02369 175 ---------DAPLAIVDKRRQG-----------------------HNVAEVMNLIGDVKGKVAIMVDDMIDTAGTITKGA 222 (302)
T ss_pred ---------CCCEEEEEEecCC-----------------------cceeeeEecCCCCCCCEEEEEcCcccchHHHHHHH
Confidence 1234566777753 12233456789999999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCCCCccccc
Q psy15568 1145 EVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLF 1224 (1231)
Q Consensus 1145 ~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~~s~~~l~ 1224 (1231)
+.|++.||++|++++|||+|++++.++|.++++++|++|||+|++. ...++|++++|++++||++|+++|+++|++.||
T Consensus 223 ~~l~~~Ga~~v~~~~tH~v~~~~a~~~l~~~~~~~iv~t~ti~~~~-~~~~~~~~~~~v~~~la~~i~~~~~~~s~~~~~ 301 (302)
T PLN02369 223 ALLHQEGAREVYACATHAVFSPPAIERLSSGLFQEVIVTNTIPVSE-KNYFPQLTVLSVANLLGETIWRVHDDCSVSSIF 301 (302)
T ss_pred HHHHhCCCCEEEEEEEeeeeCHHHHHHHHhCCCCEEEEeCCCCChh-hcccCCceEEEHHHHHHHHHHHHhcCCChHHhc
Confidence 9999999999999999999999999999999999999999999874 345789999999999999999999999999998
Q ss_pred c
Q psy15568 1225 R 1225 (1231)
Q Consensus 1225 ~ 1225 (1231)
.
T Consensus 302 ~ 302 (302)
T PLN02369 302 D 302 (302)
T ss_pred C
Confidence 4
No 19
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=2.7e-34 Score=327.13 Aligned_cols=231 Identities=35% Similarity=0.559 Sum_probs=194.9
Q ss_pred ecCCCeEEEEEEecCCCC--ceeEEEEEEEEecCCCCC----ccccC-------------cCeEEeeccccccccCcccc
Q psy15568 925 NVSSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDTRP----FRSVK-------------TPLVTVKLCAAEEIQGFFDC 985 (1231)
Q Consensus 925 ~~~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~~p----~~~~~-------------~~~it~dlhss~~i~~ff~i 985 (1231)
+.|++.|||+++.+++++ ++++++++|||+|++++. +++++ .+++++|+| +.++++||++
T Consensus 59 ~~nd~l~eLll~~~alr~~ga~~i~lViPYl~YsRQDr~~~~ge~isak~~a~lL~~~g~d~vitvD~H-~~~~~~~f~~ 137 (309)
T PRK01259 59 PTNDNLMELLIMIDALKRASAGRITAVIPYFGYARQDRKARSRVPITAKLVANLLETAGADRVLTMDLH-ADQIQGFFDI 137 (309)
T ss_pred CCcHHHHHHHHHHHHHHHcCCceEEEEeeccccchhhhhhccCCCchHHHHHHHHhhcCCCEEEEEcCC-hHHHcCcCCC
Confidence 447789999999999987 689999999977777543 33443 234999999 5899999999
Q ss_pred ccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCCC
Q psy15568 986 PVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIAP 1064 (1231)
Q Consensus 986 p~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1231)
|+++|.+.+.+.+++.+. . ...+.+++||.|+.. |+.+++.++
T Consensus 138 p~~~l~~~~~l~~~i~~~-~-----------~~~~vvv~pd~Gg~~~A~~la~~Lg------------------------ 181 (309)
T PRK01259 138 PVDNLYGSPILLEDIKQK-N-----------LENLVVVSPDVGGVVRARALAKRLD------------------------ 181 (309)
T ss_pred CceeeeecHHHHHHHHhc-C-----------CCCcEEEEECCCcHHHHHHHHHHhC------------------------
Confidence 999999999999988543 1 123569999999988 888887532
Q ss_pred CCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccCcHHHHHHHH
Q psy15568 1065 PSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAA 1144 (1231)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~~~~ 1144 (1231)
.+..+++|+|.. .+....+.+.|+++||+|||||||++||+|+.+++
T Consensus 182 ----------~~~~~~~k~r~~-----------------------~~~~~~~~~~~~~~g~~vliVDDii~TG~T~~~a~ 228 (309)
T PRK01259 182 ----------ADLAIIDKRRPR-----------------------ANVSEVMNIIGDVEGRDCILVDDMIDTAGTLCKAA 228 (309)
T ss_pred ----------CCEEEEEeeccc-----------------------ceeEEEEeecccCCCCEEEEEecccCcHHHHHHHH
Confidence 233445666643 23334566789999999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCCCCccccc
Q psy15568 1145 EVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLF 1224 (1231)
Q Consensus 1145 ~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~~s~~~l~ 1224 (1231)
+.|+++|+++|+++||||+|++++.++|.+++++++++|||+|++.+.+.++|++++|+|++||++|+++|.++|++.||
T Consensus 229 ~~l~~~Ga~~v~~~~tH~i~~~~a~~~l~~~~~~~iv~t~ti~~~~~~~~~~k~~~isva~~ia~~i~~~~~~~s~~~l~ 308 (309)
T PRK01259 229 EALKERGAKSVYAYATHPVLSGGAIERIENSVIDELVVTDSIPLSEEAKKCDKIRVLSVAPLLAEAIRRISNEESVSSLF 308 (309)
T ss_pred HHHHccCCCEEEEEEEeeeCChHHHHHHhcCCCCEEEEecCcccchhhccCCCeEEEEcHHHHHHHHHHHhcCCChHHhc
Confidence 99999999999999999999999999999899999999999999865556789999999999999999999999999998
Q ss_pred c
Q psy15568 1225 R 1225 (1231)
Q Consensus 1225 ~ 1225 (1231)
+
T Consensus 309 ~ 309 (309)
T PRK01259 309 D 309 (309)
T ss_pred C
Confidence 4
No 20
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional
Probab=100.00 E-value=2e-34 Score=326.66 Aligned_cols=213 Identities=22% Similarity=0.306 Sum_probs=175.0
Q ss_pred CCCeEEEEEEecCCCC--ceeEEEEEEEEecCCCCCc----cccC------------cCeEEeeccc--cccccCccccc
Q psy15568 927 SSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDTRPF----RSVK------------TPLVTVKLCA--AEEIQGFFDCP 986 (1231)
Q Consensus 927 ~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~~p~----~~~~------------~~~it~dlhs--s~~i~~ff~ip 986 (1231)
|++.|||+++.|++++ ++++++++|||+|++++.+ ++++ .+++++|+|+ ..+++|||+||
T Consensus 62 n~~l~elll~~~alr~~~a~~i~~ViPY~~YaRqDr~~~~ge~isak~vA~ll~~~~d~vit~DlH~~~~~~~~~~f~ip 141 (301)
T PRK07199 62 DEKLLPLLFAAEAARELGARRVGLVAPYLAYMRQDIAFHPGEAISQRHFARLLSGSFDRLVTVDPHLHRYPSLSEVYPIP 141 (301)
T ss_pred cHHHHHHHHHHHHHHHcCCCeEEEEeecccccccccccCCCCCccHHHHHHHHHhhcCeEEEEeccchhhHHhcCcccCC
Confidence 6789999999999998 6899999999888775443 3333 2249999997 47999999999
Q ss_pred cccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCCCC
Q psy15568 987 VDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIAPP 1065 (1231)
Q Consensus 987 ~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1231)
++++...+.+.+++.+.. ..+.+++||.|+.+ ++.+++.+
T Consensus 142 ~~nl~~~~~la~~l~~~~-------------~~~vVVsPd~g~~~~a~~la~~l-------------------------- 182 (301)
T PRK07199 142 AVVLSAAPAIAAWIRAHV-------------PRPLLIGPDEESEQWVAAVAERA-------------------------- 182 (301)
T ss_pred ccccchHHHHHHHHHhcC-------------CCcEEEEeCCChHHHHHHHHHHh--------------------------
Confidence 999999999998885431 23569999999977 77776642
Q ss_pred CCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCC-ceeccCCCCCEEEEEecccCcHHHHHHHH
Q psy15568 1066 SSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPP-ISVVGDVGGRVAIMVDDMVDDVHSFVAAA 1144 (1231)
Q Consensus 1066 ~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~~v~gk~~iivDDii~tG~T~~~~~ 1144 (1231)
+.+.++++|+|... +..+. +...++++||+|||||||||||+||.+++
T Consensus 183 --------~~~~~~~~K~R~~~-----------------------~~~~~~~~~~~~v~Gr~vIIVDDIidTG~Tl~~aa 231 (301)
T PRK07199 183 --------GAPHAVLRKTRHGD-----------------------RDVEISLPDAAPWAGRTPVLVDDIVSTGRTLIEAA 231 (301)
T ss_pred --------CCCEEEEEEEecCC-----------------------CeEEEEeccCcccCCCEEEEEecccCcHHHHHHHH
Confidence 22345667777642 11111 12346799999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCC
Q psy15568 1145 EVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNK 1217 (1231)
Q Consensus 1145 ~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~ 1217 (1231)
+.||++||++|+++||||+|+++|.++|.++++++|++|||||++. +++|+|++||++|+++|++
T Consensus 232 ~~Lk~~GA~~V~~~~tHgvfs~~a~~~l~~~~i~~iv~Tdti~~~~--------~~~sva~lla~~i~~~~~~ 296 (301)
T PRK07199 232 RQLRAAGAASPDCVVVHALFAGDAYSALAAAGIARVVSTDTVPHPS--------NAISLAPLLAEALRREFDD 296 (301)
T ss_pred HHHHHCCCcEEEEEEEeeeCChHHHHHHHhCCCCEEEEeCCccCCC--------CEEehHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999874 4799999999999999874
No 21
>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A ....
Probab=100.00 E-value=2.8e-34 Score=295.58 Aligned_cols=175 Identities=50% Similarity=0.757 Sum_probs=115.5
Q ss_pred CCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCCCCCCCcccccccccc-----cccccCCCCCCCCC
Q psy15568 1019 CPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIAPPSSPAVDLVTKTMP-----SVDGRASPPPPPVL 1092 (1231)
Q Consensus 1019 ~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~k~r~~~~~~~~ 1092 (1231)
+..|++||.|+.+ |.+++..++. . ++++++++. ..+++.++|.
T Consensus 4 naVIVa~~~g~akRAts~Ad~L~l-~--------------------------~avih~e~~~~~~~~~~~~~s~p~---- 52 (184)
T PF14572_consen 4 NAVIVAKDPGGAKRATSFADRLRL-G--------------------------FAVIHGERRDSESDGVDGRHSPPM---- 52 (184)
T ss_dssp GEEEEESSGGGHHHHHHHHHHCT--E--------------------------EEEE------------------------
T ss_pred CCEEEeCCCCchHhHHHHHHHhCC-C--------------------------eeEecCccccccccccccccCCCc----
Confidence 3569999999977 7777665332 0 334444431 1223333221
Q ss_pred CCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhh
Q psy15568 1093 PPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLI 1172 (1231)
Q Consensus 1093 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l 1172 (1231)
..+......+.+|....++...+.++|||+||+|||||||||||+|++++++.||++||++|++++|||+|+++|.++|
T Consensus 53 -~~~~~~~~~~~~~~~~~~e~~~~~vVGDV~gk~~IIvDDiIdtg~Tl~~aA~~Lk~~GA~~V~~~aTHgvfs~~A~~~l 131 (184)
T PF14572_consen 53 -SRSAAVSSSEEIPEMTPKEKPPMNVVGDVKGKICIIVDDIIDTGGTLIKAAELLKERGAKKVYACATHGVFSGDAPERL 131 (184)
T ss_dssp -----------------------EEEES--TTSEEEEEEEEESSTHHHHHHHHHHHHTTESEEEEEEEEE---TTHHHHH
T ss_pred -cccccccccchhhhcccCcccceEEEEEccCCeEeeecccccchHHHHHHHHHHHHcCCCEEEEEEeCcccCchHHHHH
Confidence 1123345566677777788888999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCCCCcccccc
Q psy15568 1173 EESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLFR 1225 (1231)
Q Consensus 1173 ~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~~s~~~l~~ 1225 (1231)
+++.|++||+|||||++.+..+++||+++||+++|||+|+|+|+++|+|.||.
T Consensus 132 ~~s~Id~vvvTnTIp~~~~~~~~~Ki~vldis~llaeaI~rih~~eSvs~LFr 184 (184)
T PF14572_consen 132 EESPIDEVVVTNTIPQEEQKLQCPKIKVLDISPLLAEAIRRIHNGESVSYLFR 184 (184)
T ss_dssp HHSSESEEEEETTS--HHHHHH-TTEEEE--HHHHHHHHHHHHHTHTSCCGGS
T ss_pred hhcCCeEEEEeccccCchhhhcCCCEeEeehHHHHHHHHHHHHcCCCHHHhcC
Confidence 99999999999999998666789999999999999999999999999999995
No 22
>PLN02297 ribose-phosphate pyrophosphokinase
Probab=99.98 E-value=5.5e-33 Score=314.51 Aligned_cols=214 Identities=17% Similarity=0.177 Sum_probs=170.7
Q ss_pred CCeEEEEEEecCCCC--ceeEEEEEEEEecCCC----CCccccC------------------cCeEEeeccccccccCcc
Q psy15568 928 SRTLEVVLLNDPNRP--LHNVTIVTESYAWNDT----RPFRSVK------------------TPLVTVKLCAAEEIQGFF 983 (1231)
Q Consensus 928 ~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~----~p~~~~~------------------~~~it~dlhss~~i~~ff 983 (1231)
++.|||+++.|++++ +++|++++|||+|+|+ .++++++ .+++++|+| +.|+++||
T Consensus 79 d~lmELLl~~dAlr~~ga~~i~~ViPY~~YaRQDr~~~~ge~isak~vA~ll~~~~~~~~g~d~vitvDlH-~~~~~~fF 157 (326)
T PLN02297 79 AVIFEQLSVIYALPKLFVASFTLVLPFFPTGTSERVEREGDVATAFTLARILSNIPISRGGPTSLVIFDIH-ALQERFYF 157 (326)
T ss_pred hHHHHHHHHHHHHHHcCCCEEEEEeeCChhhcCCCCCCCCCCchHHHHHHHHhcccccccCCCEEEEEeCC-ChHHCCcc
Confidence 679999999999997 6899999999777663 3333322 346999999 58999999
Q ss_pred ccccccc--cCchHHHHHHHhccccccCccccccccCCCcEEeecchhhHHHHHHHhhcccchhhhhhccCCCCCCCCCC
Q psy15568 984 DCPVDNL--RASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLFRNVDGRASPPPSS 1061 (1231)
Q Consensus 984 ~ip~~~l--~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1231)
++|++++ .+.+.|.+|+..... ..++.+++||.|+ .+++. ++
T Consensus 158 ~~~~~~l~l~a~~~l~~~i~~~~~-----------~~~~vvVsPD~Ga-----~~ra~---~~----------------- 201 (326)
T PLN02297 158 GDNVLPCFESGIPLLKKRLQQLPD-----------SDNIVIAFPDDGA-----WKRFH---KQ----------------- 201 (326)
T ss_pred CCcccchhhccHHHHHHHHHhccc-----------cCCcEEEecCccH-----HHHHH---HH-----------------
Confidence 9998865 788999988854211 1235699999999 33320 00
Q ss_pred CCCCCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccCcHHHHH
Q psy15568 1062 IAPPSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFV 1141 (1231)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~ 1141 (1231)
+ .+++.++++|+|.. +....+.+.|+++||+|||||||||||+||.
T Consensus 202 ---------a-~~~~~~~~~K~R~g------------------------~~~~~~~~~~dv~gr~vlIVDDIidTG~Tl~ 247 (326)
T PLN02297 202 ---------F-EHFPMVVCTKVREG------------------------DKRIVRIKEGNPAGRHVVIVDDLVQSGGTLI 247 (326)
T ss_pred ---------c-CCCCEEEEEeEECC------------------------CceEEEecccccCCCeEEEEecccCcHHHHH
Confidence 0 13355777887753 2222345678999999999999999999999
Q ss_pred HHHHHHHhcCCCeEEEEEEecCCCCChhhhhhc------CCCCEEEEeCCccCCccc-ccCCCeEEEechHHHHHHHH
Q psy15568 1142 AAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEE------SPIDEVVVTNTIPHDVQK-LQCPKIKTVDISILLSEAIR 1212 (1231)
Q Consensus 1142 ~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~------~~~~~i~~t~ti~~~~~~-~~~~~~~~~~~a~l~a~~i~ 1212 (1231)
++++.|+++||++|+++||||+|+++|.++|.+ +++++|++|||||+++.. ..++|++++|++++||++|.
T Consensus 248 ~aa~~L~~~Ga~~V~~~~THglfs~~a~~~l~~~~~~~~~~i~~iv~TdTip~~~~~~~~~~k~~~isva~llAe~i~ 325 (326)
T PLN02297 248 ECQKVLAAHGAAKVSAYVTHGVFPNESWERFTHDNGGPEAGFAYFWITDSCPQTVKAVRGKAPFEVLSLAGSIADALQ 325 (326)
T ss_pred HHHHHHHHCCCcEEEEEEECcccChhHHHHHHhcccccccCcCEEEEcCCccCChhhcccCCCcEEEEcHHHHHHHhc
Confidence 999999999999999999999999999999987 489999999999997542 44689999999999999985
No 23
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=99.97 E-value=4.3e-31 Score=301.95 Aligned_cols=229 Identities=34% Similarity=0.564 Sum_probs=191.0
Q ss_pred ecCCCeEEEEEEecCCCC--ceeEEEEEEEEecCCCCCc----cccC-------------cCeEEeeccccccccCcccc
Q psy15568 925 NVSSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDTRPF----RSVK-------------TPLVTVKLCAAEEIQGFFDC 985 (1231)
Q Consensus 925 ~~~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~~p~----~~~~-------------~~~it~dlhss~~i~~ff~i 985 (1231)
+.|++.|||+++.+++++ ++++++++||++|+|++.+ ++++ .+++++|+| +.++++||++
T Consensus 60 ~~~~~l~el~~~~~a~r~~ga~~i~~v~PYl~Y~RqDr~~~~ge~is~~~~a~ll~~~g~d~vit~DlH-s~~~~~~f~i 138 (308)
T TIGR01251 60 PVNDNLMELLIMIDALKRASAKSITAVIPYYGYARQDKKFKSREPISAKLVANLLETAGADRVLTVDLH-SPQIQGFFDV 138 (308)
T ss_pred CccHHHHHHHHHHHHHHHcCCCeEEEEEEecccchhccccCCCCCchHHHHHHHHHHcCCCEEEEecCC-hHHhcCcCCC
Confidence 357889999999999997 6899999999777774433 3333 224999999 5899999999
Q ss_pred ccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCCC
Q psy15568 986 PVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIAP 1064 (1231)
Q Consensus 986 p~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1231)
|++++.+.+.+.+++.+.. ...+.+++||.|+.. |..+++.++
T Consensus 139 p~~~l~a~~~l~~~i~~~~------------~~~~viv~pd~g~~~~A~~lA~~Lg------------------------ 182 (308)
T TIGR01251 139 PVDNLYASPVLAEYLKKKI------------LDNPVVVSPDAGGVERAKKVADALG------------------------ 182 (308)
T ss_pred ceecccCHHHHHHHHHhhC------------CCCCEEEEECCchHHHHHHHHHHhC------------------------
Confidence 9999999999998886542 124679999999987 888877522
Q ss_pred CCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccCcHHHHHHHH
Q psy15568 1065 PSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAA 1144 (1231)
Q Consensus 1065 ~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~~~~ 1144 (1231)
++...+.|+|..+ .++.....+.|+++||+|||||||++||+|+.+++
T Consensus 183 ----------~~~~~i~k~r~~~----------------------~~~~~~~~~~~~v~g~~vliVDDii~tG~Tl~~a~ 230 (308)
T TIGR01251 183 ----------CPLAIIDKRRISA----------------------TNEVEVMNLVGDVEGKDVVIVDDIIDTGGTIAKAA 230 (308)
T ss_pred ----------CCEEEEEEEecCC----------------------CCEEEEEecccccCCCEEEEEccccCCHHHHHHHH
Confidence 2345566776521 12223345678999999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCCCCccccc
Q psy15568 1145 EVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLF 1224 (1231)
Q Consensus 1145 ~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~~s~~~l~ 1224 (1231)
+.|++.||++|++++||++|++++.++|.++++++|++|||+|+. ..++|+..+|++++||++|+++|.++|++.||
T Consensus 231 ~~l~~~ga~~v~~~~th~v~~~~a~~~l~~~~~~~iv~tdt~~~~---~~~~~~~~v~va~~la~~i~~~~~~~s~~~~~ 307 (308)
T TIGR01251 231 EILKSAGAKRVIAAATHGVFSGPAIERIANAGVEEVIVTNTIPHE---KHKPKVSVISVAPLIAEAIRRIHNNESVSSLF 307 (308)
T ss_pred HHHHhcCCCEEEEEEEeeecCcHHHHHHHhCCCCEEEEeCCCCcc---ccCCCcEEEEhHHHHHHHHHHHhcCCChHHhc
Confidence 999999999999999999999999999999999999999999985 35779999999999999999999999999998
Q ss_pred c
Q psy15568 1225 R 1225 (1231)
Q Consensus 1225 ~ 1225 (1231)
.
T Consensus 308 ~ 308 (308)
T TIGR01251 308 D 308 (308)
T ss_pred C
Confidence 4
No 24
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.96 E-value=2.3e-30 Score=292.65 Aligned_cols=211 Identities=23% Similarity=0.409 Sum_probs=170.1
Q ss_pred eeecCCCeEEEEEEecCCCC--ceeEEEEEEEEecCCCCC----ccccC------------cCeEEeeccccccccCccc
Q psy15568 923 VFNVSSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDTRP----FRSVK------------TPLVTVKLCAAEEIQGFFD 984 (1231)
Q Consensus 923 ~~~~~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~~p----~~~~~------------~~~it~dlhss~~i~~ff~ 984 (1231)
..+.|++.|||+++.+++++ ++++++++|||+|+|+.. +++++ .+++|+|+| +.++++||+
T Consensus 55 ~~~~~d~l~ell~~~~alr~~ga~~i~~v~PY~~YaRqDr~~~~ge~isak~~a~ll~~~~d~vitvD~H-~~~~~~~f~ 133 (285)
T PRK00934 55 TYPQDENLVELLLLIDALRDEGAKSITLVIPYLGYARQDKRFKPGEPISARAIAKIISAYYDRIITINIH-EPSILEFFP 133 (285)
T ss_pred CCCCcHHHHHHHHHHHHHHHcCCCeEEEEecCCcccccccccCCCCCccHHHHHHHHHHhcCEEEEEcCC-hHHHcCcCC
Confidence 34556779999999999998 799999999977777433 34444 234999999 588999999
Q ss_pred cccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCC
Q psy15568 985 CPVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIA 1063 (1231)
Q Consensus 985 ip~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1063 (1231)
+|++++.+.+.+.+++.... ..+.+++||.|+.. |..+++.++
T Consensus 134 ~~~~~l~a~~~la~~i~~~~-------------~~~vvv~pd~Ga~~~a~~lA~~l~----------------------- 177 (285)
T PRK00934 134 IPFINLDAAPLIAEYIGDKL-------------DDPLVLAPDKGALELAKEAAEILG----------------------- 177 (285)
T ss_pred CcEeEeecHHHHHHHHHhcC-------------CCCEEEEeCCchHHHHHHHHHHhC-----------------------
Confidence 99999999999888873221 23569999999988 888877532
Q ss_pred CCCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccCcHHHHHHH
Q psy15568 1064 PPSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAA 1143 (1231)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~~~ 1143 (1231)
.+...+.|+|..+. ........++++||+|||||||+|||+|+.++
T Consensus 178 -----------~~~~~i~k~r~~~~-----------------------~~~~~~~~~~v~Gk~VlIVDDIi~TG~Tl~~a 223 (285)
T PRK00934 178 -----------CEYDYLEKTRISPT-----------------------EVEIAPKNLDVKGKDVLIVDDIISTGGTMATA 223 (285)
T ss_pred -----------CCEEEEEEEecCCC-----------------------eEEEeccccccCCCEEEEEcCccccHHHHHHH
Confidence 22345566664321 00111223589999999999999999999999
Q ss_pred HHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHH
Q psy15568 1144 AEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIR 1212 (1231)
Q Consensus 1144 ~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~ 1212 (1231)
++.|+++||++|+++||||+|++++.++|.++++++|++|||+|++ ++++|++++||++|+
T Consensus 224 a~~Lk~~GA~~V~~~~~H~i~~~~a~~~l~~~~i~~i~~tnti~~~--------~~~~~va~~la~~i~ 284 (285)
T PRK00934 224 IKILKEQGAKKVYVACVHPVLVGDAILKLYNAGVDEIIVTDTLESE--------VSKISVAPLIADLLK 284 (285)
T ss_pred HHHHHHCCCCEEEEEEEeeccCcHHHHHHHhCCCCEEEEcCCCCCC--------ceEEEcHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999853 579999999999995
No 25
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=99.96 E-value=1.5e-30 Score=301.80 Aligned_cols=246 Identities=33% Similarity=0.570 Sum_probs=210.8
Q ss_pred CCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEecc
Q psy15568 526 SRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDLH 603 (1231)
Q Consensus 526 ~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDlH 603 (1231)
+..+||+++.|+++ +.+++++++||++|++|++ ++.+|++|++|++|+||+++|+|+|||||+|
T Consensus 181 d~LmELLllidAlr~agAkrItlViPYl~YaRQDR--------------~~~~gepIsak~vA~lL~~~G~d~VitvDlH 246 (439)
T PTZ00145 181 ENLIELLLMISTCRRASAKKITAVIPYYGYARQDR--------------KLSSRVPISAADVARMIEAMGVDRVVAIDLH 246 (439)
T ss_pred HHHHHHHHHHHHHHHhccCeEEEEeecccchheec--------------ccCCCCChhHHHHHHHHHHcCCCeEEEEecC
Confidence 56889999999987 4578999999999999998 7778999999999999999999999999999
Q ss_pred ccccccccC--cccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhC------CcEEEEeccccccccc
Q psy15568 604 QKEIQGFFD--CPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLR------LGIAVIHGEQKESESD 675 (1231)
Q Consensus 604 s~~~~~~F~--~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~------~~~~~~~k~r~~~~~d 675 (1231)
++++++||+ +|++||.+.+.+++||++. +..++|||+||.|+.+||+.+|+.|+ ++++++.|+|+..
T Consensus 247 s~~i~~fF~~~iPvdnl~a~~~~a~~i~~~--~l~~pVVVsPD~Ga~~RAr~~A~~L~~~~~~~~~~avl~K~R~~~--- 321 (439)
T PTZ00145 247 SGQIQGFFGPRVPVDNLEAQLIGLDYFTKK--DLYKPVIVSPDAGGVYRARKFQDGLNHRGISDCGIAMLIKQRTKP--- 321 (439)
T ss_pred hHHHHhhcCCCcccccccccHHHHHHHhhc--CCCccEEEccCcchHHHHHHHHHHhccccccCCCEEEEEeecCCC---
Confidence 999999997 9999999999999999763 46889999999999999999999997 7999999998510
Q ss_pred ccccccCCCcceeeecCCCccccccccccCCccccceeecCCCChhhhHHHHHHHhcCcEEEEeCCCCCCcccccccccc
Q psy15568 676 EYEVDLTGRPDKVYLSGLPDRVLISHVSQIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDEYEVDLT 755 (1231)
Q Consensus 676 ~~~d~~pg~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~v~Rlr~SialW~G~NE~~~~~~~~~~~~ 755 (1231)
+|.
T Consensus 322 ------------------------------------------------------------------~~v----------- 324 (439)
T PTZ00145 322 ------------------------------------------------------------------NEI----------- 324 (439)
T ss_pred ------------------------------------------------------------------Cce-----------
Confidence 000
Q ss_pred cccccCchhhHHhHHHHHHHhHHHHHHhhCCCCCcccCCCCCCcCCcccccccCCCCCCCCCCCCcccCCcCCCCCCCcc
Q psy15568 756 RYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDSGWTGVSSPSPCPAPL 835 (1231)
Q Consensus 756 ~~~~~~~~~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~SSPs~G~~~~~~~~~~~~~p~~~~~Gd~~~~~~~~~~p~~~~f 835 (1231)
T Consensus 325 -------------------------------------------------------------------------------- 324 (439)
T PTZ00145 325 -------------------------------------------------------------------------------- 324 (439)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCCCccccCCCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEecCCCCchhHHHHHHhhc
Q psy15568 836 LSYHGDGSKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDYDGNWKMLHYFARKFF 915 (1231)
Q Consensus 836 ~s~~g~~~~~s~~~~~~g~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~GsliDy~GrwK~lhY~akr~~ 915 (1231)
..+.+.|++.|+.++|+||+++++.+++.+++.++..|++++++.+|||+|.+-.
T Consensus 325 -----------~~~~lvgdV~Gk~vIIVDDIIdTG~Tl~~aa~~Lk~~GA~~V~~~~THglfs~~A-------------- 379 (439)
T PTZ00145 325 -----------EKMDLVGNVYDSDVIIVDDMIDTSGTLCEAAKQLKKHGARRVFAFATHGLFSGPA-------------- 379 (439)
T ss_pred -----------EEEeccCCCCCCEEEEEcceeCcHHHHHHHHHHHHHcCCCEEEEEEEcccCChhH--------------
Confidence 0123457889999999999999999999999999999999999999999987410
Q ss_pred ccccccceeecCCCeEEEEEEecCCCCceeEEEEEEEEecCCCCCccccCcCeEEeeccccccccCccccccccccCchH
Q psy15568 916 APVLISPVFNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWNDTRPFRSVKTPLVTVKLCAAEEIQGFFDCPVDNLRASPF 995 (1231)
Q Consensus 916 aPvlV~~~~~~~~~~leL~lvnDa~~~a~~i~v~ip~y~~~~~~p~~~~~~~~it~dlhss~~i~~ff~ip~~~l~~~~~ 995 (1231)
.+.|..+++
T Consensus 380 -----------------------------------------------------------------------~~rl~~s~i 388 (439)
T PTZ00145 380 -----------------------------------------------------------------------IERIEASPL 388 (439)
T ss_pred -----------------------------------------------------------------------HHHHhcCCC
Confidence 123333443
Q ss_pred HHHHHHhccccccCccccccccCCCcEEeecchhhHHHHHHHhhcccchhhhhh
Q psy15568 996 LLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLFR 1049 (1231)
Q Consensus 996 l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~a~~i~~~~~~~~~~~~~~ 1049 (1231)
+++++||++|++......+++..+|++.++|++|+++|+.++++.+|.
T Consensus 389 ------~~IvvTdTIp~~~~~~~~~k~~visVA~llAeaI~~i~~~~s~s~lf~ 436 (439)
T PTZ00145 389 ------EEVVVTDTVKSNKNIDSCKKITKLSVSVLVADAIRRIHQKESLNDLFN 436 (439)
T ss_pred ------CEEEEeCCCcCchhhcccCCeEEEEhHHHHHHHHHHHhcCCCHHHHhC
Confidence 788999999876543446889999999999999999999999988886
No 26
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.96 E-value=3e-30 Score=293.89 Aligned_cols=247 Identities=36% Similarity=0.578 Sum_probs=208.3
Q ss_pred CCCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeeccccc-ccchHHHHHHHHhhccCcceEEEEe
Q psy15568 525 SSRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRK-RGCIVSKLLAKMMCTSGLKHIITMD 601 (1231)
Q Consensus 525 ~~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~-~e~i~ak~va~ll~~~g~d~vitvD 601 (1231)
++..++|+++-|+++ ..+++++++||++|++|++ ++.+ ++++++|++|+||+++|+|+|+|||
T Consensus 67 nd~lmeLl~~~~alr~~~a~~i~~ViPYl~YaRQDr--------------~~~~~~~~isak~va~ll~~~g~d~vitvD 132 (319)
T PRK04923 67 AENLMELLVLIDALKRASAASVTAVIPYFGYSRQDR--------------RMRSSRVPITAKVAAKMISAMGADRVLTVD 132 (319)
T ss_pred chHHHHHHHHHHHHHHcCCcEEEEEeeccccccccc--------------cccCCCCCccHHHHHHHHHhcCCCEEEEEe
Confidence 366889999998887 4468999999999999988 6644 7799999999999999999999999
Q ss_pred ccccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhC-CcEEEEecccccccccccccc
Q psy15568 602 LHQKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLR-LGIAVIHGEQKESESDEYEVD 680 (1231)
Q Consensus 602 lHs~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~-~~~~~~~k~r~~~~~d~~~d~ 680 (1231)
+|++++++||++|++||++.+++++||.+.. +.++++|||||.|+.+||+.+|+.|+ +++++++|.|..
T Consensus 133 ~H~~~~~~~f~~p~~~l~~~~~l~~~i~~~~-~~~~~vVVsPD~Ga~~rA~~lA~~L~~~~~~~~~K~R~~--------- 202 (319)
T PRK04923 133 LHADQIQGFFDVPVDNVYASPLLLADIWRAY-GTDNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPR--------- 202 (319)
T ss_pred CChHHHHhhcCCCceeeeChHHHHHHHHHhc-CCCCCEEEEECCchHHHHHHHHHHcCCCCEEEeccccCC---------
Confidence 9999999999999999999999999996532 45889999999999999999999998 899999999851
Q ss_pred cCCCcceeeecCCCccccccccccCCccccceeecCCCChhhhHHHHHHHhcCcEEEEeCCCCCCccccccccccccccc
Q psy15568 681 LTGRPDKVYLSGLPDRVLISHVSQIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDEYEVDLTRYIRE 760 (1231)
Q Consensus 681 ~pg~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~v~Rlr~SialW~G~NE~~~~~~~~~~~~~~~~~ 760 (1231)
.|+.
T Consensus 203 ------------------------------------------------------------~~~~---------------- 206 (319)
T PRK04923 203 ------------------------------------------------------------ANVA---------------- 206 (319)
T ss_pred ------------------------------------------------------------CCce----------------
Confidence 0000
Q ss_pred CchhhHHhHHHHHHHhHHHHHHhhCCCCCcccCCCCCCcCCcccccccCCCCCCCCCCCCcccCCcCCCCCCCccccccC
Q psy15568 761 NPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDSGWTGVSSPSPCPAPLLSYHG 840 (1231)
Q Consensus 761 ~~~~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~SSPs~G~~~~~~~~~~~~~p~~~~~Gd~~~~~~~~~~p~~~~f~s~~g 840 (1231)
T Consensus 207 -------------------------------------------------------------------------------- 206 (319)
T PRK04923 207 -------------------------------------------------------------------------------- 206 (319)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccccCCCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEecCCCCchhHHHHHHhhcccccc
Q psy15568 841 DGSKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDYDGNWKMLHYFARKFFAPVLI 920 (1231)
Q Consensus 841 ~~~~~s~~~~~~g~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~GsliDy~GrwK~lhY~akr~~aPvlV 920 (1231)
..+...|+++|+.++|+||+++++.+++.+++.+++.|++++++.+|||+|.+..
T Consensus 207 ------~~~~~~gdv~Gr~viIVDDIidTG~Tl~~aa~~Lk~~GA~~V~~~~THgvfs~~a------------------- 261 (319)
T PRK04923 207 ------TVMNIIGDVQGKTCVLVDDLVDTAGTLCAAAAALKQRGALKVVAYITHPVLSGPA------------------- 261 (319)
T ss_pred ------EEEecccCCCCCEEEEEecccCchHHHHHHHHHHHHCCCCEEEEEEECcccCchH-------------------
Confidence 0112346788999999999999999999999999999999999999999997410
Q ss_pred cceeecCCCeEEEEEEecCCCCceeEEEEEEEEecCCCCCccccCcCeEEeeccccccccCccccccccccCchHHHHHH
Q psy15568 921 SPVFNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWNDTRPFRSVKTPLVTVKLCAAEEIQGFFDCPVDNLRASPFLLQYI 1000 (1231)
Q Consensus 921 ~~~~~~~~~~leL~lvnDa~~~a~~i~v~ip~y~~~~~~p~~~~~~~~it~dlhss~~i~~ff~ip~~~l~~~~~l~~~l 1000 (1231)
.+.|..+++
T Consensus 262 ------------------------------------------------------------------~~~l~~s~i----- 270 (319)
T PRK04923 262 ------------------------------------------------------------------VDNINNSQL----- 270 (319)
T ss_pred ------------------------------------------------------------------HHHHhhCCC-----
Confidence 123333343
Q ss_pred HhccccccCccccccccCCCcEEeecchhhHHHHHHHhhcccchhhhh
Q psy15568 1001 QDSVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLF 1048 (1231)
Q Consensus 1001 ~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~a~~i~~~~~~~~~~~~~ 1048 (1231)
+++++||++|++......+++..+|+++++|++|+++++.++++.+|
T Consensus 271 -~~iv~Tdtip~~~~~~~~~k~~~isva~lla~~i~~~~~~~s~~~l~ 317 (319)
T PRK04923 271 -DELVVTDTIPLSEAARACAKIRQLSVAELLAETIRRIAFGESVSSLY 317 (319)
T ss_pred -CEEEEeCCccCchhhcccCCeEEEEhHHHHHHHHHHHHcCCCHHHhc
Confidence 78899999987655445689999999999999999999998888776
No 27
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=99.96 E-value=2.4e-29 Score=288.32 Aligned_cols=116 Identities=32% Similarity=0.537 Sum_probs=94.5
Q ss_pred EEECCeeEEEecceecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEEccCCCCCC-hHHHHHHHhHcCCEEEEecccccC
Q psy15568 189 FEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYM-SDYFYETCDELGILIWQDMMFACN 267 (1231)
Q Consensus 189 f~lNG~pvflrG~n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~wggg~~~-~~~fydlcDe~GIlVw~e~~~~~~ 267 (1231)
|+|||+|++|||+|+|+..+..|++.+++.++++|+++|++|+|+||+ +|+| +++||++|||+|||||+|+|..+.
T Consensus 8 ~~lNGk~~~l~Gv~~h~~~~~~g~a~~~~~~~~d~~l~k~~G~N~iR~---~h~p~~~~~~~~cD~~GilV~~e~~~~~~ 84 (298)
T PF02836_consen 8 FYLNGKPIFLRGVNRHQDYPGLGRAMPDEAMERDLELMKEMGFNAIRT---HHYPPSPRFYDLCDELGILVWQEIPLEGH 84 (298)
T ss_dssp EEETTEEE-EEEEEE-S-BTTTBT---HHHHHHHHHHHHHTT-SEEEE---TTS--SHHHHHHHHHHT-EEEEE-S-BSC
T ss_pred EEECCEEEEEEEEeeCcCcccccccCCHHHHHHHHHHHHhcCcceEEc---ccccCcHHHHHHHhhcCCEEEEecccccc
Confidence 999999999999999999999999888899999999999999999999 5776 469999999999999999988332
Q ss_pred C----------CCCCHHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 268 N----------YPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 268 ~----------~~~~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
. ...++.|.+.+++++++||+|+||||||++||++||...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~NHPSIi~W~~gNE~~~ 134 (298)
T PF02836_consen 85 GSWQDFGNCNYDADDPEFRENAEQELREMVRRDRNHPSIIMWSLGNESDY 134 (298)
T ss_dssp TSSSSTSCTSCTTTSGGHHHHHHHHHHHHHHHHTT-TTEEEEEEEESSHH
T ss_pred CccccCCccccCCCCHHHHHHHHHHHHHHHHcCcCcCchheeecCccCcc
Confidence 1 124788999999999999999999999999999999954
No 28
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.95 E-value=1.6e-29 Score=289.09 Aligned_cols=249 Identities=31% Similarity=0.531 Sum_probs=209.4
Q ss_pred CCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEecc
Q psy15568 526 SRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDLH 603 (1231)
Q Consensus 526 ~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDlH 603 (1231)
++.+++.++-|+++ ..+++++++||++|++|++ ++++|+++++|++|+||+++|+|+|+|+|+|
T Consensus 67 d~lmelll~~~alr~~~a~~i~~V~PYl~YaRQDr--------------~~~~~e~isak~~a~ll~~~g~d~vit~D~H 132 (320)
T PRK02269 67 DNLMEILIMVDALKRASAESINVVMPYYGYARQDR--------------KARSREPITSKLVANMLEVAGVDRLLTVDLH 132 (320)
T ss_pred chHHHHHHHHHHHHHhCCCeEEEEEeccccchhhc--------------ccCCCCCchHHHHHHHHhhcCCCEEEEECCC
Confidence 56789999998887 4468999999999999998 7888999999999999999999999999999
Q ss_pred ccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccccccccccccccCC
Q psy15568 604 QKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDEYEVDLTG 683 (1231)
Q Consensus 604 s~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~~~~~d~~~d~~pg 683 (1231)
++++++||++|++|+++.|++++|+++...+.++++|||||.|+.+||+.+|+.|++++++++|+|...
T Consensus 133 ~~~~~~~f~~p~~~l~~~p~l~~~i~~~~~~~~~~vvVsPd~G~~~~A~~lA~~lg~~~~~~~k~r~~~----------- 201 (320)
T PRK02269 133 AAQIQGFFDIPVDHLMGAPLIADYFDRRGLVGDDVVVVSPDHGGVTRARKLAQFLKTPIAIIDKRRSVD----------- 201 (320)
T ss_pred hHHHhccccCCchhhhhHHHHHHHHHHhCCCCCCcEEEEECccHHHHHHHHHHHhCCCEEEEEecccCC-----------
Confidence 999999999999999999999999976533457899999999999999999999999999999877410
Q ss_pred CcceeeecCCCccccccccccCCccccceeecCCCChhhhHHHHHHHhcCcEEEEeCCCCCCcccccccccccccccCch
Q psy15568 684 RPDKVYLSGLPDRVLISHVSQIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDEYEVDLTRYIRENPE 763 (1231)
Q Consensus 684 ~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~v~Rlr~SialW~G~NE~~~~~~~~~~~~~~~~~~~~ 763 (1231)
+ .|+.
T Consensus 202 ~--------------------------------------------------------~~~~------------------- 206 (320)
T PRK02269 202 K--------------------------------------------------------MNTS------------------- 206 (320)
T ss_pred C--------------------------------------------------------Ccee-------------------
Confidence 0 0000
Q ss_pred hhHHhHHHHHHHhHHHHHHhhCCCCCcccCCCCCCcCCcccccccCCCCCCCCCCCCcccCCcCCCCCCCccccccCCCC
Q psy15568 764 LYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDSGWTGVSSPSPCPAPLLSYHGDGS 843 (1231)
Q Consensus 764 ~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~SSPs~G~~~~~~~~~~~~~p~~~~~Gd~~~~~~~~~~p~~~~f~s~~g~~~ 843 (1231)
T Consensus 207 -------------------------------------------------------------------------------- 206 (320)
T PRK02269 207 -------------------------------------------------------------------------------- 206 (320)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccCCCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEecCCCCchhHHHHHHhhcccccccce
Q psy15568 844 KEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDYDGNWKMLHYFARKFFAPVLISPV 923 (1231)
Q Consensus 844 ~~s~~~~~~g~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~GsliDy~GrwK~lhY~akr~~aPvlV~~~ 923 (1231)
..+...|+++|+.++|+||+++++.++..+++.+++.|++.+++.+|||+|.+-.
T Consensus 207 ---~~~~~~gdv~Gr~viIVDDIidTG~Tl~~aa~~Lk~~GA~~V~~~~tHglf~~~a---------------------- 261 (320)
T PRK02269 207 ---EVMNIIGNVKGKKCILIDDMIDTAGTICHAADALAEAGATEVYASCTHPVLSGPA---------------------- 261 (320)
T ss_pred ---EEEEeccccCCCEEEEEeeecCcHHHHHHHHHHHHHCCCCEEEEEEECcccCchH----------------------
Confidence 0112346778999999999999999999999999999999999999999987510
Q ss_pred eecCCCeEEEEEEecCCCCceeEEEEEEEEecCCCCCccccCcCeEEeeccccccccCccccccccccCchHHHHHHHhc
Q psy15568 924 FNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWNDTRPFRSVKTPLVTVKLCAAEEIQGFFDCPVDNLRASPFLLQYIQDS 1003 (1231)
Q Consensus 924 ~~~~~~~leL~lvnDa~~~a~~i~v~ip~y~~~~~~p~~~~~~~~it~dlhss~~i~~ff~ip~~~l~~~~~l~~~l~~~ 1003 (1231)
.+.|..+++ ++
T Consensus 262 ---------------------------------------------------------------~~~l~~~~i------~~ 272 (320)
T PRK02269 262 ---------------------------------------------------------------LDNIQKSAI------EK 272 (320)
T ss_pred ---------------------------------------------------------------HHHHHhCCC------CE
Confidence 112333333 77
Q ss_pred cccccCccccccccCCCcEEeecchhhHHHHHHHhhcccchhhhhh
Q psy15568 1004 VVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLFR 1049 (1231)
Q Consensus 1004 ~~~~n~v~~~~~~~~~p~l~~pD~g~~~a~~i~~~~~~~~~~~~~~ 1049 (1231)
+++||++|++... ..+++..+|+++++|++|+++|+.++++.+|.
T Consensus 273 iv~Tdti~~~~~~-~~~k~~~isva~~la~~i~~~~~~~s~~~~~~ 317 (320)
T PRK02269 273 LVVLDTIYLPEER-LIDKIEQISIADLLGEAIIRIHEKRPLSPLFE 317 (320)
T ss_pred EEEeCCCCCcccc-ccCCeEEEEhHHHHHHHHHHHHcCCCHHHHhc
Confidence 8999999776442 35789999999999999999999999988886
No 29
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.95 E-value=2e-29 Score=288.72 Aligned_cols=250 Identities=29% Similarity=0.471 Sum_probs=208.5
Q ss_pred CCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEecc
Q psy15568 526 SRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDLH 603 (1231)
Q Consensus 526 ~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDlH 603 (1231)
+..+|++++-|+++ +.+++++++||++|++|++ ++++|+++++|++|+||+.+|+|+|+|||+|
T Consensus 71 d~l~eLll~~~alr~~~a~~i~~ViPYl~YaRQDr--------------~~~~~e~isak~vA~ll~~~g~d~vit~DlH 136 (332)
T PRK00553 71 DSLMELLIAIDALKRGSAKSITAILPYYGYARQDR--------------KTAGREPITSKLVADLLTKAGVTRVTLTDIH 136 (332)
T ss_pred hHHHHHHHHHHHHHHcCCCeEEEEeeccccchhhc--------------ccCCCCCccHHHHHHHHHhcCCCEEEEEeCC
Confidence 56889999988887 4468999999999999998 7788999999999999999999999999999
Q ss_pred ccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccccccccccccccCC
Q psy15568 604 QKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDEYEVDLTG 683 (1231)
Q Consensus 604 s~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~~~~~d~~~d~~pg 683 (1231)
++++++||++|++||++.++|++|+.+.. +.++++||+||.|+.+||+.+|+.|++++++++|+|...
T Consensus 137 ~~~i~~~F~ipv~~l~a~~~~~~~~~~~~-~~~~~vvVsPD~gg~~rA~~lA~~lg~~~~vi~K~r~~~----------- 204 (332)
T PRK00553 137 SDQTQGFFDIPVDILRTYHVFLSRVLELL-GKKDLVVVSPDYGGVKRARLIAESLELPLAIIDKRRPKH----------- 204 (332)
T ss_pred hHHHHhhcCCCcceeechHHHHHHHHHhc-CCCCeEEEEECCCcHHHHHHHHHHhCCCEEEEEEecCCc-----------
Confidence 99999999999999999999999997632 467899999999999999999999999999999988410
Q ss_pred CcceeeecCCCccccccccccCCccccceeecCCCChhhhHHHHHHHhcCcEEEEeCCCCCCcccccccccccccccCch
Q psy15568 684 RPDKVYLSGLPDRVLISHVSQIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDEYEVDLTRYIRENPE 763 (1231)
Q Consensus 684 ~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~v~Rlr~SialW~G~NE~~~~~~~~~~~~~~~~~~~~ 763 (1231)
|+.
T Consensus 205 ----------------------------------------------------------~~~------------------- 207 (332)
T PRK00553 205 ----------------------------------------------------------NVA------------------- 207 (332)
T ss_pred ----------------------------------------------------------ceE-------------------
Confidence 000
Q ss_pred hhHHhHHHHHHHhHHHHHHhhCCCCCcccCCCCCCcCCcccccccCCCCCCCCCCCCcccCCcCCCCCCCccccccCCCC
Q psy15568 764 LYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDSGWTGVSSPSPCPAPLLSYHGDGS 843 (1231)
Q Consensus 764 ~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~SSPs~G~~~~~~~~~~~~~p~~~~~Gd~~~~~~~~~~p~~~~f~s~~g~~~ 843 (1231)
T Consensus 208 -------------------------------------------------------------------------------- 207 (332)
T PRK00553 208 -------------------------------------------------------------------------------- 207 (332)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccCCCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEecCCCCchhHHHHHHhhcccccccce
Q psy15568 844 KEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDYDGNWKMLHYFARKFFAPVLISPV 923 (1231)
Q Consensus 844 ~~s~~~~~~g~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~GsliDy~GrwK~lhY~akr~~aPvlV~~~ 923 (1231)
..+...|+++|+.++++||+.+++.++..+++.+++.|++.+++.+|||+|.+..
T Consensus 208 ---~~~~~~gdv~Gk~VIIVDDIi~TG~Tl~~aa~~Lk~~GA~~V~~~atHglf~~~a---------------------- 262 (332)
T PRK00553 208 ---ESINVLGEVKNKNCLIVDDMIDTGGTVIAAAKLLKKQKAKKVCVMATHGLFNKNA---------------------- 262 (332)
T ss_pred ---eeEEeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCcEEEEEEEeeecCchH----------------------
Confidence 0112345778999999999999999999999999999999999999999987510
Q ss_pred eecCCCeEEEEEEecCCCCceeEEEEEEEEecCCCCCccccCcCeEEeeccccccccCccccccccccCchHHHHHHHhc
Q psy15568 924 FNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWNDTRPFRSVKTPLVTVKLCAAEEIQGFFDCPVDNLRASPFLLQYIQDS 1003 (1231)
Q Consensus 924 ~~~~~~~leL~lvnDa~~~a~~i~v~ip~y~~~~~~p~~~~~~~~it~dlhss~~i~~ff~ip~~~l~~~~~l~~~l~~~ 1003 (1231)
.+.+.. .+..+++ ++
T Consensus 263 ----------------------------------------------------~~~l~~-------~~~~~~i------~~ 277 (332)
T PRK00553 263 ----------------------------------------------------IQLFDE-------AFKKKLI------DK 277 (332)
T ss_pred ----------------------------------------------------HHHHHh-------ccccCCC------CE
Confidence 000000 0111233 78
Q ss_pred cccccCccccccccCCCcEEeecchhhHHHHHHHhhcccchhhhhh
Q psy15568 1004 VVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLFR 1049 (1231)
Q Consensus 1004 ~~~~n~v~~~~~~~~~p~l~~pD~g~~~a~~i~~~~~~~~~~~~~~ 1049 (1231)
+++||++|++. ....+++..+|+++++|++|+++|+++|++.+|.
T Consensus 278 iv~Tntip~~~-~~~~~~~~~vsva~~la~~i~~~~~~~s~~~~~~ 322 (332)
T PRK00553 278 LFVSNSIPQTK-FEKKPQFKVVDLAHLYEEVLLCYANGGSISAIYT 322 (332)
T ss_pred EEEeCCccCcc-cccCCCeEEEEhHHHHHHHHHHHhcCCCHHHHHh
Confidence 89999998764 2336899999999999999999999999999998
No 30
>KOG2230|consensus
Probab=99.95 E-value=6.4e-28 Score=273.55 Aligned_cols=238 Identities=26% Similarity=0.385 Sum_probs=184.9
Q ss_pred ChhhhHHHHHHHhc--CcEEEEeCCCCCCccc--ccccccccccccCchhhHHhHHHHHHHhHHHHHHhhCCCCCcccCC
Q psy15568 719 GAAKKATSYAERLR--LGIAVIHGEQKESESD--EYEVDLTRYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSS 794 (1231)
Q Consensus 719 ~~~~Ea~~~v~Rlr--~SialW~G~NE~~~~~--~~~~~~~~~~~~~~~~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~SS 794 (1231)
.+++|+++|+.||. +|+++|.||||++.|. .||+- .......+.+||+.||.++|.+++..-+++||++.||
T Consensus 418 sv~eEV~yn~~Rls~HpSviIfsgNNENEaAl~~nWy~~----sf~~~~~~~kdyvlly~~~i~el~l~~~~srPfi~SS 493 (867)
T KOG2230|consen 418 SVREEVRYNAMRLSHHPSVIIFSGNNENEAALVQNWYGT----SFERDRFESKDYVLLYANVIHELKLVSHSSRPFIVSS 493 (867)
T ss_pred HHHHHHHHHHHhhccCCeEEEEeCCCccHHHHHhhhhcc----cccccchhhhhhhHHHHHHHHHHHhhcCCCCCceecC
Confidence 47899999999998 4999999999998776 67763 2233456889999999999999999999999999999
Q ss_pred CCCCcCCcccccccCCCCCCCCCCCCcccCCcC----CCC-CCCccccccCCCCCCCCC----------------ccc--
Q psy15568 795 PTNGIESEKAKYALADNPYSNIYGDSGWTGVSS----PSP-CPAPLLSYHGDGSKEKPP----------------ISV-- 851 (1231)
Q Consensus 795 Ps~G~~~~~~~~~~~~~p~~~~~Gd~~~~~~~~----~~p-~~~~f~s~~g~~~~~s~~----------------~~~-- 851 (1231)
|+||.++++++| ++.||+++.+||.||.+... +.- ..+||+||+|+++.|+.. ...
T Consensus 494 PsNG~ete~e~~-VS~NP~dn~~GDVHfYdy~~d~W~~~ifp~pRfaSEyG~QS~P~~~t~~~~~~e~Dw~~~sk~~~HR 572 (867)
T KOG2230|consen 494 PSNGKETEPENY-VSSNPQDNQNGDVHFYDYTKDGWDPGIFPRPRFASEYGFQSFPGAYTWQRSKGEDDWLLGSKLITHR 572 (867)
T ss_pred CCCCcccCcccc-ccCCCccccCCceEeeehhhccCCCCcccCchhhhhcCcccCccHHHHHhccCccchhhccceeeee
Confidence 999999999998 89999999999999766433 211 236899999999865521 111
Q ss_pred cCCCCCceee--echh-h--------hhhHHHHHHHHHHHHHHHHHH---Hhh----------hcceeE-----------
Q psy15568 852 VGDVGGRVAI--MVDD-M--------VDDVHSFVAAAEVLKDRGAYK---IYV----------LATHGL----------- 896 (1231)
Q Consensus 852 ~g~~~g~~~~--~~~~-~--------~~~~~~~v~~sq~~qa~~~~~---i~~----------~~t~Gs----------- 896 (1231)
.|.+.|+..+ ++.. + ...+...+|.+|++||.+.|. .|. .+|||+
T Consensus 573 QHHpgGn~~~l~~v~~HlplP~s~~~~~~~k~i~YfsQV~Qa~a~KteTe~YRr~R~t~~~~~g~tMgAlYWQLNDvW~A 652 (867)
T KOG2230|consen 573 QHHPGGNVPVLALVERHLPLPFSENENYATKLIAYFSQVAQAMATKTETELYRRLRDTPHRTLGNTMGALYWQLNDVWVA 652 (867)
T ss_pred ccCCCCcchHHHHHHhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhccchheeeeeeccEEec
Confidence 2334455332 1111 1 245666689999999999871 121 135554
Q ss_pred ----EecCCCCchhHHHHHHhhcccccccceeecCCCeEEEEEEecCCCCceeEEEEEEEEecCC-CCCcccc
Q psy15568 897 ----LFDYDGNWKMLHYFARKFFAPVLISPVFNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWND-TRPFRSV 964 (1231)
Q Consensus 897 ----liDy~GrwK~lhY~akr~~aPvlV~~~~~~~~~~leL~lvnDa~~~a~~i~v~ip~y~~~~-~~p~~~~ 964 (1231)
.|||+|+|||+||+|+|||||+++....+ ++...++++|| .....++++.+...+|+. .+|.+.-
T Consensus 653 PsWssidf~gnWKm~hyea~~ffan~~~~~f~~--e~~f~v~~~~d-~~~l~s~tl~vq~~sW~~~L~P~~~~ 722 (867)
T KOG2230|consen 653 PSWSSIDFYGNWKMDHYEANRFFANVAVYSFAD--ETDFKVFLLND-PVHLWSQTLPVQSTSWDVTLRPNGVQ 722 (867)
T ss_pred CcceeeeccCcccccHHHHHhhhcccccccccc--ccceEEEecCc-hhhhhheeeeeEEeeccccccccccc
Confidence 49999999999999999999999998865 56789999999 555678889999999998 6776643
No 31
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.95 E-value=1.9e-28 Score=279.96 Aligned_cols=245 Identities=29% Similarity=0.505 Sum_probs=205.9
Q ss_pred CCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEecc
Q psy15568 526 SRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDLH 603 (1231)
Q Consensus 526 ~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDlH 603 (1231)
+..++|+++-|+++ ..+++++++||++|++|++ ++++|+++++|++|+||+++|+|+|+|||+|
T Consensus 71 d~l~eLll~~~alr~~~a~~i~lViPYl~YaRQDr--------------~~~~ge~isak~~a~lL~~~g~d~vitvD~H 136 (323)
T PRK02458 71 DHLWELLIMIDACKRASANTVNVVLPYFGYARQDR--------------IAKPREPITAKLVANMLVKAGVDRVLTLDLH 136 (323)
T ss_pred hHHHHHHHHHHHHHHcCCceEEEEEeccccchhhc--------------ccCCCCCchHHHHHHHHhhcCCCeEEEEecC
Confidence 56789999988877 4468999999999999998 7788999999999999999999999999999
Q ss_pred ccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccccccccccccccCC
Q psy15568 604 QKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDEYEVDLTG 683 (1231)
Q Consensus 604 s~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~~~~~d~~~d~~pg 683 (1231)
++++++||++|++||++.|++++|+++...+.++++||+||.|+.+||+.+|+.|++++++++|.|...
T Consensus 137 ~~~i~~~F~~p~~nl~~~p~~~~~l~~~~~~~~~~vvV~pd~Ga~~~A~~la~~L~~~~~~~~~~r~~~----------- 205 (323)
T PRK02458 137 AVQVQGFFDIPVDNLFTVPLFAKHYCKKGLSGSDVVVVSPKNSGIKRARSLAEYLDAPIAIIDYAQDDS----------- 205 (323)
T ss_pred cHHhhccccCCceEEEEHHHHHHHHHHhCCCCCceEEEEECCChHHHHHHHHHHhCCCEEEEEEecCCC-----------
Confidence 999999999999999999999999976422347899999999999999999999999999988765310
Q ss_pred CcceeeecCCCccccccccccCCccccceeecCCCChhhhHHHHHHHhcCcEEEEeCCCCCCcccccccccccccccCch
Q psy15568 684 RPDKVYLSGLPDRVLISHVSQIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDEYEVDLTRYIRENPE 763 (1231)
Q Consensus 684 ~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~v~Rlr~SialW~G~NE~~~~~~~~~~~~~~~~~~~~ 763 (1231)
+
T Consensus 206 -----------------------------------------------------------~-------------------- 206 (323)
T PRK02458 206 -----------------------------------------------------------E-------------------- 206 (323)
T ss_pred -----------------------------------------------------------c--------------------
Confidence 0
Q ss_pred hhHHhHHHHHHHhHHHHHHhhCCCCCcccCCCCCCcCCcccccccCCCCCCCCCCCCcccCCcCCCCCCCccccccCCCC
Q psy15568 764 LYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDSGWTGVSSPSPCPAPLLSYHGDGS 843 (1231)
Q Consensus 764 ~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~SSPs~G~~~~~~~~~~~~~p~~~~~Gd~~~~~~~~~~p~~~~f~s~~g~~~ 843 (1231)
. .
T Consensus 207 ----------------------------------~-~------------------------------------------- 208 (323)
T PRK02458 207 ----------------------------------R-E------------------------------------------- 208 (323)
T ss_pred ----------------------------------c-e-------------------------------------------
Confidence 0 0
Q ss_pred CCCCCccccCCCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEecCCCCchhHHHHHHhhcccccccce
Q psy15568 844 KEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDYDGNWKMLHYFARKFFAPVLISPV 923 (1231)
Q Consensus 844 ~~s~~~~~~g~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~GsliDy~GrwK~lhY~akr~~aPvlV~~~ 923 (1231)
.....|+++|+.++++||+++++.+++.+++.+++.|++++++.+|||+|.+.-
T Consensus 209 ----~~~i~gdV~gk~viIVDDIidTG~Tl~~aa~~Lk~~GA~~V~~~~tHgif~~~a---------------------- 262 (323)
T PRK02458 209 ----EGYIIGDVAGKKAILIDDILNTGKTFAEAAKIVEREGATEIYAVASHGLFAGGA---------------------- 262 (323)
T ss_pred ----eeccccccCCCEEEEEcceeCcHHHHHHHHHHHHhCCCCcEEEEEEChhcCchH----------------------
Confidence 001235788999999999999999999999999999999999999999987510
Q ss_pred eecCCCeEEEEEEecCCCCceeEEEEEEEEecCCCCCccccCcCeEEeeccccccccCccccccccccCchHHHHHHHhc
Q psy15568 924 FNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWNDTRPFRSVKTPLVTVKLCAAEEIQGFFDCPVDNLRASPFLLQYIQDS 1003 (1231)
Q Consensus 924 ~~~~~~~leL~lvnDa~~~a~~i~v~ip~y~~~~~~p~~~~~~~~it~dlhss~~i~~ff~ip~~~l~~~~~l~~~l~~~ 1003 (1231)
.+.|..+++ ++
T Consensus 263 ---------------------------------------------------------------~~~l~~s~i------~~ 273 (323)
T PRK02458 263 ---------------------------------------------------------------AEVLENAPI------KE 273 (323)
T ss_pred ---------------------------------------------------------------HHHHhhCCC------CE
Confidence 112333333 77
Q ss_pred cccccCccccccccCCCcEEeecchhhHHHHHHHhhcccchhhhhh
Q psy15568 1004 VVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLFR 1049 (1231)
Q Consensus 1004 ~~~~n~v~~~~~~~~~p~l~~pD~g~~~a~~i~~~~~~~~~~~~~~ 1049 (1231)
+++||++|++.. ..+++..+|++.++|++|+++++.++++.+|.
T Consensus 274 iv~TdTi~~~~~--~~~k~~~isva~lla~~i~~~~~~~s~~~~~~ 317 (323)
T PRK02458 274 ILVTDSVATKER--VPKNVTYLSASELIADAIIRIHERKPLSPLFA 317 (323)
T ss_pred EEEECCcCCchh--cCCCcEEEEhHHHHHHHHHHHHcCCCHHHHhC
Confidence 899999976432 24679999999999999999999999998886
No 32
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.95 E-value=1.7e-28 Score=278.85 Aligned_cols=248 Identities=33% Similarity=0.537 Sum_probs=207.0
Q ss_pred CCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEecc
Q psy15568 526 SRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDLH 603 (1231)
Q Consensus 526 ~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDlH 603 (1231)
+..+|++++-|+++ ..+++++++||++|+||++ ++++++++++|++|+||+.+|+|+|+|+|+|
T Consensus 51 d~l~ell~~~~a~r~~~a~~i~~ViPYl~YaRQDr--------------~~~~~e~isak~va~lL~~~g~d~vitvD~H 116 (304)
T PRK03092 51 KWLMEQLIMIDALKRASAKRITVVLPFYPYARQDK--------------KHRGREPISARLVADLFKTAGADRIMTVDLH 116 (304)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEEeccccccccc--------------ccCCCCCccHHHHHHHHHhcCCCeEEEEecC
Confidence 56788888888887 4468999999999999998 6778999999999999999999999999999
Q ss_pred ccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhC-CcEEEEecccccccccccccccC
Q psy15568 604 QKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLR-LGIAVIHGEQKESESDEYEVDLT 682 (1231)
Q Consensus 604 s~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~-~~~~~~~k~r~~~~~d~~~d~~p 682 (1231)
++++++||++|++||++.+.+++||.+.. ..++++||+||.|+.+||+.+|+.|+ +++++++|.|+..
T Consensus 117 ~~~~~~~f~~p~~~l~~~~~la~~i~~~~-~~~~~vvVspd~Ga~~~a~~la~~L~~~~~~~i~k~R~~~---------- 185 (304)
T PRK03092 117 TAQIQGFFDGPVDHLFAMPLLADYVRDKY-DLDNVTVVSPDAGRVRVAEQWADRLGGAPLAFIHKTRDPT---------- 185 (304)
T ss_pred hHHHHhhcCCCeeeEechHHHHHHHHHhc-CCCCcEEEEecCchHHHHHHHHHHcCCCCEEEEEEEcccC----------
Confidence 99999999999999999999999997642 45889999999999999999999999 9999999998510
Q ss_pred CCcceeeecCCCccccccccccCCccccceeecCCCChhhhHHHHHHHhcCcEEEEeCCCCCCcccccccccccccccCc
Q psy15568 683 GRPDKVYLSGLPDRVLISHVSQIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDEYEVDLTRYIRENP 762 (1231)
Q Consensus 683 g~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~v~Rlr~SialW~G~NE~~~~~~~~~~~~~~~~~~~ 762 (1231)
+ + ++.
T Consensus 186 -~-------------------------------------------------------~-~~~------------------ 190 (304)
T PRK03092 186 -V-------------------------------------------------------P-NQV------------------ 190 (304)
T ss_pred -C-------------------------------------------------------C-Cce------------------
Confidence 0 0 000
Q ss_pred hhhHHhHHHHHHHhHHHHHHhhCCCCCcccCCCCCCcCCcccccccCCCCCCCCCCCCcccCCcCCCCCCCccccccCCC
Q psy15568 763 ELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDSGWTGVSSPSPCPAPLLSYHGDG 842 (1231)
Q Consensus 763 ~~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~SSPs~G~~~~~~~~~~~~~p~~~~~Gd~~~~~~~~~~p~~~~f~s~~g~~ 842 (1231)
T Consensus 191 -------------------------------------------------------------------------------- 190 (304)
T PRK03092 191 -------------------------------------------------------------------------------- 190 (304)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccccCCCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEecCCCCchhHHHHHHhhcccccccc
Q psy15568 843 SKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDYDGNWKMLHYFARKFFAPVLISP 922 (1231)
Q Consensus 843 ~~~s~~~~~~g~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~GsliDy~GrwK~lhY~akr~~aPvlV~~ 922 (1231)
..+.+.++++|+.++++||+++++.+++.+++.+++.|++++++.+|||++....
T Consensus 191 ----~~~~~~~dv~gr~viIVDDIi~TG~Tl~~aa~~Lk~~Ga~~I~~~~tH~v~~~~a--------------------- 245 (304)
T PRK03092 191 ----VANRVVGDVEGRTCVLVDDMIDTGGTIAGAVRALKEAGAKDVIIAATHGVLSGPA--------------------- 245 (304)
T ss_pred ----EEEecCcCCCCCEEEEEccccCcHHHHHHHHHHHHhcCCCeEEEEEEcccCChHH---------------------
Confidence 0012235778999999999999999999999999999999999999999885310
Q ss_pred eeecCCCeEEEEEEecCCCCceeEEEEEEEEecCCCCCccccCcCeEEeeccccccccCccccccccccCchHHHHHHHh
Q psy15568 923 VFNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWNDTRPFRSVKTPLVTVKLCAAEEIQGFFDCPVDNLRASPFLLQYIQD 1002 (1231)
Q Consensus 923 ~~~~~~~~leL~lvnDa~~~a~~i~v~ip~y~~~~~~p~~~~~~~~it~dlhss~~i~~ff~ip~~~l~~~~~l~~~l~~ 1002 (1231)
.+.|..+++ +
T Consensus 246 ----------------------------------------------------------------~~~l~~~~~------~ 255 (304)
T PRK03092 246 ----------------------------------------------------------------AERLKNCGA------R 255 (304)
T ss_pred ----------------------------------------------------------------HHHHHHCCC------C
Confidence 112222332 6
Q ss_pred ccccccCccccccccCCCcEEeecchhhHHHHHHHhhcccchhhhhh
Q psy15568 1003 SVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLFR 1049 (1231)
Q Consensus 1003 ~~~~~n~v~~~~~~~~~p~l~~pD~g~~~a~~i~~~~~~~~~~~~~~ 1049 (1231)
+++++|++|++.+ ...+++...|++.++|++|+++++.++++.+|.
T Consensus 256 ~i~~t~tip~~~~-~~~~~~~~~sva~~la~~i~~~~~~~s~~~l~~ 301 (304)
T PRK03092 256 EVVVTDTLPIPEE-KRFDKLTVLSIAPLLARAIREVFEDGSVTSLFD 301 (304)
T ss_pred EEEEeeeeccchh-hcCCCeEEEEhHHHHHHHHHHHHcCCCHHHHhC
Confidence 7789999977654 346789999999999999999999999998886
No 33
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.94 E-value=1.5e-27 Score=272.70 Aligned_cols=129 Identities=29% Similarity=0.592 Sum_probs=119.4
Q ss_pred CCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEecc
Q psy15568 526 SRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDLH 603 (1231)
Q Consensus 526 ~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDlH 603 (1231)
+..+||+++.|+++ +.+++++++||++|++|++ ++++|+++++|++|+||+.+|+|+|||||+|
T Consensus 83 d~l~eLll~~~alr~~ga~ri~~ViPYl~YaRQDr--------------~~~~~e~isak~vA~lL~~~g~d~vitvDlH 148 (330)
T PRK02812 83 DHLMELLIMVDACRRASARQITAVIPYYGYARADR--------------KTAGRESITAKLVANLITKAGADRVLAMDLH 148 (330)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEEEeccccccccc--------------ccCCCCCchHHHHHHHHHhcCCCEEEEEECC
Confidence 56789999999887 4468999999999999998 7788999999999999999999999999999
Q ss_pred ccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhC-CcEEEEecccc
Q psy15568 604 QKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLR-LGIAVIHGEQK 670 (1231)
Q Consensus 604 s~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~-~~~~~~~k~r~ 670 (1231)
++++++||++|++||++.+.+++||++. +.++++||+||.|+.+||+.+|+.|+ .++++++|+|.
T Consensus 149 ~~~~~~fF~ipv~nl~~~~~l~~~i~~~--~~~~~vvVsPD~gg~~ra~~~A~~L~~~~~~~~~k~R~ 214 (330)
T PRK02812 149 SAQIQGYFDIPCDHVYGSPVLLDYLASK--NLEDIVVVSPDVGGVARARAFAKKLNDAPLAIIDKRRQ 214 (330)
T ss_pred chHHcCccCCCceeeeChHHHHHHHHhc--CCCCeEEEEECCccHHHHHHHHHHhCCCCEEEEEeecc
Confidence 9999999999999999999999999764 46899999999999999999999995 89999999884
No 34
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.93 E-value=1.4e-26 Score=264.02 Aligned_cols=130 Identities=34% Similarity=0.574 Sum_probs=119.4
Q ss_pred CCCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEec
Q psy15568 525 SSRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDL 602 (1231)
Q Consensus 525 ~~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDl 602 (1231)
++..+++.++.|+++ +.+++++++||++|+||++ ++++++++++|++|+||+.+|+|+|+|||+
T Consensus 61 nd~l~eLll~~~alr~~ga~~i~lViPYl~YsRQDr--------------~~~~ge~isak~~a~lL~~~g~d~vitvD~ 126 (309)
T PRK01259 61 NDNLMELLIMIDALKRASAGRITAVIPYFGYARQDR--------------KARSRVPITAKLVANLLETAGADRVLTMDL 126 (309)
T ss_pred cHHHHHHHHHHHHHHHcCCceEEEEeeccccchhhh--------------hhccCCCchHHHHHHHHhhcCCCEEEEEcC
Confidence 356788888888886 4468999999999999998 677899999999999999999999999999
Q ss_pred cccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 603 HQKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 603 Hs~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
|++++++||++|++||.+.|++++|+++. +.++++||+||.|+.+||+.+|+.||+++.++.|.|.
T Consensus 127 H~~~~~~~f~~p~~~l~~~~~l~~~i~~~--~~~~~vvv~pd~Gg~~~A~~la~~Lg~~~~~~~k~r~ 192 (309)
T PRK01259 127 HADQIQGFFDIPVDNLYGSPILLEDIKQK--NLENLVVVSPDVGGVVRARALAKRLDADLAIIDKRRP 192 (309)
T ss_pred ChHHHcCcCCCCceeeeecHHHHHHHHhc--CCCCcEEEEECCCcHHHHHHHHHHhCCCEEEEEeecc
Confidence 99999999999999999999999999764 5688999999999999999999999999999988874
No 35
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=99.92 E-value=2.5e-26 Score=260.81 Aligned_cols=131 Identities=24% Similarity=0.512 Sum_probs=119.3
Q ss_pred CCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEecc
Q psy15568 526 SRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDLH 603 (1231)
Q Consensus 526 ~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDlH 603 (1231)
+..++|+++.|+++ ..+++++++||++|++|++ ++.+++++++|++|+||+.+|+|+|+|+|+|
T Consensus 53 d~l~eLl~~~~a~r~~~a~~i~~ViPYl~YsRQDr--------------~~~~~e~isak~va~lL~~~g~d~vi~vDlH 118 (302)
T PLN02369 53 ENLMELLIMIDACRRASAKRITAVIPYFGYARADR--------------KTQGRESIAAKLVANLITEAGADRVLACDLH 118 (302)
T ss_pred hHHHHHHHHHHHHHHcCCCeEEEEeeccccccccc--------------ccCCCCCchHHHHHHHHHhcCCCEEEEEECC
Confidence 56789999988887 4467899999999999998 6778999999999999999999999999999
Q ss_pred ccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhh-CCcEEEEecccc
Q psy15568 604 QKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERL-RLGIAVIHGEQK 670 (1231)
Q Consensus 604 s~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L-~~~~~~~~k~r~ 670 (1231)
++++++||++|++|+++.|.+++||.+.....++++||+||.|+.+||+.+|+.| +.+++++.|+|+
T Consensus 119 s~~i~~~F~ip~~~l~~~~~~~~~i~~~~~~~~~~vvVspd~gg~~~a~~~a~~l~~~~~~~l~k~R~ 186 (302)
T PLN02369 119 SGQSMGYFDIPVDHVYGQPVILDYLASKTISSPDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQ 186 (302)
T ss_pred chHHhhccCCceecccchHHHHHHHHHhCCCCCceEEEEECcChHHHHHHHHHHcCCCCEEEEEEecC
Confidence 9999999999999999999999999764323378999999999999999999999 799999999884
No 36
>PLN02297 ribose-phosphate pyrophosphokinase
Probab=99.92 E-value=3.8e-26 Score=259.01 Aligned_cols=128 Identities=18% Similarity=0.202 Sum_probs=115.4
Q ss_pred CCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhc-----cCcceEE
Q psy15568 526 SRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCT-----SGLKHII 598 (1231)
Q Consensus 526 ~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~-----~g~d~vi 598 (1231)
++.+|++++.|+++ +.+++++++||++|+||++ ++++||++++|++|+||+. +|+|+|+
T Consensus 79 d~lmELLl~~dAlr~~ga~~i~~ViPY~~YaRQDr--------------~~~~ge~isak~vA~ll~~~~~~~~g~d~vi 144 (326)
T PLN02297 79 AVIFEQLSVIYALPKLFVASFTLVLPFFPTGTSER--------------VEREGDVATAFTLARILSNIPISRGGPTSLV 144 (326)
T ss_pred hHHHHHHHHHHHHHHcCCCEEEEEeeCChhhcCCC--------------CCCCCCCchHHHHHHHHhcccccccCCCEEE
Confidence 56889999999987 4468999999999999998 8899999999999999999 8999999
Q ss_pred EEeccccccccccCcccccc--cCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 599 TMDLHQKEIQGFFDCPVDNL--RASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 599 tvDlHs~~~~~~F~~p~~~l--~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
|||+|++++++||+.|++++ ++.|.+++||++. .+.++++|||||.|+.+|++.++ +++++++++|+|.
T Consensus 145 tvDlH~~~~~~fF~~~~~~l~l~a~~~l~~~i~~~-~~~~~~vvVsPD~Ga~~ra~~~a--~~~~~~~~~K~R~ 215 (326)
T PLN02297 145 IFDIHALQERFYFGDNVLPCFESGIPLLKKRLQQL-PDSDNIVIAFPDDGAWKRFHKQF--EHFPMVVCTKVRE 215 (326)
T ss_pred EEeCCChHHCCccCCcccchhhccHHHHHHHHHhc-cccCCcEEEecCccHHHHHHHHc--CCCCEEEEEeEEC
Confidence 99999999999999999866 9999999999753 13578999999999999998887 6899999999984
No 37
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional
Probab=99.91 E-value=1.4e-25 Score=254.61 Aligned_cols=127 Identities=16% Similarity=0.291 Sum_probs=116.8
Q ss_pred CCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEecc
Q psy15568 526 SRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDLH 603 (1231)
Q Consensus 526 ~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDlH 603 (1231)
+..+|++++-|+++ +.+++++++||++|++|++ ++++|+++++|++|+||++ |+|+|+|+|+|
T Consensus 63 ~~l~elll~~~alr~~~a~~i~~ViPY~~YaRqDr--------------~~~~ge~isak~vA~ll~~-~~d~vit~DlH 127 (301)
T PRK07199 63 EKLLPLLFAAEAARELGARRVGLVAPYLAYMRQDI--------------AFHPGEAISQRHFARLLSG-SFDRLVTVDPH 127 (301)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEeeccccccccc--------------ccCCCCCccHHHHHHHHHh-hcCeEEEEecc
Confidence 56789999988887 4468999999999999998 7889999999999999985 89999999999
Q ss_pred c---cccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 604 Q---KEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 604 s---~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
+ .++++||++|++|+++.+.+++||++. .++++||+||.|+.+||+.+|+.|+.++++++|.|.
T Consensus 128 ~~~~~~~~~~f~ip~~nl~~~~~la~~l~~~---~~~~vVVsPd~g~~~~a~~la~~l~~~~~~~~K~R~ 194 (301)
T PRK07199 128 LHRYPSLSEVYPIPAVVLSAAPAIAAWIRAH---VPRPLLIGPDEESEQWVAAVAERAGAPHAVLRKTRH 194 (301)
T ss_pred chhhHHhcCcccCCccccchHHHHHHHHHhc---CCCcEEEEeCCChHHHHHHHHHHhCCCEEEEEEEec
Confidence 7 789999999999999999999999863 578999999999999999999999999999999884
No 38
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=99.89 E-value=4.7e-24 Score=244.14 Aligned_cols=129 Identities=33% Similarity=0.575 Sum_probs=119.0
Q ss_pred CCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEecc
Q psy15568 526 SRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDLH 603 (1231)
Q Consensus 526 ~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDlH 603 (1231)
+..++++++.|+++ +.+++++++||++|+||++ ++++++++++|++|+||+++|+|+|+|+|+|
T Consensus 63 ~~l~el~~~~~a~r~~ga~~i~~v~PYl~Y~RqDr--------------~~~~ge~is~~~~a~ll~~~g~d~vit~DlH 128 (308)
T TIGR01251 63 DNLMELLIMIDALKRASAKSITAVIPYYGYARQDK--------------KFKSREPISAKLVANLLETAGADRVLTVDLH 128 (308)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEEEecccchhcc--------------ccCCCCCchHHHHHHHHHHcCCCEEEEecCC
Confidence 56788888888877 4468999999999999998 7788999999999999999999999999999
Q ss_pred ccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 604 QKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 604 s~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
++++++||++|++|+++.+.+++||.+. ..++++||+||.|+.+||+.+|+.||+++.++.|.|.
T Consensus 129 s~~~~~~f~ip~~~l~a~~~l~~~i~~~--~~~~~viv~pd~g~~~~A~~lA~~Lg~~~~~i~k~r~ 193 (308)
T TIGR01251 129 SPQIQGFFDVPVDNLYASPVLAEYLKKK--ILDNPVVVSPDAGGVERAKKVADALGCPLAIIDKRRI 193 (308)
T ss_pred hHHhcCcCCCceecccCHHHHHHHHHhh--CCCCCEEEEECCchHHHHHHHHHHhCCCEEEEEEEec
Confidence 9999999999999999999999999874 2578999999999999999999999999999999884
No 39
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=99.87 E-value=2.9e-23 Score=234.86 Aligned_cols=127 Identities=25% Similarity=0.406 Sum_probs=117.1
Q ss_pred CCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEecc
Q psy15568 526 SRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDLH 603 (1231)
Q Consensus 526 ~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDlH 603 (1231)
+..++|+++.|+++ +.+++++.+||++|+||++ ++++||++++|++|+||+++| |+|+|||+|
T Consensus 60 d~l~ell~~~~alr~~ga~~i~~v~PY~~YaRqDr--------------~~~~ge~isak~~a~ll~~~~-d~vitvD~H 124 (285)
T PRK00934 60 ENLVELLLLIDALRDEGAKSITLVIPYLGYARQDK--------------RFKPGEPISARAIAKIISAYY-DRIITINIH 124 (285)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEecCCccccccc--------------ccCCCCCccHHHHHHHHHHhc-CEEEEEcCC
Confidence 45789998888877 4578999999999999998 788999999999999999998 999999999
Q ss_pred ccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 604 QKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 604 s~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
++++++||++|++|+++.+.++++|.+ +.++++||+||.|+.+||+.+|+.|++++.++.|.|.
T Consensus 125 ~~~~~~~f~~~~~~l~a~~~la~~i~~---~~~~~vvv~pd~Ga~~~a~~lA~~l~~~~~~i~k~r~ 188 (285)
T PRK00934 125 EPSILEFFPIPFINLDAAPLIAEYIGD---KLDDPLVLAPDKGALELAKEAAEILGCEYDYLEKTRI 188 (285)
T ss_pred hHHHcCcCCCcEeEeecHHHHHHHHHh---cCCCCEEEEeCCchHHHHHHHHHHhCCCEEEEEEEec
Confidence 999999999999999999999999965 4568899999999999999999999999999988874
No 40
>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A ....
Probab=99.80 E-value=5.6e-21 Score=197.42 Aligned_cols=112 Identities=60% Similarity=0.957 Sum_probs=87.9
Q ss_pred CCccccCCCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEecCCCCchhHHHHHHhhcccccccceeec
Q psy15568 847 PPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDYDGNWKMLHYFARKFFAPVLISPVFNV 926 (1231)
Q Consensus 847 ~~~~~~g~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~GsliDy~GrwK~lhY~akr~~aPvlV~~~~~~ 926 (1231)
+.+.+.||++|+.|+++|||+++.++++.++++++..|+++||+.+|||+|.+..
T Consensus 73 ~~~~vVGDV~gk~~IIvDDiIdtg~Tl~~aA~~Lk~~GA~~V~~~aTHgvfs~~A------------------------- 127 (184)
T PF14572_consen 73 PPMNVVGDVKGKICIIVDDIIDTGGTLIKAAELLKERGAKKVYACATHGVFSGDA------------------------- 127 (184)
T ss_dssp --EEEES--TTSEEEEEEEEESSTHHHHHHHHHHHHTTESEEEEEEEEE---TTH-------------------------
T ss_pred cceEEEEEccCCeEeeecccccchHHHHHHHHHHHHcCCCEEEEEEeCcccCchH-------------------------
Confidence 4578899999999999999999999999999999999999999999999997510
Q ss_pred CCCeEEEEEEecCCCCceeEEEEEEEEecCCCCCccccCcCeEEeeccccccccCccccccccccCchHHHHHHHhcccc
Q psy15568 927 SSRTLEVVLLNDPNRPLHNVTIVTESYAWNDTRPFRSVKTPLVTVKLCAAEEIQGFFDCPVDNLRASPFLLQYIQDSVVV 1006 (1231)
Q Consensus 927 ~~~~leL~lvnDa~~~a~~i~v~ip~y~~~~~~p~~~~~~~~it~dlhss~~i~~ff~ip~~~l~~~~~l~~~l~~~~~~ 1006 (1231)
.+.|..+++ +++++
T Consensus 128 ------------------------------------------------------------~~~l~~s~I------d~vvv 141 (184)
T PF14572_consen 128 ------------------------------------------------------------PERLEESPI------DEVVV 141 (184)
T ss_dssp ------------------------------------------------------------HHHHHHSSE------SEEEE
T ss_pred ------------------------------------------------------------HHHHhhcCC------eEEEE
Confidence 123344443 78999
Q ss_pred ccCccccccccCCCcEEeecchhhHHHHHHHhhcccchhhhhh
Q psy15568 1007 TNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLFR 1049 (1231)
Q Consensus 1007 ~n~v~~~~~~~~~p~l~~pD~g~~~a~~i~~~~~~~~~~~~~~ 1049 (1231)
||++|++.+.+.+++|..+|++.++|++|+|+|+++|+|.||+
T Consensus 142 TnTIp~~~~~~~~~Ki~vldis~llaeaI~rih~~eSvs~LFr 184 (184)
T PF14572_consen 142 TNTIPQEEQKLQCPKIKVLDISPLLAEAIRRIHNGESVSYLFR 184 (184)
T ss_dssp ETTS--HHHHHH-TTEEEE--HHHHHHHHHHHHHTHTSCCGGS
T ss_pred eccccCchhhhcCCCEeEeehHHHHHHHHHHHHcCCCHHHhcC
Confidence 9999988777789999999999999999999999999999984
No 41
>PF00703 Glyco_hydro_2: Glycosyl hydrolases family 2; InterPro: IPR006102 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities: beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. This entry describes the immunoglobulin-like beta-sandwich domain [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3FN9_C 3DEC_A 3OB8_A 3OBA_A 3CMG_A 3GM8_A 3HN3_E 1BHG_A 2VZU_A 2X09_A ....
Probab=99.40 E-value=9e-12 Score=120.65 Aligned_cols=108 Identities=20% Similarity=0.324 Sum_probs=82.1
Q ss_pred ceEeeeEEEEEeeCCcceEEEEEEEEEEeccccceeEEEEEEEEEeCCcceEEeeeeeeecCCCc-eEEEEEEEecCCCc
Q psy15568 53 ARIRDILTDITYHEDLKSWHLSVRVILEAGLSQAVVKAKLTAELAVGKKPLRVDSLVNAEPSHGE-IEVVSTLMVLASEV 131 (1231)
Q Consensus 53 ~~I~~~~v~~~~~~~~~~~~v~v~v~l~n~~~~~~~~~~l~~~i~~~~~~~~~~~~~~v~~~~g~-~~~~~~~~i~~~~p 131 (1231)
++|+++++.|.++.+ +++.+++++.+.+..... ..+++++.+.+..+..............+. ....+.+.+ ++|
T Consensus 1 v~I~dv~v~~~~~~~-~~~~v~v~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~ 76 (110)
T PF00703_consen 1 VHIEDVFVTPDLDDD-DSAKVSVEVEVRNESNKP-LDVTVRVRLFDPEGKKVVTQSPVVSLSAPGQARITLTIEI--PNP 76 (110)
T ss_dssp CEEEEEEEEEEEETT-SEEEEEEEEEEEEESSSS-CEEEEEEEEEETTSEEEEEEEEEEEECCCCEEEEEEEEEE--ESS
T ss_pred CEEEEEEEEEEEcCC-CEEEEEEEEEEEeCCCCc-EEEEEEEEEECCCCCEEEEeeeEEEecCCceeEEEEEEEc--CCC
Confidence 589999999999875 789999999988888777 788888888776654443332223333333 333446666 899
Q ss_pred ccCCCCCCCCCCcEEEEEEEEe-CcEEEEEEEeEEEE
Q psy15568 132 ELWWPNGYGEQPLYNLQITLAS-GVEMSTKSIKIGFR 167 (1231)
Q Consensus 132 ~LWwP~g~G~P~LY~l~v~l~~-g~~~D~~~~~fGfR 167 (1231)
+||||. +|+||+|+++|.. |+.+|..+.+||||
T Consensus 77 ~lW~p~---~P~LY~l~v~l~~~g~~~d~~~~~~GfR 110 (110)
T PF00703_consen 77 KLWSPE---DPYLYTLEVELDDDGEVLDSIETRFGFR 110 (110)
T ss_dssp -BBESS---SBSEEEEEEEEEETTEEEEEEEEEEEB-
T ss_pred CCcCCC---CceEEEEEEEEEeCCEEEEEEEeEeeEC
Confidence 999995 9999999999966 88999999999999
No 42
>KOG1503|consensus
Probab=99.30 E-value=9.4e-13 Score=137.16 Aligned_cols=279 Identities=66% Similarity=0.993 Sum_probs=228.6
Q ss_pred CCCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccCcceEEEEec
Q psy15568 525 SSRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSGLKHIITMDL 602 (1231)
Q Consensus 525 ~~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g~d~vitvDl 602 (1231)
+++.+||.++..+.+ -.+.+..++||++|+- |++|.+|++|.+|++|.|++.+|..++||+||
T Consensus 69 n~~vmellim~yackts~aksiigvipy~pysk---------------qckmrkrgsiv~klla~mmckaglthlitmdl 133 (354)
T KOG1503|consen 69 NNDVMELLIMAYACKTSCAKSIIGVIPYLPYSK---------------QCKMRKRGSIVSKLLASMMCKAGLTHLITMDL 133 (354)
T ss_pred chHHHHHHHHHHHHhhhhhhceEEEeecCccch---------------hhhhhhcccHHHHHHHHHHHhcccceEEeehh
Confidence 345677777766665 2367899999999984 46899999999999999999999999999999
Q ss_pred cccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccccccccccccccC
Q psy15568 603 HQKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDEYEVDLT 682 (1231)
Q Consensus 603 Hs~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~~~~~d~~~d~~p 682 (1231)
|...+||||++|++||.++|.|.+||++.+|+++|.|||+...|.+|+|+.+|++|.++++++|.+..... .|+..
T Consensus 134 hqkeiqgff~~pvdnlraspfllqyiqe~ipdyrnavivaksp~~akka~syaerlrlglavihge~k~~e----~d~~d 209 (354)
T KOG1503|consen 134 HQKEIQGFFSIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPGVAKKAQSYAERLRLGLAVIHGEQKDTE----SDLVD 209 (354)
T ss_pred hhHhhcceecccccccccCHHHHHHHHHhCccccceEEEecCcchhhHHHhHHHHHhhceeEeeccccccc----ccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999875322 23434
Q ss_pred CCc--ceeeecCCCccccccccccCCccccceeecCCCChhhhHHHHHHHhcCcEEEEeCCCCCCccccccccccccccc
Q psy15568 683 GRP--DKVYLSGLPDRVLISHVSQIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDEYEVDLTRYIRE 760 (1231)
Q Consensus 683 g~~--~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~v~Rlr~SialW~G~NE~~~~~~~~~~~~~~~~~ 760 (1231)
||. ++++.
T Consensus 210 gr~spp~~~~---------------------------------------------------------------------- 219 (354)
T KOG1503|consen 210 GRHSPPPVVT---------------------------------------------------------------------- 219 (354)
T ss_pred CCcCCCCccc----------------------------------------------------------------------
Confidence 441 10000
Q ss_pred CchhhHHhHHHHHHHhHHHHHHhhCCCCCcccCCCCCCcCCcccccccCCCCCCCCCCCCcccCCcCCCCCCCccccccC
Q psy15568 761 NPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDSGWTGVSSPSPCPAPLLSYHG 840 (1231)
Q Consensus 761 ~~~~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~SSPs~G~~~~~~~~~~~~~p~~~~~Gd~~~~~~~~~~p~~~~f~s~~g 840 (1231)
-..+|+-+. | -
T Consensus 220 ------------------------------~t~~~~~~l------------------------------p---------~ 230 (354)
T KOG1503|consen 220 ------------------------------ATTHPSLEL------------------------------P---------A 230 (354)
T ss_pred ------------------------------cccCccccC------------------------------c---------h
Confidence 000011000 0 0
Q ss_pred CCCCCCCCccccCCCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEecCCCCchhHHHHHHhhcccccc
Q psy15568 841 DGSKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDYDGNWKMLHYFARKFFAPVLI 920 (1231)
Q Consensus 841 ~~~~~s~~~~~~g~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~GsliDy~GrwK~lhY~akr~~aPvlV 920 (1231)
..+.+-|.+..+||+.||+++++||++++.++|+.++++++++|+.+||+.+|||.|..- |
T Consensus 231 ~~~k~kppltvvgdvggriaimvddiiddvqsfvaaae~lkergaykiyv~athgllssd---------------a---- 291 (354)
T KOG1503|consen 231 QISKEKPPLTVVGDVGGRIAIMVDDIIDDVQSFVAAAEVLKERGAYKIYVMATHGLLSSD---------------A---- 291 (354)
T ss_pred hhcccCCCeEEEeccCceEEEEehhhHHhHHHHHHHHHHHHhcCceEEEEEeeccccccc---------------c----
Confidence 123345678899999999999999999999999999999999999999999999998420 1
Q ss_pred cceeecCCCeEEEEEEecCCCCceeEEEEEEEEecCCCCCccccCcCeEEeeccccccccCccccccccccCchHHHHHH
Q psy15568 921 SPVFNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWNDTRPFRSVKTPLVTVKLCAAEEIQGFFDCPVDNLRASPFLLQYI 1000 (1231)
Q Consensus 921 ~~~~~~~~~~leL~lvnDa~~~a~~i~v~ip~y~~~~~~p~~~~~~~~it~dlhss~~i~~ff~ip~~~l~~~~~l~~~l 1000 (1231)
+..|..+++
T Consensus 292 ------------------------------------------------------------------pr~lees~i----- 300 (354)
T KOG1503|consen 292 ------------------------------------------------------------------PRLLEESPI----- 300 (354)
T ss_pred ------------------------------------------------------------------hhhhhcCCC-----
Confidence 113455665
Q ss_pred HhccccccCccccccccCCCcEEeecchhhHHHHHHHhhcccchhhhhhccC
Q psy15568 1001 QDSVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLFRNVD 1052 (1231)
Q Consensus 1001 ~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~a~~i~~~~~~~~~~~~~~~~~ 1052 (1231)
+++++||++||+.+++.+++|..+|++-+++|+|+|+|++++++++|+++.
T Consensus 301 -devvvtntvphevqklqc~kiktvdislii~eairrihn~esm~ylfrnvt 351 (354)
T KOG1503|consen 301 -DEVVVTNTVPHEVQKLQCHKIKTVDISLIISEAIRRIHNGESMSYLFRNVT 351 (354)
T ss_pred -ceEEEecCCcHHHHhhcCCccceeehhhHHHHHHHHHhCCchHHHHHhhCc
Confidence 788999999999999999999999999999999999999999999998543
No 43
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=99.27 E-value=7.3e-12 Score=150.33 Aligned_cols=91 Identities=13% Similarity=0.167 Sum_probs=78.7
Q ss_pred ccC-CCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccC-CcccccCC
Q psy15568 1119 VGD-VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPH-DVQKLQCP 1196 (1231)
Q Consensus 1119 ~~~-v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~-~~~~~~~~ 1196 (1231)
.++ ++||+||||||+|+||+||.++++.|+++||++|.+++|||+|..++...|..+.++++++||.-.. -.+....+
T Consensus 334 ~~~~v~gK~VlLVDDvitTG~Tl~~a~~~Lr~aGA~~V~v~~~hp~~~~~~~~~i~~~~~~~li~~~~~~~ei~~~~~ad 413 (445)
T PRK08525 334 MSKVLEGKRIVVIDDSIVRGTTSKKIVSLLRAAGAKEIHLRIACPEIKFPCYYGIDTPTFEELISANKSVEEVRKYIGAD 413 (445)
T ss_pred cccccCCCeEEEEecccCcHHHHHHHHHHHHhcCCCEEEEEEECCCcCCchhhhCcCCChhhEEEcCCCHHHHHHHhCCC
Confidence 344 8999999999999999999999999999999999999999999999999999999999999997321 11234567
Q ss_pred CeEEEechHHHHH
Q psy15568 1197 KIKTVDISILLSE 1209 (1231)
Q Consensus 1197 ~~~~~~~a~l~a~ 1209 (1231)
-|..+|+..|..-
T Consensus 414 sl~~ls~~~l~~~ 426 (445)
T PRK08525 414 SLSFLSIDELTRS 426 (445)
T ss_pred eEeccCHHHHHHH
Confidence 8899999887654
No 44
>PRK13811 orotate phosphoribosyltransferase; Provisional
Probab=98.89 E-value=1.6e-08 Score=106.39 Aligned_cols=137 Identities=20% Similarity=0.206 Sum_probs=92.0
Q ss_pred EEeeccccccccCcc-ccccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhh
Q psy15568 969 VTVKLCAAEEIQGFF-DCPVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSY 1046 (1231)
Q Consensus 969 it~dlhss~~i~~ff-~ip~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~ 1046 (1231)
-.++||| .+.+++| |++. +...|.+.+++.+.+. .. .....+++|+.|++. |..++..+
T Consensus 18 g~f~L~S-G~~s~~y~d~~~--l~~~p~~~~~l~~~l~-~~--------~~~d~Vvg~~~gGi~~A~~~a~~l------- 78 (170)
T PRK13811 18 GDFTLAS-GAKSRYYIDIKT--AITHPALLKEIAAEVA-KR--------YDFDVVAGVAVGGVPLAVAVSLAA------- 78 (170)
T ss_pred CCEEEcc-CCcCCEEEeCch--hccCHHHHHHHHHHHH-hh--------CCCCEEEecCcCcHHHHHHHHHHH-------
Confidence 4588984 8888888 7765 6666766666644321 11 112368999999987 77777642
Q ss_pred hhhccCCCCCCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCE
Q psy15568 1047 LFRNVDGRASPPPSSIAPPSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRV 1126 (1231)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~ 1126 (1231)
+++...+.|.+... .. ...+.|+++||+
T Consensus 79 ---------------------------~~p~~~~rK~~k~~-----------------------g~--~~~~~g~~~g~~ 106 (170)
T PRK13811 79 ---------------------------GKPYAIIRKEAKDH-----------------------GK--AGLIIGDVKGKR 106 (170)
T ss_pred ---------------------------CCCEEEEecCCCCC-----------------------CC--cceEEcccCCCE
Confidence 22344555544321 11 113457899999
Q ss_pred EEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCC
Q psy15568 1127 AIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 1177 (1231)
Q Consensus 1127 ~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~ 1177 (1231)
|+||||+++||+|+.++++.|+++||+-+.++|.--.- .++.+++++.++
T Consensus 107 VlIVDDvi~TG~T~~~~~~~l~~~Ga~v~~~~~~vdr~-~g~~~~l~~~gv 156 (170)
T PRK13811 107 VLLVEDVTTSGGSALYGIEQLRAAGAVVDDVVTVVDRE-QGAEELLAELGI 156 (170)
T ss_pred EEEEEecccccHHHHHHHHHHHHCCCeEEEEEEEEECC-ccHHHHHHhcCC
Confidence 99999999999999999999999999977666643332 345677765444
No 45
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=98.88 E-value=3.1e-09 Score=128.49 Aligned_cols=92 Identities=15% Similarity=0.161 Sum_probs=78.0
Q ss_pred eccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCc-cCCcccccCC
Q psy15568 1118 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTI-PHDVQKLQCP 1196 (1231)
Q Consensus 1118 ~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti-~~~~~~~~~~ 1196 (1231)
+.++++||+||||||+|+||+|+.++++.|+++||++|.+++|||.|..++...+..+..+++|+.+.- ..-.+....+
T Consensus 347 ~~~~v~gk~VlLVDD~ItTGtTl~~~~~~Lr~aGAk~V~~~~~~p~~~~p~~~gid~~~~~elia~~~~~~ei~~~~g~d 426 (469)
T PRK05793 347 LKVNVEGKRVVLIDDSIVRGTTSKRLVELLRKAGAKEVHFRVSSPPVKYPCYFGIDTPYRKELIGANMSVEEIREMIGAD 426 (469)
T ss_pred CccccCCCEEEEEccccCchHHHHHHHHHHHHcCCCEEEEEEECCCcCcchhhhccCCChhhEEEcCCCHHHHHHHhCCC
Confidence 346789999999999999999999999999999999999999999999999999988899999988752 1111234467
Q ss_pred CeEEEechHHHHH
Q psy15568 1197 KIKTVDISILLSE 1209 (1231)
Q Consensus 1197 ~~~~~~~a~l~a~ 1209 (1231)
-|..+|+..|+.-
T Consensus 427 sl~~ls~~~l~~a 439 (469)
T PRK05793 427 SLGYLSIEGLLES 439 (469)
T ss_pred eEeccCHHHHHHH
Confidence 7889998877644
No 46
>PLN02293 adenine phosphoribosyltransferase
Probab=98.83 E-value=1.4e-08 Score=108.24 Aligned_cols=63 Identities=22% Similarity=0.289 Sum_probs=58.2
Q ss_pred cCC-CCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEE
Q psy15568 1120 GDV-GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVV 1182 (1231)
Q Consensus 1120 ~~v-~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~ 1182 (1231)
|++ +|++|+||||+++||+|+.++++.|++.|++.|.++|.|.++..++.++|.+.++..++.
T Consensus 120 ~~i~~G~rVlIVDDvitTG~T~~~~~~~l~~~Ga~~v~~~~~~~~~~~~g~~~l~~~~~~sl~~ 183 (187)
T PLN02293 120 GAVEPGERALVIDDLIATGGTLCAAINLLERAGAEVVECACVIELPELKGREKLNGKPLFVLVE 183 (187)
T ss_pred CccCCCCEEEEEeccccchHHHHHHHHHHHHCCCEEEEEEEEEEcCCccHHHHhcCCceEEEEe
Confidence 666 799999999999999999999999999999999999999999999999998777777764
No 47
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane. It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A.
Probab=98.81 E-value=1.7e-08 Score=112.88 Aligned_cols=123 Identities=16% Similarity=0.212 Sum_probs=79.8
Q ss_pred CCcEEEEEECCeeEEEecceecCCCC-----CCCCCCChHHHHHHHHHHHHcCCCEEEccCCCCCC---hHHHHHHHhHc
Q psy15568 183 KGRYFYFEVNKVPIYSKGSNLIPVDV-----LPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYM---SDYFYETCDEL 254 (1231)
Q Consensus 183 ~G~~f~f~lNG~pvflrG~n~~p~~~-----~~~~~~~~~~~~~~l~~~k~~g~N~iR~wggg~~~---~~~fydlcDe~ 254 (1231)
+|..|+-.-||.++|+||..|.|... ......+.+..++++.++|++|+|+||+. ..-| |+++..++.+.
T Consensus 14 kG~kff~~~~g~~F~ikGVaYQp~~~~~~~~~~DPLad~~~C~rDi~~l~~LgiNtIRVY--~vdp~~nHd~CM~~~~~a 91 (314)
T PF03198_consen 14 KGNKFFYSKNGTRFFIKGVAYQPGGSSEPSNYIDPLADPEACKRDIPLLKELGINTIRVY--SVDPSKNHDECMSAFADA 91 (314)
T ss_dssp ETTEEEETTT--B--EEEEE----------SS--GGG-HHHHHHHHHHHHHHT-SEEEES-----TTS--HHHHHHHHHT
T ss_pred ECCEeEECCCCCEEEEeeEEcccCCCCCCccCcCcccCHHHHHHhHHHHHHcCCCEEEEE--EeCCCCCHHHHHHHHHhC
Confidence 57663333899999999999988644 12223455899999999999999999997 4444 58999999999
Q ss_pred CCEEEEeccc-ccCCCCCCH--HHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 255 GILIWQDMMF-ACNNYPATP--TFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 255 GIlVw~e~~~-~~~~~~~~~--~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
||+|+.|+.. .+.....+| .|.....+.....|..+.++|-++.+..|||.-.
T Consensus 92 GIYvi~Dl~~p~~sI~r~~P~~sw~~~l~~~~~~vid~fa~Y~N~LgFf~GNEVin 147 (314)
T PF03198_consen 92 GIYVILDLNTPNGSINRSDPAPSWNTDLLDRYFAVIDAFAKYDNTLGFFAGNEVIN 147 (314)
T ss_dssp T-EEEEES-BTTBS--TTS------HHHHHHHHHHHHHHTT-TTEEEEEEEESSS-
T ss_pred CCEEEEecCCCCccccCCCCcCCCCHHHHHHHHHHHHHhccCCceEEEEecceeec
Confidence 9999999832 333333455 6777888888899999999999999999999854
No 48
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional
Probab=98.80 E-value=1.5e-09 Score=126.66 Aligned_cols=243 Identities=19% Similarity=0.215 Sum_probs=192.6
Q ss_pred ecCCCeEEEEEEecCCCC-ceeEEEEEEEEecCCCCC---ccccCc-------------CeEEeeccccccccCccc-cc
Q psy15568 925 NVSSRTLEVVLLNDPNRP-LHNVTIVTESYAWNDTRP---FRSVKT-------------PLVTVKLCAAEEIQGFFD-CP 986 (1231)
Q Consensus 925 ~~~~~~leL~lvnDa~~~-a~~i~v~ip~y~~~~~~p---~~~~~~-------------~~it~dlhss~~i~~ff~-ip 986 (1231)
+.|++.|||+++.|+++. +++|++++|||+|+++.. +++++. +++|+|+| +.++|+||+ +|
T Consensus 103 p~nd~lmeLll~idalragA~rIt~ViPY~~YaRQDr~~~~e~itak~vA~lL~~~G~d~vitvDlH-s~~i~~~F~~~p 181 (382)
T PRK06827 103 SPDDHFQDLKRTIDAIRGKARRITVIMPFLYESRQHKRKGRESLDCALALQELEELGVDNIITFDAH-DPRIENAIPLMG 181 (382)
T ss_pred CCcHHHHHHHHHHHHHhcCCCeEEEEeecccccccccccCCCCccHHHHHHHHHHcCCCeEEEecCC-hHHhcccCCCCC
Confidence 457889999999999983 579999999977777543 333332 24999999 589999998 58
Q ss_pred cccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCCCC
Q psy15568 987 VDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIAPP 1065 (1231)
Q Consensus 987 ~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1231)
++++.+.+.+..++.+.+. + ++. ....+.+++||.|++. |+.++..
T Consensus 182 vdnl~a~~~l~~~i~~~i~--~-l~~---d~~~~VVVsPD~Gg~~rA~~~A~~--------------------------- 228 (382)
T PRK06827 182 FENLYPSYQIIKALLKNEK--D-LEI---DKDHLMVISPDTGAMDRAKYYASV--------------------------- 228 (382)
T ss_pred cCCcCchHHHHHHHHHhcc--c-ccc---cCCCcEEEEECccchHHHHHHHHH---------------------------
Confidence 9999999999988865421 0 000 0134679999999977 7766654
Q ss_pred CCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceecc-CCCCCEEEEEecccCcHHHHHHHH
Q psy15568 1066 SSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVG-DVGGRVAIMVDDMVDDVHSFVAAA 1144 (1231)
Q Consensus 1066 ~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-~v~gk~~iivDDii~tG~T~~~~~ 1144 (1231)
++++.++++|+|..... . ...+....+.++| +|+||+|||||||||||+||.+++
T Consensus 229 -------Lg~~~ai~~K~R~~~~~----------~-------~g~~~~~~~~~~g~dV~gr~vIIVDDII~TG~Tl~~aa 284 (382)
T PRK06827 229 -------LGVDLGLFYKRRDYSRV----------V-------NGRNPIVAHEFLGRDVEGKDVLIVDDMIASGGSMIDAA 284 (382)
T ss_pred -------hCCCEEEEEcccCCccc----------c-------cCCCceEEEecCCcccCCCEEEEEeCCcCcHHHHHHHH
Confidence 23456778888864200 0 0012222345678 899999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEEecCCCCChhhhhhcC----CCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCCCCc
Q psy15568 1145 EVLKDRGAYKIYVLATHGLLSSDAPLLIEES----PIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESM 1220 (1231)
Q Consensus 1145 ~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~----~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~~s~ 1220 (1231)
+.|+++||++|+++|||++|+ +|.++|.++ ++++|++|||||++++.+.++|++++|||++||++|+++|+++|+
T Consensus 285 ~~Lk~~GA~~V~~~~tH~vf~-~a~~~l~~~~~~g~i~~iv~TdTi~~~~~~~~~~~~~~isva~llA~~I~~~~~~~s~ 363 (382)
T PRK06827 285 KELKSRGAKKIIVAATFGFFT-NGLEKFDKAYEEGYFDRIIGTNLVYHPEELLSKPWYIEVDMSKLIARIIDALNHDVSL 363 (382)
T ss_pred HHHHHcCCCEEEEEEEeecCh-HHHHHHHhhcccCCCCEEEEeCCCcCchhhcccCCeEEEEcHHHHHHHHHHHHcCCCH
Confidence 999999999999999999999 999999654 699999999999986544578999999999999999999999999
Q ss_pred cccccC
Q psy15568 1221 SYLFRN 1226 (1231)
Q Consensus 1221 ~~l~~~ 1226 (1231)
|+||++
T Consensus 364 s~l~~~ 369 (382)
T PRK06827 364 SKLLDP 369 (382)
T ss_pred HHHhCc
Confidence 999986
No 49
>KOG1448|consensus
Probab=98.77 E-value=7.7e-10 Score=120.66 Aligned_cols=232 Identities=36% Similarity=0.572 Sum_probs=192.4
Q ss_pred cCCCeEEEEEEecCCCC--ceeEEEEEEEEecCCC--CC--ccccC-------------cCeEEeeccccccccCccccc
Q psy15568 926 VSSRTLEVVLLNDPNRP--LHNVTIVTESYAWNDT--RP--FRSVK-------------TPLVTVKLCAAEEIQGFFDCP 986 (1231)
Q Consensus 926 ~~~~~leL~lvnDa~~~--a~~i~v~ip~y~~~~~--~p--~~~~~-------------~~~it~dlhss~~i~~ff~ip 986 (1231)
.|++.|||+++.+++++ ++++|+++|+|+|+++ .. +.++. ..++|+|+| +.|+||||++|
T Consensus 63 ind~lmELLI~I~ac~~asa~~vTaViP~Fpyarq~~k~~~r~~i~aklVanlls~aG~dhvItmDlH-a~Q~qgfF~ip 141 (316)
T KOG1448|consen 63 INDNLMELLIMINACKRASASRVTAVIPYFPYARQDKKDKSRAPILAKLVANLLSSAGADHVITMDLH-ASQIQGFFDIP 141 (316)
T ss_pred chHHHHHHHHHHHhcchhhhheeEEeccCCccccchhhhhhhhhHHHHHHHhhhhccCCceEEEeccc-chhhCceeecc
Confidence 46789999999999998 6999999999888774 22 33332 345999999 68999999999
Q ss_pred cccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCCCCCCCCCCCC
Q psy15568 987 VDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRASPPPSSIAPP 1065 (1231)
Q Consensus 987 ~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1231)
++++++.|.+.+|++.++ .+ ..+..+++||+|+.+ +.+++..
T Consensus 142 Vdnly~~p~~l~~ir~~~--~~--------~~~~vivSPdaGgaKR~~s~ad~--------------------------- 184 (316)
T KOG1448|consen 142 VDNLYAEPAVLNYIRENI--PD--------SENAVIVSPDAGGAKRVTSLADR--------------------------- 184 (316)
T ss_pred chhhccchHHHHHHHhhC--CC--------ccceEEECCCcchhhhhHHHHHh---------------------------
Confidence 999999999999997652 22 234569999999955 4444432
Q ss_pred CCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCC-CceeccCCCCCEEEEEecccCcHHHHHHHH
Q psy15568 1066 SSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKP-PISVVGDVGGRVAIMVDDMVDDVHSFVAAA 1144 (1231)
Q Consensus 1066 ~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~~v~gk~~iivDDii~tG~T~~~~~ 1144 (1231)
+....+.++|.|.. .++.. .|.++|||+||.|||||||++|++|+++++
T Consensus 185 -------l~~~fali~ker~k-----------------------~~~v~~~m~LVGDv~gkvailVDDm~dt~GTl~~aa 234 (316)
T KOG1448|consen 185 -------LNLDFALIHKERRK-----------------------ANEVDIRMVLVGDVKGKVAILVDDMADTCGTLIKAA 234 (316)
T ss_pred -------hcchhhhhhhhhhc-----------------------ccccceEEEEEeccCCcEEEEecccccccchHHHHH
Confidence 11223444554443 35555 889999999999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCcccccCCCeEEEechHHHHHHHHHHhCCCCccccc
Q psy15568 1145 EVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLF 1224 (1231)
Q Consensus 1145 ~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~~~~~~~~~~~~a~l~a~~i~~~~~~~s~~~l~ 1224 (1231)
+.|+++||++|++++|||+|++++++++.++.++++++|||+|+.++... +++.+||+++.+||+|+|.|+++|+|.||
T Consensus 235 ~~L~~~GA~kV~a~~THgVfs~~a~er~~~s~~~~~vvtnt~p~~~~~~~-~~~~~Idvs~~~ae~irr~h~gesvS~lf 313 (316)
T KOG1448|consen 235 DKLLEHGAKKVYAIVTHGVFSGPAIERLNESALDRVVVTNTIPIDDSCLE-PKLTTIDVSPVLAEAIRRTHNGESVSYLF 313 (316)
T ss_pred HHHHhcCCceEEEEEcceeccccHHHHhhhcccceEEEEEeecccccccC-CcccEEeeccccchheEEecCCeeeeeec
Confidence 99999999999999999999999999999999999999999999854333 78999999999999999999999999999
Q ss_pred cC
Q psy15568 1225 RN 1226 (1231)
Q Consensus 1225 ~~ 1226 (1231)
.+
T Consensus 314 ~~ 315 (316)
T KOG1448|consen 314 SH 315 (316)
T ss_pred cC
Confidence 75
No 50
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=98.66 E-value=6.2e-08 Score=103.09 Aligned_cols=44 Identities=25% Similarity=0.424 Sum_probs=40.5
Q ss_pred eccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEe
Q psy15568 1118 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 1161 (1231)
Q Consensus 1118 ~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th 1161 (1231)
..++++||+|+|||||+|||.|+.++++.|++.||++|++++-.
T Consensus 91 ~~~~v~gk~VLIVDDIidTG~Tl~~~~~~Lk~~Ga~~V~~avL~ 134 (181)
T PRK09162 91 PRESLKGRTVLVVDDILDEGHTLAAIRDRCLEMGAAEVYSAVLV 134 (181)
T ss_pred CCCCCCCCEEEEEccccCcHHHHHHHHHHHHhCCCCEEEEEEEE
Confidence 34689999999999999999999999999999999999999833
No 51
>PRK02304 adenine phosphoribosyltransferase; Provisional
Probab=98.64 E-value=1.1e-07 Score=100.91 Aligned_cols=68 Identities=21% Similarity=0.245 Sum_probs=52.4
Q ss_pred CCceeccC--CCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEE
Q psy15568 1114 PPISVVGD--VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVV 1181 (1231)
Q Consensus 1114 ~~~~~~~~--v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~ 1181 (1231)
+.+.+.++ ++|++|+||||+++||+|+.++++.|+++||+.|.++|.+..-..++.++++.-++..++
T Consensus 102 ~~l~l~~~~~~~g~~VLIVDDivtTG~Tl~~~~~~l~~~Ga~~v~v~vl~~~~~~~g~~~l~~~~~~sl~ 171 (175)
T PRK02304 102 DTLEIHKDAIKPGDRVLIVDDLLATGGTLEAAIKLLERLGAEVVGAAFVIELPDLGGREKLEGYPVKSLV 171 (175)
T ss_pred eEEEEchhhcCCCCEEEEEeCCccccHHHHHHHHHHHHcCCEEEEEEEEEEcccccchhhcCCCceEEEE
Confidence 44555554 899999999999999999999999999999999999987776543446666533344443
No 52
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=98.58 E-value=1.7e-07 Score=98.34 Aligned_cols=44 Identities=18% Similarity=0.295 Sum_probs=40.7
Q ss_pred eccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEe
Q psy15568 1118 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 1161 (1231)
Q Consensus 1118 ~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th 1161 (1231)
+.++++||+|+|||||++||+||.++++.|++.||++|.++|-+
T Consensus 78 ~~~~~~gk~vlivDDii~TG~Tl~~~~~~l~~~g~~~i~~~~l~ 121 (166)
T TIGR01203 78 LDLSIKGKDVLIVEDIVDTGLTLQYLLDLLKARKPKSLKIVTLL 121 (166)
T ss_pred CCCCCCCCEEEEEeeeeCcHHHHHHHHHHHHHCCCCEEEEEEEE
Confidence 45689999999999999999999999999999999999999944
No 53
>PRK11595 DNA utilization protein GntX; Provisional
Probab=98.55 E-value=5.6e-08 Score=107.26 Aligned_cols=52 Identities=23% Similarity=0.256 Sum_probs=47.7
Q ss_pred CCCCCCCCceeccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1108 HPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1108 ~~~~~~~~~~~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
+..|..+.+.+.++++||+|+|||||+|||.||.++++.|++.|+++|++++
T Consensus 171 R~~n~~~~f~~~~~~~~~~vllvDDv~tTG~Tl~~~~~~L~~~g~~~V~~~~ 222 (227)
T PRK11595 171 RKRNLKNAFRLELPVQGQHMAIVDDVVTTGSTVAEIAQLLLRNGAASVQVWC 222 (227)
T ss_pred HhhhhhhhhccCCCCCCCEEEEEeeeecchHHHHHHHHHHHHcCCcEEEEEE
Confidence 5556677888888999999999999999999999999999999999999987
No 54
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=98.55 E-value=1.8e-07 Score=101.85 Aligned_cols=69 Identities=32% Similarity=0.394 Sum_probs=60.0
Q ss_pred eeccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCcc
Q psy15568 1117 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIP 1187 (1231)
Q Consensus 1117 ~~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~ 1187 (1231)
.+.++++||+|||||||++||+|+..+++.|+++|+++|.++|. +++..+++++.++.=+--++|-.|-
T Consensus 117 ~lp~~i~~~~VllvDd~laTG~Tl~~ai~~L~~~G~~~I~~~~l--l~~~~gl~~l~~~~p~v~i~~~~iD 185 (209)
T PRK00129 117 KLPEDIDERTVIVVDPMLATGGSAIAAIDLLKKRGAKNIKVLCL--VAAPEGIKALEEAHPDVEIYTAAID 185 (209)
T ss_pred eCCCcCCCCEEEEECCcccchHHHHHHHHHHHHcCCCEEEEEEE--ecCHHHHHHHHHHCCCcEEEEEeec
Confidence 35668999999999999999999999999999999999999996 8889999999877555556666663
No 55
>COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
Probab=98.54 E-value=1.3e-08 Score=128.65 Aligned_cols=211 Identities=14% Similarity=0.058 Sum_probs=118.4
Q ss_pred ChhhhHHHHHHHhcC--cEEEEeCCCCCCcccccccccccc--cccCchhhHHhHHHHHHHhHHHHHHhhCCCCCcccCC
Q psy15568 719 GAAKKATSYAERLRL--GIAVIHGEQKESESDEYEVDLTRY--IRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSS 794 (1231)
Q Consensus 719 ~~~~Ea~~~v~Rlr~--SialW~G~NE~~~~~~~~~~~~~~--~~~~~~~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~SS 794 (1231)
-+.+|++.+|+|.|| ||++|||+||.......+.-...+ ..........++. -+...+...+.+-.|...||++|
T Consensus 380 ~~~~~i~~mver~knHPSIiiWs~gNE~~~g~~~~~~~~~~k~~d~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 458 (808)
T COG3250 380 EVSEEVRRMVERDRNHPSIIIWSLGNESGHGSNHWALYRWFKASDPTRPVQYEGRG-TEATDILSPMYERVDEILYFPGS 458 (808)
T ss_pred HHHHHHHHHHHhccCCCcEEEEeccccccCccccHHHHHHHhhcCCccceeccCcc-ceeeecccchhhcCccccccCCC
Confidence 356889999999995 999999999965433222211111 1122222222222 23334566777888888999999
Q ss_pred CCCCcCCcccccccCCCCCCCCCCCCcccCCcCCCCC----------CCcccc--ccCCCCCCC----------------
Q psy15568 795 PTNGIESEKAKYALADNPYSNIYGDSGWTGVSSPSPC----------PAPLLS--YHGDGSKEK---------------- 846 (1231)
Q Consensus 795 Ps~G~~~~~~~~~~~~~p~~~~~Gd~~~~~~~~~~p~----------~~~f~s--~~g~~~~~s---------------- 846 (1231)
|+.+..-+. +.-+...+.|+.++|.++...+. ..++.+ ++|++....
T Consensus 459 p~p~~l~~~-----~~~~~n~~~G~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~e~g~~~~~~~g~~~~~~~~~~~~~~ 533 (808)
T COG3250 459 PRPLILCEY-----AHAMGNSYGGDYHYWGVFGEYPRLQGGFIWDWVDQRLIPIDETGNQAYAYGGDFGDYPNDRSFELN 533 (808)
T ss_pred CCCceeecc-----hHhhccCcCCceeeeehhccccccccceehhhcccccCcccccCccccccccccCCCccccchhcc
Confidence 966654221 12223334455666665553221 123444 344332111
Q ss_pred -CCccccCCCC----Ccee-eechh--hhhhHHHHHHHHHHHHHHHHHHH--hhh----cce---------------eEE
Q psy15568 847 -PPISVVGDVG----GRVA-IMVDD--MVDDVHSFVAAAEVLKDRGAYKI--YVL----ATH---------------GLL 897 (1231)
Q Consensus 847 -~~~~~~g~~~----g~~~-~~~~~--~~~~~~~~v~~sq~~qa~~~~~i--~~~----~t~---------------Gsl 897 (1231)
+.+. .+++. .+.. ..... .++++..|++.+|++++++...- +.. .|+ +++
T Consensus 534 ~~v~~-~~~~~~~~~e~~~~~~~~~f~~~k~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pg~~~~~ 612 (808)
T COG3250 534 GLVFP-DRQPNPGLKEAKVGTQFWAFGDPKTFQGFLVTSENLFAEADRERLPKLRALLGETLGSLEWQLNDVPPGASWSS 612 (808)
T ss_pred ccccc-ccccCccchheeEEEeeeeeeccccCCceEEechhheeeeehhhhhhhhhccceEeeeEEEEeecCCCcccccc
Confidence 1111 12221 1111 12222 26777778999999988765411 111 133 245
Q ss_pred ecCCCCchhHHHHHHhhcccccccceeecCCCeEEEEEEe
Q psy15568 898 FDYDGNWKMLHYFARKFFAPVLISPVFNVSSRTLEVVLLN 937 (1231)
Q Consensus 898 iDy~GrwK~lhY~akr~~aPvlV~~~~~~~~~~leL~lvn 937 (1231)
+||.|+||+ ||.+|||++|+.+............+-..+
T Consensus 613 ~~~~~~~k~-~~l~~r~~~~~~~~~~~~~~~~~~~l~~~~ 651 (808)
T COG3250 613 LDEALRPKA-LYLTRRFTQPELTAWSEAAADGQFTLSEVS 651 (808)
T ss_pred cccccCCcc-eEEEEEEeccccchhhhhcccceeeecccc
Confidence 899999999 999999999999887554334444444444
No 56
>TIGR00201 comF comF family protein. This protein is found in species that do (Bacillus subtilis, Haemophilus influenzae) or do not (E. coli, Borrelia burgdorferi) have described systems for natural transformation with exogenous DNA. It is involved in competence for transformation in Bacillus subtilis.
Probab=98.53 E-value=5.5e-08 Score=104.47 Aligned_cols=67 Identities=18% Similarity=0.198 Sum_probs=54.1
Q ss_pred cccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccC-CCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1081 DGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGD-VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1081 ~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
.+.+. ..|..|.+.. +..|..+.|.+.++ ++||+|+|||||+|||.|+.++++.|+++||++|.+++
T Consensus 120 ~r~~~-~~Q~~l~~~~-----------R~~n~~~~f~~~~~~~~~~~vllvDDV~TTGaTl~~~~~~L~~~Ga~~V~~~~ 187 (190)
T TIGR00201 120 IRLNN-ETQSKLKATL-----------RFLNLENAFDLKNNSFQGRNIVLVDDVVTTGATLHEIARLLLELGAASVQVWT 187 (190)
T ss_pred EEecc-cccccCCHHH-----------HHHHHhCcEEccCCCCCCCEEEEEeeeeccHHHHHHHHHHHHHcCCCEEEEEE
Confidence 34444 4565555544 44577778877664 89999999999999999999999999999999999987
No 57
>PRK07322 adenine phosphoribosyltransferase; Provisional
Probab=98.48 E-value=3.3e-07 Score=97.31 Aligned_cols=139 Identities=11% Similarity=0.082 Sum_probs=82.0
Q ss_pred ccccCccccccccccCchHHHHHHHhccccccCccccccccCCCcEEeecchhhH-HHHHHHhhcccchhhhhhccCCCC
Q psy15568 977 EEIQGFFDCPVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISILL-SEAIRRMHNKESMSYLFRNVDGRA 1055 (1231)
Q Consensus 977 ~~i~~ff~ip~~~l~~~~~l~~~l~~~~~~~n~v~~~~~~~~~p~l~~pD~g~~~-a~~i~~~~~~~~~~~~~~~~~~~~ 1055 (1231)
.+++++|.++...+...+.+.+.+-..+. ..++. ....+++++.|++. |..+++.++.
T Consensus 18 ~~~~~~~~i~~~k~~~dp~l~~~~~~~La--~~l~~-----~~d~Iv~v~~gGiplA~~lA~~L~~-------------- 76 (178)
T PRK07322 18 IRVGPDLAIALFVILGDTELTEAAAEALA--KRLPT-----EVDVLVTPETKGIPLAHALSRRLGK-------------- 76 (178)
T ss_pred eEeCCCCEEEEEhhhCCHHHHHHHHHHHH--HHcCC-----CCCEEEEeccCCHHHHHHHHHHHCC--------------
Confidence 57888889999998888877666543221 11111 23568899999988 8878775331
Q ss_pred CCCCCCCCCCCCCcccccccccccccccCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCCCEEEEEecccC
Q psy15568 1056 SPPPSSIAPPSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVD 1135 (1231)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~gk~~iivDDii~ 1135 (1231)
+...+.|.+....+..+- ...+.............. ...++++||+|+||||+++
T Consensus 77 --------------------p~~~~~k~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~gk~VLIVDDiit 131 (178)
T PRK07322 77 --------------------PYVVARKSRKPYMQDPII----QEVVSITTGKPQLLVLDG-ADAEKLKGKRVAIVDDVVS 131 (178)
T ss_pred --------------------CEEEEEEeCCCCCCCceE----EEEEEEEeccceEEEecC-ccccccCCCEEEEEecccc
Confidence 112222222211100000 000000000000000000 1123589999999999999
Q ss_pred cHHHHHHHHHHHHhcCCCeEEEEEEe
Q psy15568 1136 DVHSFVAAAEVLKDRGAYKIYVLATH 1161 (1231)
Q Consensus 1136 tG~T~~~~~~~l~~~ga~~v~~~~th 1161 (1231)
||+|+.++++.|+++||+.|.+++.-
T Consensus 132 TG~Tl~aa~~~L~~~GA~~V~~~~v~ 157 (178)
T PRK07322 132 TGGTLTALERLVERAGGQVVAKAAIF 157 (178)
T ss_pred ccHHHHHHHHHHHHcCCEEEEEEEEE
Confidence 99999999999999999999988843
No 58
>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional
Probab=98.47 E-value=5e-07 Score=97.69 Aligned_cols=60 Identities=22% Similarity=0.396 Sum_probs=48.2
Q ss_pred cCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEE
Q psy15568 1120 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVV 1182 (1231)
Q Consensus 1120 ~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~ 1182 (1231)
++++||+|+||||+++||+|+.++++.|+++||+.|.++| ++.....+.+...++..++.
T Consensus 136 ~~~~gk~VlIVDDVitTG~Tl~~ai~~l~~~Ga~~v~v~v---lvdk~g~~~~~~vpv~sl~~ 195 (200)
T PRK02277 136 ASVEGKRCVIVDDVITSGTTMKETIEYLKEHGGKPVAVVV---LIDKSGIDEIDGVPVYSLIR 195 (200)
T ss_pred ccCCcCEEEEEeeccCchHHHHHHHHHHHHcCCEEEEEEE---EEECcchhhhcCCCeEEEEE
Confidence 5789999999999999999999999999999999999988 44444455554445555553
No 59
>PRK13812 orotate phosphoribosyltransferase; Provisional
Probab=98.43 E-value=1.3e-06 Score=92.35 Aligned_cols=58 Identities=22% Similarity=0.295 Sum_probs=45.3
Q ss_pred ccCC-CCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCC
Q psy15568 1119 VGDV-GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 1177 (1231)
Q Consensus 1119 ~~~v-~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~ 1177 (1231)
.|++ +|++|+||||+++||+|+.++++.|++.|++.+.++|.--. ..+..+++++.++
T Consensus 101 ~g~~~~g~~VlIVDDvitTG~Tl~~~~~~l~~~Ga~vv~~~vlvdr-~~~~~~~l~~~g~ 159 (176)
T PRK13812 101 EGRLDEGEEVVVLEDIATTGQSAVDAVEALREAGATVNRVLVVVDR-EEGARENLADHDV 159 (176)
T ss_pred EecCCCcCEEEEEEEeeCCCHHHHHHHHHHHHCCCeEEEEEEEEEC-CcchHHHHHhcCC
Confidence 3666 89999999999999999999999999999997777763322 1344566665554
No 60
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=98.42 E-value=3.7e-07 Score=95.78 Aligned_cols=85 Identities=24% Similarity=0.228 Sum_probs=67.3
Q ss_pred cCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCccCCccc-ccCCCe
Q psy15568 1120 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQK-LQCPKI 1198 (1231)
Q Consensus 1120 ~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~~~~~~-~~~~~~ 1198 (1231)
-+++||+||||||.|.||.||..+++.|+++|+++|++++ |+++.++.+.|+ +-.|+|+|..+-..-... ..-..+
T Consensus 120 ~~~~g~~VIlVDDGiATGatm~aAi~~~r~~~~~~IviAV--PV~p~~a~~~l~-s~~D~vvc~~~P~~F~AVg~~Y~dF 196 (220)
T COG1926 120 PSLKGRTVILVDDGIATGATMKAAVRALRAKGPKEIVIAV--PVAPEDAAAELE-SEADEVVCLYMPAPFEAVGEFYRDF 196 (220)
T ss_pred CCCCCCEEEEEeCCcchhHHHHHHHHHHHhcCCceEEEEc--ccCCHHHHHHHH-hhcCeEEEEcCCccHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999999 999999999995 779999988764321111 112345
Q ss_pred EEEechHHH
Q psy15568 1199 KTVDISILL 1207 (1231)
Q Consensus 1199 ~~~~~a~l~ 1207 (1231)
++++-++..
T Consensus 197 ~q~sdeEV~ 205 (220)
T COG1926 197 RQVSDEEVR 205 (220)
T ss_pred hhcCHHHHH
Confidence 566555443
No 61
>PRK13809 orotate phosphoribosyltransferase; Provisional
Probab=98.38 E-value=1.6e-06 Score=93.73 Aligned_cols=59 Identities=22% Similarity=0.233 Sum_probs=45.5
Q ss_pred eccC-CCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCC
Q psy15568 1118 VVGD-VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 1177 (1231)
Q Consensus 1118 ~~~~-v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~ 1177 (1231)
+.|. .+|++|+||||+++||+|+.++++.|++.|++.+.++|.-... .++.+++.+.++
T Consensus 111 ~~g~~~~g~~VlIVDDViTTG~Ti~~a~~~L~~~G~~vv~v~vlvdr~-~~~~~~l~~~gi 170 (206)
T PRK13809 111 VEGLFTPGQTCLVINDMVSSGKSIIETAVALEEEGLVVREALVFLDRQ-KGACQPLGPQGI 170 (206)
T ss_pred EccccCCCCEEEEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEECc-ccHHHHHHhcCC
Confidence 3443 5999999999999999999999999999999977766643322 356677765443
No 62
>PRK07272 amidophosphoribosyltransferase; Provisional
Probab=98.35 E-value=4.9e-07 Score=109.27 Aligned_cols=99 Identities=18% Similarity=0.205 Sum_probs=75.7
Q ss_pred CCCCCcee-ccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCC-ccC
Q psy15568 1111 KEKPPISV-VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNT-IPH 1188 (1231)
Q Consensus 1111 ~~~~~~~~-~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~t-i~~ 1188 (1231)
+....+.. .+.++||+|+||||+|+||.|+.++++.|+++||++|.++++||.+..+..--|.-+..++++..+. +..
T Consensus 336 ~vr~~f~~~~~~~~gk~vllVDDvittG~T~~~~~~~L~~~Ga~~v~~~~~~p~~~~~c~ygid~~~~~~lia~~~~~~e 415 (484)
T PRK07272 336 GVRMKLSAVSGVVKGKRVVMVDDSIVRGTTSRRIVQLLKEAGAKEVHVAIASPELKYPCFYGIDIQTRRELISANHSVEE 415 (484)
T ss_pred HHhhCccccccccCCCEEEEEccccCchHHHHHHHHHHHhcCCcEEEEEEeCCccccChhhhccCcCHHHHHhcCCCHHH
Confidence 44444543 4678999999999999999999999999999999999999999999988876665555666555443 211
Q ss_pred CcccccCCCeEEEechHHHHH
Q psy15568 1189 DVQKLQCPKIKTVDISILLSE 1209 (1231)
Q Consensus 1189 ~~~~~~~~~~~~~~~a~l~a~ 1209 (1231)
-.+....+-+..+++..|+.-
T Consensus 416 i~~~~~~dsl~~~~~~~l~~~ 436 (484)
T PRK07272 416 ICDIIGADSLTYLSVDGLIES 436 (484)
T ss_pred HHHHhCCCEEEEecHHHHHHH
Confidence 122345677899999887654
No 63
>TIGR01090 apt adenine phosphoribosyltransferase. A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.
Probab=98.34 E-value=1.9e-06 Score=90.82 Aligned_cols=53 Identities=17% Similarity=0.190 Sum_probs=45.3
Q ss_pred CCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhc
Q psy15568 1122 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEE 1174 (1231)
Q Consensus 1122 v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~ 1174 (1231)
.+||+||||||+++||+|+.++++.|+++||+.|.+++.-..-..++.+.+.+
T Consensus 107 ~~gk~VLIVDDIitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~g~~~i~~ 159 (169)
T TIGR01090 107 KPGQRVLIVDDLLATGGTAEATDELIRKLGGEVVEAAFLIELKDLNGRAKLEP 159 (169)
T ss_pred CCcCEEEEEeccccchHHHHHHHHHHHHcCCEEEEEEEEEEccccChHHHhcc
Confidence 59999999999999999999999999999999888888655544456677754
No 64
>COG1040 ComFC Predicted amidophosphoribosyltransferases [General function prediction only]
Probab=98.33 E-value=4.4e-07 Score=99.70 Aligned_cols=66 Identities=20% Similarity=0.326 Sum_probs=57.1
Q ss_pred cCCCCCCCCCCCCccccccccCCCCCCCCCCCCceeccCCCC-CEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1083 RASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGG-RVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1083 ~r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~v~g-k~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
++...+|..+.++. ...|..+.|.+.+.++. |+|+|||||+|||.|+.++++.|++.||++|.+++
T Consensus 153 ~k~~~~q~~l~~~~-----------rr~nl~~aF~~~~~~~~~~~vlLvDDV~TTGaTl~~~~~~L~~~Ga~~v~~~~ 219 (225)
T COG1040 153 VKDTSPQQGLKALE-----------RRRNLKGAFRLKKGIEEPKNVLLVDDVYTTGATLKEAAKLLREAGAKRVFVLT 219 (225)
T ss_pred HhccccccccchHH-----------HHHhccCCeecCCCCCCCCeEEEEecccccHHHHHHHHHHHHHcCCceEEEEE
Confidence 34555666666666 67788899999988877 99999999999999999999999999999999987
No 65
>PRK12560 adenine phosphoribosyltransferase; Provisional
Probab=98.33 E-value=2.1e-06 Score=91.78 Aligned_cols=70 Identities=11% Similarity=0.200 Sum_probs=50.6
Q ss_pred ceeccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhh-hcC--CCCEEEEeCC
Q psy15568 1116 ISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLI-EES--PIDEVVVTNT 1185 (1231)
Q Consensus 1116 ~~~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l-~~~--~~~~i~~t~t 1185 (1231)
+.+.+..+|++|+||||+++||+|+.++++.|+++||..+.++|.--.-..++.+.+ ++. ++..++..+.
T Consensus 106 ~~~~~~~~G~rVlIVDDvitTG~T~~~ai~ll~~aGa~vv~v~~vvd~~~~~g~~~l~~~~gv~v~sl~~~~~ 178 (187)
T PRK12560 106 VYLNGIEKGDRVAIIDDTLSTGGTVIALIKAIENSGGIVSDVICVIEKTQNNGRKKLFTQTGINVKSLVKIDV 178 (187)
T ss_pred eEccCCCCcCEEEEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchHHHHhhccCCcEEEEEEEEE
Confidence 444566799999999999999999999999999999998777764433222445666 323 3445544443
No 66
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=98.31 E-value=2e-06 Score=91.19 Aligned_cols=44 Identities=25% Similarity=0.359 Sum_probs=40.2
Q ss_pred eeccCCCCCEEEEEecccCcHHHHHHHHHHHHhcC-CCeEEEEEE
Q psy15568 1117 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRG-AYKIYVLAT 1160 (1231)
Q Consensus 1117 ~~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~g-a~~v~~~~t 1160 (1231)
.+.++++||+|||||||+|||+||.++++.|++.| +++|.+++-
T Consensus 88 ~l~~~v~gr~VLIVDDIidTG~Tl~~~~~~L~~~G~~~~v~~avL 132 (176)
T PRK05205 88 DIPFDIEGKRVILVDDVLYTGRTIRAALDALFDYGRPARVQLAVL 132 (176)
T ss_pred cCCCCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 45678999999999999999999999999999999 788988884
No 67
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=98.29 E-value=1.7e-06 Score=91.51 Aligned_cols=41 Identities=20% Similarity=0.390 Sum_probs=38.9
Q ss_pred ccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1119 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1119 ~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
..+++||+|||||||+|||.||.++.+.|++.||++|.+++
T Consensus 87 ~~~v~gk~VLlVDDIiDTG~TL~~l~~~l~~~~~~~v~~av 127 (178)
T PRK15423 87 DEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICT 127 (178)
T ss_pred CCCCCCCEEEEEeeecCchHHHHHHHHHHHhCCCCEEEEEE
Confidence 35799999999999999999999999999999999999998
No 68
>KOG2024|consensus
Probab=98.22 E-value=1.9e-06 Score=92.73 Aligned_cols=116 Identities=24% Similarity=0.306 Sum_probs=75.3
Q ss_pred ccEEEEEEccceEeeeEEEEEeeCCcceEEEEEEEEEEeccccceeEEEEEEEEEeCCcceEEeeeeeeecCCCceEEEE
Q psy15568 43 KSVELEGYHVARIRDILTDITYHEDLKSWHLSVRVILEAGLSQAVVKAKLTAELAVGKKPLRVDSLVNAEPSHGEIEVVS 122 (1231)
Q Consensus 43 r~V~L~~~~~~~I~~~~v~~~~~~~~~~~~v~v~v~l~n~~~~~~~~~~l~~~i~~~~~~~~~~~~~~v~~~~g~~~~~~ 122 (1231)
|.|.|...+-++|+++.|.+.+..+...+. ..+ .... ..+....-+....... +++. -
T Consensus 181 ~sv~l~t~p~vyi~~~~v~t~l~~~~~~a~----~~v---~~~~---~~~~~~~~~~~~~~~~----------~~~~--~ 238 (297)
T KOG2024|consen 181 RSVCLYTTPVVYIEDITVTTGLPHDSGCAS----YHV---GDGG---VGVQMQEGPRRLDVVC----------GQQA--G 238 (297)
T ss_pred eeeeeccCCeEEecCcceeeccccCCccee----Eee---cccc---eeeeeccccceeeEEE----------eecc--c
Confidence 999999999999999999887764321111 111 1000 0111100000000000 1100 1
Q ss_pred EEEecCCCcccCCCCCCCCCCcEEEEEEEEe-CcEEEEEEEeEEEEEEEEeecCCCCccccCCcEEEEEECCee
Q psy15568 123 TLMVLASEVELWWPNGYGEQPLYNLQITLAS-GVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVP 195 (1231)
Q Consensus 123 ~~~i~~~~p~LWwP~g~G~P~LY~l~v~l~~-g~~~D~~~~~fGfR~ve~~~~~~~~~~~~~G~~f~f~lNG~p 195 (1231)
.+.+ +++++|||.+|+.+.||.+++.+.. |...|.....+|||++.+.. ++ ++|||+|
T Consensus 239 ~~~~--~~~~~wwP~~mh~~~ly~lev~l~l~g~lqd~y~~~~gfrt~~~~n---------~~----~~ln~kp 297 (297)
T KOG2024|consen 239 LLFV--PNYQLWWPYLMHLGPLYSLEVVLELIGTLQDCYRLPVGFRTVNWGN---------SQ----GLLNGKP 297 (297)
T ss_pred cccc--ccccccchhhhcCCcccceEEEEEEeeehhhhhhccCceEEEEecC---------cc----ceecCCC
Confidence 2334 7999999999999999999999988 87889999999999999943 22 8999986
No 69
>PRK13811 orotate phosphoribosyltransferase; Provisional
Probab=98.18 E-value=7.1e-06 Score=86.48 Aligned_cols=85 Identities=16% Similarity=0.204 Sum_probs=70.2
Q ss_pred HHHHHHhhccCcceEEEEecccccccccc-CcccccccCchhHHHHhhhhCC-CCCCcEEEecCCChhhhHHHHHHhhCC
Q psy15568 583 KLLAKMMCTSGLKHIITMDLHQKEIQGFF-DCPVDNLRASPFLLQYIQDSIP-DYKNAVIVAKNPGAAKKATSYAERLRL 660 (1231)
Q Consensus 583 k~va~ll~~~g~d~vitvDlHs~~~~~~F-~~p~~~l~a~~~l~~~l~~~~~-~~~~~viVsPD~G~~kra~~~A~~L~~ 660 (1231)
..++++|..+|++++-++|+||.+.++|| +++ .+...|.+.+++.+.+. ..+--+|++|+.|+..+|..+|..|++
T Consensus 3 ~~~~~~l~~~ga~~~g~f~L~SG~~s~~y~d~~--~l~~~p~~~~~l~~~l~~~~~~d~Vvg~~~gGi~~A~~~a~~l~~ 80 (170)
T PRK13811 3 NTIAELLISYKAIEFGDFTLASGAKSRYYIDIK--TAITHPALLKEIAAEVAKRYDFDVVAGVAVGGVPLAVAVSLAAGK 80 (170)
T ss_pred HHHHHHHHHCCCEEECCEEEccCCcCCEEEeCc--hhccCHHHHHHHHHHHHhhCCCCEEEecCcCcHHHHHHHHHHHCC
Confidence 35789999999999999999999999998 444 57778888777765431 123348999999999999999999999
Q ss_pred cEEEEeccc
Q psy15568 661 GIAVIHGEQ 669 (1231)
Q Consensus 661 ~~~~~~k~r 669 (1231)
|++++.|++
T Consensus 81 p~~~~rK~~ 89 (170)
T PRK13811 81 PYAIIRKEA 89 (170)
T ss_pred CEEEEecCC
Confidence 999998775
No 70
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=98.17 E-value=2.4e-06 Score=84.99 Aligned_cols=45 Identities=29% Similarity=0.380 Sum_probs=41.4
Q ss_pred eeccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEe
Q psy15568 1117 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 1161 (1231)
Q Consensus 1117 ~~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th 1161 (1231)
.....++||+|+||||+++||+|+.++++.|+++|++.|.+++.|
T Consensus 81 ~~~~~~~gk~vliVDDvi~tG~Tl~~~~~~L~~~g~~~v~~~vl~ 125 (125)
T PF00156_consen 81 IDKEDIKGKRVLIVDDVIDTGGTLKEAIELLKEAGAKVVGVAVLV 125 (125)
T ss_dssp EESSSGTTSEEEEEEEEESSSHHHHHHHHHHHHTTBSEEEEEEEE
T ss_pred cccccccceeEEEEeeeEcccHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 345678999999999999999999999999999999999999865
No 71
>TIGR00336 pyrE orotate phosphoribosyltransferase. The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.
Probab=98.17 E-value=1.2e-05 Score=85.17 Aligned_cols=56 Identities=20% Similarity=0.307 Sum_probs=43.8
Q ss_pred cC-CCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcC
Q psy15568 1120 GD-VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEES 1175 (1231)
Q Consensus 1120 ~~-v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~ 1175 (1231)
|. .+|++|+||||+++||+|+.++++.|+++|++.+.++|---.-..++.+++.+.
T Consensus 103 g~~~~g~~VlIVDDvi~TG~Tl~~a~~~l~~~Ga~v~~~~vlvdr~~~~~~~~l~~~ 159 (173)
T TIGR00336 103 GELLEGDKVVVVEDVITTGTSILEAVEIIQAAGGQVAGVIIAVDRQERSAGQEFEKE 159 (173)
T ss_pred cCCCCCCEEEEEeccccChHHHHHHHHHHHHcCCeEEEEEEEEecCchhHHHHHHHh
Confidence 44 489999999999999999999999999999998777773332222356777543
No 72
>PRK09123 amidophosphoribosyltransferase; Provisional
Probab=98.13 E-value=2.7e-06 Score=103.20 Aligned_cols=82 Identities=15% Similarity=0.188 Sum_probs=65.7
Q ss_pred CCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE-----EecCCCC---ChhhhhhcCCCCEEEEeCCccCCccc
Q psy15568 1121 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA-----THGLLSS---DAPLLIEESPIDEVVVTNTIPHDVQK 1192 (1231)
Q Consensus 1121 ~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~-----th~~~~~---~a~~~l~~~~~~~i~~t~ti~~~~~~ 1192 (1231)
.++||+||||||+|+||.|+.++++.|+++||++|.+++ +||.|.+ ++.++|..+.. ++..-.+.
T Consensus 357 ~~~gk~vvlvDD~i~tG~Tl~~~~~~l~~~Ga~~v~~~~~~p~~~~~~~~gid~~~~~~l~~~~~-------~~~ei~~~ 429 (479)
T PRK09123 357 VIEGKRVVLVDDSIVRGTTSRKIVQMLRDAGAKEVHLRIASPPITHPCFYGIDTPERSKLLAATH-------SLEEMAEY 429 (479)
T ss_pred ccCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEcCCCCccceeecCCCCCHHHHHHcCC-------CHHHHHHH
Confidence 379999999999999999999999999999999999999 9999999 77777755542 22221123
Q ss_pred ccCCCeEEEechHHHHH
Q psy15568 1193 LQCPKIKTVDISILLSE 1209 (1231)
Q Consensus 1193 ~~~~~~~~~~~a~l~a~ 1209 (1231)
...+-|..+|+..|+.-
T Consensus 430 igadsl~yls~~~l~~a 446 (479)
T PRK09123 430 IGADSLAFLSIDGLYRA 446 (479)
T ss_pred hCCCeEeccCHHHHHHH
Confidence 44567889999887544
No 73
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=98.12 E-value=3.7e-06 Score=91.49 Aligned_cols=57 Identities=30% Similarity=0.457 Sum_probs=51.8
Q ss_pred eeccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcC
Q psy15568 1117 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEES 1175 (1231)
Q Consensus 1117 ~~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~ 1175 (1231)
.+-++++||+|||||||++||+|+..+++.|+++|+++|.++|. +++..+++++.+.
T Consensus 115 ~lp~~i~~~~VllvDd~laTG~Tl~~ai~~L~~~G~~~I~v~~l--l~~~~gl~~l~~~ 171 (207)
T TIGR01091 115 KLPEDIDERTVIVLDPMLATGGTMIAALDLLKKRGAKKIKVLSI--VAAPEGIEAVEKA 171 (207)
T ss_pred cCCCCCCCCEEEEECCCccchHHHHHHHHHHHHcCCCEEEEEEE--ecCHHHHHHHHHH
Confidence 34568999999999999999999999999999999999999995 8889999999754
No 74
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=98.10 E-value=1e-05 Score=86.69 Aligned_cols=47 Identities=34% Similarity=0.466 Sum_probs=42.2
Q ss_pred ccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCCh
Q psy15568 1119 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDA 1168 (1231)
Q Consensus 1119 ~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a 1168 (1231)
..+++||+|+|||||+|||.||.++++.|++.||++|.++| ++....
T Consensus 92 ~~~v~gk~VliVDDIidTG~Tl~~~~~~l~~~g~~~v~~av---L~dK~~ 138 (189)
T PLN02238 92 KIDVKGKHVLLVEDIVDTGNTLSALVAHLEAKGAASVSVCA---LLDKRA 138 (189)
T ss_pred CCCCCCCEEEEEecccchHHHHHHHHHHHHhCCCCEEEEEE---EEECCc
Confidence 35799999999999999999999999999999999999998 555554
No 75
>PRK00455 pyrE orotate phosphoribosyltransferase; Validated
Probab=98.09 E-value=2.1e-05 Score=85.49 Aligned_cols=56 Identities=20% Similarity=0.257 Sum_probs=44.8
Q ss_pred CCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCC
Q psy15568 1121 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 1177 (1231)
Q Consensus 1121 ~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~ 1177 (1231)
.++||+|+||||+++||+|+.++++.|++.||+.|.++|-...- .+..+++++.++
T Consensus 110 ~~~g~~VliVDDvi~tG~Tl~~~~~~l~~~Ga~~v~~~vlv~~~-~~~~~~~~~~g~ 165 (202)
T PRK00455 110 RLFGKRVLVVEDVITTGGSVLEAVEAIRAAGAEVVGVAVIVDRQ-SAAQEVFADAGV 165 (202)
T ss_pred CCCCCEEEEEecccCCcHHHHHHHHHHHHcCCEEEEEEEEEECc-chHHHHHHhcCC
Confidence 35899999999999999999999999999999998888855442 233455555554
No 76
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=98.01 E-value=9.3e-06 Score=97.54 Aligned_cols=91 Identities=13% Similarity=0.181 Sum_probs=58.0
Q ss_pred ccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeC-CccCCcccccCCC
Q psy15568 1119 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTN-TIPHDVQKLQCPK 1197 (1231)
Q Consensus 1119 ~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~-ti~~~~~~~~~~~ 1197 (1231)
.+.++||+|+||||+|+||.|+.++++.|+++||++|.+.++=|-+-.+..--+.=+.-++++..+ ++..-.+....+-
T Consensus 329 ~~~v~gk~VlLVDD~IttGtTl~~~~~~L~~aGAk~V~~~~~spp~~~pc~~gid~~~~~~lia~~~~~eei~~~ig~ds 408 (442)
T PRK08341 329 REVINGKRVVLVDDSIVRGTTMKRIVKMLRDAGAREVHVRIASPPIRYPCYMGIDIPTRHELIAAWGSVEDIRKEIGADS 408 (442)
T ss_pred ccccCCCEEEEEeeeeccHHHHHHHHHHHHhcCCcEEEEEEcCCCccCCCceeeecCCHHHHhhcCCCHHHHHHHhCCCE
Confidence 466899999999999999999999999999999999999886554332221111101111222222 1111112334567
Q ss_pred eEEEechHHHHH
Q psy15568 1198 IKTVDISILLSE 1209 (1231)
Q Consensus 1198 ~~~~~~a~l~a~ 1209 (1231)
|..+|+..|+.-
T Consensus 409 l~~ls~e~l~~~ 420 (442)
T PRK08341 409 LAYLSVEGLKRA 420 (442)
T ss_pred EeccCHHHHHHH
Confidence 888888777543
No 77
>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family. This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.
Probab=97.97 E-value=1.5e-05 Score=85.16 Aligned_cols=41 Identities=17% Similarity=0.230 Sum_probs=37.3
Q ss_pred CCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEec
Q psy15568 1122 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG 1162 (1231)
Q Consensus 1122 v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~ 1162 (1231)
.+||+|+||||+++||+||.++++.|+++||+.|.+++-.-
T Consensus 103 ~~G~~VLIVDDIi~TG~Tl~~a~~~l~~~Ga~vv~~~vlid 143 (187)
T TIGR01367 103 KPGEKFVAVEDVVTTGGSLLEAIRAIEGQGGQVVGLACIID 143 (187)
T ss_pred CCCCEEEEEEeeecchHHHHHHHHHHHHcCCeEEEEEEEEE
Confidence 48999999999999999999999999999999888877443
No 78
>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]
Probab=97.97 E-value=5.8e-06 Score=83.76 Aligned_cols=42 Identities=24% Similarity=0.435 Sum_probs=39.0
Q ss_pred eccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1118 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1118 ~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
..+.|+||+|+||||+++||.|+.++++.|++.|++.+.|.+
T Consensus 135 NFa~V~gK~cvIVDDvittG~Ti~E~Ie~lke~g~kpv~v~V 176 (203)
T COG0856 135 NFASVEGKRCVIVDDVITTGSTIKETIEQLKEEGGKPVLVVV 176 (203)
T ss_pred ccccccCceEEEEecccccChhHHHHHHHHHHcCCCcEEEEE
Confidence 346799999999999999999999999999999999988877
No 79
>PRK09246 amidophosphoribosyltransferase; Provisional
Probab=97.93 E-value=6.5e-06 Score=100.89 Aligned_cols=52 Identities=15% Similarity=0.300 Sum_probs=44.0
Q ss_pred CCCCCcee-ccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEec
Q psy15568 1111 KEKPPISV-VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG 1162 (1231)
Q Consensus 1111 ~~~~~~~~-~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~ 1162 (1231)
+....+.+ ...++||+|+||||+++||.|+.++++.|+++||++|.+++.=+
T Consensus 344 ~vr~~f~~~~~~v~gK~VlLVDDvitTGaTl~~~~~~L~~aGA~~V~v~v~ap 396 (501)
T PRK09246 344 SVRQKLNAIRAEFKGKNVLLVDDSIVRGTTSEQIVQMAREAGAKKVYFASAAP 396 (501)
T ss_pred HHHhhcCCccccccCCeEEEEeccccccHHHHHHHHHHHHcCCCEEEEEEEcc
Confidence 44444443 34699999999999999999999999999999999999998633
No 80
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=97.92 E-value=1.1e-05 Score=82.94 Aligned_cols=44 Identities=25% Similarity=0.493 Sum_probs=41.1
Q ss_pred ceeccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1116 ISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1116 ~~~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
..+-.+++||+|+|||||+|||.||..+.+.|+.+||++|..|+
T Consensus 85 kDld~di~grdVLiVeDIiDsG~TLs~i~~~l~~r~a~sv~i~t 128 (178)
T COG0634 85 KDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLKERGAKSVRIAT 128 (178)
T ss_pred cccccCCCCCeEEEEecccccChhHHHHHHHHHhCCCCeEEEEE
Confidence 34567899999999999999999999999999999999999998
No 81
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=97.92 E-value=3.4e-05 Score=82.53 Aligned_cols=72 Identities=15% Similarity=0.258 Sum_probs=50.6
Q ss_pred CceeccC-C-CCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCC--CCEEEEeCCc
Q psy15568 1115 PISVVGD-V-GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP--IDEVVVTNTI 1186 (1231)
Q Consensus 1115 ~~~~~~~-v-~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~--~~~i~~t~ti 1186 (1231)
.+.+.++ + +|++|+||||+++||+|+.++++.++++||+-+.+++.--.-..+..+++.+.+ +..++....+
T Consensus 106 ~l~i~~~~i~~G~rVlIVDDviaTGgT~~a~~~lv~~aGa~vvgv~~lvd~~~~~g~~~l~~~g~~~~sl~~~~~~ 181 (189)
T PRK09219 106 TVSVSKKFLSEGDRVLIIDDFLANGQAALGLIDIIEQAGAKVAGIGIVIEKSFQDGRKLLEEKGYRVESLARIASL 181 (189)
T ss_pred EEEEEhhhCCCCCEEEEEeehhhcChHHHHHHHHHHHCCCEEEEEEEEEEccCccHHHHHHhcCCcEEEEEEeeec
Confidence 3444443 3 899999999999999999999999999999877777633221224567775544 4455544443
No 82
>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional
Probab=97.87 E-value=1.7e-05 Score=87.42 Aligned_cols=41 Identities=20% Similarity=0.317 Sum_probs=39.1
Q ss_pred ccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1119 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1119 ~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
..+++||+|||||||+|||.||.++++.|++.|+++|.++|
T Consensus 145 ~~~l~gk~VLIVDDIidTG~Tl~~~~~~L~~~g~~~V~va~ 185 (241)
T PTZ00149 145 LSCLKDKHVLIVEDIIDTGNTLVKFCEYLKKFEPKTIRIAT 185 (241)
T ss_pred ccccCCCEEEEEEeEeChHHHHHHHHHHHHhcCCCEEEEEE
Confidence 45799999999999999999999999999999999999998
No 83
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=97.85 E-value=6.2e-05 Score=85.42 Aligned_cols=109 Identities=22% Similarity=0.208 Sum_probs=80.4
Q ss_pred ECCeeEEEecceecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEEccCC--CCCC--------h------HHHHHHHhHc
Q psy15568 191 VNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGG--GVYM--------S------DYFYETCDEL 254 (1231)
Q Consensus 191 lNG~pvflrG~n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~wgg--g~~~--------~------~~fydlcDe~ 254 (1231)
.||++|.++|.|.+- ..+ ...+.+++.++++|+|+||++-+ ...+ . +.++++|.++
T Consensus 3 ~~G~~v~~~G~n~~w-------~~~-~~~~~~~~~~~~~G~n~VRi~v~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~ 74 (281)
T PF00150_consen 3 QNGKPVNWRGFNTHW-------YNP-SITEADFDQLKALGFNTVRIPVGWEAYQEPNPGYNYDETYLARLDRIVDAAQAY 74 (281)
T ss_dssp TTSEBEEEEEEEETT-------SGG-GSHHHHHHHHHHTTESEEEEEEESTSTSTTSTTTSBTHHHHHHHHHHHHHHHHT
T ss_pred CCCCeEEeeeeeccc-------CCC-CCHHHHHHHHHHCCCCEEEeCCCHHHhcCCCCCccccHHHHHHHHHHHHHHHhC
Confidence 589999999999971 111 36788999999999999998753 1111 1 6789999999
Q ss_pred CCEEEEecccc---cC---CCCCCHHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 255 GILIWQDMMFA---CN---NYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 255 GIlVw~e~~~~---~~---~~~~~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
||.|+.++.-. +. .+.......+.+.+-++.+..|+++||.|+.|.+.||...
T Consensus 75 gi~vild~h~~~~w~~~~~~~~~~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~ 133 (281)
T PF00150_consen 75 GIYVILDLHNAPGWANGGDGYGNNDTAQAWFKSFWRALAKRYKDNPPVVGWELWNEPNG 133 (281)
T ss_dssp T-EEEEEEEESTTCSSSTSTTTTHHHHHHHHHHHHHHHHHHHTTTTTTEEEESSSSGCS
T ss_pred CCeEEEEeccCccccccccccccchhhHHHHHhhhhhhccccCCCCcEEEEEecCCccc
Confidence 99999887432 11 1222333445555567889999999999999999999966
No 84
>PRK06781 amidophosphoribosyltransferase; Provisional
Probab=97.84 E-value=1.8e-05 Score=95.89 Aligned_cols=102 Identities=18% Similarity=0.181 Sum_probs=64.1
Q ss_pred CCCCCCCCcee-ccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeC-C
Q psy15568 1108 HPAKEKPPISV-VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTN-T 1185 (1231)
Q Consensus 1108 ~~~~~~~~~~~-~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~-t 1185 (1231)
+..+....+.+ ...++||+|+||||+|+||.|+.+++++|+++||++|.+.++=|-+-.+..==+.=+.-++++..+ |
T Consensus 331 R~~~v~~~f~~~~~~i~gk~VlLVDDvittGtTl~~~~~~Lk~aGA~eV~v~i~sPpi~~pc~yGid~~~~~elia~~~~ 410 (471)
T PRK06781 331 REQGVKMKLSAVRGVVEGKRVVMIDDSIVRGTTSKRIVRMLREAGATEVHVRIASPPLKYPCFYGIDIQTRKELIAANHT 410 (471)
T ss_pred HHHHHhcceeccccccCCceEEEEeceeccchHHHHHHHHHHHcCCcEEEEEECCCCccCCcccccCCCCHHHHHhcCCC
Confidence 33455566664 355899999999999999999999999999999999999986553322211000000111111111 2
Q ss_pred ccCCcccccCCCeEEEechHHHHH
Q psy15568 1186 IPHDVQKLQCPKIKTVDISILLSE 1209 (1231)
Q Consensus 1186 i~~~~~~~~~~~~~~~~~a~l~a~ 1209 (1231)
+..-.+....+-|..+|+..|+.-
T Consensus 411 ~eei~~~igadsl~yls~e~l~~a 434 (471)
T PRK06781 411 VEEIREMIGADSLTFLSEDGLVDA 434 (471)
T ss_pred HHHHHHHhCCCEEeccCHHHHHHH
Confidence 211112334567888888877644
No 85
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=97.83 E-value=5.1e-05 Score=80.58 Aligned_cols=61 Identities=21% Similarity=0.223 Sum_probs=46.5
Q ss_pred CCCceeccCC--CCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhh
Q psy15568 1113 KPPISVVGDV--GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIE 1173 (1231)
Q Consensus 1113 ~~~~~~~~~v--~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~ 1173 (1231)
.+.+.+..+. +|++|+||||+++||+|+.++.+.+.++|+.-+.+++.-..-..+-.+++.
T Consensus 103 ~~~l~~~~~~l~~G~rVlIVDDllaTGgT~~a~~~Ll~~~ga~vvg~~~~ie~~~~~gr~~l~ 165 (179)
T COG0503 103 SETLELHKDALKPGDRVLIVDDLLATGGTALALIELLEQAGAEVVGAAFVIELGELDGRKKLE 165 (179)
T ss_pred ceEEEEEhhhCCCCCEEEEEecchhcChHHHHHHHHHHHCCCEEEEEEEEEEcCccccchhhc
Confidence 3455555543 799999999999999999999999999999988888854443333334443
No 86
>PRK07631 amidophosphoribosyltransferase; Provisional
Probab=97.82 E-value=1.4e-05 Score=96.54 Aligned_cols=100 Identities=20% Similarity=0.213 Sum_probs=63.7
Q ss_pred CCCCCCcee-ccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeC-Ccc
Q psy15568 1110 AKEKPPISV-VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTN-TIP 1187 (1231)
Q Consensus 1110 ~~~~~~~~~-~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~-ti~ 1187 (1231)
.|....+.+ .+.++||+|+||||+|+||.|+.++++.|+++||++|.+.++=|-+-.+..==+.-+.-+++|..+ ++.
T Consensus 333 ~nv~~~f~~~~~~v~gk~VlLVDDsittGtTl~~~~~~L~~aGA~eV~v~~~sPpi~~pc~yGid~~~~~eLia~~~~~e 412 (475)
T PRK07631 333 QGVKMKLSPVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVRISSPPITHPCFYGIDTSTKEELIASNHSVE 412 (475)
T ss_pred HHHhhhhhhcccccCCceEEEEeeeeccHHHHHHHHHHHHHcCCCEEEEEEeCCCccCCcccCCCCCCHHHHhhcCCCHH
Confidence 344445554 456899999999999999999999999999999999999986553332221111111111222222 121
Q ss_pred CCcccccCCCeEEEechHHHHH
Q psy15568 1188 HDVQKLQCPKIKTVDISILLSE 1209 (1231)
Q Consensus 1188 ~~~~~~~~~~~~~~~~a~l~a~ 1209 (1231)
.-.+....+-|..+|+..|+.-
T Consensus 413 ei~~~igadsl~yls~e~l~~a 434 (475)
T PRK07631 413 EIRQLIGADSLAFLSQEGLLEG 434 (475)
T ss_pred HHHHHhCCCeEeccCHHHHHHH
Confidence 1112344567888998887544
No 87
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=97.82 E-value=2.5e-05 Score=84.67 Aligned_cols=42 Identities=17% Similarity=0.265 Sum_probs=39.6
Q ss_pred eccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1118 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1118 ~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
+-.+++||+|||||||+|||.||.++.+.|++.|+++|..|+
T Consensus 112 ~~~~i~gk~VLIVDDIvDTG~TL~~v~~~l~~~~p~svk~av 153 (211)
T PTZ00271 112 VRDSVENRHILIVEDIVDSAITLQYLMRFMLAKKPASLKTVV 153 (211)
T ss_pred CCCCCCCCEEEEEecccCCHHHHHHHHHHHHhcCCCEEEEEE
Confidence 345799999999999999999999999999999999999999
No 88
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=97.77 E-value=6.5e-05 Score=80.57 Aligned_cols=71 Identities=11% Similarity=0.164 Sum_probs=50.8
Q ss_pred CceeccC-C-CCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcC--CCCEEEEeCC
Q psy15568 1115 PISVVGD-V-GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEES--PIDEVVVTNT 1185 (1231)
Q Consensus 1115 ~~~~~~~-v-~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~--~~~~i~~t~t 1185 (1231)
.+.+-++ + +|++|+||||+++||+|+.++++.++++||+-+.++|.--.-..++.++|++. ++..++.-..
T Consensus 106 ~l~i~~~~l~~G~rVLIVDDvvtTGgT~~a~~~ll~~aGa~Vvgv~~lvd~~~~~g~~~l~~~gvpv~sL~~~~~ 180 (191)
T TIGR01744 106 TVAVSGEFLSDQDRVLIIDDFLANGQAAHGLVDIAKQAGAKIAGIGIVIEKSFQNGRQELVELGYRVESLARIQS 180 (191)
T ss_pred EEEEEHHhCCCcCEEEEEEehhccChHHHHHHHHHHHCCCEEEEEEEEEEecCccHHHHHHhcCCcEEEEEEEee
Confidence 3344453 3 89999999999999999999999999999997777774333223456777554 3445554433
No 89
>PRK13810 orotate phosphoribosyltransferase; Provisional
Probab=97.76 E-value=0.00018 Score=76.87 Aligned_cols=59 Identities=27% Similarity=0.383 Sum_probs=47.0
Q ss_pred ccC-CCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCC
Q psy15568 1119 VGD-VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPID 1178 (1231)
Q Consensus 1119 ~~~-v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~ 1178 (1231)
.|. .+|++|+||||+++||+|+.++++.|++.|+.-+.+++.--.- .++.++|++.++.
T Consensus 116 ~g~~~~g~rVlIVDDVitTGgS~~~~i~~l~~~Ga~V~~v~vlvdr~-~g~~~~l~~~gi~ 175 (187)
T PRK13810 116 VGDLKPEDRIVMLEDVTTSGGSVREAIEVVREAGAYIKYVITVVDRE-EGAEENLKEADVE 175 (187)
T ss_pred EccCCCcCEEEEEEeccCCChHHHHHHHHHHHCCCEEEEEEEEEECC-cChHHHHHHcCCc
Confidence 454 4899999999999999999999999999999877766644432 4667888766653
No 90
>PLN02440 amidophosphoribosyltransferase
Probab=97.76 E-value=5.2e-05 Score=92.45 Aligned_cols=42 Identities=17% Similarity=0.269 Sum_probs=39.6
Q ss_pred cCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEe
Q psy15568 1120 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 1161 (1231)
Q Consensus 1120 ~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th 1161 (1231)
..++||+|+||||+|+||.|+.++++.|+++||++|.+++.=
T Consensus 336 ~~v~gk~VlLVDDiittGtTl~~i~~~L~~aGa~~V~v~v~~ 377 (479)
T PLN02440 336 SVLEGKRVVVVDDSIVRGTTSSKIVRMLREAGAKEVHMRIAS 377 (479)
T ss_pred ccccCceEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEC
Confidence 568999999999999999999999999999999999999863
No 91
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=97.73 E-value=4.6e-05 Score=90.80 Aligned_cols=91 Identities=22% Similarity=0.256 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHcCCCEEEccC--CCCCCh----------HHHHHHHhHcCCEEEEeccccc------------------
Q psy15568 217 STIRDLLVSTKEANMNMLRVWG--GGVYMS----------DYFYETCDELGILIWQDMMFAC------------------ 266 (1231)
Q Consensus 217 ~~~~~~l~~~k~~g~N~iR~wg--gg~~~~----------~~fydlcDe~GIlVw~e~~~~~------------------ 266 (1231)
+.++++|++||++|+|+||++- ....|| |.++++|.+.||.|.--++.+.
T Consensus 10 e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~eG~ydF~~lD~~l~~a~~~Gi~viL~~~~~~~P~Wl~~~~Pe~~~~~~~ 89 (374)
T PF02449_consen 10 EEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEEGQYDFSWLDRVLDLAAKHGIKVILGTPTAAPPAWLYDKYPEILPVDAD 89 (374)
T ss_dssp CHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBTTB---HHHHHHHHHHHCTT-EEEEEECTTTS-HHHHCCSGCCC-B-TT
T ss_pred HHHHHHHHHHHHcCCCEEEEEEechhhccCCCCeeecHHHHHHHHHHHhccCeEEEEecccccccchhhhcccccccCCC
Confidence 8999999999999999999721 122344 7899999999999975542110
Q ss_pred ------C----CCCCCHHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 267 ------N----NYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 267 ------~----~~~~~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
. ..+++|.+.+.+++-++.+++|+++||.|++|.+.||...
T Consensus 90 g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~NE~~~ 140 (374)
T PF02449_consen 90 GRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQIDNEPGY 140 (374)
T ss_dssp TSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEECCSTTC
T ss_pred CCcCccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEeccccCc
Confidence 0 0134578889999999999999999999999999999855
No 92
>PLN03059 beta-galactosidase; Provisional
Probab=97.69 E-value=0.00034 Score=88.37 Aligned_cols=110 Identities=16% Similarity=0.212 Sum_probs=86.0
Q ss_pred EEECCeeEEEecceecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEE---ccCCCCCCh------------HHHHHHHhH
Q psy15568 189 FEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLR---VWGGGVYMS------------DYFYETCDE 253 (1231)
Q Consensus 189 f~lNG~pvflrG~n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR---~wggg~~~~------------~~fydlcDe 253 (1231)
|.|||+|+++-+...|.. |..+ +.|+..|+.+|++|+|+|= +|. .|-|. ..|+++|.|
T Consensus 37 f~idG~p~~i~sG~iHY~-----R~~p-~~W~d~L~k~Ka~GlNtV~tYV~Wn-~HEp~~G~~dF~G~~DL~~Fl~la~e 109 (840)
T PLN03059 37 FIINGQRRILISGSIHYP-----RSTP-EMWPDLIQKAKDGGLDVIQTYVFWN-GHEPSPGNYYFEDRYDLVKFIKVVQA 109 (840)
T ss_pred EEECCEEEEEEEeCcccC-----cCCH-HHHHHHHHHHHHcCCCeEEEEeccc-ccCCCCCeeeccchHHHHHHHHHHHH
Confidence 999999999999988754 7666 9999999999999999997 353 23222 599999999
Q ss_pred cCCEEEEec-------------ccccCCCC------CCHHHHHHHHHHHHHHHHHhCCCc-------eeEEeccccCC
Q psy15568 254 LGILIWQDM-------------MFACNNYP------ATPTFLQSVRSEISQTVRRVQHHP-------CIAVWAGNNEM 305 (1231)
Q Consensus 254 ~GIlVw~e~-------------~~~~~~~~------~~~~~~~~~~~e~~~~i~r~rnHP-------Sii~W~~~NE~ 305 (1231)
.||+|.--. |.|-...| +++.|++.+++.+.+.+.+++.+| .|||.-+-||-
T Consensus 110 ~GLyvilRpGPYIcAEw~~GGlP~WL~~~~~i~~Rs~d~~fl~~v~~~~~~l~~~l~~~~l~~~~GGPIImvQIENEY 187 (840)
T PLN03059 110 AGLYVHLRIGPYICAEWNFGGFPVWLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQIENEY 187 (840)
T ss_pred cCCEEEecCCcceeeeecCCCCchhhhcCCCcccccCCHHHHHHHHHHHHHHHHHHhhcceeecCCCcEEEEEecccc
Confidence 999997542 32211112 478999999998888888886555 58999999995
No 93
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism]
Probab=97.69 E-value=0.00019 Score=89.36 Aligned_cols=112 Identities=23% Similarity=0.366 Sum_probs=85.6
Q ss_pred EEECCeeEEEecceecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEEc----cCCCCCCh----------H-HHHHHHhH
Q psy15568 189 FEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRV----WGGGVYMS----------D-YFYETCDE 253 (1231)
Q Consensus 189 f~lNG~pvflrG~n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~----wggg~~~~----------~-~fydlcDe 253 (1231)
|.+-|+++++-|++++|. ++.+ +.+.++|+.||++|+|.+|+ | +..|| | .|++++..
T Consensus 8 ~~~dg~~~~l~gG~y~p~-----~~p~-~~w~ddl~~mk~~G~N~V~ig~faW--~~~eP~eG~fdf~~~D~~~l~~a~~ 79 (673)
T COG1874 8 FIRDGRRILLYGGDYYPE-----RWPR-ETWMDDLRKMKALGLNTVRIGYFAW--NLHEPEEGKFDFTWLDEIFLERAYK 79 (673)
T ss_pred eeeCCceeEEeccccChH-----HCCH-HHHHHHHHHHHHhCCCeeEeeeEEe--eccCccccccCcccchHHHHHHHHh
Confidence 889999999999999887 5554 89999999999999999999 5 33333 2 48999999
Q ss_pred cCCEEEEec-c-cccC-----C----------------------CCCCHHHHHHHHHHHHHHHHH-hCCCceeEEecccc
Q psy15568 254 LGILIWQDM-M-FACN-----N----------------------YPATPTFLQSVRSEISQTVRR-VQHHPCIAVWAGNN 303 (1231)
Q Consensus 254 ~GIlVw~e~-~-~~~~-----~----------------------~~~~~~~~~~~~~e~~~~i~r-~rnHPSii~W~~~N 303 (1231)
.||+|.--- | .+|. . .+..+-+.+.+..-++.+.+| +.|||+|++|-..|
T Consensus 80 ~Gl~vil~t~P~g~~P~Wl~~~~PeiL~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer~~~~~~~v~~w~~dn 159 (673)
T COG1874 80 AGLYVILRTGPTGAPPAWLAKKYPEILAVDENGRVRSDGARENICPVSPVYREYLDRILQQIRERLYGNGPAVITWQNDN 159 (673)
T ss_pred cCceEEEecCCCCCCchHHhcCChhheEecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHHHhccCCceeEEEccC
Confidence 999998655 4 2221 0 123344555555555567778 89999999999999
Q ss_pred CCccC
Q psy15568 304 EMEAH 308 (1231)
Q Consensus 304 E~~~h 308 (1231)
|-.+|
T Consensus 160 eY~~~ 164 (673)
T COG1874 160 EYGGH 164 (673)
T ss_pred ccCCc
Confidence 87664
No 94
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=97.64 E-value=0.0002 Score=79.53 Aligned_cols=51 Identities=16% Similarity=0.104 Sum_probs=41.3
Q ss_pred CCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhh
Q psy15568 1122 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIE 1173 (1231)
Q Consensus 1122 v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~ 1173 (1231)
.+|++|+||||+++||+|+..+++.++++||+.|.++|--..- ..+.+++.
T Consensus 174 ~~G~rVLIVDDvi~TG~Tl~~~~~ll~~~ga~vvgv~vlv~~~-~~~~~~l~ 224 (238)
T PRK08558 174 KKGDRVLIVDDIIRSGETQRALLDLARQAGADVVGVFFLIAVG-EVGIDRAR 224 (238)
T ss_pred CCcCEEEEEecccccCHHHHHHHHHHHHcCCEEEEEEEEEecC-chHHHHHh
Confidence 5899999999999999999999999999999988877733331 22355554
No 95
>PRK06031 phosphoribosyltransferase; Provisional
Probab=97.62 E-value=0.00011 Score=80.94 Aligned_cols=68 Identities=22% Similarity=0.144 Sum_probs=52.2
Q ss_pred CCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCC---CCEEEEeCCccCC
Q psy15568 1121 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP---IDEVVVTNTIPHD 1189 (1231)
Q Consensus 1121 ~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~---~~~i~~t~ti~~~ 1189 (1231)
.++||+|+||||+++||+|+.++++.|+++|++.+.+++.= .-.....++|.+.+ .+.++..-.+|.-
T Consensus 151 ~~~GkrVLIVDDVitTG~Tl~aa~~lL~~~Ga~Vvgv~v~v-~~g~~~~~~l~~~~~~~~~~~~~~~~~p~~ 221 (233)
T PRK06031 151 LLEGRRVALIDDVISSGASIVAGLRLLAACGIEPAGIGAAM-LQSERWRESLAAAGPQWPARVVGVFATPIL 221 (233)
T ss_pred cCCCCEEEEEEeEccccHHHHHHHHHHHHcCCeEEEEEEEE-EccccHHHHHHhcCCCcccceEEEeecccc
Confidence 47999999999999999999999999999999866555421 11245567777655 5777777777764
No 96
>TIGR01134 purF amidophosphoribosyltransferase. Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.
Probab=97.61 E-value=9.4e-05 Score=89.51 Aligned_cols=83 Identities=16% Similarity=0.167 Sum_probs=59.1
Q ss_pred ccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEE-----ec----CCCCChhhhhhcCCCCEEEEeCCccCC
Q psy15568 1119 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT-----HG----LLSSDAPLLIEESPIDEVVVTNTIPHD 1189 (1231)
Q Consensus 1119 ~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~t-----h~----~~~~~a~~~l~~~~~~~i~~t~ti~~~ 1189 (1231)
.+.++||+|+||||+|+||.|+.++++.|++.||++|.+++. || +...+-.|.+. +. .++..-
T Consensus 333 ~~~~~gk~v~lvDD~ittG~T~~~~~~~l~~~ga~~v~~~~~spp~~~pc~yg~d~~~~~el~~-~~-------~~~~~i 404 (442)
T TIGR01134 333 REVFRGKRVVLVDDSIVRGTTSRQIVKMLRDAGAKEVHVRIASPPIRYPCYYGIDMPTREELIA-NG-------RTVEEI 404 (442)
T ss_pred cccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEEccCCccCCcccccCCCCHHHHhh-cC-------CCHHHH
Confidence 356899999999999999999999999999999999999886 22 43333333332 11 122222
Q ss_pred cccccCCCeEEEechHHHHH
Q psy15568 1190 VQKLQCPKIKTVDISILLSE 1209 (1231)
Q Consensus 1190 ~~~~~~~~~~~~~~a~l~a~ 1209 (1231)
.+....+-+..+++..|+.-
T Consensus 405 ~~~~~~~~l~~~~~~~l~~~ 424 (442)
T TIGR01134 405 AKEIGADSLAYLSLEGLKEA 424 (442)
T ss_pred HHHhCCCEEEEecHHHHHHH
Confidence 22344677899999887544
No 97
>COG0461 PyrE Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=97.53 E-value=0.00023 Score=76.12 Aligned_cols=59 Identities=27% Similarity=0.375 Sum_probs=45.4
Q ss_pred ccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE--EecCCCCChhhhhhcCCCCEE
Q psy15568 1119 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA--THGLLSSDAPLLIEESPIDEV 1180 (1231)
Q Consensus 1119 ~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~--th~~~~~~a~~~l~~~~~~~i 1180 (1231)
.+.++|++|+||||++|||+++.+++++|+++|+..+.++| ... ..+.+.+++.++.-+
T Consensus 107 G~~~~G~kVvvVEDViTTG~Si~eai~~l~~~G~~V~gv~~ivDR~---~~~~~~~~~~g~~~~ 167 (201)
T COG0461 107 GGEVKGEKVVVVEDVITTGGSILEAVEALREAGAEVVGVAVIVDRQ---SGAKEVLKEYGVKLV 167 (201)
T ss_pred ecCCCCCEEEEEEecccCCHhHHHHHHHHHHcCCeEEEEEEEEecc---hhHHHHHHhcCCceE
Confidence 34568999999999999999999999999999999766665 333 344566666555443
No 98
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=97.50 E-value=0.00033 Score=78.46 Aligned_cols=71 Identities=10% Similarity=0.069 Sum_probs=51.1
Q ss_pred CCceeccC--CCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCcc
Q psy15568 1114 PPISVVGD--VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIP 1187 (1231)
Q Consensus 1114 ~~~~~~~~--v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~ 1187 (1231)
+.+.+..+ .+|++|+||||+++||+|+.++++.+++.||+-+.+++---. .+..+++. ..+-.++..+.+-
T Consensus 182 e~m~l~k~~l~~G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv~vlve~--~~~~~~l~-~~~~SL~~~~~~~ 254 (268)
T TIGR01743 182 QTMSLAKRSLKTGSKVLIIDDFMKAGGTINGMINLLDEFDAEVAGIGVLIDN--EGVDEKLV-DDYMSLLTLSNIN 254 (268)
T ss_pred eEEEEehhhCCCcCEEEEEeeecccCHHHHHHHHHHHHCCCEEEEEEEEEEC--CCChHHcC-CCceEEEEEeecc
Confidence 34555433 379999999999999999999999999999987777763222 23345553 3566666666654
No 99
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=97.49 E-value=0.0005 Score=79.87 Aligned_cols=112 Identities=19% Similarity=0.263 Sum_probs=78.7
Q ss_pred EEECCeeEEEecceecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEEccCC-CCCCh-------------HHHHHHHhHc
Q psy15568 189 FEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGG-GVYMS-------------DYFYETCDEL 254 (1231)
Q Consensus 189 f~lNG~pvflrG~n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~wgg-g~~~~-------------~~fydlcDe~ 254 (1231)
|.|||+|+++-++-.|.. |..+ +.++..|+.+|++|+|+|-+.-- .+-|+ +.|+++|.|.
T Consensus 2 ~~~~g~~~~~~~Ge~hy~-----r~p~-~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~g~~df~g~~dl~~f~~~a~~~ 75 (319)
T PF01301_consen 2 FLIDGKPFFILSGEFHYF-----RIPP-EYWRDRLQKMKAAGLNTVSTYVPWNLHEPEEGQFDFTGNRDLDRFLDLAQEN 75 (319)
T ss_dssp EEETTEEE-EEEEEE-GG-----GS-G-GGHHHHHHHHHHTT-SEEEEE--HHHHSSBTTB---SGGG-HHHHHHHHHHT
T ss_pred eEECCEEEEEEEeeeccc-----cCCh-hHHHHHHHHHHhCCcceEEEeccccccCCCCCcccccchhhHHHHHHHHHHc
Confidence 899999999999988875 6665 99999999999999999986310 01111 4999999999
Q ss_pred CCEEEEec-ccccCC------------------CCCCHHHHHHHHHHHHHHHHHhCCCc-----eeEEeccccCCc
Q psy15568 255 GILIWQDM-MFACNN------------------YPATPTFLQSVRSEISQTVRRVQHHP-----CIAVWAGNNEME 306 (1231)
Q Consensus 255 GIlVw~e~-~~~~~~------------------~~~~~~~~~~~~~e~~~~i~r~rnHP-----Sii~W~~~NE~~ 306 (1231)
||.|+--. |+.|+. -.+++.|++.+++-++.....++.|= .|||--+-||..
T Consensus 76 gl~vilrpGpyi~aE~~~gG~P~Wl~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~GGpII~vQvENEyg 151 (319)
T PF01301_consen 76 GLYVILRPGPYICAEWDNGGLPAWLLRKPDIRLRTNDPPFLEAVERWYRALAKIIKPLQYTNGGPIIMVQVENEYG 151 (319)
T ss_dssp T-EEEEEEES---TTBGGGG--GGGGGSTTS-SSSS-HHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEEESSSGG
T ss_pred CcEEEecccceecccccchhhhhhhhccccccccccchhHHHHHHHHHHHHHHHHHhhhhcCCCceehhhhhhhhC
Confidence 99998654 333321 12468899988888877777666532 488888999975
No 100
>KOG1712|consensus
Probab=97.47 E-value=0.00016 Score=72.60 Aligned_cols=62 Identities=21% Similarity=0.312 Sum_probs=52.7
Q ss_pred cCC-CCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEE
Q psy15568 1120 GDV-GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVV 1181 (1231)
Q Consensus 1120 ~~v-~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~ 1181 (1231)
|-+ .|.+|+||||++.||+|+.+|.+.|.+.||.-|.|+|.-.+-+-+..++|...++-.++
T Consensus 117 ~Ai~~g~rvvvVDDllATGGTl~AA~~Ll~r~ga~vvE~~~vieL~~LkGr~kL~~~pl~~Ll 179 (183)
T KOG1712|consen 117 GAIKPGQRVVVVDDLLATGGTLAAATELLERVGAEVVECACVIELPELKGREKLKGKPLFSLL 179 (183)
T ss_pred cccCCCCeEEEEechhhcCccHHHHHHHHHHhccEEEEEEEEEEccccCCccccCCCccEEEe
Confidence 444 68999999999999999999999999999999999998888776777888654555444
No 101
>PRK07349 amidophosphoribosyltransferase; Provisional
Probab=97.32 E-value=0.00015 Score=88.21 Aligned_cols=83 Identities=16% Similarity=0.224 Sum_probs=56.3
Q ss_pred ccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEE-----ecCCC----CChhhhhhcCCCCEEEEeCCccCC
Q psy15568 1119 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT-----HGLLS----SDAPLLIEESPIDEVVVTNTIPHD 1189 (1231)
Q Consensus 1119 ~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~t-----h~~~~----~~a~~~l~~~~~~~i~~t~ti~~~ 1189 (1231)
...++||+|+||||+|+||.|+.++++.|+++||++|.+.++ ||-|- ..-.+.+. +. -++..-
T Consensus 372 ~~~~~gkrVlLVDDvIttGtTl~~~~~~Lr~aGAkeV~~~i~sPp~~~pc~ygid~~~~~eLia-~~-------~~~eei 443 (500)
T PRK07349 372 KDVLAGKRIIIVDDSIVRGTTSRKIVKALRDAGATEVHMRISSPPVTHPCFYGIDTDTQDQLIA-AT-------KSVEEI 443 (500)
T ss_pred ccccCCCEEEEEeceeCCcHHHHHHHHHHHHhCCeEEEEEeCCCcccccccccCCCCCHHHHhh-cC-------CCHHHH
Confidence 455799999999999999999999999999999999998843 33222 22122221 11 122111
Q ss_pred cccccCCCeEEEechHHHHH
Q psy15568 1190 VQKLQCPKIKTVDISILLSE 1209 (1231)
Q Consensus 1190 ~~~~~~~~~~~~~~a~l~a~ 1209 (1231)
.+....+.|..+|+..|+.-
T Consensus 444 ~~~igadsl~yls~e~l~~a 463 (500)
T PRK07349 444 AEQIGVDSLAYLSWEGMLEA 463 (500)
T ss_pred HHHhCCCeEeccCHHHHHHH
Confidence 12344567889999887554
No 102
>PRK05500 bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Validated
Probab=97.29 E-value=0.00055 Score=82.79 Aligned_cols=58 Identities=19% Similarity=0.228 Sum_probs=43.6
Q ss_pred eccCC-CCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCC
Q psy15568 1118 VVGDV-GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP 1176 (1231)
Q Consensus 1118 ~~~~v-~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~ 1176 (1231)
+.|.+ +|++|+||||+++||+|+.++++.|++.|++.+.++|.--. ..++.++|++.+
T Consensus 386 ieG~~~~G~rVlIVDDViTTGgSi~eaie~l~~aG~~V~~v~vlVDR-~~g~~~~L~~~g 444 (477)
T PRK05500 386 IEGNFHPGETVVVVDDILITGKSVMEGAEKLKSAGLNVRDIVVFIDH-EQGVKDKLQSHG 444 (477)
T ss_pred EecCCCCcCEEEEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEEC-CcchHHHHHhcC
Confidence 34554 89999999999999999999999999999987666553222 124556665443
No 103
>KOG3367|consensus
Probab=97.27 E-value=0.00029 Score=71.29 Aligned_cols=39 Identities=18% Similarity=0.300 Sum_probs=37.5
Q ss_pred CCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1121 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1121 ~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
+++||+|+|||||++||.||......+++.+++.|.++.
T Consensus 122 ~ltgK~VliVeDIvdTGrTl~~Lls~~~~~k~~~v~vas 160 (216)
T KOG3367|consen 122 TLTGKNVLIVEDIVDTGRTLSTLLSHMKAYKPSMVKVAS 160 (216)
T ss_pred HhcCCcEEEEEeeccccchHHHHHHHHHhcCccceeeee
Confidence 479999999999999999999999999999999999987
No 104
>PRK09213 pur operon repressor; Provisional
Probab=97.20 E-value=0.00063 Score=76.46 Aligned_cols=62 Identities=11% Similarity=0.098 Sum_probs=46.4
Q ss_pred CCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCcc
Q psy15568 1123 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIP 1187 (1231)
Q Consensus 1123 ~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti~ 1187 (1231)
+|++|+||||+++||+|+.++++.+++.||.-+.+++-=-. .+..+++. ..+..++..+.+.
T Consensus 195 ~G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv~vlVd~--~~~~~~l~-~~~~SL~~~~~vd 256 (271)
T PRK09213 195 EGSRVLIVDDFMKAGGTINGMISLLKEFDAEVVGIGVLVET--KEPEERLV-DDYVSLLKLSEVD 256 (271)
T ss_pred CcCEEEEEeeecccCHhHHHHHHHHHHCCCEEEEEEEEEEC--CCChhhcC-CceEEEEEEehhc
Confidence 89999999999999999999999999999997777663222 22334543 3566666665553
No 105
>PRK06388 amidophosphoribosyltransferase; Provisional
Probab=97.12 E-value=0.00051 Score=83.39 Aligned_cols=82 Identities=13% Similarity=0.153 Sum_probs=56.3
Q ss_pred cCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCC---------CCChhhhhhcCCCCEEEEeCCccCCc
Q psy15568 1120 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLL---------SSDAPLLIEESPIDEVVVTNTIPHDV 1190 (1231)
Q Consensus 1120 ~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~---------~~~a~~~l~~~~~~~i~~t~ti~~~~ 1190 (1231)
+.++||+|+||||+++||.|+.+++++|+++||++|.+.++=|-+ ...-.+.+. +. -++..-.
T Consensus 352 ~~i~gk~VlLVDDsittGtTl~~~~~~L~~aGak~V~~ri~sPpi~~pc~yGid~~~~~eLia-~~-------~~~eei~ 423 (474)
T PRK06388 352 EVISGKRIVLVDDSIVRGNTMRFIVKIMRKYGAKEVHVRIGSPHIIAPCYFGVDMKTKDQFIA-RG-------KTDEEIN 423 (474)
T ss_pred ccccCceEEEEeCeECcHHHHHHHHHHHHHcCCCEEEEEeCCCCccCCcccCCCCCCHHHHHh-cC-------CCHHHHH
Confidence 457999999999999999999999999999999999988765422 222222222 11 1221111
Q ss_pred ccccCCCeEEEechHHHHH
Q psy15568 1191 QKLQCPKIKTVDISILLSE 1209 (1231)
Q Consensus 1191 ~~~~~~~~~~~~~a~l~a~ 1209 (1231)
+....+.|..+|+..|+.-
T Consensus 424 ~~igadsl~yls~~~l~~a 442 (474)
T PRK06388 424 NEIGADSLAFLSIDGLKQA 442 (474)
T ss_pred HHhCCCeeeccCHHHHHHH
Confidence 2334567888888777644
No 106
>PRK07847 amidophosphoribosyltransferase; Provisional
Probab=97.05 E-value=0.00041 Score=84.75 Aligned_cols=83 Identities=12% Similarity=0.175 Sum_probs=57.2
Q ss_pred CCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCCh--------hhhhhcCCCCEEEEeCCccCCccc
Q psy15568 1121 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDA--------PLLIEESPIDEVVVTNTIPHDVQK 1192 (1231)
Q Consensus 1121 ~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a--------~~~l~~~~~~~i~~t~ti~~~~~~ 1192 (1231)
.++||+||||||+|+||.|+.++++.|+++||++|.+.++=|-+-.+. .+.|..+.. |+..-.+.
T Consensus 364 ~~~gk~vllVDD~ittG~T~~~~~~~L~~~ga~~v~~ri~sPpi~~pc~yGid~~~~~eLia~~~-------~~eei~~~ 436 (510)
T PRK07847 364 VIRGKRLVVVDDSIVRGNTQRALVRMLREAGAAEVHVRISSPPVKWPCFYGIDFASRAELIANGL-------TVEEIRRS 436 (510)
T ss_pred ccCCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEEECCCCcCCCCcCcCCCCCHHHHHhcCC-------CHHHHHHH
Confidence 479999999999999999999999999999999999887655322221 122211211 22211123
Q ss_pred ccCCCeEEEechHHHHHH
Q psy15568 1193 LQCPKIKTVDISILLSEA 1210 (1231)
Q Consensus 1193 ~~~~~~~~~~~a~l~a~~ 1210 (1231)
...+.|..+|+..|+.-.
T Consensus 437 igadsl~yls~e~l~~a~ 454 (510)
T PRK07847 437 IGADSLGYISLDGMIAAT 454 (510)
T ss_pred hCCCeEeccCHHHHHHHh
Confidence 456778899998876543
No 107
>COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism]
Probab=96.92 E-value=0.001 Score=77.62 Aligned_cols=88 Identities=22% Similarity=0.329 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHcCCCEEEcc---CCC-------C-----CC-hHHHHHHHhHcCCEEEEec--------------cccc
Q psy15568 217 STIRDLLVSTKEANMNMLRVW---GGG-------V-----YM-SDYFYETCDELGILIWQDM--------------MFAC 266 (1231)
Q Consensus 217 ~~~~~~l~~~k~~g~N~iR~w---ggg-------~-----~~-~~~fydlcDe~GIlVw~e~--------------~~~~ 266 (1231)
+.++++++.++.+|++.+|+| |-. . .. -+.|++.|-+++|-|..-+ |++.
T Consensus 26 ~ei~~dle~a~~vg~k~lR~fiLDgEdc~d~~G~~na~s~~~y~~~fla~a~~l~lkvlitlivg~~hmgg~Nw~Ipwag 105 (587)
T COG3934 26 REIKADLEPAGFVGVKDLRLFILDGEDCRDKEGYRNAGSNVWYAAWFLAPAGYLDLKVLITLIVGLKHMGGTNWRIPWAG 105 (587)
T ss_pred hhhhcccccccCccceeEEEEEecCcchhhhhceecccccHHHHHHHhhhcccCcceEEEEEeecccccCcceeEeecCC
Confidence 788899999999999999998 211 0 00 1689999999999885432 3333
Q ss_pred CCCC----CCHHHHHHHHHHHHHHHHHhCCCceeEEeccccC
Q psy15568 267 NNYP----ATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNE 304 (1231)
Q Consensus 267 ~~~~----~~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE 304 (1231)
...| .|+.+....++-+++.|+.++-||.|..|.+.||
T Consensus 106 ~~~pdn~iyD~k~~~~~kkyvedlVk~yk~~ptI~gw~l~Ne 147 (587)
T COG3934 106 EQSPDNVIYDPKFRGPGKKYVEDLVKPYKLDPTIAGWALRNE 147 (587)
T ss_pred CCCccccccchhhcccHHHHHHHHhhhhccChHHHHHHhcCC
Confidence 3334 3577888889999999999999999999999999
No 108
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=96.75 E-value=0.0076 Score=63.33 Aligned_cols=92 Identities=16% Similarity=0.299 Sum_probs=65.6
Q ss_pred hHHHHHHHHHHHHcCCCEE-----EccCCCCCCh---------------HHHHHHHhHcCCEEEEecccccCCCC-CCHH
Q psy15568 216 ESTIRDLLVSTKEANMNML-----RVWGGGVYMS---------------DYFYETCDELGILIWQDMMFACNNYP-ATPT 274 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~i-----R~wggg~~~~---------------~~fydlcDe~GIlVw~e~~~~~~~~~-~~~~ 274 (1231)
+++++++++.||+.|||.| +..+..-||. +.++++||++||-|+..+.+...-+. .+.+
T Consensus 19 ~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~Gl~~~~~~w~~~~~~ 98 (166)
T PF14488_consen 19 PAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVGLYFDPDYWDQGDLD 98 (166)
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEeCCCCchhhhccCHH
Confidence 4999999999999999998 2222222232 47999999999999999876432222 2333
Q ss_pred HHH-HHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 275 FLQ-SVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 275 ~~~-~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
+.. ..+.-+.+...++.+|||+..|=+..|...
T Consensus 99 ~~~~~~~~v~~el~~~yg~h~sf~GWYip~E~~~ 132 (166)
T PF14488_consen 99 WEAERNKQVADELWQRYGHHPSFYGWYIPYEIDD 132 (166)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCceEEEecccCC
Confidence 322 223344566678999999999999999965
No 109
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=96.60 E-value=0.0021 Score=66.83 Aligned_cols=29 Identities=28% Similarity=0.329 Sum_probs=26.7
Q ss_pred CCCCCEEEEEecccCcHHHHHHHHHHHHh
Q psy15568 1121 DVGGRVAIMVDDMVDDVHSFVAAAEVLKD 1149 (1231)
Q Consensus 1121 ~v~gk~~iivDDii~tG~T~~~~~~~l~~ 1149 (1231)
..+||+|+||||++|||.||.++.+.|++
T Consensus 81 ~~~gk~VLIVDDIiDTG~Tl~~v~~~l~~ 109 (156)
T PRK09177 81 EGDGEGFLVVDDLVDTGGTARAVREMYPK 109 (156)
T ss_pred CcCcCEEEEEeeeeCCHHHHHHHHHHHhh
Confidence 36999999999999999999999999874
No 110
>PLN02541 uracil phosphoribosyltransferase
Probab=96.59 E-value=0.0022 Score=71.14 Aligned_cols=54 Identities=28% Similarity=0.345 Sum_probs=45.7
Q ss_pred cCCC-CCEEEEEecccCcHHHHHHHHHHHHhcCCC--eEEEEEEecCCCCChhhhhhcC
Q psy15568 1120 GDVG-GRVAIMVDDMVDDVHSFVAAAEVLKDRGAY--KIYVLATHGLLSSDAPLLIEES 1175 (1231)
Q Consensus 1120 ~~v~-gk~~iivDDii~tG~T~~~~~~~l~~~ga~--~v~~~~th~~~~~~a~~~l~~~ 1175 (1231)
.++. +++|||+|||++||+|++.+++.|+++|++ +|.+++ -+.+...++++.+.
T Consensus 152 ~~i~~~~~VlllDpmLATGgS~~~ai~~L~~~Gv~~~~I~~v~--~ias~~Gl~~i~~~ 208 (244)
T PLN02541 152 DKFPEGSRVLVVDPMLATGGTIVAAIDELVSRGASVEQIRVVC--AVAAPPALKKLSEK 208 (244)
T ss_pred hhcCCCCEEEEECcchhhhHHHHHHHHHHHHcCCCcccEEEEE--EEECHHHHHHHHHH
Confidence 3454 679999999999999999999999999998 777776 56678888888664
No 111
>COG0035 Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=96.46 E-value=0.0035 Score=67.09 Aligned_cols=67 Identities=27% Similarity=0.356 Sum_probs=55.3
Q ss_pred eccCCCCCEEEEEecccCcHHHHHHHHHHHHhc-CCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCc
Q psy15568 1118 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDR-GAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTI 1186 (1231)
Q Consensus 1118 ~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~-ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti 1186 (1231)
+-.+.++|+|||+|=|++||+|++.|++.|+++ |+++|.++| -+.+...++++.++.=+--+.|=.|
T Consensus 118 LP~~~~~~~viv~DPMLATG~s~i~ai~~L~~~G~~~~I~~v~--~vAapeGi~~v~~~~p~v~I~ta~i 185 (210)
T COG0035 118 LPEDIDERTVIVLDPMLATGGSAIAAIDLLKKRGGPKNIKVVS--LVAAPEGIKAVEKAHPDVEIYTAAI 185 (210)
T ss_pred CCCcccCCeEEEECchhhccHhHHHHHHHHHHhCCCceEEEEE--EEecHHHHHHHHHhCCCCeEEEEEe
Confidence 334799999999999999999999999999999 999999888 6677888999987544444455444
No 112
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=96.38 E-value=0.002 Score=68.64 Aligned_cols=37 Identities=27% Similarity=0.401 Sum_probs=32.4
Q ss_pred CCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEE
Q psy15568 1122 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 1158 (1231)
Q Consensus 1122 v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~ 1158 (1231)
++||+|+|||||.|||.||..|.+.|++..+..+..+
T Consensus 85 l~GkkVLIVDDI~DTG~Tl~~a~~~l~~~~p~e~rta 121 (192)
T COG2236 85 LSGKKVLIVDDIVDTGETLELALEELKKLAPAEVRTA 121 (192)
T ss_pred cCCCeEEEEecccCchHhHHHHHHHHHhhCchhhhhh
Confidence 8999999999999999999999999999666555433
No 113
>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B ....
Probab=96.31 E-value=0.00012 Score=72.17 Aligned_cols=53 Identities=23% Similarity=0.387 Sum_probs=43.1
Q ss_pred CCeEEEEEEeCCCC--CccceEEEEEEEEecCCccceecccceEEeeecccccccchHHHHHHHHhhccC
Q psy15568 526 SRTLEVVLLNDPNR--PLHNVTIVTESYAWNDTRPFRSVKTPLVTVVSGKMRKRGCIVSKLLAKMMCTSG 593 (1231)
Q Consensus 526 ~~~leV~vvNDa~~--~~~~~~v~v~~~~~~~~~~~~~~~~~~~~i~~~k~~~~e~i~ak~va~ll~~~g 593 (1231)
+..++++++.|+++ ..+++++++||++|++|++ + .+||++++|++|+||+++|
T Consensus 62 d~lmeLll~i~a~r~~~a~~i~~ViPYl~YaRQDr--------------~-~~ge~isak~~a~lL~~~G 116 (116)
T PF13793_consen 62 DNLMELLLLIDALRRAGAKRITLVIPYLPYARQDR--------------R-KPGEPISAKVVAKLLSAAG 116 (116)
T ss_dssp HHHHHHHHHHHHHHHTTBSEEEEEESS-TTTTSSS--------------S-STTC--HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeccchhhhhhcc--------------C-CCCCcchHHHHHHHHHhcC
Confidence 45678888888776 4468999999999999988 6 8899999999999999887
No 114
>COG2065 PyrR Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=96.21 E-value=0.018 Score=58.75 Aligned_cols=43 Identities=30% Similarity=0.370 Sum_probs=37.5
Q ss_pred eeccCCCCCEEEEEecccCcHHHHHHHHHHHHhcC-CCeEEEEE
Q psy15568 1117 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRG-AYKIYVLA 1159 (1231)
Q Consensus 1117 ~~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~g-a~~v~~~~ 1159 (1231)
.+-.++.||+||||||++-||.|+.+|.++|...| +.+|..+|
T Consensus 89 ~~~~di~~k~VILVDDVLytGRTIRAAldal~d~GRPa~I~Lav 132 (179)
T COG2065 89 ILPFDITGKRVILVDDVLYTGRTIRAALDALVDYGRPAKIQLAV 132 (179)
T ss_pred cCcccccCCEEEEEeeecccCccHHHHHHHHHhcCCcceEEEEE
Confidence 45678999999999999999999999999999998 45666666
No 115
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=95.98 E-value=0.0032 Score=73.90 Aligned_cols=90 Identities=16% Similarity=0.196 Sum_probs=56.5
Q ss_pred ccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCCCChhhhhhcCCCCEEEEeC-CccCCcccccCCC
Q psy15568 1119 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTN-TIPHDVQKLQCPK 1197 (1231)
Q Consensus 1119 ~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~-ti~~~~~~~~~~~ 1197 (1231)
-..++||.|+||||=|=.|.|+.+.++.|+++||++|.+...=|-.-.+..==+.=..-+++|..+ ++..-.+....+.
T Consensus 343 r~~v~GKrVvlVDDSIVRGTTsr~IV~mlReAGAkEVHvriasP~i~~Pc~YGID~pt~~eLIA~~~~~eeI~~~IgaDS 422 (470)
T COG0034 343 REVVKGKRVVLVDDSIVRGTTSRRIVQMLREAGAKEVHVRIASPPIRYPCFYGIDMPTREELIAANRTVEEIRKAIGADS 422 (470)
T ss_pred HHHhCCCeEEEEccccccCccHHHHHHHHHHhCCCEEEEEecCCCccCCCccccCCCCHHHHhhCCCCHHHHHHHhCCCc
Confidence 356899999999999999999999999999999999998864332221111000001111222222 2211112334566
Q ss_pred eEEEechHHHH
Q psy15568 1198 IKTVDISILLS 1208 (1231)
Q Consensus 1198 ~~~~~~a~l~a 1208 (1231)
|..+|+..|+.
T Consensus 423 L~yLslegL~~ 433 (470)
T COG0034 423 LAYLSLEGLIK 433 (470)
T ss_pred eeeecHHHHHH
Confidence 78888887753
No 116
>PRK10150 beta-D-glucuronidase; Provisional
Probab=95.80 E-value=0.011 Score=74.90 Aligned_cols=54 Identities=17% Similarity=0.226 Sum_probs=39.3
Q ss_pred hhhHHHHHHHhcC--cEEEEeCCCCCCcccccccccccccccCchhhHHhHHHHHHHhHHHHHHhhCCCCCcccC
Q psy15568 721 AKKATSYAERLRL--GIAVIHGEQKESESDEYEVDLTRYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTS 793 (1231)
Q Consensus 721 ~~Ea~~~v~Rlr~--SialW~G~NE~~~~~~~~~~~~~~~~~~~~~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~S 793 (1231)
.+++++.|+|.|| ||++||-+||..... +...-|.+.+.+.++++||+||+...
T Consensus 393 ~~~~~~mv~r~~NHPSIi~Ws~gNE~~~~~-------------------~~~~~~~~~l~~~~k~~DptR~vt~~ 448 (604)
T PRK10150 393 LQAIRELIARDKNHPSVVMWSIANEPASRE-------------------QGAREYFAPLAELTRKLDPTRPVTCV 448 (604)
T ss_pred HHHHHHHHHhccCCceEEEEeeccCCCccc-------------------hhHHHHHHHHHHHHHhhCCCCceEEE
Confidence 4557889999996 999999999964211 11122445667889999999998654
No 117
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C ....
Probab=95.52 E-value=0.011 Score=64.44 Aligned_cols=67 Identities=25% Similarity=0.320 Sum_probs=50.1
Q ss_pred eccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCC--CeEEEEEEecCCCCChhhhhhcCCCCEEEEeCCc
Q psy15568 1118 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGA--YKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTI 1186 (1231)
Q Consensus 1118 ~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga--~~v~~~~th~~~~~~a~~~l~~~~~~~i~~t~ti 1186 (1231)
+-.++++++|||+|-|++||+|++.+++.|+++|+ ++|.+++ -+.+..+++++.+..=+--|+|-.|
T Consensus 115 LP~~i~~~~VillDpmlaTG~s~~~ai~~L~~~G~~~~~I~~v~--~ias~~Gl~~l~~~~P~v~I~ta~i 183 (207)
T PF14681_consen 115 LPEDIENRKVILLDPMLATGGSAIAAIEILKEHGVPEENIIIVS--VIASPEGLERLLKAFPDVRIYTAAI 183 (207)
T ss_dssp --TTGTTSEEEEEESEESSSHHHHHHHHHHHHTTG-GGEEEEEE--EEEEHHHHHHHHHHSTTSEEEEEEE
T ss_pred CCCCccCCEEEEEeccccchhhHHHHHHHHHHcCCCcceEEEEE--EEecHHHHHHHHHhCCCeEEEEEEE
Confidence 44578999999999999999999999999999987 6787777 4455778888865322333444444
No 118
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
Probab=95.45 E-value=0.043 Score=64.01 Aligned_cols=62 Identities=15% Similarity=0.061 Sum_probs=47.8
Q ss_pred HHhHHHHHHHHHHHHHHHHhcccccccCCCccceeeeeehhcCc--cCCC---Cc-ceeecCCCcchhHHHHHHh
Q psy15568 444 QLNDIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDV--WQAP---TW-SSIDYDGNWKMLHYFARKF 512 (1231)
Q Consensus 444 ~~sQ~~Qa~~~k~~~E~~rr~~~~~~~~~~~~~~G~l~WqlnD~--wP~~---~W-~~iDy~~~pK~~~y~~k~~ 512 (1231)
...+..||+.++..++.+.+... ..|.|+..|-+.|- |-.. .. .++|-.++|||+|++++++
T Consensus 252 ~~~~~~qA~~~~~~~~~~~~~~~-------~~v~git~Wg~~D~~sW~~~~~~~~~~lfd~~~~~Kpa~~~~~~a 319 (320)
T PF00331_consen 252 AEEEEAQAEYYRDFLTACFSHPP-------AAVEGITWWGFTDGYSWRPDTPPDRPLLFDEDYQPKPAYDAIVDA 319 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTH-------CTEEEEEESSSBTTGSTTGGHSEG--SSB-TTSBB-HHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhCCc-------cCCCEEEEECCCCCCcccCCCCCCCCeeECCCcCCCHHHHHHHhc
Confidence 45678999999999999998752 15999999999995 3222 11 6899999999999999876
No 119
>PRK13812 orotate phosphoribosyltransferase; Provisional
Probab=94.97 E-value=0.12 Score=54.99 Aligned_cols=86 Identities=9% Similarity=0.101 Sum_probs=54.2
Q ss_pred HHHHHHhhccCcceEEEEecccccccccc-Ccccc--cccCchhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhC
Q psy15568 583 KLLAKMMCTSGLKHIITMDLHQKEIQGFF-DCPVD--NLRASPFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLR 659 (1231)
Q Consensus 583 k~va~ll~~~g~d~vitvDlHs~~~~~~F-~~p~~--~l~a~~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~ 659 (1231)
+.+.+.|...|+=..=-+.+-|.+...|| +...- +=.....+++++.+.+. ++.+|++|+.|+..+|..+|..|+
T Consensus 4 ~~l~~~l~~~~a~~~g~f~l~SG~~S~~yid~~~~~~~p~~~~~i~~~l~~~i~--~~d~ivg~~~ggi~lA~~lA~~l~ 81 (176)
T PRK13812 4 DDLIAALRDADAVQFGEFELSHGGTSEYYVDKYLFETDPDCLRLIAEAFADRID--EDTKLAGVALGAVPLVAVTSVETG 81 (176)
T ss_pred HHHHHHHHHCCCEEeCCEEECcCCcCCEEEeCeeccCCHHHHHHHHHHHHHHhc--cCCEEEEeecchHHHHHHHHHHHC
Confidence 34455555556522212444555554443 32211 11123456677766432 237999999999999999999999
Q ss_pred CcEEEEecccc
Q psy15568 660 LGIAVIHGEQK 670 (1231)
Q Consensus 660 ~~~~~~~k~r~ 670 (1231)
+|+++..|++.
T Consensus 82 ~p~~~~rk~~k 92 (176)
T PRK13812 82 VPYVIARKQAK 92 (176)
T ss_pred CCEEEEeccCC
Confidence 99999988764
No 120
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=94.64 E-value=0.026 Score=65.22 Aligned_cols=51 Identities=24% Similarity=0.320 Sum_probs=38.9
Q ss_pred hhhHHHHHHHhcC--cEEEEeCCCCCCcccccccccccccccCchhhHHhHHHHHHHhHHHHHHhhCCCCCcccCCC
Q psy15568 721 AKKATSYAERLRL--GIAVIHGEQKESESDEYEVDLTRYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSP 795 (1231)
Q Consensus 721 ~~Ea~~~v~Rlr~--SialW~G~NE~~~~~~~~~~~~~~~~~~~~~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~SSP 795 (1231)
.+++++.|+|+|| ||++||-+||.. +. -+.+.|.++++++||+||....|.
T Consensus 107 ~~~~~~~v~~~~NHPSIi~W~~gNE~~-----------------------~~-~~~~~l~~~~k~~DptRpv~~~~~ 159 (298)
T PF02836_consen 107 EQELREMVRRDRNHPSIIMWSLGNESD-----------------------YR-EFLKELYDLVKKLDPTRPVTYASN 159 (298)
T ss_dssp HHHHHHHHHHHTT-TTEEEEEEEESSH-----------------------HH-HHHHHHHHHHHHH-TTSEEEEETG
T ss_pred HHHHHHHHHcCcCcCchheeecCccCc-----------------------cc-cchhHHHHHHHhcCCCCceeeccc
Confidence 4678899999995 999999999972 11 234567789999999999865554
No 121
>KOG0572|consensus
Probab=93.87 E-value=0.042 Score=62.83 Aligned_cols=43 Identities=16% Similarity=0.311 Sum_probs=39.7
Q ss_pred eccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEE
Q psy15568 1118 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 1160 (1231)
Q Consensus 1118 ~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~t 1160 (1231)
+-.+++||+++||||-|--|.|+...++.|+++||++|+....
T Consensus 350 l~~~~~GKrvvlVDDSIVRGtTs~~IVkmlreaGAkeVh~riA 392 (474)
T KOG0572|consen 350 LRQNFEGKRVVLVDDSIVRGTTSSPIVKMLREAGAKEVHIRIA 392 (474)
T ss_pred chhhcCCceEEEEecceeccCchHHHHHHHHHcCCcEEEEEec
Confidence 4567999999999999999999999999999999999988763
No 122
>PRK13809 orotate phosphoribosyltransferase; Provisional
Probab=93.77 E-value=0.33 Score=52.91 Aligned_cols=84 Identities=18% Similarity=0.132 Sum_probs=53.1
Q ss_pred HHHHHhhccCcceEEEEeccccccccc-cCcccccccCchhH----HHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhh
Q psy15568 584 LLAKMMCTSGLKHIITMDLHQKEIQGF-FDCPVDNLRASPFL----LQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERL 658 (1231)
Q Consensus 584 ~va~ll~~~g~d~vitvDlHs~~~~~~-F~~p~~~l~a~~~l----~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L 658 (1231)
++..+++ .|+=++=.+.|-|.....+ +++. .+...|.. ++.+.+.+...+..+|++|+.++..+|..+|..+
T Consensus 13 l~~~l~~-~gal~~g~F~L~SG~~S~~y~D~~--~i~~~p~~l~~i~~~l~~~~~~~~~d~IvG~~~~Gi~~A~~vA~~l 89 (206)
T PRK13809 13 AVAILYQ-IGAIKFGKFILASGEETPIYVDMR--LVISSPEVLQTIATLIWRLRPSFNSSLLCGVPYTALTLATSISLKY 89 (206)
T ss_pred HHHHHHH-cCCEEECCEEECCcCCCCEEEECh--hhccCHHHHHHHHHHHHHHhccCCCCEEEEecCccHHHHHHHHHHh
Confidence 4444444 4553332345556555444 4432 33334433 3444443334466799999999999999999999
Q ss_pred CCcEEEEecccc
Q psy15568 659 RLGIAVIHGEQK 670 (1231)
Q Consensus 659 ~~~~~~~~k~r~ 670 (1231)
++|+.+..|++.
T Consensus 90 ~~p~~~~RK~~K 101 (206)
T PRK13809 90 NIPMVLRRKELK 101 (206)
T ss_pred CCCEEEEeCCCC
Confidence 999999888764
No 123
>PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D.
Probab=93.50 E-value=0.11 Score=59.65 Aligned_cols=110 Identities=18% Similarity=0.168 Sum_probs=65.5
Q ss_pred EECCeeEEEecceecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEEccCCCC------------C--------------C
Q psy15568 190 EVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGV------------Y--------------M 243 (1231)
Q Consensus 190 ~lNG~pvflrG~n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~wggg~------------~--------------~ 243 (1231)
+-+|+|+|.-|.... .+..+.+. +..+..|+..|+.|||.||+..-.. . +
T Consensus 7 ~~dG~Pff~lgdT~W---~~~~~~~~-~e~~~yL~~r~~qgFN~iq~~~l~~~~~~~~~n~~~~~~~~~~~~~~~d~~~~ 82 (289)
T PF13204_consen 7 YADGTPFFWLGDTAW---SLFHRLTR-EEWEQYLDTRKEQGFNVIQMNVLPQWDGYNTPNRYGFAPFPDEDPGQFDFTRP 82 (289)
T ss_dssp ETTS-B--EEEEE-T---THHHH--H-HHHHHHHHHHHHTT--EEEEES-SSSS-B----TTS-BS-SSTT------TT-
T ss_pred cCCCCEEeehhHHHH---HHhhCCCH-HHHHHHHHHHHHCCCCEEEEEeCCCcccccccccCCCcCCCCCCccccCCCCC
Confidence 489999999996432 22234443 7888899999999999999753111 0 1
Q ss_pred h-------HHHHHHHhHcCCEEEEecccc-cC----CCCC--CHHHHHHHHHHHHHHHHHhCCCceeEEeccccCC
Q psy15568 244 S-------DYFYETCDELGILIWQDMMFA-CN----NYPA--TPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEM 305 (1231)
Q Consensus 244 ~-------~~fydlcDe~GIlVw~e~~~~-~~----~~~~--~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~ 305 (1231)
. |.-.+.+.++||.+-- .+++ +. .+.. ..--.++.+.-++.+++|++.-|-|+ |+++||.
T Consensus 83 N~~YF~~~d~~i~~a~~~Gi~~~l-v~~wg~~~~~~~Wg~~~~~m~~e~~~~Y~~yv~~Ry~~~~Nvi-W~l~gd~ 156 (289)
T PF13204_consen 83 NPAYFDHLDRRIEKANELGIEAAL-VPFWGCPYVPGTWGFGPNIMPPENAERYGRYVVARYGAYPNVI-WILGGDY 156 (289)
T ss_dssp ---HHHHHHHHHHHHHHTT-EEEE-ESS-HHHHH-------TTSS-HHHHHHHHHHHHHHHTT-SSEE-EEEESSS
T ss_pred CHHHHHHHHHHHHHHHHCCCeEEE-EEEECCccccccccccccCCCHHHHHHHHHHHHHHHhcCCCCE-EEecCcc
Confidence 1 2345677889999842 2333 21 1111 11125678888999999999999887 9999998
No 124
>PF15609 PRTase_2: Phosphoribosyl transferase
Probab=93.38 E-value=0.11 Score=55.10 Aligned_cols=42 Identities=24% Similarity=0.309 Sum_probs=35.2
Q ss_pred CCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecCCC
Q psy15568 1124 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLS 1165 (1231)
Q Consensus 1124 gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~~ 1165 (1231)
.+.+|+|||-|+||.|++.++++|++.-+.+=++++|--=+.
T Consensus 121 ~~~lVLVDDEiSTG~T~lnli~al~~~~p~~~yvvasL~d~~ 162 (191)
T PF15609_consen 121 ARTLVLVDDEISTGNTFLNLIRALHAKYPRKRYVVASLLDWR 162 (191)
T ss_pred CCCEEEEecCccchHHHHHHHHHHHHhCCCceEEEEEEeeCC
Confidence 679999999999999999999999998877766666544443
No 125
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed
Probab=93.27 E-value=0.071 Score=71.39 Aligned_cols=48 Identities=8% Similarity=-0.043 Sum_probs=37.5
Q ss_pred hhhHHHHHHHhcC--cEEEEeCCCCCCcccccccccccccccCchhhHHhHHHHHHHhHHHHHHhhCCCCCccc
Q psy15568 721 AKKATSYAERLRL--GIAVIHGEQKESESDEYEVDLTRYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLT 792 (1231)
Q Consensus 721 ~~Ea~~~v~Rlr~--SialW~G~NE~~~~~~~~~~~~~~~~~~~~~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~ 792 (1231)
.++++.+|+|.|| ||++||++||... + . ....+.+.++++||+||+..
T Consensus 425 ~~~~~~mV~RdrNHPSIi~WslGNE~~~-----g------------------~-~~~~~~~~~k~~DptR~v~~ 474 (1021)
T PRK10340 425 VDRIVRHIHAQKNHPSIIIWSLGNESGY-----G------------------C-NIRAMYHAAKALDDTRLVHY 474 (1021)
T ss_pred HHHHHHHHHhCCCCCEEEEEECccCccc-----c------------------H-HHHHHHHHHHHhCCCceEEe
Confidence 4678999999996 9999999999741 1 0 11345688999999999864
No 126
>smart00633 Glyco_10 Glycosyl hydrolase family 10.
Probab=93.20 E-value=0.19 Score=56.76 Aligned_cols=52 Identities=15% Similarity=0.114 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHhcccccccCCCccceeeeeehhcCc--cCCC-CcceeecCCCcchhHHH
Q psy15568 448 IYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDV--WQAP-TWSSIDYDGNWKMLHYF 508 (1231)
Q Consensus 448 ~~Qa~~~k~~~E~~rr~~~~~~~~~~~~~~G~l~WqlnD~--wP~~-~W~~iDy~~~pK~~~y~ 508 (1231)
..||+.++..++.+.... .|.|+.+|-+.|- |-.- .=+++|..++|||+|++
T Consensus 199 ~~qA~~~~~~l~~~~~~p---------~v~gi~~Wg~~d~~~W~~~~~~~L~d~~~~~kpa~~~ 253 (254)
T smart00633 199 QAQAADYEEVFKACLAHP---------AVTGVTVWGVTDKYSWLDGGAPLLFDANYQPKPAYWA 253 (254)
T ss_pred HHHHHHHHHHHHHHHcCC---------CeeEEEEeCCccCCcccCCCCceeECCCCCCChhhhc
Confidence 689999999999988753 4899999998874 3221 12699999999999975
No 127
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=92.38 E-value=0.16 Score=61.89 Aligned_cols=44 Identities=16% Similarity=0.202 Sum_probs=40.5
Q ss_pred CCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEe
Q psy15568 855 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLF 898 (1231)
Q Consensus 855 ~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~Gsli 898 (1231)
.+|+.++++||++.++.+...+++.++..|++.|++..+|+.+.
T Consensus 338 v~gK~VlLVDDvitTG~Tl~~a~~~Lr~aGA~~V~v~~~hp~~~ 381 (445)
T PRK08525 338 LEGKRIVVIDDSIVRGTTSKKIVSLLRAAGAKEIHLRIACPEIK 381 (445)
T ss_pred cCCCeEEEEecccCcHHHHHHHHHHHHhcCCCEEEEEEECCCcC
Confidence 56888999999999999999999999999999999999998775
No 128
>KOG0496|consensus
Probab=91.73 E-value=0.93 Score=56.14 Aligned_cols=112 Identities=15% Similarity=0.164 Sum_probs=78.0
Q ss_pred EEECCeeEEEecceecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEE---ccCCCCCCh------------HHHHHHHhH
Q psy15568 189 FEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLR---VWGGGVYMS------------DYFYETCDE 253 (1231)
Q Consensus 189 f~lNG~pvflrG~n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR---~wggg~~~~------------~~fydlcDe 253 (1231)
|.+||+|..+-....| ..|.++ +.+..+|+.+|++|+|.|- +|. +|-|. ..|..+|-+
T Consensus 27 ~~idG~r~~~isGsIH-----Y~R~~p-e~W~~~i~k~k~~Gln~IqtYVfWn-~Hep~~g~y~FsG~~DlvkFikl~~~ 99 (649)
T KOG0496|consen 27 LLIDGQRFILISGSIH-----YPRSTP-EMWPDLIKKAKAGGLNVIQTYVFWN-LHEPSPGKYDFSGRYDLVKFIKLIHK 99 (649)
T ss_pred eeecCCeeEEEEeccc-----cccCCh-hhhHHHHHHHHhcCCceeeeeeecc-cccCCCCcccccchhHHHHHHHHHHH
Confidence 9999999776665443 337887 9999999999999999997 465 34443 489999999
Q ss_pred cCCEEEEe--------c-----ccccCCCC------CCHHHHHHHHHHHHHHHHHhC-----CCceeEEeccccCCcc
Q psy15568 254 LGILIWQD--------M-----MFACNNYP------ATPTFLQSVRSEISQTVRRVQ-----HHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 254 ~GIlVw~e--------~-----~~~~~~~~------~~~~~~~~~~~e~~~~i~r~r-----nHPSii~W~~~NE~~~ 307 (1231)
.|++|.-- + |++-...| +++.|...+++-++..+.+.+ |===|||=-+-||-..
T Consensus 100 ~GLyv~LRiGPyIcaEw~~GG~P~wL~~~pg~~~Rt~nepfk~~~~~~~~~iv~~mk~L~~~qGGPIIl~QIENEYG~ 177 (649)
T KOG0496|consen 100 AGLYVILRIGPYICAEWNFGGLPWWLRNVPGIVFRTDNEPFKAEMERWTTKIVPMMKKLFASQGGPIILVQIENEYGN 177 (649)
T ss_pred CCeEEEecCCCeEEecccCCCcchhhhhCCceEEecCChHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEeechhhH
Confidence 99999643 2 32222222 467788888777766666333 2223566667787653
No 129
>PRK12560 adenine phosphoribosyltransferase; Provisional
Probab=91.63 E-value=0.42 Score=51.36 Aligned_cols=71 Identities=17% Similarity=0.053 Sum_probs=50.0
Q ss_pred eEEEEeccccccccccCcccccccCchhH----HHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 596 HIITMDLHQKEIQGFFDCPVDNLRASPFL----LQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 596 ~vitvDlHs~~~~~~F~~p~~~l~a~~~l----~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
+++.--+|+.....|+++- .+.. |.+ ++.+.+.+ +.+--+|++|+.|+..+|..+|..+++|++++.|.|.
T Consensus 11 ~~~~~~~~~~~~~~~~D~~--~~l~-P~~l~~~~~~l~~~~-~~~~D~Ivg~e~~Gi~lA~~vA~~l~~p~~~~rk~~~ 85 (187)
T PRK12560 11 RVVNSGKALTTVNEFTDQL--PALR-PKVLKETAKEIIKYI-DKDIDKIVTEEDKGAPLATPVSLLSGKPLAMARWYPY 85 (187)
T ss_pred CccCCCCCCCcceeEEeCh--hhcC-HHHHHHHHHHHHHHh-CCCCCEEEEEccccHHHHHHHHHhhCCCEEEeccCCC
Confidence 5666667777767777742 2323 433 33344333 3344599999999999999999999999999988663
No 130
>PRK09525 lacZ beta-D-galactosidase; Reviewed
Probab=91.62 E-value=0.19 Score=67.34 Aligned_cols=49 Identities=18% Similarity=0.201 Sum_probs=36.9
Q ss_pred hhhhHHHHHHHhcC--cEEEEeCCCCCCcccccccccccccccCchhhHHhHHHHHHHhHHHHHHhhCCCCCccc
Q psy15568 720 AAKKATSYAERLRL--GIAVIHGEQKESESDEYEVDLTRYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLT 792 (1231)
Q Consensus 720 ~~~Ea~~~v~Rlr~--SialW~G~NE~~~~~~~~~~~~~~~~~~~~~~~~dy~~Ly~~~l~~~v~~~Dp~rpY~~ 792 (1231)
..+|++.+|+|+|| ||++||++||... + . ..+.+-+.++++||+||..-
T Consensus 437 ~~~~~~~mV~RdrNHPSIi~WSlgNE~~~-----g--------------~-----~~~~l~~~~k~~DptRpV~y 487 (1027)
T PRK09525 437 MSERVTRMVQRDRNHPSIIIWSLGNESGH-----G--------------A-----NHDALYRWIKSNDPSRPVQY 487 (1027)
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCccCCCc-----C--------------h-----hHHHHHHHHHhhCCCCcEEE
Confidence 46789999999996 9999999999631 1 0 12334578899999999543
No 131
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=90.70 E-value=0.45 Score=50.84 Aligned_cols=38 Identities=29% Similarity=0.559 Sum_probs=32.6
Q ss_pred CCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy15568 854 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 891 (1231)
Q Consensus 854 ~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~ 891 (1231)
+..|+.++++||+.+++.+...+.+.++..|++++++.
T Consensus 94 ~v~gk~VLIVDDIidTG~Tl~~~~~~Lk~~Ga~~V~~a 131 (181)
T PRK09162 94 SLKGRTVLVVDDILDEGHTLAAIRDRCLEMGAAEVYSA 131 (181)
T ss_pred CCCCCEEEEEccccCcHHHHHHHHHHHHhCCCCEEEEE
Confidence 56688899999999999999999999998887755544
No 132
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=90.21 E-value=0.52 Score=49.66 Aligned_cols=36 Identities=22% Similarity=0.389 Sum_probs=30.6
Q ss_pred CCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHh
Q psy15568 854 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIY 889 (1231)
Q Consensus 854 ~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~ 889 (1231)
+.+|+.++++||+.+++.+...+.+.++..+++.++
T Consensus 81 ~~~gk~vlivDDii~TG~Tl~~~~~~l~~~g~~~i~ 116 (166)
T TIGR01203 81 SIKGKDVLIVEDIVDTGLTLQYLLDLLKARKPKSLK 116 (166)
T ss_pred CCCCCEEEEEeeeeCcHHHHHHHHHHHHHCCCCEEE
Confidence 456888999999999999999999999887776443
No 133
>PRK02304 adenine phosphoribosyltransferase; Provisional
Probab=86.54 E-value=1.9 Score=45.72 Aligned_cols=54 Identities=19% Similarity=0.169 Sum_probs=39.6
Q ss_pred cccCchhHHHHhh----hhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 617 NLRASPFLLQYIQ----DSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 617 ~l~a~~~l~~~l~----~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
++...|.+.+++. +.+.+.+..+||+|+.|+...|..+|..|++|++++.|.+.
T Consensus 28 ~l~~~p~~~~~~~~~la~~~~~~~~d~Ivgv~~~Gi~~a~~la~~l~~p~~~~rk~~~ 85 (175)
T PRK02304 28 PLLADPEAFREVIDALVERYKDADIDKIVGIEARGFIFGAALAYKLGIGFVPVRKPGK 85 (175)
T ss_pred hHhcCHHHHHHHHHHHHHHhccCCCCEEEEEccchHHHHHHHHHHhCCCEEEEEcCCC
Confidence 5555555544443 32223345799999999999999999999999999877653
No 134
>PRK07322 adenine phosphoribosyltransferase; Provisional
Probab=85.02 E-value=1.7 Score=46.32 Aligned_cols=66 Identities=14% Similarity=0.114 Sum_probs=53.6
Q ss_pred ccccccccCcccccccCchhHHHHhhhh----CCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 604 QKEIQGFFDCPVDNLRASPFLLQYIQDS----IPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 604 s~~~~~~F~~p~~~l~a~~~l~~~l~~~----~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
.-+++++|.++..++...|.+++.+.+. ++. +..+||+++.|++..|..+|..|++++.++.|.+.
T Consensus 17 ~~~~~~~~~i~~~k~~~dp~l~~~~~~~La~~l~~-~~d~Iv~v~~gGiplA~~lA~~L~~p~~~~~k~~~ 86 (178)
T PRK07322 17 LIRVGPDLAIALFVILGDTELTEAAAEALAKRLPT-EVDVLVTPETKGIPLAHALSRRLGKPYVVARKSRK 86 (178)
T ss_pred eeEeCCCCEEEEEhhhCCHHHHHHHHHHHHHHcCC-CCCEEEEeccCCHHHHHHHHHHHCCCEEEEEEeCC
Confidence 4467888899999999988887766443 433 45699999999999999999999999988877654
No 135
>TIGR03356 BGL beta-galactosidase.
Probab=84.89 E-value=3.4 Score=50.35 Aligned_cols=90 Identities=16% Similarity=0.074 Sum_probs=65.2
Q ss_pred hHHHHHHHHHHHHcCCCEEEccC--------C-CCCCh------HHHHHHHhHcCCEEEEec-----ccccCCC--CCCH
Q psy15568 216 ESTIRDLLVSTKEANMNMLRVWG--------G-GVYMS------DYFYETCDELGILIWQDM-----MFACNNY--PATP 273 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~iR~wg--------g-g~~~~------~~fydlcDe~GIlVw~e~-----~~~~~~~--~~~~ 273 (1231)
..+++++|+++|++|+|++|+=- | +.+-. +.+.+.|-+.||-++.++ |.+.... -.++
T Consensus 53 y~~y~eDi~l~~~~G~~~~R~si~Wsri~p~g~~~~n~~~~~~y~~~i~~l~~~gi~pivtL~Hfd~P~~l~~~gGw~~~ 132 (427)
T TIGR03356 53 YHRYEEDVALMKELGVDAYRFSIAWPRIFPEGTGPVNPKGLDFYDRLVDELLEAGIEPFVTLYHWDLPQALEDRGGWLNR 132 (427)
T ss_pred HHhHHHHHHHHHHcCCCeEEcccchhhcccCCCCCcCHHHHHHHHHHHHHHHHcCCeeEEeeccCCccHHHHhcCCCCCh
Confidence 37899999999999999999710 0 11111 577889999999998876 2221100 1246
Q ss_pred HHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 274 TFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 274 ~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
++.+...+-++..++++.. .|-.|..-||...
T Consensus 133 ~~~~~f~~ya~~~~~~~~d--~v~~w~t~NEp~~ 164 (427)
T TIGR03356 133 DTAEWFAEYAAVVAERLGD--RVKHWITLNEPWC 164 (427)
T ss_pred HHHHHHHHHHHHHHHHhCC--cCCEEEEecCcce
Confidence 6777788888899999998 5788899999843
No 136
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=83.56 E-value=1.6 Score=53.56 Aligned_cols=45 Identities=18% Similarity=0.266 Sum_probs=40.3
Q ss_pred CCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEe
Q psy15568 854 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLF 898 (1231)
Q Consensus 854 ~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~Gsli 898 (1231)
..+|+.++++||.+.++.+...+.+.++..|++.|++..+|+.+.
T Consensus 350 ~v~gk~VlLVDD~ItTGtTl~~~~~~Lr~aGAk~V~~~~~~p~~~ 394 (469)
T PRK05793 350 NVEGKRVVLIDDSIVRGTTSKRLVELLRKAGAKEVHFRVSSPPVK 394 (469)
T ss_pred ccCCCEEEEEccccCchHHHHHHHHHHHHcCCCEEEEEEECCCcC
Confidence 456888999999999999999999999999999999999987663
No 137
>KOG1017|consensus
Probab=82.46 E-value=2.9 Score=44.12 Aligned_cols=69 Identities=19% Similarity=0.289 Sum_probs=46.8
Q ss_pred eccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCC-eEEEEEEecCCC-CChhhhh-hcCCCCEEEEeCCccC
Q psy15568 1118 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAY-KIYVLATHGLLS-SDAPLLI-EESPIDEVVVTNTIPH 1188 (1231)
Q Consensus 1118 ~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~-~v~~~~th~~~~-~~a~~~l-~~~~~~~i~~t~ti~~ 1188 (1231)
+-.|+--|.|++.=-+++||.|+++|++.|+++|.. +++..+ .+|. .-+.+.+ ++-+-=.|++++-.|.
T Consensus 183 fppDI~sR~VLLmYPi~stGnTV~~Av~VL~EhgVp~s~IiL~--sLF~tP~gak~i~~~fP~itiltseihpv 254 (267)
T KOG1017|consen 183 FPPDITSRRVLLMYPIISTGNTVCKAVEVLKEHGVPDSNIILV--SLFITPTGAKNITRKFPYITILTSEIHPV 254 (267)
T ss_pred cCCcccceeEEEEeeeecCCccHHHHHHHHHHcCCCcccEEEE--EeeecchhhHHHHHhCCeEEEEeecceec
Confidence 456888999999999999999999999999999986 344444 2444 3333444 3323334445554444
No 138
>TIGR00336 pyrE orotate phosphoribosyltransferase. The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.
Probab=82.36 E-value=4.8 Score=42.67 Aligned_cols=42 Identities=21% Similarity=0.363 Sum_probs=33.0
Q ss_pred CCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEecCC
Q psy15568 856 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDYD 901 (1231)
Q Consensus 856 ~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~GsliDy~ 901 (1231)
.|+.++++||+.+++.+...+.+.++..|++ .....+++|+.
T Consensus 107 ~g~~VlIVDDvi~TG~Tl~~a~~~l~~~Ga~----v~~~~vlvdr~ 148 (173)
T TIGR00336 107 EGDKVVVVEDVITTGTSILEAVEIIQAAGGQ----VAGVIIAVDRQ 148 (173)
T ss_pred CCCEEEEEeccccChHHHHHHHHHHHHcCCe----EEEEEEEEecC
Confidence 4667999999999999999999999887764 23334678764
No 139
>PRK00455 pyrE orotate phosphoribosyltransferase; Validated
Probab=81.14 E-value=5.6 Score=43.25 Aligned_cols=32 Identities=22% Similarity=0.266 Sum_probs=29.1
Q ss_pred cEEEecCCChhhhHHHHHHhhCCcEEEEeccc
Q psy15568 638 AVIVAKNPGAAKKATSYAERLRLGIAVIHGEQ 669 (1231)
Q Consensus 638 ~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r 669 (1231)
.+||+|+.|+...|..+|..|++++.++.|.+
T Consensus 66 d~Ivgi~~gG~~~A~~la~~L~~~~~~~rk~~ 97 (202)
T PRK00455 66 DVVAGPATGGIPLAAAVARALDLPAIFVRKEA 97 (202)
T ss_pred CEEEecccCcHHHHHHHHHHhCCCEEEEeccc
Confidence 48999999999999999999999999887754
No 140
>PLN02293 adenine phosphoribosyltransferase
Probab=77.60 E-value=7.5 Score=41.81 Aligned_cols=35 Identities=9% Similarity=-0.023 Sum_probs=32.1
Q ss_pred CCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 636 KNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 636 ~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
+..+|++|+.+|...|..+|..|+++++++.|.|.
T Consensus 62 ~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~rK~~k 96 (187)
T PLN02293 62 GISVVAGIEARGFIFGPPIALAIGAKFVPLRKPGK 96 (187)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHCCCEEEEEecCC
Confidence 45689999999999999999999999999999874
No 141
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=77.44 E-value=8.8 Score=40.95 Aligned_cols=33 Identities=24% Similarity=0.492 Sum_probs=29.0
Q ss_pred CCCCceeeechhhhhhHHHHHHHHHHHHHHHHH
Q psy15568 854 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAY 886 (1231)
Q Consensus 854 ~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~ 886 (1231)
+.+|+.++++||+.+++.+...+.+.++..+.+
T Consensus 89 ~v~gk~VLlVDDIiDTG~TL~~l~~~l~~~~~~ 121 (178)
T PRK15423 89 DIRGKDVLIVEDIIDSGNTLSKVREILSLREPK 121 (178)
T ss_pred CCCCCEEEEEeeecCchHHHHHHHHHHHhCCCC
Confidence 567899999999999999999999998877664
No 142
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=76.94 E-value=8.6 Score=43.02 Aligned_cols=44 Identities=18% Similarity=0.233 Sum_probs=34.7
Q ss_pred CCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEecCCC
Q psy15568 855 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDYDG 902 (1231)
Q Consensus 855 ~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~GsliDy~G 902 (1231)
..|+-++++||+.+++.+...+.++++..|++ ....+++++...
T Consensus 174 ~~G~rVLIVDDvi~TG~Tl~~~~~ll~~~ga~----vvgv~vlv~~~~ 217 (238)
T PRK08558 174 KKGDRVLIVDDIIRSGETQRALLDLARQAGAD----VVGVFFLIAVGE 217 (238)
T ss_pred CCcCEEEEEecccccCHHHHHHHHHHHHcCCE----EEEEEEEEecCc
Confidence 35777999999999999999999999888765 344467777643
No 143
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]
Probab=76.81 E-value=11 Score=41.99 Aligned_cols=86 Identities=9% Similarity=0.081 Sum_probs=68.9
Q ss_pred CCCChHHHHHHHHHHHHcCCCEEEccCCCCCCh-HHHHHHHhHcCCEEEEecccccCCCCCCHHHHHHHHHHHHHHHHHh
Q psy15568 212 RSNNESTIRDLLVSTKEANMNMLRVWGGGVYMS-DYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRV 290 (1231)
Q Consensus 212 ~~~~~~~~~~~l~~~k~~g~N~iR~wggg~~~~-~~fydlcDe~GIlVw~e~~~~~~~~~~~~~~~~~~~~e~~~~i~r~ 290 (1231)
++...++++.+|++++.... +||++| ..+.. +...-++-..|+-|...... . ++....+.+++..+++..
T Consensus 58 tCKSa~~~~sDLe~l~~~t~-~IR~Y~-sDCn~le~v~pAa~~~g~kv~lGiw~------t-dd~~~~~~~til~ay~~~ 128 (305)
T COG5309 58 TCKSADQVASDLELLASYTH-SIRTYG-SDCNTLENVLPAAEASGFKVFLGIWP------T-DDIHDAVEKTILSAYLPY 128 (305)
T ss_pred CCcCHHHHHhHHHHhccCCc-eEEEee-ccchhhhhhHHHHHhcCceEEEEEee------c-cchhhhHHHHHHHHHhcc
Confidence 44444899999999999887 999997 34543 68899999999999887643 2 233456667888999999
Q ss_pred CCCceeEEeccccCCc
Q psy15568 291 QHHPCIAVWAGNNEME 306 (1231)
Q Consensus 291 rnHPSii~W~~~NE~~ 306 (1231)
..-+.|.....|||..
T Consensus 129 ~~~d~v~~v~VGnEal 144 (305)
T COG5309 129 NGWDDVTTVTVGNEAL 144 (305)
T ss_pred CCCCceEEEEechhhh
Confidence 9999999999999984
No 144
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=76.08 E-value=6.4 Score=46.08 Aligned_cols=90 Identities=18% Similarity=0.277 Sum_probs=54.2
Q ss_pred HHHHHHHHHcCCCEEE--ccC----CCCCChH---HHHHHHhHcCCEEEEecccccC-------CCC----C-C-HHHHH
Q psy15568 220 RDLLVSTKEANMNMLR--VWG----GGVYMSD---YFYETCDELGILIWQDMMFACN-------NYP----A-T-PTFLQ 277 (1231)
Q Consensus 220 ~~~l~~~k~~g~N~iR--~wg----gg~~~~~---~fydlcDe~GIlVw~e~~~~~~-------~~~----~-~-~~~~~ 277 (1231)
+..++++|+.|+|+|| +|- ||.+--+ +.-..+-++||-|.-||.+... .-| . + .+..+
T Consensus 27 ~d~~~ilk~~G~N~vRlRvwv~P~~~g~~~~~~~~~~akrak~~Gm~vlldfHYSD~WaDPg~Q~~P~aW~~~~~~~l~~ 106 (332)
T PF07745_consen 27 KDLFQILKDHGVNAVRLRVWVNPYDGGYNDLEDVIALAKRAKAAGMKVLLDFHYSDFWADPGKQNKPAAWANLSFDQLAK 106 (332)
T ss_dssp --HHHHHHHTT--EEEEEE-SS-TTTTTTSHHHHHHHHHHHHHTT-EEEEEE-SSSS--BTTB-B--TTCTSSSHHHHHH
T ss_pred CCHHHHHHhcCCCeEEEEeccCCcccccCCHHHHHHHHHHHHHCCCeEEEeecccCCCCCCCCCCCCccCCCCCHHHHHH
Confidence 4578999999999987 442 1333333 5666777899999999965221 112 1 1 44566
Q ss_pred HHHHHHHHHHHHhCCCc-eeEEeccccCCccCC
Q psy15568 278 SVRSEISQTVRRVQHHP-CIAVWAGNNEMEAHN 309 (1231)
Q Consensus 278 ~~~~e~~~~i~r~rnHP-Sii~W~~~NE~~~h~ 309 (1231)
.+.+..++.+..+++.= ..=|+.+|||+...+
T Consensus 107 ~v~~yT~~vl~~l~~~G~~pd~VQVGNEin~Gm 139 (332)
T PF07745_consen 107 AVYDYTKDVLQALKAAGVTPDMVQVGNEINNGM 139 (332)
T ss_dssp HHHHHHHHHHHHHHHTT--ESEEEESSSGGGES
T ss_pred HHHHHHHHHHHHHHHCCCCccEEEeCccccccc
Confidence 77777778887776653 345677999997643
No 145
>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B ....
Probab=76.03 E-value=4.3 Score=40.11 Aligned_cols=52 Identities=13% Similarity=0.242 Sum_probs=35.7
Q ss_pred CCceeccCCCCCEEEEEecccCc-HH---HHHHHHHHHHhcCCCeEEEEEEecCCCCC
Q psy15568 1114 PPISVVGDVGGRVAIMVDDMVDD-VH---SFVAAAEVLKDRGAYKIYVLATHGLLSSD 1167 (1231)
Q Consensus 1114 ~~~~~~~~v~gk~~iivDDii~t-G~---T~~~~~~~l~~~ga~~v~~~~th~~~~~~ 1167 (1231)
.-..+.++++|++|+||=++... -. -+.-+++++++.||++|.++. |.|.-.
T Consensus 37 ~~v~i~~~v~g~dv~iiqs~~~~~nd~lmeLll~i~a~r~~~a~~i~~Vi--PYl~Ya 92 (116)
T PF13793_consen 37 TYVRIPESVRGKDVFIIQSTSPPVNDNLMELLLLIDALRRAGAKRITLVI--PYLPYA 92 (116)
T ss_dssp EEEEESS--TTSEEEEE---SSSHHHHHHHHHHHHHHHHHTTBSEEEEEE--SS-TTT
T ss_pred EEEEecccccCCceEEEEecCCchhHHHHHHHHHHHHHHHcCCcEEEEec--cchhhh
Confidence 34467789999999999999876 22 345567999999999999999 777643
No 146
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional
Probab=72.98 E-value=9.7 Score=47.06 Aligned_cols=88 Identities=14% Similarity=0.198 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHcCCCEEEc---c------C-CCCC-Ch-----HHHHHHHhHcCCEEEEec-----ccccCC-C--CCC
Q psy15568 217 STIRDLLVSTKEANMNMLRV---W------G-GGVY-MS-----DYFYETCDELGILIWQDM-----MFACNN-Y--PAT 272 (1231)
Q Consensus 217 ~~~~~~l~~~k~~g~N~iR~---w------g-gg~~-~~-----~~fydlcDe~GIlVw~e~-----~~~~~~-~--~~~ 272 (1231)
.+++++|++||++|+|+.|+ | | ++.. +. +.+.+.|-+.||-.+..+ |.+-.. | -.+
T Consensus 69 hry~EDI~Lm~elG~~~yRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~l~~~GI~P~vTL~H~dlP~~L~~~yGGW~n 148 (477)
T PRK15014 69 GHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTN 148 (477)
T ss_pred cccHHHHHHHHHcCCCEEEecccceeeccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHHHHhcCCCCC
Confidence 68999999999999999996 2 1 1111 11 467789999999888665 332211 1 134
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceeEEeccccCCc
Q psy15568 273 PTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEME 306 (1231)
Q Consensus 273 ~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~ 306 (1231)
++..+...+-++-.++++... |=.|..-||..
T Consensus 149 ~~~~~~F~~Ya~~~f~~fgdr--Vk~WiT~NEp~ 180 (477)
T PRK15014 149 RKVVDFFVRFAEVVFERYKHK--VKYWMTFNEIN 180 (477)
T ss_pred hHHHHHHHHHHHHHHHHhcCc--CCEEEEecCcc
Confidence 667778888888999999887 77999999983
No 147
>PRK13511 6-phospho-beta-galactosidase; Provisional
Probab=72.68 E-value=11 Score=46.57 Aligned_cols=89 Identities=13% Similarity=0.201 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHHHcCCCEEEc---c------CCCCCCh------HHHHHHHhHcCCEEEEec-----ccccCCCC--CCH
Q psy15568 216 ESTIRDLLVSTKEANMNMLRV---W------GGGVYMS------DYFYETCDELGILIWQDM-----MFACNNYP--ATP 273 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~iR~---w------ggg~~~~------~~fydlcDe~GIlVw~e~-----~~~~~~~~--~~~ 273 (1231)
..++++++++||++|+|+.|+ | |.|..-. +.+.+.|-++||-.+..+ |.+-.... .++
T Consensus 53 Y~ry~eDi~L~~~lG~~~yRfSIsWsRI~P~G~g~vN~~gl~~Y~~lid~l~~~GI~P~VTL~H~dlP~~L~~~GGW~n~ 132 (469)
T PRK13511 53 YHRYPEDLKLAEEFGVNGIRISIAWSRIFPDGYGEVNPKGVEYYHRLFAECHKRHVEPFVTLHHFDTPEALHSNGDWLNR 132 (469)
T ss_pred hhhhHHHHHHHHHhCCCEEEeeccHhhcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCcHHHHHcCCCCCH
Confidence 378999999999999999996 1 2111111 467789999999877664 33221111 246
Q ss_pred HHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 274 TFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 274 ~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
+..+.+.+-++..++++.. |=.|.--||...
T Consensus 133 ~~v~~F~~YA~~~~~~fgd---Vk~W~T~NEP~~ 163 (469)
T PRK13511 133 ENIDHFVRYAEFCFEEFPE---VKYWTTFNEIGP 163 (469)
T ss_pred HHHHHHHHHHHHHHHHhCC---CCEEEEccchhh
Confidence 6677778888899999988 899999999843
No 148
>COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism]
Probab=69.52 E-value=16 Score=44.34 Aligned_cols=88 Identities=17% Similarity=0.164 Sum_probs=60.4
Q ss_pred HHHHHHHHHHcCCCEEEccCC----CCCC---h-----------HHHHHHHhHcCCEEEEecc-cc--cC---------C
Q psy15568 219 IRDLLVSTKEANMNMLRVWGG----GVYM---S-----------DYFYETCDELGILIWQDMM-FA--CN---------N 268 (1231)
Q Consensus 219 ~~~~l~~~k~~g~N~iR~wgg----g~~~---~-----------~~fydlcDe~GIlVw~e~~-~~--~~---------~ 268 (1231)
.+.++..+|++|||+||+=-| .++. + ++..+.|.++||.||.|+- .. +. .
T Consensus 75 ~~~~~~~ik~~G~n~VRiPi~~~~~~~~~~~~p~~~~~~~~~~ld~~I~~a~~~gi~V~iD~H~~~~~~~~~~~s~~~~~ 154 (407)
T COG2730 75 TEEDFDQIKSAGFNAVRIPIGYWALQATDGDNPYLIGLTQLKILDEAINWAKKLGIYVLIDLHGYPGGNNGHEHSGYTSD 154 (407)
T ss_pred hhhHHHHHHHcCCcEEEcccchhhhhccCCCCCCeecchHHHHHHHHHHHHHhcCeeEEEEecccCCCCCCcCccccccc
Confidence 388999999999999996333 2221 1 3447778899999999962 22 11 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCceeEEeccccCCc
Q psy15568 269 YPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEME 306 (1231)
Q Consensus 269 ~~~~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~ 306 (1231)
|.....-.+...+-.+.+..|+++-+-|+....-||+.
T Consensus 155 ~~~~~~~~~~~~~~w~~ia~~f~~~~~VIg~~~~NEP~ 192 (407)
T COG2730 155 YKEENENVEATIDIWKFIANRFKNYDTVIGFELINEPN 192 (407)
T ss_pred ccccchhHHHHHHHHHHHHHhccCCCceeeeeeecCCc
Confidence 11111122344555679999999999999999999995
No 149
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=68.72 E-value=22 Score=37.73 Aligned_cols=32 Identities=34% Similarity=0.457 Sum_probs=28.8
Q ss_pred CCCCCceeeechhhhhhHHHHHHHHHHHHHHH
Q psy15568 853 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRG 884 (1231)
Q Consensus 853 g~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~ 884 (1231)
++.+|+.++++||+.+++.+...+.+.++..|
T Consensus 91 ~~v~gr~VLIVDDIidTG~Tl~~~~~~L~~~G 122 (176)
T PRK05205 91 FDIEGKRVILVDDVLYTGRTIRAALDALFDYG 122 (176)
T ss_pred CCCCCCEEEEEecccCcHHHHHHHHHHHHhcC
Confidence 35678889999999999999999999998876
No 150
>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional
Probab=68.32 E-value=17 Score=39.61 Aligned_cols=33 Identities=27% Similarity=0.507 Sum_probs=29.1
Q ss_pred CCCCceeeechhhhhhHHHHHHHHHHHHHHHHH
Q psy15568 854 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAY 886 (1231)
Q Consensus 854 ~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~ 886 (1231)
...|+.++++||+..++.+...+.+.++..|++
T Consensus 137 ~~~gk~VlIVDDVitTG~Tl~~ai~~l~~~Ga~ 169 (200)
T PRK02277 137 SVEGKRCVIVDDVITSGTTMKETIEYLKEHGGK 169 (200)
T ss_pred cCCcCEEEEEeeccCchHHHHHHHHHHHHcCCE
Confidence 456888999999999999999999999887765
No 151
>COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]
Probab=65.91 E-value=18 Score=43.36 Aligned_cols=45 Identities=22% Similarity=0.406 Sum_probs=31.9
Q ss_pred HHHHHHHHHcCCCEEEccCCCCC--------------------------Ch-----HHHHHHHhHcCCEEEEeccc
Q psy15568 220 RDLLVSTKEANMNMLRVWGGGVY--------------------------MS-----DYFYETCDELGILIWQDMMF 264 (1231)
Q Consensus 220 ~~~l~~~k~~g~N~iR~wggg~~--------------------------~~-----~~fydlcDe~GIlVw~e~~~ 264 (1231)
...|+.+|++.+-.||.=||... |+ .+|.++|...|.-...-..+
T Consensus 52 kDVle~lk~Lk~P~lR~PGGnFvs~Y~WeDGIGP~e~Rp~rldlaW~t~EtN~~Gt~EF~~~~e~iGaep~~avN~ 127 (501)
T COG3534 52 KDVLEALKDLKIPVLRWPGGNFVSGYHWEDGIGPREERPRRLDLAWGTTETNEFGTHEFMDWCELIGAEPYIAVNL 127 (501)
T ss_pred HHHHHHHHhcCCceeecCCcccccccccccCcCchhhCchhhcccccccccccccHHHHHHHHHHhCCceEEEEec
Confidence 45578889999999997665321 11 58999999999866554433
No 152
>COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism]
Probab=64.64 E-value=1.3e+02 Score=35.02 Aligned_cols=62 Identities=18% Similarity=0.215 Sum_probs=45.1
Q ss_pred hHHHHHHHhHcCC------EEEEec-ccccCCC-CCCHHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 244 SDYFYETCDELGI------LIWQDM-MFACNNY-PATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 244 ~~~fydlcDe~GI------lVw~e~-~~~~~~~-~~~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
.|..++.|-+.|| |||.-. |-|-... -..+.+.+.+++.+...+.|+++- ++.|-+-||.-.
T Consensus 84 AD~ia~FAr~h~m~lhGHtLvW~~q~P~W~~~~e~~~~~~~~~~e~hI~tV~~rYkg~--~~sWDVVNE~vd 153 (345)
T COG3693 84 ADAIANFARKHNMPLHGHTLVWHSQVPDWLFGDELSKEALAKMVEEHIKTVVGRYKGS--VASWDVVNEAVD 153 (345)
T ss_pred hHHHHHHHHHcCCeeccceeeecccCCchhhccccChHHHHHHHHHHHHHHHHhccCc--eeEEEecccccC
Confidence 4788899999998 456442 2111111 123668889999999999999986 999999999865
No 153
>TIGR01233 lacG 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=64.60 E-value=21 Score=44.05 Aligned_cols=89 Identities=13% Similarity=0.187 Sum_probs=63.0
Q ss_pred hHHHHHHHHHHHHcCCCEEEc---c------CCCCCCh------HHHHHHHhHcCCEEEEec-----ccccCCCC--CCH
Q psy15568 216 ESTIRDLLVSTKEANMNMLRV---W------GGGVYMS------DYFYETCDELGILIWQDM-----MFACNNYP--ATP 273 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~iR~---w------ggg~~~~------~~fydlcDe~GIlVw~e~-----~~~~~~~~--~~~ 273 (1231)
..+++.++++||++|+|+.|+ | |.|..-. +.+.+.|-+.||-.+.-+ |.+-.... .++
T Consensus 52 yhry~eDi~L~~~lG~~~yRfSIsWsRI~P~g~~~~N~~gl~~Y~~lid~l~~~GI~P~VTL~H~dlP~~L~~~GGW~n~ 131 (467)
T TIGR01233 52 YHKYPVDLELAEEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSNGDFLNR 131 (467)
T ss_pred hhhHHHHHHHHHHcCCCEEEEecchhhccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEeccCCCCcHHHHHcCCCCCH
Confidence 378999999999999999996 2 1111111 455678899999887654 33221111 246
Q ss_pred HHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 274 TFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 274 ~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
+..+...+-++-.++++. . |=.|.--||...
T Consensus 132 ~~v~~F~~YA~~~f~~fg-d--Vk~WiT~NEP~~ 162 (467)
T TIGR01233 132 ENIEHFIDYAAFCFEEFP-E--VNYWTTFNEIGP 162 (467)
T ss_pred HHHHHHHHHHHHHHHHhC-C--CCEEEEecchhh
Confidence 667777788889999997 3 889999999843
No 154
>PF15610 PRTase_3: PRTase ComF-like
Probab=60.73 E-value=9.6 Score=42.83 Aligned_cols=53 Identities=13% Similarity=0.149 Sum_probs=40.1
Q ss_pred CCCCCCCCCceec-cCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1107 QHPAKEKPPISVV-GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1107 r~~~~~~~~~~~~-~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
|..-+..+.+.+- ..++||+||.+|||--||++=....+.+++.|++....+.
T Consensus 120 R~~li~nd~y~ID~~~l~gk~lIflDDIkITGshE~~V~~~~~~~~~~~~~~yl 173 (274)
T PF15610_consen 120 RKSLISNDTYHIDKEFLSGKHLIFLDDIKITGSHEDKVRKILKEYGLENDFIYL 173 (274)
T ss_pred hhccccCCceEecHHHhCCcEEEEeccEEecCcHHHHHHHHHHHcCccccEEEE
Confidence 3333444444443 3479999999999999999999999999999999754443
No 155
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=58.98 E-value=16 Score=40.08 Aligned_cols=38 Identities=45% Similarity=0.587 Sum_probs=31.8
Q ss_pred CCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy15568 854 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 891 (1231)
Q Consensus 854 ~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~ 891 (1231)
+..|+.++++|++.+++.+.+.+.+.++..|+++|.+.
T Consensus 121 ~i~~~~VllvDd~laTG~Tl~~ai~~L~~~G~~~I~~~ 158 (209)
T PRK00129 121 DIDERTVIVVDPMLATGGSAIAAIDLLKKRGAKNIKVL 158 (209)
T ss_pred cCCCCEEEEECCcccchHHHHHHHHHHHHcCCCEEEEE
Confidence 45577899999999999999999999999887655443
No 156
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=56.28 E-value=30 Score=37.30 Aligned_cols=35 Identities=31% Similarity=0.560 Sum_probs=30.2
Q ss_pred CCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHH
Q psy15568 854 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKI 888 (1231)
Q Consensus 854 ~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i 888 (1231)
+..|+.++++||+.+++.+...+.+.++..+++.+
T Consensus 94 ~v~gk~VliVDDIidTG~Tl~~~~~~l~~~g~~~v 128 (189)
T PLN02238 94 DVKGKHVLLVEDIVDTGNTLSALVAHLEAKGAASV 128 (189)
T ss_pred CCCCCEEEEEecccchHHHHHHHHHHHHhCCCCEE
Confidence 56788899999999999999999999988877633
No 157
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional
Probab=53.38 E-value=39 Score=41.76 Aligned_cols=90 Identities=13% Similarity=0.238 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHHcCCCEEEc---c------C-CCCCCh------HHHHHHHhHcCCEEEEec-----ccccCC-CC--C
Q psy15568 216 ESTIRDLLVSTKEANMNMLRV---W------G-GGVYMS------DYFYETCDELGILIWQDM-----MFACNN-YP--A 271 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~iR~---w------g-gg~~~~------~~fydlcDe~GIlVw~e~-----~~~~~~-~~--~ 271 (1231)
..+++.++++|+++|+|+.|+ | | ++.... +.+.+.|-+.||-.+..+ |.+-.. +- .
T Consensus 70 Yhry~eDi~l~~~lG~~~yR~si~WsRi~P~g~~~~~n~~~~~~Y~~~i~~l~~~gi~p~VtL~H~~~P~~l~~~~GGW~ 149 (474)
T PRK09852 70 YHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWR 149 (474)
T ss_pred hhhhHHHHHHHHHcCCCeEEeeceeeeeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHHHHhcCCCC
Confidence 368899999999999999996 1 0 111111 466778999999887665 332111 11 2
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 272 TPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 272 ~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
+++..+.+.+.++..++++... |=.|..-||...
T Consensus 150 ~~~~~~~F~~ya~~~~~~fgd~--Vk~WiTfNEPn~ 183 (474)
T PRK09852 150 NRKMVEFFSRYARTCFEAFDGL--VKYWLTFNEINI 183 (474)
T ss_pred CHHHHHHHHHHHHHHHHHhcCc--CCeEEeecchhh
Confidence 4566777778888999999876 457888999843
No 158
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B.
Probab=53.07 E-value=7.7 Score=36.21 Aligned_cols=20 Identities=35% Similarity=0.398 Sum_probs=17.0
Q ss_pred HHHHhCCCceeEEeccccCC
Q psy15568 286 TVRRVQHHPCIAVWAGNNEM 305 (1231)
Q Consensus 286 ~i~r~rnHPSii~W~~~NE~ 305 (1231)
.|.++++||.|.+|-+.||.
T Consensus 1 iv~~~~~~~~Il~Wdl~NE~ 20 (88)
T PF12876_consen 1 IVTRFGYDPRILAWDLWNEP 20 (88)
T ss_dssp -HHHTT-GGGEEEEESSTTT
T ss_pred CchhhcCCCCEEEEEeecCC
Confidence 37899999999999999995
No 159
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=49.61 E-value=22 Score=43.50 Aligned_cols=39 Identities=23% Similarity=0.386 Sum_probs=32.8
Q ss_pred CCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhc
Q psy15568 854 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 892 (1231)
Q Consensus 854 ~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~ 892 (1231)
..+|+..+++||.+.++.+.-.+++.++..|++.|.+..
T Consensus 331 ~v~gk~VlLVDD~IttGtTl~~~~~~L~~aGAk~V~~~~ 369 (442)
T PRK08341 331 VINGKRVVLVDDSIVRGTTMKRIVKMLRDAGAREVHVRI 369 (442)
T ss_pred ccCCCEEEEEeeeeccHHHHHHHHHHHHhcCCcEEEEEE
Confidence 346788999999999999999999999988988665443
No 160
>PLN02849 beta-glucosidase
Probab=48.33 E-value=53 Score=40.98 Aligned_cols=90 Identities=16% Similarity=0.270 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHHcCCCEEEc---c------CCCCCCh------HHHHHHHhHcCCEEEEec-----ccccCC-CC--CC
Q psy15568 216 ESTIRDLLVSTKEANMNMLRV---W------GGGVYMS------DYFYETCDELGILIWQDM-----MFACNN-YP--AT 272 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~iR~---w------ggg~~~~------~~fydlcDe~GIlVw~e~-----~~~~~~-~~--~~ 272 (1231)
..+|+++|++||++|+|+.|+ | |.|..-. +.+.+.|-+.||--+.-+ |.+-.. |- .+
T Consensus 78 YhrY~eDI~Lm~~lG~~aYRfSIsWsRI~P~G~g~vN~~gl~fY~~lid~l~~~GI~P~VTL~H~dlP~~L~~~yGGW~n 157 (503)
T PLN02849 78 YHKYKEDVKLMVETGLDAFRFSISWSRLIPNGRGSVNPKGLQFYKNFIQELVKHGIEPHVTLFHYDHPQYLEDDYGGWIN 157 (503)
T ss_pred HHhHHHHHHHHHHcCCCeEEEeccHHhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeecCCCCcHHHHHhcCCcCC
Confidence 478999999999999999996 1 1121111 467789999999877664 332211 11 24
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 273 PTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 273 ~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
++..+...+-++..++++... |=.|..-||...
T Consensus 158 r~~v~~F~~YA~~~f~~fgDr--Vk~WiT~NEP~~ 190 (503)
T PLN02849 158 RRIIKDFTAYADVCFREFGNH--VKFWTTINEANI 190 (503)
T ss_pred chHHHHHHHHHHHHHHHhcCc--CCEEEEecchhh
Confidence 455666677777888888764 568999999843
No 161
>PRK13810 orotate phosphoribosyltransferase; Provisional
Probab=47.79 E-value=71 Score=34.42 Aligned_cols=86 Identities=14% Similarity=0.154 Sum_probs=53.1
Q ss_pred HHHHHhhccCcceEEEEeccccccccc-cCcccccccCchhHHHH----hhhhCCCCCCcEEEecCCChhhhHHHHHHhh
Q psy15568 584 LLAKMMCTSGLKHIITMDLHQKEIQGF-FDCPVDNLRASPFLLQY----IQDSIPDYKNAVIVAKNPGAAKKATSYAERL 658 (1231)
Q Consensus 584 ~va~ll~~~g~d~vitvDlHs~~~~~~-F~~p~~~l~a~~~l~~~----l~~~~~~~~~~viVsPD~G~~kra~~~A~~L 658 (1231)
.+.++|...|+=..=.+.|-|.....+ |++. .+...|.+.+. +.+.+.+.+--.|++|..+|..-|..+|..+
T Consensus 18 ~l~~~l~~~ga~~~g~F~L~SG~~s~~yiD~~--~~~~~p~~~~~i~~~la~~~~~~~~d~I~g~~~~GiplA~~vA~~l 95 (187)
T PRK13810 18 ELIAALKACGAVRYGDFTLSSGKKSKYYIDIK--KASTDPKTLKLIARQAALRIKEMDVDTVAGVELGGVPLATAVSLET 95 (187)
T ss_pred HHHHHHHHCCCeEecCEEEcCCCcCCEEEECc--hhcCCHHHHHHHHHHHHHHhccCCCCEEEEEccchHHHHHHHHHHh
Confidence 345555555552211234445554443 3432 34444544333 3333333344589999999999999999999
Q ss_pred CCcEEEEeccccc
Q psy15568 659 RLGIAVIHGEQKE 671 (1231)
Q Consensus 659 ~~~~~~~~k~r~~ 671 (1231)
++|+.++.|+...
T Consensus 96 ~~p~v~vRK~~k~ 108 (187)
T PRK13810 96 GLPLLIVRKSVKD 108 (187)
T ss_pred CCCEEEEecCCCc
Confidence 9999999998653
No 162
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A ....
Probab=47.08 E-value=33 Score=42.22 Aligned_cols=90 Identities=17% Similarity=0.193 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHHcCCCEEEc---cC-----C--CCCCh------HHHHHHHhHcCCEEEEec-----ccccCCCC--CC
Q psy15568 216 ESTIRDLLVSTKEANMNMLRV---WG-----G--GVYMS------DYFYETCDELGILIWQDM-----MFACNNYP--AT 272 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~iR~---wg-----g--g~~~~------~~fydlcDe~GIlVw~e~-----~~~~~~~~--~~ 272 (1231)
..+++++|++||++|+|+.|+ |. | |..-. +.+.+.|-+.||-.+..+ |.+...+- .+
T Consensus 57 y~~y~eDi~l~~~lg~~~yRfsi~W~Ri~P~g~~g~~n~~~~~~Y~~~i~~l~~~gi~P~vtL~H~~~P~~l~~~ggw~~ 136 (455)
T PF00232_consen 57 YHRYKEDIALMKELGVNAYRFSISWSRIFPDGFEGKVNEEGLDFYRDLIDELLENGIEPIVTLYHFDLPLWLEDYGGWLN 136 (455)
T ss_dssp HHHHHHHHHHHHHHT-SEEEEE--HHHHSTTSSSSSS-HHHHHHHHHHHHHHHHTT-EEEEEEESS--BHHHHHHTGGGS
T ss_pred hhhhhHHHHHHHhhccceeeeecchhheeecccccccCHhHhhhhHHHHHHHHhhccceeeeeeecccccceeecccccC
Confidence 368999999999999999996 10 1 11111 467788899999988765 33221111 24
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 273 PTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 273 ~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
+++.+...+-++..++++... |-.|..-||...
T Consensus 137 ~~~~~~F~~Ya~~~~~~~gd~--V~~w~T~NEp~~ 169 (455)
T PF00232_consen 137 RETVDWFARYAEFVFERFGDR--VKYWITFNEPNV 169 (455)
T ss_dssp THHHHHHHHHHHHHHHHHTTT--BSEEEEEETHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCC--cceEEeccccce
Confidence 667777888888999999865 778999999854
No 163
>PLN02814 beta-glucosidase
Probab=45.76 E-value=62 Score=40.38 Aligned_cols=90 Identities=13% Similarity=0.248 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHHHcCCCEEEc---c------CCCCCCh------HHHHHHHhHcCCEEEEec-----ccccCC-CC--CC
Q psy15568 216 ESTIRDLLVSTKEANMNMLRV---W------GGGVYMS------DYFYETCDELGILIWQDM-----MFACNN-YP--AT 272 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~iR~---w------ggg~~~~------~~fydlcDe~GIlVw~e~-----~~~~~~-~~--~~ 272 (1231)
..++++++++||++|+|+.|+ | |-|..-. +.+.+.|-+.||-.+.-+ |.+-.. |- .+
T Consensus 76 Yhry~EDI~L~k~lG~~ayRfSIsWsRI~P~G~g~~N~~Gl~fY~~lId~l~~~GI~P~VTL~H~dlP~~L~~~yGGW~n 155 (504)
T PLN02814 76 YHKYKEDVKLMAEMGLESFRFSISWSRLIPNGRGLINPKGLLFYKNLIKELRSHGIEPHVTLYHYDLPQSLEDEYGGWIN 155 (504)
T ss_pred HHhhHHHHHHHHHcCCCEEEEeccHhhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEecCCCCCHHHHHhcCCcCC
Confidence 378999999999999999997 1 2111111 467789999999766543 433211 11 24
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 273 PTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 273 ~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
++..+...+-++.+++++... |=.|..-||...
T Consensus 156 ~~~i~~F~~YA~~~f~~fgdr--Vk~WiT~NEP~~ 188 (504)
T PLN02814 156 RKIIEDFTAFADVCFREFGED--VKLWTTINEATI 188 (504)
T ss_pred hhHHHHHHHHHHHHHHHhCCc--CCEEEeccccch
Confidence 556666677777888888764 578999999843
No 164
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=44.32 E-value=75 Score=32.21 Aligned_cols=19 Identities=11% Similarity=0.253 Sum_probs=15.1
Q ss_pred CHHHHHHHHHHHHHHHHHh
Q psy15568 272 TPTFLQSVRSEISQTVRRV 290 (1231)
Q Consensus 272 ~~~~~~~~~~e~~~~i~r~ 290 (1231)
+..+.+.+.+++++.++++
T Consensus 105 ns~Y~e~~~~~i~Ei~~~y 123 (132)
T PF14871_consen 105 NSPYREFLLEQIREILDRY 123 (132)
T ss_pred CccHHHHHHHHHHHHHHcC
Confidence 3457788888888888877
No 165
>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family. This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.
Probab=44.28 E-value=43 Score=36.02 Aligned_cols=34 Identities=21% Similarity=0.136 Sum_probs=29.9
Q ss_pred CCcEEEecCCChhhhHHHHHHhhCCcEEEEeccc
Q psy15568 636 KNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQ 669 (1231)
Q Consensus 636 ~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r 669 (1231)
+..+||+++.|+...|..+|..|++++.+..|.+
T Consensus 58 ~~d~Ivgi~~gGi~~A~~la~~L~~~~i~~~k~~ 91 (187)
T TIGR01367 58 KVDFIVGPAMGGVILGYEVARQLSVRSIFAEREG 91 (187)
T ss_pred CCCEEEEEccCcHHHHHHHHHHhCCCeEEEEEeC
Confidence 5679999999999999999999999987776543
No 166
>TIGR01090 apt adenine phosphoribosyltransferase. A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.
Probab=42.99 E-value=42 Score=35.34 Aligned_cols=45 Identities=13% Similarity=0.165 Sum_probs=34.2
Q ss_pred HHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEeccc
Q psy15568 625 LQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQ 669 (1231)
Q Consensus 625 ~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r 669 (1231)
++.|.+.+.+.+..+|++|+.+|...|..+|+.|+.++.++.|.+
T Consensus 35 ~~~la~~i~~~~~d~ivgi~~~G~~~A~~la~~L~~~~~~i~k~~ 79 (169)
T TIGR01090 35 IDLLVERYKDANIDYIVGPEARGFIFGAALAYKLGVGFVPVRKPG 79 (169)
T ss_pred HHHHHHHhccCCCCEEEeehhccHHHHHHHHHHHCCCEEEEEeCC
Confidence 344433332334579999999999999999999999998876654
No 167
>PLN02998 beta-glucosidase
Probab=42.92 E-value=64 Score=40.21 Aligned_cols=90 Identities=12% Similarity=0.244 Sum_probs=61.2
Q ss_pred hHHHHHHHHHHHHcCCCEEEc---c------CCCCCCh------HHHHHHHhHcCCEEEEec-----ccccCC-CC--CC
Q psy15568 216 ESTIRDLLVSTKEANMNMLRV---W------GGGVYMS------DYFYETCDELGILIWQDM-----MFACNN-YP--AT 272 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~iR~---w------ggg~~~~------~~fydlcDe~GIlVw~e~-----~~~~~~-~~--~~ 272 (1231)
..++++++++||++|+|+.|+ | |.|..-. +.+.+.|-+.||-.+.-+ |.+-.. |. .+
T Consensus 81 Yhry~EDi~lmk~lG~~~YRfSIsWsRI~P~G~g~vN~~gl~~Y~~lid~L~~~GIeP~VTL~H~dlP~~L~~~yGGW~n 160 (497)
T PLN02998 81 YHKYKEDVKLMADMGLEAYRFSISWSRLLPSGRGPINPKGLQYYNNLIDELITHGIQPHVTLHHFDLPQALEDEYGGWLS 160 (497)
T ss_pred HHhhHHHHHHHHHcCCCeEEeeccHHhcCcCCCCCcCHHHHHHHHHHHHHHHHcCCceEEEecCCCCCHHHHHhhCCcCC
Confidence 478999999999999999997 1 1111111 467789999999766543 433211 11 23
Q ss_pred HHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 273 PTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 273 ~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
++..+...+-++-.++++... |=.|..-||...
T Consensus 161 ~~~v~~F~~YA~~~~~~fgdr--Vk~WiT~NEP~~ 193 (497)
T PLN02998 161 QEIVRDFTAYADTCFKEFGDR--VSHWTTINEVNV 193 (497)
T ss_pred chHHHHHHHHHHHHHHHhcCc--CCEEEEccCcch
Confidence 455566666777888888764 568999999843
No 168
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]
Probab=41.12 E-value=1.3e+02 Score=36.89 Aligned_cols=90 Identities=14% Similarity=0.201 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHcCCCEEEc---------cCCCCCCh-------HHHHHHHhHcCCEEEEec-----ccccCCC-C--C
Q psy15568 216 ESTIRDLLVSTKEANMNMLRV---------WGGGVYMS-------DYFYETCDELGILIWQDM-----MFACNNY-P--A 271 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~iR~---------wggg~~~~-------~~fydlcDe~GIlVw~e~-----~~~~~~~-~--~ 271 (1231)
..+|+.++++||+||+|+.|+ .|++-.+. +..+|.|-++||-.+.-+ |.+-... . .
T Consensus 58 YhrYkeDi~L~~emG~~~~R~SI~WsRIfP~g~~~e~N~~gl~fY~~l~del~~~gIep~vTL~Hfd~P~~L~~~ygGW~ 137 (460)
T COG2723 58 YHRYKEDIALAKEMGLNAFRTSIEWSRIFPNGDGGEVNEKGLRFYDRLFDELKARGIEPFVTLYHFDLPLWLQKPYGGWE 137 (460)
T ss_pred hhhhHHHHHHHHHcCCCEEEeeeeEEEeecCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecccCCcHHHhhccCCcc
Confidence 368999999999999999996 12321122 567789999999988765 3322211 1 2
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 272 TPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 272 ~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
+..-.+...+-++...+|+..- |=.|..-||...
T Consensus 138 nR~~i~~F~~ya~~vf~~f~dk--Vk~W~TFNE~n~ 171 (460)
T COG2723 138 NRETVDAFARYAATVFERFGDK--VKYWFTFNEPNV 171 (460)
T ss_pred CHHHHHHHHHHHHHHHHHhcCc--ceEEEEecchhh
Confidence 3344455555566777777642 556777788743
No 169
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed
Probab=41.02 E-value=1e+02 Score=38.32 Aligned_cols=89 Identities=13% Similarity=0.223 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHHcCCCEEEc---c------C-CCCC-Ch-----HHHHHHHhHcCCEEEEec-----ccccC-CCC--C
Q psy15568 216 ESTIRDLLVSTKEANMNMLRV---W------G-GGVY-MS-----DYFYETCDELGILIWQDM-----MFACN-NYP--A 271 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~iR~---w------g-gg~~-~~-----~~fydlcDe~GIlVw~e~-----~~~~~-~~~--~ 271 (1231)
..+++.++++||++|+|+.|+ | | ++.. +. +.+.+.|-+.||-.+.-+ |.+-. .|- .
T Consensus 72 Yhry~eDi~Lm~~lG~~aYRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lId~L~~~GI~P~VTL~H~dlP~~L~~~~GGW~ 151 (478)
T PRK09593 72 YHHYKEDIALFAEMGFKTYRMSIAWTRIFPKGDELEPNEAGLQFYEDIFKECHKYGIEPLVTITHFDCPMHLIEEYGGWR 151 (478)
T ss_pred HHhhHHHHHHHHHcCCCEEEEecchhhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecccCCCHHHHhhcCCCC
Confidence 479999999999999999996 2 1 1111 11 466788999999776554 43321 111 2
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCceeEEeccccCCc
Q psy15568 272 TPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEME 306 (1231)
Q Consensus 272 ~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~ 306 (1231)
+++..+...+-++-.++++... |=.|..-||..
T Consensus 152 n~~~v~~F~~YA~~~~~~fgdr--Vk~WiT~NEP~ 184 (478)
T PRK09593 152 NRKMVGFYERLCRTLFTRYKGL--VKYWLTFNEIN 184 (478)
T ss_pred ChHHHHHHHHHHHHHHHHhcCc--CCEEEeecchh
Confidence 3455566666777888888764 56899899973
No 170
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed
Probab=40.65 E-value=99 Score=38.37 Aligned_cols=90 Identities=14% Similarity=0.248 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHHHcCCCEEEc---c------C-CCC-CCh-----HHHHHHHhHcCCEEEEec-----ccccCC-CC--C
Q psy15568 216 ESTIRDLLVSTKEANMNMLRV---W------G-GGV-YMS-----DYFYETCDELGILIWQDM-----MFACNN-YP--A 271 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~iR~---w------g-gg~-~~~-----~~fydlcDe~GIlVw~e~-----~~~~~~-~~--~ 271 (1231)
..++++++++||++|+|+.|+ | | ++. .+. +.+.+.|-+.||-.+.-+ |.+-.. |- .
T Consensus 66 Yhry~eDi~Lm~~lG~~~yRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~L~~~GI~P~VTL~H~dlP~~L~~~yGGW~ 145 (476)
T PRK09589 66 YHRYKEDIALFAEMGFKCFRTSIAWTRIFPQGDELEPNEEGLQFYDDLFDECLKQGIEPVVTLSHFEMPYHLVTEYGGWR 145 (476)
T ss_pred HHhhHHHHHHHHHcCCCEEEeccchhhcCcCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCCHHHHHhcCCcC
Confidence 378999999999999999996 2 1 111 111 466788999999776554 432211 11 2
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCceeEEeccccCCcc
Q psy15568 272 TPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEA 307 (1231)
Q Consensus 272 ~~~~~~~~~~e~~~~i~r~rnHPSii~W~~~NE~~~ 307 (1231)
+++..+...+-++..++++... |=.|..-||...
T Consensus 146 n~~~i~~F~~YA~~~f~~fgdr--Vk~WiT~NEp~~ 179 (476)
T PRK09589 146 NRKLIDFFVRFAEVVFTRYKDK--VKYWMTFNEINN 179 (476)
T ss_pred ChHHHHHHHHHHHHHHHHhcCC--CCEEEEecchhh
Confidence 3455666667777888888754 568999999843
No 171
>PF03659 Glyco_hydro_71: Glycosyl hydrolase family 71 ; InterPro: IPR005197 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,3-glucanases belonging to glycoside hydrolase family 71 (GH71 from CAZY).
Probab=38.89 E-value=1.2e+02 Score=36.55 Aligned_cols=76 Identities=8% Similarity=0.143 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHHHcCCCEE--EccCC-CCCCh--HHHHHHHhHcCCEEEEecccccCCCCCCHHHHHHHHHHHHHHHHHh
Q psy15568 216 ESTIRDLLVSTKEANMNML--RVWGG-GVYMS--DYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRV 290 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~i--R~wgg-g~~~~--~~fydlcDe~GIlVw~e~~~~~~~~~~~~~~~~~~~~e~~~~i~r~ 290 (1231)
.+.++.+|++++++|+... -+... ..++. ...|++|++.|+-+.--|-+... ...+. +++..+|+++
T Consensus 16 ~~dw~~di~~A~~~GIDgFaLNig~~d~~~~~~l~~a~~AA~~~gFKlf~SfD~~~~--~~~~~------~~~~~~i~~y 87 (386)
T PF03659_consen 16 QEDWEADIRLAQAAGIDGFALNIGSSDSWQPDQLADAYQAAEAVGFKLFFSFDMNSL--GPWSQ------DELIALIKKY 87 (386)
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccCCcccHHHHHHHHHHHHhcCCEEEEEecccCC--CCCCH------HHHHHHHHHH
Confidence 4899999999999999864 33211 12222 48899999999776655432111 11111 7788999999
Q ss_pred CCCceeEEe
Q psy15568 291 QHHPCIAVW 299 (1231)
Q Consensus 291 rnHPSii~W 299 (1231)
.+||+-.-+
T Consensus 88 ~~~pa~~~~ 96 (386)
T PF03659_consen 88 AGHPAYFRY 96 (386)
T ss_pred cCChhHEeE
Confidence 999998874
No 172
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=38.76 E-value=69 Score=34.60 Aligned_cols=48 Identities=10% Similarity=0.026 Sum_probs=36.7
Q ss_pred hHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 623 FLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 623 ~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
.+++.+.+.+.+.+--+|++|+.++.--|..+|..|++|++++.|...
T Consensus 37 ~v~~~l~~~~~~~~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~vRK~~k 84 (191)
T TIGR01744 37 EVGEEFARRFADDGITKIVTIEASGIAPAIMTGLKLGVPVVFARKKKP 84 (191)
T ss_pred HHHHHHHHHhccCCCCEEEEEccccHHHHHHHHHHHCCCEEEEEeCCC
Confidence 344444443323334578999999999999999999999999998864
No 173
>PRK06031 phosphoribosyltransferase; Provisional
Probab=38.35 E-value=2e+02 Score=32.14 Aligned_cols=63 Identities=21% Similarity=0.267 Sum_probs=45.9
Q ss_pred CCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhhcceeEEecCCCCchhHHHHHHhhccccccc
Q psy15568 855 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDYDGNWKMLHYFARKFFAPVLIS 921 (1231)
Q Consensus 855 ~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~~t~GsliDy~GrwK~lhY~akr~~aPvlV~ 921 (1231)
..|+-++++||...++.+...+.++++..|++ ....+++++-..+|+..-+.....+...++.
T Consensus 152 ~~GkrVLIVDDVitTG~Tl~aa~~lL~~~Ga~----Vvgv~v~v~~g~~~~~~l~~~~~~~~~~~~~ 214 (233)
T PRK06031 152 LEGRRVALIDDVISSGASIVAGLRLLAACGIE----PAGIGAAMLQSERWRESLAAAGPQWPARVVG 214 (233)
T ss_pred CCCCEEEEEEeEccccHHHHHHHHHHHHcCCe----EEEEEEEEEccccHHHHHHhcCCCcccceEE
Confidence 45778999999999999999999999877764 3344677887777776665555544444433
No 174
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=38.31 E-value=61 Score=34.95 Aligned_cols=46 Identities=11% Similarity=0.021 Sum_probs=35.1
Q ss_pred HHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 625 LQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 625 ~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
++.+.+.+.+.+--+|++|+.++.-.|..+|..|++|++++.|...
T Consensus 39 ~~~la~~~~~~~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK~~k 84 (189)
T PRK09219 39 GKEFARRFKDEGITKILTIEASGIAPAVMAALALGVPVVFAKKKKS 84 (189)
T ss_pred HHHHHHHhccCCCCEEEEEccccHHHHHHHHHHHCCCEEEEEECCC
Confidence 3334333323334589999999999999999999999999988753
No 175
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=37.42 E-value=52 Score=38.39 Aligned_cols=44 Identities=25% Similarity=0.474 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHHcCCCEE----EccCCCCCCh----------------------HHHHHHHhHcCCEEE
Q psy15568 216 ESTIRDLLVSTKEANMNML----RVWGGGVYMS----------------------DYFYETCDELGILIW 259 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~i----R~wggg~~~~----------------------~~fydlcDe~GIlVw 259 (1231)
.+.+++.|+.++++|||+| |..|-..|++ ..+.+.|.+.||-|-
T Consensus 18 ~~~~~~~l~~l~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevH 87 (311)
T PF02638_consen 18 KEQIDEMLDDLKSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVH 87 (311)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEeCcEEEecccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEE
Confidence 4899999999999999997 5444333332 366777777777764
No 176
>KOG0814|consensus
Probab=34.56 E-value=31 Score=36.18 Aligned_cols=44 Identities=32% Similarity=0.475 Sum_probs=38.3
Q ss_pred eeccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEEEecC
Q psy15568 1117 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGL 1163 (1231)
Q Consensus 1117 ~~~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~th~~ 1163 (1231)
.+.||++.+.++|||-+..|- .+-++.+++.|.+-+|++-||--
T Consensus 24 Yll~d~~~~~AviIDPV~et~---~RD~qlikdLgl~LiYa~NTH~H 67 (237)
T KOG0814|consen 24 YLLGDHKTGKAVIIDPVLETV---SRDAQLIKDLGLDLIYALNTHVH 67 (237)
T ss_pred EEeeeCCCCceEEecchhhcc---cchHHHHHhcCceeeeeecceee
Confidence 588999999999999999764 56678888999999999999953
No 177
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=33.01 E-value=1.8e+02 Score=30.70 Aligned_cols=49 Identities=14% Similarity=0.084 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHcCCCEEEccCC--CCC-Ch-------------HHHHHHHhHcCCEEEEeccc
Q psy15568 216 ESTIRDLLVSTKEANMNMLRVWGG--GVY-MS-------------DYFYETCDELGILIWQDMMF 264 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~iR~wgg--g~~-~~-------------~~fydlcDe~GIlVw~e~~~ 264 (1231)
.+.+++.++.++.+|...+++|.| ... +. ....+.|.+.|+.+-.|...
T Consensus 70 ~~~~~~~i~~a~~lg~~~i~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 134 (213)
T PF01261_consen 70 LEYLKKAIDLAKRLGAKYIVVHSGRYPSGPEDDTEENWERLAENLRELAEIAEEYGVRIALENHP 134 (213)
T ss_dssp HHHHHHHHHHHHHHTBSEEEEECTTESSSTTSSHHHHHHHHHHHHHHHHHHHHHHTSEEEEE-SS
T ss_pred HHHHHHHHHHHHHhCCCceeecCcccccccCCCHHHHHHHHHHHHHHHHhhhhhhcceEEEeccc
Confidence 368899999999999999999977 222 11 46677888889999988644
No 178
>cd00019 AP2Ec AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-hexulose 3-phosphate to D-fructose 6-phosphate, via cleaving the phosphoesterbond with the sugar.
Probab=32.29 E-value=1.2e+02 Score=34.56 Aligned_cols=79 Identities=13% Similarity=0.294 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHcCCCEEEccCCCCCC---h--------H---HHHHHHhHcCCEEEEecccccC-CCCCCHHHHHHHHH
Q psy15568 217 STIRDLLVSTKEANMNMLRVWGGGVYM---S--------D---YFYETCDELGILIWQDMMFACN-NYPATPTFLQSVRS 281 (1231)
Q Consensus 217 ~~~~~~l~~~k~~g~N~iR~wggg~~~---~--------~---~fydlcDe~GIlVw~e~~~~~~-~~~~~~~~~~~~~~ 281 (1231)
+.+++.++.++++|.+++++|.|. ++ . + ...++|.+.||.+-.|...+.. .+..+ -.
T Consensus 85 ~~~~~~i~~A~~lG~~~v~~~~g~-~~~~~~~~~~~~~~~~l~~l~~~a~~~gi~l~lEn~~~~~~~~~~t-------~~ 156 (279)
T cd00019 85 ERLKDEIERCEELGIRLLVFHPGS-YLGQSKEEGLKRVIEALNELIDKAETKGVVIALETMAGQGNEIGSS-------FE 156 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEECCCC-CCCCCHHHHHHHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCCCCC-------HH
Confidence 567899999999999999999874 43 1 2 3345556789999999754331 11222 22
Q ss_pred HHHHHHHHhCCCcee-EEecccc
Q psy15568 282 EISQTVRRVQHHPCI-AVWAGNN 303 (1231)
Q Consensus 282 e~~~~i~r~rnHPSi-i~W~~~N 303 (1231)
++.++++.+..||.+ +.|-.+|
T Consensus 157 ~~~~li~~v~~~~~~g~~lD~~h 179 (279)
T cd00019 157 ELKEIIDLIKEKPRVGVCIDTCH 179 (279)
T ss_pred HHHHHHHhcCCCCCeEEEEEhhh
Confidence 334666666568877 5555554
No 179
>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=31.81 E-value=1.6e+02 Score=31.14 Aligned_cols=77 Identities=12% Similarity=0.157 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHcCCCEEEccCCCCCCh--------HHHHHHHhHcCCEEEEecccccCCCCCCHHHHHHHHHHHHHHHH
Q psy15568 217 STIRDLLVSTKEANMNMLRVWGGGVYMS--------DYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVR 288 (1231)
Q Consensus 217 ~~~~~~l~~~k~~g~N~iR~wggg~~~~--------~~fydlcDe~GIlVw~e~~~~~~~~~~~~~~~~~~~~e~~~~i~ 288 (1231)
..+..+|+.+|+.|.+.|=+ -.+. +.+.+++.+.||. |.-+|+.-..-|+- +.+.+-+.+...
T Consensus 58 RdL~~DL~~Lk~~G~~~Vvt----l~~~~EL~~l~Vp~L~~~~~~~Gi~-~~h~PI~D~~aPd~----~~~~~i~~eL~~ 128 (168)
T PF05706_consen 58 RDLQADLERLKDWGAQDVVT----LLTDHELARLGVPDLGEAAQARGIA-WHHLPIPDGSAPDF----AAAWQILEELAA 128 (168)
T ss_dssp B-HHHHHHHHHHTT--EEEE-----S-HHHHHHTT-TTHHHHHHHTT-E-EEE----TTS---H----HHHHHHHHHHHH
T ss_pred chHHHHHHHHHHCCCCEEEE----eCcHHHHHHcCCccHHHHHHHcCCE-EEecCccCCCCCCH----HHHHHHHHHHHH
Confidence 57889999999999999843 2333 4688999999974 55788866555532 233344556777
Q ss_pred HhCCCceeEEeccc
Q psy15568 289 RVQHHPCIAVWAGN 302 (1231)
Q Consensus 289 r~rnHPSii~W~~~ 302 (1231)
+++|.--|++-|.|
T Consensus 129 ~L~~g~~V~vHC~G 142 (168)
T PF05706_consen 129 RLENGRKVLVHCRG 142 (168)
T ss_dssp HHHTT--EEEE-SS
T ss_pred HHHcCCEEEEECCC
Confidence 78888888888754
No 180
>KOG2836|consensus
Probab=31.39 E-value=1.7e+02 Score=29.59 Aligned_cols=79 Identities=22% Similarity=0.329 Sum_probs=51.0
Q ss_pred CCCChHHHHHHHHHHHHcCCCE-EEccCCCCCChHHHHHHHhHcCCEEEEecccccCCCCCCHHHHHHHHHHHHHHHHHh
Q psy15568 212 RSNNESTIRDLLVSTKEANMNM-LRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRV 290 (1231)
Q Consensus 212 ~~~~~~~~~~~l~~~k~~g~N~-iR~wggg~~~~~~fydlcDe~GIlVw~e~~~~~~~~~~~~~~~~~~~~e~~~~i~r~ 290 (1231)
+.++ ..+...++-+|..|.++ +|++ ++.+=-..-.+.||-|. |++|..+..|.. . .+.+.+.-...++
T Consensus 24 nPtn-aTln~fieELkKygvttvVRVC-----e~TYdt~~lek~GI~Vl-dw~f~dg~ppp~-q---vv~~w~~l~~~~f 92 (173)
T KOG2836|consen 24 NPTN-ATLNKFIEELKKYGVTTVVRVC-----EPTYDTTPLEKEGITVL-DWPFDDGAPPPN-Q---VVDDWLSLVKTKF 92 (173)
T ss_pred CCCc-hhHHHHHHHHHhcCCeEEEEec-----ccccCCchhhhcCceEe-ecccccCCCCch-H---HHHHHHHHHHHHH
Confidence 3454 78889999999999998 6885 44333344568999985 688866555443 2 2233333444577
Q ss_pred CCCc--eeEEecc
Q psy15568 291 QHHP--CIAVWAG 301 (1231)
Q Consensus 291 rnHP--Sii~W~~ 301 (1231)
+-|| ||++-|.
T Consensus 93 ~e~p~~cvavhcv 105 (173)
T KOG2836|consen 93 REEPGCCVAVHCV 105 (173)
T ss_pred hhCCCCeEEEEee
Confidence 7777 5666653
No 181
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2.7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.
Probab=30.70 E-value=40 Score=35.22 Aligned_cols=77 Identities=10% Similarity=0.219 Sum_probs=51.7
Q ss_pred HHHHHHHHhhccCcceEEEEeccccccccccCcccccccCchhHHHHhhhhCCCCCCcEEEecC-------CChhhhHHH
Q psy15568 581 VSKLLAKMMCTSGLKHIITMDLHQKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNAVIVAKN-------PGAAKKATS 653 (1231)
Q Consensus 581 ~ak~va~ll~~~g~d~vitvDlHs~~~~~~F~~p~~~l~a~~~l~~~l~~~~~~~~~~viVsPD-------~G~~kra~~ 653 (1231)
+-+--.++|+.+|+|.++.+|. +.-+.++++...+-++|.+. -.-..+||+.| .|..+-.+.
T Consensus 63 s~~ek~~~l~~~Gvd~~~~~~F---------~~~~~~ls~~~Fi~~iL~~~--l~~~~ivvG~DfrFG~~~~G~~~~L~~ 131 (157)
T PF06574_consen 63 SLEEKLELLESLGVDYVIVIPF---------TEEFANLSPEDFIEKILKEK--LNVKHIVVGEDFRFGKNRSGDVELLKE 131 (157)
T ss_dssp -HHHHHHHHHHTTESEEEEE-C---------CCHHCCS-HHHHHHHHCCCH--CTEEEEEEETT-EESGGGEEEHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecc---------hHHHHcCCHHHHHHHHHHhc--CCccEEEEccCccCCCCCCCCHHHHHH
Confidence 4466778999999999999873 32345676666666667633 12346899998 888888888
Q ss_pred HHHhhCCcEEEEecc
Q psy15568 654 YAERLRLGIAVIHGE 668 (1231)
Q Consensus 654 ~A~~L~~~~~~~~k~ 668 (1231)
+++.+|..+.++...
T Consensus 132 ~~~~~g~~v~~v~~~ 146 (157)
T PF06574_consen 132 LGKEYGFEVEVVPPV 146 (157)
T ss_dssp CTTTT-SEEEEE---
T ss_pred hcccCceEEEEECCE
Confidence 888888888887654
No 182
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Probab=30.55 E-value=1.6e+02 Score=33.64 Aligned_cols=93 Identities=18% Similarity=0.229 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHcCCCEEE--cc-----------CCCCCChH---HHHHHHhHcCCEEEEecccccC----CCCCC----
Q psy15568 217 STIRDLLVSTKEANMNMLR--VW-----------GGGVYMSD---YFYETCDELGILIWQDMMFACN----NYPAT---- 272 (1231)
Q Consensus 217 ~~~~~~l~~~k~~g~N~iR--~w-----------ggg~~~~~---~fydlcDe~GIlVw~e~~~~~~----~~~~~---- 272 (1231)
-.-+..|+.+|++|+|.|| +| |||-..-. +.-..|-.+||-|..||.+... .....
T Consensus 63 g~~qD~~~iLK~~GvNyvRlRvwndP~dsngn~yggGnnD~~k~ieiakRAk~~GmKVl~dFHYSDfwaDPakQ~kPkaW 142 (403)
T COG3867 63 GVRQDALQILKNHGVNYVRLRVWNDPYDSNGNGYGGGNNDLKKAIEIAKRAKNLGMKVLLDFHYSDFWADPAKQKKPKAW 142 (403)
T ss_pred ChHHHHHHHHHHcCcCeEEEEEecCCccCCCCccCCCcchHHHHHHHHHHHHhcCcEEEeeccchhhccChhhcCCcHHh
Confidence 3456778999999999986 44 34433323 4555667799999999954211 11111
Q ss_pred -----HHHHHHHHHHHHHHHHHhCCCceeEEe-ccccCCccCC
Q psy15568 273 -----PTFLQSVRSEISQTVRRVQHHPCIAVW-AGNNEMEAHN 309 (1231)
Q Consensus 273 -----~~~~~~~~~e~~~~i~r~rnHPSii~W-~~~NE~~~h~ 309 (1231)
++....+-+..++.+..+++---..-| -+|||....|
T Consensus 143 ~~l~fe~lk~avy~yTk~~l~~m~~eGi~pdmVQVGNEtn~gf 185 (403)
T COG3867 143 ENLNFEQLKKAVYSYTKYVLTTMKKEGILPDMVQVGNETNGGF 185 (403)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHcCCCccceEeccccCCce
Confidence 112233344445555555554444434 4899997754
No 183
>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]
Probab=30.52 E-value=1.5e+02 Score=31.50 Aligned_cols=78 Identities=23% Similarity=0.158 Sum_probs=49.3
Q ss_pred CCcEEEecCCChhhhHHHHHHhhCCcEEEEec--ccccccccccccccCCCcceeeecCCCccccccccccCCcccccee
Q psy15568 636 KNAVIVAKNPGAAKKATSYAERLRLGIAVIHG--EQKESESDEYEVDLTGRPDKVYLSGLPDRVLISHVSQIPDYKNAVI 713 (1231)
Q Consensus 636 ~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k--~r~~~~~d~~~d~~pg~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 713 (1231)
+--+||+=-..++..|+..|..||+++++++. .|.. . |.+ ..-.+|+--..-.+|+.+|
T Consensus 86 evDvVvGIa~sGvPlAtmvA~elg~elaiY~PrK~~~d----e------~~~---------~~G~iS~NFa~V~gK~cvI 146 (203)
T COG0856 86 EVDVVVGIAISGVPLATMVAYELGKELAIYHPRKHRKD----E------GAG---------KGGSISSNFASVEGKRCVI 146 (203)
T ss_pred eeEEEEEEeecCccHHHHHHHHhCCceEEEeccccccc----c------cCC---------cCceeecccccccCceEEE
Confidence 44588888888999999999999999999874 3321 0 000 0111222222334577777
Q ss_pred ecC---CCChhhhHHHHHHHhc
Q psy15568 714 VAK---NPGAAKKATSYAERLR 732 (1231)
Q Consensus 714 ~~~---~~~~~~Ea~~~v~Rlr 732 (1231)
+-. .-...+|+.++++..-
T Consensus 147 VDDvittG~Ti~E~Ie~lke~g 168 (203)
T COG0856 147 VDDVITTGSTIKETIEQLKEEG 168 (203)
T ss_pred EecccccChhHHHHHHHHHHcC
Confidence 632 3345688888888765
No 184
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=30.24 E-value=59 Score=41.31 Aligned_cols=49 Identities=24% Similarity=0.367 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHHcCCCEE-----------EccC---CCCC--------Ch--HHHHHHHhHcCCEEEEeccc
Q psy15568 216 ESTIRDLLVSTKEANMNML-----------RVWG---GGVY--------MS--DYFYETCDELGILIWQDMMF 264 (1231)
Q Consensus 216 ~~~~~~~l~~~k~~g~N~i-----------R~wg---gg~~--------~~--~~fydlcDe~GIlVw~e~~~ 264 (1231)
.+...+.|..+|++|+|+| |-|| -|.| |. .+|.|.|-++||.|+-|+-.
T Consensus 164 ~e~a~~llpYl~elG~T~IELMPv~e~p~~~sWGYq~~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~ 236 (628)
T COG0296 164 FELAIELLPYLKELGITHIELMPVAEHPGDRSWGYQGTGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVP 236 (628)
T ss_pred HHHHHHHhHHHHHhCCCEEEEcccccCCCCCCCCCCcceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecC
Confidence 4788899999999999999 6676 1112 22 38999999999999999854
No 185
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=29.23 E-value=18 Score=38.14 Aligned_cols=41 Identities=27% Similarity=0.537 Sum_probs=35.1
Q ss_pred ccCCCCCceeeechhhhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy15568 851 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 891 (1231)
Q Consensus 851 ~~g~~~g~~~~~~~~~~~~~~~~v~~sq~~qa~~~~~i~~~ 891 (1231)
+..+.+||..++++|+++++.++.++-++++.++++++.++
T Consensus 87 ld~di~grdVLiVeDIiDsG~TLs~i~~~l~~r~a~sv~i~ 127 (178)
T COG0634 87 LDEDIKGRDVLIVEDIIDSGLTLSKVRDLLKERGAKSVRIA 127 (178)
T ss_pred cccCCCCCeEEEEecccccChhHHHHHHHHHhCCCCeEEEE
Confidence 34578899999999999999999999999999998855443
No 186
>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known. It is found on proteins which are bacterial galactosidases [].; PDB: 1EUT_A 2BZD_A 1WCQ_C 2BER_A 1W8O_A 1EUU_A 1W8N_A.
Probab=28.69 E-value=3.8e+02 Score=24.08 Aligned_cols=70 Identities=14% Similarity=0.183 Sum_probs=30.7
Q ss_pred EEEEEEEEEeccccceeEEEEEEEEEeCCcceEEeeeeeeecCCCc-eEEEEEEEecCCCcccCCCCCCCCCCcEEEEEE
Q psy15568 72 HLSVRVILEAGLSQAVVKAKLTAELAVGKKPLRVDSLVNAEPSHGE-IEVVSTLMVLASEVELWWPNGYGEQPLYNLQIT 150 (1231)
Q Consensus 72 ~v~v~v~l~n~~~~~~~~~~l~~~i~~~~~~~~~~~~~~v~~~~g~-~~~~~~~~i~~~~p~LWwP~g~G~P~LY~l~v~ 150 (1231)
.+.+++.+.|.+..+.....+++.. +.+=...........+.+|+ ..+.+.+.++ .+. .|--|.++++
T Consensus 6 ~~~~~~tv~N~g~~~~~~v~~~l~~-P~GW~~~~~~~~~~~l~pG~s~~~~~~V~vp-~~a---------~~G~y~v~~~ 74 (78)
T PF10633_consen 6 TVTVTLTVTNTGTAPLTNVSLSLSL-PEGWTVSASPASVPSLPPGESVTVTFTVTVP-ADA---------APGTYTVTVT 74 (78)
T ss_dssp EEEEEEEEE--SSS-BSS-EEEEE---TTSE---EEEEE--B-TTSEEEEEEEEEE--TT-----------SEEEEEEEE
T ss_pred EEEEEEEEEECCCCceeeEEEEEeC-CCCccccCCccccccCCCCCEEEEEEEEECC-CCC---------CCceEEEEEE
Confidence 5677778888776542345666665 33211111111123677886 4555556653 222 3446888887
Q ss_pred EE
Q psy15568 151 LA 152 (1231)
Q Consensus 151 l~ 152 (1231)
+.
T Consensus 75 a~ 76 (78)
T PF10633_consen 75 AR 76 (78)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 187
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=28.11 E-value=1e+02 Score=31.09 Aligned_cols=37 Identities=24% Similarity=0.360 Sum_probs=33.5
Q ss_pred ccCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1119 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1119 ~~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
.++++||+++|| -+|++-..++..|.+.|+++|+++.
T Consensus 7 ~~~l~~~~vlvi----GaGg~ar~v~~~L~~~g~~~i~i~n 43 (135)
T PF01488_consen 7 FGDLKGKRVLVI----GAGGAARAVAAALAALGAKEITIVN 43 (135)
T ss_dssp HSTGTTSEEEEE----SSSHHHHHHHHHHHHTTSSEEEEEE
T ss_pred cCCcCCCEEEEE----CCHHHHHHHHHHHHHcCCCEEEEEE
Confidence 568999999985 6899999999999999999999886
No 188
>TIGR00542 hxl6Piso_put hexulose-6-phosphate isomerase, putative. This family is conserved at better than 40 % identity among the four known examples from three species: Escherichia coli (SgbU and SgaU), Haemophilus influenzae, and Mycoplasma pneumoniae. The rarity of the family, high level of conservation, and proposed catabolic role suggests lateral transfer may be a part of the evolutionary history of this protein.
Probab=27.58 E-value=2.3e+02 Score=32.14 Aligned_cols=77 Identities=13% Similarity=0.154 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHcCCCEEEccCCCCC-Ch-------------HHHHHHHhHcCCEEEEecccccCCCCCCHHHHHHHHHH
Q psy15568 217 STIRDLLVSTKEANMNMLRVWGGGVY-MS-------------DYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSE 282 (1231)
Q Consensus 217 ~~~~~~l~~~k~~g~N~iR~wggg~~-~~-------------~~fydlcDe~GIlVw~e~~~~~~~~~~~~~~~~~~~~e 282 (1231)
+.+++.++.++++|.+.|+++|+... .. ...-++|.++||.+--|... . .|.... .+
T Consensus 94 ~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~A~~~Gv~l~lE~~~-~-------~~~~t~-~~ 164 (279)
T TIGR00542 94 EIMEKAIQLARDLGIRTIQLAGYDVYYEEHDEETRRRFREGLKEAVELAARAQVTLAVEIMD-T-------PFMSSI-SK 164 (279)
T ss_pred HHHHHHHHHHHHhCCCEEEecCcccccCcCCHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCC-C-------chhcCH-HH
Confidence 45789999999999999999865321 11 24567888999999888531 1 122222 23
Q ss_pred HHHHHHHhCCCceeE-Eecccc
Q psy15568 283 ISQTVRRVQHHPCIA-VWAGNN 303 (1231)
Q Consensus 283 ~~~~i~r~rnHPSii-~W~~~N 303 (1231)
+.++++.+ +||.+- .|..+|
T Consensus 165 ~~~li~~v-~~~~v~~~~D~~h 185 (279)
T TIGR00542 165 WLKWDHYL-NSPWFTLYPDIGN 185 (279)
T ss_pred HHHHHHHc-CCCceEEEeCcCh
Confidence 44556555 677664 344444
No 189
>PRK09213 pur operon repressor; Provisional
Probab=27.05 E-value=1.1e+02 Score=34.90 Aligned_cols=35 Identities=14% Similarity=0.194 Sum_probs=31.0
Q ss_pred CCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 636 KNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 636 ~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
+--+|++|..+|...|..+|..|++|++++.|+..
T Consensus 130 ~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK~~K 164 (271)
T PRK09213 130 KIDAVMTVETKGIPLAYAVANYLNVPFVIVRRDSK 164 (271)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEEECCC
Confidence 33589999999999999999999999999988653
No 190
>TIGR03234 OH-pyruv-isom hydroxypyruvate isomerase. This enzyme interconverts tartronate semi-aldehyde (TSA, aka 2-hydroxy 3-oxopropionate) and hydroxypyruvate. The E. coli enzyme has been characterized and found to be specific for TSA, contain no cofactors, and have a rather high Km for hydroxypyruvate of 12.5 mM. The gene is ofter found in association with glyoxalate carboligase (which produces TSA), but has been shown to have no effect on growth on glyoxalate when knocked out. This is consistent with the fact that the gene for tartronate semialdehyde reductase (glxR) is also associated and may have primary responsibility for the catabolism of TSA.
Probab=26.94 E-value=2.2e+02 Score=31.66 Aligned_cols=81 Identities=10% Similarity=0.168 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHcCCCEEEccCCCCCCh--------------HHHHHHHhHcCCEEEEecccccCCCCCCHHHHHHHHHH
Q psy15568 217 STIRDLLVSTKEANMNMLRVWGGGVYMS--------------DYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSE 282 (1231)
Q Consensus 217 ~~~~~~l~~~k~~g~N~iR~wggg~~~~--------------~~fydlcDe~GIlVw~e~~~~~~~~~~~~~~~~~~~~e 282 (1231)
+.+++.++.++++|...||++.|..... ...-++|.+.||.+..|..... ..+.. +... -++
T Consensus 84 ~~~~~~i~~a~~lg~~~i~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~A~~~gi~l~lE~~~~~-~~~~~--~l~t-~~~ 159 (254)
T TIGR03234 84 EGVALAIAYARALGCPQVNCLAGKRPAGVSPEEARATLVENLRYAADALDRIGLTLLIEPINSF-DMPGF--FLTT-TEQ 159 (254)
T ss_pred HHHHHHHHHHHHhCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEECCcc-cCCCC--hhcC-HHH
Confidence 5677899999999999999987754211 2335668889999988853110 11111 2211 234
Q ss_pred HHHHHHHhCCCcee-EEeccc
Q psy15568 283 ISQTVRRVQHHPCI-AVWAGN 302 (1231)
Q Consensus 283 ~~~~i~r~rnHPSi-i~W~~~ 302 (1231)
+.+++++.. ||.+ +.|..+
T Consensus 160 ~~~li~~v~-~~~~~i~~D~~ 179 (254)
T TIGR03234 160 ALAVIDDVG-RENLKLQYDLY 179 (254)
T ss_pred HHHHHHHhC-CCCEeEeeehh
Confidence 456666654 6665 555444
No 191
>cd04814 PA_M28_1 PA_M28_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1. A subfamily of PA-domain containing proteins belonging to the peptidase family M28. Family M28 contains aminopeptidases and carboxypeptidases, and has co-catalytic zinc ions. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following members of the peptidase family M28: i) prostate-specific membrane antigen (PSMA), ii) yeast aminopeptidase Y, and ii) human TfR (transferrin receptor)1 and human TfR2. The proteins listed above belong to other subfamilies, relatively little is known a
Probab=26.84 E-value=91 Score=32.08 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=31.9
Q ss_pred CCCCCEEEEEecccCc-------HH-------HHHHHHHHHHhcCCCeEEEEEEec
Q psy15568 1121 DVGGRVAIMVDDMVDD-------VH-------SFVAAAEVLKDRGAYKIYVLATHG 1162 (1231)
Q Consensus 1121 ~v~gk~~iivDDii~t-------G~-------T~~~~~~~l~~~ga~~v~~~~th~ 1162 (1231)
||+||.|||..+.++. |+ ++..=++.+.++||.-|+++.+-.
T Consensus 45 DVkGKIVlv~~g~P~~~~~~~~~~~~~~~~~~~~~~K~~~A~~~GA~gvIii~~~~ 100 (142)
T cd04814 45 DVKGKVVVVLRNDPQGEPGAGDFGGKAMTYYGRWTYKYEEAARHGAAGVLIVHELA 100 (142)
T ss_pred CCCCcEEEEEcCCCCcccccccccccccccccCHHHHHHHHHHCCCcEEEEEeCCC
Confidence 8999999998775521 11 566678889999999998887443
No 192
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=26.74 E-value=1.2e+02 Score=34.73 Aligned_cols=35 Identities=11% Similarity=0.171 Sum_probs=31.3
Q ss_pred CCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 636 KNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 636 ~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
+--+|+++..+|..-|..+|..|++|++++.|+..
T Consensus 128 ~iD~VvgvetkGIpLA~avA~~L~vp~vivRK~~K 162 (268)
T TIGR01743 128 EIDAVMTVATKGIPLAYAVASVLNVPLVIVRKDSK 162 (268)
T ss_pred CCCEEEEEccchHHHHHHHHHHHCCCEEEEEECCC
Confidence 34589999999999999999999999999988753
No 193
>PF06230 DUF1009: Protein of unknown function (DUF1009); InterPro: IPR010415 This is a family of uncharacterised bacterial proteins.
Probab=25.99 E-value=90 Score=34.37 Aligned_cols=39 Identities=26% Similarity=0.279 Sum_probs=34.0
Q ss_pred HHHHHHHHcCCCEEEccCCCCC--ChHHHHHHHhHcCCEEE
Q psy15568 221 DLLVSTKEANMNMLRVWGGGVY--MSDYFYETCDELGILIW 259 (1231)
Q Consensus 221 ~~l~~~k~~g~N~iR~wggg~~--~~~~fydlcDe~GIlVw 259 (1231)
+-++.|+++|+..|=+..|... ..+++.++||++||-||
T Consensus 173 ~Tv~~~~~ag~~~laveAg~tl~ld~~~~i~~Ad~~gi~i~ 213 (214)
T PF06230_consen 173 DTVENAAEAGLAGLAVEAGKTLILDREEVIALADKAGIFIV 213 (214)
T ss_pred HHHHHHHHcCCeEEEEecCcEEEecHHHHHHHHHHcCCEEe
Confidence 5689999999999998877554 56899999999999987
No 194
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=25.60 E-value=3.3e+02 Score=34.82 Aligned_cols=80 Identities=10% Similarity=0.177 Sum_probs=53.3
Q ss_pred EEEecceecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEEccCCCCCCh----HHHHHHHhHcCCEEEEecccccCCCCC
Q psy15568 196 IYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMS----DYFYETCDELGILIWQDMMFACNNYPA 271 (1231)
Q Consensus 196 vflrG~n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~wggg~~~~----~~fydlcDe~GIlVw~e~~~~~~~~~~ 271 (1231)
..+||.|-..- +..+++.++..++.+++.|+..+|+. .+... ....+.+-+.|..+..-+.+.. ..-.
T Consensus 80 mL~Rg~N~vGy-----~~~~d~vv~~~v~~a~~~Gidv~Rif--d~lnd~~n~~~~i~~~k~~G~~~~~~i~yt~-sp~~ 151 (596)
T PRK14042 80 MLLRGQNLLGY-----RNYADDVVRAFVKLAVNNGVDVFRVF--DALNDARNLKVAIDAIKSHKKHAQGAICYTT-SPVH 151 (596)
T ss_pred EEecccccccc-----ccCChHHHHHHHHHHHHcCCCEEEEc--ccCcchHHHHHHHHHHHHcCCEEEEEEEecC-CCCC
Confidence 56899987542 22334889999999999999999996 33322 4788999999998876644322 2234
Q ss_pred CHHHHHHHHHHH
Q psy15568 272 TPTFLQSVRSEI 283 (1231)
Q Consensus 272 ~~~~~~~~~~e~ 283 (1231)
+.++...+.+++
T Consensus 152 t~e~~~~~ak~l 163 (596)
T PRK14042 152 TLDNFLELGKKL 163 (596)
T ss_pred CHHHHHHHHHHH
Confidence 555544444333
No 195
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=25.12 E-value=1.7e+02 Score=33.06 Aligned_cols=59 Identities=22% Similarity=0.309 Sum_probs=45.9
Q ss_pred eeEEEecceecCCCCCCCCCCChHHHHHHHHHHHHcCCCEEEccCCCCCCh---------------HHHHHHHhHcCCEE
Q psy15568 194 VPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMS---------------DYFYETCDELGILI 258 (1231)
Q Consensus 194 ~pvflrG~n~~p~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~wggg~~~~---------------~~fydlcDe~GIlV 258 (1231)
..+++-|-|=. .++|.+...-+.+|++|.+++|- |.|-| ...-+.||+.|+.|
T Consensus 45 ~~~viAGPCsv---------Es~E~i~~~A~~vk~~Ga~~lRG---gafKPRTSPYsFQGlge~gL~~l~~a~~~~Gl~v 112 (286)
T COG2876 45 ALRVIAGPCSV---------ESEEQVRETAESVKAAGAKALRG---GAFKPRTSPYSFQGLGEEGLKLLKRAADETGLPV 112 (286)
T ss_pred ceEEEecCccc---------CCHHHHHHHHHHHHHcchhhccC---CcCCCCCCcccccccCHHHHHHHHHHHHHcCCee
Confidence 35777666543 33588889999999999999996 56632 46678899999999
Q ss_pred EEeccc
Q psy15568 259 WQDMMF 264 (1231)
Q Consensus 259 w~e~~~ 264 (1231)
..|.|-
T Consensus 113 vtEvm~ 118 (286)
T COG2876 113 VTEVMD 118 (286)
T ss_pred EEEecC
Confidence 999874
No 196
>PRK13209 L-xylulose 5-phosphate 3-epimerase; Reviewed
Probab=24.35 E-value=3.7e+02 Score=30.43 Aligned_cols=47 Identities=13% Similarity=0.249 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHcCCCEEEccCCCCCC-h-------------HHHHHHHhHcCCEEEEecc
Q psy15568 217 STIRDLLVSTKEANMNMLRVWGGGVYM-S-------------DYFYETCDELGILIWQDMM 263 (1231)
Q Consensus 217 ~~~~~~l~~~k~~g~N~iR~wggg~~~-~-------------~~fydlcDe~GIlVw~e~~ 263 (1231)
+.+++.++.++++|...|+++|+.... . ....++|.++||.+.-|..
T Consensus 99 ~~~~~~i~~a~~lG~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~A~~~GV~i~iE~~ 159 (283)
T PRK13209 99 EIMRKAIQLAQDLGIRVIQLAGYDVYYEQANNETRRRFIDGLKESVELASRASVTLAFEIM 159 (283)
T ss_pred HHHHHHHHHHHHcCCCEEEECCccccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEEeec
Confidence 457889999999999999997653211 1 2456777788999998874
No 197
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=24.15 E-value=2.3e+02 Score=30.30 Aligned_cols=35 Identities=17% Similarity=0.085 Sum_probs=31.8
Q ss_pred CCcEEEecCCChhhhHHHHHHhhCCcEEEEecccc
Q psy15568 636 KNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK 670 (1231)
Q Consensus 636 ~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~r~ 670 (1231)
+--.||++.++|.--|..+|..||+|++++.|.+.
T Consensus 53 ~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~vRK~~k 87 (179)
T COG0503 53 GIDKIVTIEARGIPLAAAVALELGVPFVPVRKKGK 87 (179)
T ss_pred CCCEEEEEccccchhHHHHHHHhCCCEEEEEecCC
Confidence 34589999999999999999999999999998765
No 198
>cd04820 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 1. A subgroup of PA-domain containing proteins belonging to the peptidase family M28. Family M28 contains aminopeptidases and carboxypeptidases, and has co-catalytic zinc ions. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following members of the peptidase family M28: i) prostate-specific membrane antigen (PSMA), ii) yeast aminopeptidase Y, and ii) human TfR (transferrin receptor)1 and human TfR2. The proteins listed above belong to other subgroups; relatively litt
Probab=23.46 E-value=1.2e+02 Score=31.12 Aligned_cols=39 Identities=23% Similarity=0.348 Sum_probs=31.2
Q ss_pred CCCCCEEEEEecccCcH--------HHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1121 DVGGRVAIMVDDMVDDV--------HSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1121 ~v~gk~~iivDDii~tG--------~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
||+||.|||........ ++...=.+.+.++||.-|+++.
T Consensus 47 DVkGKIVlv~~g~p~~~~~~~~~~~~~~~~K~~~A~~~GA~aVIi~~ 93 (137)
T cd04820 47 DVKGKIVVVLSGGPAGIPSEEGAHAHSSNEKARYAAKAGAIGMITLT 93 (137)
T ss_pred CCCCeEEEEEcCCCCccccccccccccHHHHHHHHHHCCCeEEEEEe
Confidence 89999999988776421 3466678889999999988887
No 199
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=23.14 E-value=1.5e+02 Score=28.87 Aligned_cols=45 Identities=22% Similarity=0.293 Sum_probs=35.2
Q ss_pred hhHHHHhhhhCCCCCCcEEEecCCChhhhHHHHHHhhCCcEEEEecc
Q psy15568 622 PFLLQYIQDSIPDYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGE 668 (1231)
Q Consensus 622 ~~l~~~l~~~~~~~~~~viVsPD~G~~kra~~~A~~L~~~~~~~~k~ 668 (1231)
..+++.|.+. ..+..+||++..||...|..+|..|+.+..+..+.
T Consensus 15 ~~la~~i~~~--~~~~~~ivgi~~~G~~~a~~la~~l~~~~~~~~~~ 59 (125)
T PF00156_consen 15 ERLAEQIKES--GFDFDVIVGIPRGGIPLAAALARALGIPLVFVRKR 59 (125)
T ss_dssp HHHHHHHHHH--TTTSSEEEEETTTTHHHHHHHHHHHTHEEEEEEEE
T ss_pred HHHHHHHHHh--CCCCCEEEeehhccHHHHHHHHHHhCCCccceeee
Confidence 4456667654 33445699999999999999999999998777654
No 200
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=22.95 E-value=1.2e+02 Score=28.15 Aligned_cols=33 Identities=18% Similarity=0.064 Sum_probs=27.3
Q ss_pred CCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEE
Q psy15568 1123 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 1158 (1231)
Q Consensus 1123 ~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~ 1158 (1231)
+++++|+++ ++|.....++..|++.|.++|+.+
T Consensus 55 ~~~~ivv~c---~~g~~s~~~~~~l~~~G~~~v~~l 87 (96)
T cd01529 55 RATRYVLTC---DGSLLARFAAQELLALGGKPVALL 87 (96)
T ss_pred CCCCEEEEe---CChHHHHHHHHHHHHcCCCCEEEe
Confidence 678899996 478888888999999999887554
No 201
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=22.79 E-value=1.2e+02 Score=27.58 Aligned_cols=37 Identities=19% Similarity=0.216 Sum_probs=30.2
Q ss_pred cCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1120 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1120 ~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
+.-+++++||++ .+|.....++..|++.|-+.|+.+-
T Consensus 52 ~~~~~~~iv~~c---~~g~~a~~~~~~l~~~G~~~v~~l~ 88 (100)
T smart00450 52 GLDKDKPVVVYC---RSGNRSAKAAWLLRELGFKNVYLLD 88 (100)
T ss_pred CCCCCCeEEEEe---CCCcHHHHHHHHHHHcCCCceEEec
Confidence 445789999998 6788889999999999999876543
No 202
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=22.45 E-value=68 Score=30.23 Aligned_cols=49 Identities=29% Similarity=0.262 Sum_probs=30.0
Q ss_pred cccCcHHHHHHHHHHHHhcCCCeEEEEEEecCC-CCC----hhhhhhcCCCCEEEEeC
Q psy15568 1132 DMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLL-SSD----APLLIEESPIDEVVVTN 1184 (1231)
Q Consensus 1132 Dii~tG~T~~~~~~~l~~~ga~~v~~~~th~~~-~~~----a~~~l~~~~~~~i~~t~ 1184 (1231)
.+++|++| ++.|+++|.....+.-...-- ..+ ..+.|++..|+-||.|-
T Consensus 15 ~i~AT~gT----a~~L~~~Gi~~~~v~~~~~~~~~~~g~~~i~~~i~~~~IdlVIn~~ 68 (95)
T PF02142_consen 15 EIYATEGT----AKFLKEHGIEVTEVVNKIGEGESPDGRVQIMDLIKNGKIDLVINTP 68 (95)
T ss_dssp EEEEEHHH----HHHHHHTT--EEECCEEHSTG-GGTHCHHHHHHHHTTSEEEEEEE-
T ss_pred EEEEChHH----HHHHHHcCCCceeeeeecccCccCCchhHHHHHHHcCCeEEEEEeC
Confidence 36789998 678999998844443222221 124 67888888899666553
No 203
>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.
Probab=21.37 E-value=1.3e+02 Score=26.78 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=30.2
Q ss_pred cCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCeEEEEE
Q psy15568 1120 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 1159 (1231)
Q Consensus 1120 ~~v~gk~~iivDDii~tG~T~~~~~~~l~~~ga~~v~~~~ 1159 (1231)
+.-+++.|||+++- |.....++..|++.|-.+|+.+.
T Consensus 46 ~~~~~~~vv~~c~~---~~~a~~~~~~l~~~G~~~v~~l~ 82 (89)
T cd00158 46 ELDKDKPIVVYCRS---GNRSARAAKLLRKAGGTNVYNLE 82 (89)
T ss_pred ccCCCCeEEEEeCC---CchHHHHHHHHHHhCcccEEEec
Confidence 44588999999876 77788899999999988887553
No 204
>PRK01060 endonuclease IV; Provisional
Probab=20.19 E-value=4.8e+02 Score=29.46 Aligned_cols=84 Identities=17% Similarity=0.289 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHcCCCEEEccCCCC--CCh--------HHHHHHHhHcCCE---EEEecccccCCCCCCHHHHHHHHHHHH
Q psy15568 218 TIRDLLVSTKEANMNMLRVWGGGV--YMS--------DYFYETCDELGIL---IWQDMMFACNNYPATPTFLQSVRSEIS 284 (1231)
Q Consensus 218 ~~~~~l~~~k~~g~N~iR~wggg~--~~~--------~~fydlcDe~GIl---Vw~e~~~~~~~~~~~~~~~~~~~~e~~ 284 (1231)
.+++.++.++++|+..+=+|.++. +.. ..+-++|+++||- +....|+....-..+++..+...+.++
T Consensus 13 ~~~~~l~~~~~~G~d~vEl~~~~p~~~~~~~~~~~~~~~lk~~~~~~gl~~~~~~~h~~~~~nl~~~d~~~r~~s~~~~~ 92 (281)
T PRK01060 13 GLEGAVAEAAEIGANAFMIFTGNPQQWKRKPLEELNIEAFKAACEKYGISPEDILVHAPYLINLGNPNKEILEKSRDFLI 92 (281)
T ss_pred CHHHHHHHHHHcCCCEEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCCCCceEEecceEecCCCCCHHHHHHHHHHHH
Confidence 378899999999999997765421 111 3588999999995 444444322222234555555555555
Q ss_pred HHHHH--hCCCceeEEecc
Q psy15568 285 QTVRR--VQHHPCIAVWAG 301 (1231)
Q Consensus 285 ~~i~r--~rnHPSii~W~~ 301 (1231)
+.++. .-.-|.|+++.+
T Consensus 93 ~~i~~A~~lga~~vv~h~G 111 (281)
T PRK01060 93 QEIERCAALGAKLLVFHPG 111 (281)
T ss_pred HHHHHHHHcCCCEEEEcCC
Confidence 55532 234556666654
No 205
>PRK09856 fructoselysine 3-epimerase; Provisional
Probab=20.18 E-value=3.3e+02 Score=30.65 Aligned_cols=76 Identities=12% Similarity=0.148 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHcCCCEEEccCCCCC---Ch-----------HHHHHHHhHcCCEEEEecccccCCCCCCHHHHHHHHHH
Q psy15568 217 STIRDLLVSTKEANMNMLRVWGGGVY---MS-----------DYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSE 282 (1231)
Q Consensus 217 ~~~~~~l~~~k~~g~N~iR~wggg~~---~~-----------~~fydlcDe~GIlVw~e~~~~~~~~~~~~~~~~~~~~e 282 (1231)
+.+++.++.++.+|..+|++|.|... .. ..+.++|.++||.+-.|.+.. + ...+... .++
T Consensus 90 ~~~~~~i~~a~~lGa~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~iE~~~~---~--~~~~~~t-~~~ 163 (275)
T PRK09856 90 DMIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTP---Y--ESNVVCN-AND 163 (275)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCC---C--cccccCC-HHH
Confidence 57788899999999999999875321 11 467888899999998885311 0 0011111 234
Q ss_pred HHHHHHHhCCCceeEEe
Q psy15568 283 ISQTVRRVQHHPCIAVW 299 (1231)
Q Consensus 283 ~~~~i~r~rnHPSii~W 299 (1231)
+.++++.. +||.+-+.
T Consensus 164 ~~~l~~~~-~~~~v~~~ 179 (275)
T PRK09856 164 VLHALALV-PSPRLFSM 179 (275)
T ss_pred HHHHHHHc-CCCcceeE
Confidence 45666554 67776443
Done!