RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15568
(1231 letters)
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 348
Score = 202 bits (515), Expect = 3e-58
Identities = 102/369 (27%), Positives = 154/369 (41%), Gaps = 41/369 (11%)
Query: 167 RTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVST 226
RT+ ++ + + G FYFEVN +P+++KG+N IP D L E
Sbjct: 1 RTIRVVNEK-----DKDGESFYFEVNGIPMFAKGANYIPQDALLPNVTTERYQTLFR-DM 54
Query: 227 KEANMNMLRVWGGGVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQT 286
KEANMNM+R+WGGG Y ++ FY+ DE GIL+WQD MFAC YP+ PTFL+ V +E
Sbjct: 55 KEANMNMVRIWGGGTYENNLFYDLADENGILVWQDFMFACTPYPSDPTFLKRVEAEAVYN 114
Query: 287 VRRVQHHPCIAVWAGNNEMEAH----------------NYDYYQNLWDPSTAPKSRFCSE 330
+RR+++H +A+W GNNE+ + + P + +
Sbjct: 115 IRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFD 174
Query: 331 FGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYF 390
+ + + + + E G +
Sbjct: 175 SDRFYVHSSPYLANWGRPESWGTGDSHNWGVWYGKKPFESLDTDLPRFMSEFGFQSFPEM 234
Query: 391 AYLSQCMAA----IHALHGRYATDQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLN 446
++ A I + + I M RD + + +
Sbjct: 235 KTIAAFAAPEDYQIESEVMNAHQKSSIGNSLIRTYMERDYIIPESFED-------FVYVG 287
Query: 447 DIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDVWQAPTWSSIDYDGNWKMLH 506
+ Q ++ E RR++ + MG LYWQLND W +WSSIDY GNWK LH
Sbjct: 288 LVLQGQGMRHGLEAHRRNR--------PYCMGTLYWQLNDSWPVVSWSSIDYYGNWKALH 339
Query: 507 YFARKFFAP 515
Y A++ FAP
Sbjct: 340 YQAKRAFAP 348
Score = 38.5 bits (88), Expect = 0.004
Identities = 37/214 (17%), Positives = 66/214 (30%), Gaps = 42/214 (19%)
Query: 746 ESDEYEVDLTRYIRENPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAK 805
E+ +Y ++ E + Y +L+ L V ++D R Y+ SSP
Sbjct: 135 EALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRFYVHSSPYLANWGRPES 194
Query: 806 YALAD-NPYSNIYGDSGWTGVSSPSPCPAPLLSYHG----------DGSKEKPPISVVGD 854
+ D + + YG + + + P + ++ S V +
Sbjct: 195 WGTGDSHNWGVWYGKKPFESLDTDLPRFMSEFGFQSFPEMKTIAAFAAPEDYQIESEVMN 254
Query: 855 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA----------------THGLL- 897
+ +I + + E +D + + G L
Sbjct: 255 AHQKSSIGNSLIRTYMERDYIIPESFEDFVYVGLVLQGQGMRHGLEAHRRNRPYCMGTLY 314
Query: 898 --------------FDYDGNWKMLHYFARKFFAP 917
DY GNWK LHY A++ FAP
Sbjct: 315 WQLNDSWPVVSWSSIDYYGNWKALHYQAKRAFAP 348
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 339
Score = 171 bits (434), Expect = 1e-47
Identities = 55/347 (15%), Positives = 105/347 (30%), Gaps = 36/347 (10%)
Query: 184 GRYFYFEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYM 243
GR + VN P+ +G P L NE+ D L +N +R+ G
Sbjct: 11 GRQYS--VNGKPLLIRGGGYTPDLFLR---WNETAAADKLKYVLNLGLNTVRLEGH--IE 63
Query: 244 SDYFYETCDELGILIWQDMMFA----------CNNYPATPTFLQSVRSEISQTVRRVQHH 293
D F++ D+LG+L P + ++ + R++ H
Sbjct: 64 PDEFFDIADDLGVLTMPGWECCDKWEGQVNGEEKGEPWVESDYPIAKASMFSEAERLRDH 123
Query: 294 PCIAVWAGNNEMEAHNYDYYQNL--WDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADL 351
P + + ++ + Q + + P
Sbjct: 124 PSVISFHIGSDFA-PDRRIEQGYLDAMKAADFLLPVIPAASARPSPITGASGMKMNGPYD 182
Query: 352 ASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNL-TLEYFA----YLSQCMAAIHALHGR 406
++D Q GG S +I + TL+ + + R
Sbjct: 183 YVPPVYWYDKSQKDRGGAWSFNSETSAGVDIPTMDTLKRMMSASELDTMWKNPSAKQYHR 242
Query: 407 YATDQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDIYQAGAIKTITEQMRRDKG 466
++D G +K + + + G + + + Q ++ E R+
Sbjct: 243 SSSDTFGNLKLFGDALTKRYGA-------SANLNDFVRKAQLSQYENVRAEFESHSRNYT 295
Query: 467 VLREDGSGHNMGALYWQLNDVWQAPTWSSIDYDGNWKMLHYFARKFF 513
D + + G +YW LN W + W D + +Y A+K
Sbjct: 296 ----DSTNPSTGLIYWMLNSPWTSLHWQLFDAYMDQNGAYYGAKKAN 338
Score = 33.7 bits (76), Expect = 0.13
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 892 ATHGLLFDYDGNWKMLHYFARKFF 915
+ H LFD + +Y A+K
Sbjct: 315 SLHWQLFDAYMDQNGAYYGAKKAN 338
Score = 32.6 bits (73), Expect = 0.28
Identities = 18/153 (11%), Positives = 40/153 (26%), Gaps = 11/153 (7%)
Query: 761 NPELYYKEYAELYVNTLKPIVLQYDPTRPYLTSSPTNGIESEKAKYALADNPYSNIYGDS 820
+ + + Y++ +K D P + ++ A + PY +
Sbjct: 133 SDFAPDRRIEQGYLDAMK----AADFLLPVIPAASARPSPITGASGMKMNGPYDYVPPVY 188
Query: 821 GWTGVSSPSPCPAPLLSYHGDGSKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVL 880
+ S G + + +M +D + +A +
Sbjct: 189 WYDKSQKDRGGAWSFNSETSAG-------VDIPTMDTLKRMMSASELDTMWKNPSAKQYH 241
Query: 881 KDRGAYKIYVLATHGLLFDYDGNWKMLHYFARK 913
+ + L G L+ F RK
Sbjct: 242 RSSSDTFGNLKLFGDALTKRYGASANLNDFVRK 274
>d2c4ka2 c.61.1.2 (A:167-350) PRPP synthetase-associated protein 1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 184
Score = 128 bits (323), Expect = 1e-34
Identities = 102/148 (68%), Positives = 124/148 (83%), Gaps = 5/148 (3%)
Query: 1078 PSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDV 1137
DGR SPP + T+ + +P AKEKPPI+VVGDVGGR+AI+VDD++DDV
Sbjct: 42 DMDDGRHSPPMV-----KNATVHPGLELPLMMAKEKPPITVVGDVGGRIAIIVDDIIDDV 96
Query: 1138 HSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEVVVTNTIPHDVQKLQCPK 1197
SFVAAAE+LK+RGAYKIYV+ATHG+LS++AP LIEES +DEVVVTNT+PH+VQKLQCPK
Sbjct: 97 ESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSVDEVVVTNTVPHEVQKLQCPK 156
Query: 1198 IKTVDISILLSEAIRRMHNKESMSYLFR 1225
IKTVDIS++LSEAIRR+HN ESM+YLFR
Sbjct: 157 IKTVDISLILSEAIRRIHNGESMAYLFR 184
Score = 75.6 bits (185), Expect = 4e-16
Identities = 44/80 (55%), Positives = 56/80 (70%)
Query: 970 TVKLCAAEEIQGFFDCPVDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCPKIKTVDISI 1029
+K A +I + + A + + D VVVTNT+PH+VQKLQCPKIKTVDIS+
Sbjct: 105 ILKERGAYKIYVMATHGILSAEAPRLIEESSVDEVVVTNTVPHEVQKLQCPKIKTVDISL 164
Query: 1030 LLSEAIRRMHNKESMSYLFR 1049
+LSEAIRR+HN ESM+YLFR
Sbjct: 165 ILSEAIRRIHNGESMAYLFR 184
Score = 55.9 bits (134), Expect = 3e-09
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 634 DYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDE 676
+Y+NAVIVAK+P AAK+A SYAERLRLG+AVIHGE + +E D
Sbjct: 1 NYRNAVIVAKSPDAAKRAQSYAERLRLGLAVIHGEAQCTELDM 43
Score = 55.9 bits (134), Expect = 3e-09
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 707 DYKNAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDE 749
+Y+NAVIVAK+P AAK+A SYAERLRLG+AVIHGE + +E D
Sbjct: 1 NYRNAVIVAKSPDAAKRAQSYAERLRLGLAVIHGEAQCTELDM 43
Score = 43.6 bits (102), Expect = 3e-05
Identities = 44/56 (78%), Positives = 53/56 (94%)
Query: 844 KEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFD 899
KEKPPI+VVGDVGGR+AI+VDD++DDV SFVAAAE+LK+RGAYKIYV+ATHG+L
Sbjct: 70 KEKPPITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSA 125
>d1dkua2 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate synthetase
{Bacillus subtilis [TaxId: 1423]}
Length = 149
Score = 110 bits (275), Expect = 1e-28
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Query: 1107 QHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSS 1166
+ +++VG++ G+ AI++DD++D + AA L + GA ++Y TH +LS
Sbjct: 33 RPRPNVAEVMNIVGNIEGKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTHPVLSG 92
Query: 1167 DAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAIRRMHNKESMSYLF 1224
A I S I E+VVTN+I +K + + K + + LL+EAI R+H ++S+SYLF
Sbjct: 93 PAVERINNSTIKELVVTNSIKLPEEK-KIERFKQLSVGPLLAEAIIRVHEQQSVSYLF 149
Score = 66.9 bits (163), Expect = 2e-13
Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 19/153 (12%)
Query: 902 GNWKMLHYFARKFFAPVLISPVFNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWNDTRPF 961
G A + AP+ I + R ++N I+ +
Sbjct: 10 GGVTRARKLADRLKAPIAI--IDKRRPRPNVAEVMNIVGNIEGKTAILIDD--------- 58
Query: 962 RSVKTPLVTVKLCAAEEIQGFFDC------PVDNLRASPFLLQYIQDSVVVTNTIPHDVQ 1015
+ T A G + PV + A + +VVTN+I +
Sbjct: 59 -IIDTAGTITLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIKELVVTNSIKLPEE 117
Query: 1016 KLQCPKIKTVDISILLSEAIRRMHNKESMSYLF 1048
K + + K + + LL+EAI R+H ++S+SYLF
Sbjct: 118 K-KIERFKQLSVGPLLAEAIIRVHEQQSVSYLF 149
Score = 46.9 bits (111), Expect = 1e-06
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 831 CPAPLLSYHGDGSKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYV 890
P ++ +++VG++ G+ AI++DD++D + AA L + GA ++Y
Sbjct: 24 APIAIIDKRRPRPNVAEVMNIVGNIEGKTAILIDDIIDTAGTITLAANALVENGAKEVYA 83
Query: 891 LATHGLL 897
TH +L
Sbjct: 84 CCTHPVL 90
Score = 40.7 bits (95), Expect = 2e-04
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 637 NAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQK---ESESDEYEVDLTGRP 685
+ VIV+ + G +A A+RL+ IA+I + +E ++ G+
Sbjct: 1 DIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPNVAEVMNIVGNIEGKT 52
Score = 39.2 bits (91), Expect = 6e-04
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 710 NAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQKESESDE 749
+ VIV+ + G +A A+RL+ IA+I + E
Sbjct: 1 DIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPNVAE 40
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 304
Score = 94.7 bits (234), Expect = 1e-21
Identities = 48/302 (15%), Positives = 90/302 (29%), Gaps = 14/302 (4%)
Query: 189 FEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDYFY 248
F +N P Y G N + + + + + N R +
Sbjct: 8 FLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYA--EEVM 65
Query: 249 ETCDELGILIWQDMMFACNNY--PATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEME 306
+ CD GI++ + L + + VRR ++HP + +W+ NE
Sbjct: 66 QMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPA 125
Query: 307 AHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLA 366
+H L KS S K A D+ + S H
Sbjct: 126 SHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICL--NSYYSWYHDY 183
Query: 367 GGTGILESSVGHQFEIGNLTLEYFAYLSQCMAAIHALHGRYATDQAGAIKTITEQMRRDK 426
G +++ + QFE + S+ A A + + + +
Sbjct: 184 GHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQD-PPLMFTEEYQKSLLEQYH 242
Query: 427 GVLREDGSGHNMGALYWQLNDIYQAGAIKTITEQMRRDKGVLREDG----SGHNMGALYW 482
L + + +G L W D ++ T + KG+ + + YW
Sbjct: 243 LGLDQKRRKYVVGELIWNFADFMTE---QSPTRVLGNKKGIFTRQRQPKSAAFLLRERYW 299
Query: 483 QL 484
++
Sbjct: 300 KI 301
>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 160
Score = 84.3 bits (208), Expect = 2e-19
Identities = 49/62 (79%), Positives = 52/62 (83%)
Query: 572 GKMRKRGCIVSKLLAKMMCTSGLKHIITMDLHQKEIQGFFDCPVDNLRASPFLLQYIQDS 631
KMRKRG IV KLLA M+ +GL HIITMDLHQKEIQGFF PVDNLRASPFLLQYIQ+
Sbjct: 99 SKMRKRGSIVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQEE 158
Query: 632 IP 633
IP
Sbjct: 159 IP 160
Score = 47.7 bits (113), Expect = 9e-07
Identities = 22/29 (75%), Positives = 25/29 (86%)
Query: 976 AEEIQGFFDCPVDNLRASPFLLQYIQDSV 1004
+EIQGFF PVDNLRASPFLLQYIQ+ +
Sbjct: 131 QKEIQGFFSFPVDNLRASPFLLQYIQEEI 159
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3
{Escherichia coli [TaxId: 562]}
Length = 292
Score = 85.0 bits (209), Expect = 2e-18
Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 10/141 (7%)
Query: 183 KGRYFYFEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGVY 242
+ +N P+ +G N L + +E T+ ++ K+ N N +R
Sbjct: 5 ENGLLL--LNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHY--P 60
Query: 243 MSDYFYETCDELGILIWQDMMFAC------NNYPATPTFLQSVRSEISQTVRRVQHHPCI 296
+Y CD G+ + + N P +L ++ +++ V+R ++HP +
Sbjct: 61 NHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSV 120
Query: 297 AVWAGNNEMEAHNYDYYQNLW 317
+W+ NE W
Sbjct: 121 IIWSLGNESGHGANHDALYRW 141
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3
{Arthrobacter sp. c2-2 [TaxId: 192168]}
Length = 297
Score = 81.5 bits (200), Expect = 4e-17
Identities = 29/144 (20%), Positives = 52/144 (36%), Gaps = 13/144 (9%)
Query: 183 KGRYFYFEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGVY 242
G F VN + G N R +E+ R+ L K N+N +R +
Sbjct: 4 VGDQFL--VNGRRVVFHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPH 61
Query: 243 MSDYFYETCDELGILIWQDMMFACNNYPA---------TPTFLQSVRSEISQTVRRVQHH 293
+ DE+G + + + + A P + ++ + +TV R ++H
Sbjct: 62 --PRLLDLADEMGFWVILECDLETHGFEAGGWVENPSDVPAWRDALVDRMERTVERDKNH 119
Query: 294 PCIAVWAGNNEMEAHNYDYYQNLW 317
P I +W+ NE + W
Sbjct: 120 PSIVMWSLGNESGTGSNLAAMAAW 143
>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase
{Bacillus subtilis [TaxId: 1423]}
Length = 159
Score = 77.7 bits (191), Expect = 4e-17
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 573 KMRKRGCIVSKLLAKMMCTSGLKHIITMDLHQKEIQGFFDCPVDNLRASPFLLQYIQD 630
K R R I +KL A ++ T+G +I +DLH +IQGFFD P+D+L P L +Y +
Sbjct: 98 KARSREPITAKLFANLLETAGATRVIALDLHAPQIQGFFDIPIDHLMGVPILGEYFEG 155
Score = 45.7 bits (108), Expect = 4e-06
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 976 AEEIQGFFDCPVDNLRASPFLLQYIQD 1002
A +IQGFFD P+D+L P L +Y +
Sbjct: 129 APQIQGFFDIPIDHLMGVPILGEYFEG 155
>d1u9ya2 c.61.1.2 (A:156-284) Phosphoribosylpyrophosphate synthetase
{Methanocaldococcus jannaschii [TaxId: 2190]}
Length = 129
Score = 68.1 bits (166), Expect = 4e-14
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Query: 1107 QHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSS 1166
+ E D R +VDD++ + A ++LK++GA KI H +L
Sbjct: 33 RLSPTEIQIAPKTLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIG 92
Query: 1167 DAPLLIEESPIDEVVVTNTIPHDVQKLQCPKIKTVDISILLSEAI 1211
DA + + ++EVV T+T ++ V ++ ++ + +
Sbjct: 93 DALNKLYSAGVEEVVGTDTYLS--------EVSKVSVAEVIVDLL 129
Score = 37.3 bits (86), Expect = 0.002
Identities = 15/135 (11%), Positives = 41/135 (30%), Gaps = 16/135 (11%)
Query: 902 GNWKMLHYFARKFFAPVLISPVFNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWNDTRPF 961
G + ++ A +S +++ + +V IV + + T
Sbjct: 10 GALEFAKTASKILNAEYDYLEKTRLSPTEIQIAPKTLDAK-DRDVFIVDDIISTGGTMAT 68
Query: 962 RSVKTPLVTVKLCAAEEIQGFFDCP-VDNLRASPFLLQYIQDSVVVTNTIPHDVQKLQCP 1020
K A + ++ L ++ + VV T+T
Sbjct: 69 AVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGV------EEVVGTDTYLS-------- 114
Query: 1021 KIKTVDISILLSEAI 1035
++ V ++ ++ + +
Sbjct: 115 EVSKVSVAEVIVDLL 129
Score = 35.3 bits (81), Expect = 0.010
Identities = 5/33 (15%), Positives = 16/33 (48%)
Query: 637 NAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQ 669
+ +++A + GA + A + ++ L + +
Sbjct: 1 DPIVLAPDKGALEFAKTASKILNAEYDYLEKTR 33
Score = 35.3 bits (81), Expect = 0.010
Identities = 5/33 (15%), Positives = 16/33 (48%)
Query: 710 NAVIVAKNPGAAKKATSYAERLRLGIAVIHGEQ 742
+ +++A + GA + A + ++ L + +
Sbjct: 1 DPIVLAPDKGALEFAKTASKILNAEYDYLEKTR 33
Score = 26.9 bits (59), Expect = 7.9
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 851 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFD 899
D R +VDD++ + A ++LK++GA KI H +L
Sbjct: 44 KTLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIG 92
>d1u9ya1 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate synthetase
{Methanocaldococcus jannaschii [TaxId: 2190]}
Length = 155
Score = 63.1 bits (153), Expect = 5e-12
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 573 KMRKRGCIVSKLLAKMMCTSGLKHIITMDLHQKEIQGFFDCPVDNLRASPFLLQYIQDSI 632
K I + LA + ++ + +IT++ H+ I+ FF P A P L +Y++D +
Sbjct: 96 KFNPGEAISIRALA-KIYSNIVDKLITINPHETHIKDFFTIPFIYGDAVPKLAEYVKDKL 154
Score = 45.4 bits (107), Expect = 6e-06
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 974 CAAEEIQGFFDCPVDNLRASPFLLQYIQDSV 1004
I+ FF P A P L +Y++D +
Sbjct: 124 PHETHIKDFFTIPFIYGDAVPKLAEYVKDKL 154
>d2vzsa1 b.1.4.1 (A:226-335) Exochitosanase CsxA, domains 2, 4 and 5
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 110
Score = 60.9 bits (147), Expect = 9e-12
Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 12/117 (10%)
Query: 54 RIRDILTDITYHEDLKSWHLSVRVILEAGLSQAVVKAKLTAELA--VGKKPLRVDSLVNA 111
+R + L L+V+ + S V+ + +A + + + +
Sbjct: 3 ALRSAHVIQKLNSALDHADLTVKADVR-NDSANAVQTTVAGTVAGKPISQTVSLAA---- 57
Query: 112 EPSHGEIEVVSTLMVLASEVELWWPNGYGEQPLYNLQITL-ASGVEMSTKSIKIGFR 167
E + V+ +V +WWP G G Q Y+L +T G K G R
Sbjct: 58 ----KERKTVTFPLVGLDRPNVWWPAGMGGQHRYDLDLTASVGGTPSDAAKSKFGVR 110
>d2je8a1 b.1.4.1 (A:220-330) Beta-mannosidase, domains 2, 4 and 5
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 111
Score = 53.2 bits (127), Expect = 4e-09
Identities = 23/116 (19%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 52 VARIRDILTDITYHEDLKSWHLSVRVILEAGLSQAVVKAKLTAELAV-GKKPLRVDSLVN 110
+A I D ++ LS +I+ + Q + A++ +++ G V V
Sbjct: 1 IATISDYYVR-QLSLTDENARLSNELIVNQIVPQKI-PAEVRVNVSLNGTTVTEVKQQVT 58
Query: 111 AEPSHGEIEVVSTLMVLASEVELWWPNGYGEQPLYNLQITL-ASGVEMSTKSIKIG 165
+P I + + + + W PNG+G LY+ + ++ +S +IG
Sbjct: 59 LQPGINHITLPAEV----TNPVRWMPNGWGTPTLYDFSAQIACGDRIVAEQSHRIG 110
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel
(Mytilus edulis) [TaxId: 6550]}
Length = 350
Score = 57.0 bits (136), Expect = 6e-09
Identities = 36/361 (9%), Positives = 71/361 (19%), Gaps = 63/361 (17%)
Query: 189 FEVNKVPIYSKGSNLIPVDVLPE-----RSNNESTIRDLLVSTKEANMNMLRVWG----- 238
N I+ G+N V+ + S +ST L + N +RVW
Sbjct: 9 LNYNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGE 68
Query: 239 ----------------GGVYMSDYFYETCDELGILIWQDMMFACNNYPA----------T 272
+ + ILI+ + T
Sbjct: 69 STPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRLNGLMVDT 128
Query: 273 PTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEAHNYDYYQNLWDPSTAPKSRFCSEFG 332
+ + +++ + W NE E +
Sbjct: 129 RKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGW 188
Query: 333 IQSLPQLSTFQKVATE-ADLASWRTPFFDSRQHLAGGTGILESSVGHQF--EIGNLTLEY 389
L + A P ++ H + +
Sbjct: 189 AGHLYSAQEIGRFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGG 248
Query: 390 FAYLSQCMAAIHALHGRYATDQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDIY 449
+ +H + K R K ++ + G
Sbjct: 249 KQSGTLSFYQVHTYDWQNHFGNESPFKHSFSNFRLKKPMVIGE-FNQEHG---------- 297
Query: 450 QAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDVWQA--PTWSSIDYDGNWK-MLH 506
+ +++ E GA W DV +
Sbjct: 298 AGMSSESMFEWAYTKGYS----------GAWTWSRTDVSWNNQLRGMQHLKSRTDHGQVQ 347
Query: 507 Y 507
+
Sbjct: 348 F 348
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon
esculentum) [TaxId: 4081]}
Length = 370
Score = 52.0 bits (123), Expect = 3e-07
Identities = 34/341 (9%), Positives = 74/341 (21%), Gaps = 46/341 (13%)
Query: 189 FEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMS---- 244
F +N +Y G N + + + + + + MN+ R W S
Sbjct: 11 FALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQ 70
Query: 245 --------------DYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRV 290
D+ + GI + ++ + + +++ +
Sbjct: 71 SAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDD 130
Query: 291 QHHPCIAVWAGN--------NEMEAHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQLSTF 342
V + Y++ + S +
Sbjct: 131 DFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNW 190
Query: 343 QKVAT----EADLASWRTPFFDSRQHLAGGTGILESSVGHQFEIGNLTLEYFAYLS-QCM 397
D + S + I N ++ + +
Sbjct: 191 VLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMY 250
Query: 398 AAIHALHGRYATDQAGAIKTITEQMRRDKG-----VLREDGSGHNMGALYWQLNDIYQAG 452
A + I + K ++ E G D Y
Sbjct: 251 PNQWLPGLTQEAQDKWASQWIQVHIDDSKMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEK 310
Query: 453 AIKTITEQMRRDKGVLREDGSGHNMGALYWQLNDVWQAPTW 493
TI + G G L+WQ+ ++
Sbjct: 311 IYGTIFNCAKSG---------GPCGGGLFWQVLGQG-MSSF 341
>d1jz8a1 b.1.4.1 (A:220-333) beta-Galactosidase, domains 2 and 4
{Escherichia coli [TaxId: 562]}
Length = 114
Score = 42.4 bits (99), Expect = 3e-05
Identities = 26/119 (21%), Positives = 39/119 (32%), Gaps = 11/119 (9%)
Query: 54 RIRDILTDITYHEDLKSWHLSVRVILEAGLSQAV-VKAKLT-AELAVGKKPLRVDSLVNA 111
+I D +++D L V + L + V L E V +
Sbjct: 2 QISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIID 61
Query: 112 EPSHGEIEVVSTLMVLASEVELWWPNGYGEQP-LYNLQITL--ASGVEMSTKSIKIGFR 167
E V L V +LW E P LY + L A G + ++ +GFR
Sbjct: 62 ERGGYADRVTLRLNV--ENPKLWSA----EIPNLYRAVVELHTADGTLIEAEACDVGFR 114
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId:
51453]}
Length = 344
Score = 44.6 bits (104), Expect = 5e-05
Identities = 21/175 (12%), Positives = 40/175 (22%), Gaps = 50/175 (28%)
Query: 189 FEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGV------Y 242
F ++ Y G+N L ++ +ST + + + ++RVWG
Sbjct: 12 FNIDGKVGYFAGTNCYWCSFLTNHADVDSTFSHI----SSSGLKVVRVWGFNDVNTQPSP 67
Query: 243 MSDYFYETCDELGILIWQDMMFAC--------------------NNYPAT---------- 272
+F + + NN+
Sbjct: 68 GQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAF 127
Query: 273 ----------PTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEMEAHNYDYYQNLW 317
R + V R + I W NE + +
Sbjct: 128 GGNATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQ 182
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId:
39650]}
Length = 410
Score = 42.5 bits (98), Expect = 2e-04
Identities = 17/155 (10%), Positives = 34/155 (21%), Gaps = 26/155 (16%)
Query: 189 FEVNKVPIYSKGSNLIPVDVLPERSN--NESTIRDLLVSTKEANMNMLRVWGG------- 239
FE+ P G N+ L + + + L + K +N LRV
Sbjct: 11 FELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEIN 70
Query: 240 -----------------GVYMSDYFYETCDELGILIWQDMMFACNNYPATPTFLQSVRSE 282
+ DY + + + ++ + E
Sbjct: 71 SAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGE 130
Query: 283 ISQTVRRVQHHPCIAVWAGNNEMEAHNYDYYQNLW 317
Q + + Y+
Sbjct: 131 PVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTL 165
>d1bhga1 b.1.4.1 (A:226-328) beta-Glucuronidase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 103
Score = 39.3 bits (91), Expect = 2e-04
Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 25/120 (20%)
Query: 55 IRDILTDITYHEDLKSWHLSVRVILEAGLSQAVVKAKLTAELAVGKKPLRVDSLVNAEPS 114
I DI +T + S ++ ++ ++ KL L + + + N +
Sbjct: 3 IDDI--TVTTSVEQDSGLVNYQISVKGSNL-----FKLEVRLLDAENKV----VANGTGT 51
Query: 115 HGEIEVVSTLMVLASEVELWWPNGYGEQP--LYNLQITL----ASGVEMSTKSIKIGFRT 168
G+++V V LWWP E+P LY+L++ L + G ++ +G RT
Sbjct: 52 QGQLKV--------PGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLPVGIRT 103
>d2je8a4 b.18.1.5 (A:28-219) Beta-mannosidase {Bacteroides
thetaiotaomicron [TaxId: 818]}
Length = 192
Score = 38.3 bits (88), Expect = 0.002
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 1 MLRKMQASFAWDWGPAMPSVGI 22
RK S+ WDWG M + G+
Sbjct: 161 FSRKAPYSYGWDWGIRMVTSGV 182
>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426
(TTHA1462) {Thermus thermophilus [TaxId: 274]}
Length = 208
Score = 38.2 bits (88), Expect = 0.003
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 1110 AKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAP 1169
A+ + GR ++VDD V S AA V+ G ++ V + S +A
Sbjct: 106 AERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVV--AVPVASPEAV 163
Query: 1170 LLIEESPIDEVVVTNTIPH 1188
++ EVV +
Sbjct: 164 ERLK--ARAEVVALSVPQD 180
Score = 34.7 bits (79), Expect = 0.035
Identities = 12/45 (26%), Positives = 17/45 (37%)
Query: 851 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG 895
GR ++VDD V S AA V+ G ++ V
Sbjct: 114 PKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVA 158
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas
haloplanktis [TaxId: 228]}
Length = 293
Score = 37.9 bits (87), Expect = 0.005
Identities = 29/319 (9%), Positives = 73/319 (22%), Gaps = 55/319 (17%)
Query: 189 FEVNKVPIYSKGSNL--IPVDVLPERSNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDY 246
G +L E+ T+ E N ++R G +
Sbjct: 12 ILAGGENTSFAGPSLFWSNTGWGAEKFYTAETVAKAK---TEFNATLIRAAIGHGTSTGG 68
Query: 247 FYETCDELGILIWQDMMFACNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEME 306
E + + V + ++
Sbjct: 69 SLNFDWEGNMSR------------------------LDTVVNAAIAEDMYVIIDFHSHEA 104
Query: 307 AHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHLA 366
+ + +++ + + +++ D+ + D + +
Sbjct: 105 HTDQATAVRFF---EDVATKYGQYDNVIYEI-YNEPLQISWVNDIKPYAETVIDKIRAID 160
Query: 367 GGTGILESSVGHQFEIGNLTLEYFAYLSQCMAAIHALHGRYATDQAGAIKTITEQMRRDK 426
I+ + ++ + + +H G + +T +
Sbjct: 161 PDNLIVVGTPTWSQDVDVASQNPI-DRANIAYTLHFYAGTHGQSYRNKAQTALDNGI--A 217
Query: 427 GVLREDGSGHNMGALYWQLNDIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLND 486
E G+ + G +N+ + +N+ W LND
Sbjct: 218 LFATEWGTVNADGNGGVNINE------TDAWMAFFKT-----------NNISHANWALND 260
Query: 487 VWQAPTWSSIDYDGNWKML 505
+ S G+W L
Sbjct: 261 --KNEGASLFTPGGSWNSL 277
>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase
TTHA1613 {Thermus thermophilus [TaxId: 274]}
Length = 174
Score = 36.2 bits (83), Expect = 0.010
Identities = 25/176 (14%), Positives = 52/176 (29%), Gaps = 16/176 (9%)
Query: 1006 VTNTIPHDVQKLQCPKIKTVDISILLS--EAIRRMHNKESMSYLFRNVDGRASPPPSSIA 1063
VT +P ++ + + + L E R + + + + + S I
Sbjct: 10 VTRHVP-LIEP---LPGRRIPLVEFLGDPEFTRAAA-EALRPLVPKEAEILFTTETSPIP 64
Query: 1064 PPSSPAVDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPPISVVGDVG 1123
A L +P V R P P + +GV + +
Sbjct: 65 LTHVLAEAL---GLPYVVARRRRRPYMEDPIIQEVQTLTLGVGE---VLWLDRRFAEKLL 118
Query: 1124 GRVAIMVDDMVDDVHSFVAAAEVLKDRGA--YKIYVLATHGLLSSDAPLLIEESPI 1177
+ ++V D+V + A +++ G + G + E P+
Sbjct: 119 NQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTPGLAVDTV-AELPV 173
Score = 33.5 bits (76), Expect = 0.068
Identities = 9/54 (16%), Positives = 20/54 (37%)
Query: 839 HGDGSKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 892
G G + + ++V D+V + A +++ G + + LA
Sbjct: 101 LGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLA 154
Score = 33.1 bits (75), Expect = 0.11
Identities = 10/94 (10%), Positives = 23/94 (24%), Gaps = 7/94 (7%)
Query: 589 MCTSGLKHIITMDLHQKEIQGFFDCPVDNLRASPFLLQYIQDSIPDYKNA---VIVAKNP 645
+ G+ + + E P+ P + +++ ++
Sbjct: 5 ITVGGVTRHVPLI----EPLPGRRIPLVEFLGDPEFTRAAAEALRPLVPKEAEILFTTET 60
Query: 646 GAAKKATSYAERLRLGIAVIHGEQKESESDEYEV 679
AE L L V ++ D
Sbjct: 61 SPIPLTHVLAEALGLPYVVARRRRRPYMEDPIIQ 94
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus
[TaxId: 1394]}
Length = 208
Score = 33.8 bits (77), Expect = 0.076
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 849 ISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 893
+ + DV R I+VD M+ S VAA + LK RGA I +
Sbjct: 115 VKLPSDVEERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFMCL 159
Score = 33.8 bits (77), Expect = 0.076
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 1116 ISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 1160
+ + DV R I+VD M+ S VAA + LK RGA I +
Sbjct: 115 VKLPSDVEERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFMCL 159
>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus
[TaxId: 274]}
Length = 208
Score = 32.2 bits (73), Expect = 0.24
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 1103 VGVPQHPAKEKP---PISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 1158
+G+ + P P I + D+ R A ++D M+ S A +LK+RGA + ++
Sbjct: 99 IGLYRDPESLNPVQYYIKLPPDIAERRAFLLDPMLATGGSASLALSLLKERGATGVKLM 157
Score = 31.5 bits (71), Expect = 0.49
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 849 ISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 891
I + D+ R A ++D M+ S A +LK+RGA + ++
Sbjct: 115 IKLPPDIAERRAFLLDPMLATGGSASLALSLLKERGATGVKLM 157
>d2je8a3 b.1.4.1 (A:679-783) Beta-mannosidase, domains 2, 4 and 5
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 105
Score = 30.1 bits (68), Expect = 0.44
Identities = 10/55 (18%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 918 VLISPVFNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWNDTRPFRSVKTPLVTVK 972
VLI+P+ + +L V L++D + +T+ + ++ + ++ + V
Sbjct: 1 VLINPIQQ--NDSLSVYLISDRLDTMEQMTLEMKVVDFDGKTLGKKIQVHSLEVP 53
Score = 29.0 bits (65), Expect = 1.2
Identities = 10/54 (18%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 516 VLISPVLNVSSRTLEVVLLNDPNRPLHNVTIVTESYAWNDTRPFRSVKTPLVTV 569
VLI+P+ + +L V L++D + +T+ + ++ + ++ + V
Sbjct: 1 VLINPIQQ--NDSLSVYLISDRLDTMEQMTLEMKVVDFDGKTLGKKIQVHSLEV 52
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal
domain {Penicillium sp. [TaxId: 5081]}
Length = 354
Score = 31.3 bits (70), Expect = 0.75
Identities = 26/201 (12%), Positives = 52/201 (25%), Gaps = 48/201 (23%)
Query: 171 LIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSNLIPVDVLPERSNNESTIRDLLVSTKEAN 230
L+Q +V + VN + + +V P R S D+ K
Sbjct: 1 LLQKYVTWDE------HSIFVNGERLM-----IFSGEVHPYRLPVASLYIDIFEKVKALG 49
Query: 231 MNMLRVWG--------------GGVYMSDYFYETCDELGILI----------------WQ 260
N + + G++ F++ E GI + +
Sbjct: 50 FNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFP 109
Query: 261 DMMFACNNYPAT--PTFLQSVRSEISQTVRRV-----QHHPCIAVWAGNNEMEAHNYDYY 313
+ + T +L++ + S + + I ++ NE Y
Sbjct: 110 GWLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYN 169
Query: 314 QNLWDPSTAPKSRFCSEFGIQ 334
+ GI
Sbjct: 170 GFPDGSYMQYIEDHARDAGIV 190
>d1dqna_ c.61.1.1 (A:) Guanine PRTase {Giardia lamblia [TaxId:
5741]}
Length = 230
Score = 30.7 bits (69), Expect = 0.90
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 837 SYHGDGSKEKPPIS--VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 892
SY G + + R +++D+ VD H+ + E +K +V
Sbjct: 96 SYKGTRQESVVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKHAKICSCFVKD 153
>d2bl8a1 a.29.8.2 (A:4-103) Enterocine A immunity protein, EntA-Im
{Enterococcus faecium [TaxId: 1352]}
Length = 100
Score = 28.6 bits (64), Expect = 1.4
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 7/34 (20%)
Query: 213 SNNESTIRDLLVSTKEANMNMLRVWGGGVYMSDY 246
E IR+L + A +N G+Y +DY
Sbjct: 68 EYQEELIRNLSEIGRTAGIN-------GLYRADY 94
>d1pd0a2 b.2.8.1 (A:133-215,A:553-646) Sec24 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 177
Score = 29.4 bits (66), Expect = 1.7
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 1070 VDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVG 1104
+DL+T+ P + PPPP V+PP + ++
Sbjct: 9 IDLLTELPPPITDLTLPPPPLVIPPERMLVPSELS 43
>d1j7ja_ c.61.1.1 (A:) Hypoxanthine PRTase {Salmonella typhimurium
[TaxId: 90371]}
Length = 172
Score = 28.8 bits (64), Expect = 2.4
Identities = 12/70 (17%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Query: 828 PSPCPAPLLSYHGDGSKEKPPISVVGDVG----GRVAIMVDDMVDDVHSFVAAAEVLKDR 883
P S +G G + ++ D+ G+ ++V+D++D ++ E+L R
Sbjct: 57 PHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILGLR 116
Query: 884 GAYKIYVLAT 893
+ +
Sbjct: 117 EPKSLAICTL 126
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain
{Thermoanaerobacterium saccharolyticum [TaxId: 28896]}
Length = 346
Score = 29.3 bits (64), Expect = 2.8
Identities = 30/337 (8%), Positives = 79/337 (23%), Gaps = 60/337 (17%)
Query: 220 RDLLVSTKEANMNMLRV-----WGGGVY----------------MSDYFYETCDELGILI 258
L + + +R G+Y D +++ E+GI
Sbjct: 24 ETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFYNFTYIDRIFDSFLEIGIRP 83
Query: 259 WQDMMFA-------------CNNYPATPTFLQSVRSEISQTVRRVQHHPCIAVWAGNNEM 305
+ ++ F P + + + I
Sbjct: 84 FVEIGFMPKKLASGTQTVFYWEGNVTPPKDYEKWSDLVKAVLHHFISRYGIEEVLKWPFE 143
Query: 306 EAHNYDYYQNLWDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADLASWRTPFFDSRQHL 365
+ + + D + +++ +++ KV A D
Sbjct: 144 IWNEPNLKEFWKDADEKEYFKLYKVT-AKAIKEVNENLKVGGPAICGGADYWIEDFLNFC 202
Query: 366 AGGTGILESSVGHQFEIGNLTLEYFAYLSQCMAAIHALHGRYATDQAGAIKTITEQMRRD 425
++ H + + + + Y ++ ++ I +
Sbjct: 203 YEENVPVDFVSRHAY------TSKQGEYTPHLIYQEIMPSEYMLNEFKTVREIIKNSHFP 256
Query: 426 KGVLREDGSGHNMGALYWQLNDIYQAGAIKTITEQMRRDKGVLREDGSGHNMGALYWQLN 485
+ + + A I I + + YW +
Sbjct: 257 NLPFHITEYNTSYSPQNPVHDTPFNAAYIARILSEG-----------GDYVDSFSYWTFS 305
Query: 486 DVWQAPTWSSIDYDGNWKMLH--------YFARKFFA 514
DV++ + G + ++ ++ KFF
Sbjct: 306 DVFEERDVPRSQFHGGFGLVALNMIPKPTFYTFKFFN 342
>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase,
HppD {Streptomyces avermitilis [TaxId: 33903]}
Length = 199
Score = 28.8 bits (64), Expect = 2.9
Identities = 10/79 (12%), Positives = 20/79 (25%), Gaps = 28/79 (35%)
Query: 858 RVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYV---------------------LATHGL 896
+A+ D+V ++ G + L +
Sbjct: 92 HIALNTGDIV-------ETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKI 144
Query: 897 LFDYDGNWKMLHYFARKFF 915
L D D + +L F +
Sbjct: 145 LADRDEDGYLLQIFTKPVQ 163
>d1z7ga1 c.61.1.1 (A:4-217) Hypoxanthine-guanine PRTase (HGPRTase)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 214
Score = 28.8 bits (64), Expect = 3.3
Identities = 5/64 (7%), Positives = 22/64 (34%)
Query: 1097 RTMEMDVGVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIY 1156
++ + + + G+ ++V+D++D + +++ +
Sbjct: 96 IRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVK 155
Query: 1157 VLAT 1160
V +
Sbjct: 156 VASL 159
>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides
fragilis [TaxId: 817]}
Length = 230
Score = 28.5 bits (62), Expect = 4.2
Identities = 9/54 (16%), Positives = 16/54 (29%), Gaps = 1/54 (1%)
Query: 855 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDYDGNWKMLH 908
+ A ++D ++D + V A + H D G L
Sbjct: 41 INNHQAALLDTPINDAQTETLVNWVADSLHAKVTTFIPNHW-HGDCIGGLGYLQ 93
>d2alea1 d.79.3.1 (A:1-126) Small nuclear
ribonucleoprotein-associated protein 1, Snu13p
{Saccharomyces cerevisiae [TaxId: 4932]}
Length = 126
Score = 27.6 bits (61), Expect = 4.5
Identities = 10/52 (19%), Positives = 17/52 (32%)
Query: 151 LASGVEMSTKSIKIGFRTVELIQDHVDPNHLEKGRYFYFEVNKVPIYSKGSN 202
L G +TK++ G ++ +P + E VP S
Sbjct: 33 LKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSR 84
>d1jvra_ a.61.1.2 (A:) HTLV-II matrix protein {Human T-cell leukemia
virus type 2 [TaxId: 11909]}
Length = 137
Score = 27.5 bits (61), Expect = 5.3
Identities = 14/57 (24%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Query: 1060 SSIAPPSSPA-VDLVTKTMPSVDGRASPPPPPVLPPSSRTMEMDVGVPQHPAKEKPP 1115
+S+ P P V + + S P PV P T P P PP
Sbjct: 70 ASLIPKGYPGRVVEIINILVKNQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPP 126
>d1cjba_ c.61.1.1 (A:) Hypoxanthine-guanine PRTase (HGPRTase)
{Plasmodium falciparum [TaxId: 5833]}
Length = 228
Score = 28.4 bits (63), Expect = 5.4
Identities = 9/52 (17%), Positives = 21/52 (40%)
Query: 1107 QHPAKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 1158
Q + + + G+ ++V+D++D + V E LK + +
Sbjct: 119 QSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIA 170
Score = 28.4 bits (63), Expect = 5.5
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 854 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 891
+ G+ ++V+D++D + V E LK + +
Sbjct: 133 CLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIA 170
>d3c10a1 c.42.1.2 (A:515-900) Histone deacetylase 7, HDAC7 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 386
Score = 28.4 bits (62), Expect = 5.5
Identities = 32/271 (11%), Positives = 75/271 (27%), Gaps = 14/271 (5%)
Query: 307 AHNYDYYQNL-WDPSTAPKSRFCSEFGIQSLPQLSTFQKVATEADLAS-WRTPFFDSRQH 364
H+ + +P + K G+ + D + W +
Sbjct: 66 VHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAAR 125
Query: 365 LAGGTGILESSVGHQFEIGNLTLEYFAYLSQCMAAIHALHGRYATDQAGAIKTITEQMRR 424
A G+ + E+ N + + A A + + +Q +
Sbjct: 126 WAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFN-SVAIACRQLQQQSKA 184
Query: 425 DKGVLREDGSGHNMG--ALYWQLNDIYQAGAIKTITEQMRRDKGVLREDGSGHNMG-ALY 481
K ++ + H G ++Q + + G + E G+G G +
Sbjct: 185 SKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVN 244
Query: 482 WQLNDVWQAPTWSSIDYDGNWKMLHYFARKFFAPVLISPVLNVSSRTLEVVLLNDPNRPL 541
P +Y ++++ + F+P L+ + P PL
Sbjct: 245 VAWAGGLDPPMGDP-EYLAAFRIVVMPIAREFSPDLVLVSAGFDA------AEGHPA-PL 296
Query: 542 HNVTIVTESYAWNDTRPFRSVKTPLVTVVSG 572
+ + + + + +V + G
Sbjct: 297 GGYHVSAKCFGYMTQQLMNLAGGAVVLALEG 327
>d1yfza1 c.61.1.1 (A:3-180) Xanthine-guanine PRTase (XPRTase)
{Thermoanaerobacter tengcongensis [TaxId: 119072]}
Length = 178
Score = 27.6 bits (61), Expect = 6.1
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 834 PLLSYHGDGSKEKPPISVVG----DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIY 889
+S +G +K + ++ D+ G+ ++V+D++D + E L R +
Sbjct: 65 LAVSSYGSSTKSSGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLK 124
Query: 890 VLA 892
+
Sbjct: 125 ICT 127
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Length = 385
Score = 28.2 bits (61), Expect = 6.1
Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 843 SKEKPPISVVGDVGGRVAIMVDD--MVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLFDY 900
+ P + + + ++ D V+ +A + L GLL D+
Sbjct: 28 GRAHPRLFL--PLPRFPLALIFDPEGVEGA--LLAEGTTKATFQYRALSRLTGRGLLTDW 83
Query: 901 DGNWKMLHYFARKFFAP 917
+WK + F P
Sbjct: 84 GESWKEARKALKDPFLP 100
>d2a13a1 b.60.1.8 (A:14-166) Hypothetical protein At1g79260 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 153
Score = 27.5 bits (61), Expect = 6.1
Identities = 10/57 (17%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Query: 119 EVVSTLMVLASEVELWWPNGYGEQPLYNLQITLASGVEMSTKSIKIGFRTVELIQDH 175
+ + VE+ G + I L S + + +K R EL+
Sbjct: 76 SIEVVIAQSTGLVEVQ----KGTYNVDEQSIKLKSDLVGNASKVKEISREFELVDGK 128
>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium
yoelii yoelii [TaxId: 73239]}
Length = 404
Score = 28.2 bits (62), Expect = 6.7
Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
Query: 1110 AKEKPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG-LLSSDA 1168
+ I V DV G+ + + +++ + + LK+ G + H +
Sbjct: 326 ELKDSKI--VRDVRGKGLLCAIEFKNELVNVLDICLKLKENG---LITRDVHDKTIRLTP 380
Query: 1169 PLLIEESPIDEVV 1181
PL I + +DE
Sbjct: 381 PLCITKEQLDECT 393
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase,
catalytic domain {Mouse-ear cress (Arabidopsis thaliana)
[TaxId: 3702]}
Length = 273
Score = 27.9 bits (61), Expect = 7.7
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 743 KESESDEYEVDLTRYIRENPELYYKEY--AELYVNTLK 778
K E ++ V + R I ENPEL Y+E ++L + L+
Sbjct: 7 KSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELE 44
>d1wzda1 a.132.1.1 (A:7-213) Heme oxygenase HmuO {Corynebacterium
diphtheriae [TaxId: 1717]}
Length = 207
Score = 27.4 bits (60), Expect = 9.1
Identities = 18/126 (14%), Positives = 40/126 (31%), Gaps = 7/126 (5%)
Query: 728 AERLRLGIAVIHGEQKESESDEYEVDLTRYIRENPELYYKEYAELYVNTLKPIVLQYDPT 787
A L+ A H +++E + DL + R + + + ++ + D
Sbjct: 3 AVELKQSTAQAH---EKAEHSTFMSDLLK-GRLGVAEFTRLQEQAWL-FYTALEQAVDAV 57
Query: 788 RPYLTSSPTNGIESEKAKYALADNPYSNIYGDSGWTGVSSPSPCPAPLLSYHGDGSKEKP 847
R + +A+ D + G S W + SP ++ +
Sbjct: 58 RASGFAESLLDPALNRAEVLARD--LDKLNGSSEWRSRITASPAVIDYVNRLEEIRDNVD 115
Query: 848 PISVVG 853
++V
Sbjct: 116 GPALVA 121
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.134 0.402
Gapped
Lambda K H
0.267 0.0446 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,690,344
Number of extensions: 227867
Number of successful extensions: 739
Number of sequences better than 10.0: 1
Number of HSP's gapped: 711
Number of HSP's successfully gapped: 84
Length of query: 1231
Length of database: 2,407,596
Length adjustment: 96
Effective length of query: 1135
Effective length of database: 1,089,516
Effective search space: 1236600660
Effective search space used: 1236600660
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.8 bits)