Query psy15570
Match_columns 84
No_of_seqs 126 out of 1030
Neff 6.6
Searched_HMMs 29240
Date Sat Aug 17 00:42:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15570.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15570hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1u9y_A RPPK;, ribose-phosphate 99.7 2.4E-18 8.3E-23 123.5 6.0 66 17-82 195-261 (284)
2 1dku_A Protein (phosphoribosyl 99.7 3.4E-18 1.1E-22 124.5 6.3 67 16-82 207-273 (317)
3 3s5j_B Ribose-phosphate pyroph 99.7 1.3E-17 4.6E-22 122.2 8.6 66 17-82 204-269 (326)
4 3dah_A Ribose-phosphate pyroph 99.7 7.6E-18 2.6E-22 123.1 7.1 66 17-82 207-272 (319)
5 2ji4_A Phosphoribosyl pyrophos 99.7 3.3E-17 1.1E-21 121.9 7.9 67 16-82 262-328 (379)
6 3lrt_A Ribose-phosphate pyroph 99.7 1.2E-16 4.2E-21 115.2 7.7 61 21-82 198-258 (286)
7 3dez_A OPRT, oprtase, orotate 99.4 1.9E-13 6.6E-18 96.6 6.9 78 4-81 121-204 (243)
8 2aee_A OPRT, oprtase, orotate 99.4 1.8E-13 6.3E-18 93.7 5.8 77 5-81 90-172 (211)
9 3m3h_A OPRT, oprtase, orotate 99.4 3.7E-13 1.3E-17 94.6 6.5 76 5-80 110-191 (234)
10 1zn8_A APRT, adenine phosphori 99.4 2.1E-13 7.3E-18 90.9 4.8 56 24-79 118-173 (180)
11 2yzk_A OPRT, oprtase, orotate 99.4 1.1E-12 3.7E-17 87.9 7.5 60 19-79 99-158 (178)
12 1y0b_A Xanthine phosphoribosyl 99.4 1.3E-12 4.5E-17 88.2 7.0 56 24-79 118-173 (197)
13 2wns_A Orotate phosphoribosylt 99.4 1.3E-12 4.4E-17 89.4 6.9 74 5-79 84-163 (205)
14 1wd5_A Hypothetical protein TT 99.4 8.4E-13 2.9E-17 90.1 5.7 56 21-78 115-170 (208)
15 1i5e_A Uracil phosphoribosyltr 99.3 1.2E-12 4.2E-17 90.2 4.6 60 19-80 117-176 (209)
16 2dy0_A APRT, adenine phosphori 99.3 3.4E-12 1.2E-16 86.0 6.1 56 24-79 124-179 (190)
17 1vdm_A Purine phosphoribosyltr 99.3 5.4E-12 1.8E-16 81.8 5.4 43 22-64 79-121 (153)
18 1o5o_A Uracil phosphoribosyltr 99.3 3.7E-12 1.3E-16 89.0 4.9 59 19-79 129-187 (221)
19 1qb7_A APRT, adenine phosphori 99.3 1.5E-11 5E-16 86.0 7.7 60 17-76 127-188 (236)
20 2e55_A Uracil phosphoribosyltr 99.2 6.8E-12 2.3E-16 86.9 5.2 57 20-79 116-172 (208)
21 1l1q_A Adenine phosphoribosylt 99.2 1.1E-11 3.6E-16 83.4 5.8 58 24-81 115-174 (186)
22 2p1z_A Phosphoribosyltransfera 99.2 2.1E-11 7.3E-16 81.8 7.2 60 19-79 106-166 (180)
23 1v9s_A Uracil phosphoribosyltr 99.2 4.9E-12 1.7E-16 87.6 3.7 59 19-79 116-174 (208)
24 1ecf_A Glutamine phosphoribosy 99.2 9.4E-12 3.2E-16 94.8 5.5 59 17-75 349-408 (504)
25 2ehj_A Uracil phosphoribosyltr 99.2 9.6E-12 3.3E-16 86.2 5.0 57 20-78 117-173 (208)
26 1vch_A Phosphoribosyltransfera 99.2 1.2E-11 4.3E-16 81.8 5.0 46 17-62 107-156 (175)
27 1a3c_A PYRR, pyrimidine operon 99.2 1.6E-11 5.3E-16 81.8 4.9 44 20-63 92-136 (181)
28 2geb_A Hypoxanthine-guanine ph 99.2 2.8E-11 9.6E-16 81.3 5.9 42 22-63 94-135 (185)
29 1hgx_A HGXPRTASE, hypoxanthine 99.2 3E-11 1E-15 80.8 5.9 42 21-62 90-131 (183)
30 1ao0_A Glutamine phosphoribosy 99.2 3.4E-11 1.2E-15 90.6 6.8 53 16-68 327-385 (459)
31 1ufr_A TT1027, PYR mRNA-bindin 99.2 4.3E-11 1.5E-15 79.8 6.3 44 19-62 89-133 (181)
32 1yfz_A Hypoxanthine-guanine ph 99.2 4.4E-11 1.5E-15 81.4 5.9 43 21-63 113-155 (205)
33 1g2q_A Adenine phosphoribosylt 99.1 4.3E-11 1.5E-15 80.4 5.1 52 23-74 119-170 (187)
34 1tc1_A Protein (hypoxanthine p 99.1 5.7E-11 2E-15 82.4 5.9 43 21-63 98-140 (220)
35 2ywu_A Hypoxanthine-guanine ph 99.1 7.2E-11 2.5E-15 79.7 5.9 43 21-63 90-132 (181)
36 1pzm_A HGPRT, hypoxanthine-gua 99.1 7.6E-11 2.6E-15 81.0 5.7 42 22-63 114-155 (211)
37 3mjd_A Orotate phosphoribosylt 99.1 1.1E-10 3.8E-15 81.9 6.7 60 5-64 109-174 (232)
38 1bd3_D Uprtase, uracil phospho 99.1 3.8E-11 1.3E-15 85.0 4.1 57 20-78 150-208 (243)
39 2jbh_A Phosphoribosyltransfera 99.1 1.5E-10 5.1E-15 80.2 5.9 42 22-63 130-171 (225)
40 3ohp_A Hypoxanthine phosphorib 99.1 1.7E-10 5.8E-15 77.6 5.9 42 21-62 86-127 (177)
41 1fsg_A HGPRTASE, hypoxanthine- 99.1 1.7E-10 5.7E-15 80.4 5.8 42 22-63 138-179 (233)
42 3o7m_A Hypoxanthine phosphorib 99.1 1.8E-10 6.2E-15 78.2 5.9 42 22-63 90-131 (186)
43 3hvu_A Hypoxanthine phosphorib 99.1 2.3E-10 7.7E-15 78.9 6.0 42 22-63 112-153 (204)
44 2ps1_A Orotate phosphoribosylt 99.1 3.9E-10 1.3E-14 78.0 6.9 60 5-64 98-163 (226)
45 1w30_A PYRR bifunctional prote 99.1 3.2E-10 1.1E-14 77.4 6.3 41 23-63 109-150 (201)
46 1z7g_A HGPRT, HGPRTASE, hypoxa 99.0 3.8E-10 1.3E-14 77.8 6.1 43 22-64 122-164 (217)
47 3qw4_B UMP synthase; N-termina 99.0 4.4E-10 1.5E-14 85.1 6.4 75 5-80 338-418 (453)
48 3dmp_A Uracil phosphoribosyltr 99.0 3.2E-10 1.1E-14 79.0 4.0 56 19-77 123-180 (217)
49 1lh0_A OMP synthase; loop clos 98.9 1.3E-09 4.5E-14 74.8 6.1 58 6-64 92-155 (213)
50 3ozf_A Hypoxanthine-guanine-xa 98.9 1.1E-09 3.7E-14 77.7 5.4 41 23-63 153-193 (250)
51 3n2l_A OPRT, oprtase, orotate 98.9 2.1E-09 7.1E-14 75.8 6.7 59 5-64 116-180 (238)
52 3acd_A Hypoxanthine-guanine ph 98.9 2.4E-09 8.2E-14 72.4 5.9 42 21-62 90-131 (181)
53 2xbu_A Hypoxanthine-guanine ph 98.9 3.1E-09 1.1E-13 73.6 6.1 43 22-64 99-158 (221)
54 1xtt_A Probable uracil phospho 98.8 2.1E-09 7.3E-14 74.7 3.6 52 23-77 128-182 (216)
55 1o57_A PUR operon repressor; p 98.8 4.2E-09 1.4E-13 75.7 4.5 41 24-64 194-234 (291)
56 1dqn_A Guanine phosphoribosylt 98.5 1.1E-08 3.9E-13 71.5 0.6 41 22-70 114-154 (230)
57 1nul_A XPRT, xanthine-guanine 98.5 2E-08 6.8E-13 65.6 1.2 29 23-51 78-106 (152)
58 4efz_A Metallo-beta-lactamase 77.8 3.2 0.00011 28.4 4.4 48 20-67 21-76 (298)
59 3hix_A ALR3790 protein; rhodan 75.9 4.9 0.00017 23.4 4.3 45 25-79 51-95 (106)
60 3ilm_A ALR3790 protein; rhodan 74.8 5.7 0.00019 24.6 4.6 44 25-78 55-98 (141)
61 2xf4_A Hydroxyacylglutathione 74.0 2 6.9E-05 27.5 2.4 36 26-65 23-58 (210)
62 2jtq_A Phage shock protein E; 73.3 9.4 0.00032 21.0 5.1 33 25-60 40-72 (85)
63 3foj_A Uncharacterized protein 70.4 11 0.00039 21.4 5.0 44 25-79 55-98 (100)
64 3gk5_A Uncharacterized rhodane 67.8 9.2 0.00032 22.3 4.2 43 25-78 54-96 (108)
65 3odg_A Xanthosine phosphorylas 67.0 7.1 0.00024 27.6 4.1 61 6-66 56-129 (287)
66 1gmx_A GLPE protein; transfera 66.6 7 0.00024 22.6 3.5 32 25-59 57-88 (108)
67 3dah_A Ribose-phosphate pyroph 64.0 21 0.00073 25.5 6.2 44 19-62 47-94 (319)
68 3fuc_A Purine nucleoside phosp 61.9 11 0.00037 26.6 4.3 50 17-66 66-120 (284)
69 1u9y_A RPPK;, ribose-phosphate 61.8 26 0.0009 24.3 6.3 59 4-62 19-86 (284)
70 2zwr_A Metallo-beta-lactamase 61.5 2.5 8.6E-05 27.1 0.9 37 27-67 22-58 (207)
71 3s5j_B Ribose-phosphate pyroph 61.5 40 0.0014 24.2 7.3 59 4-62 22-90 (326)
72 2hhg_A Hypothetical protein RP 61.4 16 0.00054 21.8 4.6 44 25-78 85-128 (139)
73 3mvn_A UDP-N-acetylmuramate:L- 61.3 24 0.00081 22.1 5.5 45 15-61 25-70 (163)
74 3eme_A Rhodanese-like domain p 61.3 15 0.00051 20.9 4.3 43 25-78 55-97 (103)
75 3tp9_A Beta-lactamase and rhod 60.6 5 0.00017 29.4 2.4 44 20-67 20-63 (474)
76 2zo4_A Metallo-beta-lactamase 59.9 17 0.00057 24.5 4.9 41 26-66 30-73 (317)
77 2gcu_A Putative hydroxyacylglu 59.9 10 0.00034 25.4 3.7 39 26-67 27-65 (245)
78 3t4e_A Quinate/shikimate dehyd 58.8 24 0.00084 24.9 5.7 35 23-61 145-179 (312)
79 3g5j_A Putative ATP/GTP bindin 57.7 19 0.00066 21.0 4.4 32 25-59 87-119 (134)
80 3la8_A SMU.1229, putative puri 56.6 18 0.0006 25.9 4.6 47 18-64 98-149 (303)
81 2y8u_A Chitin deacetylase; hyd 56.0 20 0.00069 23.9 4.7 74 3-79 10-85 (230)
82 4eyb_A Beta-lactamase NDM-1; m 54.8 30 0.001 23.1 5.4 51 26-77 83-135 (270)
83 2cc0_A Acetyl-xylan esterase; 54.3 8.2 0.00028 24.9 2.4 52 26-79 5-57 (195)
84 1g2o_A Purine nucleoside phosp 53.7 47 0.0016 23.0 6.4 61 6-66 51-124 (268)
85 1qe5_A Pentosyltransferase; en 53.3 26 0.00088 24.3 5.0 60 6-66 53-123 (266)
86 3dfz_A SIRC, precorrin-2 dehyd 53.2 27 0.00092 23.6 5.0 39 18-61 23-61 (223)
87 4hl2_A Beta-lactamase NDM-1; s 53.0 15 0.00052 23.9 3.6 39 27-66 57-96 (243)
88 4ad9_A Lactb2, beta-lactamase- 52.7 23 0.00078 23.7 4.6 41 26-66 40-81 (289)
89 3tum_A Shikimate dehydrogenase 52.5 33 0.0011 23.6 5.5 34 24-61 123-156 (269)
90 3phb_E Purine nucleoside phosp 52.0 53 0.0018 23.6 6.6 50 17-66 101-155 (324)
91 2qed_A Hydroxyacylglutathione 51.9 18 0.00061 24.3 3.9 36 26-66 28-63 (258)
92 2ji4_A Phosphoribosyl pyrophos 51.4 36 0.0012 24.8 5.7 46 18-63 71-120 (379)
93 1tq1_A AT5G66040, senescence-a 51.4 12 0.00042 22.4 2.8 33 25-60 81-113 (129)
94 2fsx_A RV0390, COG0607: rhodan 51.3 13 0.00045 22.7 3.0 33 25-60 79-111 (148)
95 2k0z_A Uncharacterized protein 50.5 28 0.00097 20.0 4.3 29 25-56 55-83 (110)
96 2fhx_A SPM-1; metallo-beta-lac 49.2 34 0.0012 22.0 4.9 39 27-66 40-79 (246)
97 3to5_A CHEY homolog; alpha(5)b 48.4 22 0.00074 21.8 3.6 30 26-58 12-41 (134)
98 3eul_A Possible nitrate/nitrit 48.3 22 0.00074 20.8 3.5 28 25-55 14-41 (152)
99 1qxn_A SUD, sulfide dehydrogen 48.3 15 0.00051 22.3 2.8 44 25-78 81-124 (137)
100 2p18_A Glyoxalase II; metallop 48.3 14 0.00048 25.7 3.0 32 35-66 55-95 (311)
101 3pwz_A Shikimate dehydrogenase 46.9 47 0.0016 22.8 5.5 35 23-61 117-151 (272)
102 2ekd_A Hypothetical protein PH 46.6 11 0.00038 25.5 2.2 24 29-55 42-65 (207)
103 1vq2_A DCMP deaminase, deoxycy 46.0 25 0.00087 22.9 3.8 38 43-80 133-170 (193)
104 3kht_A Response regulator; PSI 45.7 41 0.0014 19.3 4.9 28 25-55 4-31 (144)
105 3ktb_A Arsenical resistance op 45.7 49 0.0017 20.1 5.8 53 27-83 5-77 (106)
106 1jjt_A IMP-1 metallo beta-lact 45.3 28 0.00094 22.4 3.9 39 27-66 42-80 (228)
107 3d1p_A Putative thiosulfate su 45.2 32 0.0011 20.5 4.0 45 25-79 90-134 (139)
108 1wv9_A Rhodanese homolog TT165 44.4 40 0.0014 18.7 4.2 29 27-59 54-82 (94)
109 3jyo_A Quinate/shikimate dehyd 44.1 55 0.0019 22.5 5.5 35 23-61 124-158 (283)
110 3tnl_A Shikimate dehydrogenase 43.7 57 0.002 23.0 5.6 35 23-61 151-185 (315)
111 1vk9_A Conserved hypothetical 43.1 21 0.0007 23.3 2.9 43 29-80 64-106 (151)
112 5nul_A Flavodoxin; electron tr 43.0 45 0.0015 19.6 4.4 34 24-57 77-111 (138)
113 3fbt_A Chorismate mutase and s 43.0 37 0.0013 23.6 4.5 34 24-61 120-153 (282)
114 3kwm_A Ribose-5-phosphate isom 43.0 26 0.00089 23.9 3.6 42 36-81 32-73 (224)
115 3iwh_A Rhodanese-like domain p 42.2 36 0.0012 19.7 3.8 44 25-79 55-98 (103)
116 3o8q_A Shikimate 5-dehydrogena 41.9 56 0.0019 22.5 5.3 35 23-61 123-157 (281)
117 3hhe_A Ribose-5-phosphate isom 41.3 17 0.00058 25.5 2.5 49 24-80 39-89 (255)
118 1vee_A Proline-rich protein fa 41.3 20 0.00067 21.6 2.6 32 25-59 73-104 (134)
119 3h1g_A Chemotaxis protein CHEY 40.4 32 0.0011 19.5 3.4 31 24-57 3-33 (129)
120 1k07_A FEZ-1 beta-lactamase; m 40.4 37 0.0013 22.2 4.0 38 27-66 34-74 (263)
121 1uar_A Rhodanese; sulfurtransf 39.4 48 0.0016 22.1 4.5 32 25-59 78-110 (285)
122 2w3z_A Putative deacetylase; P 39.3 36 0.0012 23.8 4.0 51 28-79 109-161 (311)
123 1tcv_A Purine-nucleoside phosp 39.0 96 0.0033 21.6 7.7 49 18-66 69-122 (287)
124 1sml_A Protein (penicillinase) 38.7 31 0.0011 22.7 3.4 37 28-66 48-87 (269)
125 3iog_A Beta-lactamase; hydrola 38.6 46 0.0016 21.0 4.2 40 26-66 31-71 (227)
126 3c19_A Uncharacterized protein 38.4 23 0.0008 23.7 2.7 28 32-61 19-47 (186)
127 1e0c_A Rhodanese, sulfurtransf 38.2 52 0.0018 21.8 4.5 31 25-58 80-111 (271)
128 3ozb_A Methylthioadenosine pho 37.9 91 0.0031 21.4 5.8 57 6-66 41-104 (259)
129 2wlr_A Putative thiosulfate su 37.1 62 0.0021 23.2 5.1 32 25-59 202-233 (423)
130 2vyo_A ECU11_0510, chitooligos 36.7 44 0.0015 22.4 4.0 52 27-79 27-81 (254)
131 2eg4_A Probable thiosulfate su 36.2 40 0.0014 21.9 3.7 30 25-58 183-212 (230)
132 4f67_A UPF0176 protein LPG2838 36.2 49 0.0017 22.9 4.2 33 24-59 179-211 (265)
133 2c71_A Glycoside hydrolase, fa 35.9 35 0.0012 22.3 3.3 52 27-79 6-59 (216)
134 3mm4_A Histidine kinase homolo 35.9 62 0.0021 20.3 4.5 32 24-58 59-90 (206)
135 3uw1_A Ribose-5-phosphate isom 35.9 23 0.00078 24.5 2.4 41 36-80 38-78 (239)
136 3l7o_A Ribose-5-phosphate isom 35.8 15 0.00052 25.1 1.5 40 36-80 24-67 (225)
137 1jr3_A DNA polymerase III subu 35.7 1E+02 0.0034 20.8 6.1 38 26-63 119-157 (373)
138 3m8t_A 'BLR6230 protein; subcl 35.7 50 0.0017 21.7 4.1 38 27-66 64-104 (294)
139 2p4s_A Purine nucleoside phosp 35.7 1.3E+02 0.0044 22.0 8.0 48 18-66 152-205 (373)
140 3ntd_A FAD-dependent pyridine 35.5 60 0.0021 23.7 4.8 31 25-59 523-553 (565)
141 2pjm_A Ribose-5-phosphate isom 35.4 25 0.00087 24.0 2.6 41 36-80 26-69 (226)
142 2lpm_A Two-component response 34.8 17 0.00057 22.1 1.5 47 26-80 8-55 (123)
143 4h86_A Peroxiredoxin type-2; o 34.6 44 0.0015 22.5 3.6 46 25-70 68-122 (199)
144 1sxj_E Activator 1 40 kDa subu 34.5 1.1E+02 0.0036 20.7 6.2 40 26-65 134-174 (354)
145 3r2u_A Metallo-beta-lactamase 34.3 23 0.00078 26.0 2.3 39 25-67 46-84 (466)
146 1vmk_A Purine nucleoside phosp 34.2 1.2E+02 0.004 21.1 7.1 49 18-66 74-127 (277)
147 1xm8_A Glyoxalase II; structur 34.0 30 0.001 23.1 2.8 36 26-66 22-57 (254)
148 2ftp_A Hydroxymethylglutaryl-C 33.9 46 0.0016 23.1 3.8 37 37-73 156-192 (302)
149 3hzu_A Thiosulfate sulfurtrans 33.9 71 0.0024 22.1 4.8 33 25-60 110-143 (318)
150 1qh5_A Glyoxalase II, protein 33.7 50 0.0017 22.1 3.9 36 26-66 22-57 (260)
151 2j13_A Polysaccharide deacetyl 33.6 22 0.00074 24.0 2.0 53 26-79 55-108 (247)
152 3g8q_A Predicted RNA-binding p 33.4 29 0.00099 24.7 2.6 40 38-80 63-102 (278)
153 3f6p_A Transcriptional regulat 33.3 65 0.0022 17.9 4.8 27 26-55 2-28 (120)
154 1dku_A Protein (phosphoribosyl 33.1 1.3E+02 0.0043 21.2 6.6 45 19-63 49-97 (317)
155 1urh_A 3-mercaptopyruvate sulf 33.0 45 0.0015 22.2 3.6 32 25-59 85-117 (280)
156 3aay_A Putative thiosulfate su 32.9 92 0.0031 20.6 5.1 32 25-59 76-108 (277)
157 3olh_A MST, 3-mercaptopyruvate 32.8 47 0.0016 22.8 3.7 35 25-59 106-140 (302)
158 3r2u_A Metallo-beta-lactamase 32.5 69 0.0024 23.4 4.7 32 25-60 335-366 (466)
159 3nm6_B MTA/SAH nucleosidase; h 32.5 1E+02 0.0035 19.9 5.9 47 20-66 36-82 (230)
160 2qgq_A Protein TM_1862; alpha- 32.3 46 0.0016 22.8 3.6 52 27-78 51-111 (304)
161 3gd5_A Otcase, ornithine carba 31.9 69 0.0023 23.0 4.5 38 21-62 152-189 (323)
162 1lk5_A D-ribose-5-phosphate is 31.7 39 0.0013 22.9 3.0 41 36-80 26-70 (229)
163 2vdc_G Glutamate synthase [NAD 31.3 98 0.0033 22.5 5.4 34 24-61 262-295 (456)
164 3flh_A Uncharacterized protein 30.9 45 0.0015 19.6 3.0 44 25-79 70-115 (124)
165 3d6n_B Aspartate carbamoyltran 30.9 89 0.003 22.0 4.9 42 21-64 141-182 (291)
166 3gl9_A Response regulator; bet 30.9 73 0.0025 17.8 4.8 26 27-55 3-28 (122)
167 3dp9_A MTA/SAH nucleosidase; v 30.7 1.1E+02 0.0038 19.8 5.9 48 20-67 34-81 (231)
168 2p97_A Hypothetical protein; p 30.7 16 0.00053 23.3 0.8 33 27-64 33-65 (201)
169 2y8b_A Metallo-B-lactamase; hy 30.3 74 0.0025 21.0 4.3 39 27-66 77-116 (265)
170 1uar_A Rhodanese; sulfurtransf 30.3 1.1E+02 0.0037 20.3 5.1 32 25-59 232-264 (285)
171 2iw0_A Chitin deacetylase; hyd 30.1 53 0.0018 22.0 3.5 52 26-79 42-99 (254)
172 2czd_A Orotidine 5'-phosphate 30.0 87 0.003 20.1 4.5 38 37-77 62-99 (208)
173 4ax1_B Metallo-beta-lactamase 30.0 45 0.0015 22.0 3.1 39 26-66 66-107 (303)
174 1o63_A ATP phosphoribosyltrans 29.8 21 0.00072 24.5 1.4 13 32-44 146-158 (219)
175 3don_A Shikimate dehydrogenase 29.6 47 0.0016 22.9 3.2 35 23-61 114-148 (277)
176 2x5n_A SPRPN10, 26S proteasome 29.2 75 0.0026 20.5 4.0 32 29-61 110-142 (192)
177 1k68_A Phytochrome response re 28.8 79 0.0027 17.5 4.1 27 26-55 2-28 (140)
178 3eod_A Protein HNR; response r 28.7 80 0.0027 17.5 3.9 29 24-55 5-33 (130)
179 1mqo_A Beta-lactamase II; alph 28.4 45 0.0015 21.3 2.8 39 27-66 50-89 (227)
180 1ve4_A ATP phosphoribosyltrans 28.4 23 0.00079 24.0 1.4 13 32-44 151-163 (206)
181 1m2x_A Class B carbapenemase B 28.2 85 0.0029 19.8 4.1 41 26-67 35-76 (223)
182 3khs_A Purine nucleoside phosp 28.0 1.5E+02 0.0052 20.6 7.1 49 18-66 64-117 (285)
183 1njg_A DNA polymerase III subu 28.0 1.1E+02 0.0036 18.7 6.0 38 26-63 126-164 (250)
184 2a8y_A 5'-methylthioadenosine 28.0 1.3E+02 0.0045 20.5 5.3 48 19-66 43-96 (270)
185 1qys_A TOP7; alpha-beta, novel 27.9 80 0.0027 18.6 3.6 21 42-62 33-53 (106)
186 3i2v_A Adenylyltransferase and 27.7 76 0.0026 18.1 3.6 47 27-83 73-125 (127)
187 2ef0_A Ornithine carbamoyltran 27.5 92 0.0031 22.0 4.5 38 21-62 149-186 (301)
188 3eei_A 5-methylthioadenosine n 27.3 1.1E+02 0.0039 19.7 4.7 45 20-64 37-81 (233)
189 1uj6_A Ribose 5-phosphate isom 27.3 54 0.0018 22.1 3.1 41 36-80 28-72 (227)
190 3h8v_A Ubiquitin-like modifier 27.3 93 0.0032 21.7 4.5 55 2-60 9-66 (292)
191 3uaw_A PNP, purine nucleoside 27.2 1.4E+02 0.0046 19.7 5.7 48 19-66 47-94 (235)
192 1j6u_A UDP-N-acetylmuramate-al 27.0 1.8E+02 0.0063 21.1 6.6 46 14-61 309-357 (469)
193 1rhs_A Sulfur-substituted rhod 26.8 72 0.0024 21.5 3.7 34 25-58 91-124 (296)
194 2hvw_A Deoxycytidylate deamina 26.7 28 0.00096 22.9 1.6 37 43-80 134-170 (184)
195 3vus_A Poly-beta-1,6-N-acetyl- 26.6 63 0.0021 22.0 3.4 33 28-62 68-100 (268)
196 1z7m_E ATP phosphoribosyltrans 26.6 20 0.0007 24.2 0.9 12 32-43 153-164 (208)
197 1pvv_A Otcase, ornithine carba 26.5 1.1E+02 0.0037 21.7 4.8 38 21-62 150-187 (315)
198 4ep1_A Otcase, ornithine carba 26.1 99 0.0034 22.3 4.5 38 21-62 174-211 (340)
199 2g6v_A Riboflavin biosynthesis 25.8 26 0.0009 25.6 1.4 49 31-80 98-148 (402)
200 3zxn_A RSBS, anti-sigma-factor 25.6 1.1E+02 0.0038 18.1 4.2 49 27-80 43-97 (123)
201 1ydn_A Hydroxymethylglutaryl-C 25.6 42 0.0014 23.0 2.4 38 36-73 151-188 (295)
202 1vpe_A Phosphoglycerate kinase 25.4 1.2E+02 0.0043 22.5 5.0 39 23-63 9-58 (398)
203 2egg_A AROE, shikimate 5-dehyd 25.1 1.5E+02 0.0053 20.2 5.3 35 23-61 138-172 (297)
204 3o38_A Short chain dehydrogena 25.0 64 0.0022 21.0 3.2 28 22-55 18-49 (266)
205 1zmr_A Phosphoglycerate kinase 25.0 1.3E+02 0.0044 22.3 5.0 39 23-63 10-59 (387)
206 1yt8_A Thiosulfate sulfurtrans 25.0 88 0.003 23.3 4.2 31 25-59 321-351 (539)
207 3hn7_A UDP-N-acetylmuramate-L- 24.9 1.6E+02 0.0056 21.8 5.7 47 15-63 375-423 (524)
208 1v6s_A Phosphoglycerate kinase 24.9 1.3E+02 0.0044 22.3 5.0 33 23-55 8-51 (390)
209 1php_A 3-phosphoglycerate kina 24.9 1.3E+02 0.0044 22.4 5.0 39 23-63 10-59 (394)
210 1p6o_A Cytosine deaminase; hyd 24.8 38 0.0013 21.6 1.9 36 44-80 96-131 (161)
211 2pfu_A Biopolymer transport EX 24.4 1E+02 0.0034 17.2 4.5 31 28-58 59-89 (99)
212 3pdi_B Nitrogenase MOFE cofact 24.4 1E+02 0.0034 22.8 4.4 37 23-63 310-346 (458)
213 1yt8_A Thiosulfate sulfurtrans 24.3 77 0.0026 23.6 3.8 32 25-59 62-93 (539)
214 3s2u_A UDP-N-acetylglucosamine 24.3 27 0.00094 24.4 1.2 17 42-58 19-35 (365)
215 2f8m_A Ribose 5-phosphate isom 24.2 24 0.00081 24.4 0.9 41 36-80 33-77 (244)
216 3o4v_A MTA/SAH nucleosidase; m 24.0 1.5E+02 0.0051 19.1 5.9 47 20-66 36-82 (234)
217 1lbq_A Ferrochelatase; rossman 23.8 66 0.0023 23.2 3.2 37 40-79 254-290 (362)
218 3h5i_A Response regulator/sens 23.8 56 0.0019 18.7 2.4 35 28-62 52-86 (140)
219 4a8t_A Putrescine carbamoyltra 23.7 95 0.0033 22.4 4.0 37 22-62 170-207 (339)
220 3u40_A Pnpase, purine nucleosi 23.5 1.7E+02 0.0057 19.4 6.1 49 19-67 56-104 (242)
221 1m0s_A Ribose-5-phosphate isom 23.4 38 0.0013 22.8 1.8 41 36-80 26-66 (219)
222 3kgk_A Arsenical resistance op 23.4 1.2E+02 0.0042 18.4 4.0 40 40-83 27-74 (110)
223 16pk_A PGK, 3-phosphoglycerate 23.3 1.4E+02 0.0049 22.3 5.0 39 23-63 9-58 (415)
224 3nhv_A BH2092 protein; alpha-b 23.3 1.3E+02 0.0044 18.1 6.0 43 25-78 71-115 (144)
225 2ayx_A Sensor kinase protein R 23.2 38 0.0013 22.3 1.7 30 23-55 8-37 (254)
226 1e5d_A Rubredoxin\:oxygen oxid 23.0 1E+02 0.0035 21.3 4.0 35 24-58 334-368 (402)
227 2fz5_A Flavodoxin; alpha/beta 22.9 1.2E+02 0.004 17.4 5.9 42 23-64 77-119 (137)
228 1a7t_A Metallo-beta-lactamase; 22.8 1.3E+02 0.0046 19.0 4.4 39 27-66 46-85 (232)
229 2vd3_A ATP phosphoribosyltrans 22.8 35 0.0012 24.2 1.5 13 32-44 158-170 (289)
230 1cdo_A Alcohol dehydrogenase; 22.4 2E+02 0.0067 19.9 5.8 48 25-80 192-239 (374)
231 4a8p_A Putrescine carbamoyltra 22.4 1E+02 0.0035 22.4 4.0 37 22-62 148-185 (355)
232 3lte_A Response regulator; str 22.4 1.1E+02 0.0037 16.9 4.7 26 26-54 6-31 (132)
233 1a5t_A Delta prime, HOLB; zinc 22.4 1.8E+02 0.0062 19.8 5.2 40 25-64 107-147 (334)
234 1h3d_A ATP-phosphoribosyltrans 22.2 34 0.0012 24.4 1.4 13 32-44 167-179 (299)
235 3ixl_A Amdase, arylmalonate de 21.9 54 0.0019 22.0 2.3 21 42-62 105-125 (240)
236 1qgu_B Protein (nitrogenase mo 21.8 1.3E+02 0.0045 22.5 4.6 36 24-63 358-393 (519)
237 4fs3_A Enoyl-[acyl-carrier-pro 21.8 1E+02 0.0035 20.2 3.7 27 23-55 3-34 (256)
238 2okg_A Central glycolytic gene 21.8 43 0.0015 22.6 1.8 26 36-61 62-88 (255)
239 2h1v_A Ferrochelatase; rossman 21.7 80 0.0027 22.0 3.2 28 41-68 92-119 (310)
240 2p10_A MLL9387 protein; putati 21.7 37 0.0013 24.2 1.5 47 33-79 101-147 (286)
241 2nyt_A Probable C->U-editing e 21.4 1.2E+02 0.0043 19.9 4.0 45 36-80 88-141 (190)
242 2h1v_A Ferrochelatase; rossman 21.4 82 0.0028 22.0 3.2 38 39-78 232-270 (310)
243 1nh8_A ATP phosphoribosyltrans 21.1 37 0.0013 24.3 1.4 13 32-44 172-184 (304)
244 3q6v_A Beta-lactamase; metallo 21.1 1.3E+02 0.0045 18.8 4.0 39 27-66 35-74 (233)
245 4f2g_A Otcase 1, ornithine car 21.1 1.4E+02 0.0049 21.1 4.5 38 21-62 149-186 (309)
246 3exc_X Uncharacterized protein 20.9 1.3E+02 0.0043 17.4 3.5 32 25-57 2-33 (91)
247 1kyq_A Met8P, siroheme biosynt 20.8 1.8E+02 0.0062 20.0 4.9 40 18-62 5-44 (274)
248 2chg_A Replication factor C sm 20.8 1.5E+02 0.005 17.8 6.4 38 25-62 101-139 (226)
249 3ca8_A Protein YDCF; two domai 20.8 1E+02 0.0034 21.2 3.6 37 24-60 112-150 (266)
250 2am1_A SP protein, UDP-N-acety 20.6 2E+02 0.0068 20.7 5.3 37 15-53 306-343 (454)
251 3gt7_A Sensor protein; structu 20.2 1.4E+02 0.0047 17.3 4.6 26 26-54 7-32 (154)
252 1mio_B Nitrogenase molybdenum 20.2 1.6E+02 0.0055 21.5 4.7 36 24-63 310-345 (458)
253 3tg1_B Dual specificity protei 20.2 1.2E+02 0.004 18.5 3.5 31 25-55 92-128 (158)
254 4a2c_A Galactitol-1-phosphate 20.0 2.1E+02 0.0072 19.3 5.8 33 25-61 160-192 (346)
255 2ong_A 4S-limonene synthase; m 20.0 12 0.0004 28.7 -1.5 16 30-45 293-308 (543)
No 1
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.73 E-value=2.4e-18 Score=123.52 Aligned_cols=66 Identities=29% Similarity=0.397 Sum_probs=61.7
Q ss_pred Ceeeec-cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCCcC
Q psy15570 17 PISVVG-DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEV 82 (84)
Q Consensus 17 ~~~i~g-~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~~i 82 (84)
.+++.| +++||+|+||||++|||+|+..+++.|+++|+++++++++|++|++++.++|.+++++++
T Consensus 195 ~~~l~g~~v~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v~s~~a~~~l~~~~i~~v 261 (284)
T 1u9y_A 195 QIAPKTLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEV 261 (284)
T ss_dssp -CCBSSCCCTTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEE
T ss_pred EEEecCccCCCCEEEEEecccCchHHHHHHHHHHHHCCCcEEEEEEEeEecCcHHHHHHHhCCCCEE
Confidence 566777 899999999999999999999999999999999999999999999999999999998875
No 2
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.73 E-value=3.4e-18 Score=124.52 Aligned_cols=67 Identities=34% Similarity=0.585 Sum_probs=61.7
Q ss_pred CCeeeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCCcC
Q psy15570 16 PPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEV 82 (84)
Q Consensus 16 ~~~~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~~i 82 (84)
..+.+.|+++||+|+|||||+|||+|+.++++.|+++|+++|++++|||+|++++.++|++++++++
T Consensus 207 ~~~~l~~~v~gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~~~i~~v 273 (317)
T 1dku_A 207 EVMNIVGNIEGKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIKEL 273 (317)
T ss_dssp --CEEESCCTTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEEEE
T ss_pred eEEEecccCCCCEEEEEecccCCCHHHHHHHHHHHHcCCcEEEEEEECcccChHHHHHHhhCCCCEE
Confidence 4577889999999999999999999999999999999999999999999999999999998887654
No 3
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=99.72 E-value=1.3e-17 Score=122.23 Aligned_cols=66 Identities=39% Similarity=0.592 Sum_probs=62.7
Q ss_pred CeeeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCCcC
Q psy15570 17 PISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEV 82 (84)
Q Consensus 17 ~~~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~~i 82 (84)
...+.|+++||+|+||||+++||+|+..+++.|+++|+++++++++|++|++++.++|++++++++
T Consensus 204 ~~~l~g~v~gk~viIVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~~~i~~v 269 (326)
T 3s5j_B 204 RMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAV 269 (326)
T ss_dssp CEEEESCCTTSEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHHSCCSEE
T ss_pred EEeccccCCCCEEEEEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhhCCCCEE
Confidence 467789999999999999999999999999999999999999999999999999999999998864
No 4
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=99.72 E-value=7.6e-18 Score=123.14 Aligned_cols=66 Identities=41% Similarity=0.693 Sum_probs=56.4
Q ss_pred CeeeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCCcC
Q psy15570 17 PISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEV 82 (84)
Q Consensus 17 ~~~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~~i 82 (84)
.+.+.|+++||+|+||||+++||+|+..+++.|+++|++++++++||++|++++.++|++++++++
T Consensus 207 ~~~i~g~v~gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~i~~v 272 (319)
T 3dah_A 207 VMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALDEL 272 (319)
T ss_dssp --------CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEEEEEEECCCTTHHHHHHTSSCSEE
T ss_pred EEEccccCCCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEEEEeecCChHHHHHHHhCCCCEE
Confidence 467788999999999999999999999999999999999999999999999999999999998874
No 5
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.70 E-value=3.3e-17 Score=121.88 Aligned_cols=67 Identities=79% Similarity=1.217 Sum_probs=61.9
Q ss_pred CCeeeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCCcC
Q psy15570 16 PPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEV 82 (84)
Q Consensus 16 ~~~~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~~i 82 (84)
..+.+.|+++||+|+||||+++||+|+..+++.|+++|++++++++||++|++++.++|++++++++
T Consensus 262 ~~~~l~g~v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~s~id~v 328 (379)
T 2ji4_A 262 PPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEV 328 (379)
T ss_dssp -CCCEESCCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCCTTHHHHHHHSSCCEE
T ss_pred cccccccCCCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEEEEeecCCcHHHHHHHhCCCCEE
Confidence 3346778999999999999999999999999999999999999999999999999999999988864
No 6
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.67 E-value=1.2e-16 Score=115.23 Aligned_cols=61 Identities=33% Similarity=0.533 Sum_probs=58.3
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCCcC
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDEV 82 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~~i 82 (84)
.++++||+|+||||+++||+|+..+++.|+++|+++++++++|++|++++.++| +++++++
T Consensus 198 ~~dv~gk~vliVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~s~~a~~~l-~s~i~~v 258 (286)
T 3lrt_A 198 NVDVNGKKLLIVDDIISTGGTIAKSSGLLREKGASKIYVSAVHGLFVNGSENKI-LQNADEI 258 (286)
T ss_dssp CCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHH-TTTCSEE
T ss_pred cccCCcCEEEEEeccccccHHHHHHHHHHHhCCCCEEEEEEEEeecCchHHHHH-HcCCCEE
Confidence 467899999999999999999999999999999999999999999999999999 9999875
No 7
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=99.44 E-value=1.9e-13 Score=96.55 Aligned_cols=78 Identities=15% Similarity=0.221 Sum_probs=64.1
Q ss_pred CCCCCcc-cCCCCCC----eeeecc-CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcC
Q psy15570 4 DVGVPQH-PAKEKPP----ISVVGD-VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEES 77 (84)
Q Consensus 4 ~~~~~~~-~~~~~~~----~~i~g~-v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~ 77 (84)
.+|+|+. .+++.+. ..+.|. ++|++|+||||++|||+|+.++++.|+++|++.+.+++++.....++.+++++.
T Consensus 121 ~L~~p~~~vrk~~k~~G~~~~ieg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~ 200 (243)
T 3dez_A 121 KMNLPLAYIRSKPKDHGAGNQIEGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKA 200 (243)
T ss_dssp HTTCCEEEECSSCC-----CCEESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHH
T ss_pred HcCCCEEEEEEeeccCCceeEEEeccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhc
Confidence 3678876 5554332 245565 689999999999999999999999999999999999999887777899999888
Q ss_pred CCCc
Q psy15570 78 PIDE 81 (84)
Q Consensus 78 ~i~~ 81 (84)
+++.
T Consensus 201 gi~~ 204 (243)
T 3dez_A 201 SVKL 204 (243)
T ss_dssp TCCE
T ss_pred CCCE
Confidence 7754
No 8
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=99.42 E-value=1.8e-13 Score=93.68 Aligned_cols=77 Identities=18% Similarity=0.202 Sum_probs=60.0
Q ss_pred CCCCcc-cCCCCC----Ceeeec-cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 5 VGVPQH-PAKEKP----PISVVG-DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 5 ~~~~~~-~~~~~~----~~~i~g-~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
+|+|+. .+++.. ..++.| .++||+|+||||++|||+|+..+++.|+++|++.+.+++.+...++++.+++.+++
T Consensus 90 l~~p~~~~rk~~~~~g~~~~i~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~ 169 (211)
T 2aee_A 90 MTLPFAYIRSKPKDHGAGNQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAG 169 (211)
T ss_dssp HTCCEEEECSSCC----CCSEESCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHT
T ss_pred hCCCEEEEEeecCCcCCcceecCCCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCC
Confidence 467755 333322 134556 47899999999999999999999999999999998877776665678999998777
Q ss_pred CCc
Q psy15570 79 IDE 81 (84)
Q Consensus 79 i~~ 81 (84)
++.
T Consensus 170 ~~~ 172 (211)
T 2aee_A 170 IKL 172 (211)
T ss_dssp CCE
T ss_pred CCE
Confidence 653
No 9
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=99.41 E-value=3.7e-13 Score=94.60 Aligned_cols=76 Identities=13% Similarity=0.236 Sum_probs=61.1
Q ss_pred CCCCcc-cCCCCC----Ceeeecc-CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 5 VGVPQH-PAKEKP----PISVVGD-VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 5 ~~~~~~-~~~~~~----~~~i~g~-v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
+|+|+. .+++.+ ...+.|. .+|++|+||||++|||+|+..+++.|+++|++.+.++++|....+++.+++.+.|
T Consensus 110 L~~p~~~vrk~~k~~G~~~~i~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~g 189 (234)
T 3m3h_A 110 MDLPMCYVRSKAKGHGKGNQIEGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAAN 189 (234)
T ss_dssp HTCCEEEEC---------CCEESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTT
T ss_pred cCCCEEEEEEeeccCCcceEEecccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcC
Confidence 578876 444432 2235565 4799999999999999999999999999999999999999987778999998887
Q ss_pred CC
Q psy15570 79 ID 80 (84)
Q Consensus 79 i~ 80 (84)
++
T Consensus 190 i~ 191 (234)
T 3m3h_A 190 VA 191 (234)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 10
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=99.40 E-value=2.1e-13 Score=90.92 Aligned_cols=56 Identities=21% Similarity=0.214 Sum_probs=50.9
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
++||+|+||||++|||+|+.++++.|+++|++.+.+++.|...+.++.++|...++
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~~~~~~l~~~~~ 173 (180)
T 1zn8_A 118 EPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPF 173 (180)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHHHTTSCE
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccCcchhhhhcCCce
Confidence 68999999999999999999999999999999999999999887788999874443
No 11
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.39 E-value=1.1e-12 Score=87.90 Aligned_cols=60 Identities=23% Similarity=0.214 Sum_probs=50.2
Q ss_pred eeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 19 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 19 ~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
.+.++++||+|+||||++|||+|+..+++.|+++|++.+.+++.... ..++.++|.+.++
T Consensus 99 ~i~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r-~~~~~~~l~~~g~ 158 (178)
T 2yzk_A 99 QVEGDPPKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDR-GEGAGELLARMGV 158 (178)
T ss_dssp CCBTCCCSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEC-CSSHHHHHHTTTC
T ss_pred eecccCCCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEc-CcCHHHHHHHcCC
Confidence 35678899999999999999999999999999999998888774332 2478889977665
No 12
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.37 E-value=1.3e-12 Score=88.16 Aligned_cols=56 Identities=9% Similarity=0.001 Sum_probs=50.5
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
.+||+|+||||++|||+|+.++++.|+++|++.+.+++.+.....++.++|.+.++
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~~~ 173 (197)
T 1y0b_A 118 SDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGY 173 (197)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTSTHHHHHHHTTC
T ss_pred CCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchhhhHHhcCC
Confidence 58999999999999999999999999999999999999887766689999987654
No 13
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=99.36 E-value=1.3e-12 Score=89.41 Aligned_cols=74 Identities=19% Similarity=0.246 Sum_probs=59.0
Q ss_pred CCCCcc-cCCCCC----CeeeeccC-CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 5 VGVPQH-PAKEKP----PISVVGDV-GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 5 ~~~~~~-~~~~~~----~~~i~g~v-~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
+|+|+. .+++.+ ..++.|.+ +||+|+||||++|||+|+..+++.|+++|++.+.+++.+.. ..++.+++.+.+
T Consensus 84 l~~p~~~~rk~~k~~g~~~~~~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~-~~~~~~~l~~~g 162 (205)
T 2wns_A 84 NQIPMLIRRKETKDYGTKRLVEGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDR-EQGGKDKLQAHG 162 (205)
T ss_dssp HTCCEEEECCTTTTSSSCCSEESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEEC-CSSHHHHHHTTT
T ss_pred HCcCEEEEecCcCccCccccccCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEc-CcchHHHHHHcC
Confidence 467755 333321 23456665 79999999999999999999999999999999999998886 468888988766
Q ss_pred C
Q psy15570 79 I 79 (84)
Q Consensus 79 i 79 (84)
+
T Consensus 163 ~ 163 (205)
T 2wns_A 163 I 163 (205)
T ss_dssp C
T ss_pred C
Confidence 5
No 14
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.36 E-value=8.4e-13 Score=90.10 Aligned_cols=56 Identities=25% Similarity=0.258 Sum_probs=49.7
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
.++++||+|+||||++|||.|+..+++.|+++|+++|.+++ +++++++.++|.+..
T Consensus 115 ~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~--~v~~~~~~~~l~~~~ 170 (208)
T 1wd5_A 115 KAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAV--PVASPEAVERLKARA 170 (208)
T ss_dssp CCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEE--EEBCHHHHHHHHTTS
T ss_pred CCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEE--EEcCHHHHHHhcccC
Confidence 35689999999999999999999999999999999999888 577778888887654
No 15
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=99.32 E-value=1.2e-12 Score=90.22 Aligned_cols=60 Identities=32% Similarity=0.362 Sum_probs=53.2
Q ss_pred eeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 19 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 19 ~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
.+.++++||+|+|+|||++||+|+..+++.|+++|+++++++++ ++++++++++.++..+
T Consensus 117 ~lp~~i~~~~VllvDd~l~TG~T~~~a~~~L~~~G~~~I~~~~l--v~~~~g~~~l~~~~p~ 176 (209)
T 1i5e_A 117 KLPSDVEERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFMCL--IAAPEGVKAVETAHPD 176 (209)
T ss_dssp ECCTTTTTSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEEECS--EECHHHHHHHHHHCTT
T ss_pred cCCCccCCCEEEEEcCCCcCHHHHHHHHHHHHHcCCCEEEEEEE--EECHHHHHHHHHhCcC
Confidence 34568999999999999999999999999999999999999987 6788999999886543
No 16
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=99.30 E-value=3.4e-12 Score=86.01 Aligned_cols=56 Identities=16% Similarity=0.193 Sum_probs=48.8
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
.+|++|+||||++|||+|+.++++.|+++|++.+.+++.......++.++|.+.++
T Consensus 124 ~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~g~ 179 (190)
T 2dy0_A 124 KPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGI 179 (190)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHHHHTTTC
T ss_pred CCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcchHHHHhhCCC
Confidence 48999999999999999999999999999999999988655444468899987665
No 17
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.27 E-value=5.4e-12 Score=81.81 Aligned_cols=43 Identities=26% Similarity=0.363 Sum_probs=40.2
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEec
Q psy15570 22 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG 64 (84)
Q Consensus 22 g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~ 64 (84)
++++||+|+||||++|||+|+..+++.|+++|++++.++++|.
T Consensus 79 ~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~ 121 (153)
T 1vdm_A 79 GDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAM 121 (153)
T ss_dssp SCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEE
T ss_pred cCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEe
Confidence 4578999999999999999999999999999999999999875
No 18
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=99.27 E-value=3.7e-12 Score=89.05 Aligned_cols=59 Identities=22% Similarity=0.249 Sum_probs=52.8
Q ss_pred eeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 19 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 19 ~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
.+.++++||.|+|+|||++||+|+..+++.|+++|++++++++. +++++++++|.++..
T Consensus 129 ~lp~di~gr~VilvDd~laTG~Tl~~ai~~L~~~G~~~I~~~~l--v~~~~g~~~l~~~~p 187 (221)
T 1o5o_A 129 KLPPLNDDKEVFLLDPMLATGVSSIKAIEILKENGAKKITLVAL--IAAPEGVEAVEKKYE 187 (221)
T ss_dssp ECCCCCTTCEEEEECSEESSSHHHHHHHHHHHHTTCCEEEEECS--EECHHHHHHHHHHCT
T ss_pred cCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEE--EeCHHHHHHHHHHCC
Confidence 34568999999999999999999999999999999999998885 778899999988654
No 19
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=99.26 E-value=1.5e-11 Score=85.96 Aligned_cols=60 Identities=12% Similarity=0.200 Sum_probs=52.3
Q ss_pred Ceeee-cc-CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhc
Q psy15570 17 PISVV-GD-VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEE 76 (84)
Q Consensus 17 ~~~i~-g~-v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~ 76 (84)
.+.+. +. .+|++|+||||++|||+|+.++++.|+++|++.+.+++.|.....++.++|.+
T Consensus 127 ~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~g~~~l~~ 188 (236)
T 1qb7_A 127 VMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSILSIPFLKAAEKIHS 188 (236)
T ss_dssp CCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECGGGCHHHHHHH
T ss_pred eEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEEEEcccccHHHHHhh
Confidence 44544 44 48999999999999999999999999999999999999998877788888874
No 20
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=99.25 E-value=6.8e-12 Score=86.93 Aligned_cols=57 Identities=14% Similarity=0.248 Sum_probs=51.9
Q ss_pred eeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 20 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 20 i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
+. +++||+|+|+|||++||+|+..+++.|+++|++++++++. ++++++.++|.++..
T Consensus 116 lp-di~~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~~~l--v~~~~g~~~l~~~~p 172 (208)
T 2e55_A 116 LP-ELKGKIVVILDPMLATGGTLEVALREILKHSPLKVKSVHA--IAAPEGLKRIEEKFK 172 (208)
T ss_dssp CC-CCBTSEEEEECSEESSSHHHHHHHHHHHTTCBSEEEEEEE--EECHHHHHHHHHHCT
T ss_pred CC-CCCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEE--EECHHHHHHHHHHCC
Confidence 45 8899999999999999999999999999999999999997 778899999987654
No 21
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=99.24 E-value=1.1e-11 Score=83.45 Aligned_cols=58 Identities=16% Similarity=0.155 Sum_probs=49.0
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCC--eEEEEEEeccCCCCHHHHhhcCCCCc
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAY--KIYVLATHGLLSSDAPLLIEESPIDE 81 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~--~v~~~~~h~~~s~~a~~~l~~~~i~~ 81 (84)
++||+|+||||++|||+|+.++++.|+++|++ .+.+++....-..++.++|.+.+++.
T Consensus 115 ~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~~g~~~l~~~~~~~ 174 (186)
T 1l1q_A 115 GPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEALKGREKVGQKCTRL 174 (186)
T ss_dssp CTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGCHHHHHTTTCCCE
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccCccHHHHHhhcCcce
Confidence 58999999999999999999999999999999 99988864432236788998777654
No 22
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=99.24 E-value=2.1e-11 Score=81.76 Aligned_cols=60 Identities=22% Similarity=0.276 Sum_probs=49.9
Q ss_pred eeecc-CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 19 SVVGD-VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 19 ~i~g~-v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
++.|. ++||+|+||||++|||+|+..+++.|+++|++.+.+++....- .++.+++++.++
T Consensus 106 ~~~g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~-~~g~~~l~~~g~ 166 (180)
T 2p1z_A 106 RIEGPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRA-TGAADVIAAEGL 166 (180)
T ss_dssp SEESSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-C-CCHHHHHHTTTC
T ss_pred hccCCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcC-cchHHHHHhcCC
Confidence 34554 6899999999999999999999999999999999998875543 477888876655
No 23
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.23 E-value=4.9e-12 Score=87.65 Aligned_cols=59 Identities=25% Similarity=0.300 Sum_probs=53.0
Q ss_pred eeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 19 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 19 ~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
++.++++||+|+|+|||++||+|+..+++.|+++|++++++++. +++++++++|.++..
T Consensus 116 ~lp~di~~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~~~l--v~~~~g~~~l~~~~p 174 (208)
T 1v9s_A 116 KLPPDIAERRAFLLDPMLATGGSASLALSLLKERGATGVKLMAI--LAAPEGLERIAKDHP 174 (208)
T ss_dssp ECCSCGGGSCEEEECSEESSSHHHHHHHHHHHHTTCCSCEEEEE--EECHHHHHHHHHHCT
T ss_pred cCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEE--EeCHHHHHHHHHHCC
Confidence 44568999999999999999999999999999999999999997 778899999987643
No 24
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.22 E-value=9.4e-12 Score=94.76 Aligned_cols=59 Identities=15% Similarity=0.220 Sum_probs=50.5
Q ss_pred Ceee-eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhh
Q psy15570 17 PISV-VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIE 75 (84)
Q Consensus 17 ~~~i-~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~ 75 (84)
.++. .++++||+|+||||+++||+|+..+++.|+++||++|+++++|+.+..++...+.
T Consensus 349 ~~~~~~~~v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~p~~~gi~ 408 (504)
T 1ecf_A 349 KLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGID 408 (504)
T ss_dssp TEEECGGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSCCCCSCCCSSCC
T ss_pred hhccccccCCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEecCcccCCeEEEE
Confidence 3544 4678999999999999999999999999999999999999999988755554443
No 25
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=99.22 E-value=9.6e-12 Score=86.17 Aligned_cols=57 Identities=26% Similarity=0.429 Sum_probs=51.6
Q ss_pred eeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 20 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 20 i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
+.++++||+|+|+|||++||+|+..+++.|+++|++++++++. ++++++.+++.++.
T Consensus 117 lp~di~~r~VilvDd~laTG~T~~~ai~~L~~~G~~~I~~~~l--v~~p~g~~~l~~~~ 173 (208)
T 2ehj_A 117 LVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVL--VAAPEGIAALEKAH 173 (208)
T ss_dssp CCSCGGGCEEEEEEEEESSCHHHHHHHHHHHHTTCCEEEEEEE--EECHHHHHHHHHHC
T ss_pred CCCccCCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEEEE--EeCHHHHHHHHHHC
Confidence 4568899999999999999999999999999999999999997 67889999998754
No 26
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.21 E-value=1.2e-11 Score=81.75 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=40.5
Q ss_pred Ceeeecc----CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 17 PISVVGD----VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 17 ~~~i~g~----v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
.+.+.++ ++||+|+||||++|||+|+.++++.|+++|++++.+++.
T Consensus 107 ~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l 156 (175)
T 1vch_A 107 VLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAV 156 (175)
T ss_dssp EEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred EEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEE
Confidence 4555554 489999999999999999999999999999999988874
No 27
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.20 E-value=1.6e-11 Score=81.77 Aligned_cols=44 Identities=23% Similarity=0.279 Sum_probs=39.6
Q ss_pred eeccCCCCEEEEEeccccchHHHHHHHHHHHHcC-CCeEEEEEEe
Q psy15570 20 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRG-AYKIYVLATH 63 (84)
Q Consensus 20 i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~g-a~~v~~~~~h 63 (84)
+.++++||+|+||||++|||+|+.++++.|+++| ++++.+++..
T Consensus 92 ~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~ 136 (181)
T 1a3c_A 92 IPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLV 136 (181)
T ss_dssp CSSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEE
T ss_pred cCcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence 3456889999999999999999999999999997 9999988853
No 28
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.19 E-value=2.8e-11 Score=81.29 Aligned_cols=42 Identities=19% Similarity=0.307 Sum_probs=39.0
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 22 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 22 g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
++++||+|+||||+++||+|+.++++.|+++|++++.+++..
T Consensus 94 ~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~ 135 (185)
T 2geb_A 94 IDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTIL 135 (185)
T ss_dssp SCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEE
T ss_pred CCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEE
Confidence 467899999999999999999999999999999999988853
No 29
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.18 E-value=3e-11 Score=80.80 Aligned_cols=42 Identities=19% Similarity=0.285 Sum_probs=38.8
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
.++++||+|+||||+++||+|+.++++.|+++|++++.+++.
T Consensus 90 ~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l 131 (183)
T 1hgx_A 90 KTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTL 131 (183)
T ss_dssp SSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEE
T ss_pred CCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEE
Confidence 346789999999999999999999999999999999998884
No 30
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.18 E-value=3.4e-11 Score=90.63 Aligned_cols=53 Identities=25% Similarity=0.305 Sum_probs=47.2
Q ss_pred CCeee-eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEE-----EeccCCC
Q psy15570 16 PPISV-VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA-----THGLLSS 68 (84)
Q Consensus 16 ~~~~i-~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~-----~h~~~s~ 68 (84)
..+.. .++++||+|+||||++|||+|+.++++.|+++||++|++++ +|+.|.+
T Consensus 327 ~~~~~~~~~v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~pp~~~~~~~g 385 (459)
T 1ao0_A 327 MKLSAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPIAHPCFYG 385 (459)
T ss_dssp SSEEECHHHHTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESSCCCCSCCCSC
T ss_pred hhcccccccCCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEecCCccccceee
Confidence 34554 35789999999999999999999999999999999999999 8888876
No 31
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.18 E-value=4.3e-11 Score=79.83 Aligned_cols=44 Identities=27% Similarity=0.406 Sum_probs=39.9
Q ss_pred eeeccCCCCEEEEEeccccchHHHHHHHHHHHHcC-CCeEEEEEE
Q psy15570 19 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRG-AYKIYVLAT 62 (84)
Q Consensus 19 ~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~g-a~~v~~~~~ 62 (84)
.+.++++||+|+||||++|||+|+.++++.|+++| ++++.+++.
T Consensus 89 ~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l 133 (181)
T 1ufr_A 89 RIPFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVL 133 (181)
T ss_dssp EECSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEE
T ss_pred ccCcCCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 34567899999999999999999999999999999 999998875
No 32
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.16 E-value=4.4e-11 Score=81.45 Aligned_cols=43 Identities=19% Similarity=0.278 Sum_probs=39.5
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
.++++||+|+||||+++||+|+.++++.|+++|++++.+++..
T Consensus 113 ~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~ 155 (205)
T 1yfz_A 113 DIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTIL 155 (205)
T ss_dssp CSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEE
T ss_pred CCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEE
Confidence 3468899999999999999999999999999999999998853
No 33
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=99.14 E-value=4.3e-11 Score=80.41 Aligned_cols=52 Identities=21% Similarity=0.098 Sum_probs=42.3
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHh
Q psy15570 23 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLI 74 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l 74 (84)
.++|++|+||||++|||+|+.++++.|+++|++++.+++....-..++.+++
T Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~~g~~~l 170 (187)
T 1g2q_A 119 IPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFLKGRSKL 170 (187)
T ss_dssp SCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCSSCCCCC
T ss_pred CCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccCcCchhhc
Confidence 3689999999999999999999999999999999998886543222334444
No 34
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.14 E-value=5.7e-11 Score=82.40 Aligned_cols=43 Identities=14% Similarity=0.198 Sum_probs=39.4
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
.++++||+|+||||+++||+|+..+++.|+++|+++|.+++..
T Consensus 98 ~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~ 140 (220)
T 1tc1_A 98 RHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLL 140 (220)
T ss_dssp SSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEE
T ss_pred CccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEE
Confidence 3457899999999999999999999999999999999998854
No 35
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.14 E-value=7.2e-11 Score=79.71 Aligned_cols=43 Identities=26% Similarity=0.264 Sum_probs=39.6
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
.++++||+|+||||+++||+|+..+++.|+++|++++.+++.+
T Consensus 90 ~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~ 132 (181)
T 2ywu_A 90 RLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALL 132 (181)
T ss_dssp CSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEE
T ss_pred CCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEE
Confidence 4568999999999999999999999999999999999998853
No 36
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.12 E-value=7.6e-11 Score=81.03 Aligned_cols=42 Identities=14% Similarity=0.229 Sum_probs=39.0
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 22 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 22 g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
++++||+|+||||+++||+|+.++++.|+++|++++.+++..
T Consensus 114 ~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~ 155 (211)
T 1pzm_A 114 DSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLL 155 (211)
T ss_dssp SCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEE
T ss_pred CCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEE
Confidence 457899999999999999999999999999999999998853
No 37
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=99.12 E-value=1.1e-10 Score=81.93 Aligned_cols=60 Identities=22% Similarity=0.251 Sum_probs=47.7
Q ss_pred CCCCcc-cCCCCC----Ceeeec-cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEec
Q psy15570 5 VGVPQH-PAKEKP----PISVVG-DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG 64 (84)
Q Consensus 5 ~~~~~~-~~~~~~----~~~i~g-~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~ 64 (84)
+++|+. .+++.+ ...+.| .++|++|+||||++|||+|+.++++.|+++|++.+.+++...
T Consensus 109 ~~~p~~~~RK~~k~~g~~~~i~g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvd 174 (232)
T 3mjd_A 109 IDMPYAFDRKEAKDHGEGGVFVGADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSID 174 (232)
T ss_dssp CCCBEEEECCC-------CCEEESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEE
T ss_pred CCCcEEEEEeecccCCCCceEeccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEE
Confidence 478876 555532 234566 679999999999999999999999999999999888888543
No 38
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=99.12 E-value=3.8e-11 Score=84.95 Aligned_cols=57 Identities=21% Similarity=0.230 Sum_probs=51.3
Q ss_pred eeccCCCCEEEEEeccccchHHHHHHHHHHHHcCC--CeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 20 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGA--YKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 20 i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga--~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
+..+++||.|+|+|||++||+|+..+++.|+++|+ +++++++. +++++++++|.+..
T Consensus 150 lp~di~~r~VilvDdmlaTG~T~~~ai~~L~~~G~~p~~I~~~~l--vaap~g~~~l~~~~ 208 (243)
T 1bd3_D 150 LPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNI--LAAPQGIERVFKEY 208 (243)
T ss_dssp CCTTGGGSEEEEECSEESSCHHHHHHHHHHHHHTCCGGGEEEEEE--EECHHHHHHHHHHC
T ss_pred CCcccCCCEEEEECCccccHHHHHHHHHHHHHcCCCcceEEEEEE--EeCHHHHHHHHHHC
Confidence 34578999999999999999999999999999999 89999987 67889999998754
No 39
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.09 E-value=1.5e-10 Score=80.17 Aligned_cols=42 Identities=17% Similarity=0.231 Sum_probs=39.0
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 22 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 22 g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
++++||+|+||||+++||+|+..+++.|+++|++++.+++..
T Consensus 130 ~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~ 171 (225)
T 2jbh_A 130 STLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLL 171 (225)
T ss_dssp GGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEE
T ss_pred cccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEE
Confidence 458999999999999999999999999999999999988853
No 40
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.08 E-value=1.7e-10 Score=77.63 Aligned_cols=42 Identities=21% Similarity=0.376 Sum_probs=39.0
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
.++++||+|+||||+++||+|+..+++.|+++|++++.+++.
T Consensus 86 ~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l 127 (177)
T 3ohp_A 86 DDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTL 127 (177)
T ss_dssp SSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEE
T ss_pred CcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEE
Confidence 356789999999999999999999999999999999998884
No 41
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.08 E-value=1.7e-10 Score=80.45 Aligned_cols=42 Identities=19% Similarity=0.263 Sum_probs=39.0
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 22 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 22 g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
++++||+|+||||+++||+|+.++++.|+++|++++.+++..
T Consensus 138 ~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~ 179 (233)
T 1fsg_A 138 SIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLV 179 (233)
T ss_dssp GGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEE
T ss_pred cccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEE
Confidence 357899999999999999999999999999999999988864
No 42
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.08 E-value=1.8e-10 Score=78.15 Aligned_cols=42 Identities=12% Similarity=0.146 Sum_probs=38.8
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 22 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 22 g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
++++||+|+||||+++||+|+..+++.|+++|++++.+++.+
T Consensus 90 ~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~ 131 (186)
T 3o7m_A 90 VNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLL 131 (186)
T ss_dssp SCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEE
T ss_pred CCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEE
Confidence 457899999999999999999999999999999999988853
No 43
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.06 E-value=2.3e-10 Score=78.91 Aligned_cols=42 Identities=21% Similarity=0.356 Sum_probs=38.9
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 22 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 22 g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
++++||+|+||||+++||+|+..+++.|+++|++++.+++..
T Consensus 112 ~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~ 153 (204)
T 3hvu_A 112 TSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLL 153 (204)
T ss_dssp SCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEE
T ss_pred ccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEE
Confidence 457899999999999999999999999999999999988853
No 44
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=99.05 E-value=3.9e-10 Score=78.01 Aligned_cols=60 Identities=13% Similarity=0.166 Sum_probs=46.5
Q ss_pred CCCCcc-cCCC-----CCCeeeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEec
Q psy15570 5 VGVPQH-PAKE-----KPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG 64 (84)
Q Consensus 5 ~~~~~~-~~~~-----~~~~~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~ 64 (84)
.++|+. .+++ ...+.....++|++|+||||++|||+|+..+++.|+++|++.+.+++...
T Consensus 98 ~~~p~~~~rk~~k~~g~~~~~~~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~d 163 (226)
T 2ps1_A 98 QNIQYAFNRKEAKDHGEGGIIVGSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALD 163 (226)
T ss_dssp TTCEEEEEEEEEESSTTCEEEEESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCCCEEEEechhhhcCCCceEecCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEE
Confidence 377865 2222 12233333679999999999999999999999999999999998888654
No 45
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.05 E-value=3.2e-10 Score=77.38 Aligned_cols=41 Identities=22% Similarity=0.335 Sum_probs=38.1
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHHcC-CCeEEEEEEe
Q psy15570 23 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRG-AYKIYVLATH 63 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~Tl~~~~~~L~~~g-a~~v~~~~~h 63 (84)
+++||+|+||||+++||+|+.++++.|+++| ++++++++..
T Consensus 109 ~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv 150 (201)
T 1w30_A 109 GIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLV 150 (201)
T ss_dssp CSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEE
T ss_pred cCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEE
Confidence 3789999999999999999999999999999 9999988853
No 46
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.03 E-value=3.8e-10 Score=77.81 Aligned_cols=43 Identities=12% Similarity=0.253 Sum_probs=39.3
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEec
Q psy15570 22 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG 64 (84)
Q Consensus 22 g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~ 64 (84)
.+++||+|+||||+++||+|+..+++.|+++|++++.+++...
T Consensus 122 ~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~ 164 (217)
T 1z7g_A 122 STLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLV 164 (217)
T ss_dssp GGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred cccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEE
Confidence 4689999999999999999999999999999999999888533
No 47
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.02 E-value=4.4e-10 Score=85.15 Aligned_cols=75 Identities=21% Similarity=0.312 Sum_probs=58.0
Q ss_pred CCCCcc-cCCCCCCe----eeeccC-CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 5 VGVPQH-PAKEKPPI----SVVGDV-GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 5 ~~~~~~-~~~~~~~~----~i~g~v-~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
+|+|+. .+++.+.+ .+.|.+ +|++|+||||++|||+|+..+++.|+++|++.+.+++.+... .++.+++.+.|
T Consensus 338 L~~p~~~~rk~~k~~g~~~~i~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~-~~g~~~l~~~g 416 (453)
T 3qw4_B 338 MNVPLIYPRREAKIYGTKAAIEGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRD-MGAKAFLNKLG 416 (453)
T ss_dssp HCCCEEEESSCC-------CEESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECS-SSHHHHHHHTT
T ss_pred hCCCEEEEEeeccccCcCceEecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECC-cchHHHHHhcC
Confidence 577866 55554322 355665 799999999999999999999999999999999999877753 57888888776
Q ss_pred CC
Q psy15570 79 ID 80 (84)
Q Consensus 79 i~ 80 (84)
+.
T Consensus 417 ~~ 418 (453)
T 3qw4_B 417 YD 418 (453)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 48
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.98 E-value=3.2e-10 Score=79.03 Aligned_cols=56 Identities=27% Similarity=0.400 Sum_probs=49.7
Q ss_pred eeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCC--CeEEEEEEeccCCCCHHHHhhcC
Q psy15570 19 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGA--YKIYVLATHGLLSSDAPLLIEES 77 (84)
Q Consensus 19 ~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga--~~v~~~~~h~~~s~~a~~~l~~~ 77 (84)
++. +++||.|+|+|||++||+|+..+++.|+++|+ +++.+++. +.++++++++.+.
T Consensus 123 ~lP-~i~~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~~~~~--vaa~egl~~l~~~ 180 (217)
T 3dmp_A 123 RLP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLAL--VAAPEGVQVFQDA 180 (217)
T ss_dssp ECC-CCTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEEECS--EECHHHHHHHHHH
T ss_pred cCC-CCCCCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEEEEEE--EeCHHHHHHHHHH
Confidence 355 88999999999999999999999999999999 88998886 5578899998764
No 49
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=98.94 E-value=1.3e-09 Score=74.82 Aligned_cols=58 Identities=26% Similarity=0.353 Sum_probs=45.6
Q ss_pred CCCcc-cCCCCC----Ceeeec-cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEec
Q psy15570 6 GVPQH-PAKEKP----PISVVG-DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG 64 (84)
Q Consensus 6 ~~~~~-~~~~~~----~~~i~g-~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~ 64 (84)
++|+. .+++.+ ..++.| .++| +|+||||++|||+|+.++++.|+++|++.+.+++...
T Consensus 92 ~~~~~~~rk~~~~~~~~~~~~g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~d 155 (213)
T 1lh0_A 92 DLPYCFNRKEAKDHGEGGSLVGSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLD 155 (213)
T ss_dssp CCBEEEECSSCCSSTTCSSEEESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCCEEEEEeccCccCCCCceeCCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEE
Confidence 67765 443322 234555 4789 9999999999999999999999999999998888644
No 50
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=98.93 E-value=1.1e-09 Score=77.73 Aligned_cols=41 Identities=20% Similarity=0.315 Sum_probs=38.4
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 23 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
+++||+|+||||+++||+|+..+++.|+++|++++.+++..
T Consensus 153 ~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~ 193 (250)
T 3ozf_A 153 CLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLF 193 (250)
T ss_dssp GGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEE
T ss_pred ccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEE
Confidence 46899999999999999999999999999999999998853
No 51
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=98.93 E-value=2.1e-09 Score=75.79 Aligned_cols=59 Identities=24% Similarity=0.295 Sum_probs=46.7
Q ss_pred CCCCcc-cCCCCC----Ceeeec-cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEec
Q psy15570 5 VGVPQH-PAKEKP----PISVVG-DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG 64 (84)
Q Consensus 5 ~~~~~~-~~~~~~----~~~i~g-~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~ 64 (84)
+++|+. .+++.+ ...+.| .++| +|+||||++|||+|+..+++.|+++|++.+.+++...
T Consensus 116 ~~vp~~~~RK~~k~~g~~~~i~G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvd 180 (238)
T 3n2l_A 116 VDTPYCFNRKEAKNHGEGGNLVGSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAID 180 (238)
T ss_dssp CCCBEEEECCC--------CEEESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCccEEEEeeccCCCCCCceEeccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEE
Confidence 578877 666543 234566 6789 9999999999999999999999999999888888544
No 52
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=98.90 E-value=2.4e-09 Score=72.45 Aligned_cols=42 Identities=26% Similarity=0.285 Sum_probs=39.0
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
..+++||+|+||||+++||.|+..+.+.|++.|++++..++.
T Consensus 90 ~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avL 131 (181)
T 3acd_A 90 RLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAAL 131 (181)
T ss_dssp CSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEE
T ss_pred CcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEE
Confidence 346889999999999999999999999999999999999884
No 53
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=98.88 E-value=3.1e-09 Score=73.63 Aligned_cols=43 Identities=21% Similarity=0.328 Sum_probs=37.5
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHHH--------cCC---------CeEEEEEEec
Q psy15570 22 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKD--------RGA---------YKIYVLATHG 64 (84)
Q Consensus 22 g~v~gk~vlivDDii~TG~Tl~~~~~~L~~--------~ga---------~~v~~~~~h~ 64 (84)
++++||+||||||+++||.|+..+++.|++ +|+ +++.+++.|.
T Consensus 99 ~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~ 158 (221)
T 2xbu_A 99 LDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHD 158 (221)
T ss_dssp CCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEE
T ss_pred ccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEe
Confidence 468999999999999999999999999997 886 5788887543
No 54
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=98.82 E-value=2.1e-09 Score=74.74 Aligned_cols=52 Identities=17% Similarity=0.287 Sum_probs=46.9
Q ss_pred cCCCC--EEEEEeccccchHHHHHHHHHHHHcCC-CeEEEEEEeccCCCCHHHHhhcC
Q psy15570 23 DVGGR--VAIMVDDMVDDVHSFVAAAEVLKDRGA-YKIYVLATHGLLSSDAPLLIEES 77 (84)
Q Consensus 23 ~v~gk--~vlivDDii~TG~Tl~~~~~~L~~~ga-~~v~~~~~h~~~s~~a~~~l~~~ 77 (84)
+++++ .|+|+|||++||+|+.++++.|++ |+ +++.+++. ++++++++++.+.
T Consensus 128 ~i~~~~~~VilvDp~laTG~T~~~ai~~L~~-G~p~~I~~~~~--vaa~~gl~~l~~~ 182 (216)
T 1xtt_A 128 DIRAKVDNVIIADPMIATASTMLKVLEEVVK-ANPKRIYIVSI--ISSEYGVNKILSK 182 (216)
T ss_dssp CCCTTTCEEEEECSEESSSHHHHHHHHHHGG-GCCSEEEEECS--EEEHHHHHHHHHH
T ss_pred CccCCcceEEEEcCCccchHHHHHHHHHHHh-CCCCeEEEEEE--ecCHHHHHHHHHH
Confidence 78899 999999999999999999999999 98 88888885 6678899998764
No 55
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=98.79 E-value=4.2e-09 Score=75.69 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=37.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEec
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG 64 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~ 64 (84)
.+|++|+||||++|||+|+..+++.|+++|++.+.+++...
T Consensus 194 ~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvd 234 (291)
T 1o57_A 194 KTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVE 234 (291)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEE
T ss_pred CCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEE
Confidence 58999999999999999999999999999999998887543
No 56
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=98.54 E-value=1.1e-08 Score=71.51 Aligned_cols=41 Identities=20% Similarity=0.304 Sum_probs=35.0
Q ss_pred ccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCH
Q psy15570 22 GDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDA 70 (84)
Q Consensus 22 g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a 70 (84)
++++||+|+||||+++||.|+..+++.|++ +++++ ++.+++
T Consensus 114 ~~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vav---Ll~k~~ 154 (230)
T 1dqn_A 114 QLKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICS---CFVKDV 154 (230)
T ss_dssp HHHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEE---EEESCH
T ss_pred cCCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEE---EEECCc
Confidence 468999999999999999999999999987 66665 566665
No 57
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=98.52 E-value=2e-08 Score=65.55 Aligned_cols=29 Identities=31% Similarity=0.391 Sum_probs=27.2
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHH
Q psy15570 23 DVGGRVAIMVDDMVDDVHSFVAAAEVLKD 51 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~Tl~~~~~~L~~ 51 (84)
+++||+|+||||+++||+|+..+++.|++
T Consensus 78 ~~~gk~VliVDDii~TG~Tl~~a~~~l~~ 106 (152)
T 1nul_A 78 EGDGEGFIVIDDLVDTGGTAVAIREMYPK 106 (152)
T ss_dssp SSCCTTEEEEEEEECTTSSHHHHHHHCTT
T ss_pred CCCcCEEEEEEeecCchHHHHHHHHHHhh
Confidence 47899999999999999999999999986
No 58
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=77.82 E-value=3.2 Score=28.42 Aligned_cols=48 Identities=21% Similarity=0.219 Sum_probs=34.6
Q ss_pred eeccCCCCEEEEEecccc--------chHHHHHHHHHHHHcCCCeEEEEEEeccCC
Q psy15570 20 VVGDVGGRVAIMVDDMVD--------DVHSFVAAAEVLKDRGAYKIYVLATHGLLS 67 (84)
Q Consensus 20 i~g~v~gk~vlivDDii~--------TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s 67 (84)
++.+-.++.++|||-..+ +........+.+++.|.+..+++.||.-+.
T Consensus 21 li~~~~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~~i~~Il~TH~H~D 76 (298)
T 4efz_A 21 LLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHAD 76 (298)
T ss_dssp EEECTTTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTCEEEEEECSSCCSS
T ss_pred EEEECCCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCCcceEEEECCCchh
Confidence 344445678889888764 225667778889999988778888998654
No 59
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=75.87 E-value=4.9 Score=23.37 Aligned_cols=45 Identities=11% Similarity=-0.004 Sum_probs=33.3
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
+++.++++++ +|..-..++..|++.|.+.++. + ..++....+.+.
T Consensus 51 ~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~~------l-~GG~~~W~~~g~ 95 (106)
T 3hix_A 51 KSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVSE------L-KGGLAAWKAIGG 95 (106)
T ss_dssp TTSCEEEECS---SHHHHHHHHHHHHHTTCSCEEE------C-TTHHHHHHHTTC
T ss_pred CCCeEEEEEC---CCChHHHHHHHHHHcCCcCEEE------e-cCCHHHHHHCCC
Confidence 4678888864 7888888999999999987653 2 356666666553
No 60
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=74.79 E-value=5.7 Score=24.55 Aligned_cols=44 Identities=11% Similarity=0.030 Sum_probs=32.3
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
+++.++++++ +|..-..++..|++.|...++. + .+++..+.+.|
T Consensus 55 ~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~v~~------l-~GG~~~W~~~g 98 (141)
T 3ilm_A 55 KSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVSE------L-KGGLAAWKAIG 98 (141)
T ss_dssp TTSEEEEECS---SHHHHHHHHHHHHHTTCCSEEE------C-TTHHHHHHHTT
T ss_pred CCCeEEEEEC---CChHHHHHHHHHHHcCCCCEEE------e-cCHHHHHHHCC
Confidence 4678888866 7888889999999999987653 2 34555555544
No 61
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=73.96 E-value=2 Score=27.46 Aligned_cols=36 Identities=25% Similarity=0.292 Sum_probs=24.4
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEecc
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGL 65 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~ 65 (84)
++..+||| +|.......+.|++.|.+.-.++.||.-
T Consensus 23 ~~~~iLiD----~G~~~~~l~~~l~~~g~~i~~ii~TH~H 58 (210)
T 2xf4_A 23 TRLAALVD----PGGDAEKIKQEVDASGVTLMQILLTHGH 58 (210)
T ss_dssp TCEEEEEC----CCSCHHHHHHHHHHHTCEEEEEECSCSC
T ss_pred CCcEEEEc----CCCCHHHHHHHHHHcCCceeEEEECCCC
Confidence 34556665 5555566677888888766677788874
No 62
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=73.28 E-value=9.4 Score=21.00 Aligned_cols=33 Identities=12% Similarity=0.016 Sum_probs=26.9
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 60 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~ 60 (84)
+++.++++.+ +|..-..++..|++.|.+.++.+
T Consensus 40 ~~~~ivv~C~---~g~rs~~aa~~L~~~G~~~v~~l 72 (85)
T 2jtq_A 40 KNDTVKVYCN---AGRQSGQAKEILSEMGYTHVENA 72 (85)
T ss_dssp TTSEEEEEES---SSHHHHHHHHHHHHTTCSSEEEE
T ss_pred CCCcEEEEcC---CCchHHHHHHHHHHcCCCCEEec
Confidence 5788888874 68888889999999999877654
No 63
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=70.38 E-value=11 Score=21.39 Aligned_cols=44 Identities=5% Similarity=0.011 Sum_probs=32.4
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
+++.++++. .+|..-..++..|++.|. .++.+ ..+.....+.|.
T Consensus 55 ~~~~ivvyC---~~g~rs~~a~~~L~~~G~-~v~~l-------~GG~~~W~~~g~ 98 (100)
T 3foj_A 55 DNETYYIIC---KAGGRSAQVVQYLEQNGV-NAVNV-------EGGMDEFGDEGL 98 (100)
T ss_dssp TTSEEEEEC---SSSHHHHHHHHHHHTTTC-EEEEE-------TTHHHHHCSSSC
T ss_pred CCCcEEEEc---CCCchHHHHHHHHHHCCC-CEEEe-------cccHHHHHHcCC
Confidence 478888886 688888899999999998 55432 355666666553
No 64
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=67.79 E-value=9.2 Score=22.25 Aligned_cols=43 Identities=16% Similarity=0.044 Sum_probs=31.5
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
+++.++++. .+|..-..++..|++.|. .++.+ ..+.....+.+
T Consensus 54 ~~~~ivvyC---~~G~rs~~aa~~L~~~G~-~v~~l-------~GG~~~W~~~~ 96 (108)
T 3gk5_A 54 RDKKYAVIC---AHGNRSAAAVEFLSQLGL-NIVDV-------EGGIQSWIEEG 96 (108)
T ss_dssp TTSCEEEEC---SSSHHHHHHHHHHHTTTC-CEEEE-------TTHHHHHHHTT
T ss_pred CCCeEEEEc---CCCcHHHHHHHHHHHcCC-CEEEE-------cCcHHHHHHcC
Confidence 467888887 688888889999999998 65532 34566665544
No 65
>3odg_A Xanthosine phosphorylase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; HET: XAN; 1.64A {Yersinia pseudotuberculosis} PDB: 1yqq_A* 1yqu_A* 1yr3_A*
Probab=67.00 E-value=7.1 Score=27.61 Aligned_cols=61 Identities=13% Similarity=0.067 Sum_probs=39.9
Q ss_pred CCCcc-cCCCC-------CCeeeeccCCCCEEEEEeccccc--h---HHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 6 GVPQH-PAKEK-------PPISVVGDVGGRVAIMVDDMVDD--V---HSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 6 ~~~~~-~~~~~-------~~~~i~g~v~gk~vlivDDii~T--G---~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
.+||. +++.. ..-.+.|.+.|+.|+++--..=. | ......+..|++.|++.+....+-|-+
T Consensus 56 ~~py~~ip~fp~stv~gh~g~l~~G~l~G~~Vv~l~Gr~H~~eg~~~~~~~a~i~~l~~lGv~~II~tgaaGgl 129 (287)
T 3odg_A 56 TISYADIPGFPVSSVHGHAGELVLGDLCGVPVMCMKGRGHFYEGKGMSIMTNPVRTFKLMGCEFLFCTNAAGSL 129 (287)
T ss_dssp EEEGGGSTTCCCCSSTTCCCEEEEEEETTEEEEEEESCCCGGGTTCGGGGHHHHHHHHHTTCSEEEEEEEEEES
T ss_pred EeccccCCCCCCCccCCCCceEEEEEECCEEEEEEECCCcccCCCCHHHHHHHHHHHHHcCCCEEEEecceecc
Confidence 45666 44444 23456788999999998722110 1 135677789999999998776655533
No 66
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=66.64 E-value=7 Score=22.60 Aligned_cols=32 Identities=19% Similarity=0.093 Sum_probs=25.6
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYV 59 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~ 59 (84)
+++.++++.+ +|..-..++..|++.|.+.++.
T Consensus 57 ~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~~ 88 (108)
T 1gmx_A 57 FDTPVMVMCY---HGNSSKGAAQYLLQQGYDVVYS 88 (108)
T ss_dssp TTSCEEEECS---SSSHHHHHHHHHHHHTCSSEEE
T ss_pred CCCCEEEEcC---CCchHHHHHHHHHHcCCceEEE
Confidence 4778888865 6777788899999999987763
No 67
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=64.04 E-value=21 Score=25.49 Aligned_cols=44 Identities=14% Similarity=0.234 Sum_probs=32.5
Q ss_pred eeeccCCCCEEEEEeccccch-HH---HHHHHHHHHHcCCCeEEEEEE
Q psy15570 19 SVVGDVGGRVAIMVDDMVDDV-HS---FVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 19 ~i~g~v~gk~vlivDDii~TG-~T---l~~~~~~L~~~ga~~v~~~~~ 62 (84)
++...+.|++|+|+=+....- .. +.-.+.++++.+|+++.++..
T Consensus 47 ~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA~rIt~ViP 94 (319)
T 3dah_A 47 EIQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALKRASAGRITAAIP 94 (319)
T ss_dssp EECSCCBTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTBSEEEEEES
T ss_pred EECCCcCCCeEEEEccCCCCCcHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 445678999999997765442 22 344678999999999988874
No 68
>3fuc_A Purine nucleoside phosphorylase; recombinant, glycosyltransferase, transferase, 9-deazaguanine, multisubstrate analogue inhibitors, nucleoside-binding; HET: 9D9 9DG; 1.45A {Bos taurus} SCOP: c.56.2.1 PDB: 1b8n_A* 1b8o_A* 2ai2_A* 1v48_A* 2ai1_A* 2ai3_A* 1lvu_A* 1lv8_A* 1a9o_A 1a9p_A* 1a9s_A* 1fxu_A* 2qpl_A* 1a9t_A* 3pnp_A 1pbn_A 4pnp_A 1a9q_A* 1a9r_A* 1vfn_A* ...
Probab=61.86 E-value=11 Score=26.58 Aligned_cols=50 Identities=20% Similarity=0.241 Sum_probs=33.3
Q ss_pred CeeeeccCCCCEEEEEecccc-----chHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 17 PISVVGDVGGRVAIMVDDMVD-----DVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 17 ~~~i~g~v~gk~vlivDDii~-----TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
.-.+.|.++|+.|+++--..- +=+.+...++.+++.|++.+....+-+-+
T Consensus 66 g~l~~G~l~G~~Vv~~~Gr~H~yeg~~~~~v~~~~~~l~~lGv~~iI~tgaaGgl 120 (284)
T 3fuc_A 66 GRLVFGILNGRACVMMQGRFHMYEGYPFWKVTFPVRVFRLLGVETLVVTNAAGGL 120 (284)
T ss_dssp CEEEEEEETTEEEEEEESCCCGGGTCCHHHHTHHHHHHHHHTCCEEEEEEEEEEC
T ss_pred ccEEEEEECCEEEEEEeCCccccCCCChHHHHHHHHHHHHcCCCEEEEecceecC
Confidence 345678899999999831110 01344556789999999998776655533
No 69
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=61.79 E-value=26 Score=24.32 Aligned_cols=59 Identities=14% Similarity=0.243 Sum_probs=38.6
Q ss_pred CCCCCcc---cCCCCC---CeeeeccCCCCEEEEEeccccchHH---HHHHHHHHHHcCCCeEEEEEE
Q psy15570 4 DVGVPQH---PAKEKP---PISVVGDVGGRVAIMVDDMVDDVHS---FVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 4 ~~~~~~~---~~~~~~---~~~i~g~v~gk~vlivDDii~TG~T---l~~~~~~L~~~ga~~v~~~~~ 62 (84)
.+|+|+. ....++ ..++...+.|++|+++-.....-.. +.-.++++++.+|+++.++..
T Consensus 19 ~l~~~l~~~~~~~F~dGE~~v~i~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~~~~~a~~i~~v~P 86 (284)
T 1u9y_A 19 LLNTKLTRVEYKRFPDNEIYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDALRDEGVKKITLVAP 86 (284)
T ss_dssp HTTCCEECEEEEECTTCCEEEEECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHHTTTCCEEEEECS
T ss_pred HhCCeeeeeEEEECCCCCEEEEeCCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCceEEEEec
Confidence 4677755 222222 2345567899999999887643223 333568999999999887774
No 70
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=61.52 E-value=2.5 Score=27.12 Aligned_cols=37 Identities=14% Similarity=0.221 Sum_probs=24.2
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLS 67 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s 67 (84)
+..+|||-- .......+.+++.|.+.-.++.||.-+.
T Consensus 22 ~~~iliD~G----~~~~~l~~~l~~~g~~i~~vilTH~H~D 58 (207)
T 2zwr_A 22 EGPVLIDPG----DEPEKLLALFQTTGLIPLAILLTHAHFD 58 (207)
T ss_dssp TEEEEECCC----SCHHHHHHHHHHHTCCCSCEECSCCCGG
T ss_pred CcEEEEeCC----CCHHHHHHHHHHcCCcccEEEECCCChH
Confidence 456666654 4445566778888866557888998543
No 71
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=61.51 E-value=40 Score=24.20 Aligned_cols=59 Identities=12% Similarity=0.125 Sum_probs=38.3
Q ss_pred CCCCCcc---cCCCCC---CeeeeccCCCCEEEEEeccccc-hHH---HHHHHHHHHHcCCCeEEEEEE
Q psy15570 4 DVGVPQH---PAKEKP---PISVVGDVGGRVAIMVDDMVDD-VHS---FVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 4 ~~~~~~~---~~~~~~---~~~i~g~v~gk~vlivDDii~T-G~T---l~~~~~~L~~~ga~~v~~~~~ 62 (84)
.+|+|++ ....++ ..++...+.|++|+|+=..... -.. +.-.+.++++++|+++.++..
T Consensus 22 ~lg~~l~~~~~~~F~dGE~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA~rIt~ViP 90 (326)
T 3s5j_B 22 RLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASASRVTAVIP 90 (326)
T ss_dssp HTTCCCCCEEEEECTTSCEEEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEES
T ss_pred HhCCceeeeEEeECCCCCEEEEECCCcCCCcEEEEecCCCCccHHHHHHHHHHHHHHhcCCcEEEEecc
Confidence 4677765 222222 2345567899999999766543 122 334568899999999988774
No 72
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=61.38 E-value=16 Score=21.83 Aligned_cols=44 Identities=9% Similarity=-0.037 Sum_probs=32.1
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
+++.+++++. +|..-..++..|++.|.+.|+.+ ..+...+.+.+
T Consensus 85 ~~~~ivvyC~---~G~rs~~a~~~L~~~G~~~v~~l-------~GG~~~W~~~g 128 (139)
T 2hhg_A 85 EDKKFVFYCA---GGLRSALAAKTAQDMGLKPVAHI-------EGGFGAWRDAG 128 (139)
T ss_dssp SSSEEEEECS---SSHHHHHHHHHHHHHTCCSEEEE-------TTHHHHHHHTT
T ss_pred CCCeEEEECC---CChHHHHHHHHHHHcCCCCeEEe-------cCCHHHHHHCC
Confidence 5788999874 57777788999999999876643 24566665554
No 73
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=61.34 E-value=24 Score=22.12 Aligned_cols=45 Identities=20% Similarity=0.349 Sum_probs=29.8
Q ss_pred CCCeeeeccCCCCEEEEEeccccchHHHHHHHHHHHHc-CCCeEEEEE
Q psy15570 15 KPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDR-GAYKIYVLA 61 (84)
Q Consensus 15 ~~~~~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~-ga~~v~~~~ 61 (84)
...+++++... .+.++||---+-.++.++++.|++. ..+++.++.
T Consensus 25 ~~R~E~i~~~~--g~~vi~DyaHnP~si~a~l~al~~~~~~~riivvf 70 (163)
T 3mvn_A 25 QRRLEVKGVVN--NITVYDDFAHHPTAITATIDALRAKVGQQRILAVL 70 (163)
T ss_dssp --CCEEEEEET--TEEEEEECCCSHHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred CCCeEEEecCC--CcEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 34566665432 3678888777999999999999974 445555443
No 74
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=61.27 E-value=15 Score=20.90 Aligned_cols=43 Identities=9% Similarity=0.000 Sum_probs=31.2
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
+++.++++. .+|..-..++..|++.|. .++.+ ..+.+...+.|
T Consensus 55 ~~~~iv~yC---~~g~rs~~a~~~L~~~G~-~v~~l-------~GG~~~W~~~g 97 (103)
T 3eme_A 55 KNEIYYIVC---AGGVRSAKVVEYLEANGI-DAVNV-------EGGMHAWGDEG 97 (103)
T ss_dssp TTSEEEEEC---SSSSHHHHHHHHHHTTTC-EEEEE-------TTHHHHHCSSS
T ss_pred CCCeEEEEC---CCChHHHHHHHHHHHCCC-CeEEe-------CCCHHHHHHCC
Confidence 578888887 578777888999999998 55422 35666666554
No 75
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=60.62 E-value=5 Score=29.38 Aligned_cols=44 Identities=20% Similarity=0.096 Sum_probs=31.2
Q ss_pred eeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCC
Q psy15570 20 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLS 67 (84)
Q Consensus 20 i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s 67 (84)
++++..++.++|||.-. ......+.+++.|.+...++.||.-+.
T Consensus 20 li~~~~~~~~ilID~g~----~~~~~~~~l~~~~~~i~~Il~TH~H~D 63 (474)
T 3tp9_A 20 LVGCQETGEACVIDPAR----DVEPYLLTAKREGLRIVAALETHIHAD 63 (474)
T ss_dssp EEEETTTCEEEEESCCS----CCHHHHHHHHHHTCEEEEEECSSCCSS
T ss_pred EEEECCCCEEEEEcCCC----ChHHHHHHHHHcCCeeEEEEcCcCchh
Confidence 34444567788888553 355677788888887778889998764
No 76
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=59.95 E-value=17 Score=24.54 Aligned_cols=41 Identities=20% Similarity=0.078 Sum_probs=28.8
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCC---eEEEEEEeccC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAY---KIYVLATHGLL 66 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~---~v~~~~~h~~~ 66 (84)
++.++|||--.++..+.....+.|++.|.. .-.++.||.-.
T Consensus 30 ~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~ 73 (317)
T 2zo4_A 30 AGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHP 73 (317)
T ss_dssp TTEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSH
T ss_pred CCceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCC
Confidence 456788887776655555667788888854 34788899854
No 77
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=59.94 E-value=10 Score=25.35 Aligned_cols=39 Identities=18% Similarity=0.304 Sum_probs=27.2
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLS 67 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s 67 (84)
++.++|||-..++ .....+.|++.|.+...++.||.-..
T Consensus 27 ~~~~ilID~g~~~---~~~~~~~l~~~g~~i~~Il~TH~H~D 65 (245)
T 2gcu_A 27 DKPALLIDPVDKT---VDRDLKLIDELGLKLIYAMNTHVHAD 65 (245)
T ss_dssp TCEEEEESCBGGG---HHHHHHHHHHHTCEEEEEECSSCCSS
T ss_pred CCcEEEEeCCCch---HHHHHHHHHHCCCeeeEEEeCCCChh
Confidence 4567787776643 34556778888877667888998654
No 78
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=58.77 E-value=24 Score=24.92 Aligned_cols=35 Identities=14% Similarity=0.206 Sum_probs=29.6
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEE
Q psy15570 23 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 61 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~ 61 (84)
+++||+++|+ -+|++-..++..|.+.|++++.++.
T Consensus 145 ~l~gk~~lVl----GAGGaaraia~~L~~~G~~~v~v~n 179 (312)
T 3t4e_A 145 DMRGKTMVLL----GAGGAATAIGAQAAIEGIKEIKLFN 179 (312)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CcCCCEEEEE----CcCHHHHHHHHHHHHcCCCEEEEEE
Confidence 3678999886 5799999999999999999887765
No 79
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=57.71 E-value=19 Score=20.96 Aligned_cols=32 Identities=9% Similarity=0.054 Sum_probs=24.6
Q ss_pred CC-CEEEEEeccccchHHHHHHHHHHHHcCCCeEEE
Q psy15570 25 GG-RVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYV 59 (84)
Q Consensus 25 ~g-k~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~ 59 (84)
++ +.++++.+ .+|..-..++..|++.|. .++.
T Consensus 87 ~~~~~ivvyC~--~~G~rs~~a~~~L~~~G~-~v~~ 119 (134)
T 3g5j_A 87 LNYDNIVIYCA--RGGMRSGSIVNLLSSLGV-NVYQ 119 (134)
T ss_dssp TTCSEEEEECS--SSSHHHHHHHHHHHHTTC-CCEE
T ss_pred cCCCeEEEEEC--CCChHHHHHHHHHHHcCC-ceEE
Confidence 45 88888764 477777888999999998 5553
No 80
>3la8_A SMU.1229, putative purine nucleoside phosphorylase; PUNA, glycosyltransferase, transferase; 1.80A {Streptococcus mutans} PDB: 3lba_A*
Probab=56.57 E-value=18 Score=25.94 Aligned_cols=47 Identities=15% Similarity=0.300 Sum_probs=31.6
Q ss_pred eeeeccCCCCEEEEEecccc-----chHHHHHHHHHHHHcCCCeEEEEEEec
Q psy15570 18 ISVVGDVGGRVAIMVDDMVD-----DVHSFVAAAEVLKDRGAYKIYVLATHG 64 (84)
Q Consensus 18 ~~i~g~v~gk~vlivDDii~-----TG~Tl~~~~~~L~~~ga~~v~~~~~h~ 64 (84)
-.+.|.+.|+.|+++--..- +=+.+...+..+++.|++.+....+-+
T Consensus 98 ~l~~G~l~G~~Vv~~~Gr~H~yEG~~p~~V~~~i~~l~~lGv~~II~t~aaG 149 (303)
T 3la8_A 98 KLIYGELAGRKVLALQGRFHYYEGNSMELVTFPIRIMKALGCQGLIVTNAAG 149 (303)
T ss_dssp EEEEEEETTEEEEEEC-CCCGGGC-CHHHHHHHHHHHHHHTCCEEEEEEEEE
T ss_pred ceEEEEECCEEEEEEecCcccccCCCHHHHHHHHHHHHHcCCCEEEEeccee
Confidence 34678899999999851110 114555568999999999877655433
No 81
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=55.96 E-value=20 Score=23.89 Aligned_cols=74 Identities=8% Similarity=0.015 Sum_probs=38.0
Q ss_pred CCCCCCcccCCCCCCeeeeccCC-CCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccC-CCCHHHHhhcCCC
Q psy15570 3 MDVGVPQHPAKEKPPISVVGDVG-GRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLL-SSDAPLLIEESPI 79 (84)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~g~v~-gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~-s~~a~~~l~~~~i 79 (84)
.+.-+|+..+ ........++.. ..-+|-+||--. .....+.+.|+++|++-.+++..-.+- .++..+++.++|.
T Consensus 10 ~~~~~~~~~~-~~~~~i~~~~~~~k~VaLTFDDGp~--~~~~~il~iL~~~~v~ATfFv~g~~~~~~p~~~~~~~~~Gh 85 (230)
T 2y8u_A 10 RSTPLPLVRR-VPTGQVITQCTTPNTIALTFDDGPS--EYTPQLLDLLSRYSARATFFVLGDAAAQNPGLLQRMRDEGH 85 (230)
T ss_dssp -----------CCSSSEECSCCSTTEEEEEEESCCC--TTHHHHHHHHHHTTCCCEEEECHHHHHHCHHHHHHHHHTTC
T ss_pred cCCCCCcccC-CCCCceeecCCCCCEEEEEecCCch--hhHHHHHHHHHHcCCCEEEEEecHHHhHCHHHHHHHHHCCC
Confidence 3455666655 333333334433 346788999776 335678899999998876655532221 1345666666653
No 82
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=54.80 E-value=30 Score=23.14 Aligned_cols=51 Identities=12% Similarity=0.074 Sum_probs=27.6
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHc-CCCeEEEEEEeccCCC-CHHHHhhcC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDR-GAYKIYVLATHGLLSS-DAPLLIEES 77 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~-ga~~v~~~~~h~~~s~-~a~~~l~~~ 77 (84)
++.++|||.-.+ -....++++.+++. |....+++.||.-+.- .+...+.+.
T Consensus 83 ~~~~ilIDtg~~-~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~~ 135 (270)
T 4eyb_A 83 GGRVLVVDTAWT-DDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAA 135 (270)
T ss_dssp TTEEEEESCCSS-HHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHT
T ss_pred CCEEEEEeCCCC-HHHHHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHHC
Confidence 455666665432 23344566667665 5444568889985432 233444433
No 83
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=54.34 E-value=8.2 Score=24.88 Aligned_cols=52 Identities=12% Similarity=0.050 Sum_probs=35.2
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEecc-CCCCHHHHhhcCCC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGL-LSSDAPLLIEESPI 79 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~-~s~~a~~~l~~~~i 79 (84)
+.-+|-+||-...+ ...+.+.|+++|++-.+++....+ ..++..+++.++|.
T Consensus 5 ~~V~LTFDDG~~~~--~~~il~iL~~~~v~aTfFv~g~~~~~~~~~~~~~~~~Gh 57 (195)
T 2cc0_A 5 GYVGLTFDDGPSGS--TQSLLNALRQNGLRATMFNQGQYAAQNPSLVRAQVDAGM 57 (195)
T ss_dssp EEEEEEEESCCSTT--HHHHHHHHHHTTCCCEEEECHHHHHHCHHHHHHHHHTTC
T ss_pred CEEEEEEcCCCchh--HHHHHHHHHHcCCCEEEEecChhhhhCHHHHHHHHHCCC
Confidence 34578899998877 577889999999887665553221 12345666666653
No 84
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A*
Probab=53.74 E-value=47 Score=22.95 Aligned_cols=61 Identities=16% Similarity=0.214 Sum_probs=38.1
Q ss_pred CCCcc-cCCCCC-------CeeeeccCCCCEEEEEecccc--chHHH---HHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 6 GVPQH-PAKEKP-------PISVVGDVGGRVAIMVDDMVD--DVHSF---VAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 6 ~~~~~-~~~~~~-------~~~i~g~v~gk~vlivDDii~--TG~Tl---~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
.+||. .++... .-.+.|.++|+.|+++--+-- .|.++ ...++.+++.|++.+....+-+-+
T Consensus 51 ~~py~~~p~fp~~tv~gh~~~~~~G~l~G~~V~~~~G~gh~~~~~~v~~~~a~i~~l~~lGv~~iI~tgaaG~l 124 (268)
T 1g2o_A 51 VLPQAELPGFVPPTAAGHAGELLSVPIGAHRVLVLAGRIHAYEGHDLRYVVHPVRAARAAGAQIMVLTNAAGGL 124 (268)
T ss_dssp EEEGGGSTTCCCCCSTTCCCEEEEEEETTEEEEEEECCCCGGGTCCHHHHSHHHHHHHHTTCCEEEEEEEEEEC
T ss_pred EeecccCCCCCCCcccCCCCeEEEEEECCEEEEEEECCCcCCCCCCHHHHHHHHHHHHHcCCCEEEEecceecC
Confidence 56776 444332 234678899999999842211 11133 445789999999988776655533
No 85
>1qe5_A Pentosyltransferase; enzyme, purine nucleoside phosphorylase; 2.20A {Cellulomonas SP} SCOP: c.56.2.1 PDB: 1c3x_A
Probab=53.30 E-value=26 Score=24.29 Aligned_cols=60 Identities=20% Similarity=0.211 Sum_probs=37.7
Q ss_pred CCCcc-cCCCCCCeeeeccCCC-----CEEEEEecccc-----chHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 6 GVPQH-PAKEKPPISVVGDVGG-----RVAIMVDDMVD-----DVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 6 ~~~~~-~~~~~~~~~i~g~v~g-----k~vlivDDii~-----TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
.+||. +.+... -.+.|.++| ++|+++--.-- +-+.+...++.+++.|++.+....+-+-+
T Consensus 53 ~~~y~~ipg~p~-~l~~G~l~G~~~~~~~Vv~~~Gr~h~yeg~~p~~V~a~i~~l~~lGv~~iI~tgaaG~l 123 (266)
T 1qe5_A 53 EVPTHEIPGFSS-VTRSIRVERADGSVRHALVLGSRTHLYEGKGVRAVVHGVRTAAATGAETLILTNGCGGL 123 (266)
T ss_dssp EEEGGGSTTCCC-EEEEEEEECTTSCEEEEEECCSCCCGGGSSCHHHHSHHHHHHHHTTCCEEEEEEEEEEC
T ss_pred EEecCCCCCCCe-EEEEEEECCcCCCceEEEEEECCccccCCCCHHHHHHHHHHHHHcCCCEEEEecceecC
Confidence 45665 444443 345678888 99998721000 01346678899999999988776655533
No 86
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=53.17 E-value=27 Score=23.58 Aligned_cols=39 Identities=26% Similarity=0.267 Sum_probs=30.3
Q ss_pred eeeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEE
Q psy15570 18 ISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 61 (84)
Q Consensus 18 ~~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~ 61 (84)
|.+.-+++||+|+|| -.|..-...++.|.+.|+. |.+++
T Consensus 23 ~Pifl~L~gk~VLVV----GgG~va~~ka~~Ll~~GA~-VtVva 61 (223)
T 3dfz_A 23 YTVMLDLKGRSVLVV----GGGTIATRRIKGFLQEGAA-ITVVA 61 (223)
T ss_dssp CEEEECCTTCCEEEE----CCSHHHHHHHHHHGGGCCC-EEEEC
T ss_pred cccEEEcCCCEEEEE----CCCHHHHHHHHHHHHCCCE-EEEEC
Confidence 344558999999985 5788888899999999986 44444
No 87
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=52.99 E-value=15 Score=23.87 Aligned_cols=39 Identities=13% Similarity=0.057 Sum_probs=24.5
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHc-CCCeEEEEEEeccC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDR-GAYKIYVLATHGLL 66 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~-ga~~v~~~~~h~~~ 66 (84)
+..+|||--.. ........+.+++. |.+.-.++.||.-+
T Consensus 57 ~~~iLID~G~~-~~~~~~l~~~l~~~~~~~i~~vi~TH~H~ 96 (243)
T 4hl2_A 57 GRVLVVDTAWT-DDQTAQILNWIKQEINLPVALAVVTHAHQ 96 (243)
T ss_dssp TEEEEESCCSS-HHHHHHHHHHHHHHTCCCEEEEEECSSSH
T ss_pred CcEEEEECCCC-CccHHHHHHHHHHhhCCCeeEEEECCCCc
Confidence 34555543321 14556677888887 77666788899854
No 88
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=52.73 E-value=23 Score=23.68 Aligned_cols=41 Identities=15% Similarity=0.054 Sum_probs=27.5
Q ss_pred CCEEEEEecccc-chHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 26 GRVAIMVDDMVD-DVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 26 gk~vlivDDii~-TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
++..+|||--.. +........+.+++.|...-.++.||.-.
T Consensus 40 ~~~~ilID~G~~~~~~~~~~l~~~l~~~~~~i~~Ii~TH~H~ 81 (289)
T 4ad9_A 40 GPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHR 81 (289)
T ss_dssp SSSEEEECCCSTTCHHHHHHHHHHHHHTTCCEEEEECSCSSH
T ss_pred CCceEEEeCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCCC
Confidence 345666666643 34445667778888888777888899854
No 89
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=52.53 E-value=33 Score=23.65 Aligned_cols=34 Identities=21% Similarity=0.137 Sum_probs=29.0
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEE
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 61 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~ 61 (84)
.++++++| +-+|++-..++-.|.+.|+.++.++.
T Consensus 123 ~~~~~~li----lGaGGaarai~~aL~~~g~~~i~i~n 156 (269)
T 3tum_A 123 PAGKRALV----IGCGGVGSAIAYALAEAGIASITLCD 156 (269)
T ss_dssp CTTCEEEE----ECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cccCeEEE----EecHHHHHHHHHHHHHhCCCeEEEeC
Confidence 56888886 57999999999999999999887654
No 90
>3phb_E Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.30A {Homo sapiens}
Probab=52.02 E-value=53 Score=23.60 Aligned_cols=50 Identities=20% Similarity=0.233 Sum_probs=33.3
Q ss_pred CeeeeccCCCCEEEEEecccc-----chHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 17 PISVVGDVGGRVAIMVDDMVD-----DVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 17 ~~~i~g~v~gk~vlivDDii~-----TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
.-.+.|.++|+.|+++--..- +=+.+...++.+++.|++.+....+-+-+
T Consensus 101 g~l~~G~l~G~~Vv~m~Gr~H~yeG~~~~~V~~~~~ll~~lGv~~II~tgaaGgL 155 (324)
T 3phb_E 101 GRLVFGFLNGRACVMMQGRFHMYEGYPLWKVTFPVRVFHLLGVDTLVVTNAAGGL 155 (324)
T ss_dssp CEEEEEEETTEEEEEEESCCCGGGTCCHHHHTHHHHHHHHHTCCEEEEEEEEEEC
T ss_pred CceEEEEECCEEEEEEeCCccccCCCChHHHHHHHHHHHHcCCCEEEEecceeec
Confidence 345678899999999831110 01344556789999999998776655533
No 91
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=51.87 E-value=18 Score=24.33 Aligned_cols=36 Identities=11% Similarity=0.102 Sum_probs=24.3
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
++.++|||.- .. ....+.|++.|.....++.||.-+
T Consensus 28 ~~~~vlID~G----~~-~~i~~~l~~~g~~i~~Il~TH~H~ 63 (258)
T 2qed_A 28 EGRCVIVDPG----EA-APVLKAIAEHKWMPEAIFLTHHHH 63 (258)
T ss_dssp TSEEEEECCS----CH-HHHHHHHHHHTCEEEEEECCSCCH
T ss_pred CCcEEEEeCC----Cc-HHHHHHHHHcCCCCCEEEeCCCCc
Confidence 4567777754 22 345677888888656778899854
No 92
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=51.39 E-value=36 Score=24.80 Aligned_cols=46 Identities=13% Similarity=0.170 Sum_probs=33.1
Q ss_pred eeeeccCCCCEEEEEeccccc-hHHHH---HHHHHHHHcCCCeEEEEEEe
Q psy15570 18 ISVVGDVGGRVAIMVDDMVDD-VHSFV---AAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 18 ~~i~g~v~gk~vlivDDii~T-G~Tl~---~~~~~L~~~ga~~v~~~~~h 63 (84)
.++...+.|++|+|+-..... -..+. -.+.++++++|+++.++..+
T Consensus 71 v~i~esvrg~dV~iiqs~~~~~nd~lmeLl~~idA~k~asA~rit~ViPY 120 (379)
T 2ji4_A 71 VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPY 120 (379)
T ss_dssp EEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred EEeCCCcCCCEEEEEeCCCCCccHHHHHHHHHHHHHHhcCCceEEEEEec
Confidence 345567899999999887642 23333 35579999999998877743
No 93
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=51.38 E-value=12 Score=22.38 Aligned_cols=33 Identities=12% Similarity=-0.043 Sum_probs=26.1
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 60 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~ 60 (84)
+++.++++.. +|..-..++..|++.|.+.++.+
T Consensus 81 ~~~~ivvyC~---~G~rs~~aa~~L~~~G~~~v~~l 113 (129)
T 1tq1_A 81 QSDNIIVGCQ---SGGRSIKATTDLLHAGFTGVKDI 113 (129)
T ss_dssp TTSSEEEEES---SCSHHHHHHHHHHHHHCCSEEEE
T ss_pred CCCeEEEECC---CCcHHHHHHHHHHHcCCCCeEEe
Confidence 4678888765 67788888999999999877654
No 94
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=51.31 E-value=13 Score=22.72 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=24.3
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 60 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~ 60 (84)
+++.++++.. +|..-..++..|++.|.+.++.+
T Consensus 79 ~~~~ivvyC~---~G~rS~~aa~~L~~~G~~~v~~l 111 (148)
T 2fsx_A 79 HERPVIFLCR---SGNRSIGAAEVATEAGITPAYNV 111 (148)
T ss_dssp --CCEEEECS---SSSTHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEEcC---CChhHHHHHHHHHHcCCcceEEE
Confidence 4678888864 67666788899999999877644
No 95
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=50.52 E-value=28 Score=20.04 Aligned_cols=29 Identities=10% Similarity=0.083 Sum_probs=24.3
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCe
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYK 56 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~ 56 (84)
+++.++++. .+|..-..++..|++.|.+.
T Consensus 55 ~~~~ivvyC---~~G~rs~~aa~~L~~~G~~~ 83 (110)
T 2k0z_A 55 KDKKVLLHC---RAGRRALDAAKSMHELGYTP 83 (110)
T ss_dssp SSSCEEEEC---SSSHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEEe---CCCchHHHHHHHHHHCCCCE
Confidence 577888887 57888888999999999876
No 96
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=49.25 E-value=34 Score=21.98 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=23.5
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHc-CCCeEEEEEEeccC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDR-GAYKIYVLATHGLL 66 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~-ga~~v~~~~~h~~~ 66 (84)
+.++|||--.. ........+.|++. +.+.+.++.||.-+
T Consensus 40 ~~~iLiD~G~~-~~~~~~l~~~l~~~~~~~~~~vi~TH~H~ 79 (246)
T 2fhx_A 40 GTVVIVSSPFE-NLGTQTLMDWVAKTMKPKKVVAINTHFHL 79 (246)
T ss_dssp SEEEEESCCSS-HHHHHHHHHHHHHHHCCSEEEEECCSSSH
T ss_pred CeEEEEeCCCC-HHHHHHHHHHHHHhcCCCcEEEEeCCCCc
Confidence 34566664432 12334455667665 77778888899854
No 97
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=48.39 E-value=22 Score=21.76 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=20.4
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCCeEE
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIY 58 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~ 58 (84)
+-+|+||||--+.-..+ .+.|++.|...+.
T Consensus 12 ~~rILiVDD~~~~r~~l---~~~L~~~G~~~v~ 41 (134)
T 3to5_A 12 NMKILIVDDFSTMRRIV---KNLLRDLGFNNTQ 41 (134)
T ss_dssp TCCEEEECSCHHHHHHH---HHHHHHTTCCCEE
T ss_pred CCEEEEEeCCHHHHHHH---HHHHHHcCCcEEE
Confidence 44799999966554444 4577888876544
No 98
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=48.31 E-value=22 Score=20.84 Aligned_cols=28 Identities=18% Similarity=0.035 Sum_probs=18.0
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCC
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAY 55 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~ 55 (84)
++.+++|+||=-.....+. +.|.+.|..
T Consensus 14 ~~~~iLivdd~~~~~~~l~---~~L~~~~~~ 41 (152)
T 3eul_A 14 EKVRVVVGDDHPLFREGVV---RALSLSGSV 41 (152)
T ss_dssp CCEEEEEECSSHHHHHHHH---HHHHHHSSE
T ss_pred ceEEEEEEcCCHHHHHHHH---HHHhhCCCe
Confidence 4678999998654444443 556666643
No 99
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=48.30 E-value=15 Score=22.34 Aligned_cols=44 Identities=14% Similarity=0.060 Sum_probs=30.8
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
+++.++++. .+|..-..++..|++.|.+.++.+. .+...+.+.+
T Consensus 81 ~~~~ivvyC---~~G~rS~~aa~~L~~~G~~~v~~l~-------GG~~~W~~~g 124 (137)
T 1qxn_A 81 PEKPVVVFC---KTAARAALAGKTLREYGFKTIYNSE-------GGMDKWLEEG 124 (137)
T ss_dssp TTSCEEEEC---CSSSCHHHHHHHHHHHTCSCEEEES-------SCHHHHHHTT
T ss_pred CCCeEEEEc---CCCcHHHHHHHHHHHcCCcceEEEc-------CcHHHHHHCC
Confidence 578888876 4677777788999999998776432 3455555544
No 100
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=48.26 E-value=14 Score=25.68 Aligned_cols=32 Identities=19% Similarity=0.193 Sum_probs=18.4
Q ss_pred cccchHHHHHHHHHHHHc----C-----CCeEEEEEEeccC
Q psy15570 35 MVDDVHSFVAAAEVLKDR----G-----AYKIYVLATHGLL 66 (84)
Q Consensus 35 ii~TG~Tl~~~~~~L~~~----g-----a~~v~~~~~h~~~ 66 (84)
+||+|+......+.|++. | .....++.||.-+
T Consensus 55 lID~G~~~~~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~ 95 (311)
T 2p18_A 55 AVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHW 95 (311)
T ss_dssp EESCCSCCHHHHHHHHHTC--------CCEEEEEEESSSSH
T ss_pred EEeCCCChHHHHHHHHHHHhhcCCCCCCCCccEEEeCCCCc
Confidence 345544334556677776 7 4445677899754
No 101
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=46.93 E-value=47 Score=22.80 Aligned_cols=35 Identities=9% Similarity=0.115 Sum_probs=28.4
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEE
Q psy15570 23 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 61 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~ 61 (84)
+++||+++|+ -+|+.-..++..|.+.|+..+.++.
T Consensus 117 ~l~~k~~lvl----GaGg~~~aia~~L~~~G~~~v~i~~ 151 (272)
T 3pwz_A 117 PLRNRRVLLL----GAGGAVRGALLPFLQAGPSELVIAN 151 (272)
T ss_dssp CCTTSEEEEE----CCSHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CccCCEEEEE----CccHHHHHHHHHHHHcCCCEEEEEe
Confidence 4678999875 5688888899999999998776654
No 102
>2ekd_A Hypothetical protein PH0250; NPPSFA, national project on protein structural and functiona analyses; 2.30A {Pyrococcus horikoshii}
Probab=46.59 E-value=11 Score=25.52 Aligned_cols=24 Identities=38% Similarity=0.477 Sum_probs=17.9
Q ss_pred EEEEeccccchHHHHHHHHHHHHcCCC
Q psy15570 29 AIMVDDMVDDVHSFVAAAEVLKDRGAY 55 (84)
Q Consensus 29 vlivDDii~TG~Tl~~~~~~L~~~ga~ 55 (84)
-++|||+.||+..... .|+-.|..
T Consensus 42 pilI~DilDtl~i~~~---~Lkl~G~d 65 (207)
T 2ekd_A 42 PIVVDDILDTYYEFYT---RLKVAGFD 65 (207)
T ss_dssp CBEEEEETTHHHHHHH---HHHHTTCC
T ss_pred cEEEEeccccHHHHHH---HHHhcCCC
Confidence 5688999999977764 56656654
No 103
>1vq2_A DCMP deaminase, deoxycytidylate deaminase; hydrolase; HET: DDN; 2.20A {Enterobacteria phage T4} SCOP: c.97.1.2
Probab=45.96 E-value=25 Score=22.93 Aligned_cols=38 Identities=13% Similarity=0.107 Sum_probs=24.3
Q ss_pred HHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 43 VAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 43 ~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
..+++++.+.|.++|......+-..+...+.|.++||+
T Consensus 133 ~~Ca~aIi~aGI~rVvy~~~~~~~~~~~~~~l~~aGI~ 170 (193)
T 1vq2_A 133 PDCAKAIAQSGIKKLVYCETYDKNKPGWDDILRNAGIE 170 (193)
T ss_dssp HHHHHHHHHHTCCEEEEEECCTTCCTTTTHHHHHTTCE
T ss_pred HHHHHHHHHhCCCEEEEecCCCCcchHHHHHHHHCCCE
Confidence 56778888888888777654443222223777777764
No 104
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=45.70 E-value=41 Score=19.26 Aligned_cols=28 Identities=21% Similarity=0.328 Sum_probs=17.9
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCC
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAY 55 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~ 55 (84)
...+++|+||=-..... ..+.|++.|..
T Consensus 4 ~~~~ILivdd~~~~~~~---l~~~L~~~~~~ 31 (144)
T 3kht_A 4 RSKRVLVVEDNPDDIAL---IRRVLDRKDIH 31 (144)
T ss_dssp -CEEEEEECCCHHHHHH---HHHHHHHTTCC
T ss_pred CCCEEEEEeCCHHHHHH---HHHHHHhcCCC
Confidence 35689999985544433 44567777765
No 105
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=45.66 E-value=49 Score=20.12 Aligned_cols=53 Identities=15% Similarity=0.142 Sum_probs=35.6
Q ss_pred CEEEEEec--cccch----------HHHHHHHHHHHHcCCCeEEEEEEeccCCCC--------HHHHhhcCCCCcCC
Q psy15570 27 RVAIMVDD--MVDDV----------HSFVAAAEVLKDRGAYKIYVLATHGLLSSD--------APLLIEESPIDEVP 83 (84)
Q Consensus 27 k~vlivDD--ii~TG----------~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~--------a~~~l~~~~i~~i~ 83 (84)
+++-|+|. ..+|| -.+...++.|++.|+..-+.- +.+.+ ..+.|++.|++.+|
T Consensus 5 ~~i~ifepamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyN----L~~~P~~F~~N~~V~~~L~~~G~~~LP 77 (106)
T 3ktb_A 5 KKIEIFDPAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHN----LRDEPQVYVSNKTVNDFLQKHGADALP 77 (106)
T ss_dssp CCEEEEECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEE----TTTCTTHHHHSHHHHHHHHTTCGGGCS
T ss_pred ceEEEechhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEc----cccChHHHhcCHHHHHHHHHcCcccCC
Confidence 34556666 23555 677888899999998754432 33333 35777889999888
No 106
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=45.30 E-value=28 Score=22.43 Aligned_cols=39 Identities=13% Similarity=0.028 Sum_probs=23.9
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
+.++|||--... .......+.|++.|...-.++.||.-+
T Consensus 42 ~~~iliD~g~~~-~~~~~~~~~l~~~g~~i~~ii~TH~H~ 80 (228)
T 1jjt_A 42 AEAYLIDTPFTA-KDTEKLVTWFVERGYKIKGSISSHFHS 80 (228)
T ss_dssp TEEEEESCCSSH-HHHHHHHHHHHTTTCEEEEEECSSSSH
T ss_pred CcEEEEeCCCCh-hhHHHHHHHHHHcCCCeeEEEeCCCCh
Confidence 455666654432 233556778888876545677888754
No 107
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=45.19 E-value=32 Score=20.48 Aligned_cols=45 Identities=9% Similarity=-0.127 Sum_probs=32.0
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
+++.++++.. +|..-..++..|++.|...++. + ..+.....+.+.
T Consensus 90 ~~~~ivvyC~---~G~rs~~aa~~L~~~G~~~v~~------l-~GG~~~W~~~g~ 134 (139)
T 3d1p_A 90 SAKELIFYCA---SGKRGGEAQKVASSHGYSNTSL------Y-PGSMNDWVSHGG 134 (139)
T ss_dssp TTSEEEEECS---SSHHHHHHHHHHHTTTCCSEEE------C-TTHHHHHHHTTG
T ss_pred CCCeEEEECC---CCchHHHHHHHHHHcCCCCeEE------e-CCcHHHHHHcCC
Confidence 5788888764 5888888999999999876552 2 355666655553
No 108
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=44.37 E-value=40 Score=18.69 Aligned_cols=29 Identities=21% Similarity=0.061 Sum_probs=23.1
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHcCCCeEEE
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYV 59 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~ 59 (84)
+.++++. .+|..-..++..|++.|.+ ++.
T Consensus 54 ~~ivvyC---~~g~rs~~a~~~L~~~G~~-v~~ 82 (94)
T 1wv9_A 54 RPLLLVC---EKGLLSQVAALYLEAEGYE-AMS 82 (94)
T ss_dssp SCEEEEC---SSSHHHHHHHHHHHHHTCC-EEE
T ss_pred CCEEEEc---CCCChHHHHHHHHHHcCCc-EEE
Confidence 7788876 4687778889999999987 553
No 109
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=44.14 E-value=55 Score=22.55 Aligned_cols=35 Identities=20% Similarity=0.042 Sum_probs=28.4
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEE
Q psy15570 23 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 61 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~ 61 (84)
+++||+++|+ -+|+.-..++..|.+.|++.+.++.
T Consensus 124 ~l~~k~vlVl----GaGG~g~aia~~L~~~G~~~v~i~~ 158 (283)
T 3jyo_A 124 NAKLDSVVQV----GAGGVGNAVAYALVTHGVQKLQVAD 158 (283)
T ss_dssp TCCCSEEEEE----CCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CcCCCEEEEE----CCcHHHHHHHHHHHHCCCCEEEEEE
Confidence 4678999886 4688888899999999998777654
No 110
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=43.68 E-value=57 Score=23.01 Aligned_cols=35 Identities=14% Similarity=0.104 Sum_probs=28.9
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEE
Q psy15570 23 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 61 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~ 61 (84)
+++||+++|+ -+|+.-..++..|.+.|++.|.++.
T Consensus 151 ~l~gk~~lVl----GaGG~g~aia~~L~~~Ga~~V~i~n 185 (315)
T 3tnl_A 151 DIIGKKMTIC----GAGGAATAICIQAALDGVKEISIFN 185 (315)
T ss_dssp CCTTSEEEEE----CCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CccCCEEEEE----CCChHHHHHHHHHHHCCCCEEEEEE
Confidence 3678999886 4688888999999999998887665
No 111
>1vk9_A Conserved hypothetical protein TM1506; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: UNL; 2.70A {Thermotoga maritima} SCOP: c.97.1.3
Probab=43.11 E-value=21 Score=23.29 Aligned_cols=43 Identities=28% Similarity=0.278 Sum_probs=32.5
Q ss_pred EEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 29 AIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 29 vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
..+.|-++-- .|+..+-..|++.|++-+ .|.+|++.|++.||+
T Consensus 64 a~vADKVVGK-----AAA~Lmv~ggV~~VyA~V----ISe~Al~lL~~~GI~ 106 (151)
T 1vk9_A 64 SLVIDKMVGK-----AAASFLLKMKPDHIHAKV----ISKPALKLMNEYGQS 106 (151)
T ss_dssp CEEEEEEECH-----HHHHHHHHHCCSEEEEEE----EEHHHHHHHHHTTCC
T ss_pred CEehHHHHhH-----HHHHHHHhcChheehhHH----hhHHHHHHHHHcCCc
Confidence 4677777753 345566777999888776 478999999999874
No 112
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=43.03 E-value=45 Score=19.61 Aligned_cols=34 Identities=9% Similarity=0.073 Sum_probs=18.8
Q ss_pred CCCCEEEEEeccccc-hHHHHHHHHHHHHcCCCeE
Q psy15570 24 VGGRVAIMVDDMVDD-VHSFVAAAEVLKDRGAYKI 57 (84)
Q Consensus 24 v~gk~vlivDDii~T-G~Tl~~~~~~L~~~ga~~v 57 (84)
++||++.++----.+ |.++....+.|++.|+..+
T Consensus 77 l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~v 111 (138)
T 5nul_A 77 ISGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVV 111 (138)
T ss_dssp CTTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEEC
T ss_pred cCCCEEEEEEecCCCCChHHHHHHHHHHHCCCEEE
Confidence 456666655422222 4556666666666666654
No 113
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=43.01 E-value=37 Score=23.62 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=28.3
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEE
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 61 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~ 61 (84)
++|++++|+ -+|++-..++..|.+.|++.+.++.
T Consensus 120 ~~~k~vlvl----GaGGaaraia~~L~~~G~~~v~v~n 153 (282)
T 3fbt_A 120 IKNNICVVL----GSGGAARAVLQYLKDNFAKDIYVVT 153 (282)
T ss_dssp CTTSEEEEE----CSSTTHHHHHHHHHHTTCSEEEEEE
T ss_pred ccCCEEEEE----CCcHHHHHHHHHHHHcCCCEEEEEe
Confidence 578899875 5788888899999999998887665
No 114
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=42.99 E-value=26 Score=23.92 Aligned_cols=42 Identities=19% Similarity=0.075 Sum_probs=28.2
Q ss_pred ccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCCc
Q psy15570 36 VDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPIDE 81 (84)
Q Consensus 36 i~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~~ 81 (84)
++||+|....++.|.+.. +.+.++++ -|-...+.+.+.++.-
T Consensus 32 lgsGST~~~~i~~L~~~~-~~itv~Vt---nS~~~a~~l~~~gi~l 73 (224)
T 3kwm_A 32 VGTGSTVGFLIEELVNYR-DKIKTVVS---SSEDSTRKLKALGFDV 73 (224)
T ss_dssp ECCSHHHHHHHHHGGGCT-TTEEEEEE---SCHHHHHHHHHTTCCB
T ss_pred ECCcHHHHHHHHHHHhhc-CceEEEEC---CcHHHHHHHHHcCCeE
Confidence 469999999999998764 34555333 2335566777777643
No 115
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=42.18 E-value=36 Score=19.72 Aligned_cols=44 Identities=9% Similarity=0.037 Sum_probs=31.7
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
+++.++++- .+|..-..+++.|++.|.+.+. + .++.....++|.
T Consensus 55 ~~~~ivv~C---~~G~rS~~aa~~L~~~G~~~~~------l--~GG~~~W~~~g~ 98 (103)
T 3iwh_A 55 KNEIYYIVC---AGGVRSAKVVEYLEANGIDAVN------V--EGGMHAWGDEGL 98 (103)
T ss_dssp TTSEEEEEC---SSSSHHHHHHHHHHTTTCEEEE------E--TTHHHHHCSSSC
T ss_pred CCCeEEEEC---CCCHHHHHHHHHHHHcCCCEEE------e--cChHHHHHHCCC
Confidence 477888864 5788888899999999985432 2 456777776653
No 116
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=41.88 E-value=56 Score=22.52 Aligned_cols=35 Identities=14% Similarity=0.102 Sum_probs=28.3
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEE
Q psy15570 23 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 61 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~ 61 (84)
+++||+++|+ -+|+.-..++..|.+.|+.++.++.
T Consensus 123 ~l~~k~vlvl----GaGg~g~aia~~L~~~G~~~v~v~~ 157 (281)
T 3o8q_A 123 LLKGATILLI----GAGGAARGVLKPLLDQQPASITVTN 157 (281)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CccCCEEEEE----CchHHHHHHHHHHHhcCCCeEEEEE
Confidence 3578999876 4688888889999999998887665
No 117
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, STRU genomics, seattle structural genomics center for infectious; HET: 5RP; 2.30A {Bartonella henselae}
Probab=41.34 E-value=17 Score=25.48 Aligned_cols=49 Identities=16% Similarity=0.149 Sum_probs=30.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCC--CeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGA--YKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga--~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
++...++- +.||+|....++.|.+... ..+.++++ |-...+++.+.++.
T Consensus 39 V~dg~vIg----LGsGST~~~~i~~L~~~~~~gl~ItvVtt----S~~ta~~l~~~GI~ 89 (255)
T 3hhe_A 39 VEDDMRLG----IGSGSTVNEFIPLLGERVANGLRVTCVAT----SQYSEQLCHKFGVP 89 (255)
T ss_dssp CCTTEEEE----ECCSHHHHHHHHHHHHHHHTTCCEEEEES----SHHHHHHHHHTTCC
T ss_pred CCCCCEEE----ECCcHHHHHHHHHHHHhhccCCcEEEEcC----CHHHHHHHHHcCCc
Confidence 44444554 4699999999999976421 24554442 34566677776664
No 118
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=41.27 E-value=20 Score=21.56 Aligned_cols=32 Identities=13% Similarity=0.009 Sum_probs=24.6
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYV 59 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~ 59 (84)
+++.++++ ..+|..-..+++.|++.|.+.++.
T Consensus 73 ~~~~ivv~---C~sG~RS~~aa~~L~~~G~~~v~~ 104 (134)
T 1vee_A 73 ENTTLYIL---DKFDGNSELVAELVALNGFKSAYA 104 (134)
T ss_dssp GGCEEEEE---CSSSTTHHHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEE---eCCCCcHHHHHHHHHHcCCcceEE
Confidence 46777775 468877778889999999987654
No 119
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=40.40 E-value=32 Score=19.46 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=18.1
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeE
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKI 57 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v 57 (84)
....+++|+||=-.....+. +.|++.|...+
T Consensus 3 ~~~~~iLivdd~~~~~~~l~---~~L~~~g~~~v 33 (129)
T 3h1g_A 3 LGSMKLLVVDDSSTMRRIIK---NTLSRLGYEDV 33 (129)
T ss_dssp ---CCEEEECSCHHHHHHHH---HHHHHTTCCCE
T ss_pred CCCcEEEEEeCCHHHHHHHH---HHHHHcCCcEE
Confidence 34567999998655544444 55667776533
No 120
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=40.37 E-value=37 Score=22.23 Aligned_cols=38 Identities=16% Similarity=0.244 Sum_probs=24.4
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHcCCC---eEEEEEEeccC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDRGAY---KIYVLATHGLL 66 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~ga~---~v~~~~~h~~~ 66 (84)
...+|||--.. .+.....+.|++.|.. .-.++.||.-+
T Consensus 34 ~~~iLID~G~~--~~~~~l~~~l~~~g~~~~~i~~IilTH~H~ 74 (263)
T 1k07_A 34 RGNILINSDLE--ANVPMIKASIKKLGFKFSDTKILLISHAHF 74 (263)
T ss_dssp TEEEEECCCCG--GGHHHHHHHHHHTTCCGGGEEEEECSSSSH
T ss_pred CceEEEECCCc--ccHHHHHHHHHHcCCCHHHCcEEEeCCCCc
Confidence 45666665432 3455667888988865 44677899743
No 121
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=39.39 E-value=48 Score=22.13 Aligned_cols=32 Identities=13% Similarity=0.082 Sum_probs=24.8
Q ss_pred CCCEEEEEeccccchH-HHHHHHHHHHHcCCCeEEE
Q psy15570 25 GGRVAIMVDDMVDDVH-SFVAAAEVLKDRGAYKIYV 59 (84)
Q Consensus 25 ~gk~vlivDDii~TG~-Tl~~~~~~L~~~ga~~v~~ 59 (84)
+++.++++++ +|. ....++..|++.|...|+.
T Consensus 78 ~~~~ivvyc~---~g~~~s~~a~~~L~~~G~~~v~~ 110 (285)
T 1uar_A 78 NDTTVVLYGD---KNNWWAAYAFWFFKYNGHKDVRL 110 (285)
T ss_dssp TTCEEEEECH---HHHHHHHHHHHHHHHTTCSCEEE
T ss_pred CCCeEEEECC---CCCccHHHHHHHHHHcCCCCeEE
Confidence 5788999874 465 5677889999999987763
No 122
>2w3z_A Putative deacetylase; PGDA, glcnac DE-N-acetylase, hydrolase, divale metal cation dependent, carbohydrate esterase family 4; 1.45A {Streptococcus mutans UA159}
Probab=39.30 E-value=36 Score=23.82 Aligned_cols=51 Identities=16% Similarity=0.078 Sum_probs=34.9
Q ss_pred EEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCC--CCHHHHhhcCCC
Q psy15570 28 VAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLS--SDAPLLIEESPI 79 (84)
Q Consensus 28 ~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s--~~a~~~l~~~~i 79 (84)
-+|-+||--.+..| ..+++.|+++|++-.+.+....+-. ++..+++.+.|.
T Consensus 109 VaLTFDDGp~~~~t-~~iLdiL~~~~vkATFFv~G~~i~~~~p~~vr~i~~~Gh 161 (311)
T 2w3z_A 109 VFLTFDDGVDPNMT-PKILDVLAQQHVHATFFLVGCNITDKVKPILQRQITEGH 161 (311)
T ss_dssp EEEEEEEECCTTHH-HHHHHHHHHTTCCCEEEECGGGCCGGGHHHHHHHHHTTC
T ss_pred EEEEEcCCCCcccH-HHHHHHHHHcCCcEEEEEeChhhcccCHHHHHHHHHCCC
Confidence 57889998877644 5678999999998766665433321 345666666663
No 123
>1tcv_A Purine-nucleoside phosphorylase; transferase; HET: NDS; 1.75A {Schistosoma mansoni} PDB: 1tcu_A* 1td1_A 3djf_A* 3e0q_A* 3e9r_A* 3e9z_A* 3f8w_A* 3faz_A* 3fb1_A* 3fnq_A* 3iex_A*
Probab=38.99 E-value=96 Score=21.57 Aligned_cols=49 Identities=18% Similarity=0.255 Sum_probs=33.4
Q ss_pred eeeeccCCCCEEEEEecccc-----chHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 18 ISVVGDVGGRVAIMVDDMVD-----DVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 18 ~~i~g~v~gk~vlivDDii~-----TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
-.+.|.++|+.|+++--+.- +-+.+...++.|+..|++.+....+-+-+
T Consensus 69 ~l~~G~l~G~~V~~~~G~gH~yeG~~p~~V~~~i~~l~~lGv~~iI~tgaaG~l 122 (287)
T 1tcv_A 69 NLIFGTLSGRKVVVMQGRFHMYEGYSNDTVALPIRVMKLLGVKILMVSNAAGGL 122 (287)
T ss_dssp EEEEEEETTEEEEEEESCCCGGGTCCHHHHHHHHHHHHHHTCCEEEEEEEEEEC
T ss_pred eEEEEEECCEEEEEEecCCcccCCCCHHHHHHHHHHHHHcCCCEEEEecceeec
Confidence 34578889999998872211 12244446899999999998777655543
No 124
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=38.69 E-value=31 Score=22.66 Aligned_cols=37 Identities=19% Similarity=0.291 Sum_probs=22.9
Q ss_pred EEEEEeccccchHHHHHHHHHHHHcCCC--eE-EEEEEeccC
Q psy15570 28 VAIMVDDMVDDVHSFVAAAEVLKDRGAY--KI-YVLATHGLL 66 (84)
Q Consensus 28 ~vlivDDii~TG~Tl~~~~~~L~~~ga~--~v-~~~~~h~~~ 66 (84)
..+|||--.. .......+.|++.|.. .+ .++.||.-+
T Consensus 48 ~~iLID~G~~--~~~~~l~~~l~~~g~~~~~i~~IilTH~H~ 87 (269)
T 1sml_A 48 GAVLLDGGMP--QMASHLLDNMKARGVTPRDLRLILLSHAHA 87 (269)
T ss_dssp EEEEECCBSG--GGHHHHHHHHHHTTCCGGGEEEEECSCCSH
T ss_pred ceEEEECCCC--ccHHHHHHHHHHcCCChHHCcEEEeCCCCc
Confidence 4555553321 1355667889998875 44 677899754
No 125
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=38.61 E-value=46 Score=20.95 Aligned_cols=40 Identities=10% Similarity=0.023 Sum_probs=24.3
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCCeE-EEEEEeccC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKI-YVLATHGLL 66 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v-~~~~~h~~~ 66 (84)
++.++|||--.+. .......+.+++.+.+.+ .++.||.-+
T Consensus 31 ~~~~iLiD~G~~~-~~~~~~~~~l~~~~~~~i~~ii~TH~H~ 71 (227)
T 3iog_A 31 AKGVTVVGATWTP-DTARELHKLIKRVSRKPVLEVINTNYHT 71 (227)
T ss_dssp SSCEEEESCCSSH-HHHHHHHHHHHTTCCSCEEEEECSSSSH
T ss_pred CCeEEEEECCCCh-HHHHHHHHHHHHhcCCCeEEEEeCCCch
Confidence 3456666644321 234556677887776666 677899854
No 126
>3c19_A Uncharacterized protein MK0293; protein structure initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 2.50A {Methanopyrus kandleri AV19}
Probab=38.44 E-value=23 Score=23.75 Aligned_cols=28 Identities=18% Similarity=0.158 Sum_probs=23.9
Q ss_pred EeccccchHHHHHHHHHHHH-cCCCeEEEEE
Q psy15570 32 VDDMVDDVHSFVAAAEVLKD-RGAYKIYVLA 61 (84)
Q Consensus 32 vDDii~TG~Tl~~~~~~L~~-~ga~~v~~~~ 61 (84)
|||+ ||.-+-.+++.|.+ .||..|++.-
T Consensus 19 IDD~--tpE~lg~~~e~L~~~aGAlDV~~tP 47 (186)
T 3c19_A 19 LDDR--DGEVLGDAIQKLIEREEVLACHAVP 47 (186)
T ss_dssp EETT--STTHHHHHHHHHTTSTTEEEEEEEE
T ss_pred CCCC--CHHHHHHHHHHHHhhCCCeEEEeee
Confidence 7898 79999999999999 9999887543
No 127
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=38.22 E-value=52 Score=21.78 Aligned_cols=31 Identities=16% Similarity=-0.021 Sum_probs=24.2
Q ss_pred CCCEEEEEeccccchH-HHHHHHHHHHHcCCCeEE
Q psy15570 25 GGRVAIMVDDMVDDVH-SFVAAAEVLKDRGAYKIY 58 (84)
Q Consensus 25 ~gk~vlivDDii~TG~-Tl~~~~~~L~~~ga~~v~ 58 (84)
+++.++++++ +|. ....++..|++.|.+.++
T Consensus 80 ~~~~vvvyc~---~g~~~s~~a~~~L~~~G~~~v~ 111 (271)
T 1e0c_A 80 PEAVYVVYDD---EGGGWAGRFIWLLDVIGQQRYH 111 (271)
T ss_dssp TTCEEEEECS---SSSHHHHHHHHHHHHTTCCCEE
T ss_pred CCCeEEEEcC---CCCccHHHHHHHHHHcCCCCeE
Confidence 5788999885 454 556788899999998776
No 128
>3ozb_A Methylthioadenosine phosphorylase; 5'-methylthioinosine,phosphorylase, transferase; HET: HPA; 2.80A {Pseudomonas aeruginosa}
Probab=37.85 E-value=91 Score=21.35 Aligned_cols=57 Identities=19% Similarity=0.238 Sum_probs=35.4
Q ss_pred CCCcccCCCCCCeeeeccCCCCEEEEEeccccchH-----H--HHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 6 GVPQHPAKEKPPISVVGDVGGRVAIMVDDMVDDVH-----S--FVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 6 ~~~~~~~~~~~~~~i~g~v~gk~vlivDDii~TG~-----T--l~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
.+||.. ...-.+.|.++|+.|+++-- .-.|. . ....+..|++.|++.+....+-+-+
T Consensus 41 ~tpyg~---~s~~l~~G~l~G~~Vv~l~r-hG~gh~~~~~~V~~~a~i~~l~~~Gv~~II~tgaaGgl 104 (259)
T 3ozb_A 41 ETPYGA---PSAPLQRGRYAGREVLFLAR-HGHPHRFPPHQVNYRANLWALKQAGAEAVIAVNAVGGI 104 (259)
T ss_dssp CBTTBC---CSSCBEEEEETTEEEEEEES-SCC---CCGGGSCHHHHHHHHHHHTCSEEEEEEEEEEC
T ss_pred EccCCC---CcceEEEEEECCEEEEEEeC-cCCCcccChhhcchHHHHHHHHHcCCCEEEEccceeec
Confidence 556654 22334578889999998751 11122 1 3334789999999998777655533
No 129
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=37.14 E-value=62 Score=23.22 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=27.0
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYV 59 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~ 59 (84)
+++.+++... +|.+-..++..|+..|...++.
T Consensus 202 ~~~~ivvyC~---~G~~a~~~~~~L~~~G~~~v~~ 233 (423)
T 2wlr_A 202 HDTTVILYGR---DVYAAARVAQIMLYAGVKDVRL 233 (423)
T ss_dssp TTSEEEEECS---SHHHHHHHHHHHHHHTCSCEEE
T ss_pred CCCeEEEECC---CchHHHHHHHHHHHcCCCCeEE
Confidence 5788988876 8999999999999999987763
No 130
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=36.69 E-value=44 Score=22.44 Aligned_cols=52 Identities=12% Similarity=-0.042 Sum_probs=34.4
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHcCCCeEE-EEEEeccC-CCC-HHHHhhcCCC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIY-VLATHGLL-SSD-APLLIEESPI 79 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~-~~~~h~~~-s~~-a~~~l~~~~i 79 (84)
.-+|-+||--++..| ..+.+.|+++|++-.+ .+....+- .++ ..+++.++|.
T Consensus 27 ~VaLTFDDG~~~~~t-~~il~iL~~~~v~ATF~Fv~g~~~~~~p~~~~~~i~~~Gh 81 (254)
T 2vyo_A 27 MIAINFVDGPVRGVT-DRILNTLDELGVKATFSFTVNQKAVGNVGQLYRRAVEEGH 81 (254)
T ss_dssp EEEEEEESCCCTTHH-HHHHHHHHHHTCCCEEEECCSSCCCGGGTHHHHHHHHTTC
T ss_pred EEEEEEeCCCCcccH-HHHHHHHHHcCCCEEEEEccChHHhHCHHHHHHHHHhCCC
Confidence 357889998765444 5678999999988666 44432221 134 6777777764
No 131
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=36.23 E-value=40 Score=21.88 Aligned_cols=30 Identities=17% Similarity=0.021 Sum_probs=24.6
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIY 58 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~ 58 (84)
+++.+++.- .+|.+-..++..|++.| ..++
T Consensus 183 ~~~~iv~~C---~~G~rs~~a~~~L~~~G-~~v~ 212 (230)
T 2eg4_A 183 PGQEVGVYC---HSGARSAVAFFVLRSLG-VRAR 212 (230)
T ss_dssp TTCEEEEEC---SSSHHHHHHHHHHHHTT-CEEE
T ss_pred CCCCEEEEc---CChHHHHHHHHHHHHcC-CCcE
Confidence 577888764 68999999999999999 7665
No 132
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=36.19 E-value=49 Score=22.88 Aligned_cols=33 Identities=12% Similarity=0.077 Sum_probs=27.4
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEE
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYV 59 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~ 59 (84)
-+++.++++. ++|..-..++..|++.|.+.|+.
T Consensus 179 ~kdk~IVvyC---~~G~RS~~Aa~~L~~~Gf~nV~~ 211 (265)
T 4f67_A 179 KKDKKIAMFC---TGGIRCEKTTAYMKELGFEHVYQ 211 (265)
T ss_dssp GTTSCEEEEC---SSSHHHHHHHHHHHHHTCSSEEE
T ss_pred CCCCeEEEEe---CCChHHHHHHHHHHHcCCCCEEE
Confidence 3678898886 48888888999999999987764
No 133
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=35.93 E-value=35 Score=22.30 Aligned_cols=52 Identities=15% Similarity=0.132 Sum_probs=33.5
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCC-CC-HHHHhhcCCC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLS-SD-APLLIEESPI 79 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s-~~-a~~~l~~~~i 79 (84)
.-+|-+||-..+..| ..+...|+++|++-.++++.-.+-. +. .++++.++|.
T Consensus 6 ~V~LTFDDG~~~~~t-~~il~iL~~~~v~ATfFv~g~~~~~~p~~~~~~~~~~Gh 59 (216)
T 2c71_A 6 LVALTFDDGPDNVLT-ARVLDKLDKYNVKATFMVVGQRVNDSTAAIIRRMVNSGH 59 (216)
T ss_dssp EEEEEEESCCCHHHH-HHHHHHHHHHTCCCEEEECGGGCSHHHHHHHHHHHHTTC
T ss_pred EEEEEEecCCCcccH-HHHHHHHHHcCCCEEEEEEChhhhhCHHHHHHHHHHCCC
Confidence 357889998765443 4678999999998776655322211 12 5667766664
No 134
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=35.90 E-value=62 Score=20.33 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=21.1
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEE
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIY 58 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~ 58 (84)
..+.+|+||||=-.....+ .+.|++.|...+.
T Consensus 59 ~~~~~ILiVdDd~~~~~~l---~~~L~~~g~~~v~ 90 (206)
T 3mm4_A 59 LRGKRVLVVDDNFISRKVA---TGKLKKMGVSEVE 90 (206)
T ss_dssp TTTCEEEEECSCHHHHHHH---HHHHHHTTCSEEE
T ss_pred cCCCEEEEEeCCHHHHHHH---HHHHHHcCCCeee
Confidence 4578999999965544444 4567777765443
No 135
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A*
Probab=35.88 E-value=23 Score=24.52 Aligned_cols=41 Identities=10% Similarity=-0.058 Sum_probs=26.9
Q ss_pred ccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 36 VDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 36 i~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
+.||+|....++.|.+.. ..+..+++ -|....+++.+.|+.
T Consensus 38 LGtGST~~~~i~~L~~~~-~~i~~~V~---tS~~t~~~~~~~Gi~ 78 (239)
T 3uw1_A 38 VGTGSTANCFIDALAAVK-DRYRGAVS---SSVATTERLKSHGIR 78 (239)
T ss_dssp ECCSHHHHHHHHHHHTTG-GGSCEEEE---SSHHHHHHHHHTTCC
T ss_pred ECccHHHHHHHHHHHhhh-ccceEEeC---CcHHHHHHHHHcCCc
Confidence 479999999999998863 23332221 234566677777764
No 136
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=35.85 E-value=15 Score=25.14 Aligned_cols=40 Identities=18% Similarity=0.105 Sum_probs=26.2
Q ss_pred ccchHHHHHHHHHHHHc----CCCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 36 VDDVHSFVAAAEVLKDR----GAYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 36 i~TG~Tl~~~~~~L~~~----ga~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
+.||+|....++.|.+. +. .+.++++ |....+++.+.++.
T Consensus 24 LGsGST~~~~i~~L~~~~~~~~~-~i~~Vtt----S~~t~~~l~~~Gi~ 67 (225)
T 3l7o_A 24 LGTGSTAYYFVEEVGRRVQEEGL-QVIGVTT----SSRTTAQAQALGIP 67 (225)
T ss_dssp ECCSTTHHHHHHHHHHHHHHHCC-CCEEEES----SHHHHHHHHHHTCC
T ss_pred ECCcHHHHHHHHHHHHhhhhcCC-CEEEEcC----CHHHHHHHhccCce
Confidence 46999999999988775 33 4555442 33555666666654
No 137
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=35.74 E-value=1e+02 Score=20.84 Aligned_cols=38 Identities=24% Similarity=0.273 Sum_probs=25.6
Q ss_pred CCEEEEEecccc-chHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 26 GRVAIMVDDMVD-DVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 26 gk~vlivDDii~-TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
++.+++|||+=. +..+.....+.+.+.....+.+++++
T Consensus 119 ~~~vliiDe~~~l~~~~~~~Ll~~le~~~~~~~~Il~~~ 157 (373)
T 1jr3_A 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATT 157 (373)
T ss_dssp SSEEEEEECGGGSCHHHHHHHHHHHHSCCSSEEEEEEES
T ss_pred CeEEEEEECcchhcHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 468999999732 34566677777777655666666654
No 138
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=35.72 E-value=50 Score=21.74 Aligned_cols=38 Identities=24% Similarity=0.283 Sum_probs=24.0
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHcCCC--eE-EEEEEeccC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDRGAY--KI-YVLATHGLL 66 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~ga~--~v-~~~~~h~~~ 66 (84)
...+|||--.. .......+.|++.|.+ .+ .++.||.-.
T Consensus 64 ~~~iLID~G~~--~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~ 104 (294)
T 3m8t_A 64 QGLILMDTAMP--QSTGMIKDNIAKLGFKVADIKLILNTHAHL 104 (294)
T ss_dssp TEEEEECCCCG--GGHHHHHHHHHHTTCCGGGEEEEECSCCCH
T ss_pred CceEEEECCCc--hhHHHHHHHHHHcCCCHHHCcEEEECCCCc
Confidence 34566664432 2455677889998866 34 577899743
No 139
>2p4s_A Purine nucleoside phosphorylase; transferase; HET: DIH; 2.20A {Anopheles gambiae}
Probab=35.70 E-value=1.3e+02 Score=22.05 Aligned_cols=48 Identities=13% Similarity=0.068 Sum_probs=34.3
Q ss_pred eeeeccCCCCEEEEEecccc------chHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 18 ISVVGDVGGRVAIMVDDMVD------DVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 18 ~~i~g~v~gk~vlivDDii~------TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
-.+.|.++|+.|+++- -.- .-..+...++.|++.|++.+....+-+-+
T Consensus 152 ~l~~G~l~G~~Vvvm~-GrgH~yeg~~v~~v~a~i~llk~lGV~~II~tgaaGgL 205 (373)
T 2p4s_A 152 RLVFGYLAGVPVMCMQ-GRFHHYEGYPLAKCAMPVRVMHLIGCTHLIATNAAGGA 205 (373)
T ss_dssp EEEEEEETTEEEEEEE-SCCCGGGTCCHHHHHHHHHHHHHHTCCEEEEEEEEEEC
T ss_pred eeEEEEECCEEEEEEe-CCCcCCCCCCHHHHHHHHHHHHHcCCCEEEEeccEeec
Confidence 4567889999999987 222 12344567899999999998877665543
No 140
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=35.55 E-value=60 Score=23.72 Aligned_cols=31 Identities=13% Similarity=-0.023 Sum_probs=25.5
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYV 59 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~ 59 (84)
+++.++++. .+|..-..++..|++.|. .++.
T Consensus 523 ~~~~iv~~c---~~g~rs~~a~~~l~~~G~-~v~~ 553 (565)
T 3ntd_A 523 KDKEIIIFS---QVGLRGNVAYRQLVNNGY-RARN 553 (565)
T ss_dssp TTSEEEEEC---SSSHHHHHHHHHHHHTTC-CEEE
T ss_pred CcCeEEEEe---CCchHHHHHHHHHHHcCC-CEEE
Confidence 578898886 688888899999999998 5553
No 141
>2pjm_A Ribose-5-phosphate isomerase A; 3D-structure, structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; 1.78A {Methanocaldococcus jannaschii} PDB: 3ixq_A*
Probab=35.39 E-value=25 Score=23.96 Aligned_cols=41 Identities=17% Similarity=0.151 Sum_probs=26.4
Q ss_pred ccchHHHHHHHHHHHHcC---CCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 36 VDDVHSFVAAAEVLKDRG---AYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 36 i~TG~Tl~~~~~~L~~~g---a~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
++||+|....++.|.+.. -..+.++++ |.+..+++.+.++.
T Consensus 26 lgsGST~~~~~~~L~~~~~~~~l~itvVtn----S~~~a~~l~~~gi~ 69 (226)
T 2pjm_A 26 LGTGSTAALFIRELGNRIREEELTVFGIPT----SFEAKMLAMQYEIP 69 (226)
T ss_dssp ECCSHHHHHHHHHHHHHHHHHTCCCEEEES----SHHHHHHHHHTTCC
T ss_pred ECCCHHHHHHHHHHHhhhhccCCcEEEEeC----cHHHHHHHHhcCCe
Confidence 469999999999997652 124454442 33555667776664
No 142
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=34.84 E-value=17 Score=22.07 Aligned_cols=47 Identities=13% Similarity=0.032 Sum_probs=29.5
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCC-CCHHHHhhcCCCC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLS-SDAPLLIEESPID 80 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s-~~a~~~l~~~~i~ 80 (84)
.-+++||||=-.....+.. .|++.|...+..+. + ..|.+.+.+...+
T Consensus 8 ~~rILiVdD~~~~~~~l~~---~L~~~G~~v~~~a~-----~g~eAl~~~~~~~~D 55 (123)
T 2lpm_A 8 RLRVLVVEDESMIAMLIED---TLCELGHEVAATAS-----RMQEALDIARKGQFD 55 (123)
T ss_dssp CCCEEEESSSTTTSHHHHH---HHHHHCCCCCBCSC-----CHHHHHHHHHHCCSS
T ss_pred CCEEEEEeCCHHHHHHHHH---HHHHCCCEEEEEEC-----CHHHHHHHHHhCCCC
Confidence 3479999998888777764 56777876332111 1 2566766665443
No 143
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=34.55 E-value=44 Score=22.47 Aligned_cols=46 Identities=11% Similarity=0.265 Sum_probs=28.1
Q ss_pred CCCEEEEEe-ccc--cchHH-----HHHHH-HHHHHcCCCeEEEEEEeccCCCCH
Q psy15570 25 GGRVAIMVD-DMV--DDVHS-----FVAAA-EVLKDRGAYKIYVLATHGLLSSDA 70 (84)
Q Consensus 25 ~gk~vlivD-Dii--~TG~T-----l~~~~-~~L~~~ga~~v~~~~~h~~~s~~a 70 (84)
+||+|+|+= +-. .|.++ ..+-+ +.+++.|...|+++++-..|.-+|
T Consensus 68 k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~kGvd~I~ciSVND~FVm~A 122 (199)
T 4h86_A 68 ENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKEVDQVIVVTVDNPFANQA 122 (199)
T ss_dssp HCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHSCCCEEEEEESSCHHHHHH
T ss_pred CCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhcCCcEEEEEEcCCHHHHHH
Confidence 599998874 333 23332 22333 345788999999999755544333
No 144
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=34.51 E-value=1.1e+02 Score=20.71 Aligned_cols=40 Identities=3% Similarity=0.097 Sum_probs=28.2
Q ss_pred CCEEEEEecccc-chHHHHHHHHHHHHcCCCeEEEEEEecc
Q psy15570 26 GRVAIMVDDMVD-DVHSFVAAAEVLKDRGAYKIYVLATHGL 65 (84)
Q Consensus 26 gk~vlivDDii~-TG~Tl~~~~~~L~~~ga~~v~~~~~h~~ 65 (84)
+.+++|+|+.-. +..+.....+.+.+.......++++|..
T Consensus 134 ~~~vlilDE~~~L~~~~~~~L~~~le~~~~~~~~Il~t~~~ 174 (354)
T 1sxj_E 134 RYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSM 174 (354)
T ss_dssp CCEEEEEECTTSSCHHHHHHHHHHHHHSTTTEEEEEEESCS
T ss_pred CCeEEEEeCccccCHHHHHHHHHHHHhhcCCCEEEEEeCCH
Confidence 567999998644 2344566677787776667778888874
No 145
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=34.26 E-value=23 Score=26.00 Aligned_cols=39 Identities=15% Similarity=0.149 Sum_probs=27.5
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCC
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLS 67 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s 67 (84)
.++.++|||.- .......+.+++.|.+...++.||.-+.
T Consensus 46 ~~~~~vlID~g----~~~~~~~~~l~~~g~~i~~Il~TH~H~D 84 (466)
T 3r2u_A 46 KTGEAMIIDPI----RDLSSYIRVADEEGLTITHAAETHIHAD 84 (466)
T ss_dssp TTCEEEEESCC----SCCHHHHHHHHHHTCEEEEEECSSCCSS
T ss_pred CCCEEEEEcCC----CCHHHHHHHHHHCCCeeeEEEECCCChh
Confidence 34556666654 4455667788888988778889998664
No 146
>1vmk_A Purine nucleoside phosphorylase; TM1596, structural genomics protein structure initiative, PSI, joint center for structu genomics; HET: GUN; 2.01A {Thermotoga maritima} SCOP: c.56.2.1
Probab=34.18 E-value=1.2e+02 Score=21.11 Aligned_cols=49 Identities=14% Similarity=0.198 Sum_probs=33.7
Q ss_pred eeeeccCCCCEEEEEecccc-----chHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 18 ISVVGDVGGRVAIMVDDMVD-----DVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 18 ~~i~g~v~gk~vlivDDii~-----TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
-.+.|.++|+.|+++--+-- +-+.+...+..|++.|++.+....+-+-+
T Consensus 74 ~l~~G~l~G~~Vv~~~GrgH~yeG~~p~~V~~~i~~l~~lGv~~II~tgaaG~l 127 (277)
T 1vmk_A 74 KLVFGRISDKPVMIMAGRFHLYEGHDPATVAFPVYLAKYVGVKGVVVTNAAGAI 127 (277)
T ss_dssp EEEEEEETTEEEEEEESCCCGGGTCCHHHHHHHHHHHHHHTCCEEEEEEEEEEC
T ss_pred eEEEEEECCEEEEEEecCCcccCCCCHHHHHHHHHHHHHcCCCEEEEecceecC
Confidence 34678899999999872210 22345557899999999988776655533
No 147
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=34.03 E-value=30 Score=23.13 Aligned_cols=36 Identities=25% Similarity=0.247 Sum_probs=24.0
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
++.+++||. |. .....+.|++.|.+.-.++.||.-.
T Consensus 22 ~~~~~lID~----g~-~~~i~~~l~~~g~~i~~Il~TH~H~ 57 (254)
T 1xm8_A 22 TGTVGVVDP----SE-AEPIIDSLKRSGRNLTYILNTHHHY 57 (254)
T ss_dssp TCCEEEECC----SS-HHHHHHHHHHHTCCCCEEECSSCCH
T ss_pred CCEEEEEeC----CC-HHHHHHHHHHcCCCccEEEECCCCC
Confidence 345777775 32 2345677888887666788899854
No 148
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=33.92 E-value=46 Score=23.06 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=27.5
Q ss_pred cchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHH
Q psy15570 37 DDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLL 73 (84)
Q Consensus 37 ~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~ 73 (84)
++=.-+.+.++.+.+.|+..+...-|||+..+.....
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~ 192 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRR 192 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHH
Confidence 3445566667777799999999999999987754433
No 149
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=33.87 E-value=71 Score=22.07 Aligned_cols=33 Identities=15% Similarity=0.060 Sum_probs=25.0
Q ss_pred CCCEEEEEeccccchH-HHHHHHHHHHHcCCCeEEEE
Q psy15570 25 GGRVAIMVDDMVDDVH-SFVAAAEVLKDRGAYKIYVL 60 (84)
Q Consensus 25 ~gk~vlivDDii~TG~-Tl~~~~~~L~~~ga~~v~~~ 60 (84)
+++.++++++- |. .-..++..|+..|.+.|+.+
T Consensus 110 ~~~~vVvyc~~---g~~~a~~a~~~L~~~G~~~V~~L 143 (318)
T 3hzu_A 110 RDDTVVIYGDK---SNWWAAYALWVFTLFGHADVRLL 143 (318)
T ss_dssp TTCEEEEECSG---GGHHHHHHHHHHHHTTCSCEEEE
T ss_pred CCCeEEEECCC---CCccHHHHHHHHHHcCCCceEEc
Confidence 57889999763 43 56678899999999877643
No 150
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=33.70 E-value=50 Score=22.10 Aligned_cols=36 Identities=22% Similarity=0.243 Sum_probs=24.8
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
++.++|||.- . .....+.|++.|.....++.||.-+
T Consensus 22 ~~~~vlID~G--~---~~~i~~~l~~~g~~i~~IllTH~H~ 57 (260)
T 1qh5_A 22 TKEAAIVDPV--Q---PQKVVDAARKHGVKLTTVLTTHHHW 57 (260)
T ss_dssp TTEEEEESCS--S---HHHHHHHHHHHTCEEEEEECCCSSH
T ss_pred CCEEEEEcCC--C---HHHHHHHHHHcCCCccEEEeCCCCc
Confidence 4567788864 2 2445677888887666778899854
No 151
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=33.59 E-value=22 Score=24.02 Aligned_cols=53 Identities=13% Similarity=0.179 Sum_probs=35.0
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccC-CCCHHHHhhcCCC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLL-SSDAPLLIEESPI 79 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~-s~~a~~~l~~~~i 79 (84)
..-+|-+||-..++.| ..+.+.|+++|++-.+.++...+- .++..+++.+.|.
T Consensus 55 k~V~LTFDDG~~~~~t-~~il~iL~~~~v~ATfFv~g~~~~~~p~~~~~~~~~Gh 108 (247)
T 2j13_A 55 KDIYLTFDNGYENGYT-GKILDVLKEKKVPATFFVTGHYIKTQKDLLLRMKDEGH 108 (247)
T ss_dssp CEEEEEEEESSCCSCH-HHHHHHHHHHTCCEEEEECHHHHHHCHHHHHHHHHTTC
T ss_pred CEEEEEEeCCCCcccH-HHHHHHHHHcCCCEEEEEeChhhhhCHHHHHHHHHCCC
Confidence 3457789998877765 457899999999876655532221 1345666766664
No 152
>3g8q_A Predicted RNA-binding protein, contains thump domain; cytidine deaminase, ferredoxin-like domain; 2.40A {Methanopyrus kandleri}
Probab=33.39 E-value=29 Score=24.67 Aligned_cols=40 Identities=15% Similarity=0.211 Sum_probs=29.8
Q ss_pred chHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 38 DVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 38 TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
|..--..|+.++.++|.++|.+.+. -.+.+.+.|.++||+
T Consensus 63 TLEPC~MCAgAII~AGIkRVVYGa~---~~G~G~e~LreAGIE 102 (278)
T 3g8q_A 63 TARPCLYCARELAEAGVAGVVYLGR---GRGLGPYYLARSGVE 102 (278)
T ss_dssp SSCCCHHHHHHHHTTTCCEEEEEEC---SSCCHHHHHHTTTCE
T ss_pred eCCchHHHHHHHHHhCCCEEEEEec---CCChhHHHHHHCCCE
Confidence 4444455889999999998877763 245678899998875
No 153
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=33.27 E-value=65 Score=17.88 Aligned_cols=27 Identities=19% Similarity=0.165 Sum_probs=16.8
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAY 55 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~ 55 (84)
+++++|+||=-.....+ ...|++.|..
T Consensus 2 ~~~ilivdd~~~~~~~l---~~~L~~~g~~ 28 (120)
T 3f6p_A 2 DKKILVVDDEKPIADIL---EFNLRKEGYE 28 (120)
T ss_dssp CCEEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred CCeEEEEECCHHHHHHH---HHHHHhCCEE
Confidence 35789999865444444 3556666753
No 154
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=33.08 E-value=1.3e+02 Score=21.18 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=32.2
Q ss_pred eeeccCCCCEEEEEeccccch-HH---HHHHHHHHHHcCCCeEEEEEEe
Q psy15570 19 SVVGDVGGRVAIMVDDMVDDV-HS---FVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 19 ~i~g~v~gk~vlivDDii~TG-~T---l~~~~~~L~~~ga~~v~~~~~h 63 (84)
++...+.|++|+|+-.....- .. +.-.+..+++.+++++.++..+
T Consensus 49 ~i~e~vrg~dv~iiqs~~~~~nd~lmell~~~~a~~~~~a~~i~av~pY 97 (317)
T 1dku_A 49 NIEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVIPY 97 (317)
T ss_dssp EECSCCTTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred EecCCCCCCEEEEEcCCCCCCcHHHHHHHHHHHHhhccCcceEEEEEEc
Confidence 455678999999998765432 22 3335578889999999888743
No 155
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=32.96 E-value=45 Score=22.24 Aligned_cols=32 Identities=19% Similarity=0.107 Sum_probs=24.2
Q ss_pred CCCEEEEEeccccchHH-HHHHHHHHHHcCCCeEEE
Q psy15570 25 GGRVAIMVDDMVDDVHS-FVAAAEVLKDRGAYKIYV 59 (84)
Q Consensus 25 ~gk~vlivDDii~TG~T-l~~~~~~L~~~ga~~v~~ 59 (84)
+++.+++.++ +|.. ...++..|++.|.+.|+.
T Consensus 85 ~~~~ivvyc~---~g~~~a~~a~~~L~~~G~~~v~~ 117 (280)
T 1urh_A 85 QDKHLIVYDE---GNLFSAPRAWWMLRTFGVEKVSI 117 (280)
T ss_dssp TTSEEEEECS---SSCSSHHHHHHHHHHTTCSCEEE
T ss_pred CCCeEEEECC---CCCccHHHHHHHHHHcCCCCEEE
Confidence 5788999875 4554 567788999999987753
No 156
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=32.92 E-value=92 Score=20.58 Aligned_cols=32 Identities=16% Similarity=0.009 Sum_probs=23.8
Q ss_pred CCCEEEEEeccccch-HHHHHHHHHHHHcCCCeEEE
Q psy15570 25 GGRVAIMVDDMVDDV-HSFVAAAEVLKDRGAYKIYV 59 (84)
Q Consensus 25 ~gk~vlivDDii~TG-~Tl~~~~~~L~~~ga~~v~~ 59 (84)
+++.++++++ +| .....++..|+..|...|+.
T Consensus 76 ~~~~vvvyc~---~g~~~s~~a~~~L~~~G~~~v~~ 108 (277)
T 3aay_A 76 NEDTVILYGG---NNNWFAAYAYWYFKLYGHEKVKL 108 (277)
T ss_dssp TTSEEEEECS---GGGHHHHHHHHHHHHTTCCSEEE
T ss_pred CCCeEEEECC---CCCchHHHHHHHHHHcCCCcEEE
Confidence 4788999875 34 34567788999999987763
No 157
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=32.85 E-value=47 Score=22.80 Aligned_cols=35 Identities=9% Similarity=0.029 Sum_probs=24.9
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYV 59 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~ 59 (84)
+++.|++.|+--..|.....+...|+..|.+.|+.
T Consensus 106 ~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~ 140 (302)
T 3olh_A 106 AATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSL 140 (302)
T ss_dssp SSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEE
T ss_pred CCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEE
Confidence 57789999863223344567788999999987654
No 158
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=32.52 E-value=69 Score=23.36 Aligned_cols=32 Identities=19% Similarity=0.079 Sum_probs=26.3
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 60 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~ 60 (84)
.++.++++|| ++...++...|++.|...+..+
T Consensus 335 ~~~~vvly~~----~~~a~~a~~~L~~~G~~~v~~~ 366 (466)
T 3r2u_A 335 YDQEINLIGD----YHLVSKATHTLQLIGYDDIAGY 366 (466)
T ss_dssp TTSCEEEESC----HHHHHHHHHHHHTTTCCCEEEE
T ss_pred CCCeEEEEEC----CchHHHHHHHhhhhhccccccc
Confidence 4678999988 4467889999999999987764
No 159
>3nm6_B MTA/SAH nucleosidase; hydrolase; HET: ADE; 1.60A {Helicobacter pylori} SCOP: c.56.2.0 PDB: 3nm5_A* 3nm4_A* 4ffs_A*
Probab=32.52 E-value=1e+02 Score=19.89 Aligned_cols=47 Identities=19% Similarity=0.236 Sum_probs=29.7
Q ss_pred eeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 20 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 20 i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
+.|.++|++|+++---+-.-..-..+.+.++..|++.+..+.+-|-+
T Consensus 36 ~~G~~~g~~v~v~~~G~G~~~aa~~~~~l~~~~~~~~iI~~G~aG~l 82 (230)
T 3nm6_B 36 HKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSL 82 (230)
T ss_dssp EEEEETTEEEEEEECCSSHHHHHHHHHHHHHHHCCSEEEEEEEEEEC
T ss_pred EEEEECCEEEEEEECCCCHHHHHHHHHHHHHhCCCCEEEEEEeecCC
Confidence 46788999999886444333333333456678899987766554544
No 160
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=32.31 E-value=46 Score=22.82 Aligned_cols=52 Identities=19% Similarity=0.157 Sum_probs=34.7
Q ss_pred CEEEEEe-ccccchH------HHHHHHHHHHHc-CCCeEEEEEEec-cCCCCHHHHhhcCC
Q psy15570 27 RVAIMVD-DMVDDVH------SFVAAAEVLKDR-GAYKIYVLATHG-LLSSDAPLLIEESP 78 (84)
Q Consensus 27 k~vlivD-Dii~TG~------Tl~~~~~~L~~~-ga~~v~~~~~h~-~~s~~a~~~l~~~~ 78 (84)
+.+.+++ |....|+ .+..+++.+++. |...+....+|+ .++.+.++.|.+++
T Consensus 51 ~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~~ir~~~~~p~~l~~e~l~~l~~~g 111 (304)
T 2qgq_A 51 KEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISAMLELD 111 (304)
T ss_dssp CEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSCEEEECCCCGGGCCHHHHHHHHHCT
T ss_pred cEEEEEeEcccccCCCCCcHHHHHHHHHHHHhcCCCcEEEEeeeecccCCHHHHHHHHhCC
Confidence 6677776 4444443 477888888887 665565555665 34566788888776
No 161
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=31.88 E-value=69 Score=22.97 Aligned_cols=38 Identities=18% Similarity=0.051 Sum_probs=30.7
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
.|.++|.++.++=|. +.+..+.+..+...|+. +.+++.
T Consensus 152 ~g~l~glkva~vGD~---~rva~Sl~~~~~~~G~~-v~~~~P 189 (323)
T 3gd5_A 152 FGRLAGLKLAYVGDG---NNVAHSLLLGCAKVGMS-IAVATP 189 (323)
T ss_dssp HSCCTTCEEEEESCC---CHHHHHHHHHHHHHTCE-EEEECC
T ss_pred hCCCCCCEEEEECCC---CcHHHHHHHHHHHcCCE-EEEECC
Confidence 367899999999998 78888888889999974 555553
No 162
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A {Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB: 1lk7_A*
Probab=31.69 E-value=39 Score=22.95 Aligned_cols=41 Identities=24% Similarity=0.212 Sum_probs=25.1
Q ss_pred ccchHHHHHHHHHHHHc---C-CCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 36 VDDVHSFVAAAEVLKDR---G-AYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 36 i~TG~Tl~~~~~~L~~~---g-a~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
++||+|....++.|.+. + -+.+.++++ |.+....+.+.+++
T Consensus 26 LdsGST~~~~a~~L~~~~~~~~l~~itvVTn----S~~~a~~l~~~gi~ 70 (229)
T 1lk5_A 26 LGTGSTTAYFIKLLGEKLKRGEISDIVGVPT----SYQAKLLAIEHDIP 70 (229)
T ss_dssp ECCSHHHHHHHHHHHHHHHTTSSCSCEEEES----SHHHHHHHHHTTCC
T ss_pred EcChHHHHHHHHHHhhhhhhccCCCEEEECC----cHHHHHHHHhCCCe
Confidence 46999999999999654 2 213554442 23555555555543
No 163
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=31.32 E-value=98 Score=22.52 Aligned_cols=34 Identities=12% Similarity=0.210 Sum_probs=28.3
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEE
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 61 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~ 61 (84)
..||+|++| -.|.|-..++..+.+.|+++|..+.
T Consensus 262 ~~gk~VvVI----GgG~~a~d~A~~~~r~Ga~~Vtiv~ 295 (456)
T 2vdc_G 262 AAGKHVVVL----GGGDTAMDCVRTAIRQGATSVKCLY 295 (456)
T ss_dssp CCCSEEEEE----CSSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cCCCEEEEE----CCChhHHHHHHHHHHcCCCEEEEEE
Confidence 458899886 7888999999999999998887665
No 164
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=30.91 E-value=45 Score=19.58 Aligned_cols=44 Identities=18% Similarity=0.012 Sum_probs=28.5
Q ss_pred CCCEEEEEeccccchHH--HHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 25 GGRVAIMVDDMVDDVHS--FVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 25 ~gk~vlivDDii~TG~T--l~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
+++.++++.. +|.. -..++..|++.|.+ ++.+ ..+.....+.+.
T Consensus 70 ~~~~ivvyC~---~g~r~~s~~a~~~L~~~G~~-v~~l-------~GG~~~W~~~~~ 115 (124)
T 3flh_A 70 PAKTYVVYDW---TGGTTLGKTALLVLLSAGFE-AYEL-------AGALEGWKGMQL 115 (124)
T ss_dssp TTSEEEEECS---SSSCSHHHHHHHHHHHHTCE-EEEE-------TTHHHHHHHTTC
T ss_pred CCCeEEEEeC---CCCchHHHHHHHHHHHcCCe-EEEe-------CCcHHHHHHcCC
Confidence 4778888764 5554 56788899999984 4322 355666655543
No 165
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=30.90 E-value=89 Score=22.01 Aligned_cols=42 Identities=26% Similarity=0.288 Sum_probs=33.6
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEec
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG 64 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~ 64 (84)
.|.++|.++.++=|+.. +.+..+.+..+...|+. +.+++.-+
T Consensus 141 ~g~l~gl~va~vGDl~~-~rva~Sl~~~~~~~g~~-v~~~~P~~ 182 (291)
T 3d6n_B 141 FGEVKDLRVLYVGDIKH-SRVFRSGAPLLNMFGAK-IGVCGPKT 182 (291)
T ss_dssp HSCCTTCEEEEESCCTT-CHHHHHHHHHHHHTTCE-EEEESCGG
T ss_pred hCCcCCcEEEEECCCCC-CchHHHHHHHHHHCCCE-EEEECCch
Confidence 46789999999999876 88999999999999974 55555433
No 166
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=30.87 E-value=73 Score=17.75 Aligned_cols=26 Identities=23% Similarity=0.169 Sum_probs=16.0
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHcCCC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDRGAY 55 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~ga~ 55 (84)
++++++||=-..... ....|++.|..
T Consensus 3 ~~ILivdd~~~~~~~---l~~~l~~~g~~ 28 (122)
T 3gl9_A 3 KKVLLVDDSAVLRKI---VSFNLKKEGYE 28 (122)
T ss_dssp CEEEEECSCHHHHHH---HHHHHHHTTCE
T ss_pred ceEEEEeCCHHHHHH---HHHHHHHCCcE
Confidence 578999985544433 33556666753
No 167
>3dp9_A MTA/SAH nucleosidase; vibrio cholerae 5'-methylthioadenosine/S-adenosyl homocystei nucleosidase, butylthio dadme immucillin A, MTAN, hydrolase; HET: BIG; 2.30A {Vibrio cholerae} SCOP: c.56.2.1
Probab=30.74 E-value=1.1e+02 Score=19.76 Aligned_cols=48 Identities=10% Similarity=0.196 Sum_probs=29.7
Q ss_pred eeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCC
Q psy15570 20 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLS 67 (84)
Q Consensus 20 i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s 67 (84)
+.|.++|+.|+++---+-.-..-..+.+.++..|++.+..+.+-|-+.
T Consensus 34 ~~G~~~g~~v~v~~~GiG~~~aa~~~~~li~~~~~~~iI~~G~aG~l~ 81 (231)
T 3dp9_A 34 YSGQIQGVDVVLLQSGIGKVSAALGTALLISQYAPDVVINTGSAGGFD 81 (231)
T ss_dssp EEEEETTEEEEEEECCSSHHHHHHHHHHHHHHHCCSEEEEEEEEEECS
T ss_pred EEEEECCEEEEEEECCCCHHHHHHHHHHHHHhcCCCEEEEEEEeeccC
Confidence 467889999998754433222323333556778999877666555443
No 168
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=30.68 E-value=16 Score=23.29 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=20.6
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEec
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG 64 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~ 64 (84)
+..+|||--..+. ...+.|++.| +.-+++.||.
T Consensus 33 ~~~iliD~g~~~~----~~~~~l~~~g-~i~~ii~TH~ 65 (201)
T 2p97_A 33 EGNILIDPVALSN----HDWKHLESLG-GVVWIVLTNS 65 (201)
T ss_dssp TCCEEESCCCCCH----HHHHHHHHTT-CCSEEECSSG
T ss_pred CeeEEEECCCCcH----HHHHHHHhcC-CCCEEEECCc
Confidence 3456666553222 4456778887 5457788998
No 169
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=30.32 E-value=74 Score=21.00 Aligned_cols=39 Identities=15% Similarity=0.103 Sum_probs=23.3
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHc-CCCeEEEEEEeccC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDR-GAYKIYVLATHGLL 66 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~-ga~~v~~~~~h~~~ 66 (84)
+..+|||--... .......+.+++. |...-.++.||.-.
T Consensus 77 ~~~iLID~G~~~-~~~~~l~~~l~~~~g~~i~~VilTH~H~ 116 (265)
T 2y8b_A 77 DELLLIDTAWGA-KNTVALLAEIEKQIGLPVTRSISTHFHD 116 (265)
T ss_dssp TEEEEESCCSSH-HHHHHHHHHHHHHTCSCEEEEECSSSSH
T ss_pred CeEEEEeCCCCH-HHHHHHHHHHHHhcCCCeEEEEeCCCCh
Confidence 445555544321 2345566778877 76555788899743
No 170
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=30.28 E-value=1.1e+02 Score=20.30 Aligned_cols=32 Identities=13% Similarity=-0.115 Sum_probs=25.6
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHH-HcCCCeEEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLK-DRGAYKIYV 59 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~-~~ga~~v~~ 59 (84)
+++.+++.. .+|.+-..++..|+ ..|.+.++.
T Consensus 232 ~~~~ivvyC---~~G~rs~~a~~~L~~~~G~~~v~~ 264 (285)
T 1uar_A 232 KDKDIVVYC---RIAERSSHSWFVLKYLLGYPHVKN 264 (285)
T ss_dssp TTSEEEEEC---SSHHHHHHHHHHHHTTSCCSCEEE
T ss_pred CCCCEEEEC---CchHHHHHHHHHHHHHcCCCCcce
Confidence 578888876 57888888889999 899887664
No 171
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=30.12 E-value=53 Score=22.03 Aligned_cols=52 Identities=17% Similarity=0.135 Sum_probs=33.6
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEec---cC--C-CCHHHHhhcCCC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG---LL--S-SDAPLLIEESPI 79 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~---~~--s-~~a~~~l~~~~i 79 (84)
..-+|-+||--.. ....+.+.|+++|++-.+++..-. +- . ++.++++.++|.
T Consensus 42 k~V~LTFDDGp~~--~~~~il~iL~~~~vkATFFv~g~~~g~~~~~~~p~~lr~i~~~Gh 99 (254)
T 2iw0_A 42 GLVALTYDDGPFT--FTPQLLDILKQNDVRATFFVNGNNWANIEAGSNPDTIRRMRADGH 99 (254)
T ss_dssp SEEEEEEESCSCT--THHHHHHHHHHHTCCCEEEECSBSSSBTTSTTHHHHHHHHHHTTC
T ss_pred CEEEEEeccCchh--hHHHHHHHHHHcCCCEEEEEECCcccccccccCHHHHHHHHHCCC
Confidence 3457789998873 346788999999998766655322 11 1 245666666664
No 172
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=29.98 E-value=87 Score=20.12 Aligned_cols=38 Identities=18% Similarity=0.179 Sum_probs=27.3
Q ss_pred cchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcC
Q psy15570 37 DDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEES 77 (84)
Q Consensus 37 ~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~ 77 (84)
|-+.|....++.+.++|+. .+++|+....+.++.+.+.
T Consensus 62 DI~~t~~~~v~~~~~~Gad---~vtvh~~~g~~~i~~~~~~ 99 (208)
T 2czd_A 62 DIPNTNRLIARKVFGAGAD---YVIVHTFVGRDSVMAVKEL 99 (208)
T ss_dssp SCHHHHHHHHHHHHHTTCS---EEEEESTTCHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHhcCCC---EEEEeccCCHHHHHHHHHh
Confidence 4588888888999999987 4567776554556666544
No 173
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=29.97 E-value=45 Score=21.96 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=25.5
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCC---eEEEEEEeccC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAY---KIYVLATHGLL 66 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~---~v~~~~~h~~~ 66 (84)
+...+|||--.. .......+.+++.|.+ .-+++.||.-.
T Consensus 66 ~~~~iLiD~G~~--~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~ 107 (303)
T 4ax1_B 66 DAGHILVDAATP--QAGPQILANIRALGFRPEDVRAIVFSHEHF 107 (303)
T ss_dssp TTCEEEECCBST--TCHHHHHHHHHHTTCCGGGEEEEECSCSSH
T ss_pred CCcEEEEECCCc--ccHHHHHHHHHHcCCCHHHCcEEEcCCCCc
Confidence 345667776542 2455667888998876 45777899854
No 174
>1o63_A ATP phosphoribosyltransferase; structural genomics; 2.00A {Thermotoga maritima} SCOP: c.94.1.1 PDB: 1o64_A 1usy_E* 1usy_H*
Probab=29.80 E-value=21 Score=24.47 Aligned_cols=13 Identities=8% Similarity=0.238 Sum_probs=10.5
Q ss_pred EeccccchHHHHH
Q psy15570 32 VDDMVDDVHSFVA 44 (84)
Q Consensus 32 vDDii~TG~Tl~~ 44 (84)
|=|+++||+|+.+
T Consensus 146 IvDivsTG~TLra 158 (219)
T 1o63_A 146 IVDITETGRTLKE 158 (219)
T ss_dssp EEEEESSSHHHHH
T ss_pred eEEeeccHHHHHH
Confidence 4589999999764
No 175
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=29.61 E-value=47 Score=22.94 Aligned_cols=35 Identities=9% Similarity=-0.037 Sum_probs=27.9
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEE
Q psy15570 23 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 61 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~ 61 (84)
+++||+++|+ -+|+.-..++..|.+.|++.+.++.
T Consensus 114 ~l~~k~vlvl----GaGg~g~aia~~L~~~G~~~v~v~~ 148 (277)
T 3don_A 114 GIEDAYILIL----GAGGASKGIANELYKIVRPTLTVAN 148 (277)
T ss_dssp TGGGCCEEEE----CCSHHHHHHHHHHHTTCCSCCEEEC
T ss_pred CcCCCEEEEE----CCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 3568888875 5789989999999999997776654
No 176
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=29.16 E-value=75 Score=20.46 Aligned_cols=32 Identities=19% Similarity=0.348 Sum_probs=22.6
Q ss_pred EEEE-eccccchHHHHHHHHHHHHcCCCeEEEEE
Q psy15570 29 AIMV-DDMVDDVHSFVAAAEVLKDRGAYKIYVLA 61 (84)
Q Consensus 29 vliv-DDii~TG~Tl~~~~~~L~~~ga~~v~~~~ 61 (84)
++++ ||.-.+...+..+++.+++.|.+ ++++.
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~-v~~Ig 142 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVA-IDIIH 142 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEE-EEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCE-EEEEE
Confidence 5555 55644567888999999999865 45444
No 177
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=28.84 E-value=79 Score=17.52 Aligned_cols=27 Identities=19% Similarity=0.251 Sum_probs=17.6
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCCC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGAY 55 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga~ 55 (84)
+++++|+||=-.....+. +.|++.|..
T Consensus 2 ~~~ilivdd~~~~~~~l~---~~L~~~~~~ 28 (140)
T 1k68_A 2 HKKIFLVEDNKADIRLIQ---EALANSTVP 28 (140)
T ss_dssp CCEEEEECCCHHHHHHHH---HHHHTCSSC
T ss_pred CCeEEEEeCCHHHHHHHH---HHHHhcCCC
Confidence 578999998665554444 456667653
No 178
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=28.70 E-value=80 Score=17.52 Aligned_cols=29 Identities=17% Similarity=0.124 Sum_probs=19.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCC
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAY 55 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~ 55 (84)
..+++++|+||=-.....+. +.|++.|..
T Consensus 5 ~~~~~ilivdd~~~~~~~l~---~~L~~~g~~ 33 (130)
T 3eod_A 5 LVGKQILIVEDEQVFRSLLD---SWFSSLGAT 33 (130)
T ss_dssp TTTCEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred CCCCeEEEEeCCHHHHHHHH---HHHHhCCce
Confidence 45789999998665554444 567777754
No 179
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=28.44 E-value=45 Score=21.26 Aligned_cols=39 Identities=21% Similarity=0.198 Sum_probs=20.1
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHcCCCe-EEEEEEeccC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDRGAYK-IYVLATHGLL 66 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~ga~~-v~~~~~h~~~ 66 (84)
...+|||--.... ......+.+++.+... -.++.||.-.
T Consensus 50 ~~~iliD~G~~~~-~~~~~~~~l~~~~~~~i~~ii~TH~H~ 89 (227)
T 1mqo_A 50 KGLVLVDSSWDDK-LTKELIEMVEKKFQKRVTDVIITHAHA 89 (227)
T ss_dssp TEEEEESCCSSHH-HHHHHHHHHHHHHTSCEEEEECCCCSH
T ss_pred CeEEEEECCCChH-HHHHHHHHHHHhcCCCceEEEeCCCCc
Confidence 4455555443321 1234456666653344 4677899743
No 180
>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative structural genomics; 1.20A {Thermus thermophilus} SCOP: c.94.1.1
Probab=28.36 E-value=23 Score=23.97 Aligned_cols=13 Identities=31% Similarity=0.281 Sum_probs=10.3
Q ss_pred EeccccchHHHHH
Q psy15570 32 VDDMVDDVHSFVA 44 (84)
Q Consensus 32 vDDii~TG~Tl~~ 44 (84)
|=|+++||+|+.+
T Consensus 151 IvDivsTG~TLra 163 (206)
T 1ve4_A 151 VVDVVQTGATLRA 163 (206)
T ss_dssp EEEEESSSHHHHH
T ss_pred EEEeccCHHHHHH
Confidence 3489999999763
No 181
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=28.16 E-value=85 Score=19.82 Aligned_cols=41 Identities=17% Similarity=0.213 Sum_probs=24.8
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHc-CCCeEEEEEEeccCC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDR-GAYKIYVLATHGLLS 67 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~-ga~~v~~~~~h~~~s 67 (84)
++..+|||--.... ......+.|++. |...-.++.||.-..
T Consensus 35 ~~~~iLiD~G~~~~-~~~~~~~~l~~~~g~~i~~vi~TH~H~D 76 (223)
T 1m2x_A 35 DKGVVVIDCPWGED-KFKSFTDEIYKKHGKKVIMNIATHSHDD 76 (223)
T ss_dssp TTEEEEESCCSSGG-GHHHHHHHHHHHHCCCEEEEECSSSSTT
T ss_pred CCEEEEEeCCCChh-HHHHHHHHHHHHhCCCeEEEEeccCCcc
Confidence 35667777665321 223445667776 755557888998654
No 182
>3khs_A Purine nucleoside phosphorylase; alpha-beta structure, mixed beta-barrel, hydrolase; 2.38A {Grouper iridovirus} SCOP: c.56.2.0
Probab=28.04 E-value=1.5e+02 Score=20.56 Aligned_cols=49 Identities=16% Similarity=0.198 Sum_probs=33.0
Q ss_pred eeeeccCCCCEEEEEecccc-----chHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 18 ISVVGDVGGRVAIMVDDMVD-----DVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 18 ~~i~g~v~gk~vlivDDii~-----TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
-.+.|.++|+.|+++--+.- +=+.+...++.++..|++.+....+-+-+
T Consensus 64 ~l~~G~l~G~~Vv~~~GrgH~yeg~~~~~v~~~i~~l~~lGv~~iI~tgaaGgl 117 (285)
T 3khs_A 64 SLIFGSVNGVSCVCMKGRFHLYEGHTAARATFPMRVFKALGVKIVVLTNAAGGL 117 (285)
T ss_dssp EEEEEEETTEEEEEEESCCCGGGTCCHHHHTHHHHHHHHTTCCEEEEEEEEEEC
T ss_pred ceEEEEECCEEEEEEeCCCcccCCCChHHhHHHHHHHHHcCCCEEEEecceecC
Confidence 45678899999999842210 11244456889999999988766655533
No 183
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=28.03 E-value=1.1e+02 Score=18.68 Aligned_cols=38 Identities=24% Similarity=0.273 Sum_probs=24.4
Q ss_pred CCEEEEEecccc-chHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 26 GRVAIMVDDMVD-DVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 26 gk~vlivDDii~-TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
.+.++++||+=. +..+.....+.+.+.......+++++
T Consensus 126 ~~~vlviDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~t~ 164 (250)
T 1njg_A 126 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATT 164 (250)
T ss_dssp SSEEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEEES
T ss_pred CceEEEEECcccccHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 457999999833 34556666777766555555555553
No 184
>2a8y_A 5'-methylthioadenosine phosphorylase (MTAP); alpha/beta, beta sheet, beta barrel, transferase; HET: MTA; 1.45A {Sulfolobus solfataricus} PDB: 3t94_A* 1v4n_A
Probab=28.02 E-value=1.3e+02 Score=20.50 Aligned_cols=48 Identities=17% Similarity=0.253 Sum_probs=32.1
Q ss_pred eeeccCCCCEEEEEe--ccc---cchH-HHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 19 SVVGDVGGRVAIMVD--DMV---DDVH-SFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 19 ~i~g~v~gk~vlivD--Dii---~TG~-Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
.+.|.++|+.|+++- -+- ..+. +.......|+..|++.+....+-|-+
T Consensus 43 ~~~G~~~G~~V~~~~r~G~gh~~~~~~v~~~a~~~~l~~~Gv~~iI~~gaaG~l 96 (270)
T 2a8y_A 43 ITIGKIGNKSVAFLPRHGRGHRIPPHKINYRANIWALKELGVRWVISVSAVGSL 96 (270)
T ss_dssp EEEEEETTEEEEEEETTTGGGCCCGGGCCHHHHHHHHHHTTCCEEEEEEEEEES
T ss_pred EEEEEECCEEEEEEECCCCCCCcCchhhhhHHHHHHHHHcCCCEEEEeeeeecc
Confidence 457889999999986 331 1111 22347789999999998777655544
No 185
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=27.89 E-value=80 Score=18.62 Aligned_cols=21 Identities=19% Similarity=0.336 Sum_probs=16.6
Q ss_pred HHHHHHHHHHcCCCeEEEEEE
Q psy15570 42 FVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 42 l~~~~~~L~~~ga~~v~~~~~ 62 (84)
+.++...+++.|+++++...+
T Consensus 33 lnelmdyikkqgakrvrisit 53 (106)
T 1qys_A 33 LNELMDYIKKQGAKRVRISIT 53 (106)
T ss_dssp HHHHHHHHHHHCCSEEEEEEE
T ss_pred HHHHHHHHHhcCCcEEEEEEE
Confidence 455677889999999987765
No 186
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=27.71 E-value=76 Score=18.14 Aligned_cols=47 Identities=6% Similarity=-0.024 Sum_probs=29.1
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHc------CCCeEEEEEEeccCCCCHHHHhhcCCCCcCC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDR------GAYKIYVLATHGLLSSDAPLLIEESPIDEVP 83 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~------ga~~v~~~~~h~~~s~~a~~~l~~~~i~~i~ 83 (84)
+.++++. .+|..-..++..|++. |...++.+ ..+.....+..-..+|
T Consensus 73 ~~ivv~C---~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l-------~GG~~~W~~~~~~~~p 125 (127)
T 3i2v_A 73 VPIYVIC---KLGNDSQKAVKILQSLSAAQELDPLTVRDV-------VGGLMAWAAKIDGTFP 125 (127)
T ss_dssp EEEEEEC---SSSSHHHHHHHHHHHHHHTTSSSCEEEEEE-------TTHHHHHHHHTCTTSC
T ss_pred CeEEEEc---CCCCcHHHHHHHHHHhhccccCCCceEEEe-------cCCHHHHHHhcCCCCC
Confidence 4888886 4787777888999998 45555432 2455555443333443
No 187
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=27.49 E-value=92 Score=22.01 Aligned_cols=38 Identities=21% Similarity=0.170 Sum_probs=30.6
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
.|.++|.++.++=|. +.+..+.+..+...|+. +.+++.
T Consensus 149 ~g~l~gl~ia~vGD~---~rva~Sl~~~~~~~g~~-v~~~~P 186 (301)
T 2ef0_A 149 FGGLAGLEVAWVGDG---NNVLNSLLEVAPLAGLK-VRVATP 186 (301)
T ss_dssp HSCCTTCEEEEESCC---CHHHHHHHHHHHHHTCE-EEEECC
T ss_pred hCCcCCcEEEEECCC---chhHHHHHHHHHHcCCE-EEEECC
Confidence 467899999999997 78888888999999874 555553
No 188
>3eei_A 5-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN; HET: MTM; 1.78A {Neisseria meningitidis serogroup B} SCOP: c.56.2.1
Probab=27.33 E-value=1.1e+02 Score=19.72 Aligned_cols=45 Identities=18% Similarity=0.282 Sum_probs=27.5
Q ss_pred eeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEec
Q psy15570 20 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG 64 (84)
Q Consensus 20 i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~ 64 (84)
+.|.++|++|+++---+-.-..-..+.+.++..|++.+..+.+-|
T Consensus 37 ~~G~~~g~~v~v~~~G~G~~~aa~~~~~li~~~~~~~iI~~G~aG 81 (233)
T 3eei_A 37 YEGELAGKRMVLALSGIGKVNAAVATAWIIREFAADCVINTGSAG 81 (233)
T ss_dssp EEEEETTEEEEEEECCSSHHHHHHHHHHHHHHHCCSEEEECCEEE
T ss_pred EEEEECCEEEEEEECCCCHHHHHHHHHHHHHhCCCCEEEEEEEee
Confidence 467889999998864433323333333556788999776554434
No 189
>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken structural genomics/proteomi initiative, RSGI, structural genomics; HET: A5P; 1.74A {Thermus thermophilus} SCOP: c.124.1.4 d.58.40.1 PDB: 1uj5_A* 1uj4_A*
Probab=27.32 E-value=54 Score=22.14 Aligned_cols=41 Identities=20% Similarity=0.126 Sum_probs=24.9
Q ss_pred ccchHHHHHHHHHHHHc---CCCe-EEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 36 VDDVHSFVAAAEVLKDR---GAYK-IYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 36 i~TG~Tl~~~~~~L~~~---ga~~-v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
++||+|....++.|.+. +... +.+++ . |....+.+.+.+++
T Consensus 28 LgsGST~~~~~~~L~~~~~~~~l~~itvVT-n---S~~~a~~l~~~gi~ 72 (227)
T 1uj6_A 28 LGTGSTARYAVLELARRLREGELKGVVGVP-T---SRATEELAKREGIP 72 (227)
T ss_dssp ECCSHHHHHHHHHHHHHHHTTSSCSCEEEE-S---SHHHHHHHHHTTCC
T ss_pred EcCCHHHHHHHHHHhhhhhhcCCCCEEEEC-C---cHHHHHHHHhCCCe
Confidence 46999999999999765 2112 55543 2 23455555555553
No 190
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=27.31 E-value=93 Score=21.73 Aligned_cols=55 Identities=13% Similarity=0.091 Sum_probs=27.5
Q ss_pred CCCCCCCcccCCCCCCeee---eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEE
Q psy15570 2 EMDVGVPQHPAKEKPPISV---VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVL 60 (84)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i---~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~ 60 (84)
|-+-|+||+.-..-+.+-+ ...+++.+|+|+ --|+.=..+++.|-..|+..+.++
T Consensus 9 ~~~~~~~y~r~i~L~~~G~~~~q~kL~~~~VlVv----GaGGlGs~va~~La~aGVG~i~lv 66 (292)
T 3h8v_A 9 HHSSGLVPRGSMALKRMGIVSDYEKIRTFAVAIV----GVGGVGSVTAEMLTRCGIGKLLLF 66 (292)
T ss_dssp -----------------------CGGGGCEEEEE----CCSHHHHHHHHHHHHHTCSEEEEE
T ss_pred cccCCCCchHhhcccccChHHHHHHHhCCeEEEE----CcCHHHHHHHHHHHHcCCCEEEEE
Confidence 4466899883333333332 235678899885 678887888899999999876643
No 191
>3uaw_A PNP, purine nucleoside phosphorylase DEOD-type; necleoside phosphorylase I (NP-I) family, transferase; HET: ADN GOL; 1.20A {Bacillus cereus} PDB: 2ac7_A 3uav_A* 3uax_A* 1xe3_A 3uay_A* 3uaz_A* 4d8y_A 4d8x_A 4d8v_A 4d98_A 4d9h_A* 4da0_A* 4da6_A* 4da7_A* 4da8_A* 4dab_A* 4dae_A* 4dan_A* 4dao_A* 4dar_A*
Probab=27.22 E-value=1.4e+02 Score=19.69 Aligned_cols=48 Identities=13% Similarity=0.180 Sum_probs=29.3
Q ss_pred eeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 19 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 19 ~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
.+.|.++|++|+++---+-.-..-..+.+.++..|++.+..+.+-|-+
T Consensus 47 ~~~G~~~g~~v~v~~~G~G~~~aa~~~~~l~~~~g~~~iI~~G~aGgl 94 (235)
T 3uaw_A 47 GFTGTYKGKRVSVQGTGMGVPSISIYVNELIQSYGVKNLIRVGTCGAI 94 (235)
T ss_dssp EEEEEETTEEEEEECCCSSHHHHHHHHHHHHHHHCCCEEEEEEEEEEC
T ss_pred EEEEEECCEEEEEEeCCCCHHHHHHHHHHHHHHCCCCEEEEEeeccCC
Confidence 356788999999984433222222223345566899987766655544
No 192
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=26.99 E-value=1.8e+02 Score=21.12 Aligned_cols=46 Identities=15% Similarity=0.129 Sum_probs=31.2
Q ss_pred CCCCeeee--ccCCCCEEEEEeccccchHHHHHHHHHHHH-cCCCeEEEEE
Q psy15570 14 EKPPISVV--GDVGGRVAIMVDDMVDDVHSFVAAAEVLKD-RGAYKIYVLA 61 (84)
Q Consensus 14 ~~~~~~i~--g~v~gk~vlivDDii~TG~Tl~~~~~~L~~-~ga~~v~~~~ 61 (84)
-...+++. +...| +.++||-.-+...+.++++.|++ ...+++.++.
T Consensus 309 ~~gR~e~v~~~~~~g--~~vi~D~aHnp~~~~a~l~al~~~~~~~~i~~I~ 357 (469)
T 1j6u_A 309 VHRRFSIAFHDPETN--IYVIDDYAHTPDEIRNLLQTAKEVFENEKIVVIF 357 (469)
T ss_dssp CTTSSEEEEEETTTT--EEEEEECCCSHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred CCCCcEEEcccccCC--cEEEEeCCCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 34567766 44333 66788866689999999999996 5445555443
No 193
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=26.82 E-value=72 Score=21.55 Aligned_cols=34 Identities=6% Similarity=-0.124 Sum_probs=23.4
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIY 58 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~ 58 (84)
+++.+++.++--..+.+...++..|+..|.+.|+
T Consensus 91 ~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~ 124 (296)
T 1rhs_A 91 NDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVS 124 (296)
T ss_dssp TTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEE
T ss_pred CCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEE
Confidence 4688999875421122355678899999998776
No 194
>2hvw_A Deoxycytidylate deaminase; 3-layer (alpha-beta)-sandwich, protein-liand complex, hydrolase; HET: DCP DDN; 1.67A {Streptococcus mutans} PDB: 2hvv_A*
Probab=26.67 E-value=28 Score=22.92 Aligned_cols=37 Identities=16% Similarity=0.184 Sum_probs=22.1
Q ss_pred HHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 43 VAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 43 ~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
..++++|.++|.++|.+.+..+- ...+.+.|+++||+
T Consensus 134 ~mCa~aIi~agI~rVVy~~~~~~-~~~~~~~L~~aGIe 170 (184)
T 2hvw_A 134 INCTKALLQAGVKKITYNTAYRI-HPFAIELMTQKEVE 170 (184)
T ss_dssp HHHHHHHHHHTEEEEEEEECCSC-CHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHCCCeEEEEecCCC-CHHHHHHHHHCCCE
Confidence 35677777777777666654321 11236677777764
No 195
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli}
Probab=26.60 E-value=63 Score=21.97 Aligned_cols=33 Identities=12% Similarity=0.079 Sum_probs=24.5
Q ss_pred EEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 28 VAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 28 ~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
-+|-+||-..+-. ..+...|+++|++-.+.+++
T Consensus 68 v~lTfDDg~~~~~--~~~~~~l~~~~~~atfFv~~ 100 (268)
T 3vus_A 68 VVLTFDDGYQSFY--TRVFPILQAFQWPAVWAPVG 100 (268)
T ss_dssp EEEEEEETBHHHH--HHHHHHHHHHTCCEEEEECH
T ss_pred EEEEEeCCchhHH--HHHHHHHHHcCCCEEEEEec
Confidence 5677899875443 45789999999997666654
No 196
>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: c.94.1.1 PDB: 1z7n_E*
Probab=26.59 E-value=20 Score=24.22 Aligned_cols=12 Identities=17% Similarity=0.387 Sum_probs=9.9
Q ss_pred EeccccchHHHH
Q psy15570 32 VDDMVDDVHSFV 43 (84)
Q Consensus 32 vDDii~TG~Tl~ 43 (84)
|=|+++||+|+.
T Consensus 153 IvDivsTG~TLr 164 (208)
T 1z7m_E 153 IVDIVETGNTLS 164 (208)
T ss_dssp EEEEESSSHHHH
T ss_pred EEEEeCChHHHH
Confidence 458999999976
No 197
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=26.52 E-value=1.1e+02 Score=21.73 Aligned_cols=38 Identities=18% Similarity=0.115 Sum_probs=30.9
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
.|.++|.++.++=|. +.+..+.+..+...|+. +.+++.
T Consensus 150 ~g~l~gl~va~vGD~---~rva~Sl~~~~~~~g~~-v~~~~P 187 (315)
T 1pvv_A 150 KGTIKGVKVVYVGDG---NNVAHSLMIAGTKLGAD-VVVATP 187 (315)
T ss_dssp HSCCTTCEEEEESCC---CHHHHHHHHHHHHTTCE-EEEECC
T ss_pred hCCcCCcEEEEECCC---cchHHHHHHHHHHCCCE-EEEECC
Confidence 467899999999997 78888899999999874 665554
No 198
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=26.07 E-value=99 Score=22.34 Aligned_cols=38 Identities=13% Similarity=-0.008 Sum_probs=30.1
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
.|.++|.++.++=|. +.+..+.+..+...|+. +.+++.
T Consensus 174 ~G~l~glkva~vGD~---~nva~Sl~~~~~~~G~~-v~~~~P 211 (340)
T 4ep1_A 174 TNTFKGIKLAYVGDG---NNVCHSLLLASAKVGMH-MTVATP 211 (340)
T ss_dssp HSCCTTCEEEEESCC---CHHHHHHHHHHHHHTCE-EEEECC
T ss_pred hCCCCCCEEEEECCC---chhHHHHHHHHHHcCCE-EEEECC
Confidence 367899999999997 66888888888888974 665554
No 199
>2g6v_A Riboflavin biosynthesis protein RIBD; RIBD APO structure, structural genomics, structural proteomi europe, spine, hydrolase, oxidoreductase; 2.60A {Escherichia coli} PDB: 2obc_A* 2o7p_A*
Probab=25.83 E-value=26 Score=25.58 Aligned_cols=49 Identities=8% Similarity=0.133 Sum_probs=26.7
Q ss_pred EEeccccchHHHHHHHHHHHHcCCCeEEEEEEec--cCCCCHHHHhhcCCCC
Q psy15570 31 MVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHG--LLSSDAPLLIEESPID 80 (84)
Q Consensus 31 ivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~--~~s~~a~~~l~~~~i~ 80 (84)
-+++..-.|.|. .|++++.++|.++|.+.+..+ ...+.+.+.|.+.|++
T Consensus 98 t~ePC~h~G~tp-~C~~ai~~agi~rVv~~~~~~~~~~~g~g~~~l~~~gi~ 148 (402)
T 2g6v_A 98 TLEPCSHHGRTP-PCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGID 148 (402)
T ss_dssp SSCCC--------CCHHHHHHTTCSCEEESSCCCSCSSSTTHHHHHHHTTCC
T ss_pred eCCCcCCCCCch-HHHHHHHHhCCCEEEEEecCCCccccchHHHHHHhCCcE
Confidence 345666667764 456777888888777665433 2234467777777764
No 200
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A*
Probab=25.60 E-value=1.1e+02 Score=18.09 Aligned_cols=49 Identities=14% Similarity=0.346 Sum_probs=33.3
Q ss_pred CEEEEEe----ccccch--HHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 27 RVAIMVD----DMVDDV--HSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 27 k~vlivD----Dii~TG--~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
-+.+|+| +.+||- +.+..+++.++..|.+.+.+ + ..+...+.+...|++
T Consensus 43 ~~~vIlDlsgV~~iDs~g~~~L~~~~~~~~l~G~~~~l~----G-i~p~va~~l~~~G~~ 97 (123)
T 3zxn_A 43 GKGLVIDISALEVVDEFVTRVLIEISRLAELLGLPFVLT----G-IKPAVAITLTEMGLD 97 (123)
T ss_dssp CSEEEEECTTCSSCCHHHHHHHHHHHHHHHHHTCCEEEE----C-CCHHHHHHHHHTTCC
T ss_pred CCEEEEEcCCCCcccHHHHHHHHHHHHHHHHCCCEEEEE----c-CCHHHHHHHHHhCCC
Confidence 3567777 556654 67778889999999874322 2 245667777778775
No 201
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=25.60 E-value=42 Score=22.98 Aligned_cols=38 Identities=16% Similarity=0.060 Sum_probs=27.7
Q ss_pred ccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHH
Q psy15570 36 VDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLL 73 (84)
Q Consensus 36 i~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~ 73 (84)
-++=.-+.+.++.+.+.|+..+.+.-|||...+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~ 188 (295)
T 1ydn_A 151 PVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAA 188 (295)
T ss_dssp ECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHH
Confidence 34445666677777799999999999999887654433
No 202
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1
Probab=25.38 E-value=1.2e+02 Score=22.48 Aligned_cols=39 Identities=36% Similarity=0.547 Sum_probs=23.9
Q ss_pred cCCCCEEEE-------Eec-cccchHHHHHHH---HHHHHcCCCeEEEEEEe
Q psy15570 23 DVGGRVAIM-------VDD-MVDDVHSFVAAA---EVLKDRGAYKIYVLATH 63 (84)
Q Consensus 23 ~v~gk~vli-------vDD-ii~TG~Tl~~~~---~~L~~~ga~~v~~~~~h 63 (84)
+++||+|++ +|| .|+.-..+.+++ +.|.+.|++ | ++.+|
T Consensus 9 dl~gKrVlvRvD~NVPl~~g~Itdd~RI~a~lpTI~~ll~~gak-v-il~SH 58 (398)
T 1vpe_A 9 DLKGKRVIMRVDFNVPVKDGVVQDDTRIRAALPTIKYALEQGAK-V-ILLSH 58 (398)
T ss_dssp CCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCE-E-EEECC
T ss_pred CcCCCEEEEEecCCCcccCCccCChHHHHHHHHHHHHHHHCCCE-E-EEEcc
Confidence 577888877 444 455555566644 566667887 3 34444
No 203
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=25.06 E-value=1.5e+02 Score=20.19 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=27.5
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEE
Q psy15570 23 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 61 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~ 61 (84)
++++++++|+ -+|+.-..++..|.+.|+..+.++.
T Consensus 138 ~l~~~~vlVl----GaGg~g~aia~~L~~~G~~~V~v~n 172 (297)
T 2egg_A 138 TLDGKRILVI----GAGGGARGIYFSLLSTAAERIDMAN 172 (297)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHTTTCSEEEEEC
T ss_pred CCCCCEEEEE----CcHHHHHHHHHHHHHCCCCEEEEEe
Confidence 4578888875 5688888888999999988777654
No 204
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=25.05 E-value=64 Score=20.99 Aligned_cols=28 Identities=21% Similarity=0.266 Sum_probs=17.2
Q ss_pred ccCCCCEEEEEeccccchHH---H-HHHHHHHHHcCCC
Q psy15570 22 GDVGGRVAIMVDDMVDDVHS---F-VAAAEVLKDRGAY 55 (84)
Q Consensus 22 g~v~gk~vlivDDii~TG~T---l-~~~~~~L~~~ga~ 55 (84)
+.++||.++| ||+| + ..+++.|.+.|++
T Consensus 18 ~~l~~k~vlI------TGasg~GIG~~~a~~l~~~G~~ 49 (266)
T 3o38_A 18 GLLKGKVVLV------TAAAGTGIGSTTARRALLEGAD 49 (266)
T ss_dssp STTTTCEEEE------SSCSSSSHHHHHHHHHHHTTCE
T ss_pred cCCCCCEEEE------ECCCCCchHHHHHHHHHHCCCE
Confidence 4567777766 4432 2 4456777777765
No 205
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=25.02 E-value=1.3e+02 Score=22.34 Aligned_cols=39 Identities=26% Similarity=0.430 Sum_probs=24.4
Q ss_pred cCCCCEEEE-------Eec-cccchHHHHHHH---HHHHHcCCCeEEEEEEe
Q psy15570 23 DVGGRVAIM-------VDD-MVDDVHSFVAAA---EVLKDRGAYKIYVLATH 63 (84)
Q Consensus 23 ~v~gk~vli-------vDD-ii~TG~Tl~~~~---~~L~~~ga~~v~~~~~h 63 (84)
+++||+|++ +|| .|+.-..+.+++ +.|.+.|++ +. +.+|
T Consensus 10 dl~gKrVlvRvD~NVP~~~g~Itdd~RI~aalpTI~~ll~~gak-vi-l~SH 59 (387)
T 1zmr_A 10 DLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTIELALKQGAK-VM-VTSH 59 (387)
T ss_dssp CCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCE-EE-EECC
T ss_pred CcCCCEEEEEecCCCcccCCccCChHHHHHHHHHHHHHHHCCCE-EE-EEcc
Confidence 578888887 444 466666666654 566667887 33 3444
No 206
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=25.02 E-value=88 Score=23.27 Aligned_cols=31 Identities=29% Similarity=0.294 Sum_probs=24.7
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYV 59 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~ 59 (84)
+++.++++++ +|..-..++..|++.|. .++.
T Consensus 321 ~~~~ivv~c~---~g~rs~~aa~~L~~~G~-~v~~ 351 (539)
T 1yt8_A 321 RGARLVLVDD---DGVRANMSASWLAQMGW-QVAV 351 (539)
T ss_dssp BTCEEEEECS---SSSHHHHHHHHHHHTTC-EEEE
T ss_pred CCCeEEEEeC---CCCcHHHHHHHHHHcCC-eEEE
Confidence 6789999986 67777778888999998 5553
No 207
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=24.94 E-value=1.6e+02 Score=21.82 Aligned_cols=47 Identities=15% Similarity=0.343 Sum_probs=31.7
Q ss_pred CCCeeeeccCCCCEEEEEeccccchHHHHHHHHHHHHc-CCCe-EEEEEEe
Q psy15570 15 KPPISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDR-GAYK-IYVLATH 63 (84)
Q Consensus 15 ~~~~~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~-ga~~-v~~~~~h 63 (84)
...+++++...| +.++||-..+-..+.++++.|++. +..+ +.++..|
T Consensus 375 ~gR~e~~~~~~g--~~vi~D~ahnp~~~~a~l~~l~~~~~~~r~i~V~g~~ 423 (524)
T 3hn7_A 375 KRRMELIGDVND--ILVFDDFAHHPTAITTTLDGAKKKLADRRLWAIIEPR 423 (524)
T ss_dssp TTSSEEEEEETT--EEEEEECCCSHHHHHHHHHHHHHHHTTSCEEEEEECC
T ss_pred CceEEEEEecCC--cEEEEECCCCHHHHHHHHHHHHhhcCCCCEEEEECCC
Confidence 345665554333 678889899999999999999986 3333 4444444
No 208
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A
Probab=24.86 E-value=1.3e+02 Score=22.33 Aligned_cols=33 Identities=27% Similarity=0.371 Sum_probs=20.5
Q ss_pred cCCCCEEEE-------Eec-cccchHHHHHHH---HHHHHcCCC
Q psy15570 23 DVGGRVAIM-------VDD-MVDDVHSFVAAA---EVLKDRGAY 55 (84)
Q Consensus 23 ~v~gk~vli-------vDD-ii~TG~Tl~~~~---~~L~~~ga~ 55 (84)
+++||+|++ +|| .|+.-..+.+++ +.|.+.|++
T Consensus 8 dl~gKrVlvRvD~NVPl~~g~Itdd~RI~aalpTI~~ll~~gak 51 (390)
T 1v6s_A 8 DPKGKRVLVRVDYNVPVQDGKVQDETRILESLPTLRHLLAGGAS 51 (390)
T ss_dssp CCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCE
T ss_pred CcCCCEEEEEecCCCcccCCccCChHHHHHHHHHHHHHHHCCCE
Confidence 467787776 443 455555566644 556667886
No 209
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A*
Probab=24.85 E-value=1.3e+02 Score=22.36 Aligned_cols=39 Identities=31% Similarity=0.461 Sum_probs=24.2
Q ss_pred cCCCCEEEE-------Eec-cccchHHHHHHH---HHHHHcCCCeEEEEEEe
Q psy15570 23 DVGGRVAIM-------VDD-MVDDVHSFVAAA---EVLKDRGAYKIYVLATH 63 (84)
Q Consensus 23 ~v~gk~vli-------vDD-ii~TG~Tl~~~~---~~L~~~ga~~v~~~~~h 63 (84)
+++||+|++ +|| .|+.-..+.+++ +.|.+.|++ |. +.+|
T Consensus 10 dl~gKrVlvRvD~NVPl~~g~Itdd~RI~aalpTI~~ll~~gak-vi-l~SH 59 (394)
T 1php_A 10 DVRGKRVFCRVDFNVPMEQGAITDDTRIRAALPTIRYLIEHGAK-VI-LASH 59 (394)
T ss_dssp CCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCE-EE-EECC
T ss_pred CcCCCEEEEEecCCCcccCCccCChHHHHHHHHHHHHHHHCCCE-EE-EEec
Confidence 578888887 444 455555666654 566667887 33 4444
No 210
>1p6o_A Cytosine deaminase; hydrolase, dimer, inhibitor bound; 1.14A {Saccharomyces cerevisiae} SCOP: c.97.1.2 PDB: 1ox7_A 1rb7_A 1ysd_A 1ysb_A 2o3k_A 1uaq_A
Probab=24.76 E-value=38 Score=21.61 Aligned_cols=36 Identities=8% Similarity=0.026 Sum_probs=22.8
Q ss_pred HHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 44 AAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 44 ~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
.++.++.+.|.++|...+..+ +.+.+.+.+.+.+++
T Consensus 96 mC~~ai~~agi~rVv~g~~~~-~~g~~~~~l~~~gi~ 131 (161)
T 1p6o_A 96 MCTGAIIMYGIPRCVVGENVN-FKSKGEKYLQTRGHE 131 (161)
T ss_dssp HHHHHHHHHTCCEEEEEESSS-CCCTHHHHHHHTTCE
T ss_pred HHHHHHHHhCCCEEEEEecCC-CCccHHHHHHhcCCE
Confidence 567777788887777666543 333456666666653
No 211
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=24.43 E-value=1e+02 Score=17.19 Aligned_cols=31 Identities=19% Similarity=0.251 Sum_probs=17.0
Q ss_pred EEEEEeccccchHHHHHHHHHHHHcCCCeEE
Q psy15570 28 VAIMVDDMVDDVHSFVAAAEVLKDRGAYKIY 58 (84)
Q Consensus 28 ~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~ 58 (84)
.++|-=|--.+-+++..++..++++|..++.
T Consensus 59 ~V~I~aD~~~~y~~vv~vmd~l~~aG~~~v~ 89 (99)
T 2pfu_A 59 TIFFRADKTVDYETLMKVMDTLHQAGYLKIG 89 (99)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHTCCCCEE
T ss_pred eEEEEcCCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 3444445555555555666666666655544
No 212
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=24.35 E-value=1e+02 Score=22.76 Aligned_cols=37 Identities=11% Similarity=0.168 Sum_probs=28.6
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 23 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
.++||++.|.=| +.-....++.|++.|...+.+.+.+
T Consensus 310 ~l~Gkrv~i~~~----~~~~~~l~~~L~elGm~vv~~~~~~ 346 (458)
T 3pdi_B 310 MLSSARTAIAAD----PDLLLGFDALLRSMGAHTVAAVVPA 346 (458)
T ss_dssp HHTTCEEEEECC----HHHHHHHHHHHHTTTCEEEEEEESS
T ss_pred hcCCCEEEEECC----cHHHHHHHHHHHHCCCEEEEEEECC
Confidence 367999998533 4555677899999999988888754
No 213
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=24.34 E-value=77 Score=23.59 Aligned_cols=32 Identities=22% Similarity=0.144 Sum_probs=25.8
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYV 59 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~ 59 (84)
+++.++++++ +|..-..++..|++.|.+.|+.
T Consensus 62 ~~~~iVvyc~---~g~~s~~a~~~L~~~G~~~V~~ 93 (539)
T 1yt8_A 62 RDTPITVYDD---GEGLAPVAAQRLHDLGYSDVAL 93 (539)
T ss_dssp TTSCEEEECS---SSSHHHHHHHHHHHTTCSSEEE
T ss_pred CCCeEEEEEC---CCChHHHHHHHHHHcCCCceEE
Confidence 5788999985 5556778899999999987773
No 214
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=24.33 E-value=27 Score=24.37 Aligned_cols=17 Identities=24% Similarity=0.268 Sum_probs=12.4
Q ss_pred HHHHHHHHHHcCCCeEE
Q psy15570 42 FVAAAEVLKDRGAYKIY 58 (84)
Q Consensus 42 l~~~~~~L~~~ga~~v~ 58 (84)
...+++.|++.|....+
T Consensus 19 alala~~L~~~g~~V~~ 35 (365)
T 3s2u_A 19 ALACAREFQARGYAVHW 35 (365)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhCCCEEEE
Confidence 45677999999976443
No 215
>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium; 2.09A {Plasmodium falciparum}
Probab=24.22 E-value=24 Score=24.41 Aligned_cols=41 Identities=15% Similarity=0.107 Sum_probs=25.3
Q ss_pred ccchHHHHHHHHHHHHc----CCCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 36 VDDVHSFVAAAEVLKDR----GAYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 36 i~TG~Tl~~~~~~L~~~----ga~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
++||+|....++.|.+. +-+.+.++++ |-+..+.+.+.+++
T Consensus 33 LgsGST~~~~~~~L~~~~~~~~l~~itvVTn----S~~~a~~l~~~gi~ 77 (244)
T 2f8m_A 33 LGTGSTVFYVLERIDNLLKSGKLKDVVCIPT----SIDTELKARKLGIP 77 (244)
T ss_dssp ECCSTTTHHHHHHHHHHHHHTSSCSCEEEES----SHHHHHHHHHHTCC
T ss_pred EcChHHHHHHHHHHhhhhhccCCCCEEEECC----cHHHHHHHHHCCCe
Confidence 57999999999999754 2224555442 33555555554543
No 216
>3o4v_A MTA/SAH nucleosidase; mixed alpha/beta dimer, hydrolase; HET: 4CT; 1.75A {Escherichia coli} SCOP: c.56.2.1 PDB: 1jys_A* 1nc1_A* 1nc3_A* 1y6q_A* 1y6r_A* 1z5p_A* 3df9_A* 1z5n_A* 1z5o_A* 4g89_A*
Probab=24.01 E-value=1.5e+02 Score=19.11 Aligned_cols=47 Identities=17% Similarity=0.209 Sum_probs=29.6
Q ss_pred eeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccC
Q psy15570 20 VVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLL 66 (84)
Q Consensus 20 i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~ 66 (84)
+.|.++|++|+++---+-.-.....+.+.+...|++.+..+.+-|-+
T Consensus 36 ~~G~~~g~~v~v~~~GiG~~~aa~~~~~li~~~~~~~iI~~G~aG~l 82 (234)
T 3o4v_A 36 YTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGL 82 (234)
T ss_dssp EEEEETTEEEEEEECCSSHHHHHHHHHHHHHHHCCSEEEEEEEEEEC
T ss_pred EEEEECCEEEEEEECCCCHHHHHHHHHHHHHhCCCCEEEEEEEEecc
Confidence 46778899998876544333333333356677899987766555544
No 217
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=23.84 E-value=66 Score=23.23 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 40 HSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 40 ~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
-.....++.| +.|.+.|.++.. -|..+.++.|.+.++
T Consensus 254 P~t~~~l~~L-~~G~k~vvVvP~--gFvsD~lETL~eid~ 290 (362)
T 1lbq_A 254 AQTAEIAEFL-GPKVDGLMFIPI--AFTSDHIETLHEIDL 290 (362)
T ss_dssp CBHHHHHHHH-GGGCSCEEEECT--TCSSCCHHHHTCCCC
T ss_pred CCHHHHHHHH-HcCCCeEEEECC--eechhhHhhHHHHHH
Confidence 3456667778 889988877764 477888999887654
No 218
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=23.79 E-value=56 Score=18.67 Aligned_cols=35 Identities=14% Similarity=0.115 Sum_probs=18.9
Q ss_pred EEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 28 VAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 28 ~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
.++|+|--...|.+-...++.+++.....+.+++.
T Consensus 52 dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~ 86 (140)
T 3h5i_A 52 DLILMDIELGEGMDGVQTALAIQQISELPVVFLTA 86 (140)
T ss_dssp SEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEES
T ss_pred CEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEEC
Confidence 68888876643222334445566654334555554
No 219
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=23.66 E-value=95 Score=22.36 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=30.3
Q ss_pred c-cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 22 G-DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 22 g-~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
| .++|.++.++=|. +.+..+.+..+...|+. +.+++.
T Consensus 170 G~~l~glkva~vGD~---~rva~Sl~~~~~~~G~~-v~~~~P 207 (339)
T 4a8t_A 170 GKKLEDCKVVFVGDA---TQVCFSLGLITTKMGMN-FVHFGP 207 (339)
T ss_dssp TCCGGGCEEEEESSC---CHHHHHHHHHHHHTTCE-EEEECC
T ss_pred CCCCCCCEEEEECCC---chhHHHHHHHHHHcCCE-EEEECC
Confidence 5 6889999999998 78888888999999964 555554
No 220
>3u40_A Pnpase, purine nucleoside phosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: ADN; 2.05A {Entamoeba histolytica} SCOP: c.56.2.0 PDB: 3tl6_A*
Probab=23.50 E-value=1.7e+02 Score=19.44 Aligned_cols=49 Identities=14% Similarity=0.075 Sum_probs=30.1
Q ss_pred eeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCC
Q psy15570 19 SVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLS 67 (84)
Q Consensus 19 ~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s 67 (84)
.+.|.++|++|.++---+-.-..-..+.+.++..|++.+..+.+-|-+.
T Consensus 56 ~~tG~~~g~~V~v~~~G~G~~saai~~~eLi~~~gv~~iI~~GtaGgl~ 104 (242)
T 3u40_A 56 GYTGYYKGVKLSVQAHGMGMPSIGIYAYELFNFYGVKRIIRIGSAGAFD 104 (242)
T ss_dssp EEEEEETTEEEEEEECCSSHHHHHHHHHHHHHHSCCCEEEEEEEEEECS
T ss_pred EEEEEECCEEEEEEeCCCCHHHHHHHHHHHHHHcCCCEEEEEEeeeCCC
Confidence 3567889999999864443223323333445669999877666555443
No 221
>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase, northeast structural genomics consortium, IR21, structural genomics, PSI; HET: CIT; 1.90A {Haemophilus influenzae} SCOP: c.124.1.4 d.58.40.1
Probab=23.45 E-value=38 Score=22.85 Aligned_cols=41 Identities=20% Similarity=0.144 Sum_probs=25.1
Q ss_pred ccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 36 VDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 36 i~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
++||+|....++.|.+... .+.+++|. |.+....+.+.+++
T Consensus 26 LdsGST~~~la~~L~~~~~-~itv~VTn---S~~~a~~l~~~gi~ 66 (219)
T 1m0s_A 26 VGSGSTVNCFIEALGTIKD-KIQGAVAA---SKESEELLRKQGIE 66 (219)
T ss_dssp ECCSHHHHHHHHHHHTTGG-GSCEEEES---SHHHHHHHHHTTCC
T ss_pred EcChHHHHHHHHHHhccCC-CEEEEECC---hHHHHHHHHhCCCe
Confidence 4699999999999976521 34552332 23455555555543
No 222
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=23.38 E-value=1.2e+02 Score=18.44 Aligned_cols=40 Identities=23% Similarity=0.242 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHcCCCeEEEEEEeccCCCC--------HHHHhhcCCCCcCC
Q psy15570 40 HSFVAAAEVLKDRGAYKIYVLATHGLLSSD--------APLLIEESPIDEVP 83 (84)
Q Consensus 40 ~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~--------a~~~l~~~~i~~i~ 83 (84)
-.+...++.|++.|+..-+.- +.+.+ ..+.|++.|++.+|
T Consensus 27 ~~~~~~~~~lk~~Gi~V~RyN----L~~~P~aF~~N~~V~~~L~~~G~~~LP 74 (110)
T 3kgk_A 27 VDFSTDVQWLKQSGVQIERFN----LAQQPMSFVQNEKVKAFIEASGAEGLP 74 (110)
T ss_dssp HHHHHHHHHHHHHTCCEEEEE----TTTCTTHHHHSHHHHHHHHHHCGGGCC
T ss_pred HHHHHHHHHHHHCCCeEEEEc----cccChHHHhcCHHHHHHHHHcCcccCC
Confidence 356677889999998744322 33333 35677778888887
No 223
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=23.31 E-value=1.4e+02 Score=22.30 Aligned_cols=39 Identities=18% Similarity=0.325 Sum_probs=24.3
Q ss_pred cCCCCEEEE-------Eec-cccchHHHHHHH---HHHHHcCCCeEEEEEEe
Q psy15570 23 DVGGRVAIM-------VDD-MVDDVHSFVAAA---EVLKDRGAYKIYVLATH 63 (84)
Q Consensus 23 ~v~gk~vli-------vDD-ii~TG~Tl~~~~---~~L~~~ga~~v~~~~~h 63 (84)
+++||+|++ +|| .|+.-..+.+++ +.|.+.|++ +. +.+|
T Consensus 9 dl~gKrVlvRvD~NVPl~~g~Itdd~RI~aalpTI~~ll~~Gak-vi-l~SH 58 (415)
T 16pk_A 9 DLKGKKVLIRVDFNVPVKNGKITNDYRIRSALPTLKKVLTEGGS-CV-LMSH 58 (415)
T ss_dssp CCTTCEEEEEECCCCCEETTEESCCHHHHHHHHHHHHHHHTTCE-EE-EECC
T ss_pred CcCCCEEEEEeccCCcccCCccCchHHHHHHHHHHHHHHHCCCE-EE-EEec
Confidence 578888887 443 455556666654 566667887 33 4444
No 224
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=23.30 E-value=1.3e+02 Score=18.11 Aligned_cols=43 Identities=14% Similarity=0.014 Sum_probs=28.9
Q ss_pred CCCEEEEEeccccch--HHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 25 GGRVAIMVDDMVDDV--HSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 25 ~gk~vlivDDii~TG--~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
+++.++++.+ +| ..-..++..|++.|. .++.+. +++....+.|
T Consensus 71 ~~~~ivvyC~---~g~~~rs~~aa~~L~~~G~-~v~~l~-------GG~~~W~~~g 115 (144)
T 3nhv_A 71 KEKVIITYCW---GPACNGATKAAAKFAQLGF-RVKELI-------GGIEYWRKEN 115 (144)
T ss_dssp TTSEEEEECS---CTTCCHHHHHHHHHHHTTC-EEEEEE-------SHHHHHHHTT
T ss_pred CCCeEEEEEC---CCCccHHHHHHHHHHHCCC-eEEEeC-------CcHHHHHHCC
Confidence 5788888865 56 356678899999998 455432 4555555544
No 225
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=23.16 E-value=38 Score=22.25 Aligned_cols=30 Identities=10% Similarity=0.129 Sum_probs=21.4
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHHcCCC
Q psy15570 23 DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAY 55 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~ 55 (84)
.++|++|+++||=-.....+ .+.|..+|..
T Consensus 8 ~l~~~~vlvv~d~~~~~~~l---~~~L~~~g~~ 37 (254)
T 2ayx_A 8 GLSGKRCWLAVRNASLCQFL---ETSLQRSGIV 37 (254)
T ss_dssp TTTTEEEEEECCCHHHHHHH---HHHHTTTTEE
T ss_pred ccCCCEEEEEcCCHHHHHHH---HHHHHHCCCE
Confidence 47899999999965554444 4577777754
No 226
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=22.96 E-value=1e+02 Score=21.33 Aligned_cols=35 Identities=14% Similarity=-0.106 Sum_probs=24.1
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEE
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIY 58 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~ 58 (84)
++||.+.++----..|.++....+.|.+.|+..+.
T Consensus 334 l~~k~~~~f~t~g~~~~a~~~l~~~l~~~G~~~~~ 368 (402)
T 1e5d_A 334 PQNKIGGAFGSFGWSGESTKVLAEWLTGMGFDMPA 368 (402)
T ss_dssp CCSCEEEEEEEESSSCHHHHHHHHHHHHTTCBCCS
T ss_pred cCCCEEEEEEcCCCccHHHHHHHHHHHHCCCEEec
Confidence 56777777765444567777777888888877653
No 227
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=22.92 E-value=1.2e+02 Score=17.40 Aligned_cols=42 Identities=14% Similarity=-0.009 Sum_probs=25.0
Q ss_pred cCCCCEEEEEecccc-chHHHHHHHHHHHHcCCCeEEEEEEec
Q psy15570 23 DVGGRVAIMVDDMVD-DVHSFVAAAEVLKDRGAYKIYVLATHG 64 (84)
Q Consensus 23 ~v~gk~vlivDDii~-TG~Tl~~~~~~L~~~ga~~v~~~~~h~ 64 (84)
.++||++.++=---. .|.++....+.|++.|+..+..+.+.+
T Consensus 77 ~l~~k~~~~~~t~g~~~~~~~~~l~~~l~~~g~~~~~~~~~~g 119 (137)
T 2fz5_A 77 KLKGKKVGLFGSYGWGSGEWMDAWKQRTEDTGATVIGTAIVNE 119 (137)
T ss_dssp GCSSCEEEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEEEEES
T ss_pred hcCCCEEEEEEecCCCCchHHHHHHHHHHHCCCEEcCcEEEee
Confidence 456777766653222 256677777777777777664444433
No 228
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=22.77 E-value=1.3e+02 Score=19.03 Aligned_cols=39 Identities=15% Similarity=0.106 Sum_probs=22.4
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHcCCCeE-EEEEEeccC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDRGAYKI-YVLATHGLL 66 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~ga~~v-~~~~~h~~~ 66 (84)
+..+|||--... .......+.+++.+...+ .++.||.-.
T Consensus 46 ~~~iLiD~G~~~-~~~~~~~~~l~~~~~~~i~~ii~TH~H~ 85 (232)
T 1a7t_A 46 HQAALLDTPIND-AQTEMLVNWVTDSLHAKVTTFIPNHWHG 85 (232)
T ss_dssp TEEEEESCCSSH-HHHHHHHHHHHHHHCCEEEEEECSSSSH
T ss_pred CEEEEEeCCCCH-HHHHHHHHHHHHhcCCCeEEEEeCCCCc
Confidence 455666644431 233456677777744444 677788754
No 229
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, histidine, magnesi transferase; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=22.76 E-value=35 Score=24.23 Aligned_cols=13 Identities=8% Similarity=0.189 Sum_probs=10.4
Q ss_pred EeccccchHHHHH
Q psy15570 32 VDDMVDDVHSFVA 44 (84)
Q Consensus 32 vDDii~TG~Tl~~ 44 (84)
|=|+++||+|+.+
T Consensus 158 IvDivsTG~TLra 170 (289)
T 2vd3_A 158 ITDLSSTGTTLRM 170 (289)
T ss_dssp EEEEESSTHHHHH
T ss_pred EEEEeCChHHHHH
Confidence 4489999999763
No 230
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=22.44 E-value=2e+02 Score=19.86 Aligned_cols=48 Identities=15% Similarity=-0.027 Sum_probs=29.0
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCCC
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPID 80 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i~ 80 (84)
.|++|+|+ ..|+.=..+++.++..|+..|.+... ++.-.+.+.+.|.+
T Consensus 192 ~g~~VlV~----GaG~vG~~a~qla~~~Ga~~Vi~~~~----~~~~~~~~~~lGa~ 239 (374)
T 1cdo_A 192 PGSTCAVF----GLGAVGLAAVMGCHSAGAKRIIAVDL----NPDKFEKAKVFGAT 239 (374)
T ss_dssp TTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEEECS----CGGGHHHHHHTTCC
T ss_pred CCCEEEEE----CCCHHHHHHHHHHHHcCCCEEEEEcC----CHHHHHHHHHhCCc
Confidence 47888886 23555556678888899876665442 33444445544543
No 231
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=22.38 E-value=1e+02 Score=22.37 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=30.4
Q ss_pred c-cCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 22 G-DVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 22 g-~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
| .++|.++.++=|. +.+..+.+..+...|+. +.+++.
T Consensus 148 G~~l~glkva~vGD~---~rva~Sl~~~~~~~G~~-v~~~~P 185 (355)
T 4a8p_A 148 GKKLEDCKVVFVGDA---TQVCFSLGLITTKMGMN-FVHFGP 185 (355)
T ss_dssp TCCGGGCEEEEESCC---CHHHHHHHHHHHHTTCE-EEEECC
T ss_pred CCCCCCCEEEEECCC---chhHHHHHHHHHHcCCE-EEEECC
Confidence 5 6889999999998 88888889999999974 555553
No 232
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=22.37 E-value=1.1e+02 Score=16.91 Aligned_cols=26 Identities=23% Similarity=0.189 Sum_probs=15.8
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGA 54 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga 54 (84)
+.+++|+||=-.....+. +.|++.|.
T Consensus 6 ~~~ilivdd~~~~~~~l~---~~L~~~g~ 31 (132)
T 3lte_A 6 SKRILVVDDDQAMAAAIE---RVLKRDHW 31 (132)
T ss_dssp -CEEEEECSCHHHHHHHH---HHHHHTTC
T ss_pred CccEEEEECCHHHHHHHH---HHHHHCCc
Confidence 568899998655544444 45556665
No 233
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=22.36 E-value=1.8e+02 Score=19.82 Aligned_cols=40 Identities=25% Similarity=0.235 Sum_probs=25.6
Q ss_pred CCCEEEEEecccc-chHHHHHHHHHHHHcCCCeEEEEEEec
Q psy15570 25 GGRVAIMVDDMVD-DVHSFVAAAEVLKDRGAYKIYVLATHG 64 (84)
Q Consensus 25 ~gk~vlivDDii~-TG~Tl~~~~~~L~~~ga~~v~~~~~h~ 64 (84)
.+++|+|||+.=. |........+.|.+-....+++++++.
T Consensus 107 ~~~kvviIdead~l~~~a~naLLk~lEep~~~~~~Il~t~~ 147 (334)
T 1a5t_A 107 GGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATRE 147 (334)
T ss_dssp SSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEEESC
T ss_pred CCcEEEEECchhhcCHHHHHHHHHHhcCCCCCeEEEEEeCC
Confidence 3579999997533 344556667777765555666666543
No 234
>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} SCOP: c.94.1.1 d.58.5.3 PDB: 1q1k_A*
Probab=22.18 E-value=34 Score=24.39 Aligned_cols=13 Identities=23% Similarity=0.289 Sum_probs=10.5
Q ss_pred EeccccchHHHHH
Q psy15570 32 VDDMVDDVHSFVA 44 (84)
Q Consensus 32 vDDii~TG~Tl~~ 44 (84)
|=|+++||+|+.+
T Consensus 167 IvDivsTG~TLra 179 (299)
T 1h3d_A 167 ICDLVSTGATLEA 179 (299)
T ss_dssp EEEEESSCHHHHH
T ss_pred EEecccCHHHHHH
Confidence 4489999999874
No 235
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=21.88 E-value=54 Score=21.98 Aligned_cols=21 Identities=14% Similarity=0.170 Sum_probs=12.9
Q ss_pred HHHHHHHHHHcCCCeEEEEEE
Q psy15570 42 FVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 42 l~~~~~~L~~~ga~~v~~~~~ 62 (84)
...+++.++..|++++-++++
T Consensus 105 ~~A~~~al~~~g~~rvglltp 125 (240)
T 3ixl_A 105 STAVLNGLRALGVRRVALATA 125 (240)
T ss_dssp HHHHHHHHHHTTCSEEEEEES
T ss_pred HHHHHHHHHHhCCCEEEEEeC
Confidence 344455666667777766664
No 236
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=21.85 E-value=1.3e+02 Score=22.53 Aligned_cols=36 Identities=14% Similarity=0.180 Sum_probs=27.9
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
+.||+++|.= .......+++.|.+.|...+.+.+.+
T Consensus 358 l~Gkrv~i~g----d~~~~~~la~~L~ElGm~vv~v~~~~ 393 (519)
T 1qgu_B 358 LHGKKFGLYG----DPDFVMGLTRFLLELGCEPTVILSHN 393 (519)
T ss_dssp HTTCEEEEES----CHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred cCCCEEEEEC----CchHHHHHHHHHHHCCCEEEEEEeCC
Confidence 5799999874 34556667889999999988887753
No 237
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=21.83 E-value=1e+02 Score=20.24 Aligned_cols=27 Identities=19% Similarity=0.262 Sum_probs=15.0
Q ss_pred cCCCCEEEEEeccccchHH----H-HHHHHHHHHcCCC
Q psy15570 23 DVGGRVAIMVDDMVDDVHS----F-VAAAEVLKDRGAY 55 (84)
Q Consensus 23 ~v~gk~vlivDDii~TG~T----l-~~~~~~L~~~ga~ 55 (84)
+++||.++| ||.+ + ...++.|.+.|++
T Consensus 3 ~l~gK~alV------TGaa~~~GIG~aiA~~la~~Ga~ 34 (256)
T 4fs3_A 3 NLENKTYVI------MGIANKRSIAFGVAKVLDQLGAK 34 (256)
T ss_dssp CCTTCEEEE------ECCCSTTCHHHHHHHHHHHTTCE
T ss_pred CCCCCEEEE------ECCCCCchHHHHHHHHHHHCCCE
Confidence 356666665 4411 2 3455666677765
No 238
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=21.78 E-value=43 Score=22.65 Aligned_cols=26 Identities=15% Similarity=0.201 Sum_probs=18.8
Q ss_pred ccchHHHHHHHHHHHHc-CCCeEEEEE
Q psy15570 36 VDDVHSFVAAAEVLKDR-GAYKIYVLA 61 (84)
Q Consensus 36 i~TG~Tl~~~~~~L~~~-ga~~v~~~~ 61 (84)
++||+|+...++.|.+. ....+.++-
T Consensus 62 la~G~T~~~~~~~l~~~~~~~~v~~v~ 88 (255)
T 2okg_A 62 VTGGTTIEAVAEMMTPDSKNRELLFVP 88 (255)
T ss_dssp ECCSHHHHHHHHHCCCCTTCCEEEEEE
T ss_pred ECCcHHHHHHHHhhccccCCCCCEEEE
Confidence 58999999999988764 445555444
No 239
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=21.68 E-value=80 Score=22.00 Aligned_cols=28 Identities=11% Similarity=0.067 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHcCCCeEEEEEEeccCCC
Q psy15570 41 SFVAAAEVLKDRGAYKIYVLATHGLLSS 68 (84)
Q Consensus 41 Tl~~~~~~L~~~ga~~v~~~~~h~~~s~ 68 (84)
++..+++.|++.|++++.++..++.+|.
T Consensus 92 ~i~~~l~~l~~~G~~~ivvlPl~pq~s~ 119 (310)
T 2h1v_A 92 FIEDAVAEMHKDGITEAVSIVLAPHFST 119 (310)
T ss_dssp BHHHHHHHHHHTTCCEEEEEESSSSCCT
T ss_pred CHHHHHHHHHhcCCCEEEEEECccchhh
Confidence 5677888888899998888888776654
No 240
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=21.68 E-value=37 Score=24.24 Aligned_cols=47 Identities=19% Similarity=0.138 Sum_probs=35.8
Q ss_pred eccccchHHHHHHHHHHHHcCCCeEEEEEEeccCCCCHHHHhhcCCC
Q psy15570 33 DDMVDDVHSFVAAAEVLKDRGAYKIYVLATHGLLSSDAPLLIEESPI 79 (84)
Q Consensus 33 DDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h~~~s~~a~~~l~~~~i 79 (84)
=|-.+-|..+-...+.|++.|+.-+.=..|++++.+.-++.|++.++
T Consensus 101 v~~~DP~~~~g~~Le~lk~~Gf~Gv~N~ptvglidG~fr~~LEE~gm 147 (286)
T 2p10_A 101 VNGTDPFMVMSTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGM 147 (286)
T ss_dssp ECTTCTTCCHHHHHHHHHHHTCCEEEECSCGGGCCHHHHHHHHHTTC
T ss_pred ECCcCCCcCHHHHHHHHHHhCCceEEECCCcccccchhhhhHhhcCC
Confidence 34455555566666899999999886667888888888888888764
No 241
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=21.43 E-value=1.2e+02 Score=19.89 Aligned_cols=45 Identities=9% Similarity=0.008 Sum_probs=28.5
Q ss_pred ccchHHHHHHHHHHHHc-----CCCeEEEEEEeccCC----CCHHHHhhcCCCC
Q psy15570 36 VDDVHSFVAAAEVLKDR-----GAYKIYVLATHGLLS----SDAPLLIEESPID 80 (84)
Q Consensus 36 i~TG~Tl~~~~~~L~~~-----ga~~v~~~~~h~~~s----~~a~~~l~~~~i~ 80 (84)
+.|-.--..|++++.++ |.+.|...+.-.-+. ..+.+.|.++||+
T Consensus 88 YvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~d~~~~~p~~~~g~~~L~~aGI~ 141 (190)
T 2nyt_A 88 YVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQAALKKLKEAGCK 141 (190)
T ss_pred EEEcChHHHHHHHHHHhhhhcCCccEEEEEeecCCcCChHHHHHHHHHHHCCCE
Confidence 44555555678888888 888777655322111 1467788888874
No 242
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=21.43 E-value=82 Score=21.96 Aligned_cols=38 Identities=8% Similarity=0.009 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHHc-CCCeEEEEEEeccCCCCHHHHhhcCC
Q psy15570 39 VHSFVAAAEVLKDR-GAYKIYVLATHGLLSSDAPLLIEESP 78 (84)
Q Consensus 39 G~Tl~~~~~~L~~~-ga~~v~~~~~h~~~s~~a~~~l~~~~ 78 (84)
+-++..+++.|.+. |++.|.++.. -|..+.++.+.+.+
T Consensus 232 ~P~~~~~l~~l~~~~G~k~v~V~P~--~F~sD~lEtl~ei~ 270 (310)
T 2h1v_A 232 GPDVQDLTRDLFEQKGYQAFVYVPV--GFVADHLEVLYDND 270 (310)
T ss_dssp SCBHHHHHHHHHHHHCCSEEEEECT--TCCSSCHHHHTTTT
T ss_pred CCCHHHHHHHHHHHcCCceEEEECC--cccccceeeHHHHH
Confidence 44557777888888 9998877763 36667788876643
No 243
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=21.15 E-value=37 Score=24.34 Aligned_cols=13 Identities=15% Similarity=0.327 Sum_probs=10.5
Q ss_pred EeccccchHHHHH
Q psy15570 32 VDDMVDDVHSFVA 44 (84)
Q Consensus 32 vDDii~TG~Tl~~ 44 (84)
|=|+++||+|+.+
T Consensus 172 IvDiVsTG~TLra 184 (304)
T 1nh8_A 172 IADVVGSGRTLSQ 184 (304)
T ss_dssp EEEEESSSHHHHH
T ss_pred EEEEeCChHHHHH
Confidence 4489999999763
No 244
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=21.11 E-value=1.3e+02 Score=18.79 Aligned_cols=39 Identities=8% Similarity=-0.010 Sum_probs=21.8
Q ss_pred CEEEEEeccccchHHHHHHHHHHHHcCCCeE-EEEEEeccC
Q psy15570 27 RVAIMVDDMVDDVHSFVAAAEVLKDRGAYKI-YVLATHGLL 66 (84)
Q Consensus 27 k~vlivDDii~TG~Tl~~~~~~L~~~ga~~v-~~~~~h~~~ 66 (84)
+.++|||--.+. .......+.+++.+...+ .++.||.-+
T Consensus 35 ~~~iLiD~G~~~-~~~~~~~~~l~~~~~~~i~~ii~TH~H~ 74 (233)
T 3q6v_A 35 DGITIIGATWTP-ETAETLYKEIRKVSPLPINEVINTNYHT 74 (233)
T ss_dssp SCEEEESCCSSH-HHHHHHHHHHHHHCCCCEEEEECSSSSH
T ss_pred CeEEEEECCCCH-HHHHHHHHHHHHhcCCCcEEEEECCCCh
Confidence 445666644322 123445566766655555 577798854
No 245
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=21.08 E-value=1.4e+02 Score=21.07 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=30.0
Q ss_pred eccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 21 VGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 21 ~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
.|.++|.++.++=|. +.+..+.+..+...|+. +.+++.
T Consensus 149 ~g~l~glkva~vGD~---~~va~Sl~~~~~~~G~~-v~~~~P 186 (309)
T 4f2g_A 149 RGPIRGKTVAWVGDA---NNMLYTWIQAARILDFK-LQLSTP 186 (309)
T ss_dssp HSCCTTCEEEEESCC---CHHHHHHHHHHHHHTCE-EEEECC
T ss_pred hCCCCCCEEEEECCC---cchHHHHHHHHHHcCCE-EEEECC
Confidence 467899999999995 67888888889999964 555553
No 246
>3exc_X Uncharacterized protein; ferredoxin fold, double split beta-alpha-beta fold, dimer, C aspartate, RNA'ASE, hydrolase; 2.25A {Sulfolobus solfataricus} SCOP: d.58.58.0
Probab=20.86 E-value=1.3e+02 Score=17.38 Aligned_cols=32 Identities=31% Similarity=0.310 Sum_probs=23.0
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKI 57 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v 57 (84)
++..++++=|+-+. .....+++.|+++|...+
T Consensus 2 ~~M~vlV~YDI~~~-krr~kv~k~l~~yGl~rv 33 (91)
T 3exc_X 2 QGMKLLVVYDVSDD-SKRNKLANNLKKLGLERI 33 (91)
T ss_dssp --CEEEEEEECCSH-HHHHHHHHHHHHTTCEEE
T ss_pred CceEEEEEEeCCCc-hHHHHHHHHHHHhCCccc
Confidence 34568888888765 456889999999995433
No 247
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=20.83 E-value=1.8e+02 Score=20.05 Aligned_cols=40 Identities=5% Similarity=0.115 Sum_probs=30.8
Q ss_pred eeeeccCCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 18 ISVVGDVGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 18 ~~i~g~v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
+.+--+++|++|+|+ -.|..-...++.|.+.|++ |.+++.
T Consensus 5 lpl~~~l~~k~VLVV----GgG~va~rka~~Ll~~Ga~-VtViap 44 (274)
T 1kyq_A 5 LQLAHQLKDKRILLI----GGGEVGLTRLYKLMPTGCK-LTLVSP 44 (274)
T ss_dssp EEEEECCTTCEEEEE----EESHHHHHHHHHHGGGTCE-EEEEEE
T ss_pred eeEEEEcCCCEEEEE----CCcHHHHHHHHHHHhCCCE-EEEEcC
Confidence 334447899999985 6888888999999999987 555553
No 248
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=20.82 E-value=1.5e+02 Score=17.81 Aligned_cols=38 Identities=11% Similarity=0.047 Sum_probs=23.4
Q ss_pred CCCEEEEEeccccc-hHHHHHHHHHHHHcCCCeEEEEEE
Q psy15570 25 GGRVAIMVDDMVDD-VHSFVAAAEVLKDRGAYKIYVLAT 62 (84)
Q Consensus 25 ~gk~vlivDDii~T-G~Tl~~~~~~L~~~ga~~v~~~~~ 62 (84)
.++.++++||+=.- ........+.+.+.......++++
T Consensus 101 ~~~~vliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~ 139 (226)
T 2chg_A 101 APFKIIFLDEADALTADAQAALRRTMEMYSKSCRFILSC 139 (226)
T ss_dssp CSCEEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEE
T ss_pred cCceEEEEeChhhcCHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 35789999997443 344555666666655555555554
No 249
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=20.78 E-value=1e+02 Score=21.22 Aligned_cols=37 Identities=8% Similarity=-0.025 Sum_probs=27.4
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCC--CeEEEE
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGA--YKIYVL 60 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga--~~v~~~ 60 (84)
+....+++-+---+|+.++..+.+.+++.|. +++.++
T Consensus 112 Vp~~~IllE~~S~nT~ENa~~s~~ll~~~g~~~~~iiLV 150 (266)
T 3ca8_A 112 IPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVV 150 (266)
T ss_dssp CCGGGEEEECCCCSHHHHHHHHHHHHHTCSSCCSCEEEE
T ss_pred CCHHHEEeCCCCccHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 4445666666677889999999999999986 555433
No 250
>2am1_A SP protein, UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-A alanine ligase, MURF protein; HET: 1LG; 2.50A {Streptococcus pneumoniae} PDB: 2am2_A*
Probab=20.62 E-value=2e+02 Score=20.68 Aligned_cols=37 Identities=11% Similarity=0.062 Sum_probs=25.5
Q ss_pred CCCeeeeccCCCCEEEEEec-cccchHHHHHHHHHHHHcC
Q psy15570 15 KPPISVVGDVGGRVAIMVDD-MVDDVHSFVAAAEVLKDRG 53 (84)
Q Consensus 15 ~~~~~i~g~v~gk~vlivDD-ii~TG~Tl~~~~~~L~~~g 53 (84)
...+++.....| +.++|| -..+=.++..+++.+++..
T Consensus 306 ~gR~e~~~~~~~--~~iiDDsyahnp~s~~~~l~~l~~~~ 343 (454)
T 2am1_A 306 RNRTEWKKAANG--ADILSDVYNANPTAMKLILETFSAIP 343 (454)
T ss_dssp CCCSCEECCTTT--CEEEEECSCCSHHHHHHHHHHHTTSC
T ss_pred cCCeeEEECCCC--eEEEEeCCCCCHHHHHHHHHHHHhcc
Confidence 345665543223 558999 5567888999999998764
No 251
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=20.21 E-value=1.4e+02 Score=17.28 Aligned_cols=26 Identities=15% Similarity=0.345 Sum_probs=16.7
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHHcCC
Q psy15570 26 GRVAIMVDDMVDDVHSFVAAAEVLKDRGA 54 (84)
Q Consensus 26 gk~vlivDDii~TG~Tl~~~~~~L~~~ga 54 (84)
..+++|+||=-.....+. +.|++.|.
T Consensus 7 ~~~ILivdd~~~~~~~l~---~~L~~~g~ 32 (154)
T 3gt7_A 7 AGEILIVEDSPTQAEHLK---HILEETGY 32 (154)
T ss_dssp CCEEEEECSCHHHHHHHH---HHHHTTTC
T ss_pred CCcEEEEeCCHHHHHHHH---HHHHHCCC
Confidence 568999998655444443 45666664
No 252
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=20.19 E-value=1.6e+02 Score=21.47 Aligned_cols=36 Identities=19% Similarity=0.396 Sum_probs=28.2
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEEEe
Q psy15570 24 VGGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLATH 63 (84)
Q Consensus 24 v~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~~h 63 (84)
+.||+++|.=| +.....+++.|++.|...+.+.+.+
T Consensus 310 l~gkrv~i~~~----~~~~~~l~~~L~elG~~vv~v~~~~ 345 (458)
T 1mio_B 310 LQGKKVALLGD----PDEIIALSKFIIELGAIPKYVVTGT 345 (458)
T ss_dssp HTTCEEEEEEC----HHHHHHHHHHHHTTTCEEEEEEESS
T ss_pred cCCCEEEEEcC----chHHHHHHHHHHHCCCEEEEEEeCC
Confidence 57999998755 4666677789999999988877753
No 253
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=20.16 E-value=1.2e+02 Score=18.48 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=22.0
Q ss_pred CCCEEEEEeccccc------hHHHHHHHHHHHHcCCC
Q psy15570 25 GGRVAIMVDDMVDD------VHSFVAAAEVLKDRGAY 55 (84)
Q Consensus 25 ~gk~vlivDDii~T------G~Tl~~~~~~L~~~ga~ 55 (84)
+++.+++.+.--.. +.+...+++.|++.|..
T Consensus 92 ~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~~ 128 (158)
T 3tg1_B 92 FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGKE 128 (158)
T ss_dssp TTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTCC
T ss_pred CCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCCc
Confidence 37889998873321 14667788999999983
No 254
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=20.04 E-value=2.1e+02 Score=19.28 Aligned_cols=33 Identities=12% Similarity=0.086 Sum_probs=24.6
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCCeEEEEE
Q psy15570 25 GGRVAIMVDDMVDDVHSFVAAAEVLKDRGAYKIYVLA 61 (84)
Q Consensus 25 ~gk~vlivDDii~TG~Tl~~~~~~L~~~ga~~v~~~~ 61 (84)
.|++|++. -.|+.-..++..++..|+..+.++.
T Consensus 160 ~g~~VlV~----GaG~vG~~aiq~ak~~G~~~vi~~~ 192 (346)
T 4a2c_A 160 ENKNVIII----GAGTIGLLAIQCAVALGAKSVTAID 192 (346)
T ss_dssp TTSEEEEE----CCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCEEEEE----CCCCcchHHHHHHHHcCCcEEEEEe
Confidence 57888876 3466666778899999999776655
No 255
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=20.01 E-value=12 Score=28.67 Aligned_cols=16 Identities=19% Similarity=0.306 Sum_probs=12.8
Q ss_pred EEEeccccchHHHHHH
Q psy15570 30 IMVDDMVDDVHSFVAA 45 (84)
Q Consensus 30 livDDii~TG~Tl~~~ 45 (84)
.++||+.|+++|+.++
T Consensus 293 tviDD~fD~~gt~eEl 308 (543)
T 2ong_A 293 TVIDDIYDVYGTLEEL 308 (543)
T ss_dssp HHHHHHHHSSSCHHHH
T ss_pred HHHHHHhccCCCHHHH
Confidence 3589999998887764
Done!