Query psy15572
Match_columns 144
No_of_seqs 147 out of 1368
Neff 5.6
Searched_HMMs 29240
Date Sat Aug 17 00:44:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15572.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15572hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2je8_A Beta-mannosidase; glyco 99.9 4.7E-24 1.6E-28 196.4 12.0 110 3-142 24-133 (848)
2 2vzs_A CSXA, EXO-beta-D-glucos 99.8 4.5E-21 1.6E-25 179.7 11.6 107 3-142 78-188 (1032)
3 1yq2_A Beta-galactosidase; gly 99.6 2.3E-15 7.8E-20 141.6 9.4 105 4-142 75-189 (1024)
4 3bga_A Beta-galactosidase; NYS 99.6 3.8E-15 1.3E-19 140.0 8.8 103 4-142 78-194 (1010)
5 3cmg_A Putative beta-galactosi 99.6 6.1E-15 2.1E-19 132.3 8.9 95 4-142 23-118 (667)
6 1jz7_A Lactase, beta-galactosi 99.5 1.1E-14 3.7E-19 137.1 8.1 101 7-142 82-188 (1023)
7 3gm8_A Glycoside hydrolase fam 99.5 4.9E-14 1.7E-18 129.7 10.0 60 81-142 75-134 (801)
8 3fn9_A Putative beta-galactosi 99.4 2E-13 6.9E-18 123.8 9.1 60 81-142 69-129 (692)
9 3lpf_A Beta-glucuronidase; alp 99.4 5.6E-13 1.9E-17 118.7 9.1 65 76-142 71-136 (605)
10 3hn3_A Beta-G1, beta-glucuroni 99.4 7.7E-13 2.6E-17 117.4 7.0 66 76-142 81-152 (613)
11 3oba_A Beta-galactosidase; TIM 99.4 4.7E-13 1.6E-17 126.1 5.8 61 81-142 121-181 (1032)
12 1tg7_A Beta-galactosidase; TIM 97.4 0.00024 8.2E-09 67.0 7.0 65 69-140 681-758 (971)
13 2okx_A Rhamnosidase B; alpha b 97.4 0.00054 1.8E-08 63.7 8.8 61 76-142 26-94 (956)
14 3og2_A Beta-galactosidase; TIM 97.0 0.0013 4.3E-08 62.3 7.5 61 76-141 715-781 (1003)
15 1tg7_A Beta-galactosidase; TIM 96.4 0.0063 2.1E-07 57.4 7.6 65 76-142 855-928 (971)
16 3d3a_A Beta-galactosidase; pro 90.6 0.45 1.6E-05 42.7 6.3 60 63-128 373-433 (612)
17 3cih_A Putative alpha-rhamnosi 90.2 0.26 9E-06 44.4 4.5 52 76-144 61-112 (739)
18 3d3a_A Beta-galactosidase; pro 77.3 7.6 0.00026 34.7 7.8 60 75-142 510-573 (612)
19 4e8d_A Glycosyl hydrolase, fam 71.3 4.8 0.00016 36.1 4.9 49 66-120 377-426 (595)
20 3thd_A Beta-galactosidase; TIM 63.1 5.3 0.00018 36.3 3.5 59 66-128 384-443 (654)
21 3og2_A Beta-galactosidase; TIM 62.9 16 0.00056 34.7 6.9 68 75-142 886-960 (1003)
22 4b0m_A F1 capsule-anchoring pr 50.4 11 0.00036 27.1 2.7 20 101-120 31-50 (136)
23 4e8d_A Glycosyl hydrolase, fam 47.5 59 0.002 29.1 7.6 68 68-142 501-571 (595)
24 4hg6_B Cellulose synthase subu 46.9 17 0.00059 33.3 4.1 41 102-142 93-137 (707)
25 3bwu_D FIMD, outer membrane us 45.8 14 0.00048 25.6 2.7 17 101-117 32-48 (125)
26 3flp_A SAP-like pentraxin; phy 44.8 21 0.00071 27.0 3.8 29 91-119 100-128 (217)
27 2v73_A CBM40, putative EXO-alp 44.8 41 0.0014 25.8 5.4 26 91-117 108-133 (191)
28 3thd_A Beta-galactosidase; TIM 42.4 54 0.0019 29.7 6.6 67 73-143 526-599 (654)
29 2wul_A Glutaredoxin related pr 39.2 11 0.00039 26.5 1.4 21 98-118 72-92 (118)
30 3but_A Uncharacterized protein 37.4 39 0.0013 24.2 4.1 25 89-115 28-52 (136)
31 3uep_A YSCQ-C, type III secret 37.3 40 0.0014 22.7 3.9 49 89-138 42-92 (96)
32 2sli_A Intramolecular trans-si 31.5 74 0.0025 28.5 5.7 29 91-119 111-139 (679)
33 1o9y_A HRCQ2; secretory protei 28.3 77 0.0026 20.6 4.0 38 94-131 41-81 (84)
34 3i2d_A E3 SUMO-protein ligase 28.0 45 0.0015 28.2 3.4 30 103-134 142-178 (371)
35 4dqa_A Uncharacterized protein 24.7 68 0.0023 26.2 3.9 28 91-118 224-251 (355)
36 3kqr_A Serum amyloid P-compone 24.3 61 0.0021 24.2 3.3 25 91-115 92-116 (204)
37 2jkb_A Sialidase B; intramolec 24.3 1.2E+02 0.0041 27.2 5.7 28 92-119 134-161 (686)
38 3pe9_A Fibronectin(III)-like m 23.8 84 0.0029 21.1 3.7 26 103-130 34-59 (98)
39 3ipz_A Monothiol glutaredoxin- 23.2 32 0.0011 22.9 1.4 20 98-117 69-88 (109)
40 3pvn_A C-reactive protein; pen 23.2 63 0.0022 24.1 3.2 25 91-115 94-118 (206)
41 4b1m_A Levanase; hydrolase, CB 23.2 1E+02 0.0035 22.4 4.4 30 88-117 129-158 (185)
42 3rsj_A BONT/F; clostridium bot 22.8 82 0.0028 27.1 4.1 25 92-117 145-169 (413)
43 3gx8_A Monothiol glutaredoxin- 22.8 31 0.0011 23.6 1.3 20 98-117 70-89 (121)
44 3rhb_A ATGRXC5, glutaredoxin-C 22.5 32 0.0011 22.5 1.3 20 98-117 69-88 (113)
45 2w3j_A Carbohydrate binding mo 22.3 1.3E+02 0.0045 21.1 4.6 40 101-142 66-112 (145)
46 3h8q_A Thioredoxin reductase 3 22.2 33 0.0011 22.8 1.3 21 97-117 65-85 (114)
47 1hi9_A Dciaa, dipeptide transp 20.6 47 0.0016 26.8 2.1 17 101-117 119-135 (274)
No 1
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=99.90 E-value=4.7e-24 Score=196.37 Aligned_cols=110 Identities=36% Similarity=0.585 Sum_probs=101.5
Q ss_pred CCeeEEeecCcHHHHHHHHCCCCCCCCccccCcccccccccCCeEEEEEeccccccccccccccccccccccccceeeee
Q psy15572 3 QTISTEATVPGGIYSDLRRGNILKEDVYYRDNDLKYRWVSKTGWTYSTEFEEEDVYYRDNDLKYRWVSKTGWTYSTEFEV 82 (144)
Q Consensus 3 ~~~~~~a~vPg~v~~~L~~ag~i~~dp~~~~n~~~~~wv~~~~W~y~~~f~~~~~~~~~~~~~~~~~~~~~~~y~~~~~v 82 (144)
.+.|.+++|||++|++|+++|.|+ |||++.|+..++|+...+|||+++| ++
T Consensus 24 ~~~w~~~~VP~~~~~~l~~~~~i~-~P~~~~n~~~~~~~~~~~~~Yr~~f----------------------------~~ 74 (848)
T 2je8_A 24 TEKWMPATVPGTVHQDLISHELLP-NPFYGMNEKKIQWVENEDWEYRTSF----------------------------IV 74 (848)
T ss_dssp SCCCEECCSSCCHHHHHHHTTSSC-CTTSTTTTGGGGGGGGSCEEEEEEE----------------------------EE
T ss_pred CCCeeECcCCcHHHHhHHHcCCcC-CCccCccccccccccCCCEEEEEEE----------------------------Ec
Confidence 355899999999999999999999 9999999999999999999999999 78
Q ss_pred cccccCCCCcEEEEECccCcEEEEEECCEEeeeecCCeeEEEEeCccccccCCceEEEEe
Q psy15572 83 TDKNFLALPNQFLVFHGVDTIATIYLNDKELGKTDNMFVRYRFDVKDKLQENESKQNLEL 142 (144)
Q Consensus 83 ~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~~~~fDIt~~Lk~gn~~~~l~~ 142 (144)
| +++.+++++.|+|+|||+.|+|||||++||.++|||++|+||||++|+.|+|.++|.+
T Consensus 75 p-~~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~~~~~~dIt~~l~~G~N~L~V~v 133 (848)
T 2je8_A 75 S-EEQLNRDGIQLIFEGLDTYADVYLNGSLLLKADNMFVGYTLPVKSVLRKGENHLYIYF 133 (848)
T ss_dssp C-HHHHTSSEEEEEESCCBSEEEEEETTEEEEEECBTTCCEEEECGGGCCSEEEEEEEEE
T ss_pred C-hhhcCCCeEEEEECCCCceeEEEECCEEeccccCCCCCEEEcChHhhcCCCcEEEEEE
Confidence 7 3434678999999999999999999999999999999999999999998888888765
No 2
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=99.84 E-value=4.5e-21 Score=179.75 Aligned_cols=107 Identities=16% Similarity=0.316 Sum_probs=96.2
Q ss_pred CCeeEEeecCcHHHHHHHHCCCCCCCCccccCcccccccc-cCCeEEEEEeccccccccccccccccccccccccceeee
Q psy15572 3 QTISTEATVPGGIYSDLRRGNILKEDVYYRDNDLKYRWVS-KTGWTYSTEFEEEDVYYRDNDLKYRWVSKTGWTYSTEFE 81 (144)
Q Consensus 3 ~~~~~~a~vPg~v~~~L~~ag~i~~dp~~~~n~~~~~wv~-~~~W~y~~~f~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 81 (144)
.+-|.+++|||++|++|+++|.|+ ||+|+.|+...+|.. ...|||+++| +
T Consensus 78 ~~~W~~v~VP~~~~~~l~~~~~~~-dp~y~~n~~~~~~~~~~~~~wYrr~f----------------------------~ 128 (1032)
T 2vzs_A 78 TSGWYPVSSRSTVYAGLLQNGKYA-DPFYSTNMQNVPAAQFSVPWWYRTDL----------------------------N 128 (1032)
T ss_dssp CTTCEEEETTCBHHHHHHHTTCSC-CTTSTTGGGGSCSGGGSSCEEEEEEE----------------------------E
T ss_pred CCCceECcCCchhhhhHHhcCCCC-CCccccccccCCccccCccEEEEEEE----------------------------E
Confidence 355899999999999999999999 999999999999987 5699999999 4
Q ss_pred ecccccCCCCcEEEEECccCcEEEEEECCEEeee---ecCCeeEEEEeCccccccCCceEEEEe
Q psy15572 82 VTDKNFLALPNQFLVFHGVDTIATIYLNDKELGK---TDNMFVRYRFDVKDKLQENESKQNLEL 142 (144)
Q Consensus 82 v~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~---~~nmF~~~~fDIt~~Lk~gn~~~~l~~ 142 (144)
+. ..++++.|+|+|||+.|+|||||++||. |+|||++|+||||++|+.|+|.++|.+
T Consensus 129 v~----~~~~~v~L~F~gvd~~a~V~vNG~~vg~~~~h~g~~~~~~~DIt~~l~~G~N~L~V~v 188 (1032)
T 2vzs_A 129 VD----DTSSRTYLDFSGVLSKADVWVNGTKVATKDQVNGAYTRHDLDITAQVHTGVNSVAFKV 188 (1032)
T ss_dssp ES----CCSSEEEEEECCEESBEEEEETTEEEECTTTSBSTTCCEEEECTTTCCSEEEEEEEEE
T ss_pred Ee----CCCCEEEEEECCcccceEEEECCEEecccccccCcceeEEEECcHHhCCCCcEEEEEE
Confidence 52 3578999999999999999999999984 579999999999999998888887764
No 3
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=99.59 E-value=2.3e-15 Score=141.61 Aligned_cols=105 Identities=18% Similarity=0.314 Sum_probs=83.7
Q ss_pred CeeEEeecCcHHHHHHHHCC--CCCCCCccccCcccc----ccc--ccCCeEEEEEeccccccccccccccccccccccc
Q psy15572 4 TISTEATVPGGIYSDLRRGN--ILKEDVYYRDNDLKY----RWV--SKTGWTYSTEFEEEDVYYRDNDLKYRWVSKTGWT 75 (144)
Q Consensus 4 ~~~~~a~vPg~v~~~L~~ag--~i~~dp~~~~n~~~~----~wv--~~~~W~y~~~f~~~~~~~~~~~~~~~~~~~~~~~ 75 (144)
+-|.+++|||+.+. .| ++. +|.|..+...+ ..+ ....|||+++|
T Consensus 75 s~W~~i~VP~~w~~----~g~~~~~-~~~y~n~~~p~~~~~p~vp~~~~~~wYrr~F----------------------- 126 (1024)
T 1yq2_A 75 AAWDTLPVPSHWVM----GQDGKYG-RPIYTNVQYPFPIDPPHVPDANPTGDFRRRF----------------------- 126 (1024)
T ss_dssp TTCEEEEESCCTTS----SSTTTTC-CCEEESSSCSSCSCTTCCCSCCCEEEEEEEE-----------------------
T ss_pred cCCeEEecCchHHH----CCCcccC-CccccccccccccCCCCcCCcCceEEEEEEe-----------------------
Confidence 34889999999874 44 366 77766443221 122 24568999999
Q ss_pred cceeeeecccccC-CC-CcEEEEECccCcEEEEEECCEEeeeecCCeeEEEEeCccccccCCceEEEEe
Q psy15572 76 YSTEFEVTDKNFL-AL-PNQFLVFHGVDTIATIYLNDKELGKTDNMFVRYRFDVKDKLQENESKQNLEL 142 (144)
Q Consensus 76 y~~~~~v~~~~~~-~~-~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~~~~fDIt~~Lk~gn~~~~l~~ 142 (144)
++| +.+. .+ ++++|+|+|||+.|+|||||++||.++|||.+|+||||++|+.|+|.++|.+
T Consensus 127 -----~vp-~~~~~~g~~rv~L~F~gv~~~a~V~vNG~~VG~~~gg~~p~~~DIT~~Lk~G~N~L~V~V 189 (1024)
T 1yq2_A 127 -----DVP-AQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSRLAQEFDVSDALRAGSNLLVVRV 189 (1024)
T ss_dssp -----EEC-GGGGSTTEEEEEEEESCEESCEEEEETTEEEEEECCTTSCEEEECTTTCCSEEEEEEEEE
T ss_pred -----EEC-chHhcCCCceEEEEECCCCceEEEEECCEEEEEEeCCccceEEecHHhccCCCcEEEEEE
Confidence 788 4432 56 8999999999999999999999999999999999999999999888888765
No 4
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=99.57 E-value=3.8e-15 Score=140.03 Aligned_cols=103 Identities=21% Similarity=0.274 Sum_probs=81.6
Q ss_pred CeeEEeecCcHHHHHHHHCCCCCCCCccccCcc-----------cccccc---cCCeEEEEEeccccccccccccccccc
Q psy15572 4 TISTEATVPGGIYSDLRRGNILKEDVYYRDNDL-----------KYRWVS---KTGWTYSTEFEEEDVYYRDNDLKYRWV 69 (144)
Q Consensus 4 ~~~~~a~vPg~v~~~L~~ag~i~~dp~~~~n~~-----------~~~wv~---~~~W~y~~~f~~~~~~~~~~~~~~~~~ 69 (144)
+-|.++.|||+.+. .| .+ .|.|..... ...++. ...|||+++|
T Consensus 78 s~W~~i~VP~~w~~----~g-~~-~p~y~n~~~p~~~~~~~~~~~~p~vp~~~~~~~~Yrr~F----------------- 134 (1010)
T 3bga_A 78 GGWADINVPGNWER----QG-YG-TAIYVNETYEFDDKMFNFKKNPPLVPFAENEVGSYRRTF----------------- 134 (1010)
T ss_dssp TTSEEEEESSCGGG----GT-SS-CCEEESSSCTTSBGGGTBCCBTTBCCSTTCEEEEEEEEE-----------------
T ss_pred CCCeEEecCCcHHH----cC-CC-CcccccccccccccccccccCCCCcccccCcEEEEEEEe-----------------
Confidence 44889999999875 23 44 665543321 122332 3468899999
Q ss_pred cccccccceeeeecccccCCCCcEEEEECccCcEEEEEECCEEeeeecCCeeEEEEeCccccccCCceEEEEe
Q psy15572 70 SKTGWTYSTEFEVTDKNFLALPNQFLVFHGVDTIATIYLNDKELGKTDNMFVRYRFDVKDKLQENESKQNLEL 142 (144)
Q Consensus 70 ~~~~~~y~~~~~v~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~~~~fDIt~~Lk~gn~~~~l~~ 142 (144)
++| +.+ .+++++|+|+||++.|+|||||++||.++|||.+|+||||++|+.|+|.++|.+
T Consensus 135 -----------~vp-~~~-~g~~v~L~F~gv~~~a~V~vNG~~vG~~~gg~~p~~~DIT~~L~~G~N~L~V~V 194 (1010)
T 3bga_A 135 -----------KVP-ADW-KGRRVVLCCEGVISFYYVWVNGKLLGYNQGSKTAAEWDITDVLSEGENVVALEV 194 (1010)
T ss_dssp -----------ECC-GGG-TTSEEEEEESCEESEEEEEETTEEEEEEECSSSCEEEECGGGCCSSEEEEEEEE
T ss_pred -----------EeC-ccc-CCCEEEEEECCCCceeEEEECCEEEeeEeCCCCcceeehhhhccCCCcEEEEEE
Confidence 787 343 678999999999999999999999999999999999999999999888888875
No 5
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=99.56 E-value=6.1e-15 Score=132.30 Aligned_cols=95 Identities=17% Similarity=0.291 Sum_probs=75.1
Q ss_pred CeeEEeecCcHHHHHHHHCCCCCCCCccccCcccccccccCCeEEEEEeccccccccccccccccccccccccceeeeec
Q psy15572 4 TISTEATVPGGIYSDLRRGNILKEDVYYRDNDLKYRWVSKTGWTYSTEFEEEDVYYRDNDLKYRWVSKTGWTYSTEFEVT 83 (144)
Q Consensus 4 ~~~~~a~vPg~v~~~L~~ag~i~~dp~~~~n~~~~~wv~~~~W~y~~~f~~~~~~~~~~~~~~~~~~~~~~~y~~~~~v~ 83 (144)
+.|.+++||++.+......|. . + + ....|||+++| ++|
T Consensus 23 ~~w~~i~vP~~w~~~~~~~~~-~-~-~-----------~~g~~wYr~~f----------------------------~~p 60 (667)
T 3cmg_A 23 GDTRRVDLPHTWNAQDALAGK-I-D-Y-----------KRGIGNYEKAL----------------------------YIR 60 (667)
T ss_dssp CCCEEECSSCCTTTTTGGGTC-T-T-C-----------CCSEEEEEEEE----------------------------ECC
T ss_pred CCCeEEecCChHHhcCCccCC-C-c-C-----------cceeEEEEEEE----------------------------ECC
Confidence 457889999987542111121 1 1 1 12469999999 787
Q ss_pred ccccCCCCcEEEEECccCcEEEEEECCEEeeeecCCeeEEEEeCccccccC-CceEEEEe
Q psy15572 84 DKNFLALPNQFLVFHGVDTIATIYLNDKELGKTDNMFVRYRFDVKDKLQEN-ESKQNLEL 142 (144)
Q Consensus 84 ~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~~~~fDIt~~Lk~g-n~~~~l~~ 142 (144)
+. .+++++.|+|+||++.|+|||||++||.+.|||.+|+||||++|+.| +|.++|.+
T Consensus 61 -~~-~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~~~~~~dit~~l~~G~~N~l~V~v 118 (667)
T 3cmg_A 61 -PE-WKGKRLFLRFDGVNSIADVFINRKHIGEHRGGYGAFIFEITDLVKYGEKNSVLVRA 118 (667)
T ss_dssp -GG-GTTSEEEEEESCCBSEEEEEETTEEEEEEECSSSCEEEECTTTSCTTSEEEEEEEE
T ss_pred -cc-cCCCEEEEEECCccceeEEEECCEEEeeecCCcccEEEECCHHHCCCCCcEEEEEE
Confidence 33 46789999999999999999999999999999999999999999987 78888765
No 6
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=99.53 E-value=1.1e-14 Score=137.06 Aligned_cols=101 Identities=18% Similarity=0.303 Sum_probs=78.3
Q ss_pred EEeecCcHHHHHHHHCCCCCCCCccccCcccc----ccc--ccCCeEEEEEeccccccccccccccccccccccccceee
Q psy15572 7 TEATVPGGIYSDLRRGNILKEDVYYRDNDLKY----RWV--SKTGWTYSTEFEEEDVYYRDNDLKYRWVSKTGWTYSTEF 80 (144)
Q Consensus 7 ~~a~vPg~v~~~L~~ag~i~~dp~~~~n~~~~----~wv--~~~~W~y~~~f~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 80 (144)
.++.|||+.+. .| ++ +|.|....... ..+ ....|||+++|
T Consensus 82 ~~i~VP~~w~~----~g-~~-~p~y~n~~~p~~~~~p~~p~~~~~g~Yrr~F---------------------------- 127 (1023)
T 1jz7_A 82 DTVVVPSNWQM----HG-YD-APIYTNVTYPITVNPPFVPTENPTGCYSLTF---------------------------- 127 (1023)
T ss_dssp EEEEESCCGGG----GT-SS-CCEEESSSCSSCSCTTCCCSSCCEEEEEEEE----------------------------
T ss_pred cEEccCCcHHh----CC-CC-CccccccccccccCCCccCCcCcEEEEEEEE----------------------------
Confidence 57899999886 23 45 66554322111 112 24568899999
Q ss_pred eecccccCCCCcEEEEECccCcEEEEEECCEEeeeecCCeeEEEEeCccccccCCceEEEEe
Q psy15572 81 EVTDKNFLALPNQFLVFHGVDTIATIYLNDKELGKTDNMFVRYRFDVKDKLQENESKQNLEL 142 (144)
Q Consensus 81 ~v~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~~~~fDIt~~Lk~gn~~~~l~~ 142 (144)
++| +.+..++++.|+|+||++.|+|||||++||.++|||.+|+||||++|+.|+|.++|.+
T Consensus 128 ~vp-~~~~~~~~v~L~F~gv~~~a~V~vNG~~vG~~~gg~~p~~~DIT~~L~~G~N~L~V~V 188 (1023)
T 1jz7_A 128 NVD-ESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMV 188 (1023)
T ss_dssp EEC-HHHHHSSEEEEEESCEESEEEEEETTEEEEEEECTTSCEEEECTTTCCSEEEEEEEEE
T ss_pred EeC-chhcCCCEEEEEECCCCcceEEEECCEEEccccCCCCceEEecHhhccCCCcEEEEEE
Confidence 787 3432278999999999999999999999999999999999999999998888888765
No 7
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=99.50 E-value=4.9e-14 Score=129.72 Aligned_cols=60 Identities=20% Similarity=0.403 Sum_probs=54.5
Q ss_pred eecccccCCCCcEEEEECccCcEEEEEECCEEeeeecCCeeEEEEeCccccccCCceEEEEe
Q psy15572 81 EVTDKNFLALPNQFLVFHGVDTIATIYLNDKELGKTDNMFVRYRFDVKDKLQENESKQNLEL 142 (144)
Q Consensus 81 ~v~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~~~~fDIt~~Lk~gn~~~~l~~ 142 (144)
++| +. ..+++++|+|+||++.|+|||||++||.++|||.+|+||||++|+.|+|.++|.+
T Consensus 75 ~vp-~~-~~~~~v~L~f~gv~~~a~V~vNG~~vG~~~~g~~pf~~DIT~~Lk~G~N~L~V~V 134 (801)
T 3gm8_A 75 TIP-SK-WKNKKVQILFEGVYLNSEVWINGHWLGKRPNGYISFVYDLTPYLQEGKNQIAVKV 134 (801)
T ss_dssp ECC-SG-GGSCEEEEEESCCBSCEEEEETTEEEEEECCSSCCEEEECGGGCCSSEEEEEEEE
T ss_pred EcC-cc-cCCCEEEEEECccceEEEEEECCEEeecccCCcccEEEECcHhccCCCcEEEEEE
Confidence 787 33 4678999999999999999999999999999999999999999998888888765
No 8
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=99.44 E-value=2e-13 Score=123.76 Aligned_cols=60 Identities=22% Similarity=0.347 Sum_probs=54.6
Q ss_pred eecccccCCCCcEEEEECccCcEEEEEECCEEeeeecCCeeEEEEeCccccccC-CceEEEEe
Q psy15572 81 EVTDKNFLALPNQFLVFHGVDTIATIYLNDKELGKTDNMFVRYRFDVKDKLQEN-ESKQNLEL 142 (144)
Q Consensus 81 ~v~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~~~~fDIt~~Lk~g-n~~~~l~~ 142 (144)
.+| +. ..+++++|+|+||++.|+|||||++||.++|||.+|+||||++|+.| +|.++|.+
T Consensus 69 ~~p-~~-~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~g~~~f~~dIt~~l~~G~~N~l~V~v 129 (692)
T 3fn9_A 69 FFP-HD-LEGKRVFLRFEGVGACAEVYVNGKLAGTHKGGYSAFACEIGTALKLGAENEIIVKA 129 (692)
T ss_dssp EEC-GG-GTTCEEEEEESCCBSEEEEEETTEEEEEEECTTSCEEEECGGGCCTTEEEEEEEEE
T ss_pred EEC-ch-hCCCeEEEEECCccEeeEEEECCEEeeeEcCCcceEEEEChHhcCCCCceEEEEEE
Confidence 888 34 47899999999999999999999999999999999999999999987 78887765
No 9
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=99.40 E-value=5.6e-13 Score=118.72 Aligned_cols=65 Identities=18% Similarity=0.301 Sum_probs=55.0
Q ss_pred cceeeeecccccCCCCcEEEEECccCcEEEEEECCEEeeeecCCeeEEEEeCccccccCCc-eEEEEe
Q psy15572 76 YSTEFEVTDKNFLALPNQFLVFHGVDTIATIYLNDKELGKTDNMFVRYRFDVKDKLQENES-KQNLEL 142 (144)
Q Consensus 76 y~~~~~v~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~~~~fDIt~~Lk~gn~-~~~l~~ 142 (144)
|+|+|.+| +. ..++++.|+|+||++.|+|||||++||.+.|||.+|+||||++|+.|++ .++|..
T Consensus 71 Y~~~f~~p-~~-~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~~p~~~dit~~l~~G~nn~l~V~v 136 (605)
T 3lpf_A 71 YQREVFIP-KG-WAGQRIVLRFDAVTHYGKVWVNNQEVMEHQGGYTPFEADVTPYVIAGKSVRITVCV 136 (605)
T ss_dssp EEEEEECC-TT-CSSCEEEEEESCCBSEEEEEESSCEEEEECCSSSCEEEECGGGCCTTSEEEEEEEE
T ss_pred EEEEEECC-cc-cCCCEEEEEECCcceEEEEEECCEEEEEEcCCCCcceeechhhccCCCeEEEEEEE
Confidence 33344888 34 4678999999999999999999999999999999999999999998754 666654
No 10
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=99.36 E-value=7.7e-13 Score=117.41 Aligned_cols=66 Identities=11% Similarity=0.233 Sum_probs=56.3
Q ss_pred cceeeeeccccc--CCCCcEEEEECccCcEEEEEECCEEeeeecCCeeEEEEeCccccccCC----ceEEEEe
Q psy15572 76 YSTEFEVTDKNF--LALPNQFLVFHGVDTIATIYLNDKELGKTDNMFVRYRFDVKDKLQENE----SKQNLEL 142 (144)
Q Consensus 76 y~~~~~v~~~~~--~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~~~~fDIt~~Lk~gn----~~~~l~~ 142 (144)
|+|+|.+| +.+ ..++++.|+|+||++.|+|||||++||.+.|||.+|+||||++|+.|+ |.++|.+
T Consensus 81 Yr~~f~~p-~~~~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~g~~~~~~dit~~l~~g~~~~~n~l~V~v 152 (613)
T 3hn3_A 81 YEREVILP-ERWTQDLRTRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGPLPSRLRITIAI 152 (613)
T ss_dssp EEEEECCC-HHHHHCTTEEEEEEESCCCSEEEEEETTEEEEEEESSSSCEEEECHHHHCCC---CCEEEEEEE
T ss_pred EEEEEEeC-chhhhcCCCEEEEEECCcceEEEEEECCEEEeEEcCCcceEEEEChhhhcCCCCCcceEEEEEE
Confidence 66667998 443 247899999999999999999999999999999999999999999864 6776654
No 11
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=99.36 E-value=4.7e-13 Score=126.14 Aligned_cols=61 Identities=21% Similarity=0.311 Sum_probs=54.8
Q ss_pred eecccccCCCCcEEEEECccCcEEEEEECCEEeeeecCCeeEEEEeCccccccCCceEEEEe
Q psy15572 81 EVTDKNFLALPNQFLVFHGVDTIATIYLNDKELGKTDNMFVRYRFDVKDKLQENESKQNLEL 142 (144)
Q Consensus 81 ~v~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~~~~fDIt~~Lk~gn~~~~l~~ 142 (144)
++| +.+..+++++|+|+||++.|+|||||++||.++|||.+|+||||++|+.|+|.++|.+
T Consensus 121 ~vp-~~~~~~~~v~L~F~gv~~~a~V~vNG~~vG~~~gg~~p~~~DIT~~lk~G~N~L~V~V 181 (1032)
T 3oba_A 121 ELD-SKSIESFEHRLRFEGVDNCYELYVNGQYVGFNKGSRNGAEFDIQKYVSEGENLVVVKV 181 (1032)
T ss_dssp EEC-HHHHHHEEEEEEESCEESEEEEEETTEEEEEEECTTSCEEEECTTTCCSEEEEEEEEE
T ss_pred EEC-chhcCCCEEEEEECCcceeEEEEECCEEEEEEeCCcccEEEEChhhccCCcEEEEEEE
Confidence 888 4432578999999999999999999999999999999999999999998888888765
No 12
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=97.41 E-value=0.00024 Score=66.99 Aligned_cols=65 Identities=14% Similarity=0.282 Sum_probs=52.4
Q ss_pred ccccccc-----cceeeeecccccCCCCcEEEEEC---ccCcEEEEEECCEEeeeecCCee----EEEEeCcccccc-CC
Q psy15572 69 VSKTGWT-----YSTEFEVTDKNFLALPNQFLVFH---GVDTIATIYLNDKELGKTDNMFV----RYRFDVKDKLQE-NE 135 (144)
Q Consensus 69 ~~~~~~~-----y~~~~~v~~~~~~~~~~v~LvFe---GlDT~A~V~LNG~~Vg~~~nmF~----~~~fDIt~~Lk~-gn 135 (144)
.++.||- |++.|.++ + ....|.|+ |+...+.|||||+.+|.+.+.+. .+.|++ ..|+. ++
T Consensus 681 ~sdYGf~~G~lwYR~~F~~~-~-----~~~~L~~~~~gG~~~~~~VwvNG~~lGs~~g~~~~~~~~~~~~l-~~L~~gg~ 753 (971)
T 1tg7_A 681 ASDYGYHTGALLFRGHFTAN-G-----KEKTFFVQTKGGTAYGHSIWINETYVGSWAGTSINDNNNATYTL-PTLQSGKN 753 (971)
T ss_dssp GGGGTCCSSCEEEEEEEECC-S-----CCCEEEEEEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEC-CCCCTTCE
T ss_pred CCccCccCceEEEEEEEECC-C-----cceEEEEEecCcccceEEEEECCEEEeeeecCCCcccCceEEEE-eEecCCCc
Confidence 4555542 99999887 2 14589999 99999999999999999999998 889999 78876 55
Q ss_pred ceEEE
Q psy15572 136 SKQNL 140 (144)
Q Consensus 136 ~~~~l 140 (144)
|.+.|
T Consensus 754 NvI~V 758 (971)
T 1tg7_A 754 YVITV 758 (971)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 65554
No 13
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=97.37 E-value=0.00054 Score=63.73 Aligned_cols=61 Identities=8% Similarity=0.224 Sum_probs=45.7
Q ss_pred cceeeeecccccC-CCCcEEEEECccCcEEEEEECCEEeeeecCCee------EEEEeCccccccC-CceEEEEe
Q psy15572 76 YSTEFEVTDKNFL-ALPNQFLVFHGVDTIATIYLNDKELGKTDNMFV------RYRFDVKDKLQEN-ESKQNLEL 142 (144)
Q Consensus 76 y~~~~~v~~~~~~-~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~------~~~fDIt~~Lk~g-n~~~~l~~ 142 (144)
|+|+|+++ +. . ...++++.++|+- ++||||+.||...+ +. ...+|||++|+.| +|.+++.|
T Consensus 26 fRk~f~~~-~~-~~~~a~l~i~a~g~y---~~~iNG~~vg~~p~-~~~~~~~~y~~~Dvt~~L~~G~~N~i~v~~ 94 (956)
T 2okx_A 26 FRGSFDAP-AS-VEGPAMLHITADSRY---VLFVNGEQVGRGPV-RSWPKEQFYDSYDIGGQLRPGVRNTIAVLV 94 (956)
T ss_dssp EEEEEECC-SC-CSSCCEEEEEEESEE---EEEETTEEEEEECC-CCBTTEEEEEEEECTTTCCTTSEEEEEEEE
T ss_pred eEEEEECC-CC-ccCceEEEEEecCcE---EEEECCEECCCCCC-ccccccccceEEechhhcCCCCCcEEEEEE
Confidence 45555887 22 2 3456777777765 99999999998666 22 4679999999998 89888876
No 14
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=97.03 E-value=0.0013 Score=62.31 Aligned_cols=61 Identities=18% Similarity=0.295 Sum_probs=49.4
Q ss_pred cceeeeecccccCCCCcEEEEECccCc-EEEEEECCEEeeeec-CCee---EEEEeCcccccc-CCceEEEE
Q psy15572 76 YSTEFEVTDKNFLALPNQFLVFHGVDT-IATIYLNDKELGKTD-NMFV---RYRFDVKDKLQE-NESKQNLE 141 (144)
Q Consensus 76 y~~~~~v~~~~~~~~~~v~LvFeGlDT-~A~V~LNG~~Vg~~~-nmF~---~~~fDIt~~Lk~-gn~~~~l~ 141 (144)
||+.|+.+ . ..+++.|.|+|... .+.|||||+.||++. +++. .++|++ +.|+. ++|++.|-
T Consensus 715 YRG~F~a~-~---~~~~v~L~~~GG~af~~sVWLNG~flGs~~g~g~~~~~~~~~~l-P~L~~g~~NVLtV~ 781 (1003)
T 3og2_A 715 FRGRFTAR-T---ARQQLFLSTQGGSAFASSVWLNDRFIGSFTGFDAASAANSSYTL-DRLVRGRRYILTVV 781 (1003)
T ss_dssp EEEEEECS-S---SSEEEEEEEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEE-CSCCTTCEEEEEEE
T ss_pred EeeEEECC-C---CceEEEEEEccccccccEEEECCEEeccccCCCcccccceEEEC-CcccCCCceEEEEE
Confidence 99999887 2 33799999999999 779999999999999 6675 788999 45765 56666654
No 15
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=96.45 E-value=0.0063 Score=57.43 Aligned_cols=65 Identities=20% Similarity=0.183 Sum_probs=46.0
Q ss_pred cceeeeecccccCCCCcEEEEECccC-----cEEEEEECCEEeeeec-CCe--eEEEEeCcccc-ccCCceEEEEe
Q psy15572 76 YSTEFEVTDKNFLALPNQFLVFHGVD-----TIATIYLNDKELGKTD-NMF--VRYRFDVKDKL-QENESKQNLEL 142 (144)
Q Consensus 76 y~~~~~v~~~~~~~~~~v~LvFeGlD-----T~A~V~LNG~~Vg~~~-nmF--~~~~fDIt~~L-k~gn~~~~l~~ 142 (144)
|++.|+|+ .....+..+.|.|.+++ ..+.+||||..||+.- +.. +.|.+.-. .| +.|+|+++|.+
T Consensus 855 yr~~f~L~-~p~g~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGry~~~~~pqr~y~VP~g-iLn~~G~N~i~vrv 928 (971)
T 1tg7_A 855 YSTSFDLD-LPSGYDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGKYVNNIGPQTSFPVPEG-ILNYHGTNWLALSL 928 (971)
T ss_dssp EEEEEECC-CCTTEECCEEEEECCCCSSCCCEEEEEEETTEEEEEEETTTCSCCEEEECBT-TBCTTSEEEEEEEE
T ss_pred EEEEEecc-CCCCCCceEEEEcCCCCCCCccceEEEEECCEEEeeecCCCCCCEEEECCHH-HhCcCCccEEEEEE
Confidence 77777865 12112236888999998 7999999999999985 443 44555543 56 67889988843
No 16
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=90.57 E-value=0.45 Score=42.65 Aligned_cols=60 Identities=17% Similarity=0.154 Sum_probs=43.8
Q ss_pred ccccccccccccc-cceeeeecccccCCCCcEEEEECccCcEEEEEECCEEeeeecCCeeEEEEeCc
Q psy15572 63 DLKYRWVSKTGWT-YSTEFEVTDKNFLALPNQFLVFHGVDTIATIYLNDKELGKTDNMFVRYRFDVK 128 (144)
Q Consensus 63 ~~~~~~~~~~~~~-y~~~~~v~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~~~~fDIt 128 (144)
..+.++....||. |++++..+ ...-.|.+.++--.|.|||||+.+|..+.......+.++
T Consensus 373 ~~~E~l~q~~gy~lY~t~i~~~------~~~~~L~i~~~~D~a~Vfvng~~~G~~~~~~~~~~~~~~ 433 (612)
T 3d3a_A 373 RTMEAFDQGWGSILYRTSLSAS------DKEQTLLITEAHDWAQVFLNGKKLATLSRLKGEGVVKLP 433 (612)
T ss_dssp CBGGGGTCCSSEEEEEEEECCB------SSCEEEEEEEEESEEEEEETTEEEEEEETTTTCCEEEEC
T ss_pred CCHHHhCCCCCeEEEEEEecCC------CCCceEEecCCCeEEEEEECCEEEEEEEcccCCceEEee
Confidence 4455666677776 98887552 133478888889999999999999998876555556553
No 17
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=90.20 E-value=0.26 Score=44.37 Aligned_cols=52 Identities=12% Similarity=0.143 Sum_probs=35.1
Q ss_pred cceeeeecccccCCCCcEEEEECccCcEEEEEECCEEeeeecCCeeEEEEeCccccccCCceEEEEeCC
Q psy15572 76 YSTEFEVTDKNFLALPNQFLVFHGVDTIATIYLNDKELGKTDNMFVRYRFDVKDKLQENESKQNLELGE 144 (144)
Q Consensus 76 y~~~~~v~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~~~~fDIt~~Lk~gn~~~~l~~~~ 144 (144)
+||+|+++ + . .++++.- .-.-+++|||+.||. | +-+-.|+.|+|.+.+.||.
T Consensus 61 ~rk~f~~~-~---~-a~l~i~a---~G~ye~~iNG~~vg~----y-----~~r~~L~~G~N~i~v~lg~ 112 (739)
T 3cih_A 61 FSKVLNLS-E---P-EEVFIAA---EGTYNVKLDGKLQFG----M-----PETLLLPAGKHSLNIKVWN 112 (739)
T ss_dssp EEEEEEES-S---C-EEEEEEE---ESEEEEEETTEECSS----C-----CSEEEECSEEEEEEEEEEC
T ss_pred EEEEEEcC-C---C-cEEEEEE---cCcEEEEECCEEccC----C-----CCceEecCCceEEEEEEEe
Confidence 45556886 2 1 3555553 347899999999993 1 2222588899999999874
No 18
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=77.28 E-value=7.6 Score=34.71 Aligned_cols=60 Identities=17% Similarity=0.285 Sum_probs=43.3
Q ss_pred ccceeeeecccccCCCCcEEEEECccCcEEEEEECCEEeeeec--C-CeeEEEEeCcccccc-CCceEEEEe
Q psy15572 75 TYSTEFEVTDKNFLALPNQFLVFHGVDTIATIYLNDKELGKTD--N-MFVRYRFDVKDKLQE-NESKQNLEL 142 (144)
Q Consensus 75 ~y~~~~~v~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~--n-mF~~~~fDIt~~Lk~-gn~~~~l~~ 142 (144)
+|+..|+++ + ...++|.+.|- ....|||||+-||+-= | +-+=| ++- +.||. +|.++++|+
T Consensus 510 ~yk~~f~~~-~----~~Dt~Ld~~g~-gKG~vwVNG~nlGRYW~~GPqqtlY-vP~-~~Lk~g~N~ivvfE~ 573 (612)
T 3d3a_A 510 YYRSTFNLN-E----LGDTFLNMMNW-SKGMVWVNGHAIGRYWEIGPQQTLY-VPG-CWLKKGENEIIILDM 573 (612)
T ss_dssp EEEEEEEES-S----CCBEEEECTTC-CEEEEEETTEEEEEEETTCSCCEEE-ECG-GGCCSEEEEEEEEES
T ss_pred EEEEEEECC-C----CCcEEEecCCC-CcEEEEECCEeEEeEEecCCEEEEE-ecH-HHcCCCCcEEEEEEE
Confidence 488888887 1 23499999995 8999999999999733 2 33334 443 46776 577788877
No 19
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=71.27 E-value=4.8 Score=36.14 Aligned_cols=49 Identities=14% Similarity=0.087 Sum_probs=35.8
Q ss_pred cccccccccc-cceeeeecccccCCCCcEEEEECccCcEEEEEECCEEeeeecCCe
Q psy15572 66 YRWVSKTGWT-YSTEFEVTDKNFLALPNQFLVFHGVDTIATIYLNDKELGKTDNMF 120 (144)
Q Consensus 66 ~~~~~~~~~~-y~~~~~v~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF 120 (144)
..+.-..||. |++.+..+ ...-.|.+.++--.|.|||||+.+|..+...
T Consensus 377 E~lgq~~GyvlY~t~i~~~------~~~~~L~~~~~~Dra~Vfvdg~~~g~l~r~~ 426 (595)
T 4e8d_A 377 EELGQSYGYLLYRTETNWD------AEEERLRIIDGRDRAQLYVDGQWVKTQYQTE 426 (595)
T ss_dssp GGGTCCSSEEEEEEEEECS------SSSEEEEEEEEESEEEEEETTEEEEEEEGGG
T ss_pred HHcCCCcCeEEEEeccCCC------CCCceeecCCCceEEEEEECCEEEEEEEccc
Confidence 3445566775 88776432 2345778999999999999999999875433
No 20
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=63.10 E-value=5.3 Score=36.26 Aligned_cols=59 Identities=12% Similarity=0.101 Sum_probs=37.1
Q ss_pred cccccccccc-cceeeeecccccCCCCcEEEEECccCcEEEEEECCEEeeeecCCeeEEEEeCc
Q psy15572 66 YRWVSKTGWT-YSTEFEVTDKNFLALPNQFLVFHGVDTIATIYLNDKELGKTDNMFVRYRFDVK 128 (144)
Q Consensus 66 ~~~~~~~~~~-y~~~~~v~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF~~~~fDIt 128 (144)
..+.-..||. |++.+..+ . .......|.+.++--.|.|||||+.+|.-+-.. ...++++
T Consensus 384 E~l~Q~~GyvlY~t~i~~~-~--~~~~~l~l~~~~v~Dra~Vfvdg~~~G~l~r~~-~~~l~~~ 443 (654)
T 3thd_A 384 IQVKQHYGFVLYRTTLPQD-C--SNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNN-VITLNIT 443 (654)
T ss_dssp GGGTCCSSEEEEEEECSSC-E--EEEEEEECTTCCEESEEEEEETTEEEEEEETTT-BCEEEEE
T ss_pred HHhCCCcCeEEEEeecCCC-C--CCCcceeeccCCcceEEEEEECCEEEEEEeccc-ceeEecc
Confidence 4445566775 88766322 0 011223445799999999999999999876422 2455554
No 21
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=62.87 E-value=16 Score=34.74 Aligned_cols=68 Identities=18% Similarity=0.149 Sum_probs=43.1
Q ss_pred ccceeeeecccccCCCCcEEEEECccC----cEEEEEECCEEeeeecCCee-EEEEeCcc-cccc-CCceEEEEe
Q psy15572 75 TYSTEFEVTDKNFLALPNQFLVFHGVD----TIATIYLNDKELGKTDNMFV-RYRFDVKD-KLQE-NESKQNLEL 142 (144)
Q Consensus 75 ~y~~~~~v~~~~~~~~~~v~LvFeGlD----T~A~V~LNG~~Vg~~~nmF~-~~~fDIt~-~Lk~-gn~~~~l~~ 142 (144)
+|+++|+|+=...--+-.+-|+|+... +.|.|||||=+.|+--+--- +.+|.|.+ .|.- |+|.++|.|
T Consensus 886 fyrt~f~LdlP~~g~Dvpl~~~f~~~~~~~~yRa~lfVNG~q~Gkyv~~iGPQt~FpvP~GILn~~G~Ntialal 960 (1003)
T 3og2_A 886 FYAAKLPLHLPAQEYDIPLSFVFDNATAAAPYRALLYVNGFQYGKYVSNIGPQTEFPVPEGILDYNGDNWIGVAL 960 (1003)
T ss_dssp EEEEEEEEECCTTTEECCEEEEECCCSSCCCEEEEEEETTEEEEEEETTTCCCCEEEECBTTBCTEEEEEEEEEE
T ss_pred EEEEEeecCCCcccCceeEEEEECCCCCCcceEEEEEEeceeeeeecCCCCCcceecCCcccccCCCcceEEEEE
Confidence 366665554000001235788897654 79999999999997554332 35677765 4443 888888876
No 22
>4b0m_A F1 capsule-anchoring protein; protein transport, chaperone-usher pathway, PILI assembly; 1.80A {Yersinia pestis} PDB: 4b0e_A
Probab=50.35 E-value=11 Score=27.07 Aligned_cols=20 Identities=10% Similarity=0.401 Sum_probs=16.0
Q ss_pred CcEEEEEECCEEeeeecCCe
Q psy15572 101 DTIATIYLNDKELGKTDNMF 120 (144)
Q Consensus 101 DT~A~V~LNG~~Vg~~~nmF 120 (144)
.|..+|||||+.+++.+=.|
T Consensus 31 ~Y~vdI~vN~~~~~~~~i~F 50 (136)
T 4b0m_A 31 NYFVNVFVNGRKVDSGNIDF 50 (136)
T ss_dssp EEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEEECCccccceEEEE
Confidence 47889999999999865444
No 23
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=47.46 E-value=59 Score=29.10 Aligned_cols=68 Identities=16% Similarity=0.246 Sum_probs=45.6
Q ss_pred cccccccccceeeeecccccCCCCcEEEEECccCcEEEEEECCEEeeeec--CCeeEEEEeCcccccc-CCceEEEEe
Q psy15572 68 WVSKTGWTYSTEFEVTDKNFLALPNQFLVFHGVDTIATIYLNDKELGKTD--NMFVRYRFDVKDKLQE-NESKQNLEL 142 (144)
Q Consensus 68 ~~~~~~~~y~~~~~v~~~~~~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~--nmF~~~~fDIt~~Lk~-gn~~~~l~~ 142 (144)
|....+=+|+..|+++ .....+|.+.|- +..-|||||.-+|+-= |=-.+--+. .++|+. .|.++++||
T Consensus 501 ~~~~~P~fy~g~f~~~-----~~~DTfLd~~gw-gKG~v~VNG~nLGRYW~~GPQ~tLYvP-~~~Lk~G~NeIvvfEl 571 (595)
T 4e8d_A 501 WTQGQPAFYAYDFTVE-----EPKDTYLDLSEF-GKGVAFVNGQNLGRFWNVGPTLSLYIP-HSYLKEGANRIIIFET 571 (595)
T ss_dssp CCTTSCEEEEEEEEES-----SCCBEEEECTTC-CEEEEEETTEEEEEEETTCSBCEEEEC-GGGSCSEEEEEEEEES
T ss_pred cCCCCCeEEEEEEEcC-----CCCCEEEeCCCC-ceEEEEECCeeeecccCCCCeEEEEec-HHHhCcCCceEEEEEe
Confidence 4334455688888876 225689999986 6889999999999853 322221132 346776 477888887
No 24
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=46.94 E-value=17 Score=33.29 Aligned_cols=41 Identities=12% Similarity=0.255 Sum_probs=33.3
Q ss_pred cEEEEEECCEEeeee----cCCeeEEEEeCccccccCCceEEEEe
Q psy15572 102 TIATIYLNDKELGKT----DNMFVRYRFDVKDKLQENESKQNLEL 142 (144)
Q Consensus 102 T~A~V~LNG~~Vg~~----~nmF~~~~fDIt~~Lk~gn~~~~l~~ 142 (144)
+.-.|+|||+.||.. .+.....+++|...+..+-|.+.+++
T Consensus 93 S~LkV~LNge~VGtlpl~~~~~~~~~~i~Ipp~l~~gfN~L~fe~ 137 (707)
T 4hg6_B 93 SQIIVRMNDQEIGRFTPRQFGALGAVTMPLGEAVRAGDNLVTIEA 137 (707)
T ss_dssp BEEEEEETTEEEEEECCCCCSSCCCBCCCCCSSSCSSEEEEEEEE
T ss_pred ceEEEEECCEEEEEEecCCCCCceeEEEecChHHcCCcceEEEEE
Confidence 667899999999975 45688899999988887777777764
No 25
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=45.85 E-value=14 Score=25.61 Aligned_cols=17 Identities=29% Similarity=0.427 Sum_probs=14.3
Q ss_pred CcEEEEEECCEEeeeec
Q psy15572 101 DTIATIYLNDKELGKTD 117 (144)
Q Consensus 101 DT~A~V~LNG~~Vg~~~ 117 (144)
.+..+|+|||+.+++.+
T Consensus 32 ~Y~vdI~vN~~~~~~~~ 48 (125)
T 3bwu_D 32 TYRVDIYLNNGYMATRD 48 (125)
T ss_dssp EEEEEEEETTEEEEEEE
T ss_pred EEEEEEEECCeEccceE
Confidence 46789999999999864
No 26
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=44.83 E-value=21 Score=27.05 Aligned_cols=29 Identities=28% Similarity=0.434 Sum_probs=24.7
Q ss_pred CcEEEEECccCcEEEEEECCEEeeeecCC
Q psy15572 91 PNQFLVFHGVDTIATIYLNDKELGKTDNM 119 (144)
Q Consensus 91 ~~v~LvFeGlDT~A~V~LNG~~Vg~~~nm 119 (144)
-|+-++.++-+-.+.+|+||+++++..+.
T Consensus 100 ~Hv~~t~d~~~G~~~lYvdG~~~~~~~~~ 128 (217)
T 3flp_A 100 YHVCHVWSGVDGRMAVYANGSPCGTMENV 128 (217)
T ss_dssp EEEEEEEETTTTEEEEEETTEEEEEESCS
T ss_pred EEEEEEEECCCCEEEEEECCEEecceecc
Confidence 47888999999999999999999875443
No 27
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=44.78 E-value=41 Score=25.84 Aligned_cols=26 Identities=19% Similarity=0.148 Sum_probs=22.7
Q ss_pred CcEEEEECccCcEEEEEECCEEeeeec
Q psy15572 91 PNQFLVFHGVDTIATIYLNDKELGKTD 117 (144)
Q Consensus 91 ~~v~LvFeGlDT~A~V~LNG~~Vg~~~ 117 (144)
-.+-+++|+ +....||+||++|.+.+
T Consensus 108 ntvaf~~d~-~~~~~ly~NG~~V~t~~ 133 (191)
T 2v73_A 108 NTLALKIEK-GIGAKIFLNGSLVKTVS 133 (191)
T ss_dssp EEEEEEEET-TTEEEEEETTEEEEEEE
T ss_pred EEEEEEEcC-CccEEEEECCEEEEEEe
Confidence 467888898 77999999999999884
No 28
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=42.44 E-value=54 Score=29.67 Aligned_cols=67 Identities=19% Similarity=0.291 Sum_probs=43.6
Q ss_pred ccccceeeeeccccc-CCCCcEEEEECccCcEEEEEECCEEeeeec---C-CeeEEEEeCccccccC--CceEEEEeC
Q psy15572 73 GWTYSTEFEVTDKNF-LALPNQFLVFHGVDTIATIYLNDKELGKTD---N-MFVRYRFDVKDKLQEN--ESKQNLELG 143 (144)
Q Consensus 73 ~~~y~~~~~v~~~~~-~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~---n-mF~~~~fDIt~~Lk~g--n~~~~l~~~ 143 (144)
+=+|+..|+++ +.. ....-.+|.+.|- +..-|||||.-+|+-= | |-+=| +. ..+||.| |.++++||-
T Consensus 526 P~fy~g~f~i~-~~~~~~p~DTFLd~~gW-gKGvV~VNG~NLGRYW~~~GPQ~TLY-vP-~p~Lk~G~~NeIiVfEle 599 (654)
T 3thd_A 526 PAFYMGNFSIP-SGIPDLPQDTFIQFPGW-TKGQVWINGFNLGRYWPARGPQLTLF-VP-QHILMTSAPNTITVLELE 599 (654)
T ss_dssp CEEEEEEECCC-SSCTTCSCBEEEECTTC-CSEEEEETTEEEEEECTTTCSCCCEE-EC-GGGCCSSSCEEEEEEESS
T ss_pred CEEEEEEEEcc-CCCCCCCCCEEEeCCCC-CeEEEEECCcccccccCCCCCeEEEE-ec-HHHhCCCCCceEEEEEee
Confidence 34677788876 111 0124689999986 6788999999999853 2 22222 22 3467764 778888873
No 29
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=39.15 E-value=11 Score=26.46 Aligned_cols=21 Identities=33% Similarity=0.453 Sum_probs=17.4
Q ss_pred CccCcEEEEEECCEEeeeecC
Q psy15572 98 HGVDTIATIYLNDKELGKTDN 118 (144)
Q Consensus 98 eGlDT~A~V~LNG~~Vg~~~n 118 (144)
-|--|+-.|||||++||-++.
T Consensus 72 sg~~TvPqIFI~g~~IGG~Dd 92 (118)
T 2wul_A 72 SNWPTIPQVYLNGEFVGGCDI 92 (118)
T ss_dssp HTCCSSCEEEETTEEEECHHH
T ss_pred ccCCCCCeEeECCEEECCHHH
Confidence 355689999999999998763
No 30
>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}
Probab=37.40 E-value=39 Score=24.23 Aligned_cols=25 Identities=20% Similarity=0.118 Sum_probs=20.5
Q ss_pred CCCcEEEEECccCcEEEEEECCEEeee
Q psy15572 89 ALPNQFLVFHGVDTIATIYLNDKELGK 115 (144)
Q Consensus 89 ~~~~v~LvFeGlDT~A~V~LNG~~Vg~ 115 (144)
+...+-|.++|+ ..+|++||.++|+
T Consensus 28 NPN~~~l~i~gl--~y~v~lng~~la~ 52 (136)
T 3but_A 28 NEDVVPIVVSGY--HYTIEMNGVKVAD 52 (136)
T ss_dssp CCSSSCEEEEEE--EEEEEETTEEEEE
T ss_pred CCCCcceeeece--EEEEEECCEEEEe
Confidence 445677888998 5689999999998
No 31
>3uep_A YSCQ-C, type III secretion protein; cytosol, protein transport; 2.25A {Yersinia pseudotuberculosis}
Probab=37.28 E-value=40 Score=22.74 Aligned_cols=49 Identities=16% Similarity=0.012 Sum_probs=33.9
Q ss_pred CCCcEEEEECccCcEEEEEECCEEeeeecCCe--eEEEEeCccccccCCceE
Q psy15572 89 ALPNQFLVFHGVDTIATIYLNDKELGKTDNMF--VRYRFDVKDKLQENESKQ 138 (144)
Q Consensus 89 ~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~nmF--~~~~fDIt~~Lk~gn~~~ 138 (144)
.+.-+.|.- -++...+|++||+.++..+=.- -++.+-|++.+...+++.
T Consensus 42 ~GdVI~Ld~-~~~~~v~i~vng~~i~~Ge~g~~~~~~aVrI~~i~~~~~r~~ 92 (96)
T 3uep_A 42 PGSLIDLTT-PVDGEVRLLANGRLLGHGRLVEIQGRLGVRIERLTEVTISLE 92 (96)
T ss_dssp TTCEEEEEE-ESSCEEEEEETTEEEEEEEEEEETTEEEEEEEEECCCCCCCC
T ss_pred CCCEEEeCC-CCCCcEEEEECCEEEEEEEEEEECCEEEEEEEEecCchhHHH
Confidence 455455543 3588999999999999855211 367788888887766554
No 32
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=31.50 E-value=74 Score=28.47 Aligned_cols=29 Identities=14% Similarity=0.143 Sum_probs=25.1
Q ss_pred CcEEEEECccCcEEEEEECCEEeeeecCC
Q psy15572 91 PNQFLVFHGVDTIATIYLNDKELGKTDNM 119 (144)
Q Consensus 91 ~~v~LvFeGlDT~A~V~LNG~~Vg~~~nm 119 (144)
-+|-++++.-....+||+||+++.+..+.
T Consensus 111 ~~va~~~~~~~~~~~lyvnG~~v~~~~~~ 139 (679)
T 2sli_A 111 NTVALKADAANKQCRLFANGELLATLDKD 139 (679)
T ss_dssp EEEEEEEETTTTEEEEEETTEEEEEEECS
T ss_pred EEEEEEEECCCCeEEEEECCEEeEeeccc
Confidence 46778888888999999999999987765
No 33
>1o9y_A HRCQ2; secretory protein, HRP, type III secretion system, phytopathogenicity; 2.29A {Pseudomonas syringae} SCOP: b.139.1.1
Probab=28.30 E-value=77 Score=20.56 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=25.0
Q ss_pred EEEECc-cCcEEEEEECCEEeeeecCCe--eEEEEeCcccc
Q psy15572 94 FLVFHG-VDTIATIYLNDKELGKTDNMF--VRYRFDVKDKL 131 (144)
Q Consensus 94 ~LvFeG-lDT~A~V~LNG~~Vg~~~nmF--~~~~fDIt~~L 131 (144)
.|.++. ++...+|++||+.+++.+=.- -++.+-|++.+
T Consensus 41 Vi~Ld~~~~e~v~i~vng~~~~~ge~g~~~~~~avrI~~~~ 81 (84)
T 1o9y_A 41 ILEVTGISPGHATLCHGEQVVAEGELVDVEGRLGLQITRLV 81 (84)
T ss_dssp EEEECSSCTTEEEEEETTEEEEEEEEEEETTEEEEEEEEEC
T ss_pred EEEeCCCCCCCEEEEECCEEEEEEEEEEECCEEEEEEEEec
Confidence 455554 678999999999999755211 24555555544
No 34
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=28.04 E-value=45 Score=28.18 Aligned_cols=30 Identities=10% Similarity=0.078 Sum_probs=21.6
Q ss_pred EEEEEECCEEeee-------ecCCeeEEEEeCccccccC
Q psy15572 103 IATIYLNDKELGK-------TDNMFVRYRFDVKDKLQEN 134 (144)
Q Consensus 103 ~A~V~LNG~~Vg~-------~~nmF~~~~fDIt~~Lk~g 134 (144)
.++|+|||..|-. ..|.=+ -+|||++|+.+
T Consensus 142 ~~eI~VNg~~vk~n~rGlKnk~Gt~~--PvDIT~~lr~~ 178 (371)
T 3i2d_A 142 PNELRCNNVQIKDNIRGFKSKPGTAK--PADLTPHLKPY 178 (371)
T ss_dssp SEEEEETTEECCSCCSSCTTSCGGGS--CEECGGGCCCS
T ss_pred ceEEEECCEEeccccccCCCCCCCcC--CCCchhhhccC
Confidence 4699999999963 222222 39999999874
No 35
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=24.66 E-value=68 Score=26.15 Aligned_cols=28 Identities=18% Similarity=0.222 Sum_probs=24.1
Q ss_pred CcEEEEECccCcEEEEEECCEEeeeecC
Q psy15572 91 PNQFLVFHGVDTIATIYLNDKELGKTDN 118 (144)
Q Consensus 91 ~~v~LvFeGlDT~A~V~LNG~~Vg~~~n 118 (144)
.|+-+++++-.....+||||++++....
T Consensus 224 ~HvA~t~d~~~~~~~lYvNG~~~~~~~~ 251 (355)
T 4dqa_A 224 YHVALTYDQPTGKTGIYVNGEKWAGSDW 251 (355)
T ss_dssp EEEEEEEETTTTEEEEEETTEEEEEEEC
T ss_pred EEEEEEEECCCCEEEEEECCEEEEEEec
Confidence 4788999987789999999999998653
No 36
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=24.35 E-value=61 Score=24.22 Aligned_cols=25 Identities=20% Similarity=0.294 Sum_probs=22.1
Q ss_pred CcEEEEECccCcEEEEEECCEEeee
Q psy15572 91 PNQFLVFHGVDTIATIYLNDKELGK 115 (144)
Q Consensus 91 ~~v~LvFeGlDT~A~V~LNG~~Vg~ 115 (144)
-|+-++.++-+-.+.+|+||++++.
T Consensus 92 ~Hv~~twd~~~G~~~lyvdG~~~~~ 116 (204)
T 3kqr_A 92 VHICVSWESSSGIAEFWINGTPLVK 116 (204)
T ss_dssp EEEEEEEETTTCEEEEEETTEECCC
T ss_pred EEEEEEEECCCCeEEEEECCEEeee
Confidence 4778888999999999999999886
No 37
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=24.29 E-value=1.2e+02 Score=27.15 Aligned_cols=28 Identities=21% Similarity=0.170 Sum_probs=24.0
Q ss_pred cEEEEECccCcEEEEEECCEEeeeecCC
Q psy15572 92 NQFLVFHGVDTIATIYLNDKELGKTDNM 119 (144)
Q Consensus 92 ~v~LvFeGlDT~A~V~LNG~~Vg~~~nm 119 (144)
+|-++++.-.-..+|||||+++.+....
T Consensus 134 ~va~~~d~~~~~~~lyvnG~~v~~~~~~ 161 (686)
T 2jkb_A 134 TLVFVSDSKDKTYTMYVNGIEVFSETVD 161 (686)
T ss_dssp EEEEEEETTTTEEEEEETTEEEEEEECS
T ss_pred EEEEEEECCCCeEEEEECCEEEEeeccc
Confidence 6778888778899999999999987754
No 38
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=23.82 E-value=84 Score=21.13 Aligned_cols=26 Identities=12% Similarity=0.256 Sum_probs=20.2
Q ss_pred EEEEEECCEEeeeecCCeeEEEEeCccc
Q psy15572 103 IATIYLNDKELGKTDNMFVRYRFDVKDK 130 (144)
Q Consensus 103 ~A~V~LNG~~Vg~~~nmF~~~~fDIt~~ 130 (144)
.-++++||.++|.. ...||+|..+..
T Consensus 34 kVef~vdg~~vg~d--t~apy~~~w~~~ 59 (98)
T 3pe9_A 34 RVDFLVDGEVIGSD--REAPYEYEWKAV 59 (98)
T ss_dssp EEEEEETTEEEEEE--CSSSEEEEEECC
T ss_pred EEEEEECCEEeccc--ccCCEEEEEEcC
Confidence 55889999999985 467888877654
No 39
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=23.25 E-value=32 Score=22.88 Aligned_cols=20 Identities=20% Similarity=0.395 Sum_probs=16.9
Q ss_pred CccCcEEEEEECCEEeeeec
Q psy15572 98 HGVDTIATIYLNDKELGKTD 117 (144)
Q Consensus 98 eGlDT~A~V~LNG~~Vg~~~ 117 (144)
-|-.|+-.|++||+.||..+
T Consensus 69 ~g~~tvP~ifi~g~~iGG~d 88 (109)
T 3ipz_A 69 SNWPTFPQLYIGGEFFGGCD 88 (109)
T ss_dssp HTCSSSCEEEETTEEEECHH
T ss_pred HCCCCCCeEEECCEEEeCHH
Confidence 36778889999999999765
No 40
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=23.24 E-value=63 Score=24.10 Aligned_cols=25 Identities=8% Similarity=0.154 Sum_probs=22.2
Q ss_pred CcEEEEECccCcEEEEEECCEEeee
Q psy15572 91 PNQFLVFHGVDTIATIYLNDKELGK 115 (144)
Q Consensus 91 ~~v~LvFeGlDT~A~V~LNG~~Vg~ 115 (144)
-|+-++.++-+-.+.+|+||+.++.
T Consensus 94 ~Hv~~twd~~~G~~~lyvdG~~~~~ 118 (206)
T 3pvn_A 94 VHICTSWESASGIVEFWVDGKPRVR 118 (206)
T ss_dssp EEEEEEEETTTCEEEEEETTEECCC
T ss_pred EEEEEEEECCCCeEEEEECCEEccc
Confidence 4788889999999999999999885
No 41
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=23.20 E-value=1e+02 Score=22.43 Aligned_cols=30 Identities=17% Similarity=0.085 Sum_probs=23.3
Q ss_pred CCCCcEEEEECccCcEEEEEECCEEeeeec
Q psy15572 88 LALPNQFLVFHGVDTIATIYLNDKELGKTD 117 (144)
Q Consensus 88 ~~~~~v~LvFeGlDT~A~V~LNG~~Vg~~~ 117 (144)
..++...|.+.-.....++||||+++....
T Consensus 129 ~~g~w~~l~I~~~G~~i~~~vnG~~v~~~~ 158 (185)
T 4b1m_A 129 DVNKKYHLKTEAEGDRFKIYLDDRLVIDAH 158 (185)
T ss_dssp CSSCCEEEEEEEETTEEEEEETTEEEEEEE
T ss_pred CCCCeEEEEEEEECCEEEEEECCEEEEEEE
Confidence 345666777777788999999999988754
No 42
>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} PDB: 3fuq_A
Probab=22.83 E-value=82 Score=27.06 Aligned_cols=25 Identities=12% Similarity=0.236 Sum_probs=21.4
Q ss_pred cEEEEECccCcEEEEEECCEEeeeec
Q psy15572 92 NQFLVFHGVDTIATIYLNDKELGKTD 117 (144)
Q Consensus 92 ~v~LvFeGlDT~A~V~LNG~~Vg~~~ 117 (144)
+|.++.+.+-+ +.|||||++++.++
T Consensus 145 hVTIT~drlg~-~~IYINGklv~~~~ 169 (413)
T 3rsj_A 145 FVTITNNRLGN-SRIYINGNLIDEKS 169 (413)
T ss_dssp EEEEEECTTSE-EEEEETTEEEEEEE
T ss_pred EEEEEecCCCC-eeEEECCEEeccee
Confidence 67888888888 69999999999764
No 43
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=22.79 E-value=31 Score=23.64 Aligned_cols=20 Identities=30% Similarity=0.484 Sum_probs=17.2
Q ss_pred CccCcEEEEEECCEEeeeec
Q psy15572 98 HGVDTIATIYLNDKELGKTD 117 (144)
Q Consensus 98 eGlDT~A~V~LNG~~Vg~~~ 117 (144)
-|-.|+-.|+|||+.||..+
T Consensus 70 sg~~tvP~vfI~g~~iGG~d 89 (121)
T 3gx8_A 70 SEWPTIPQLYVNKEFIGGCD 89 (121)
T ss_dssp HTCCSSCEEEETTEEEESHH
T ss_pred hCCCCCCeEEECCEEEecHH
Confidence 47788999999999999765
No 44
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=22.54 E-value=32 Score=22.49 Aligned_cols=20 Identities=20% Similarity=0.522 Sum_probs=17.1
Q ss_pred CccCcEEEEEECCEEeeeec
Q psy15572 98 HGVDTIATIYLNDKELGKTD 117 (144)
Q Consensus 98 eGlDT~A~V~LNG~~Vg~~~ 117 (144)
.|..++-.|++||+.||..+
T Consensus 69 ~g~~tvP~ifi~g~~igG~~ 88 (113)
T 3rhb_A 69 TGQHTVPNVFVCGKHIGGCT 88 (113)
T ss_dssp HSCCSSCEEEETTEEEESHH
T ss_pred hCCCCcCEEEECCEEEcCcH
Confidence 47788999999999999765
No 45
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=22.33 E-value=1.3e+02 Score=21.10 Aligned_cols=40 Identities=20% Similarity=0.293 Sum_probs=26.1
Q ss_pred CcEEEEEECCEEeeeec----CC---eeEEEEeCccccccCCceEEEEe
Q psy15572 101 DTIATIYLNDKELGKTD----NM---FVRYRFDVKDKLQENESKQNLEL 142 (144)
Q Consensus 101 DT~A~V~LNG~~Vg~~~----nm---F~~~~fDIt~~Lk~gn~~~~l~~ 142 (144)
+..++|.|||..++... +. +....+.|+ |+.|.|.+-|+-
T Consensus 66 ~r~~~l~VNG~~~~~v~~p~Tg~W~~w~t~~~~v~--L~aG~ntI~l~~ 112 (145)
T 2w3j_A 66 ARRATVVVNDSQIKTLDFPTNSNWTQWQTVNVDIP--LKAGTNSIKLVA 112 (145)
T ss_dssp CCCEEEEETTEEEEEECCCCCSCTTSCEEEEEEEE--ECSEEEEEEEEE
T ss_pred CeEEEEEECCeEeeEEEecCCCCCCeeEEEEEEEE--ECCCceEEEEEE
Confidence 55779999998875321 22 666666554 777777666553
No 46
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=22.18 E-value=33 Score=22.83 Aligned_cols=21 Identities=24% Similarity=0.507 Sum_probs=17.5
Q ss_pred ECccCcEEEEEECCEEeeeec
Q psy15572 97 FHGVDTIATIYLNDKELGKTD 117 (144)
Q Consensus 97 FeGlDT~A~V~LNG~~Vg~~~ 117 (144)
..|..|+-.|++||+.||..+
T Consensus 65 ~~g~~tvP~vfi~g~~igG~d 85 (114)
T 3h8q_A 65 ITNQKTVPNIFVNKVHVGGCD 85 (114)
T ss_dssp HHSCCSSCEEEETTEEEESHH
T ss_pred HhCCCccCEEEECCEEEeCHH
Confidence 357789999999999999654
No 47
>1hi9_A Dciaa, dipeptide transport protein DPPA; hydrolase (protease), protease, D-aminopeptidase, decamer, SELF-compartmentalizing; 2.4A {Bacillus subtilis} SCOP: c.99.1.1
Probab=20.56 E-value=47 Score=26.85 Aligned_cols=17 Identities=24% Similarity=0.536 Sum_probs=14.1
Q ss_pred CcEEEEEECCEEeeeec
Q psy15572 101 DTIATIYLNDKELGKTD 117 (144)
Q Consensus 101 DT~A~V~LNG~~Vg~~~ 117 (144)
..+..|||||+.+|+.-
T Consensus 119 ~~~~~v~iNG~~~gE~~ 135 (274)
T 1hi9_A 119 FGVRHFYINDRPVGELG 135 (274)
T ss_dssp TTEEEEEETTEEECHHH
T ss_pred cceEEEEECCEEcCHHH
Confidence 35899999999999743
Done!