Query psy15574
Match_columns 105
No_of_seqs 115 out of 1048
Neff 7.1
Searched_HMMs 46136
Date Sat Aug 17 00:46:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15574.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15574hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01387 MYSc_type_XV Myosin mo 100.0 1.6E-35 3.6E-40 242.9 5.5 93 9-102 367-459 (677)
2 PTZ00014 myosin-A; Provisional 100.0 2E-35 4.3E-40 246.0 5.5 93 9-102 468-560 (821)
3 cd01383 MYSc_type_VIII Myosin 100.0 2.2E-35 4.7E-40 242.2 5.6 93 9-102 371-463 (677)
4 cd01379 MYSc_type_III Myosin m 100.0 2.2E-35 4.8E-40 241.4 4.8 94 9-103 379-472 (653)
5 cd01381 MYSc_type_VII Myosin m 100.0 4.5E-35 9.7E-40 240.2 6.4 93 9-102 368-460 (671)
6 cd01384 MYSc_type_XI Myosin mo 100.0 5.8E-35 1.3E-39 239.6 5.7 92 9-101 373-464 (674)
7 cd01382 MYSc_type_VI Myosin mo 100.0 5.9E-35 1.3E-39 240.8 5.1 93 9-102 403-495 (717)
8 cd01385 MYSc_type_IX Myosin mo 100.0 6.8E-35 1.5E-39 239.7 5.3 93 9-102 382-475 (692)
9 cd01378 MYSc_type_I Myosin mot 100.0 1.1E-34 2.3E-39 238.0 5.3 93 9-102 372-466 (674)
10 COG5022 Myosin heavy chain [Cy 100.0 1E-34 2.3E-39 247.2 5.0 93 9-102 434-527 (1463)
11 cd01377 MYSc_type_II Myosin mo 100.0 2.6E-34 5.7E-39 236.3 5.7 93 9-102 380-473 (693)
12 cd01380 MYSc_type_V Myosin mot 100.0 3.8E-34 8.3E-39 235.3 5.7 92 9-102 374-465 (691)
13 smart00242 MYSc Myosin. Large 100.0 1.1E-33 2.3E-38 232.3 5.2 93 9-102 375-467 (677)
14 cd00124 MYSc Myosin motor doma 100.0 5.9E-33 1.3E-37 227.9 5.2 93 9-102 368-460 (679)
15 cd01386 MYSc_type_XVIII Myosin 100.0 2.3E-32 5.1E-37 226.6 5.4 94 9-102 379-492 (767)
16 PF00063 Myosin_head: Myosin h 100.0 9.8E-32 2.1E-36 220.5 4.0 92 9-101 370-462 (689)
17 KOG0164|consensus 100.0 7.2E-31 1.6E-35 213.4 3.1 93 9-102 381-474 (1001)
18 KOG0161|consensus 100.0 1.8E-29 3.9E-34 221.4 3.9 92 8-101 453-545 (1930)
19 KOG0163|consensus 99.9 5.9E-27 1.3E-31 191.8 4.6 92 9-101 457-548 (1259)
20 KOG0160|consensus 99.9 9.7E-27 2.1E-31 193.4 4.9 92 9-102 374-465 (862)
21 KOG0162|consensus 99.9 3.4E-26 7.3E-31 186.8 2.2 93 9-102 389-486 (1106)
22 KOG4229|consensus 99.9 2.6E-25 5.5E-30 188.3 2.9 97 7-104 431-527 (1062)
23 KOG1830|consensus 20.0 41 0.00088 27.5 0.4 30 7-38 48-77 (518)
No 1
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=100.00 E-value=1.6e-35 Score=242.92 Aligned_cols=93 Identities=44% Similarity=0.638 Sum_probs=91.2
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|. .||||||||||||||||++|++++|..++++|.+|||+|..++|.||++|+|||+++|.|||++|||||+
T Consensus 367 DIfGFE~f~-~NsfEQLcINyaNEkLQ~~f~~~vF~~eq~eY~~EgI~~~~i~f~dN~~~ldLi~~kp~Gil~lLdee~~ 445 (677)
T cd01387 367 DIYGFEDLS-FNSFEQLCINYANENLQYLFNKIVFQEEQEEYIREQLDWTEIAFADNQPVINLISLKPYGILRILDDQCC 445 (677)
T ss_pred ecCccccCC-CCCHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCcCChHHHHHHHhcCCCchHHHHHHHhc
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcccccccC
Q psy15574 89 VNLAQGTRNNHCKD 102 (105)
Q Consensus 89 ~p~~td~~~~~~~~ 102 (105)
+|++||++|++|+.
T Consensus 446 ~p~~td~~~~~kl~ 459 (677)
T cd01387 446 FPQATDHTFLQKCH 459 (677)
T ss_pred CCCCchHHHHHHHH
Confidence 99999999998864
No 2
>PTZ00014 myosin-A; Provisional
Probab=100.00 E-value=2e-35 Score=246.04 Aligned_cols=93 Identities=28% Similarity=0.377 Sum_probs=90.9
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|+ .||||||||||||||||++|++++|..++++|.+|||.|..++|.||++|+|||+++|.|||++|||||+
T Consensus 468 DI~GFE~f~-~NSfEQLcINy~NEkLQq~F~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~idLie~k~~GIl~lLDEec~ 546 (821)
T PTZ00014 468 DIFGFEVFK-NNSLEQLFINITNEMLQKNFVDIVFERESKLYKDEGISTEELEYTSNESVIDLLCGKGKSVLSILEDQCL 546 (821)
T ss_pred ecccccccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCcHHHHHHHhcCCccHHHHHHHHhC
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcccccccC
Q psy15574 89 VNLAQGTRNNHCKD 102 (105)
Q Consensus 89 ~p~~td~~~~~~~~ 102 (105)
+|++||++|++|+.
T Consensus 547 ~p~~tD~~f~~kl~ 560 (821)
T PTZ00014 547 APGGTDEKFVSSCN 560 (821)
T ss_pred CCCCCHHHHHHHHH
Confidence 99999999998864
No 3
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=100.00 E-value=2.2e-35 Score=242.19 Aligned_cols=93 Identities=44% Similarity=0.730 Sum_probs=91.0
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|+ .||||||||||||||||++|++++|..++++|.+|||.|..++|.||++|++||+++|.|||++|||||+
T Consensus 371 DI~GFE~f~-~NsfEQLcINyaNEkLQ~~f~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLdee~~ 449 (677)
T cd01383 371 DIYGFESFD-KNSFEQFCINYANERLQQHFNRHLFKLEQEEYEEDGIDWTKVEFEDNQECLDLFEKKPLGLLSLLDEEST 449 (677)
T ss_pred eccccccCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHHc
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcccccccC
Q psy15574 89 VNLAQGTRNNHCKD 102 (105)
Q Consensus 89 ~p~~td~~~~~~~~ 102 (105)
+|++||++|++|++
T Consensus 450 ~p~~tD~~f~~kl~ 463 (677)
T cd01383 450 FPNATDLTFANKLK 463 (677)
T ss_pred CCCCCHHHHHHHHH
Confidence 99999999998863
No 4
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=100.00 E-value=2.2e-35 Score=241.36 Aligned_cols=94 Identities=40% Similarity=0.652 Sum_probs=91.5
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|+ .||||||||||||||||++|++++|..++++|.+|||+|..++|.||++|+|||+++|.|||++|||||+
T Consensus 379 DI~GFE~f~-~NsfEQLcINyaNEkLQ~~f~~~vf~~Eq~eY~~EgI~~~~i~~~dN~~~ldli~~kp~Gil~lLdee~~ 457 (653)
T cd01379 379 DIFGFENFK-KNSFEQLCINIANEQIQYYFNQHIFAWEQQEYLNEGVDARLVEYEDNRPLLDMFLQKPLGLLALLDEESR 457 (653)
T ss_pred eccccccCC-CCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHhHccCCCcHHHHHHHHhc
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcccccccCC
Q psy15574 89 VNLAQGTRNNHCKDP 103 (105)
Q Consensus 89 ~p~~td~~~~~~~~~ 103 (105)
+|++||++|++|+..
T Consensus 458 ~~~~td~~~~~kl~~ 472 (653)
T cd01379 458 FPQATDQTLVEKFED 472 (653)
T ss_pred CCCCCHHHHHHHHHH
Confidence 999999999998753
No 5
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=100.00 E-value=4.5e-35 Score=240.18 Aligned_cols=93 Identities=41% Similarity=0.645 Sum_probs=91.0
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|+ .||||||||||||||||++|++++|..++++|.+|||.|..++|.||++|+|||+++|.|||++|||||+
T Consensus 368 DIfGFE~f~-~NsfEQLcINy~NEkLQ~~f~~~vf~~eq~eY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLDee~~ 446 (671)
T cd01381 368 DIFGFENFD-VNSFEQLCINFANENLQQFFVQHIFKLEQEEYNLEHINWQHIEFVDNQDALDLIAIKPLNIMSLIDEESK 446 (671)
T ss_pred ecCCcccCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccCccCcHHHHHHHhcCCCCcceechHhhc
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcccccccC
Q psy15574 89 VNLAQGTRNNHCKD 102 (105)
Q Consensus 89 ~p~~td~~~~~~~~ 102 (105)
+|++||++|++|+.
T Consensus 447 ~p~~td~~f~~kl~ 460 (671)
T cd01381 447 FPKGTDQTMLEKLH 460 (671)
T ss_pred CCCCCHHHHHHHHH
Confidence 99999999998863
No 6
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=100.00 E-value=5.8e-35 Score=239.57 Aligned_cols=92 Identities=42% Similarity=0.646 Sum_probs=90.6
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|+ .||||||||||||||||++|++++|..++++|.+|||+|..++|.||++|+|||+++|.|||++|||||+
T Consensus 373 DI~GFE~f~-~NsfEQLcINyaNEkLQ~~f~~~if~~eq~eY~~EgI~~~~i~~~DN~~~ldLie~~~~Gil~lLdee~~ 451 (674)
T cd01384 373 DIYGFESFK-TNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACM 451 (674)
T ss_pred ecccccccC-cCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccCCChHHHHHHHhcCCccHHHHHHHHHc
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCccccccc
Q psy15574 89 VNLAQGTRNNHCK 101 (105)
Q Consensus 89 ~p~~td~~~~~~~ 101 (105)
+|++||++|++|+
T Consensus 452 ~p~~td~~f~~kl 464 (674)
T cd01384 452 FPKSTHETFAQKL 464 (674)
T ss_pred CCCCCHHHHHHHH
Confidence 9999999999885
No 7
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=100.00 E-value=5.9e-35 Score=240.81 Aligned_cols=93 Identities=32% Similarity=0.572 Sum_probs=90.7
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|. .||||||||||||||||++|++++|..++++|.+|||+|..++|.||++|++||+++|.|||++|||||+
T Consensus 403 DIfGFE~f~-~NsfEQLcINyaNEkLQ~~f~~~if~~Eq~~Y~~EgI~~~~i~~~DN~~~ldLie~k~~Gil~lLDee~~ 481 (717)
T cd01382 403 DIAGFEYFE-HNSFEQFCINYCNEKLQQFFNERILKEEQELYQREGLGVNEVHYVDNQDCIDLIEAKLNGILDILDEENR 481 (717)
T ss_pred eccccccCC-CCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccHHHHHHHhcCCccHHHHhHHHhc
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcccccccC
Q psy15574 89 VNLAQGTRNNHCKD 102 (105)
Q Consensus 89 ~p~~td~~~~~~~~ 102 (105)
+|++||++|+.|+.
T Consensus 482 ~p~~tD~~f~~kl~ 495 (717)
T cd01382 482 LPQPSDQHFTSVVH 495 (717)
T ss_pred CCCCCHHHHHHHHH
Confidence 99999999998753
No 8
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=100.00 E-value=6.8e-35 Score=239.74 Aligned_cols=93 Identities=47% Similarity=0.800 Sum_probs=90.5
Q ss_pred cccccccCCCC-CchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhh
Q psy15574 9 YHYYLSNERSG-PNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQA 87 (105)
Q Consensus 9 ~~fGFe~~~~~-NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec 87 (105)
||||||+|+ . ||||||||||||||||++|++++|..++++|.+|||.|..++|.||++|++||++||.|||++|||||
T Consensus 382 DI~GFE~f~-~~NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~f~dN~~~ldLie~k~~Gil~lLdee~ 460 (692)
T cd01385 382 DIFGFEDFG-RCNSFEQLCINYANEQLQYYFNQHIFKLEQEEYQGEGITWTNIEYTDNVGCIQLFSKKPTGLLYLLDEES 460 (692)
T ss_pred ecCccccCC-CCCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHh
Confidence 899999999 6 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcCcccccccC
Q psy15574 88 KVNLAQGTRNNHCKD 102 (105)
Q Consensus 88 ~~p~~td~~~~~~~~ 102 (105)
++|++||++|+.|+.
T Consensus 461 ~~p~~td~~~l~kl~ 475 (692)
T cd01385 461 NFPHATSQTLLAKFN 475 (692)
T ss_pred cCCCCCHHHHHHHHH
Confidence 999999999998753
No 9
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=100.00 E-value=1.1e-34 Score=238.03 Aligned_cols=93 Identities=35% Similarity=0.596 Sum_probs=90.8
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhc-CCCcccccchHhh
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVLDDQA 87 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~-~p~GllslLDeec 87 (105)
||||||+|. .||||||||||||||||++|++++|..++++|.+|||+|..++|.||++|+|||++ +|.|||++|||||
T Consensus 372 DIfGFE~f~-~NsfEQLcINyaNEkLQ~~f~~~~F~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~~~~~Gil~lLdee~ 450 (674)
T cd01378 372 DIYGFEIFQ-KNSFEQFCINYVNEKLQQIFIELTLKAEQEEYVREGIKWTPIEYFNNKIVCDLIEGKRPPGIFSILDDVC 450 (674)
T ss_pred ecccccccc-cccHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCcCChHHHHHHHhcCCCcchHHHHHHHH
Confidence 899999999 99999999999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred ccc-CCcCcccccccC
Q psy15574 88 KVN-LAQGTRNNHCKD 102 (105)
Q Consensus 88 ~~p-~~td~~~~~~~~ 102 (105)
++| ++||++|++|+.
T Consensus 451 ~~p~~~tD~~~~~kl~ 466 (674)
T cd01378 451 ATPHEGTDQTFLEKLN 466 (674)
T ss_pred cCCCCCChHHHHHHHH
Confidence 999 999999998864
No 10
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=100.00 E-value=1e-34 Score=247.19 Aligned_cols=93 Identities=43% Similarity=0.727 Sum_probs=89.8
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhc-CCCcccccchHhh
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVLDDQA 87 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~-~p~GllslLDeec 87 (105)
||||||.|+ .||||||||||+||||||.|++++|+.+|++|.+|||.|.+|+|.||++|+|||++ .|.|||++|||||
T Consensus 434 DIyGFEiFE-kNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~ 512 (1463)
T COG5022 434 DIYGFEIFE-KNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEEC 512 (1463)
T ss_pred eecchhhhc-cCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchHhhhcHHh
Confidence 899999999 99999999999999999999999999999999999999999999999999999996 4789999999999
Q ss_pred cccCCcCcccccccC
Q psy15574 88 KVNLAQGTRNNHCKD 102 (105)
Q Consensus 88 ~~p~~td~~~~~~~~ 102 (105)
.+|.+||++|..|+.
T Consensus 513 ~~p~atd~s~~sKL~ 527 (1463)
T COG5022 513 VMPHATDESFTSKLA 527 (1463)
T ss_pred cCCCCCchHHHHHHH
Confidence 999999999998853
No 11
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=100.00 E-value=2.6e-34 Score=236.33 Aligned_cols=93 Identities=39% Similarity=0.589 Sum_probs=90.4
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceeccc-CCcHHHHHHhhcCCCcccccchHhh
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQA 87 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~-~dn~~~ldli~~~p~GllslLDeec 87 (105)
||||||+|+ .||||||||||||||||++|++++|+.++++|.+|||.|..++| .||++|++||+++|.|||++|||||
T Consensus 380 DIfGFE~f~-~NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~~~~dn~~~ldLie~~~~Gil~lLdee~ 458 (693)
T cd01377 380 DIAGFEIFD-FNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGLDLQPTIDLIEKNPMGILSLLDEEC 458 (693)
T ss_pred ecccccccC-CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCCcHHHHHHHhcCCCchHhhhhHHh
Confidence 899999999 99999999999999999999999999999999999999999999 5999999999999999999999999
Q ss_pred cccCCcCcccccccC
Q psy15574 88 KVNLAQGTRNNHCKD 102 (105)
Q Consensus 88 ~~p~~td~~~~~~~~ 102 (105)
++|++||++|++|+.
T Consensus 459 ~~~~~tD~~~~~kl~ 473 (693)
T cd01377 459 VFPKATDKTFVEKLY 473 (693)
T ss_pred cCCCCCHHHHHHHHH
Confidence 999999999998864
No 12
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=100.00 E-value=3.8e-34 Score=235.32 Aligned_cols=92 Identities=43% Similarity=0.709 Sum_probs=89.2
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|+ .||||||||||||||||++|++++|..++++|.+|||+|..++|.||++|+|||++ |.|||++|||||+
T Consensus 374 DI~GFE~f~-~NsfEQLcINyaNEkLQ~~f~~~iF~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~-~~Gil~lLdee~~ 451 (691)
T cd01380 374 DIYGFETFE-KNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGIEWTFIDFYDNQPCIDLIES-KLGILSLLDEECR 451 (691)
T ss_pred ecCcccccC-CCCHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCHHHHHHHhC-CCchHHHhHHhhc
Confidence 899999999 99999999999999999999999999999999999999999999999999999996 6899999999999
Q ss_pred ccCCcCcccccccC
Q psy15574 89 VNLAQGTRNNHCKD 102 (105)
Q Consensus 89 ~p~~td~~~~~~~~ 102 (105)
+|++||++|++|+.
T Consensus 452 ~p~~td~~f~~kl~ 465 (691)
T cd01380 452 LPKGSDESWAQKLY 465 (691)
T ss_pred CCCCChHHHHHHHH
Confidence 99999999998853
No 13
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=100.00 E-value=1.1e-33 Score=232.33 Aligned_cols=93 Identities=46% Similarity=0.764 Sum_probs=90.8
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|. .||||||||||||||||++|++++|..++++|.+|||.|..++|.||++|++||+++|.|||++|||||+
T Consensus 375 DifGFE~f~-~NsfEQLcINyaNEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dN~~~l~li~~~~~Gil~lLdee~~ 453 (677)
T smart00242 375 DIYGFEIFE-VNSFEQLCINYANEKLQQFFNQHVFKLEQEEYEREGIDWTFIDFFDNQDCIDLIEKKPPGILSLLDEECR 453 (677)
T ss_pred ecccccccc-cCCHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHcCCccHHHHHHHHhc
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcccccccC
Q psy15574 89 VNLAQGTRNNHCKD 102 (105)
Q Consensus 89 ~p~~td~~~~~~~~ 102 (105)
+|++||++|++|+.
T Consensus 454 ~~~~td~~~~~kl~ 467 (677)
T smart00242 454 FPKATDQTFLEKLN 467 (677)
T ss_pred CCCCCHHHHHHHHH
Confidence 99999999998854
No 14
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=99.97 E-value=5.9e-33 Score=227.95 Aligned_cols=93 Identities=44% Similarity=0.721 Sum_probs=91.1
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|+ .||||||||||||||||++|++++|..++++|.+|||.|..++|.||++|++||+++|.||+++|||||+
T Consensus 368 Di~GFE~f~-~NsfEQLcINy~NEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dn~~~ldli~~~~~Gi~~lLdee~~ 446 (679)
T cd00124 368 DIFGFEIFE-KNSFEQLCINYANEKLQQFFNQHVFKLEQEEYQEEGIDWESIDFTDNQEVIDLIEKKPGGLLSLLDEECL 446 (679)
T ss_pred eccccccCC-CCCHHHHhcccchHHHHHHHHHHHHHHHHHHHHhcCCCccCCcCCCCHHHHHHHhcCCCcHHHHHHHHhC
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcccccccC
Q psy15574 89 VNLAQGTRNNHCKD 102 (105)
Q Consensus 89 ~p~~td~~~~~~~~ 102 (105)
+|++||++|++|+.
T Consensus 447 ~~~~~d~~~~~kl~ 460 (679)
T cd00124 447 FPKGTDETFLEKLN 460 (679)
T ss_pred CCCCCHHHHHHHHH
Confidence 99999999998864
No 15
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=99.97 E-value=2.3e-32 Score=226.60 Aligned_cols=94 Identities=29% Similarity=0.362 Sum_probs=87.1
Q ss_pred cccccccCCC-----CCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceeccc-CCcHHHHHHhhcCC------
Q psy15574 9 YHYYLSNERS-----GPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKP------ 76 (105)
Q Consensus 9 ~~fGFe~~~~-----~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~-~dn~~~ldli~~~p------ 76 (105)
||||||+|+. .||||||||||||||||++|++++|..++++|.+|||+|+.+.+ .||.+|++||+++|
T Consensus 379 DIfGFE~f~~n~~~~~NsfEQLcINyaNEkLQq~f~~~vF~~Eq~eY~~EGI~~~~~~~~~dn~~~i~lid~~p~~~~~~ 458 (767)
T cd01386 379 DTPGFQNPASQGKDRAATFEELCHNYLQERLQLLFHHRTFVQPLERYAEEGVEVEFDLAEPSPGTTVALVDQAPQQVVVP 458 (767)
T ss_pred ecccccccccccccCCCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCchhhHHHhhccccccccc
Confidence 8999999982 48999999999999999999999999999999999999986555 79999999999865
Q ss_pred --------CcccccchHhhcccCCcCcccccccC
Q psy15574 77 --------NGLLCVLDDQAKVNLAQGTRNNHCKD 102 (105)
Q Consensus 77 --------~GllslLDeec~~p~~td~~~~~~~~ 102 (105)
.|||++|||||++|++||++|+.|+.
T Consensus 459 ~~~~~~~~~GIl~lLDEec~~p~~tD~~f~~kl~ 492 (767)
T cd01386 459 AGLRAEDARGLLWLLDEEALVPGSSDDTFLERLF 492 (767)
T ss_pred chhhccCCCchhhhhhHhhcCCCCcHHHHHHHHH
Confidence 59999999999999999999998863
No 16
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=99.97 E-value=9.8e-32 Score=220.47 Aligned_cols=92 Identities=46% Similarity=0.770 Sum_probs=83.2
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceeccc-CCcHHHHHHhhcCCCcccccchHhh
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQA 87 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~-~dn~~~ldli~~~p~GllslLDeec 87 (105)
||||||+|. .|+||||||||||||||++|++++|..++++|.+|||.|..++| .||.+|++||+++|.|||++|||||
T Consensus 370 Di~GFE~~~-~N~fEQLciNyanErLq~~f~~~~f~~e~~~y~~EgI~~~~i~~~~dn~~~ldLi~~~~~Gil~lLdee~ 448 (689)
T PF00063_consen 370 DIFGFENFS-VNSFEQLCINYANERLQQFFNQHIFKSEQEEYKEEGIDWPFIDFNPDNQPCLDLIEKKPKGILSLLDEEC 448 (689)
T ss_dssp EEE-B---S-SB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCS-GCGHHHHHHHHHHSSTTSHHHHHHHHC
T ss_pred Ccccccccc-ccccccceeeeccccccceeeeecccccccccccccccccccccccCchhhhhhhccccCCHHHHhhhhh
Confidence 899999998 99999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred cccCCcCccccccc
Q psy15574 88 KVNLAQGTRNNHCK 101 (105)
Q Consensus 88 ~~p~~td~~~~~~~ 101 (105)
++|+++|++|++++
T Consensus 449 ~~~~~sd~~fl~kl 462 (689)
T PF00063_consen 449 LLPRGSDESFLEKL 462 (689)
T ss_dssp TSTTS-HHHHHHHH
T ss_pred hcccchhhHHHHHH
Confidence 99999999999875
No 17
>KOG0164|consensus
Probab=99.96 E-value=7.2e-31 Score=213.42 Aligned_cols=93 Identities=35% Similarity=0.562 Sum_probs=89.8
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||.|. .||||||||||||||||++|++.+++.+|+||.+|||.|.+|+|.+|.-++||++.+..|||+||||||+
T Consensus 381 diygfeif~-~NSFEQfcINYCNEKLQQlFIel~LKqEQEEY~rEgI~W~~i~YFnN~iIcdLvE~~~~GIlailDe~Cl 459 (1001)
T KOG0164|consen 381 DIYGFEIFQ-DNSFEQFCINYCNEKLQQLFIELVLKQEQEEYEREGIEWTHIDYFNNKIICDLVEQPHKGILAILDEACL 459 (1001)
T ss_pred EeeeEEeec-CCcHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCCceehhhcCCceeeehhccCccchhhhhhHHhc
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-CcCcccccccC
Q psy15574 89 VNL-AQGTRNNHCKD 102 (105)
Q Consensus 89 ~p~-~td~~~~~~~~ 102 (105)
.|+ .||..|+.+++
T Consensus 460 ~~G~vtD~tfL~~l~ 474 (1001)
T KOG0164|consen 460 RPGTVTDETFLEKLN 474 (1001)
T ss_pred CCCccchHHHHHHHH
Confidence 984 89999998753
No 18
>KOG0161|consensus
Probab=99.95 E-value=1.8e-29 Score=221.37 Aligned_cols=92 Identities=41% Similarity=0.620 Sum_probs=88.9
Q ss_pred ccccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceeccc-CCcHHHHHHhhcCCCcccccchHh
Q psy15574 8 EYHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQ 86 (105)
Q Consensus 8 ~~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~-~dn~~~ldli~~~p~GllslLDee 86 (105)
-||-|||+|. .||||||||||+||+||++|++++|..++++|.+|||.|.+|+| .|-+||++||+ +|+||+|+||||
T Consensus 453 LDiaGFEIfe-~nSFEQLciNytnEkLQqfFnh~mFvlEqeeY~~EgIew~fidfG~Dlq~~idLIE-kp~Gi~slLdEE 530 (1930)
T KOG0161|consen 453 LDIAGFEIFE-FNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWDFIDFGLDLQPTIDLIE-KPMGILSLLDEE 530 (1930)
T ss_pred eeeccccccC-cCCHHHHHHHHHHHHHHhhhcchhhhhhHHHHHHhCCceeeeccccchhhhHHHHh-chhhHHHHHHHH
Confidence 5899999999 99999999999999999999999999999999999999999999 89999999999 578999999999
Q ss_pred hcccCCcCccccccc
Q psy15574 87 AKVNLAQGTRNNHCK 101 (105)
Q Consensus 87 c~~p~~td~~~~~~~ 101 (105)
|++|++||.+|+.|+
T Consensus 531 c~~PkAtd~tf~~kL 545 (1930)
T KOG0161|consen 531 CVVPKATDKTFLEKL 545 (1930)
T ss_pred HhcCCCccchHHHHH
Confidence 999999999999874
No 19
>KOG0163|consensus
Probab=99.93 E-value=5.9e-27 Score=191.78 Aligned_cols=92 Identities=38% Similarity=0.584 Sum_probs=88.8
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
|+=|||-|. +|||||||||||||+||++|++++++.+|+.|.+||+.++.|.|.||++|++||+.|..|||.|||||.+
T Consensus 457 DiAGFEyf~-~NSFEQFCINyCNEKLQ~FFNerILkeEQElYekEGLnv~ei~f~DNqDcIeL~E~K~~GifdlLDEEak 535 (1259)
T KOG0163|consen 457 DIAGFEYFA-VNSFEQFCINYCNEKLQKFFNERILKEEQELYEKEGLNVPEIEFTDNQDCIELIEAKSNGIFDLLDEEAK 535 (1259)
T ss_pred eeccceeee-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEeccchhHHHHHHHhccchhhhhhhhcc
Confidence 788999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCccccccc
Q psy15574 89 VNLAQGTRNNHCK 101 (105)
Q Consensus 89 ~p~~td~~~~~~~ 101 (105)
+|+++++.|..+.
T Consensus 536 lP~~s~qhFT~~v 548 (1259)
T KOG0163|consen 536 LPKPSYQHFTARV 548 (1259)
T ss_pred CCCcchHHHHHHH
Confidence 9999999987553
No 20
>KOG0160|consensus
Probab=99.93 E-value=9.7e-27 Score=193.44 Aligned_cols=92 Identities=46% Similarity=0.705 Sum_probs=89.5
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||.|+ .|+||||||||+||+||+.|++|+|+.++++|..|+|+|..++|.||++|+++|+. |.|++++|||+|+
T Consensus 374 DiYgFEsF~-~nsfeQfcINyanEkLqq~fnqHvfk~Eqeey~~e~i~Ws~ief~dNq~~~~lie~-~~Gi~~Llde~c~ 451 (862)
T KOG0160|consen 374 DIYGFESFE-VNSFEQFCINYANEKLQQQFNQHVFKLEQEEYTKEEIDWSGIEFRDNQECLDLIEK-PLGILALLDEECM 451 (862)
T ss_pred hcccccccc-cCcHHHhhhhhHHHHhhHHHHHHHHHHHHHHHHhhccccccccCcCccchhhhhcc-ccchhhccchhcc
Confidence 899999999 99999999999999999999999999999999999999999999999999999996 9999999999999
Q ss_pred ccCCcCcccccccC
Q psy15574 89 VNLAQGTRNNHCKD 102 (105)
Q Consensus 89 ~p~~td~~~~~~~~ 102 (105)
+|+++|+++..|+.
T Consensus 452 lp~~t~~~~a~KL~ 465 (862)
T KOG0160|consen 452 LPKGTDETLAQKLY 465 (862)
T ss_pred CCCCCcchHHHHHH
Confidence 99999999998853
No 21
>KOG0162|consensus
Probab=99.92 E-value=3.4e-26 Score=186.79 Aligned_cols=93 Identities=32% Similarity=0.549 Sum_probs=85.8
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhc-CCCcccccchHhh
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVLDDQA 87 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~-~p~GllslLDeec 87 (105)
||||||.|. .|||||+||||.|||||+.|++.+++.+|++|.+|||.|.+|.|.||.-++|||+. +|.||+++|||.|
T Consensus 389 DIYGFEIFe-~N~FEQ~CINfVNEKLQQIFIeLTLKaEQEeYvrE~I~WTpIkYFnNKvVCDLIE~K~PPGims~ldD~~ 467 (1106)
T KOG0162|consen 389 DIYGFEIFE-NNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVREGIKWTPIKYFNNKVVCDLIENKRPPGIMSALDDVC 467 (1106)
T ss_pred Eeeeeeecc-cCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccccchhhcCCeeeeehhhccCCchHHHHHHHHH
Confidence 899999999 99999999999999999999999999999999999999999999999999999987 5889999999999
Q ss_pred ccc----CCcCcccccccC
Q psy15574 88 KVN----LAQGTRNNHCKD 102 (105)
Q Consensus 88 ~~p----~~td~~~~~~~~ 102 (105)
... .+-|..|++++.
T Consensus 468 At~Ha~~~~aDqa~~qrLn 486 (1106)
T KOG0162|consen 468 ATAHADSEGADQALLQRLN 486 (1106)
T ss_pred HHhccccchhHHHHHHHHH
Confidence 875 456677776643
No 22
>KOG4229|consensus
Probab=99.91 E-value=2.6e-25 Score=188.30 Aligned_cols=97 Identities=43% Similarity=0.692 Sum_probs=93.2
Q ss_pred hccccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHh
Q psy15574 7 SEYHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQ 86 (105)
Q Consensus 7 ~~~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDee 86 (105)
..||||||+|. .|+|||+|||||||++|.+|++++|..++++|..|+|.|..+.|.||..|+++|..+|+||+.+||||
T Consensus 431 iLdiFgfE~f~-~nsfEq~~in~Ane~lQ~~fnqhIf~~Eq~ey~~e~I~w~~i~~~dN~~~ldli~~kp~gil~liDee 509 (1062)
T KOG4229|consen 431 ILDIFGFENFE-RNSFEQLCINLANEQLQYYFNQHIFALEQEEYDNESIDWRNIEFADNRRRLDLISPKPMGILSLIDEE 509 (1062)
T ss_pred hhhhhcccchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhcCCCeeeeeeeeccchhhhhccCccchhheeccc
Confidence 36999999996 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCcCcccccccCCC
Q psy15574 87 AKVNLAQGTRNNHCKDPN 104 (105)
Q Consensus 87 c~~p~~td~~~~~~~~~~ 104 (105)
+.+|++||.+++.|+..|
T Consensus 510 s~fP~~td~tl~~k~~~q 527 (1062)
T KOG4229|consen 510 SRFPKATDQTLLLKLNMQ 527 (1062)
T ss_pred CcCCchHHHHHHHHhhhh
Confidence 999999999999987653
No 23
>KOG1830|consensus
Probab=20.04 E-value=41 Score=27.54 Aligned_cols=30 Identities=17% Similarity=0.072 Sum_probs=19.4
Q ss_pred hccccccccCCCCCchhhHHHhhhhHHHHHHH
Q psy15574 7 SEYHYYLSNERSGPNFEQLCINYANEHLQYYF 38 (105)
Q Consensus 7 ~~~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~ 38 (105)
+||||| |-|.+.|.| ..-.|-..||+..+-
T Consensus 48 AEdIFG-ELf~da~~f-~~R~NSLQ~RIDRL~ 77 (518)
T KOG1830|consen 48 AEDIFG-ELFNDANNF-NHRANSLQERIDRLA 77 (518)
T ss_pred HHHHHH-HHHHHhhhh-hhhhhHHHHHHHHHh
Confidence 589999 666656655 345566666665554
Done!