Query psy15574
Match_columns 105
No_of_seqs 115 out of 1048
Neff 7.1
Searched_HMMs 29240
Date Sat Aug 17 00:47:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15574.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15574hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2v26_A Myosin VI; calmodulin-b 100.0 1.9E-36 6.6E-41 250.3 5.7 92 9-101 452-543 (784)
2 1lkx_A Myosin IE heavy chain; 100.0 1.7E-36 5.9E-41 248.1 4.9 93 9-102 386-478 (697)
3 1w7j_A Myosin VA; motor protei 100.0 1E-35 3.6E-40 246.2 6.0 91 9-101 437-527 (795)
4 4anj_A Unconventional myosin-V 100.0 7.7E-36 2.6E-40 252.2 4.9 93 9-102 456-548 (1052)
5 1w9i_A Myosin II heavy chain; 100.0 2.2E-35 7.5E-40 243.5 5.8 92 9-101 454-547 (770)
6 4db1_A Myosin-7; S1DC, cardiac 100.0 1.5E-35 5.1E-40 244.9 4.7 91 9-101 461-552 (783)
7 1kk8_A Myosin heavy chain, str 100.0 4.4E-35 1.5E-39 243.5 4.3 91 9-101 460-551 (837)
8 2dfs_A Myosin-5A; myosin-V, in 100.0 7.5E-35 2.6E-39 247.0 5.2 91 9-101 437-527 (1080)
9 2ycu_A Non muscle myosin 2C, a 100.0 1.4E-34 4.9E-39 243.8 5.3 92 9-101 433-527 (995)
10 1g8x_A Myosin II heavy chain f 100.0 3.3E-34 1.1E-38 241.8 5.8 93 9-102 454-548 (1010)
11 1i84_S Smooth muscle myosin he 100.0 4E-34 1.4E-38 243.8 4.7 93 9-102 464-559 (1184)
12 1y4m_A HERV-FRD_6P24.1 proviru 31.1 12 0.0004 20.8 0.2 26 64-89 25-50 (53)
13 1mof_A Moloney murine leukemia 25.8 15 0.0005 20.6 0.0 26 64-89 27-52 (55)
No 1
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=100.00 E-value=1.9e-36 Score=250.30 Aligned_cols=92 Identities=32% Similarity=0.557 Sum_probs=90.4
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|+ .||||||||||||||||++|++++|+.++++|.+|||+|..++|.||++|+|||+++|+|||+||||||+
T Consensus 452 DI~GFE~f~-~NsFEQlcINyaNEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~DN~~~idLie~kp~GIlslLDEe~~ 530 (784)
T 2v26_A 452 DIAGFEYFE-HNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENR 530 (784)
T ss_dssp ECCCCCCCS-SCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHH
T ss_pred ccCCcccCC-cCCHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCCcccccccChHHHHHHHhhccccHHHHHHHHhc
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCccccccc
Q psy15574 89 VNLAQGTRNNHCK 101 (105)
Q Consensus 89 ~p~~td~~~~~~~ 101 (105)
+|++||++|++|+
T Consensus 531 ~p~~tD~~f~~kl 543 (784)
T 2v26_A 531 LPQPSDQHFTSAV 543 (784)
T ss_dssp SSSCCHHHHHHHH
T ss_pred CCCCChHHHHHHH
Confidence 9999999999875
No 2
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=100.00 E-value=1.7e-36 Score=248.13 Aligned_cols=93 Identities=34% Similarity=0.520 Sum_probs=90.8
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|+ .||||||||||||||||++|++++|+.++++|.+|||+|..++|.||++|+|||+++|.|||+||||||+
T Consensus 386 DI~GFE~f~-~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dN~~~idLie~kp~GilslLDEec~ 464 (697)
T 1lkx_A 386 DIYGFEVFQ-NNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACL 464 (697)
T ss_dssp ECCCCCCCS-SBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHTTSSSSSHHHHHHHHHH
T ss_pred ccccccccC-cCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCHHHHHHHhcccCChhhhhHHhhC
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcccccccC
Q psy15574 89 VNLAQGTRNNHCKD 102 (105)
Q Consensus 89 ~p~~td~~~~~~~~ 102 (105)
+|++||++|++|+.
T Consensus 465 ~p~~tD~~f~~kl~ 478 (697)
T 1lkx_A 465 IAKSTDQTFLDSIC 478 (697)
T ss_dssp STTCCHHHHHHHHH
T ss_pred CCCCChHHHHHHHH
Confidence 99999999998853
No 3
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=100.00 E-value=1e-35 Score=246.19 Aligned_cols=91 Identities=44% Similarity=0.667 Sum_probs=89.0
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|+ .||||||||||||||||++|++++|+.++++|.+|||+|..++|.||++|+|||+++ .|||+||||||+
T Consensus 437 DI~GFE~f~-~NsFEQlcINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~DN~~~idLie~~-~GIlslLDEec~ 514 (795)
T 1w7j_A 437 DIYGFETFE-INSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECK 514 (795)
T ss_dssp ECCCCCCCS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCCCHHHHHHHHST-TSHHHHHHHHHT
T ss_pred ccCcccccC-cCCHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCcccccCccccHHHHHHHHhc-CCHHHhhhhhcc
Confidence 899999999 999999999999999999999999999999999999999999999999999999986 999999999999
Q ss_pred ccCCcCccccccc
Q psy15574 89 VNLAQGTRNNHCK 101 (105)
Q Consensus 89 ~p~~td~~~~~~~ 101 (105)
+|++||++|++|+
T Consensus 515 ~p~~tD~~f~~kl 527 (795)
T 1w7j_A 515 MPKGSDDTWAQKL 527 (795)
T ss_dssp STTCCHHHHHHHH
T ss_pred CCCCChHHHHHHH
Confidence 9999999999885
No 4
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=100.00 E-value=7.7e-36 Score=252.20 Aligned_cols=93 Identities=31% Similarity=0.553 Sum_probs=90.9
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|+ .||||||||||||||||++|++++|+.++++|.+|||+|..++|.||++|+|||+++|+|||++|||||+
T Consensus 456 DI~GFE~f~-~NsFEQLCINyaNEkLQq~Fn~~vF~~EqeeY~~EgI~w~~I~f~DN~~~idLie~kp~GIl~lLDEe~~ 534 (1052)
T 4anj_A 456 DIAGFEYFE-HNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENR 534 (1052)
T ss_dssp ECCCCCCCS-SCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHH
T ss_pred ecCCCcccc-cCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCcccCCcCCcHHHHHHHHcCcccHHHHHHHHhc
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcccccccC
Q psy15574 89 VNLAQGTRNNHCKD 102 (105)
Q Consensus 89 ~p~~td~~~~~~~~ 102 (105)
+|++||++|++|+.
T Consensus 535 ~p~~tD~~f~~kl~ 548 (1052)
T 4anj_A 535 LPQPSDQHFTSAVH 548 (1052)
T ss_dssp SSSCCHHHHHHHHH
T ss_pred CCCCcHHHHHHHHH
Confidence 99999999998753
No 5
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=100.00 E-value=2.2e-35 Score=243.49 Aligned_cols=92 Identities=41% Similarity=0.686 Sum_probs=89.1
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceeccc-CCcHHHHHHhhcC-CCcccccchHh
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK-PNGLLCVLDDQ 86 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~-~dn~~~ldli~~~-p~GllslLDee 86 (105)
||||||+|+ .||||||||||||||||++|++++|+.++++|.+|||+|..++| .||++|+|||+++ |+|||+|||||
T Consensus 454 DI~GFE~F~-~NsFEQlCINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek~~p~GilslLDEe 532 (770)
T 1w9i_A 454 DIYGFEIFK-VNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQ 532 (770)
T ss_dssp ECCCCCCCS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGGGHHHHHHHHCTTTTCHHHHHHHH
T ss_pred cCccccccc-cCCHHHHHHHhhHHHHHHHHHhhhhHHHHHHhhccCCCceeeccccCcHHHHHHHhCCCCCchhhhhhhh
Confidence 899999999 99999999999999999999999999999999999999999999 5999999999984 99999999999
Q ss_pred hcccCCcCccccccc
Q psy15574 87 AKVNLAQGTRNNHCK 101 (105)
Q Consensus 87 c~~p~~td~~~~~~~ 101 (105)
|++|++||++|++|+
T Consensus 533 c~~p~~tD~~f~~kL 547 (770)
T 1w9i_A 533 SVFPNATDNTLITKL 547 (770)
T ss_dssp HSSSSCCHHHHHHHH
T ss_pred hCCCCCChHHHHHHH
Confidence 999999999999883
No 6
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=100.00 E-value=1.5e-35 Score=244.89 Aligned_cols=91 Identities=38% Similarity=0.650 Sum_probs=87.6
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceeccc-CCcHHHHHHhhcCCCcccccchHhh
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQA 87 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~-~dn~~~ldli~~~p~GllslLDeec 87 (105)
||||||+|+ .||||||||||||||||++|++++|+.++++|.+|||+|..++| .||++|+|||++ |+|||+||||||
T Consensus 461 DI~GFE~f~-~NsFEQlCINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~~Dn~~~idLiek-p~Gil~lLDEec 538 (783)
T 4db1_A 461 DIAGFEIFD-FNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEK-PMGIMSILEEEC 538 (783)
T ss_dssp ECCCCCCCS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCGGGGGHHHHHHHHS-TTSHHHHHCC-T
T ss_pred ccccccccc-cCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCCcccccccCChHHHHHHHhC-CCchHhhhhHHh
Confidence 899999999 99999999999999999999999999999999999999999999 699999999995 899999999999
Q ss_pred cccCCcCccccccc
Q psy15574 88 KVNLAQGTRNNHCK 101 (105)
Q Consensus 88 ~~p~~td~~~~~~~ 101 (105)
++|++||++|++|+
T Consensus 539 ~~p~~tD~tf~~kl 552 (783)
T 4db1_A 539 MFPKATDMTFKAKL 552 (783)
T ss_dssp TCTTCCHHHHHHHH
T ss_pred cCCCCCHHHHHHHH
Confidence 99999999999886
No 7
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=100.00 E-value=4.4e-35 Score=243.45 Aligned_cols=91 Identities=41% Similarity=0.686 Sum_probs=88.4
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceeccc-CCcHHHHHHhhcCCCcccccchHhh
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQA 87 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~-~dn~~~ldli~~~p~GllslLDeec 87 (105)
||||||+|+ .||||||||||||||||++|++++|+.++++|.+|||+|..++| .||++|+|||++ |.|||+||||||
T Consensus 460 DI~GFE~f~-~NsFEQlcINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek-p~GIlslLDEec 537 (837)
T 1kk8_A 460 DIAGFEIFD-FNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSILEEEC 537 (837)
T ss_dssp ECCCCCCCS-SBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCCCCHHHHHHHHHHHS-TTSHHHHHHHHT
T ss_pred ecCCccccc-cccHHHHHHHHhhHHHHHHHHHhhhHHHHHHhhhcCCceeecccccCHHHHHHHHhc-CCcHHHHHHHHh
Confidence 899999999 99999999999999999999999999999999999999999999 599999999996 899999999999
Q ss_pred cccCCcCccccccc
Q psy15574 88 KVNLAQGTRNNHCK 101 (105)
Q Consensus 88 ~~p~~td~~~~~~~ 101 (105)
++|++||++|++|+
T Consensus 538 ~~p~~tD~tf~~kl 551 (837)
T 1kk8_A 538 MFPKADDKSFQDKL 551 (837)
T ss_dssp TCTTCCHHHHHHHH
T ss_pred cCCCCChHHHHHHH
Confidence 99999999999883
No 8
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=100.00 E-value=7.5e-35 Score=246.98 Aligned_cols=91 Identities=44% Similarity=0.667 Sum_probs=88.9
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceecccCCcHHHHHHhhcCCCcccccchHhhc
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAK 88 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~~dn~~~ldli~~~p~GllslLDeec~ 88 (105)
||||||+|+ .|||||||||||||+||++|++++|+.++++|.+|||+|..++|.||++|+|||+++ +|||+||||||+
T Consensus 437 DI~GFE~f~-~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dn~~~idlie~~-~Gil~lLdee~~ 514 (1080)
T 2dfs_A 437 DIYGFETFE-INSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECK 514 (1080)
T ss_dssp EECCCCCCS-SBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCCCCCHHHHHHHHST-TSHHHHHHHHTT
T ss_pred ccCCccccC-cCCHHHHHHHhhhHHHHHHHHHHhhHHHHHHHhhcCCccccccccccHHHHHHHhcC-Cceeeecccccc
Confidence 899999999 999999999999999999999999999999999999999999999999999999976 899999999999
Q ss_pred ccCCcCccccccc
Q psy15574 89 VNLAQGTRNNHCK 101 (105)
Q Consensus 89 ~p~~td~~~~~~~ 101 (105)
+|++||++|+.|+
T Consensus 515 ~p~~tD~~f~~kl 527 (1080)
T 2dfs_A 515 MPKGSDDTWAQKL 527 (1080)
T ss_dssp STTCCHHHHHHHH
T ss_pred CCCCChHHHHHHH
Confidence 9999999999885
No 9
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=100.00 E-value=1.4e-34 Score=243.77 Aligned_cols=92 Identities=39% Similarity=0.614 Sum_probs=89.2
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceeccc-CCcHHHHHHhhc--CCCcccccchH
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG--KPNGLLCVLDD 85 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~-~dn~~~ldli~~--~p~GllslLDe 85 (105)
||||||+|+ .||||||||||||||||++|++++|+.++++|.+|||+|..++| .||++|+|||++ +|+|||+||||
T Consensus 433 DI~GFE~f~-~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~p~Gil~lLde 511 (995)
T 2ycu_A 433 DIAGFEIFQ-LNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDE 511 (995)
T ss_dssp ECCCBCCCS-SBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHHHHCCSSSCCHHHHHHH
T ss_pred ccccccccc-cchHHHHHHHhhHHHHHHHHHHhhhHHHHHHHhccCCCccccccccChHHHHHHHhccCCCCchhhhhHH
Confidence 899999999 99999999999999999999999999999999999999999999 699999999997 48999999999
Q ss_pred hhcccCCcCccccccc
Q psy15574 86 QAKVNLAQGTRNNHCK 101 (105)
Q Consensus 86 ec~~p~~td~~~~~~~ 101 (105)
||++|++||++|++|+
T Consensus 512 e~~~p~~tD~~f~~kl 527 (995)
T 2ycu_A 512 ECWFPKATDKSFVEKV 527 (995)
T ss_dssp SSSSTTCCHHHHHHHH
T ss_pred HhcCCCCchHHHHHHH
Confidence 9999999999999884
No 10
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=100.00 E-value=3.3e-34 Score=241.79 Aligned_cols=93 Identities=40% Similarity=0.637 Sum_probs=89.6
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceeccc-CCcHHHHHHhhc-CCCcccccchHh
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG-KPNGLLCVLDDQ 86 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~-~dn~~~ldli~~-~p~GllslLDee 86 (105)
||||||+|+ .||||||||||||||||++|++++|+.++++|.+|||+|..++| .||++|+|||++ +|+|||+|||||
T Consensus 454 DI~GFE~f~-~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~~Gil~lLdee 532 (1010)
T 1g8x_A 454 DISGFEIFK-VNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQ 532 (1010)
T ss_dssp ECCCCCCCS-SBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCSHHHHHHHHCTTTTCHHHHHHHH
T ss_pred cCcccccCC-cCcHHHHHHHhhhHHHHHHHHHHhhHHHHHHhhccCCCccccccccChHHHHHHHhcCCCCeeehhhhHH
Confidence 899999999 99999999999999999999999999999999999999999999 599999999998 499999999999
Q ss_pred hcccCCcCcccccccC
Q psy15574 87 AKVNLAQGTRNNHCKD 102 (105)
Q Consensus 87 c~~p~~td~~~~~~~~ 102 (105)
|++|++||++|+.|+.
T Consensus 533 ~~~p~~td~~f~~kl~ 548 (1010)
T 1g8x_A 533 SVFPNATDNTLITKLH 548 (1010)
T ss_dssp TTSSSCCHHHHHHHHH
T ss_pred hCCCCCChHHHHHHHH
Confidence 9999999999998843
No 11
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=100.00 E-value=4e-34 Score=243.77 Aligned_cols=93 Identities=40% Similarity=0.596 Sum_probs=88.3
Q ss_pred cccccccCCCCCchhhHHHhhhhHHHHHHHHHhhhhhhHhhhhhcCCcceeccc-CCcHHHHHHhhcC--CCcccccchH
Q psy15574 9 YHYYLSNERSGPNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK--PNGLLCVLDD 85 (105)
Q Consensus 9 ~~fGFe~~~~~NsfeqlciN~~nE~Lq~~~~~~~f~~~~~ey~~Egi~~~~i~~-~dn~~~ldli~~~--p~GllslLDe 85 (105)
||||||+|. .|||||||||||||+||++|++++|..++++|.+|||+|..++| .||++|+|||++| |+|||+||||
T Consensus 464 Di~GFE~f~-~NsfeQlciNy~nEkLq~~f~~~~f~~eq~ey~~Egi~~~~i~~~~dn~~~~~lie~~~~~~Gil~lLde 542 (1184)
T 1i84_S 464 DIAGFEIFE-INSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDE 542 (1184)
T ss_dssp ECCCCCCCS-SBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSCCCCCCCCCCHHHHHTTSCCSSSCCHHHHHHH
T ss_pred ecCCcCCCC-cchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCccccccCCCcHHHHHHHhCCCCCCCchhhhhh
Confidence 899999999 99999999999999999999999999999999999999999999 6999999999962 3499999999
Q ss_pred hhcccCCcCcccccccC
Q psy15574 86 QAKVNLAQGTRNNHCKD 102 (105)
Q Consensus 86 ec~~p~~td~~~~~~~~ 102 (105)
||++|++||.+|+.|+.
T Consensus 543 e~~~p~~td~~~~~kl~ 559 (1184)
T 1i84_S 543 ECWFPKATDTSFVEKLI 559 (1184)
T ss_dssp TTSCTTCCHHHHHHHHH
T ss_pred hhCCCCCChHHHHHHHH
Confidence 99999999999998853
No 12
>1y4m_A HERV-FRD_6P24.1 provirus ancestral ENV polyprotei; coat protein, membrane fusion, endogenous retrovirus, membra protein; 1.60A {Homo sapiens} SCOP: h.3.2.1
Probab=31.06 E-value=12 Score=20.84 Aligned_cols=26 Identities=19% Similarity=0.350 Sum_probs=22.2
Q ss_pred CcHHHHHHhhcCCCcccccchHhhcc
Q psy15574 64 DNTLCLQLVEGKPNGLLCVLDDQAKV 89 (105)
Q Consensus 64 dn~~~ldli~~~p~GllslLDeec~~ 89 (105)
.|...+|++..+..|+=..|.|+|-+
T Consensus 25 QNRraLDlL~a~~GG~C~~l~e~CC~ 50 (53)
T 1y4m_A 25 QNRRGLDMLTAAQGGICLALDEKCCF 50 (53)
T ss_dssp HHHHHHHHHTGGGTSHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHhCCccHHhcCchhc
Confidence 57788999988888999999998876
No 13
>1mof_A Moloney murine leukemia virus P15; glycoprotein, coat protein, polyprotein, transmembrane, SIGN protein; 1.70A {Moloney murine leukemia virus} SCOP: h.3.2.1
Probab=25.78 E-value=15 Score=20.57 Aligned_cols=26 Identities=27% Similarity=0.317 Sum_probs=22.2
Q ss_pred CcHHHHHHhhcCCCcccccchHhhcc
Q psy15574 64 DNTLCLQLVEGKPNGLLCVLDDQAKV 89 (105)
Q Consensus 64 dn~~~ldli~~~p~GllslLDeec~~ 89 (105)
.|...+|++..+..|+=..|.|+|-+
T Consensus 27 QNRraLD~L~a~~GG~C~~l~e~CCf 52 (55)
T 1mof_A 27 QNRRGLDLLFLKEGGLCAALKEECAF 52 (55)
T ss_dssp HHHHHHHHHTGGGTCHHHHHTSCCCC
T ss_pred HHHHHHHHHHHHhCCccHHHcCchhc
Confidence 57788999988888998999998876
Done!