BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15576
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P13804|ETFA_HUMAN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Homo
sapiens GN=ETFA PE=1 SV=1
Length = 333
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>sp|Q2KJE4|ETFA_BOVIN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Bos
taurus GN=ETFA PE=2 SV=1
Length = 333
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTELL 330
>sp|Q99LC5|ETFA_MOUSE Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus
musculus GN=Etfa PE=1 SV=2
Length = 333
Score = 114 bits (284), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>sp|P13803|ETFA_RAT Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Rattus norvegicus GN=Etfa PE=1 SV=4
Length = 333
Score = 114 bits (284), Expect = 3e-25, Method: Composition-based stats.
Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>sp|Q5RC31|ETFA_PONAB Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Pongo abelii GN=ETFA PE=2 SV=1
Length = 333
Score = 113 bits (282), Expect = 4e-25, Method: Composition-based stats.
Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>sp|Q8HXY0|ETFA_MACFA Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Macaca fascicularis GN=ETFA PE=2 SV=1
Length = 333
Score = 113 bits (282), Expect = 4e-25, Method: Composition-based stats.
Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>sp|Q93615|ETFA_CAEEL Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=F27D4.1 PE=3
SV=2
Length = 332
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/59 (86%), Positives = 54/59 (91%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELYIA+GISGAIQHLAGMKDSK IVAINKDP+APIFQV+D GL ADLFKAVPELT L
Sbjct: 273 PELYIAIGISGAIQHLAGMKDSKVIVAINKDPDAPIFQVADIGLKADLFKAVPELTAAL 331
>sp|Q54FD7|ETFA_DICDI Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=etfa PE=3 SV=1
Length = 355
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 53/59 (89%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELYIAVGISGAIQHLAGMKDSK IVAINKDPEAPIFQV+D GLV DLF VP+LTE +
Sbjct: 293 PELYIAVGISGAIQHLAGMKDSKVIVAINKDPEAPIFQVADVGLVGDLFNEVPKLTESI 351
>sp|P38974|ETFA_PARDE Electron transfer flavoprotein subunit alpha OS=Paracoccus
denitrificans GN=etfA PE=1 SV=2
Length = 308
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 53/59 (89%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELY+AVGISGAIQHLAGMKDSK IVAINKD EAPIFQ++DYGLV DLF VPELT KL
Sbjct: 250 PELYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQIADYGLVGDLFSVVPELTGKL 308
>sp|P53573|ETFA_BRAJA Electron transfer flavoprotein subunit alpha OS=Bradyrhizobium
japonicum (strain USDA 110) GN=etfA PE=3 SV=2
Length = 314
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELY+AVGISGAIQHLAGMKDSK IVAINKD +APIFQV+DYGLVADL++AVPELT +L
Sbjct: 251 PELYVAVGISGAIQHLAGMKDSKVIVAINKDEDAPIFQVADYGLVADLYQAVPELTAEL 309
>sp|Q9HZP7|ETFA_PSEAE Electron transfer flavoprotein subunit alpha OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=etfA PE=3 SV=1
Length = 309
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 54/59 (91%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
P+LYIAVGISGAIQHLAGMKDSK IVAINKD EAPIFQV+DYGLVADLF AVPEL + +
Sbjct: 251 PQLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFDAVPELEKAV 309
>sp|Q8J112|ETFA_CRYNV Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus neoformans var. grubii
GN=ETF1 PE=3 SV=1
Length = 346
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 56/59 (94%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELY+AVGISGAIQHLAGMK+SK IVAINKDP+APIFQV+D GLVADLF++VP+L +++
Sbjct: 283 PELYVAVGISGAIQHLAGMKESKMIVAINKDPDAPIFQVADVGLVADLFESVPQLVQEI 341
>sp|Q5Y223|ETFA_CRYGW Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus gattii serotype B (strain
WM276 / ATCC MYA-4071) GN=ETF1 PE=3 SV=1
Length = 346
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 56/59 (94%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELY+A+GISGAIQHLAGMK+SK I+AINKDP+APIFQV+D GLVADLF++VP+L ++L
Sbjct: 283 PELYVAIGISGAIQHLAGMKESKMIIAINKDPDAPIFQVADVGLVADLFESVPQLVKEL 341
>sp|Q12480|ETFA_YEAST Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=AIM45 PE=1 SV=1
Length = 344
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 52/59 (88%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
P LYIA+G+SGA+QHLAGMKDSK IVAIN DP+APIF V+DYGL DL+K VPELTEKL
Sbjct: 282 PNLYIAIGVSGAVQHLAGMKDSKVIVAINNDPDAPIFNVADYGLQGDLYKIVPELTEKL 340
>sp|P0CN60|ETFA_CRYNJ Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=ETF1 PE=3
SV=1
Length = 346
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 56/59 (94%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELY+A+GISGAIQHLAGMK+SK I+AINKDP+APIFQV+D GLVADLF++VP+L +++
Sbjct: 283 PELYVAIGISGAIQHLAGMKESKMIIAINKDPDAPIFQVADVGLVADLFESVPQLVKEI 341
>sp|P0CN61|ETFA_CRYNB Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=ETF1 PE=3 SV=1
Length = 346
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 56/59 (94%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELY+A+GISGAIQHLAGMK+SK I+AINKDP+APIFQV+D GLVADLF++VP+L +++
Sbjct: 283 PELYVAIGISGAIQHLAGMKESKMIIAINKDPDAPIFQVADVGLVADLFESVPQLVKEI 341
>sp|Q9C6I6|ETFA_ARATH Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Arabidopsis thaliana GN=ETFA PE=1 SV=1
Length = 363
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 53/59 (89%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELY+A G+SGAIQHLAG+KDSK IVA+NKD +APIFQV+DYGLV DLF+ +PEL EKL
Sbjct: 301 PELYMAFGVSGAIQHLAGIKDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKL 359
>sp|O53275|ETFA_MYCTU Electron transfer flavoprotein subunit alpha OS=Mycobacterium
tuberculosis GN=etfA PE=3 SV=1
Length = 318
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 52/59 (88%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
P+LYIA+GISGAIQH AGM+ SKTIVA+NKD EAPIF+++DYG+V DLFK P+LTE +
Sbjct: 255 PQLYIALGISGAIQHRAGMQTSKTIVAVNKDEEAPIFEIADYGVVGDLFKVAPQLTEAI 313
>sp|P78790|ETFA_SCHPO Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC27D7.06 PE=2 SV=3
Length = 341
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 51/61 (83%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
+ P+LYIAVGI GAIQHLAG+KDSK I AIN+D APIFQ +D G+V DLF+ VPELTEK
Sbjct: 281 IAPKLYIAVGIDGAIQHLAGIKDSKVIAAINRDENAPIFQTADVGIVGDLFEIVPELTEK 340
Query: 108 L 108
L
Sbjct: 341 L 341
>sp|Q75LJ3|ETFA_ORYSJ Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Oryza sativa subsp. japonica GN=ETFA PE=3 SV=1
Length = 358
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/59 (72%), Positives = 53/59 (89%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELY+A G+SGAIQHLAGM+DSK IVA+NKD +APIFQV+DYG+VADLF+ + EL +KL
Sbjct: 296 PELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGIVADLFEVLDELLKKL 354
>sp|A2XNR6|ETFA_ORYSI Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Oryza sativa subsp. indica GN=ETFA PE=3 SV=1
Length = 358
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/59 (72%), Positives = 53/59 (89%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
PELY+A G+SGAIQHLAGM+DSK IVA+NKD +APIFQV+DYG+VADLF+ + EL +KL
Sbjct: 296 PELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGIVADLFEVLDELLKKL 354
>sp|P94551|ETFA_BACSU Electron transfer flavoprotein subunit alpha OS=Bacillus subtilis
(strain 168) GN=etfA PE=3 SV=1
Length = 325
Score = 94.7 bits (234), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
+ P+LYIA GISGAIQHLAGM +SK IVAINKDPEA IF+++DYG+V DLF+ VP LTE+
Sbjct: 258 VTPDLYIACGISGAIQHLAGMSNSKVIVAINKDPEADIFKIADYGIVGDLFEVVPLLTEE 317
Query: 108 L 108
Sbjct: 318 F 318
>sp|O33096|ETFA_MYCLE Electron transfer flavoprotein subunit alpha OS=Mycobacterium
leprae (strain TN) GN=etfA PE=3 SV=1
Length = 318
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 52/59 (88%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
P+LYIA+GISGAIQH AGM+ SKTIVA+NKD EAPIF+++D+G+V DLFK P+LT+ +
Sbjct: 255 PQLYIALGISGAIQHRAGMQTSKTIVAVNKDEEAPIFEIADFGVVGDLFKVAPQLTDGI 313
>sp|P71153|ETFA_THETC Electron transfer flavoprotein subunit alpha
OS=Thermoanaerobacterium thermosaccharolyticum (strain
ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) GN=etfA PE=3
SV=2
Length = 330
Score = 92.8 bits (229), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/59 (69%), Positives = 51/59 (86%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
P+LYIA GISGAIQHLAGM +S TIVAINK+P+APIF+ +DYG+V DLFK +P L E++
Sbjct: 268 PKLYIACGISGAIQHLAGMSNSGTIVAINKNPDAPIFKFADYGIVGDLFKVIPVLIEEI 326
>sp|O85692|ETFA_MEGEL Electron transfer flavoprotein subunit alpha OS=Megasphaera
elsdenii GN=etfA PE=3 SV=1
Length = 338
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 46/59 (77%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
P++YIA ISGAIQ LAGM S I+AINKD +APIF+V DYG+V D+FK +P LTE +
Sbjct: 273 PKIYIACAISGAIQPLAGMTGSDCIIAINKDEDAPIFKVCDYGIVGDVFKVLPLLTEAI 331
>sp|P52039|ETFA_CLOAB Electron transfer flavoprotein subunit alpha OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=etfA PE=3 SV=2
Length = 336
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/59 (64%), Positives = 46/59 (77%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
P LYIA GISGAIQHLAGM+DS I+AINKD EAPI +V+D +V D+ K VPEL ++
Sbjct: 273 PTLYIACGISGAIQHLAGMQDSDYIIAINKDVEAPIMKVADLAIVGDVNKVVPELIAQV 331
>sp|P53578|FIXB_CLOSA Protein FixB OS=Clostridium saccharobutylicum GN=fixB PE=3 SV=1
Length = 334
Score = 80.5 bits (197), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 44/55 (80%)
Query: 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPEL 104
P +YIA GISGAIQH+AGM+DS I+AINKD API +V+DYG+V D+ +PEL
Sbjct: 269 PSIYIACGISGAIQHVAGMQDSDMIIAINKDETAPIMKVADYGIVGDVKNVLPEL 323
>sp|P59674|FIXB_ECOL6 Protein FixB OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQFADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|B7UI88|FIXB_ECO27 Protein FixB OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQFADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|Q0TLU7|FIXB_ECOL5 Protein FixB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|B7NHE6|FIXB_ECO7I Protein FixB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|B6HYZ3|FIXB_ECOSE Protein FixB OS=Escherichia coli (strain SE11) GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|A7ZVZ4|FIXB_ECOHS Protein FixB OS=Escherichia coli O9:H4 (strain HS) GN=fixB PE=3
SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|B7M0D9|FIXB_ECO8A Protein FixB OS=Escherichia coli O8 (strain IAI1) GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|B7N7R7|FIXB_ECOLU Protein FixB OS=Escherichia coli O17:K52:H18 (strain UMN026 /
ExPEC) GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|B7MNP9|FIXB_ECO81 Protein FixB OS=Escherichia coli O81 (strain ED1a) GN=fixB PE=3
SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|Q32K55|FIXB_SHIDS Protein FixB OS=Shigella dysenteriae serotype 1 (strain Sd197)
GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|Q3Z5W6|FIXB_SHISS Protein FixB OS=Shigella sonnei (strain Ss046) GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|P59675|FIXB_SHIFL Protein FixB OS=Shigella flexneri GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|B1LFX6|FIXB_ECOSM Protein FixB OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fixB
PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|P31574|FIXB_ECOLI Protein FixB OS=Escherichia coli (strain K12) GN=fixB PE=3 SV=3
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|B1IRD4|FIXB_ECOLC Protein FixB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|B1XBG7|FIXB_ECODH Protein FixB OS=Escherichia coli (strain K12 / DH10B) GN=fixB PE=3
SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|C4ZPW8|FIXB_ECOBW Protein FixB OS=Escherichia coli (strain K12 / MC4100 / BW2952)
GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|B5YYD6|FIXB_ECO5E Protein FixB OS=Escherichia coli O157:H7 (strain EC4115 / EHEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|Q8XA27|FIXB_ECO57 Protein FixB OS=Escherichia coli O157:H7 GN=fixB PE=3 SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|B7L4G5|FIXB_ECO55 Protein FixB OS=Escherichia coli (strain 55989 / EAEC) GN=fixB PE=3
SV=1
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|Q1RGF6|FIXB_ECOUT Protein FixB OS=Escherichia coli (strain UTI89 / UPEC) GN=fixB PE=3
SV=1
Length = 313
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTVA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|A1A792|FIXB_ECOK1 Protein FixB OS=Escherichia coli O1:K1 / APEC GN=fixB PE=3 SV=1
Length = 313
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTVA 310
Query: 108 L 108
L
Sbjct: 311 L 311
>sp|B7MAG5|FIXB_ECO45 Protein FixB OS=Escherichia coli O45:K1 (strain S88 / ExPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 48 LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
L PELY+AVGISG IQH+ G S+TI AINKD APIFQ +DYG+V D K +P LT
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTVA 310
Query: 108 L 108
L
Sbjct: 311 L 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,272,496
Number of Sequences: 539616
Number of extensions: 1235707
Number of successful extensions: 3404
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3336
Number of HSP's gapped (non-prelim): 76
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)