Query psy15576
Match_columns 108
No_of_seqs 133 out of 933
Neff 3.7
Searched_HMMs 29240
Date Sat Aug 17 00:49:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15576.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15576hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1efp_A ETF, protein (electron 100.0 7.9E-48 2.7E-52 307.1 7.0 102 6-108 195-307 (307)
2 1efv_A Electron transfer flavo 100.0 1.3E-47 4.5E-52 306.7 7.1 102 6-108 200-312 (315)
3 1o97_D Electron transferring f 100.0 3.4E-47 1.2E-51 304.9 6.1 102 6-108 205-318 (320)
4 1s5p_A NAD-dependent deacetyla 96.5 0.0019 6.6E-08 48.9 3.9 58 50-108 168-230 (235)
5 1q1a_A HST2 protein; ternary c 96.3 0.0031 1.1E-07 49.1 3.8 61 48-108 210-277 (289)
6 1yc5_A NAD-dependent deacetyla 96.0 0.0052 1.8E-07 46.7 3.6 58 50-108 181-243 (246)
7 2hjh_A NAD-dependent histone d 95.8 0.01 3.4E-07 47.8 4.9 58 49-108 255-316 (354)
8 1ma3_A SIR2-AF2, transcription 95.7 0.0065 2.2E-07 46.4 3.3 58 50-108 184-246 (253)
9 1q14_A HST2 protein; histone d 95.6 0.0085 2.9E-07 48.7 3.8 62 47-108 217-285 (361)
10 1m2k_A Silent information regu 95.6 0.014 4.8E-07 44.5 4.7 58 50-108 178-240 (249)
11 3k35_A NAD-dependent deacetyla 95.3 0.019 6.7E-07 46.3 4.8 59 49-108 206-269 (318)
12 1j8f_A SIRT2, sirtuin 2, isofo 95.2 0.034 1.2E-06 44.3 5.9 60 49-108 220-302 (323)
13 3riy_A NAD-dependent deacetyla 95.2 0.02 7E-07 44.4 4.5 57 49-106 212-273 (273)
14 3glr_A NAD-dependent deacetyla 95.2 0.015 5E-07 46.0 3.6 60 49-108 197-263 (285)
15 3pki_A NAD-dependent deacetyla 94.9 0.043 1.5E-06 45.1 5.7 59 49-108 206-269 (355)
16 4iao_A NAD-dependent histone d 94.6 0.051 1.7E-06 46.5 5.6 58 49-108 393-454 (492)
17 3u31_A SIR2A, transcriptional 93.6 0.053 1.8E-06 42.8 3.7 54 49-102 216-274 (290)
18 3lq1_A 2-succinyl-5-enolpyruvy 84.9 2.6 8.9E-05 34.7 7.0 58 49-107 289-351 (578)
19 1ozh_A ALS, acetolactate synth 84.7 2.7 9.1E-05 34.6 7.0 57 50-108 275-335 (566)
20 1q6z_A BFD, BFDC, benzoylforma 83.1 1.4 4.9E-05 35.7 4.6 20 88-107 309-328 (528)
21 2x7j_A 2-succinyl-5-enolpyruvy 81.3 3.8 0.00013 33.9 6.6 60 48-108 308-372 (604)
22 3qe1_A Sorting nexin-27, G pro 80.9 2.4 8.2E-05 26.9 4.3 39 43-81 36-74 (107)
23 3eya_A Pyruvate dehydrogenase 80.4 2.7 9.3E-05 34.3 5.4 58 49-108 265-323 (549)
24 2iht_A Carboxyethylarginine sy 77.9 4.6 0.00016 33.1 6.0 59 49-108 287-350 (573)
25 4feg_A Pyruvate oxidase; carba 73.6 7.4 0.00025 32.3 6.3 60 49-108 276-337 (603)
26 2pgn_A Cyclohexane-1,2-dione h 72.4 6.6 0.00022 32.4 5.7 59 49-107 271-332 (589)
27 2q28_A Oxalyl-COA decarboxylas 72.4 7.5 0.00025 31.7 5.9 59 49-107 270-332 (564)
28 2uz1_A Benzaldehyde lyase; thi 71.5 7.3 0.00025 31.8 5.7 35 73-107 297-332 (563)
29 1ybh_A Acetolactate synthase, 69.0 11 0.00037 31.1 6.2 59 49-107 278-340 (590)
30 2c31_A Oxalyl-COA decarboxylas 68.8 8.7 0.0003 31.4 5.6 59 49-107 272-336 (568)
31 2e5f_A Hypothetical protein PH 67.7 2.7 9.1E-05 32.3 2.2 47 49-96 79-127 (325)
32 2ego_A General receptor for ph 61.3 8.9 0.0003 23.8 3.4 37 45-81 32-68 (96)
33 2pan_A Glyoxylate carboligase; 59.7 12 0.0004 31.0 4.8 56 49-107 293-355 (616)
34 1w9e_A Syntenin 1; cell adhesi 57.9 11 0.00039 25.6 3.8 42 39-81 17-58 (166)
35 3bpu_A Membrane-associated gua 57.8 7.1 0.00024 23.8 2.4 28 52-81 29-56 (88)
36 4ffl_A PYLC; amino acid, biosy 56.2 8.9 0.0003 28.9 3.2 26 73-98 26-51 (363)
37 2q9v_A Membrane-associated gua 52.4 17 0.00058 22.0 3.6 29 52-80 29-58 (90)
38 1j5x_A Glucosamine-6-phosphate 50.9 4 0.00014 31.5 0.5 48 50-97 101-153 (342)
39 2eeg_A PDZ and LIM domain prot 50.5 10 0.00036 23.4 2.4 33 49-81 31-63 (94)
40 3hww_A 2-succinyl-5-enolpyruvy 49.9 31 0.001 28.2 5.7 56 49-105 278-338 (556)
41 1g9o_A NHE-RF; PDZ domain, com 49.8 21 0.00072 21.6 3.7 32 50-81 27-58 (91)
42 3e17_A Tight junction protein 49.4 20 0.0007 22.0 3.6 35 47-81 18-53 (88)
43 2i04_A Membrane-associated gua 48.8 23 0.00077 21.2 3.7 31 51-81 26-57 (85)
44 2rcz_A Tight junction protein 46.8 25 0.00087 20.4 3.6 30 52-81 23-53 (81)
45 2f5y_A Regulator of G-protein 46.7 19 0.00066 22.0 3.2 30 52-81 26-55 (91)
46 1q3o_A Shank1; PDZ, GKAP, pept 46.4 22 0.00076 22.4 3.5 31 51-81 46-76 (109)
47 2uzc_A Human pdlim5, PDZ and L 46.1 17 0.00059 21.9 2.8 31 51-81 28-58 (88)
48 2jxo_A Ezrin-radixin-moesin-bi 45.3 26 0.00087 21.6 3.6 31 51-81 34-64 (98)
49 4ap9_A Phosphoserine phosphata 44.9 27 0.00092 22.5 3.8 50 49-107 149-198 (201)
50 3cyy_A Tight junction protein 44.8 26 0.00089 21.1 3.6 32 50-81 23-55 (92)
51 3r68_A Na(+)/H(+) exchange reg 44.7 20 0.00068 21.8 3.0 31 51-81 30-60 (95)
52 3i4w_A Disks large homolog 4; 44.0 22 0.00075 22.0 3.2 32 50-81 35-67 (104)
53 2he4_A Na(+)/H(+) exchange reg 44.0 28 0.00096 21.0 3.6 31 51-81 29-59 (90)
54 1m5z_A GRIP, AMPA receptor int 43.9 20 0.00067 21.7 2.9 31 50-80 32-62 (91)
55 2fcf_A Multiple PDZ domain pro 43.4 24 0.00083 21.8 3.3 30 51-80 40-70 (103)
56 2q3g_A PDZ and LIM domain prot 43.4 20 0.00068 21.7 2.8 31 51-81 28-58 (89)
57 3o46_A Maguk P55 subfamily mem 42.6 31 0.001 21.1 3.7 32 50-81 28-60 (93)
58 2eaq_A LIM domain only protein 42.6 36 0.0012 20.5 3.9 32 50-81 28-59 (90)
59 1n7e_A AMPA receptor interacti 42.5 24 0.00083 21.7 3.2 31 51-81 31-62 (97)
60 3hpk_A Protein interacting wit 42.4 27 0.00092 22.7 3.5 33 49-81 44-77 (125)
61 2jil_A GRIP1 protein, glutamat 42.2 28 0.00095 21.3 3.4 30 51-80 33-63 (97)
62 1rgw_A ZAsp protein; PDZ, cyph 41.6 21 0.00072 21.2 2.7 30 52-81 27-56 (85)
63 2i1n_A Discs, large homolog 3; 41.3 33 0.0011 21.2 3.7 31 50-80 34-65 (102)
64 2vwr_A Ligand of NUMB protein 41.2 26 0.00089 21.4 3.2 32 50-81 29-61 (95)
65 2l97_A HTRA, putative serine p 41.1 26 0.00089 23.4 3.4 29 52-81 59-87 (134)
66 1nri_A Hypothetical protein HI 41.0 11 0.00038 28.8 1.6 45 51-96 142-192 (306)
67 2v90_A PDZ domain-containing p 40.9 26 0.00089 21.4 3.1 31 51-81 31-61 (96)
68 2pkt_A PDZ and LIM domain prot 40.4 31 0.0011 20.9 3.4 31 51-81 28-58 (91)
69 2gzv_A PRKCA-binding protein; 40.0 31 0.0011 22.4 3.5 31 50-80 50-81 (114)
70 1v5e_A Pyruvate oxidase; oxido 40.0 46 0.0016 27.4 5.3 35 73-107 294-329 (590)
71 2pa1_A PDZ and LIM domain prot 39.9 23 0.0008 21.3 2.8 31 51-81 27-57 (87)
72 2koj_A Partitioning defective 39.7 30 0.001 21.8 3.3 31 51-81 40-71 (111)
73 2fe5_A Presynaptic protein SAP 39.5 33 0.0011 20.7 3.4 30 51-80 34-64 (94)
74 3hba_A Putative phosphosugar i 38.9 15 0.00052 28.5 2.2 47 49-96 90-142 (334)
75 1uez_A KIAA1526 protein; PDZ d 38.5 33 0.0011 21.2 3.4 30 52-81 37-66 (101)
76 1d5g_A Human phosphatase HPTP1 38.4 31 0.0011 21.0 3.2 31 51-81 34-65 (96)
77 3sfj_A TAX1-binding protein 3; 38.4 34 0.0012 21.2 3.4 31 51-81 46-76 (104)
78 2r75_1 Cell division protein F 38.3 7.4 0.00025 31.0 0.3 30 54-84 13-46 (338)
79 3ngh_A PDZ domain-containing p 38.2 28 0.00097 21.7 3.0 30 52-81 28-57 (106)
80 1qav_A Alpha-1 syntrophin (res 38.2 31 0.0011 20.8 3.1 31 51-81 31-62 (90)
81 1wfv_A Membrane associated gua 37.7 25 0.00084 21.7 2.7 30 51-80 37-67 (103)
82 2qg1_A Multiple PDZ domain pro 37.6 37 0.0013 20.5 3.4 32 50-81 29-61 (92)
83 2iwn_A Multiple PDZ domain pro 37.3 41 0.0014 20.2 3.6 31 51-81 34-65 (97)
84 2vsp_A PDZ domain-containing p 37.3 24 0.00082 21.5 2.5 31 51-81 28-58 (91)
85 1whd_A RGS3, regulator of G-pr 36.7 21 0.00072 22.3 2.2 30 52-81 38-67 (100)
86 3nfk_A Tyrosine-protein phosph 36.6 27 0.00094 21.8 2.8 32 50-81 43-76 (107)
87 1y7n_A Amyloid beta A4 precurs 36.5 23 0.00077 22.2 2.3 29 53-81 34-62 (90)
88 3etn_A Putative phosphosugar i 36.3 19 0.00065 25.9 2.2 45 51-96 108-160 (220)
89 2kjd_A Sodium/hydrogen exchang 36.0 41 0.0014 21.6 3.6 31 51-81 34-64 (128)
90 2eeh_A PDZ domain-containing p 35.9 47 0.0016 20.5 3.8 31 51-81 37-67 (100)
91 2yt7_A Amyloid beta A4 precurs 35.9 37 0.0013 21.2 3.3 32 50-81 37-69 (101)
92 2djt_A Unnamed protein product 35.9 32 0.0011 21.3 3.0 30 51-80 39-69 (104)
93 2w4f_A Protein LAP4; structura 35.7 40 0.0014 20.4 3.4 31 51-81 35-65 (97)
94 2opg_A Multiple PDZ domain pro 35.5 43 0.0015 20.4 3.5 30 51-80 31-61 (98)
95 4dxd_A Cell division protein F 35.5 7.4 0.00025 32.4 -0.1 36 54-90 21-62 (396)
96 2g5m_B Neurabin-2; spinophilin 35.4 37 0.0013 21.4 3.3 31 51-81 36-67 (113)
97 2kv8_A RGS12, regulator of G-p 35.4 17 0.00059 21.7 1.6 30 52-81 25-54 (83)
98 3g68_A Putative phosphosugar i 35.2 29 0.001 26.9 3.2 47 49-96 82-134 (352)
99 1tp5_A Presynaptic density pro 35.1 37 0.0013 21.6 3.3 31 50-80 38-69 (119)
100 2zpm_A Regulator of sigma E pr 34.9 25 0.00085 21.2 2.3 23 59-81 13-35 (91)
101 2d90_A PDZ domain containing p 34.5 35 0.0012 21.1 3.0 31 51-81 31-61 (102)
102 2r4h_A Membrane-associated gua 34.3 40 0.0014 21.5 3.3 31 50-80 49-80 (112)
103 2dlu_A INAD-like protein; PDZ 34.2 41 0.0014 21.1 3.4 31 51-81 39-70 (111)
104 1uep_A Membrane associated gua 34.2 30 0.001 21.6 2.7 30 51-80 35-65 (103)
105 2i6v_A General secretion pathw 34.1 49 0.0017 20.1 3.6 25 57-81 26-50 (87)
106 1qau_A Neuronal nitric oxide s 34.1 47 0.0016 20.8 3.6 31 51-81 27-58 (112)
107 1nf3_C PAR-6B; semi-CRIB motif 34.1 39 0.0013 22.1 3.3 32 50-81 65-97 (128)
108 1wf8_A Neurabin-I; PDZ domain, 33.9 40 0.0014 21.1 3.2 31 51-81 41-72 (107)
109 2eei_A PDZ domain-containing p 33.9 32 0.0011 21.4 2.7 31 51-81 33-63 (106)
110 1wi2_A Riken cDNA 2700099C19; 33.8 39 0.0013 21.1 3.2 31 51-81 42-72 (104)
111 3fj1_A Putative phosphosugar i 33.7 12 0.00043 29.0 0.9 47 49-96 91-143 (344)
112 3khf_A Microtubule-associated 33.7 45 0.0015 20.4 3.4 30 52-81 36-65 (99)
113 2jre_A C60-1 PDZ domain peptid 33.5 39 0.0013 21.1 3.1 31 51-81 45-76 (108)
114 1q7x_A PDZ2B domain of PTP-BAS 33.4 49 0.0017 20.6 3.6 31 51-81 43-74 (108)
115 1r6j_A Syntenin 1; PDZ, membra 33.3 24 0.00081 22.4 2.1 27 54-80 27-53 (82)
116 2dkr_A LIN-7 homolog B; LIN-7B 33.3 40 0.0014 20.3 3.1 32 50-81 30-62 (93)
117 2dmz_A INAD-like protein; PDZ 33.3 42 0.0014 21.7 3.4 32 50-81 46-78 (129)
118 3cf4_G Acetyl-COA decarboxylas 33.1 6.2 0.00021 27.6 -0.9 11 97-107 156-166 (170)
119 3l4f_D SH3 and multiple ankyri 33.0 48 0.0016 22.1 3.7 31 51-81 66-96 (132)
120 1wi4_A Synip, syntaxin binding 32.9 53 0.0018 21.0 3.8 32 50-81 41-73 (109)
121 2d92_A INAD-like protein; PDZ 32.6 51 0.0018 20.8 3.6 32 50-81 44-76 (108)
122 1ihj_A INAD; intermolecular di 32.4 49 0.0017 20.1 3.4 30 52-81 39-69 (98)
123 1x5q_A LAP4 protein; PDZ domai 32.0 48 0.0016 20.8 3.4 31 51-81 47-77 (110)
124 3tbf_A Glucosamine--fructose-6 32.0 27 0.00094 27.4 2.6 49 49-97 101-155 (372)
125 1kwa_A Hcask/LIN-2 protein; PD 32.0 63 0.0022 19.7 3.9 29 52-80 27-56 (88)
126 2jik_A Synaptojanin-2 binding 31.9 50 0.0017 20.3 3.4 30 51-80 38-68 (101)
127 1ujd_A KIAA0559 protein; PDZ d 31.8 61 0.0021 20.7 4.0 31 51-81 50-81 (117)
128 1va8_A Maguk P55 subfamily mem 31.7 54 0.0018 20.9 3.6 33 49-81 47-80 (113)
129 2kom_A Partitioning defective 31.5 47 0.0016 21.6 3.4 31 51-81 59-90 (121)
130 2z17_A Pleckstrin homology SEC 31.5 31 0.0011 21.5 2.4 31 50-80 48-78 (104)
131 1vb7_A PDZ and LIM domain 2; P 31.2 26 0.0009 21.5 2.0 30 52-81 32-61 (94)
132 1wfg_A Regulating synaptic mem 31.2 50 0.0017 21.9 3.5 33 49-81 64-97 (131)
133 2poc_A D-fructose-6- PH, isome 31.2 12 0.0004 29.2 0.4 45 51-96 99-149 (367)
134 3axa_A Afadin, nectin-3, prote 31.1 52 0.0018 20.5 3.4 31 51-81 39-70 (106)
135 3q2o_A Phosphoribosylaminoimid 31.0 29 0.00098 26.6 2.5 26 74-99 40-65 (389)
136 3qik_A Phosphatidylinositol 3, 30.9 22 0.00075 24.0 1.6 30 52-81 41-70 (101)
137 1wha_A KIAA0147 protein, scrib 30.8 52 0.0018 20.5 3.4 32 50-81 38-70 (105)
138 3knz_A Putative sugar binding 30.8 37 0.0013 26.6 3.2 47 49-96 97-149 (366)
139 1um7_A Synapse-associated prot 30.6 35 0.0012 21.3 2.5 32 50-81 39-71 (113)
140 3b76_A E3 ubiquitin-protein li 30.4 51 0.0017 21.6 3.4 30 51-80 54-84 (118)
141 1v6b_A Harmonin isoform A1; st 30.4 60 0.0021 20.9 3.7 32 50-81 43-75 (118)
142 3eua_A Putative fructose-amino 30.3 27 0.00092 26.7 2.3 47 49-96 74-126 (329)
143 1vae_A Rhophilin 2, rhophilin, 29.9 32 0.0011 22.4 2.3 30 52-81 38-67 (111)
144 1uit_A Human discs large 5 pro 29.8 42 0.0014 21.4 2.8 31 51-81 43-73 (117)
145 2a3n_A Putative glucosamine-fr 29.5 17 0.00058 28.1 1.0 47 49-96 102-154 (355)
146 3orq_A N5-carboxyaminoimidazol 29.3 33 0.0011 26.4 2.6 27 73-99 37-63 (377)
147 1uew_A Membrane associated gua 29.2 48 0.0016 21.0 3.0 31 51-81 44-75 (114)
148 1v62_A KIAA1719 protein; struc 29.0 57 0.002 20.9 3.4 30 52-81 44-74 (117)
149 4e34_A Golgi-associated PDZ an 28.9 53 0.0018 19.5 3.1 31 51-81 29-60 (87)
150 2daz_A INAD-like protein; PDZ 28.7 52 0.0018 21.2 3.2 31 51-81 52-83 (124)
151 4amh_A Disks large homolog 1; 28.5 76 0.0026 20.0 3.9 31 51-81 33-64 (106)
152 1wf7_A Enigma homologue protei 28.2 48 0.0016 20.6 2.8 30 52-81 31-60 (103)
153 2h2b_A Tight junction protein 28.2 50 0.0017 20.5 2.9 30 51-81 40-69 (107)
154 2la8_A Inactivation-NO-after-p 28.2 57 0.0019 20.9 3.3 30 52-81 27-57 (106)
155 1uf1_A KIAA1526 protein; PDZ d 28.2 64 0.0022 20.9 3.6 31 51-81 47-77 (128)
156 1t9b_A Acetolactate synthase, 28.1 54 0.0018 27.9 3.9 35 74-108 393-428 (677)
157 3fkj_A Putative phosphosugar i 28.1 27 0.00093 27.1 2.0 48 49-97 89-142 (347)
158 2zj3_A Glucosamine--fructose-6 28.0 15 0.00051 28.7 0.5 45 51-96 109-159 (375)
159 2dls_A PDZ-rhogef, RHO guanine 27.9 40 0.0014 20.6 2.4 30 52-81 31-60 (93)
160 3cbz_A Dishevelled-2; PDZ doma 27.8 70 0.0024 20.2 3.6 32 50-81 33-65 (108)
161 1um1_A KIAA1849 protein, RSGI 27.5 79 0.0027 19.7 3.8 31 51-81 37-68 (110)
162 2awx_A Synapse associated prot 27.4 65 0.0022 20.0 3.4 31 51-81 34-65 (105)
163 3id1_A Regulator of sigma E pr 27.4 61 0.0021 20.2 3.3 24 58-81 10-33 (95)
164 2i4s_A General secretion pathw 27.1 72 0.0025 20.0 3.6 28 54-81 41-68 (105)
165 2edz_A PDZ domain-containing p 27.0 51 0.0017 20.9 2.9 31 51-81 39-69 (114)
166 2eno_A Synaptojanin-2-binding 26.8 61 0.0021 20.7 3.3 30 51-80 48-78 (120)
167 2qkv_A Inactivation-NO-after-p 26.4 55 0.0019 20.2 2.9 30 52-81 33-63 (96)
168 1wh1_A KIAA1095 protein; PDZ d 26.3 69 0.0024 20.7 3.5 31 51-81 49-80 (124)
169 1moq_A Glucosamine 6-phosphate 26.3 42 0.0014 25.9 2.7 48 49-96 99-152 (368)
170 2kpk_A Membrane-associated gua 26.2 69 0.0023 20.9 3.5 30 51-80 44-74 (129)
171 3p0f_A Uridine phosphorylase 2 26.2 28 0.00096 27.0 1.7 25 48-76 120-144 (297)
172 2iwq_A Multiple PDZ domain pro 26.1 83 0.0028 20.6 3.9 30 51-80 60-90 (123)
173 2vsv_A Rhophilin-2; scaffold p 26.1 62 0.0021 21.1 3.2 30 52-81 46-75 (109)
174 1uhp_A Hypothetical protein KI 26.0 68 0.0023 20.0 3.3 31 51-81 42-73 (107)
175 2byg_A Channel associated prot 25.9 69 0.0024 20.7 3.4 30 51-80 55-85 (117)
176 2xhz_A KDSD, YRBH, arabinose 5 25.6 43 0.0015 22.5 2.4 45 51-96 98-148 (183)
177 2vz5_A TAX1-binding protein 3; 25.5 68 0.0023 21.5 3.4 31 51-81 65-95 (139)
178 2dm8_A INAD-like protein; PDZ 25.4 48 0.0016 20.9 2.5 31 51-81 44-75 (116)
179 2d8i_A T-cell lymphoma invasio 25.1 61 0.0021 21.3 3.0 31 51-81 45-75 (114)
180 1x5n_A Harmonin; PDZ domain, u 25.0 56 0.0019 20.6 2.8 31 51-81 42-72 (114)
181 2ehr_A INAD-like protein; PDZ 24.9 60 0.002 20.6 2.9 32 50-81 50-82 (117)
182 1ufx_A KIAA1526 protein; PDZ d 24.9 43 0.0015 21.3 2.2 32 50-81 32-64 (103)
183 1wg6_A Hypothetical protein (r 24.7 49 0.0017 21.7 2.5 30 51-80 56-86 (127)
184 2ejy_A 55 kDa erythrocyte memb 24.6 80 0.0027 20.1 3.5 31 51-81 37-68 (97)
185 2p3w_A Probable serine proteas 24.6 78 0.0027 19.9 3.4 24 58-81 43-66 (112)
186 2pzd_A Serine protease HTRA2; 24.5 88 0.003 19.6 3.7 24 58-81 43-66 (113)
187 2o2t_A Multiple PDZ domain pro 24.4 65 0.0022 20.3 3.0 30 51-80 50-80 (117)
188 1p1d_A PDZ45, glutamate recept 24.4 76 0.0026 21.9 3.6 33 50-82 36-69 (196)
189 2edp_A Fragment, shroom family 24.3 51 0.0017 20.5 2.4 31 51-81 36-67 (100)
190 3stj_A Protease DEGQ; serine p 24.0 41 0.0014 26.1 2.3 44 37-81 239-294 (345)
191 1ybf_A AMP nucleosidase; struc 23.8 83 0.0028 23.4 3.9 36 47-84 85-123 (268)
192 2e7k_A Maguk P55 subfamily mem 23.5 83 0.0028 19.2 3.3 31 51-81 30-61 (91)
193 1v5q_A GRIP1 homolog, glutamat 23.3 72 0.0025 20.5 3.1 30 51-80 46-76 (122)
194 3egg_C Spinophilin; PP1, serin 23.3 82 0.0028 22.1 3.6 30 51-80 112-142 (170)
195 1ueq_A Membrane associated gua 23.2 76 0.0026 20.5 3.2 29 52-80 46-75 (123)
196 4g41_A MTA/SAH nucleosidase; m 23.1 63 0.0022 22.9 3.0 37 48-86 71-110 (236)
197 3gsl_A Disks large homolog 4; 23.1 92 0.0031 20.8 3.7 32 50-81 35-67 (196)
198 2xbl_A Phosphoheptose isomeras 22.7 45 0.0016 22.6 2.1 45 51-96 118-168 (198)
199 3gsl_A Disks large homolog 4; 22.7 83 0.0028 21.0 3.4 31 51-81 131-162 (196)
200 2fne_A Multiple PDZ domain pro 22.6 87 0.003 20.2 3.4 30 51-80 54-84 (117)
201 1wif_A RSGI RUH-020, riken cDN 22.4 69 0.0024 21.6 3.0 32 50-81 49-81 (126)
202 3fxa_A SIS domain protein; str 22.4 32 0.0011 23.7 1.3 45 51-96 94-144 (201)
203 3tsv_A Tight junction protein 22.3 86 0.0029 20.5 3.4 31 51-81 52-82 (124)
204 2db5_A INAD-like protein; PDZ 22.2 78 0.0027 20.4 3.1 31 51-81 55-86 (128)
205 2aml_A SIS domain protein; 469 22.0 1.1E+02 0.0037 23.8 4.4 47 49-96 97-150 (373)
206 2cs5_A Tyrosine-protein phosph 22.0 65 0.0022 20.5 2.7 30 52-81 43-74 (119)
207 3ddo_A Urdpase, upase, uridine 22.0 88 0.003 23.1 3.7 38 48-87 84-124 (253)
208 3k1r_A Harmonin; protein-prote 21.8 77 0.0026 22.1 3.2 33 49-81 109-141 (192)
209 2i2w_A Phosphoheptose isomeras 21.7 46 0.0016 23.4 2.0 49 48-97 129-184 (212)
210 1v5l_A PDZ and LIM domain 3; a 21.6 51 0.0017 20.5 2.0 31 51-81 30-60 (103)
211 2qt5_A Glutamate receptor-inte 21.5 78 0.0027 21.8 3.1 30 52-81 35-65 (200)
212 2vxy_A FTSZ, cell division pro 21.4 22 0.00075 29.0 0.3 29 54-83 15-49 (382)
213 2yub_A LIMK-2, LIM domain kina 21.4 73 0.0025 20.9 2.9 30 52-81 46-77 (118)
214 1vim_A Hypothetical protein AF 21.3 35 0.0012 23.9 1.3 49 48-97 87-142 (200)
215 1t8s_A AMP nucleosidase; alpha 21.3 89 0.0031 26.3 4.0 37 48-86 295-334 (484)
216 3qpb_A Uridine phosphorylase; 20.9 93 0.0032 23.7 3.7 47 48-96 110-159 (282)
217 2vaw_A FTSZ, cell division pro 20.7 47 0.0016 27.1 2.1 35 54-89 15-55 (394)
218 2dc2_A GOPC, golgi associated 20.5 91 0.0031 19.4 3.1 30 52-81 37-67 (103)
219 4e4t_A Phosphoribosylaminoimid 20.4 27 0.00092 27.6 0.6 25 74-98 61-85 (419)
220 2yuy_A RHO GTPase activating p 20.3 31 0.001 22.5 0.7 29 52-80 63-91 (126)
No 1
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=100.00 E-value=7.9e-48 Score=307.13 Aligned_cols=102 Identities=53% Similarity=0.749 Sum_probs=94.8
Q ss_pred eecCCccccccccccccccccchhhhhhc-----------cccceeeeccCeeeCcceEEeeccchhhHhhhccCCCCeE
Q psy15576 6 RNSNHKVLQITQTYNSFSQPHYPKLLTVQ-----------IAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTI 74 (108)
Q Consensus 6 ~~s~~r~~~~~~~~~~~~~pva~kL~a~~-----------i~~~~igg~SGktV~P~lYia~GISGA~QH~~Gm~~s~~I 74 (108)
=+||||||++.||| ++++++||+||++- ++..++.|+|||+|+|+||||||||||+||++||++||+|
T Consensus 195 vVsgGRG~~~~e~f-~~~~~LA~~Lga~vgaSR~~vd~Gw~~~~~QVGqTGk~V~P~lYiA~GISGAiQHlaGm~~s~~I 273 (307)
T 1efp_A 195 VVSGGRGLGSKESF-AIIEELADKLGAAVGASRAAVDSGYAPNDWQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKVI 273 (307)
T ss_dssp EEEECGGGCSSSTT-HHHHHHHHHHTCEEEECHHHHHTTSSCGGGBBSSSSBCCCCSEEEEESCCCCHHHHTTTTTCSEE
T ss_pred EEEcCCcCCCHHHH-HHHHHHHHHhCCceeecHHHHhCCCCChhhEeccCCcccCCceEEEEeccCcHHHHhhhccCCEE
Confidence 37999999999999 68899999999872 5555555599999999999999999999999999999999
Q ss_pred EEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576 75 VAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 75 IAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l 108 (108)
||||+||+||||++||||||||++|++|+|+++|
T Consensus 274 VAIN~D~~ApIF~~ADygiVgDl~~v~P~L~~~l 307 (307)
T 1efp_A 274 VAINKDEEAPIFQIADYGLVGDLFSVVPELTGKL 307 (307)
T ss_dssp EEEESCTTCGGGGTCSEEEESCHHHHHHHHHHTC
T ss_pred EEEeCCCCCCcccccCeEEeeeHHHHHHHHHhhC
Confidence 9999999999999999999999999999999986
No 2
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=100.00 E-value=1.3e-47 Score=306.75 Aligned_cols=102 Identities=56% Similarity=0.782 Sum_probs=94.7
Q ss_pred eecCCccccccccccccccccchhhhhhc-----------cccceeeeccCeeeCcceEEeeccchhhHhhhccCCCCeE
Q psy15576 6 RNSNHKVLQITQTYNSFSQPHYPKLLTVQ-----------IAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTI 74 (108)
Q Consensus 6 ~~s~~r~~~~~~~~~~~~~pva~kL~a~~-----------i~~~~igg~SGktV~P~lYia~GISGA~QH~~Gm~~s~~I 74 (108)
=+||||||++.||| ++++++||+||++- ++..++.|+|||+|+|+||||||||||+||++||++||+|
T Consensus 200 vVsgGrG~~~~e~f-~~~~~LA~~Lga~vgaSR~~vd~Gw~~~~~QVGqTGk~V~P~lYiA~GISGAiQHlaGm~~s~~I 278 (315)
T 1efv_A 200 VVSGGRGLKSGENF-KLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTI 278 (315)
T ss_dssp EEEECGGGCSTGGG-HHHHHHHHHHTCEEEECHHHHHTTSSCGGGBBSTTSBCCCCSEEEEESCCCCHHHHTTTTTCSEE
T ss_pred EEEcCCcCCChHHH-HHHHHHHHHhCCceeecHHHHhCCCCCHHheeccCCcccCcceEEEecccCcHHHHhhcccCCEE
Confidence 37999999999999 68899999999872 5555555599999999999999999999999999999999
Q ss_pred EEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576 75 VAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 75 IAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l 108 (108)
||||+||+||||++||||||||++|++|+|+++|
T Consensus 279 VAIN~D~~ApIf~~ADygiVgDl~~v~P~L~~~l 312 (315)
T 1efv_A 279 VAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 312 (315)
T ss_dssp EEEESCTTCGGGGTCSEEEESCHHHHHHHHHHHT
T ss_pred EEEeCCCCCCcchhcCeEEeeeHHHHHHHHHHHH
Confidence 9999999999999999999999999999999976
No 3
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=100.00 E-value=3.4e-47 Score=304.88 Aligned_cols=102 Identities=32% Similarity=0.465 Sum_probs=94.7
Q ss_pred eecCCccccccccccccccccchhhhhhc-----------cccceeeeccCeeeCc-ceEEeeccchhhHhhhccCCCCe
Q psy15576 6 RNSNHKVLQITQTYNSFSQPHYPKLLTVQ-----------IAETYISALKASQLIP-ELYIAVGISGAIQHLAGMKDSKT 73 (108)
Q Consensus 6 ~~s~~r~~~~~~~~~~~~~pva~kL~a~~-----------i~~~~igg~SGktV~P-~lYia~GISGA~QH~~Gm~~s~~ 73 (108)
=+||||||++.||| ++++++||+||++- ++..++.|+|||+|+| +||||||||||+||++||++||+
T Consensus 205 vVsgGRG~~~~e~f-~~~~~LA~~Lga~vgaSR~~vd~Gw~~~~~QVGqTGk~V~P~~lYiA~GISGAiQHlaGm~~s~~ 283 (320)
T 1o97_D 205 IMSIGRGIGEETNV-EQFRELADEAGATLCCSRPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQHMAGMKHVPT 283 (320)
T ss_dssp EEEECGGGCSGGGH-HHHHHHHHHHTCEEEECHHHHHTTSSCGGGBBSTTSBCCTTCSEEEEESCCCCHHHHHHHTTCSE
T ss_pred EEEcCCccCChHHH-HHHHHHHHHhCCceeecHHHHhCCCCChhhEeecCceEecccceEEEEeccCcHHHHhhcccCCE
Confidence 37999999999999 68899999999872 4555555599999999 99999999999999999999999
Q ss_pred EEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576 74 IVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 74 IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l 108 (108)
|||||+||+||||++||||||||++|++|+|+++|
T Consensus 284 IVAIN~D~~ApIF~~ADygiVgDl~~vvP~L~~~l 318 (320)
T 1o97_D 284 IIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQL 318 (320)
T ss_dssp EEEECSCTTCGGGGTCSEEECSCHHHHHHHHHHHC
T ss_pred EEEEeCCCCCCcccccCeEEeeeHHHHHHHHHHHH
Confidence 99999999999999999999999999999999976
No 4
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=96.54 E-value=0.0019 Score=48.89 Aligned_cols=58 Identities=28% Similarity=0.422 Sum_probs=43.8
Q ss_pred cceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576 50 PELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 50 P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l 108 (108)
.+|+|.+|.|+.++=.+++ +.-..+|.||.+|. +.-+.+|+.+.+|+.|+||+|.++|
T Consensus 168 adl~lviGTSl~V~Pa~~l~~~a~~~g~~~i~iN~~~t-~~~~~~~~~i~~~~~~~l~~l~~~l 230 (235)
T 1s5p_A 168 ADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEPS-QVGNEFAEKYYGPASQVVPEFVEKL 230 (235)
T ss_dssp CSEEEEESCCTTEETGGGHHHHHHHTTCEEEEEESSSC-C---CCSEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEECcCCchhhHHHHHHHHHHcCCeEEEEECCCC-CCCccccEEEeCCHHHHHHHHHHHH
Confidence 4799999999988544443 12346889999985 5667899999999999999998753
No 5
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=96.27 E-value=0.0031 Score=49.10 Aligned_cols=61 Identities=21% Similarity=0.115 Sum_probs=46.0
Q ss_pred eCcceEEeeccchhhHhhhcc----CCCCeEEEecCCCCCCc---ccccCeeEeeeHHHHHHHHHhhC
Q psy15576 48 LIPELYIAVGISGAIQHLAGM----KDSKTIVAINKDPEAPI---FQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 48 V~P~lYia~GISGA~QH~~Gm----~~s~~IIAIN~Dp~ApI---f~~ADygiVgD~~evlp~Li~~l 108 (108)
-+.+|+|.+|.|+.++=.+++ +.-..+|.||.+|..+. -+.+|+.+.+|+.+++|+|.++|
T Consensus 210 ~~~DlllviGTSl~V~Pa~~l~~~~~~~~~~v~IN~~~~~~~~~~~~~~d~~i~~~~~~~l~~l~~~l 277 (289)
T 1q1a_A 210 PQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEEL 277 (289)
T ss_dssp CCCCEEEEESCCCCEETTTHHHHHSCTTSEEEEESSSCCTHHHHSCCTTCEEECCCHHHHHHHHHHHH
T ss_pred ccCCEEEEEccCCChhhHHHHHHHHhcCCCEEEEECCCcccCCCCCcceeEEEeCCHHHHHHHHHHHc
Confidence 367999999999877544443 32335778999997532 23589999999999999998753
No 6
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=95.97 E-value=0.0052 Score=46.72 Aligned_cols=58 Identities=17% Similarity=0.235 Sum_probs=46.6
Q ss_pred cceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576 50 PELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 50 P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l 108 (108)
.+|+|.+|-|+.++=.+++ +.-..+|.||.+|. +.-+.+|+.+-+|+.|++|+|.++|
T Consensus 181 adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~IN~~~~-~~d~~~~~~i~~~~~~~l~~l~~~l 243 (246)
T 1yc5_A 181 ASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGET-PFDDIATLKYNMDVVEFARRVMEEG 243 (246)
T ss_dssp CSEEEEESCCSCEETGGGHHHHHHHHTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcchhHHHHHHHHHHcCCeEEEEeCCCC-CCCcceeEEEeCCHHHHHHHHHHHc
Confidence 4899999999988766655 12346889999875 4566889999999999999998764
No 7
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=95.84 E-value=0.01 Score=47.77 Aligned_cols=58 Identities=21% Similarity=0.224 Sum_probs=45.7
Q ss_pred CcceEEeeccchhhHhhhcc----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576 49 IPELYIAVGISGAIQHLAGM----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l 108 (108)
+.+|+|.+|.|.+++=.+++ +....+|.||.+|.. ...+|+.|.||+.+++|+|.++|
T Consensus 255 ~aDllLviGTSL~V~Paa~lv~~~~~~~~~v~IN~~~t~--~~~~dl~i~g~~~~vl~~L~~~l 316 (354)
T 2hjh_A 255 ECDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVK--HAEFDLSLLGYCDDIAAMVAQKC 316 (354)
T ss_dssp TCCEEEEESCCCCEETGGGHHHHSCTTSCEEEEESSCCT--TSCCSEEEESCHHHHHHHHHHHH
T ss_pred hCCEEEEECcCCCchhHHHHHHHHhcCCcEEEEcCCCCC--CCCcCEEEeCCHHHHHHHHHHHc
Confidence 46899999999987655543 323368899999875 25699999999999999998753
No 8
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=95.73 E-value=0.0065 Score=46.44 Aligned_cols=58 Identities=17% Similarity=0.328 Sum_probs=45.9
Q ss_pred cceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576 50 PELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 50 P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l 108 (108)
.+|+|.+|-|..++=.+++ +.-..+|.||.++. +.-+.+|+.+-+|+.++||+|.+.|
T Consensus 184 adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~iN~~~~-~~d~~~~~~i~~~~~~~l~~l~~~l 246 (253)
T 1ma3_A 184 CDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPT-MADPIFDVKIIGKAGEVLPKIVEEV 246 (253)
T ss_dssp CSEEEEESCCSCEETGGGHHHHHHHHTCEEEEEESSCC-TTGGGCSEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEECCCceeccHHHHHHHHHHcCCeEEEEeCCCC-CCCCceeEEEeCCHHHHHHHHHHHH
Confidence 4899999999888665555 11346889999875 4566799999999999999998753
No 9
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=95.63 E-value=0.0085 Score=48.75 Aligned_cols=62 Identities=21% Similarity=0.119 Sum_probs=46.1
Q ss_pred eeCcceEEeeccchhhHhhhcc----CCCCeEEEecCCCCCCc---ccccCeeEeeeHHHHHHHHHhhC
Q psy15576 47 QLIPELYIAVGISGAIQHLAGM----KDSKTIVAINKDPEAPI---FQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 47 tV~P~lYia~GISGA~QH~~Gm----~~s~~IIAIN~Dp~ApI---f~~ADygiVgD~~evlp~Li~~l 108 (108)
.-+.+|+|.+|.|+.++=.+++ +.-..+|.||.+|..+. -..+|+.|-+|+.+++|+|.+.|
T Consensus 217 ~~~aDllLviGTSl~V~Paa~l~~~~~~g~~~v~IN~~~t~~~~~~~~~~d~~i~g~~~evl~~L~~~L 285 (361)
T 1q14_A 217 HPQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEEL 285 (361)
T ss_dssp --CCCEEEEESCCCCSTTGGGHHHHSCTTSEEEEESSSCCHHHHHTCCTTCEEECSCHHHHHHHHHHHH
T ss_pred hccCCEEEEECCCCCchhHHHHHHHHhcCCeEEEEeCCCccccccCcccccEEEeCCHHHHHHHHHHHc
Confidence 3467999999999987655554 32335778999986422 24589999999999999998753
No 10
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=95.59 E-value=0.014 Score=44.46 Aligned_cols=58 Identities=24% Similarity=0.419 Sum_probs=45.6
Q ss_pred cceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576 50 PELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 50 P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l 108 (108)
.+|+|.+|-|+.++=.+++ +.-..+|.||.++.. .-+.+|+.+-+|+.+++|+|.++|
T Consensus 178 adlllviGTSl~V~P~~~l~~~a~~~g~~~i~IN~~~~~-~d~~~~~~i~~~~~~~l~~l~~~l 240 (249)
T 1m2k_A 178 ADVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINPDETP-LTPIADYSLRGKAGEVMDELVRHV 240 (249)
T ss_dssp CSEEEEESCCSCSTTGGGHHHHHHHTTCEEEEECSSCCT-TGGGCSEEECSCHHHHHHHHHHHH
T ss_pred CCEEEEEccCCCccchHHHHHHHHHcCCeEEEEeCCCCC-CCcceeEEEeCCHHHHHHHHHHHH
Confidence 4899999999988755542 123468899998854 566789999999999999998753
No 11
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=95.32 E-value=0.019 Score=46.27 Aligned_cols=59 Identities=19% Similarity=0.249 Sum_probs=47.8
Q ss_pred CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576 49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l 108 (108)
+.+|.|.+|-|+.++--+++ +.-..+|.||.++. +.=+.||+.|-+++.+++|+|.++|
T Consensus 206 ~aDllLViGTSL~V~Paa~l~~~a~~~G~~vviIN~~~t-~~d~~adl~i~g~~~evl~~L~~~L 269 (318)
T 3k35_A 206 NADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPT-KHDRHADLRIHGYVDEVMTRLMKHL 269 (318)
T ss_dssp TCSEEEEESCCCCSTTGGGHHHHHHHTTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHH
T ss_pred cCCEEEEEccCCCchhhhhhHHHHHhcCCEEEEECCCCC-CCCCcccEEEeCCHHHHHHHHHHHh
Confidence 45789999999998877776 23345888999885 4567899999999999999998764
No 12
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=95.23 E-value=0.034 Score=44.29 Aligned_cols=60 Identities=23% Similarity=0.287 Sum_probs=46.0
Q ss_pred CcceEEeeccchhhHhhhcc----CCCCeEEEecCCCCCC---c------------c----cccCeeEeeeHHHHHHHHH
Q psy15576 49 IPELYIAVGISGAIQHLAGM----KDSKTIVAINKDPEAP---I------------F----QVSDYGLVADLFKAVPELT 105 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm----~~s~~IIAIN~Dp~Ap---I------------f----~~ADygiVgD~~evlp~Li 105 (108)
+.+|+|.+|.|..++=.+++ +....+|.||.++... | | +.+|+.+.||+.+++++|.
T Consensus 220 ~aDlllviGTSl~V~P~a~l~~~~~~~~~~v~IN~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~gd~~~~l~~L~ 299 (323)
T 1j8f_A 220 KVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKAGQSDPFLGMIMGLGGGMDFDSKKAYRDVAWLGECDQGCLALA 299 (323)
T ss_dssp SCSEEEEESSCSCSHHHHHHHTTSCTTCCEEEEESSCCCCCCHHHHHHHHHHTCCCSSSTTCCSEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEeeCcccHHHHHHHHHHHcCCcEEEEeCCCCCCCcccccccccccccccccccccceeEEEeCCHHHHHHHHH
Confidence 67999999999998755544 2224567899988642 1 1 4589999999999999998
Q ss_pred hhC
Q psy15576 106 EKL 108 (108)
Q Consensus 106 ~~l 108 (108)
++|
T Consensus 300 ~~l 302 (323)
T 1j8f_A 300 ELL 302 (323)
T ss_dssp HHT
T ss_pred HHc
Confidence 765
No 13
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=95.21 E-value=0.02 Score=44.36 Aligned_cols=57 Identities=14% Similarity=0.153 Sum_probs=45.0
Q ss_pred CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHh
Q psy15576 49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTE 106 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~ 106 (108)
+.+|+|.+|.|+.+.=-+++ +.-..+|.||.+|.. .=+.+|+.+-+|+.|+||+|+.
T Consensus 212 ~aDl~lviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t~-~d~~~~~~i~g~~~~~l~~l~~ 273 (273)
T 3riy_A 212 HCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTP-ATNRFRFHFQGPCGTTLPEALA 273 (273)
T ss_dssp HCSEEEEESCCSCEETGGGHHHHHHHTTCCEEEEESSCCT-TGGGSSEEEESCHHHHHHHHHC
T ss_pred cCCEEEEEeeCCcchhHHHhHHHHHHCCCEEEEECCCCCC-CCcceeEEEeCCHHHHHHHHhC
Confidence 35789999999988666665 123468899998754 5578999999999999999863
No 14
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=95.15 E-value=0.015 Score=46.02 Aligned_cols=60 Identities=25% Similarity=0.397 Sum_probs=47.8
Q ss_pred CcceEEeeccchhhHhhhccC----CCCeEEEecCCCCCCc---ccccCeeEeeeHHHHHHHHHhhC
Q psy15576 49 IPELYIAVGISGAIQHLAGMK----DSKTIVAINKDPEAPI---FQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm~----~s~~IIAIN~Dp~ApI---f~~ADygiVgD~~evlp~Li~~l 108 (108)
+.+|.|.+|-|+.++-.+++- ....+|.||.+|-.+. -..+|+.+.||+.+++|+|.+.|
T Consensus 197 ~aDlllviGTSl~V~Paa~l~~~~~~~~~~v~IN~~~~~~~~~~~~~~d~~~~g~~~~~~~~L~~~l 263 (285)
T 3glr_A 197 MADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRDLVGPLAWHPRSRDVAQLGDVVHGVESLVELL 263 (285)
T ss_dssp HCSEEEEESCCCCEETTGGGGGSSCTTSCEEEEESSCCTHHHHSCCTTEEEEESCHHHHHHHHHHHH
T ss_pred cCCEEEEeCCCCccccHHHHHHHHhCCCcEEEECCCCcCccccCCCCccEEEcCCHHHHHHHHHHHh
Confidence 468999999999988776653 2235788999996542 25799999999999999998764
No 15
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=94.88 E-value=0.043 Score=45.10 Aligned_cols=59 Identities=20% Similarity=0.263 Sum_probs=48.0
Q ss_pred CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576 49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l 108 (108)
+.+|.|.+|-|+.++=-+++ +.-..+|.||.++. +.=+.||+.|-+++.+++|+|.++|
T Consensus 206 ~aDllLViGTSL~V~Paa~Lp~~a~~~G~~vviIN~~pT-~~d~~adl~i~g~a~evl~~L~~~L 269 (355)
T 3pki_A 206 NADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPT-KHDRHADLRIHGYVDEVMTRLMEHL 269 (355)
T ss_dssp HCSEEEEESCCCCSTTGGGTTHHHHHTTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHT
T ss_pred cCCEEEEEeeCCCchhhhhhHHHHHhcCCEEEEECCCCC-CCCCccCEEEeCCHHHHHHHHHHHh
Confidence 35789999999998877776 22346888999885 4557899999999999999998865
No 16
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}
Probab=94.57 E-value=0.051 Score=46.52 Aligned_cols=58 Identities=21% Similarity=0.218 Sum_probs=47.1
Q ss_pred CcceEEeeccchhhHhhhcc----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576 49 IPELYIAVGISGAIQHLAGM----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l 108 (108)
+.+|.|.+|-|+.++=.+++ +....+|.||.+|-.. ..+|+.+.||+.+++++|.++|
T Consensus 393 ~aDLlLVIGTSL~VyPaA~Lv~~a~~~~p~ViIN~ept~~--~~~Dl~l~G~cdevv~~L~~~L 454 (492)
T 4iao_A 393 ECDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVKH--AEFDLSLLGYCDDIAAMVAQKC 454 (492)
T ss_dssp TCSEEEEESCCCCEETGGGHHHHSBTTSCEEEEESSCCTT--SCCSEEEESCHHHHHHHHHHHT
T ss_pred hCCEEEEeccCCCccchhhHHHHHhcCCcEEEEcCCCCCC--CCccEEEeCCHHHHHHHHHHHh
Confidence 57899999999988766665 3334578899998753 4679999999999999998875
No 17
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=93.63 E-value=0.053 Score=42.77 Aligned_cols=54 Identities=24% Similarity=0.332 Sum_probs=42.1
Q ss_pred CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHH
Q psy15576 49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVP 102 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp 102 (108)
+.+|+|.+|.|+.+.=.+++ +.-..+|.||.+|..---..+|+.+.+|+.|+++
T Consensus 216 ~aDllLviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t~~~~~~~d~~i~g~a~~vl~ 274 (290)
T 3u31_A 216 KCDLLLVIGTSSTVSTATNLCHFACKKKKKIVEINISKTYITNKMSDYHVCAKFSELTK 274 (290)
T ss_dssp HCSEEEEESCCSCSHHHHHHHHHHHHTTCCEEEEESSCCTTTTTTCSEEEESCGGGHHH
T ss_pred cCCEEEEECcCCcchhHHHHHHHHHHcCCEEEEECCCCCCCCCccceEEEECCHHHHHH
Confidence 56899999999998877766 2334688899998542234689999999999876
No 18
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=84.86 E-value=2.6 Score=34.75 Aligned_cols=58 Identities=10% Similarity=0.100 Sum_probs=40.5
Q ss_pred CcceEEeeccc---hhh-HhhhccCCCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhh
Q psy15576 49 IPELYIAVGIS---GAI-QHLAGMKDSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEK 107 (108)
Q Consensus 49 ~P~lYia~GIS---GA~-QH~~Gm~~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~ 107 (108)
.++|.|.+|-. ... ++..-.. ...+|-|+.|+.-. -+..+|+.+++|+.+++++|+++
T Consensus 289 ~aDlvl~~G~~~~~~~~~~~~~~~~-~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~ 351 (578)
T 3lq1_A 289 TPEVVIRFGSMPVSKPLKNWLEQLS-DIRFYVVDPGAAWKDPIKAVTDMIHCDERFLLDIMQQN 351 (578)
T ss_dssp CCSEEEEESSCCSCHHHHHHHHHCC-SSEEEEECTTCCCCCTTCCCSEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEeCCcccchhHHHHHhcCC-CCEEEEECCCCCcCCCCcCceEEEEeCHHHHHHHHHhh
Confidence 68999999953 333 2332222 34688899998532 23457999999999999999874
No 19
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=84.74 E-value=2.7 Score=34.58 Aligned_cols=57 Identities=21% Similarity=0.265 Sum_probs=38.6
Q ss_pred cceEEeecc---chhhHhhhccCCCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhhC
Q psy15576 50 PELYIAVGI---SGAIQHLAGMKDSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 50 P~lYia~GI---SGA~QH~~Gm~~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~l 108 (108)
+++.|++|- ++...... .....+|-|+.|+.-. =+..+|+.+++|+.+++++|.+++
T Consensus 275 aDlvl~lG~~~~~~~~~~~~--~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 335 (566)
T 1ozh_A 275 ADLVICIGYSPVEYEPAMWN--SGNATLVHIDVLPAYEERNYTPDVELVGDIAGTLNKLAQNI 335 (566)
T ss_dssp CSEEEEESCCGGGSCGGGTC--CSCSEEEEEESSCCCCBTTBCCSEEEESCHHHHHHHHHHTC
T ss_pred CCEEEEECCCCCcCCccccC--CCCCcEEEEeCCHHHhCCCCCCCEEEEeCHHHHHHHHHHhc
Confidence 588999985 33322111 2234688899887532 123479999999999999998653
No 20
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=83.10 E-value=1.4 Score=35.66 Aligned_cols=20 Identities=20% Similarity=0.140 Sum_probs=17.6
Q ss_pred ccCeeEeeeHHHHHHHHHhh
Q psy15576 88 VSDYGLVADLFKAVPELTEK 107 (108)
Q Consensus 88 ~ADygiVgD~~evlp~Li~~ 107 (108)
.+|+.+++|+.+++.+|.+.
T Consensus 309 ~~~~~i~~d~~~~l~~L~~~ 328 (528)
T 1q6z_A 309 PMGDAIVADIGAMASALANL 328 (528)
T ss_dssp SSSEEEESCHHHHHHHHHHH
T ss_pred CCCeeEeCCHHHHHHHHHHH
Confidence 46899999999999999875
No 21
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=81.33 E-value=3.8 Score=33.94 Aligned_cols=60 Identities=18% Similarity=0.113 Sum_probs=41.0
Q ss_pred eCcceEEeeccc---hhh-HhhhccCCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhhC
Q psy15576 48 LIPELYIAVGIS---GAI-QHLAGMKDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 48 V~P~lYia~GIS---GA~-QH~~Gm~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~l 108 (108)
+++++.|++|-. ... ++.....+ ..+|-|+.|+.-.= +..+|+.+++|+.+++.+|++++
T Consensus 308 ~~~Dlvl~iG~~~~~~~~~~~~~~~~~-~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 372 (604)
T 2x7j_A 308 LRPDVVIRFGPMPVSKPVFLWLKDDPT-IQQIVIDEDGGWRDPTQASAHMIHCNASVFAEEIMAGL 372 (604)
T ss_dssp HCCSEEEEESSCCSCHHHHHHHHHCTT-SEEEEECTTCCCCCTTSCCSEEECSCHHHHHHHHHHTS
T ss_pred cCCCEEEEECCcCccHHHHHHHhhCCC-CeEEEECCCCCccCCCccceEEEEcCHHHHHHHHHHhh
Confidence 468999999953 222 23332223 35788999985321 23479999999999999998753
No 22
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=80.92 E-value=2.4 Score=26.91 Aligned_cols=39 Identities=15% Similarity=0.290 Sum_probs=33.7
Q ss_pred ccCeeeCcceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 43 LKASQLIPELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 43 ~SGktV~P~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
..|....|-+||.-=..|++.+.+|++.-|.|++||..+
T Consensus 36 ~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~ 74 (107)
T 3qe1_A 36 INGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVN 74 (107)
T ss_dssp SSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred ccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 356777888889888899999999999999999999754
No 23
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=80.43 E-value=2.7 Score=34.32 Aligned_cols=58 Identities=17% Similarity=0.189 Sum_probs=39.8
Q ss_pred CcceEEeeccchhhHhhhccCCCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhhC
Q psy15576 49 IPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~l 108 (108)
.++|.|++|..=. ...-......+|-|+.|+.-. -....|+.+++|+.+++++|++++
T Consensus 265 ~aDlvl~iG~~~~--~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 323 (549)
T 3eya_A 265 NADTLVLLGTQFP--YRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLV 323 (549)
T ss_dssp HCSEEEEESCCCC--CGGGSCSSSEEEEEESCGGGTTSSSCCSEEEECCHHHHHHHHGGGS
T ss_pred hCCEEEEECCCCC--ccccCCCCCeEEEEeCCHHHhCCCCCCCeEEEeCHHHHHHHHHHhc
Confidence 5788899987522 111233345688898887642 123469999999999999998753
No 24
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=77.90 E-value=4.6 Score=33.15 Aligned_cols=59 Identities=19% Similarity=0.178 Sum_probs=39.3
Q ss_pred CcceEEeeccc--hhhHhhhcc-C-CCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhhC
Q psy15576 49 IPELYIAVGIS--GAIQHLAGM-K-DSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 49 ~P~lYia~GIS--GA~QH~~Gm-~-~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~l 108 (108)
.+++.|++|-. ...+ +... . ....+|-|+.|+.-. =+..+|+.+++|+.+++++|.+.+
T Consensus 287 ~aDlvl~iG~~~~~~~~-~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 350 (573)
T 2iht_A 287 PVDLVLTVGYDYAEDLR-PSMWQKGIEKKTVRISPTVNPIPRVYRPDVDVVTDVLAFVEHFETAT 350 (573)
T ss_dssp TCCEEEEETCCGGGCCC-HHHHCCSSCCEEEEEESSCCSCTTTCCCSEEEESCHHHHHHHHHHHT
T ss_pred hCCEEEEECCCcccccc-ccccCCCCCCeEEEEeCCHHHhCCCcCCCeeEeCCHHHHHHHHHHhc
Confidence 57999999965 2111 1111 1 234688899888532 123579999999999999998653
No 25
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=73.63 E-value=7.4 Score=32.27 Aligned_cols=60 Identities=17% Similarity=0.273 Sum_probs=39.4
Q ss_pred CcceEEeeccchhh-HhhhccCCCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhhC
Q psy15576 49 IPELYIAVGISGAI-QHLAGMKDSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 49 ~P~lYia~GISGA~-QH~~Gm~~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~l 108 (108)
.++|.|++|-.=.. +++.-......+|-|+.|+.-. -...+|+.+++|+.++|++|++++
T Consensus 276 ~aDlvl~iG~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~l 337 (603)
T 4feg_A 276 QADVVLFVGNNYPFAEVSKAFKNTRYFLQIDIDPAKLGKRHKTDIAVLADAQKTLAAILAQV 337 (603)
T ss_dssp HCSEEEEESCCCTTTTTTTTTTTCSEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHTC
T ss_pred hCCEEEEECCCCCcccccccCCCCCeEEEEeCCHHHhCCccCCCEEEEeCHHHHHHHHHHhh
Confidence 47888888864211 2221223334688888887532 123579999999999999998753
No 26
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=72.45 E-value=6.6 Score=32.41 Aligned_cols=59 Identities=17% Similarity=0.210 Sum_probs=35.9
Q ss_pred CcceEEeeccchhhHhh--hccCCCCeEEEecCCCCC-CcccccCeeEeeeHHHHHHHHHhh
Q psy15576 49 IPELYIAVGISGAIQHL--AGMKDSKTIVAINKDPEA-PIFQVSDYGLVADLFKAVPELTEK 107 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~--~Gm~~s~~IIAIN~Dp~A-pIf~~ADygiVgD~~evlp~Li~~ 107 (108)
.+++.|++|-.=..-.+ ........+|-|+.|+.- .=+..+|+.+++|+.+++++|.+.
T Consensus 271 ~aDlvl~iG~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~ 332 (589)
T 2pgn_A 271 AADFVLVLGSRLSDWGIAQGYITKMPKFVHVDTDPAVLGTFYFPLLSVVADAKTFMEQLIEV 332 (589)
T ss_dssp HCSEEEEESCCCCTTTTTTTTTCCCCSEEEEESCGGGTTSSSCCSEEEECCHHHHHHHHHHH
T ss_pred hCCEEEEECCCcccccccccccCCCCeEEEEeCCHHHHCCCcCCCEEEEeCHHHHHHHHHHH
Confidence 36788888853111111 112112357778877742 112357999999999999999764
No 27
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=72.43 E-value=7.5 Score=31.68 Aligned_cols=59 Identities=10% Similarity=0.151 Sum_probs=38.8
Q ss_pred CcceEEeeccchhhHhhhc---cCCCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhh
Q psy15576 49 IPELYIAVGISGAIQHLAG---MKDSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEK 107 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~G---m~~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~ 107 (108)
.++|.|++|-.=..-...| ......+|-|+.||.-. -+..+|+.+++|+.+++.+|++.
T Consensus 270 ~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~ 332 (564)
T 2q28_A 270 NADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAE 332 (564)
T ss_dssp HCSEEEEESCCCSGGGGGGTTTSCTTCEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHH
T ss_pred cCCEEEEECCcccccccccccccCCCCeEEEEeCCHHHhcCCCCCCeEEEcCHHHHHHHHHHH
Confidence 5789999996432111112 22234678899887521 23457999999999999999764
No 28
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=71.49 E-value=7.3 Score=31.79 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=25.0
Q ss_pred eEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhh
Q psy15576 73 TIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEK 107 (108)
Q Consensus 73 ~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~ 107 (108)
.+|-|+.|+.-. -+..+|+.+++|+.+++.+|.++
T Consensus 297 ~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~ 332 (563)
T 2uz1_A 297 QVIQVDPDACELGRLQGIALGIVADVGGTIEALAQA 332 (563)
T ss_dssp EEEEECSCGGGTTSSSCCSEEECSCHHHHHHHHHHH
T ss_pred eEEEEECCHHHhCCCCCCCeEEEcCHHHHHHHHHHh
Confidence 566676666321 12357999999999999999764
No 29
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=69.02 E-value=11 Score=31.05 Aligned_cols=59 Identities=15% Similarity=0.170 Sum_probs=37.1
Q ss_pred CcceEEeeccchhhHhhh---ccCCCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhh
Q psy15576 49 IPELYIAVGISGAIQHLA---GMKDSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEK 107 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~---Gm~~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~ 107 (108)
.+++.|++|-.=....+. .......+|-|+.|+.-. -+..+|+.+++|+.+++.+|.++
T Consensus 278 ~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~ 340 (590)
T 1ybh_A 278 HSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKTPHVSVCGDVKLALQGMNKV 340 (590)
T ss_dssp HCSEEEEESCCCCHHHHSSGGGTTTTSEEEEEESCTTTTTSSSCCSEEEESCHHHHHHHHHHH
T ss_pred hCCEEEEEcCCCCccccCcccccCCCCeEEEEECCHHHhCCCcCCCeEEecCHHHHHHHHHHh
Confidence 368888888531111111 111223578888887531 22357999999999999999764
No 30
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=68.80 E-value=8.7 Score=31.40 Aligned_cols=59 Identities=19% Similarity=0.119 Sum_probs=38.9
Q ss_pred CcceEEeeccchhhHhhhc----cC-CCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhh
Q psy15576 49 IPELYIAVGISGAIQHLAG----MK-DSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEK 107 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~G----m~-~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~ 107 (108)
.+++.|++|-.=..-...| .. ....||-|+.||.-. -+...|+.+++|+.+++.+|++.
T Consensus 272 ~aDlvl~iG~~~~~~~~~~~~~~~~~~~~~ii~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~ 336 (568)
T 2c31_A 272 QCDVCVLIGARLNWLMQHGKGKTWGDELKKYVQIDIQANEMDSNQPIAAPVVGDIKSAVSLLRKA 336 (568)
T ss_dssp HCSEEEEESCCCSGGGGGGCSGGGTTSCCEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHH
T ss_pred cCCEEEEECCCCccccccCcccccCCCCCeEEEEeCCHHHhcCCcCCCceeeCCHHHHHHHHHHh
Confidence 5799999996422111112 22 234678899887532 23356999999999999999764
No 31
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=67.75 E-value=2.7 Score=32.26 Aligned_cols=47 Identities=21% Similarity=0.377 Sum_probs=33.8
Q ss_pred CcceEEeeccchhhHhh-hccCCCC-eEEEecCCCCCCcccccCeeEeee
Q psy15576 49 IPELYIAVGISGAIQHL-AGMKDSK-TIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~-~Gm~~s~-~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
+|+|.|++--||-...+ .-++.++ .+|+|-++ +.|+-+.||+.+.-.
T Consensus 79 ~~dlvI~iS~SG~T~e~l~a~~~aka~viaIT~~-~S~La~~ad~~l~~~ 127 (325)
T 2e5f_A 79 EVELAVGISRSGETTEILLALEKINVKKLGITTR-ESSLTRMCDYSLVVP 127 (325)
T ss_dssp SCSEEEEECSSSCCHHHHHHHHTCCSCEEEEESS-SCHHHHHSSEEEECC
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHhCCCEEEEECC-CCHHHHhcCEEEecC
Confidence 34799999999965443 2333332 56777777 999999999988654
No 32
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=61.31 E-value=8.9 Score=23.82 Aligned_cols=37 Identities=19% Similarity=0.210 Sum_probs=28.8
Q ss_pred CeeeCcceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 45 ASQLIPELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 45 GktV~P~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
+..+.+-++|.-=..|++.+.+|++.-|.|++||..+
T Consensus 32 ~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~ 68 (96)
T 2ego_A 32 EQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLN 68 (96)
T ss_dssp ---CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEE
T ss_pred CCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEE
Confidence 4445556777777789999999999999999999654
No 33
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=59.70 E-value=12 Score=31.01 Aligned_cols=56 Identities=23% Similarity=0.420 Sum_probs=36.9
Q ss_pred CcceEEeeccc------hhhHhhhccCCCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhh
Q psy15576 49 IPELYIAVGIS------GAIQHLAGMKDSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEK 107 (108)
Q Consensus 49 ~P~lYia~GIS------GA~QH~~Gm~~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~ 107 (108)
.+++.|++|-. |...... .+ ..+|-|+.||.-. =...+|+.+++|+.+++.+|++.
T Consensus 293 ~aDlvl~iG~~~~~~~~~~~~~~~--~~-~~~i~id~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~ 355 (616)
T 2pan_A 293 ASDMVFGIGNRFANRHTGSVEKYT--EG-RKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEV 355 (616)
T ss_dssp HCSEEEEESCCCCHHHHSSHHHHH--TT-CEEEEEESCGGGTTSSSCCSSCEECCHHHHHHHHHHH
T ss_pred hCCEEEEECCCCcccccCcccccC--CC-CeEEEEeCCHHHhCCCCCCCeEEEcCHHHHHHHHHHH
Confidence 36889999853 3222221 23 3578888887421 12346899999999999998763
No 34
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=57.85 E-value=11 Score=25.56 Aligned_cols=42 Identities=14% Similarity=0.305 Sum_probs=32.4
Q ss_pred eeeeccCeeeCcceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 39 YISALKASQLIPELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 39 ~igg~SGktV~P~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++| ++-+.....++|.-=..|++.+.+|++.-|.|++||..+
T Consensus 17 ~lG-~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~ 58 (166)
T 1w9e_A 17 KIG-LRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGEN 58 (166)
T ss_dssp CCS-EEEEEETTEEEEEEECTTSHHHHTTCCTTCEEEEETTEE
T ss_pred cEe-EEEEeCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEE
Confidence 444 444445566788777789999999999999999999653
No 35
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=57.77 E-value=7.1 Score=23.75 Aligned_cols=28 Identities=25% Similarity=0.383 Sum_probs=20.7
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
+++.. +.|++.+ +|++.-|.|++||..+
T Consensus 29 ~~v~~-v~~spA~-aGl~~GD~I~~vng~~ 56 (88)
T 3bpu_A 29 QRVKQ-IVDSPRS-RGLKEGDLIVEVNKKN 56 (88)
T ss_dssp EEEEE-CCC--CC-TTCCTTCEEEEETTEE
T ss_pred EEEEE-ecCChhH-hCCCCCCEEEEECCEE
Confidence 45554 5777888 9999999999999753
No 36
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=56.16 E-value=8.9 Score=28.92 Aligned_cols=26 Identities=27% Similarity=0.373 Sum_probs=21.5
Q ss_pred eEEEecCCCCCCcccccCeeEeeeHH
Q psy15576 73 TIVAINKDPEAPIFQVSDYGLVADLF 98 (108)
Q Consensus 73 ~IIAIN~Dp~ApIf~~ADygiVgD~~ 98 (108)
.+|+++.||++|-.++||-.+.-|..
T Consensus 26 ~vv~vd~~~~~~~~~~aD~~~~~~~~ 51 (363)
T 4ffl_A 26 KVVLVDKNPQALIRNYADEFYCFDVI 51 (363)
T ss_dssp EEEEEESCTTCTTTTTSSEEEECCTT
T ss_pred EEEEEeCCCCChhHhhCCEEEECCCC
Confidence 37888999999999999977766643
No 37
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=52.43 E-value=17 Score=21.97 Aligned_cols=29 Identities=10% Similarity=0.353 Sum_probs=25.2
Q ss_pred eEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 52 LYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 52 lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
++|.-=..|++.+-+| ++.-|.|++||.-
T Consensus 29 ~~V~~V~~~spA~~aG~L~~GD~I~~ing~ 58 (90)
T 2q9v_A 29 IYIGHIVPLGAADTDGRLRSGDELISVDGT 58 (90)
T ss_dssp EEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred EEEEEECCCChHHHCCCCCCCCEEEEECCE
Confidence 6676666899999999 9999999999964
No 38
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=50.87 E-value=4 Score=31.53 Aligned_cols=48 Identities=17% Similarity=0.145 Sum_probs=35.4
Q ss_pred cceEEeeccchhhHhhhc-cCC---CC-eEEEecCCCCCCcccccCeeEeeeH
Q psy15576 50 PELYIAVGISGAIQHLAG-MKD---SK-TIVAINKDPEAPIFQVSDYGLVADL 97 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~---s~-~IIAIN~Dp~ApIf~~ADygiVgD~ 97 (108)
|++.|++--||-..-+.- ++. .+ .+|+|-++++.|+-+.||+.+.-..
T Consensus 101 ~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~La~~ad~~l~~~~ 153 (342)
T 1j5x_A 101 RGLAFLFSRTGNTTEVLLANDVLKKRNHRTIGITIEEESRLAKESDLPLVFPV 153 (342)
T ss_dssp SEEEEEECSSSCCHHHHHHHHHHHHTTEEEEEEESCTTSHHHHHSSEEEECCC
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHhcCEEEEcCC
Confidence 469999999996544322 211 12 6889999999999999999886543
No 39
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.55 E-value=10 Score=23.40 Aligned_cols=33 Identities=27% Similarity=0.243 Sum_probs=27.1
Q ss_pred CcceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 49 IPELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
...++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 31 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~ 63 (94)
T 2eeg_A 31 SAPLTISRVHAGSKAALAALCPGDLIQAINGES 63 (94)
T ss_dssp TSCCEECCCCSSSHHHHTTCCTTCEEEEETTEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 445677666788999999999999999999643
No 40
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=49.93 E-value=31 Score=28.17 Aligned_cols=56 Identities=11% Similarity=0.038 Sum_probs=37.7
Q ss_pred CcceEEeeccch---hh-HhhhccCCCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHH
Q psy15576 49 IPELYIAVGISG---AI-QHLAGMKDSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELT 105 (108)
Q Consensus 49 ~P~lYia~GISG---A~-QH~~Gm~~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li 105 (108)
.++|.|++|-.= .. ++..-... +.+|-|+.||.-. -...+|+.+++|+.+++.+|.
T Consensus 278 ~aDlvl~iG~~~~~~~~~~~~~~~~~-~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~l~ 338 (556)
T 3hww_A 278 QAQIVVQLGSSLTGKRLLQWQASCEP-EEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHP 338 (556)
T ss_dssp TCSEEEEESBCCCCHHHHHHHHHCCC-SEEEEEESSCSCCCTTCCSEEEEESCHHHHHHHSC
T ss_pred CCCEEEEcCCCcccHHHHHHHhcCCC-CeEEEECCCCccCCCCCCceEEEEcCHHHHHHhcc
Confidence 688999999642 11 22222333 3688898887532 234579999999999998764
No 41
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=49.75 E-value=21 Score=21.60 Aligned_cols=32 Identities=22% Similarity=0.312 Sum_probs=26.6
Q ss_pred cceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
+-++|.-=..|++.+.+|++.-|.|++||..+
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~ 58 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGEN 58 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEE
Confidence 45666666789999999999999999999754
No 42
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=49.37 E-value=20 Score=22.00 Aligned_cols=35 Identities=14% Similarity=0.288 Sum_probs=28.2
Q ss_pred eeCcceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 47 QLIPELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 47 tV~P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
.+...+||.-=..|++...+| ++.-|.|++||..+
T Consensus 18 ~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~ 53 (88)
T 3e17_A 18 RLGSQIFVKEMTRTGLATKDGNLHEGDIILKINGTV 53 (88)
T ss_dssp EEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEE
T ss_pred EEeCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 333457777777899999999 99999999999653
No 43
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=48.75 E-value=23 Score=21.17 Aligned_cols=31 Identities=26% Similarity=0.261 Sum_probs=25.9
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+| ++.-|.|++||..+
T Consensus 26 ~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~ 57 (85)
T 2i04_A 26 FLQIKSLVLDGPAALDGKMETGDVIVSVNDTC 57 (85)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEE
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEE
Confidence 36676667889999999 99999999999753
No 44
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=46.78 E-value=25 Score=20.36 Aligned_cols=30 Identities=10% Similarity=0.298 Sum_probs=23.4
Q ss_pred eEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+| ++.-|.|++||..+
T Consensus 23 v~V~~v~~~s~A~~aG~l~~GD~I~~ing~~ 53 (81)
T 2rcz_A 23 IFVKEISQDSLAARDGNIQEGDVVLKINGTV 53 (81)
T ss_dssp EEEEEECTTSHHHHHSSCCTTCEEEEETTEE
T ss_pred EEEEEECCCChHHHCCCCCCCCEEEEECCEE
Confidence 4444445678888899 99999999999743
No 45
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=46.69 E-value=19 Score=21.98 Aligned_cols=30 Identities=23% Similarity=0.396 Sum_probs=25.4
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+|++.-|.|++||..+
T Consensus 26 ~~V~~V~~~spA~~aGl~~GD~I~~vng~~ 55 (91)
T 2f5y_A 26 VRVQAVDSGGPAERAGLQQLDTVLQLNERP 55 (91)
T ss_dssp CEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred EEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 566666778999999999999999999753
No 46
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=46.39 E-value=22 Score=22.43 Aligned_cols=31 Identities=16% Similarity=0.294 Sum_probs=26.3
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 46 gv~V~~V~~~spA~~aGl~~GD~I~~vng~~ 76 (109)
T 1q3o_A 46 LQYLESVDEGGVAWRAGLRMGDFLIEVNGQN 76 (109)
T ss_dssp SEEEEEECTTSHHHHTTCCTTCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 4677766789999999999999999999753
No 47
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=46.14 E-value=17 Score=21.87 Aligned_cols=31 Identities=16% Similarity=0.139 Sum_probs=25.4
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+.+|++.-|.|++||..+
T Consensus 28 ~~~V~~V~~~spA~~aGl~~GD~I~~ing~~ 58 (88)
T 2uzc_A 28 PLTISSLKDGGKAAQANVRIGDVVLSIDGIN 58 (88)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTEE
T ss_pred CeEEEEECCCChHHHcCCCCCCEEEEECCEE
Confidence 4566655678899999999999999999753
No 48
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=45.33 E-value=26 Score=21.56 Aligned_cols=31 Identities=16% Similarity=0.180 Sum_probs=25.7
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 34 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~ 64 (98)
T 2jxo_A 34 GQFIRSVDPDSPAEASGLRAQDRIVEVNGVC 64 (98)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 4666655678999999999999999999743
No 49
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=44.91 E-value=27 Score=22.48 Aligned_cols=50 Identities=18% Similarity=0.201 Sum_probs=33.0
Q ss_pred CcceEEeeccchhhHhhhccCCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhh
Q psy15576 49 IPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~ 107 (108)
.|+=.+++|=|- .-+.+.+.+++=|++++.++ .||| ++.|..|++. +++.
T Consensus 149 ~~~~~i~iGD~~--~Di~~~~~ag~~v~~~~~~~-----~ad~-v~~~~~el~~-~l~~ 198 (201)
T 4ap9_A 149 RDGFILAMGDGY--ADAKMFERADMGIAVGREIP-----GADL-LVKDLKELVD-FIKN 198 (201)
T ss_dssp TTSCEEEEECTT--CCHHHHHHCSEEEEESSCCT-----TCSE-EESSHHHHHH-HHHT
T ss_pred CcCcEEEEeCCH--HHHHHHHhCCceEEECCCCc-----cccE-EEccHHHHHH-HHHH
Confidence 566667777553 44555566666688887776 8887 4578888544 4443
No 50
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=44.76 E-value=26 Score=21.05 Aligned_cols=32 Identities=9% Similarity=0.288 Sum_probs=24.6
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
..++|.-=..|++.+.+| ++.-|.|++||.-+
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~ 55 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTV 55 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEE
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEE
Confidence 344555445688889999 99999999999643
No 51
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=44.67 E-value=20 Score=21.81 Aligned_cols=31 Identities=26% Similarity=0.300 Sum_probs=26.3
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+.+|++.-|.|++||..+
T Consensus 30 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~ 60 (95)
T 3r68_A 30 GQIIKDIEPGSPAEAAGLKNNDLVVAVNGKS 60 (95)
T ss_dssp SEEEECCCTTSHHHHHTCCTTEEEEEETTEE
T ss_pred CEEEEEECCCCHHHHCCCCCCCEEEEECCEE
Confidence 5667666789999999999999999999654
No 52
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=44.01 E-value=22 Score=21.98 Aligned_cols=32 Identities=19% Similarity=0.455 Sum_probs=27.3
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
+-+||.-=..|++...+| ++.-|.|++||..+
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~ 67 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVD 67 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEE
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEE
Confidence 467777777899999999 99999999999644
No 53
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=43.99 E-value=28 Score=21.02 Aligned_cols=31 Identities=16% Similarity=0.304 Sum_probs=25.8
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 29 gv~V~~V~~~spA~~aGl~~GD~I~~ing~~ 59 (90)
T 2he4_A 29 GQYIRSVDPGSPAARSGLRAQDRLIEVNGQN 59 (90)
T ss_dssp SEEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred CEEEEEECCCChHHHCCCCCCCEEEEECCEE
Confidence 4666665678999999999999999999754
No 54
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=43.86 E-value=20 Score=21.73 Aligned_cols=31 Identities=16% Similarity=0.258 Sum_probs=25.5
Q ss_pred cceEEeeccchhhHhhhccCCCCeEEEecCC
Q psy15576 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKD 80 (108)
Q Consensus 50 P~lYia~GISGA~QH~~Gm~~s~~IIAIN~D 80 (108)
..++|.-=..|++.+.+|++.-|.|++||.-
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~ 62 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKPYDRLLQVNHV 62 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCE
Confidence 3456666567889999999999999999964
No 55
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=43.42 E-value=24 Score=21.80 Aligned_cols=30 Identities=17% Similarity=0.271 Sum_probs=25.7
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
.++|.-=..|++.+.+| ++.-|.|++||.-
T Consensus 40 g~~V~~V~~~spA~~aG~l~~GD~I~~ing~ 70 (103)
T 2fcf_A 40 GIFIKHVLEDSPAGKNGTLKPGDRIVEVDGM 70 (103)
T ss_dssp -EEEEEECSSSHHHHHCCCCTTCEEEEETTE
T ss_pred CEEEEEeCCCCcHHHcCCCCCCCEEEEECCE
Confidence 57777767899999999 9999999999964
No 56
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=43.39 E-value=20 Score=21.68 Aligned_cols=31 Identities=19% Similarity=0.218 Sum_probs=25.4
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 28 ~v~V~~V~~~spA~~aGl~~GD~I~~ing~~ 58 (89)
T 2q3g_A 28 PLSISRLTPGGKAAQAGVAVGDWVLSIDGEN 58 (89)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 3566655678899999999999999999754
No 57
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=42.63 E-value=31 Score=21.05 Aligned_cols=32 Identities=16% Similarity=0.264 Sum_probs=26.7
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
+.++|.-=..|++.+.+| ++.-|.|++||..+
T Consensus 28 ~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~ 60 (93)
T 3o46_A 28 GAIIVARIMRGGAADRSGLIHVGDELREVNGIP 60 (93)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEEEEETTEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 456777667899999999 99999999999643
No 58
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=42.55 E-value=36 Score=20.45 Aligned_cols=32 Identities=22% Similarity=0.433 Sum_probs=25.1
Q ss_pred cceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
+.++|.-=..|++.+-+|++.-|.|++||.-+
T Consensus 28 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~ 59 (90)
T 2eaq_A 28 PGIFVASVEAGSPAEFSQLQVDDEIIAINNTK 59 (90)
T ss_dssp TEEEEEEECTTSHHHHTTCCTTCEEEEETTEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEE
Confidence 34555544568899999999999999999754
No 59
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=42.47 E-value=24 Score=21.70 Aligned_cols=31 Identities=23% Similarity=0.355 Sum_probs=25.4
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+.+| ++.-|.|++||.-+
T Consensus 31 ~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~ 62 (97)
T 1n7e_A 31 PIIISSLTKGGLAERTGAIHIGDRILAINSSS 62 (97)
T ss_dssp CCEEEEECTTSHHHHHTCCCTTCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEE
Confidence 35666556789999999 99999999999743
No 60
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=42.39 E-value=27 Score=22.66 Aligned_cols=33 Identities=24% Similarity=0.364 Sum_probs=28.5
Q ss_pred CcceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 49 IPELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
.+-+||.-=..|++.+.+| ++.-|.|++||..+
T Consensus 44 ~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~ 77 (125)
T 3hpk_A 44 CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRS 77 (125)
T ss_dssp CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEE
T ss_pred CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEE
Confidence 3567888778999999999 99999999999654
No 61
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=42.20 E-value=28 Score=21.29 Aligned_cols=30 Identities=13% Similarity=0.217 Sum_probs=25.7
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
.++|.-=..|++.+.+| ++.-|.|++||.-
T Consensus 33 ~~~V~~V~~~spA~~aG~l~~GD~I~~ing~ 63 (97)
T 2jil_A 33 PVVITSVRPGGPADREGTIKPGDRLLSVDGI 63 (97)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCE
Confidence 46676667899999999 9999999999964
No 62
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=41.59 E-value=21 Score=21.23 Aligned_cols=30 Identities=20% Similarity=0.193 Sum_probs=24.1
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+|++.-|.|++||..+
T Consensus 27 v~V~~V~~~spA~~aGl~~GD~I~~vng~~ 56 (85)
T 1rgw_A 27 LTISRITPGSKAAQSQLSQGDLVVAIDGVN 56 (85)
T ss_dssp CBEEEECTTSHHHHSSCCCCSBEEEETTEE
T ss_pred eEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 455554568888889999999999999754
No 63
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=41.25 E-value=33 Score=21.20 Aligned_cols=31 Identities=19% Similarity=0.443 Sum_probs=26.0
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
+-+||.-=..|++.+.+| ++.-|.|++||.-
T Consensus 34 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~ 65 (102)
T 2i1n_A 34 PGIFITKIIPGGAAAMDGRLGVNDCVLRVNEV 65 (102)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCE
Confidence 356676667899999999 9999999999963
No 64
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=41.16 E-value=26 Score=21.40 Aligned_cols=32 Identities=22% Similarity=0.460 Sum_probs=26.4
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
+-++|.-=..|++.+.+| ++.-|.|++||.-+
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~ 61 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHD 61 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEE
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEE
Confidence 456776666799999999 99999999999643
No 65
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=41.08 E-value=26 Score=23.40 Aligned_cols=29 Identities=7% Similarity=0.109 Sum_probs=22.3
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.. +|++.-|.|++||.-+
T Consensus 59 ~~V~~V~~~spA~-aGL~~GD~I~~inG~~ 87 (134)
T 2l97_A 59 VIVRSVQSNMPAN-GHLEKYDVITKVDDKE 87 (134)
T ss_dssp EEEEECSTTSGGG-TTSCSSCEEEEETTEE
T ss_pred EEEEEECCCCchH-HCCCCCCEEEEECCEE
Confidence 4444445678888 9999999999999654
No 66
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=41.01 E-value=11 Score=28.80 Aligned_cols=45 Identities=11% Similarity=0.292 Sum_probs=35.7
Q ss_pred ceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 51 ELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
++.|++--||-...+.+. +++ .+|+|-.+++.|+.+.||+.+.-.
T Consensus 142 DvvI~IS~SG~T~~vi~al~~Ak~~Ga-~~IaIT~~~~S~La~~AD~~I~~~ 192 (306)
T 1nri_A 142 DVLVGIAASGRTPYVIAGLQYAKSLGA-LTISIASNPKSEMAEIADIAIETI 192 (306)
T ss_dssp SEEEEECTTSCCHHHHHHHHHHHHHTC-EEEEEESSTTCHHHHHSSEEEECC
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEECCCCChHHHhCCEEEEcC
Confidence 888999999977666544 234 478999999999999999988654
No 67
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=40.85 E-value=26 Score=21.44 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=25.5
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 31 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~ 61 (96)
T 2v90_A 31 GQFLWEVDPGLPAKKAGMQAGDRLVAVAGES 61 (96)
T ss_dssp EEEEEEECTTSHHHHTTCCTTEEEEEETTEE
T ss_pred CeEEEEECCCChHHHcCCCCCCEEEEECCEE
Confidence 3566555679999999999999999999743
No 68
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=40.44 E-value=31 Score=20.86 Aligned_cols=31 Identities=26% Similarity=0.246 Sum_probs=25.5
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+-+|++.-|.|++||.-+
T Consensus 28 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~ 58 (91)
T 2pkt_A 28 PLAISRVTPGSKAALANLCIGDVITAIDGEN 58 (91)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTEE
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 4566655678999999999999999999643
No 69
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=40.00 E-value=31 Score=22.37 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=26.9
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
+.++|.-=..|++...+| ++.-|.|++||..
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~ 81 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGR 81 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCE
Confidence 347787778899999999 9999999999964
No 70
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=39.95 E-value=46 Score=27.39 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=24.8
Q ss_pred eEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhh
Q psy15576 73 TIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEK 107 (108)
Q Consensus 73 ~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~ 107 (108)
.+|-|+.|+.-. -+...|+.+++|+.+++.+|.+.
T Consensus 294 ~~i~id~d~~~~~~~~~~~~~i~gd~~~~l~~L~~~ 329 (590)
T 1v5e_A 294 NFIQIDIDPAMLGKRHHADVAILGDAALAIDEILNK 329 (590)
T ss_dssp EEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHH
T ss_pred eEEEEeCCHHHHCCCcCCCeEEEcCHHHHHHHHHHh
Confidence 456666665321 12347899999999999999865
No 71
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=39.91 E-value=23 Score=21.27 Aligned_cols=31 Identities=19% Similarity=0.230 Sum_probs=24.8
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+-+|++.-|.|++||.-+
T Consensus 27 g~~V~~V~~~spA~~aGL~~GD~I~~ing~~ 57 (87)
T 2pa1_A 27 PIMVTKVAERGKAKDADLRPGDIIVAINGES 57 (87)
T ss_dssp EEEEEEECSSSHHHHTTCCTTCEEEEETTEE
T ss_pred CEEEEEECCCChHHHcCCCCCCEEEEECCEE
Confidence 4555555668888999999999999999753
No 72
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=39.69 E-value=30 Score=21.76 Aligned_cols=31 Identities=13% Similarity=0.268 Sum_probs=25.8
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+| ++.-|.|++||.-+
T Consensus 40 g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~ 71 (111)
T 2koj_A 40 PIYVKNILPRGAAIQDGRLKAGDRLIEVNGVD 71 (111)
T ss_dssp CEEEEEECSSSHHHHHCSSCTTCEEEEETTEE
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEE
Confidence 46666666789999999 99999999999643
No 73
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=39.46 E-value=33 Score=20.74 Aligned_cols=30 Identities=23% Similarity=0.454 Sum_probs=24.5
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
-++|.-=..|++.+.+| ++.-|.|++||..
T Consensus 34 gv~V~~V~~~spA~~aG~l~~GD~I~~vng~ 64 (94)
T 2fe5_A 34 SIYITKIIEGGAAQKDGRLQIGDRLLAVNNT 64 (94)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCE
Confidence 35555556788999999 9999999999974
No 74
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=38.94 E-value=15 Score=28.46 Aligned_cols=47 Identities=23% Similarity=0.253 Sum_probs=35.1
Q ss_pred CcceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 49 IPELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
+.+|.|++--||-...+.-. +++ .+|+|-++++.|+-+.||+.+.-.
T Consensus 90 ~~dl~i~iS~SG~T~e~~~a~~~ak~~g~-~~i~IT~~~~S~la~~ad~~l~~~ 142 (334)
T 3hba_A 90 AGGLVIVISQSGRSPDILAQARMAKNAGA-FCVALVNDETAPIKDIVDVVIPLR 142 (334)
T ss_dssp TTCEEEEEESSSCCHHHHHHHHHHHHTTC-EEEEEESCTTSGGGGTSSEEEECC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHcCC-cEEEEeCCCCChHHHhcCEeeeec
Confidence 55899999999954333211 244 578999999999999999998654
No 75
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=38.49 E-value=33 Score=21.20 Aligned_cols=30 Identities=17% Similarity=0.481 Sum_probs=25.2
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+|++.-|.|++||..+
T Consensus 37 ~~V~~V~~~spA~~aGL~~GD~I~~ing~~ 66 (101)
T 1uez_A 37 IYVSLVEPGSLAEKEGLRVGDQILRVNDKS 66 (101)
T ss_dssp EEEEEECTTSHHHHHTCCSSCCEEEETTEE
T ss_pred EEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 566655678999999999999999999753
No 76
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=38.43 E-value=31 Score=21.00 Aligned_cols=31 Identities=16% Similarity=0.342 Sum_probs=25.3
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+| ++.-|.|++||..+
T Consensus 34 g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~ 65 (96)
T 1d5g_A 34 GIYVKAVIPQGAAESDGRIHKGDRVLAVNGVS 65 (96)
T ss_dssp CCEEEEECTTSHHHHTTCCCTTCEEEEETTEE
T ss_pred CEEEEEeCCCChHHHcCCCCCCCEEEEECCEE
Confidence 45665556788999999 99999999999643
No 77
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=38.41 E-value=34 Score=21.16 Aligned_cols=31 Identities=19% Similarity=0.323 Sum_probs=26.2
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-+||.-=..|++.+.+|++.-|.|++||..+
T Consensus 46 gv~V~~V~~~spA~~aGl~~GD~I~~ing~~ 76 (104)
T 3sfj_A 46 GIYVTRVSEGGPAEIAGLQIGDKIMQVNGWD 76 (104)
T ss_dssp SEEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred CEEEEEECCCChHHHcCCCCCCEEEEECCEE
Confidence 3677666789999999999999999999654
No 78
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=38.31 E-value=7.4 Score=31.01 Aligned_cols=30 Identities=33% Similarity=0.515 Sum_probs=20.8
Q ss_pred Eeeccch--hhHhh--hccCCCCeEEEecCCCCCC
Q psy15576 54 IAVGISG--AIQHL--AGMKDSKTIVAINKDPEAP 84 (108)
Q Consensus 54 ia~GISG--A~QH~--~Gm~~s~~IIAIN~Dp~Ap 84 (108)
|.+|=.| +++|| .|+++.++ ||+|+|+++=
T Consensus 13 iGvGg~G~n~vn~m~~~~~~gv~~-ia~NTD~q~L 46 (338)
T 2r75_1 13 IGVGGGGSNAVNRMYEDGIEGVEL-YAINTDVQHL 46 (338)
T ss_dssp EEEHHHHHHHHHHHHHTTCCSCEE-EEEESBHHHH
T ss_pred EeeCccHHHHHHHHHHhCCCCceE-EEEECCHHHH
Confidence 3444444 78886 57777775 7999998753
No 79
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=38.19 E-value=28 Score=21.66 Aligned_cols=30 Identities=27% Similarity=0.230 Sum_probs=24.8
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 28 ~~V~~V~~~spA~~aGl~~GD~I~~ing~~ 57 (106)
T 3ngh_A 28 HLIRVIEEGSPAEKAGLLDGDRVLRINGVF 57 (106)
T ss_dssp CEEECCCTTSHHHHTTCCTTCEEEEETTEE
T ss_pred EEEEEeCCCCHHHHcCCCCCCEEEEECCEE
Confidence 556555678999999999999999999644
No 80
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=38.18 E-value=31 Score=20.83 Aligned_cols=31 Identities=13% Similarity=0.210 Sum_probs=25.8
Q ss_pred ceEEeeccchhhHhhh-ccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLA-GMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~-Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+ |++.-|.|++||.-+
T Consensus 31 g~~V~~V~~~spA~~aggl~~GD~I~~ing~~ 62 (90)
T 1qav_A 31 PILISKIFKGLAADQTEALFVGDAILSVNGED 62 (90)
T ss_dssp EEEEEEECTTSHHHHTTCCCTTEEEEEETTEE
T ss_pred CEEEEEECCCCHHHhcCCCCCCCEEEEECCEE
Confidence 4667666788999998 999999999999643
No 81
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=37.66 E-value=25 Score=21.70 Aligned_cols=30 Identities=23% Similarity=0.341 Sum_probs=25.1
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
.++|.-=..|++.+.+| ++.-|.|++||.-
T Consensus 37 ~~~V~~V~~~spA~~aG~l~~GD~I~~vng~ 67 (103)
T 1wfv_A 37 DLYVLRLAEDGPAIRNGRMRVGDQIIEINGE 67 (103)
T ss_dssp EEECCCBCTTSHHHHHCSSCTTCEEEEETTE
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCE
Confidence 46666556789999999 9999999999974
No 82
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=37.60 E-value=37 Score=20.49 Aligned_cols=32 Identities=16% Similarity=0.404 Sum_probs=26.2
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
+-++|.-=..|++.+.+| ++.-|.|++||.-+
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~ 61 (92)
T 2qg1_A 29 TGVFVSDIVKGGIADADGRLMQGDQILMVNGED 61 (92)
T ss_dssp CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 346666666889999999 99999999999643
No 83
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=37.34 E-value=41 Score=20.22 Aligned_cols=31 Identities=10% Similarity=0.235 Sum_probs=24.4
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+| ++.-|.|++||.-+
T Consensus 34 ~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~ 65 (97)
T 2iwn_A 34 GIFVKSITKSSAVEHDGRIQIGDQIIAVDGTN 65 (97)
T ss_dssp CCEEEEECTTCHHHHHCCCCTTCEEEEETTEE
T ss_pred CEEEEEeCCCChHHhCCCCCCCCEEEEECCEE
Confidence 35555445688889999 99999999999643
No 84
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=37.29 E-value=24 Score=21.47 Aligned_cols=31 Identities=26% Similarity=0.378 Sum_probs=24.4
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+-+|++.-|.|++||..+
T Consensus 28 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~ 58 (91)
T 2vsp_A 28 GSFIKEVQKGGPADLAGLEDEDVIIEVNGVN 58 (91)
T ss_dssp CCBC-CCCTTSHHHHTTCCTTCEEEEETTEE
T ss_pred CeEEEEECCCChHHHcCCCCCCEEEEECCEE
Confidence 3455555678999999999999999999754
No 85
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=36.70 E-value=21 Score=22.33 Aligned_cols=30 Identities=23% Similarity=0.396 Sum_probs=24.3
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+|++.-|.|++||..+
T Consensus 38 ~~V~~V~~~spA~~aGL~~GD~I~~vng~~ 67 (100)
T 1whd_A 38 VRVQAVDSGGPAERAGLQQLDTVLQLNERP 67 (100)
T ss_dssp CBCCBCCTTSHHHHHTCCSSCEEEEETTEE
T ss_pred EEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 555555678889999999999999999753
No 86
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=36.63 E-value=27 Score=21.78 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=26.8
Q ss_pred cceEEeeccchhhHhhhc--cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG--MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G--m~~s~~IIAIN~Dp 81 (108)
+-++|.-=..|++.+.+| ++.-|.|++||..+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~ 76 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRD 76 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEE
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEE
Confidence 347777667889999999 99999999999653
No 87
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=36.51 E-value=23 Score=22.22 Aligned_cols=29 Identities=24% Similarity=0.394 Sum_probs=23.5
Q ss_pred EEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 53 YIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 53 Yia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
+|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 34 ~V~~V~~~spA~~aGL~~GD~Il~Ing~~ 62 (90)
T 1y7n_A 34 IICSLMRGGIAERGGVRVGHRIIEINGQS 62 (90)
T ss_dssp EEEEECTTSHHHHHTCCSSCEEEEETTEE
T ss_pred EEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 45444568899999999999999999653
No 88
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=36.30 E-value=19 Score=25.86 Aligned_cols=45 Identities=20% Similarity=0.417 Sum_probs=34.8
Q ss_pred ceEEeeccchhhHhhhcc--------CCCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 51 ELYIAVGISGAIQHLAGM--------KDSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm--------~~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
++.|++--||-...+.-. +++ .||+|-.+++.|+.+.||+.+.-.
T Consensus 108 DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga-~vI~IT~~~~s~La~~aD~~l~~~ 160 (220)
T 3etn_A 108 DLLLLISNSGKTREIVELTQLAHNLNPGL-KFIVITGNPDSPLASESDVCLSTG 160 (220)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHHCTTC-EEEEEESCTTSHHHHHSSEEEECC
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHhcCCCC-eEEEEECCCCChhHHhCCEEEEcC
Confidence 788999999976554321 445 478898899999999999988753
No 89
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=36.02 E-value=41 Score=21.63 Aligned_cols=31 Identities=16% Similarity=0.180 Sum_probs=26.2
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 34 gv~V~~V~~~spA~~aGl~~GD~I~~ing~~ 64 (128)
T 2kjd_A 34 GQFIRSVDPDSPAEASGLRAQDRIVEVNGVC 64 (128)
T ss_dssp SEEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred CEEEEEeCCCChHHHcCCCCCCEEEEECCEE
Confidence 4667666789999999999999999999743
No 90
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.91 E-value=47 Score=20.53 Aligned_cols=31 Identities=16% Similarity=0.228 Sum_probs=25.5
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 37 gv~V~~V~~~spA~~aGL~~GD~I~~ing~~ 67 (100)
T 2eeh_A 37 GIFVSKVEEGSSAERAGLCVGDKITEVNGLS 67 (100)
T ss_dssp CEEEEEECTTSHHHHHTCCSSCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 4666655678999999999999999999654
No 91
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=35.88 E-value=37 Score=21.16 Aligned_cols=32 Identities=22% Similarity=0.243 Sum_probs=26.0
Q ss_pred cceEEeeccchhhHhh-hccCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHL-AGMKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~-~Gm~~s~~IIAIN~Dp 81 (108)
|.++|.-=+.|++.+. +|++--|.|++||..+
T Consensus 37 ~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~ 69 (101)
T 2yt7_A 37 PTAVIANLLHGGPAERSGALSIGDRLTAINGTS 69 (101)
T ss_dssp CCEEEEEECTTSTTGGGSSCCTTCEEEEESSCB
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 4577777778888888 6799999999999654
No 92
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.88 E-value=32 Score=21.31 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=25.0
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
.++|.-=..|++.+.+| ++.-|.|++||..
T Consensus 39 ~v~V~~V~~~spA~~aG~l~~GD~I~~vng~ 69 (104)
T 2djt_A 39 PLAVRGLLKDGPAQRCGRLEVGDLVLHINGE 69 (104)
T ss_dssp CCEEEEECTTCHHHHHCSCCTTCBEEEETTE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCE
Confidence 35665556789999999 9999999999974
No 93
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=35.69 E-value=40 Score=20.44 Aligned_cols=31 Identities=13% Similarity=0.200 Sum_probs=24.6
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 35 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~ 65 (97)
T 2w4f_A 35 GIFISRVSEEGPAARAGVRVGDKLLEVNGVA 65 (97)
T ss_dssp SEEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred CEEEEEECCCChHHHcCCCCCCEEEEECCEE
Confidence 3555544568899999999999999999643
No 94
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=35.52 E-value=43 Score=20.40 Aligned_cols=30 Identities=13% Similarity=0.101 Sum_probs=24.9
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
-++|.-=..|++...+| ++.-|.|++||.-
T Consensus 31 gv~V~~V~~~spA~~aG~l~~GD~I~~vng~ 61 (98)
T 2opg_A 31 AIIIHEVYEEGAACKDGRLWAGDQILEVNGI 61 (98)
T ss_dssp SEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CEEEEEECCCChHHhCCCCCCCCEEEEECCE
Confidence 45666556788999999 9999999999964
No 95
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=35.48 E-value=7.4 Score=32.39 Aligned_cols=36 Identities=28% Similarity=0.541 Sum_probs=24.4
Q ss_pred Eeeccch----hhHhh--hccCCCCeEEEecCCCCCCcccccC
Q psy15576 54 IAVGISG----AIQHL--AGMKDSKTIVAINKDPEAPIFQVSD 90 (108)
Q Consensus 54 ia~GISG----A~QH~--~Gm~~s~~IIAIN~Dp~ApIf~~AD 90 (108)
--+||.| +++|| .|+++.++ ||+|+|.+|=-..-|+
T Consensus 21 kVIGVGG~G~NaVn~m~~~~~~gvef-iaiNTD~qaL~~s~a~ 62 (396)
T 4dxd_A 21 KVIGVGGGGNNAVNRMIDHGMNNVEF-IAINTDGQALNLSKAE 62 (396)
T ss_dssp EEEEEHHHHHHHHHHHHHHCCCSEEE-EEEESCHHHHHTCCCS
T ss_pred EEEEECCcHHHHHHHHHHhCCCCceE-EEEECCHHHHhcCCCc
Confidence 3456665 48888 58888875 8999997654433343
No 96
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=35.44 E-value=37 Score=21.40 Aligned_cols=31 Identities=13% Similarity=0.370 Sum_probs=25.8
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-+||.-=..|++.+.+| ++.-|.|++||..+
T Consensus 36 g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~ 67 (113)
T 2g5m_B 36 GIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTS 67 (113)
T ss_dssp EEEEEECCTTSHHHHHTCSCTTCBEEEETTEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 46666666799999999 99999999999654
No 97
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=35.41 E-value=17 Score=21.70 Aligned_cols=30 Identities=17% Similarity=0.357 Sum_probs=24.3
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 25 ~~V~~V~~~spA~~aGl~~GD~I~~ing~~ 54 (83)
T 2kv8_A 25 CVLSCVMRGSPADFVGLRAGDQILAVNEIN 54 (83)
T ss_dssp CBCCBCCTTSTTTTTTCCTTCEEEEETTEE
T ss_pred eEEEEeCCCChHHHcCCCCCCEEEEECCEE
Confidence 455555678899999999999999999753
No 98
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=35.19 E-value=29 Score=26.94 Aligned_cols=47 Identities=23% Similarity=0.236 Sum_probs=35.9
Q ss_pred CcceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 49 IPELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
+.+|.|++--||-..-+.-. +++ .+|+|-++++.|+-+.||+.+.-.
T Consensus 82 ~~dlvI~iS~SG~T~e~l~a~~~ak~~ga-~~iaIT~~~~S~La~~aD~~l~~~ 134 (352)
T 3g68_A 82 ENTLVVGVSQGGSSYSTYNAMKLAEDKGC-KIASMAGCKNALIDEISDYILTVN 134 (352)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHTTC-EEEEEESSTTCGGGGGCSEECCCC
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHHCCC-CEEEEeCCCCChHHHhCCEEEEeC
Confidence 56899999999955443322 244 588999999999999999988654
No 99
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=35.05 E-value=37 Score=21.64 Aligned_cols=31 Identities=19% Similarity=0.477 Sum_probs=26.0
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
+.++|.-=..|++.+.+| ++.-|.|++||.-
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~ 69 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGV 69 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCE
Confidence 346676667889999999 9999999999964
No 100
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=34.89 E-value=25 Score=21.24 Aligned_cols=23 Identities=22% Similarity=0.486 Sum_probs=19.5
Q ss_pred chhhHhhhccCCCCeEEEecCCC
Q psy15576 59 SGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 59 SGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
.|++.+.+|++.-|.|++||..+
T Consensus 13 ~~spA~~aGl~~GD~I~~ing~~ 35 (91)
T 2zpm_A 13 PNSAASXAGLQAGDRIVXVDGQP 35 (91)
T ss_dssp TTSHHHHTTCCTTCEEEEETTEE
T ss_pred CCChHHhcCCCCCCEEEEECCeE
Confidence 46778889999999999999743
No 101
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=34.51 E-value=35 Score=21.14 Aligned_cols=31 Identities=26% Similarity=0.300 Sum_probs=25.6
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 31 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~ 61 (102)
T 2d90_A 31 GQIIKDIEPGSPAEAAGLKNNDLVVAVNGKS 61 (102)
T ss_dssp SEEEECCCTTSTTTTTTCCTTCEEEEESSCB
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 3566655678999999999999999999754
No 102
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=34.25 E-value=40 Score=21.51 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=25.9
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
+-++|.-=..|++.+.+| ++.-|.|++||.-
T Consensus 49 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~ 80 (112)
T 2r4h_A 49 MDLYVLRLAEDGPAERSGKMRIGDEILEINGE 80 (112)
T ss_dssp CCEEEEEECTTSHHHHTTCCCTTCEEEEETTE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCE
Confidence 346676666889999999 9999999999964
No 103
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=34.25 E-value=41 Score=21.12 Aligned_cols=31 Identities=13% Similarity=0.306 Sum_probs=25.6
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+| ++.-|.|++||..+
T Consensus 39 g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~ 70 (111)
T 2dlu_A 39 GVVVRTIVPGGLADRDGRLQTGDHILKIGGTN 70 (111)
T ss_dssp SBEEEEECTTSSHHHHTCCCSSCEEEEESSCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 36666656788999999 99999999999754
No 104
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=34.20 E-value=30 Score=21.64 Aligned_cols=30 Identities=13% Similarity=0.181 Sum_probs=25.7
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
-+||.-=..|++.+.+| ++.-|.|++||.-
T Consensus 35 ~~~V~~V~~~spA~~aG~L~~GD~Il~ing~ 65 (103)
T 1uep_A 35 PILIGAVIAMGSADRDGRLHPGDELVYVDGI 65 (103)
T ss_dssp CCBEEEECTTSTTGGGTCCCTTCEEEEETTE
T ss_pred CeEEEEeCCCChHHhCCCCCCCCEEEEECCE
Confidence 46777667899999999 9999999999964
No 105
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=34.15 E-value=49 Score=20.10 Aligned_cols=25 Identities=24% Similarity=0.307 Sum_probs=20.1
Q ss_pred ccchhhHhhhccCCCCeEEEecCCC
Q psy15576 57 GISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 57 GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
+-.+++-.-+|++.-|.|++||..+
T Consensus 26 ~~~~s~A~~aGl~~GD~I~~ing~~ 50 (87)
T 2i6v_A 26 GKDPVLFESIGLQDGDMAVALNGLD 50 (87)
T ss_dssp CSCHHHHHHTTCCTTCEEEEETTEE
T ss_pred CCCCCHHHHCCCCCCCEEEEECCEE
Confidence 3345577889999999999999753
No 106
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=34.12 E-value=47 Score=20.80 Aligned_cols=31 Identities=26% Similarity=0.453 Sum_probs=25.4
Q ss_pred ceEEeeccchhhHhhhcc-CCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGM-KDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm-~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+.+|+ +.-|.|++||..+
T Consensus 27 ~~~V~~v~~~spA~~aGll~~GD~I~~ing~~ 58 (112)
T 1qau_A 27 PVIISDLIRGGAAEQSGLIQAGDIILAVNDRP 58 (112)
T ss_dssp CEEEEEECTTSHHHHHTCCCTTCEEEEETTEE
T ss_pred CEEEEEeCCCChHHHcCCCCCCCEEEEECCEE
Confidence 456665567899999998 9999999999743
No 107
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=34.08 E-value=39 Score=22.14 Aligned_cols=32 Identities=16% Similarity=0.419 Sum_probs=26.6
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
+-++|.-=..|++.+.+| ++--|.|++||.-+
T Consensus 65 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~ 97 (128)
T 1nf3_C 65 PGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIE 97 (128)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEETTEE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEE
Confidence 457777667899999999 99999999999643
No 108
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=33.94 E-value=40 Score=21.12 Aligned_cols=31 Identities=13% Similarity=0.305 Sum_probs=26.3
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-+||.-=..|++.+.+| ++.-|.|++||..+
T Consensus 41 gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~ 72 (107)
T 1wf8_A 41 GIFVKTVTEGGAAQRDGRIQVNDQIVEVDGIS 72 (107)
T ss_dssp EEEEEEECTTCHHHHHCSSCTTCBEEEETTEE
T ss_pred CEEEEEeCCCCHHHHcCCCCCCCEEEEECCEE
Confidence 46777667899999999 99999999999643
No 109
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.88 E-value=32 Score=21.43 Aligned_cols=31 Identities=13% Similarity=0.277 Sum_probs=25.6
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-+||.-=..|++.+.+|++.-|.|++||..+
T Consensus 33 g~~V~~V~~~spA~~aGl~~GD~I~~vng~~ 63 (106)
T 2eei_A 33 GVYMTDITPQGVAMRAGVLADDHLIEVNGEN 63 (106)
T ss_dssp SCEECCCCTTSHHHHHTCCSSEEEEEETTEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 4566655678999999999999999999754
No 110
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=33.82 E-value=39 Score=21.10 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=26.1
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 42 g~~V~~V~~~spA~~aGL~~GD~I~~ing~~ 72 (104)
T 1wi2_A 42 GIFISKVIPDSDAHRAGLQEGDQVLAVNDVD 72 (104)
T ss_dssp CCEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred CEEEEEeCCCChHHHcCCCCCCEEEEECCEE
Confidence 4677766788999999999999999999643
No 111
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=33.66 E-value=12 Score=28.96 Aligned_cols=47 Identities=26% Similarity=0.316 Sum_probs=35.3
Q ss_pred CcceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 49 IPELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
+.+|.|++--||-..-+.-. +++ .+|+|-++++.|+-+.||+.+.-.
T Consensus 91 ~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga-~~iaIT~~~~S~La~~ad~~l~~~ 143 (344)
T 3fj1_A 91 DRALCLAVSQSGKSPDIVAMTRNAGRDGA-LCVALTNDAASPLAGVSAHTIDIH 143 (344)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHTTC-EEEEEESCTTSHHHHTSSEEEECC
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHCCC-cEEEEECCCCChHHHhcCEeeecC
Confidence 56899999999954332211 234 588999999999999999998754
No 112
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=33.66 E-value=45 Score=20.43 Aligned_cols=30 Identities=20% Similarity=0.225 Sum_probs=24.4
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++...+|++.-|.|++||..+
T Consensus 36 ~~V~~V~~~spA~~aGl~~GD~I~~ing~~ 65 (99)
T 3khf_A 36 HVVWSVEDGSPAQEAGLRAGDLITHINGES 65 (99)
T ss_dssp EEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred eEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 455555678999999999999999999643
No 113
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=33.52 E-value=39 Score=21.06 Aligned_cols=31 Identities=19% Similarity=0.425 Sum_probs=25.8
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+| ++.-|.|++||..+
T Consensus 45 gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~ 76 (108)
T 2jre_A 45 GIYVKSLIPGSAAALDGRIEPNDKILRVDDVN 76 (108)
T ss_dssp CCEEEEECTTSHHHHHSSCCSSEEEEEETTEE
T ss_pred CEEEEEeCCCCHHHHcCCCCCCCEEEEECCEE
Confidence 46666666789999999 99999999999653
No 114
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=33.41 E-value=49 Score=20.64 Aligned_cols=31 Identities=16% Similarity=0.342 Sum_probs=25.3
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-+||.-=..|++.+.+| ++.-|.|++||..+
T Consensus 43 gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~ 74 (108)
T 1q7x_A 43 GIYVKAVIPQGAAESDGRIHKGDRVLAVNGVS 74 (108)
T ss_dssp CCBEEEECTTSTHHHHTCCCSSCEEEEETTEE
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEE
Confidence 46666556788999999 99999999999643
No 115
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=33.29 E-value=24 Score=22.38 Aligned_cols=27 Identities=19% Similarity=0.229 Sum_probs=22.7
Q ss_pred EeeccchhhHhhhccCCCCeEEEecCC
Q psy15576 54 IAVGISGAIQHLAGMKDSKTIVAINKD 80 (108)
Q Consensus 54 ia~GISGA~QH~~Gm~~s~~IIAIN~D 80 (108)
|.-=+.|.+.+.+|++.-|.|+.||--
T Consensus 27 I~~v~~gspA~~aGl~~GD~Il~VNG~ 53 (82)
T 1r6j_A 27 ITSIVKDSSAARNGLLTEHNICEINGQ 53 (82)
T ss_dssp EEEECTTSHHHHHTCCSSEEEEEETTE
T ss_pred EEEecCCCHHHHcCCCCCCEEEEECCE
Confidence 333467999999999999999999964
No 116
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.27 E-value=40 Score=20.28 Aligned_cols=32 Identities=22% Similarity=0.462 Sum_probs=25.3
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
..++|.-=..|++.+.+| ++.-|.|++||..+
T Consensus 30 ~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~ 62 (93)
T 2dkr_A 30 SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVS 62 (93)
T ss_dssp CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 346666556788999996 99999999999753
No 117
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=33.27 E-value=42 Score=21.73 Aligned_cols=32 Identities=22% Similarity=0.363 Sum_probs=27.0
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
.-+||.-=..|++.+.+| ++.-|.|++||..+
T Consensus 46 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~ 78 (129)
T 2dmz_A 46 SGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVN 78 (129)
T ss_dssp CEEEEEEECTTSHHHHHTCCCSSCBEEEETTBC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEE
Confidence 347777767899999999 99999999999754
No 118
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=33.05 E-value=6.2 Score=27.65 Aligned_cols=11 Identities=18% Similarity=0.003 Sum_probs=6.8
Q ss_pred HHHHHHHHHhh
Q psy15576 97 LFKAVPELTEK 107 (108)
Q Consensus 97 ~~evlp~Li~~ 107 (108)
+.+++++|.+.
T Consensus 156 ~~~~l~~L~~~ 166 (170)
T 3cf4_G 156 KADHYAALDEL 166 (170)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 56666666653
No 119
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=32.98 E-value=48 Score=22.07 Aligned_cols=31 Identities=16% Similarity=0.294 Sum_probs=27.2
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-+||.-=..|++...+|++.-|.|++||..+
T Consensus 66 gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~ 96 (132)
T 3l4f_D 66 LQYLESVDEGGVAWRAGLRMGDFLIEVNGQN 96 (132)
T ss_dssp SEEEEEECTTSGGGGGTCCTTCEEEEESSSB
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 4788877889999999999999999999754
No 120
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=32.89 E-value=53 Score=20.98 Aligned_cols=32 Identities=34% Similarity=0.494 Sum_probs=27.9
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
|.+||.-=+.|.+.+.+| ++.-|.|++||..+
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~ 73 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKES 73 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEE
Confidence 458888778999999999 99999999999753
No 121
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=32.56 E-value=51 Score=20.75 Aligned_cols=32 Identities=13% Similarity=0.231 Sum_probs=26.8
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
+-+||.-=..|++.+.+| ++.-|.|++||-.+
T Consensus 44 ~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~ 76 (108)
T 2d92_A 44 SVIVIRSLVADGVAERSGGLLPGDRLVSVNEYC 76 (108)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEESSCB
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEE
Confidence 447777667899999999 99999999999654
No 122
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=32.39 E-value=49 Score=20.14 Aligned_cols=30 Identities=23% Similarity=0.431 Sum_probs=24.5
Q ss_pred eEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+| ++.-|.|++||.-+
T Consensus 39 ~~V~~V~~~spA~~aG~L~~GD~I~~ing~~ 69 (98)
T 1ihj_A 39 IFIKGIVPDSPAHLCGRLKVGDRILSLNGKD 69 (98)
T ss_dssp EEEEEECTTSHHHHHCSCCTTCEEEEETTEE
T ss_pred EEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 5555546789999999 99999999999654
No 123
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=32.02 E-value=48 Score=20.76 Aligned_cols=31 Identities=13% Similarity=0.200 Sum_probs=25.4
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 47 g~~V~~V~~~spA~~aGL~~GD~I~~ing~~ 77 (110)
T 1x5q_A 47 GIFISRVSEEGPAARAGVRVGDKLLEVNGVA 77 (110)
T ss_dssp SEEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 3566655678999999999999999999653
No 124
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=31.98 E-value=27 Score=27.36 Aligned_cols=49 Identities=16% Similarity=0.274 Sum_probs=36.8
Q ss_pred CcceEEeeccchhhHhhhcc----CCCC--eEEEecCCCCCCcccccCeeEeeeH
Q psy15576 49 IPELYIAVGISGAIQHLAGM----KDSK--TIVAINKDPEAPIFQVSDYGLVADL 97 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm----~~s~--~IIAIN~Dp~ApIf~~ADygiVgD~ 97 (108)
+.+|.|++--||-..-+.-. +... .+|+|-++++.|+-+.||+.+.-..
T Consensus 101 ~~dlvI~iS~SG~T~e~l~al~~ak~~G~a~~iaIT~~~~S~La~~aD~~l~~~~ 155 (372)
T 3tbf_A 101 DGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKA 155 (372)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHTTTTEEEEEEEESSSSSHHHHHSSEEEECCC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHcCCceEEEEcCCCCChHHHhCCEeeeecC
Confidence 45899999999965444322 2222 6889999999999999999987543
No 125
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=31.96 E-value=63 Score=19.67 Aligned_cols=29 Identities=21% Similarity=0.188 Sum_probs=23.3
Q ss_pred eEEeeccchhhHhh-hccCCCCeEEEecCC
Q psy15576 52 LYIAVGISGAIQHL-AGMKDSKTIVAINKD 80 (108)
Q Consensus 52 lYia~GISGA~QH~-~Gm~~s~~IIAIN~D 80 (108)
++|.-=..|++.+. +|++.-|.|++||.-
T Consensus 27 ~~I~~V~~gspA~~~agL~~GD~I~~Ing~ 56 (88)
T 1kwa_A 27 CIVARIMHGGMIHRQGTLHVGDEIREINGI 56 (88)
T ss_dssp EEEEEECTTSHHHHHTCCCTTCEEEEETTE
T ss_pred EEEEEECCCCHHHHcCCCCCCCEEEEECCE
Confidence 55555566888888 899999999999964
No 126
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=31.88 E-value=50 Score=20.29 Aligned_cols=30 Identities=17% Similarity=0.408 Sum_probs=23.9
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
-++|.-=..|++.+.+| ++.-|.|++||.-
T Consensus 38 gv~V~~V~~~spA~~aG~L~~GD~I~~vng~ 68 (101)
T 2jik_A 38 GIYVSRIKENGAAALDGRLQEGDKILSVNGQ 68 (101)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCE
Confidence 35555445688999999 9999999999964
No 127
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=31.85 E-value=61 Score=20.75 Aligned_cols=31 Identities=23% Similarity=0.356 Sum_probs=26.3
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-+||.-=..|++.+.+| ++.-|.|++||-.+
T Consensus 50 g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~ 81 (117)
T 1ujd_A 50 GAYIAKILPGGSAEQTGKLMEGMQVLEWNGIP 81 (117)
T ss_dssp EEEEEEECTTCHHHHHSSCCTTCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 47777667899999999 99999999999644
No 128
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=31.66 E-value=54 Score=20.90 Aligned_cols=33 Identities=15% Similarity=0.317 Sum_probs=27.5
Q ss_pred CcceEEeeccchhhHhhhcc-CCCCeEEEecCCC
Q psy15576 49 IPELYIAVGISGAIQHLAGM-KDSKTIVAINKDP 81 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm-~~s~~IIAIN~Dp 81 (108)
...++|.-=..|.+.+.+|+ +.-|.|++||.-+
T Consensus 47 ~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~ 80 (113)
T 1va8_A 47 MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIE 80 (113)
T ss_dssp SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEE
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEE
Confidence 34577777778999999999 9999999999643
No 129
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=31.49 E-value=47 Score=21.57 Aligned_cols=31 Identities=13% Similarity=0.268 Sum_probs=26.3
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++...+| ++.-|.|++||.-+
T Consensus 59 gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~ 90 (121)
T 2kom_A 59 PIYVKNILPRGAAIQDGRLKAGDRLIEVNGVD 90 (121)
T ss_dssp CEEEEEECTTSHHHHHTCCCSSSEEEEETTEE
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEE
Confidence 46777767899999999 99999999999643
No 130
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=31.47 E-value=31 Score=21.54 Aligned_cols=31 Identities=19% Similarity=0.133 Sum_probs=26.5
Q ss_pred cceEEeeccchhhHhhhccCCCCeEEEecCC
Q psy15576 50 PELYIAVGISGAIQHLAGMKDSKTIVAINKD 80 (108)
Q Consensus 50 P~lYia~GISGA~QH~~Gm~~s~~IIAIN~D 80 (108)
+-++|.-=..|++.+.+|++.-|.|++||.-
T Consensus 48 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~ 78 (104)
T 2z17_A 48 MFTLICKIQEDSPAHCAGLQAGDVLANINGV 78 (104)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCBCCEETTE
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCE
Confidence 4567776678999999999999999999964
No 131
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=31.24 E-value=26 Score=21.47 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=23.3
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 32 ~~V~~V~~~spA~~aGL~~GD~I~~ing~~ 61 (94)
T 1vb7_A 32 IIVTKVTERGKAEAADLRPGDIIVAINGQS 61 (94)
T ss_dssp EECCCBCTTSSHHHHTCCTTCEEEEETTEE
T ss_pred eEEEEECCCCHHHHCCCCCCCEEEEECCEE
Confidence 444444567888899999999999999754
No 132
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=31.24 E-value=50 Score=21.87 Aligned_cols=33 Identities=12% Similarity=0.191 Sum_probs=28.2
Q ss_pred CcceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 49 IPELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
.+-+||.-=..|.+.+.+| ++.-|.|++||.-+
T Consensus 64 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~ 97 (131)
T 1wfg_A 64 RLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRL 97 (131)
T ss_dssp CEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEE
Confidence 3467888778899999999 99999999999653
No 133
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=31.21 E-value=12 Score=29.17 Aligned_cols=45 Identities=13% Similarity=0.156 Sum_probs=34.7
Q ss_pred ceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 51 ELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
+|.|++--||-...+... +++ .+|+|-++++.|+-+.||+.+.-.
T Consensus 99 dlvI~iS~SG~T~e~l~a~~~Ak~~Ga-~~iaIT~~~~S~La~~ad~~l~~~ 149 (367)
T 2poc_A 99 DTCVFVSQSGETADSILALQYCLERGA-LTVGIVNSVGSSMSRQTHCGVHIN 149 (367)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTC-EEEEEESSTTSHHHHHSSEEEECC
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCC-CEEEEECCCCChHHHhCCEEEEcC
Confidence 589999999965544331 233 588898899999999999988654
No 134
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=31.11 E-value=52 Score=20.45 Aligned_cols=31 Identities=10% Similarity=0.421 Sum_probs=26.0
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-+||.-=..|++.+.+| ++.-|.|++||..+
T Consensus 39 gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~ 70 (106)
T 3axa_A 39 GIYVKSVVKGGAADVDGRLAAGDQLLSVDGRS 70 (106)
T ss_dssp EEEEEEEBTTSHHHHHCCCCTTCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 46676667899999999 99999999999653
No 135
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=31.04 E-value=29 Score=26.56 Aligned_cols=26 Identities=27% Similarity=0.382 Sum_probs=23.0
Q ss_pred EEEecCCCCCCcccccCeeEeeeHHH
Q psy15576 74 IVAINKDPEAPIFQVSDYGLVADLFK 99 (108)
Q Consensus 74 IIAIN~Dp~ApIf~~ADygiVgD~~e 99 (108)
+++++.++++|-.+.||..++.|+.+
T Consensus 40 vi~~d~~~~~~~~~~ad~~~~~~~~d 65 (389)
T 3q2o_A 40 IAVLDPTKNSPCAQVADIEIVASYDD 65 (389)
T ss_dssp EEEEESSTTCTTTTTCSEEEECCTTC
T ss_pred EEEEeCCCCCchHHhCCceEecCcCC
Confidence 77889999999999999999987654
No 136
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=30.92 E-value=22 Score=24.02 Aligned_cols=30 Identities=23% Similarity=0.429 Sum_probs=24.7
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
..|.-=..|++...+|++.-|.|++||..+
T Consensus 41 ~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~ 70 (101)
T 3qik_A 41 VVVKSVQRGSLAEVAGLQVGRKIYSINEDL 70 (101)
T ss_dssp EEEEEECTTSHHHHHTCCTTCBEEEETTEE
T ss_pred eEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 345544689999999999999999999765
No 137
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=30.77 E-value=52 Score=20.50 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=26.0
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
+-+||.-=..|++.+.+| ++.-|.|++||.-+
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~ 70 (105)
T 1wha_A 38 AGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVD 70 (105)
T ss_dssp CSCEEEECCTTSSHHHHSSCCTTCEEEEESSCB
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEE
Confidence 346666666789999999 99999999999643
No 138
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=30.76 E-value=37 Score=26.65 Aligned_cols=47 Identities=15% Similarity=0.119 Sum_probs=35.2
Q ss_pred CcceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 49 IPELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
+.+|.|++--||-..-+.-. +++ .+|+|-++++.|+-+.||+.+.-.
T Consensus 97 ~~dlvI~iS~SGeT~e~l~a~~~ak~~Ga-~~IaIT~~~~S~La~~aD~~l~~~ 149 (366)
T 3knz_A 97 GKALVVGISQGGGSLSTLAAMERARNVGH-ITASMAGVAPATIDRAADYILTVP 149 (366)
T ss_dssp CSEEEEEEESSSCCHHHHHHHHHHHHTTC-EEEEEESSSSCGGGGGCSEECCCC
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHcCC-CEEEEECCCCChhhhhcCEEEecC
Confidence 45789999999965443221 244 588899999999999999998643
No 139
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=30.63 E-value=35 Score=21.35 Aligned_cols=32 Identities=16% Similarity=0.433 Sum_probs=25.2
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
+-++|.-=..|++.+.+| ++.-|.|++||.-+
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~ 71 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVN 71 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCB
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 345555445788999999 99999999999754
No 140
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=30.44 E-value=51 Score=21.61 Aligned_cols=30 Identities=13% Similarity=0.330 Sum_probs=26.2
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
-+||.-=..|++.+.+| ++.-|.|++||.-
T Consensus 54 gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~ 84 (118)
T 3b76_A 54 PIYVISVEPGGVISRDGRIKTGDILLNVDGV 84 (118)
T ss_dssp CEEEEEECTTSHHHHHCSSCTTCEEEEETTE
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCE
Confidence 36777777899999999 9999999999964
No 141
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=30.37 E-value=60 Score=20.94 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=27.6
Q ss_pred cceEEeeccchhhHhhh-ccCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLA-GMKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~-Gm~~s~~IIAIN~Dp 81 (108)
+.++|.-=+.|++.+.+ |++.-|.|++||..+
T Consensus 43 ~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~ 75 (118)
T 1v6b_A 43 GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKI 75 (118)
T ss_dssp CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCB
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 34888877889999999 999999999999764
No 142
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=30.31 E-value=27 Score=26.74 Aligned_cols=47 Identities=26% Similarity=0.297 Sum_probs=35.2
Q ss_pred CcceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 49 IPELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
+.+|.|++--||-..-+.-. +++ .+|+|-++++.|+-+.||+.+.-.
T Consensus 74 ~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga-~~iaIT~~~~S~La~~ad~~l~~~ 126 (329)
T 3eua_A 74 EKSLVILCSHSGNTPETVKAAAFARGKGA-LTIAMTFKPESPLAQEAQYVAQYD 126 (329)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHTTC-EEEEEESCTTSHHHHHSSEEEECC
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHCCC-CEEEEECCCCChHHHhCCEEEEeC
Confidence 45799999999965443222 244 578888899999999999998643
No 143
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=29.93 E-value=32 Score=22.40 Aligned_cols=30 Identities=23% Similarity=0.194 Sum_probs=24.1
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+|++.-|.|++||..+
T Consensus 38 v~V~~V~~~spA~~aGL~~GD~Il~InG~~ 67 (111)
T 1vae_A 38 VQVHFLDPHCSASLAGAKEGDYIVSIQGVD 67 (111)
T ss_dssp CEECCCCTTSSHHHHHCCTTCEEEEETTEE
T ss_pred EEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 455555678888999999999999999643
No 144
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=29.76 E-value=42 Score=21.38 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=25.9
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 43 gv~V~~V~~~spA~~aGL~~GD~Il~vng~~ 73 (117)
T 1uit_A 43 GIYVSKVTVGSIAHQAGLEYGDQLLEFNGIN 73 (117)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEECEETTEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 4666666678999999999999999999653
No 145
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=29.51 E-value=17 Score=28.08 Aligned_cols=47 Identities=19% Similarity=0.362 Sum_probs=35.1
Q ss_pred CcceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 49 IPELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
..+|.|++--||-...+.-. +++ .+|+|-++++.|+-+.||+.+.-.
T Consensus 102 ~~dlvI~iS~SG~t~e~~~a~~~ak~~Ga-~vi~IT~~~~S~La~~ad~~l~~~ 154 (355)
T 2a3n_A 102 KDSVVITLSKSGDTKESVAIAEWCKAQGI-RVVAITKNADSPLAQAATWHIPMR 154 (355)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTC-EEEEEESCTTSHHHHTCSEEEECC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCC-eEEEEECCCCChhhHhCCEEEEeC
Confidence 45899999999965443221 233 578888889999999999988654
No 146
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=29.34 E-value=33 Score=26.37 Aligned_cols=27 Identities=15% Similarity=0.164 Sum_probs=23.4
Q ss_pred eEEEecCCCCCCcccccCeeEeeeHHH
Q psy15576 73 TIVAINKDPEAPIFQVSDYGLVADLFK 99 (108)
Q Consensus 73 ~IIAIN~Dp~ApIf~~ADygiVgD~~e 99 (108)
.+++++.++++|-.++||..++.|+.+
T Consensus 37 ~viv~d~~~~~p~~~~ad~~~~~~~~d 63 (377)
T 3orq_A 37 KVVVLDPSEDCPCRYVAHEFIQAKYDD 63 (377)
T ss_dssp EEEEEESCTTCTTGGGSSEEEECCTTC
T ss_pred EEEEEECCCCChhhhhCCEEEECCCCC
Confidence 477889999999999999999988654
No 147
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=29.19 E-value=48 Score=21.04 Aligned_cols=31 Identities=26% Similarity=0.233 Sum_probs=24.8
Q ss_pred ceEEeeccchhhHhh-hccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHL-AGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~-~Gm~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+. +|++.-|.|++||.-+
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~ 75 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQS 75 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBC
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEE
Confidence 446665567888888 9999999999999754
No 148
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=29.02 E-value=57 Score=20.95 Aligned_cols=30 Identities=13% Similarity=0.237 Sum_probs=26.6
Q ss_pred eEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
+||.-=..|.+.+.+| ++--|.|++||..+
T Consensus 44 ~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~ 74 (117)
T 1v62_A 44 ITIDRIKPASVVDRSGALHPGDHILSIDGTS 74 (117)
T ss_dssp EEEEECCTTSHHHHHTCCCTTCBEEEETTEE
T ss_pred EEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 7888777899999999 99999999999654
No 149
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=28.89 E-value=53 Score=19.53 Aligned_cols=31 Identities=19% Similarity=0.220 Sum_probs=25.5
Q ss_pred ceEEeeccchhhHhh-hccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHL-AGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~-~Gm~~s~~IIAIN~Dp 81 (108)
.+||.-=..|++.+. +|++.-|.|++||..+
T Consensus 29 ~~~V~~V~~gspA~~~agl~~GD~I~~vng~~ 60 (87)
T 4e34_A 29 PILISEIHPGQPADRCGGLHVGDAILAVNGVN 60 (87)
T ss_dssp EEEEEEECTTSHHHHHSCCCTTEEEEEETTEE
T ss_pred CEEEEEECCCCHHHhcCCCCCCCEEEEECCEE
Confidence 367776677888888 6999999999999754
No 150
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=28.68 E-value=52 Score=21.24 Aligned_cols=31 Identities=13% Similarity=0.193 Sum_probs=26.5
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+| ++.-|.|++||..+
T Consensus 52 gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~ 83 (124)
T 2daz_A 52 SIFVVGINPEGPAAADGRMRIGDELLEINNQI 83 (124)
T ss_dssp CEEEEEECTTSHHHHHTCCCTTCEECEESSCB
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 56777667899999999 99999999999754
No 151
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=28.53 E-value=76 Score=19.98 Aligned_cols=31 Identities=23% Similarity=0.457 Sum_probs=26.3
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-+||.-=..|++.+.+| ++.-|.|++||..+
T Consensus 33 gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~ 64 (106)
T 4amh_A 33 SIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVA 64 (106)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEE
Confidence 57777777888999999 99999999999753
No 152
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=28.23 E-value=48 Score=20.60 Aligned_cols=30 Identities=17% Similarity=0.150 Sum_probs=25.0
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+|++.-|.|++||..+
T Consensus 31 v~V~~V~~~spA~~aGL~~GD~I~~ing~~ 60 (103)
T 1wf7_A 31 LTISSLKDGGKASQAHVRIGDVVLSIDGIS 60 (103)
T ss_dssp EEECCCCTTCHHHHTTCCTTCBEEEETTEE
T ss_pred EEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 566555678899999999999999999754
No 153
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=28.22 E-value=50 Score=20.53 Aligned_cols=30 Identities=10% Similarity=0.245 Sum_probs=22.8
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.. +|++.-|.|++||.-+
T Consensus 40 gv~V~~V~~~spA~-agl~~GD~I~~vng~~ 69 (107)
T 2h2b_A 40 SIVISDVLKGGPAE-GQLQENDRVAMVNGVS 69 (107)
T ss_dssp CEEEEEECTTSTTB-TTBCTTCEEEEETTEE
T ss_pred CEEEEEECCCCchh-hCCCCCCEEEEECCEE
Confidence 35555445677777 9999999999999643
No 154
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=28.17 E-value=57 Score=20.85 Aligned_cols=30 Identities=23% Similarity=0.283 Sum_probs=25.4
Q ss_pred eEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
++|.-=+.|++.+.+| ++.-|.|++||..+
T Consensus 27 v~V~~V~~gspA~~aG~L~~GD~Il~Ing~~ 57 (106)
T 2la8_A 27 CTIADLIQGQYPEIDSKLQRGDIITKFNGDA 57 (106)
T ss_dssp EEEEECCTTSCHHHHTTCCTTCEEEEESSCB
T ss_pred EEEEEECCCCHHHHCCCCCCCCEEEEECCEE
Confidence 5666666788999999 99999999999764
No 155
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=28.15 E-value=64 Score=20.86 Aligned_cols=31 Identities=23% Similarity=0.309 Sum_probs=25.6
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+|++.-|.|++||..+
T Consensus 47 gv~V~~V~~~spA~~aGL~~GD~I~~vng~~ 77 (128)
T 1uf1_A 47 GIYITGVDPGSEAEGSGLKVGDQILEVNGRS 77 (128)
T ss_dssp CCEEEEECTTCHHHHHTCCTTCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHCCCCCCCEEEEECCEE
Confidence 4666655678999999999999999999643
No 156
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=28.11 E-value=54 Score=27.90 Aligned_cols=35 Identities=11% Similarity=0.206 Sum_probs=25.8
Q ss_pred EEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhhC
Q psy15576 74 IVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEKL 108 (108)
Q Consensus 74 IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~l 108 (108)
||-|+.||+-. -+..+|+.+++|+.+++.+|++++
T Consensus 393 iI~idid~~~~~~~~~~~~~i~gD~~~~l~~L~~~l 428 (677)
T 1t9b_A 393 IIHFEVSPKNINKVVQTQIAVEGDATTNLGKMMSKI 428 (677)
T ss_dssp EEEEESCGGGSSSSSCCSEEEESCHHHHHHHHHTTS
T ss_pred EEEEECCHHHhCCcccCCEEEeCCHHHHHHHHHHHh
Confidence 66777776531 123479999999999999998753
No 157
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=28.10 E-value=27 Score=27.13 Aligned_cols=48 Identities=17% Similarity=0.290 Sum_probs=35.3
Q ss_pred CcceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeeeH
Q psy15576 49 IPELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVADL 97 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD~ 97 (108)
+.+|.|++--||-..-+.-. +++ .+|+|-++++.|+-+.||+.+.-..
T Consensus 89 ~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga-~~iaIT~~~~S~La~~ad~~l~~~~ 142 (347)
T 3fkj_A 89 KNSVVILASQQGNTAETVAAARVAREKGA-ATIGLVYQPDTPLCEYSDYIIEYQW 142 (347)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHHTC-EEEEEESSTTCHHHHTCSEEEECBC
T ss_pred CCCEEEEEeCCCCcHHHHHHHHHHHHCCC-cEEEEeCCCCChHHhhcCeEEEecc
Confidence 35799999999954433222 234 4788888999999999999986443
No 158
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=28.00 E-value=15 Score=28.72 Aligned_cols=45 Identities=16% Similarity=0.197 Sum_probs=33.8
Q ss_pred ceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 51 ELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
+|.|++--||-...+... +++ .+|+|-++++.|+-+.||+.+.-.
T Consensus 109 dlvI~iS~SG~T~e~l~a~~~Ak~~Ga-~~iaIT~~~~S~La~~ad~~l~~~ 159 (375)
T 2zj3_A 109 DVCFFLSQSGETADTLMGLRYCKERGA-LTVGITNTVGSSISRETDCGVHIN 159 (375)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTC-EEEEEESCTTCHHHHHSSEEEECC
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCC-cEEEEECCCCChHHHhCCEeeeec
Confidence 689999999954443221 133 588898899999999999988654
No 159
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=27.94 E-value=40 Score=20.63 Aligned_cols=30 Identities=20% Similarity=0.317 Sum_probs=24.4
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 31 ~~V~~V~~~spA~~aGL~~GD~I~~ing~~ 60 (93)
T 2dls_A 31 VLVQSVRPGGAAMKAGVKEGDRIIKVNGTM 60 (93)
T ss_dssp CEEEEECSSSTTTTTTCCSSCEEEEETTEE
T ss_pred EEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 555544578899999999999999999754
No 160
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=27.76 E-value=70 Score=20.23 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=26.8
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
+-+||.-=..|++.+.+| ++.-|.|++||..+
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~ 65 (108)
T 3cbz_A 33 GGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMN 65 (108)
T ss_dssp CEEEEEEECTTSHHHHHCCCCTTCEEEEETTEE
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEE
Confidence 456777667899999999 99999999999754
No 161
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=27.52 E-value=79 Score=19.72 Aligned_cols=31 Identities=23% Similarity=0.377 Sum_probs=25.4
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-+||.-=..|++.+.+| ++.-|.|++||.-+
T Consensus 37 gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~ 68 (110)
T 1um1_A 37 GLYIQTLLPGSPAAADGRLSLGDRILEVNGSS 68 (110)
T ss_dssp SEEEEEECTTSHHHHHSCCCTTCEEEEESSCB
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCEE
Confidence 46665556789999999 99999999999754
No 162
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=27.45 E-value=65 Score=20.01 Aligned_cols=31 Identities=23% Similarity=0.451 Sum_probs=24.8
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+| ++.-|.|++||..+
T Consensus 34 gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~ 65 (105)
T 2awx_A 34 SIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVS 65 (105)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEE
Confidence 35555556788999999 99999999999643
No 163
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=27.42 E-value=61 Score=20.22 Aligned_cols=24 Identities=13% Similarity=0.122 Sum_probs=20.6
Q ss_pred cchhhHhhhccCCCCeEEEecCCC
Q psy15576 58 ISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 58 ISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
..|++..-+|++.-|.|++||.-+
T Consensus 10 ~~~spA~~aGl~~GD~I~~ing~~ 33 (95)
T 3id1_A 10 AANSIAAEAQIAPGTELKAVDGIE 33 (95)
T ss_dssp CTTSHHHHTTCCTTCEEEEETTEE
T ss_pred CCCCHHHHcCCCCCCEEEEECCEE
Confidence 457888999999999999999654
No 164
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=27.15 E-value=72 Score=20.04 Aligned_cols=28 Identities=21% Similarity=0.303 Sum_probs=21.1
Q ss_pred EeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 54 IAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 54 ia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
+.-+-.+++-..+|++.-|.|++||..+
T Consensus 41 V~~~~pas~A~~aGl~~GDvI~~ing~~ 68 (105)
T 2i4s_A 41 VSPGKDPVLFESIGLQDGDMAVALNGLD 68 (105)
T ss_dssp EEECSCTHHHHHHTCCTTCEEEEETTEE
T ss_pred EecCCCCCHHHHcCCCCCCEEEEECCEE
Confidence 3334445567889999999999999754
No 165
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=27.00 E-value=51 Score=20.93 Aligned_cols=31 Identities=26% Similarity=0.214 Sum_probs=26.0
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 39 g~~V~~V~~~spA~~aGL~~GD~I~~ing~~ 69 (114)
T 2edz_A 39 GHLIRVIEEGSPAEKAGLLDGDRVLRINGVF 69 (114)
T ss_dssp SCEEECCCTTCTTGGGTCCTTCEEEEESSSB
T ss_pred CeEEEEeCCCChHHHcCCCCCCEEEEECCEE
Confidence 4566666779999999999999999999754
No 166
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.84 E-value=61 Score=20.72 Aligned_cols=30 Identities=17% Similarity=0.408 Sum_probs=25.4
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
-+||.-=..|++.+.+| ++.-|.|++||.-
T Consensus 48 gv~V~~V~~~spA~~aG~L~~GD~Il~vng~ 78 (120)
T 2eno_A 48 GIYVSRIKENGAAALDGRLQEGDKILSVNGQ 78 (120)
T ss_dssp SEEEEEECSSSHHHHSCCSCTTCEEEEETTE
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCE
Confidence 46666666789999999 9999999999974
No 167
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=26.42 E-value=55 Score=20.16 Aligned_cols=30 Identities=23% Similarity=0.283 Sum_probs=25.1
Q ss_pred eEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
++|.-=+.|++.+.+| ++.-|.|++||..+
T Consensus 33 v~V~~V~~~spA~~aG~L~~GD~I~~Ing~~ 63 (96)
T 2qkv_A 33 CTIADLIQGQYPEIDSKLQRGDIITKFNGDA 63 (96)
T ss_dssp EEEEEECTTSCHHHHHHCCTTCEEEEETTEE
T ss_pred EEEEEeCCCChHHhcCCCCCCCEEEEECCEE
Confidence 5666556788999999 99999999999754
No 168
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=26.33 E-value=69 Score=20.70 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=25.6
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+.+| ++.-|.|++||.-+
T Consensus 49 gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~ 80 (124)
T 1wh1_A 49 GIYISEIDPNSIAAKDGRIREGDRIIQINGIE 80 (124)
T ss_dssp CEEEEEECSSSHHHHTCCCCTTCEEEEESSCB
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 46666556789999999 99999999999754
No 169
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=26.32 E-value=42 Score=25.90 Aligned_cols=48 Identities=23% Similarity=0.288 Sum_probs=36.0
Q ss_pred CcceEEeeccchhhHhhhc----cCCCC--eEEEecCCCCCCcccccCeeEeee
Q psy15576 49 IPELYIAVGISGAIQHLAG----MKDSK--TIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~G----m~~s~--~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
..+|.|++--||-..-+.- .+... .+|+|-++++.|+-+.||+.+.-.
T Consensus 99 ~~dlvI~iS~SG~T~e~l~a~~~ak~~G~a~viaIT~~~~S~La~~ad~~l~~~ 152 (368)
T 1moq_A 99 RNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTN 152 (368)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEEECC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHcCCCeEEEEECCCCChHHHhCCEEEEcC
Confidence 3479999999996544332 23333 689999999999999999988654
No 170
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=26.24 E-value=69 Score=20.93 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=25.5
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
-++|.-=..|++.+.+| ++.-|.|++||.-
T Consensus 44 ~v~V~~V~~~spA~~aG~L~~GD~Il~vng~ 74 (129)
T 2kpk_A 44 FLQIKSLVLDGPAALDGKMETGDVIVSVNDT 74 (129)
T ss_dssp EEEEEEECTTSHHHHHSSCCTTCEEEEETTE
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCE
Confidence 36776667889999999 9999999999964
No 171
>3p0f_A Uridine phosphorylase 2; transferase; HET: BAU; 1.54A {Homo sapiens} PDB: 3p0e_A* 2xrf_A
Probab=26.16 E-value=28 Score=26.97 Aligned_cols=25 Identities=20% Similarity=0.352 Sum_probs=21.4
Q ss_pred eCcceEEeeccchhhHhhhccCCCCeEEE
Q psy15576 48 LIPELYIAVGISGAIQHLAGMKDSKTIVA 76 (108)
Q Consensus 48 V~P~lYia~GISGA~QH~~Gm~~s~~IIA 76 (108)
++|+..|-+|.+|++| ++--|+||+
T Consensus 120 ~~~~~iIriGtaGgl~----l~vGDvVIa 144 (297)
T 3p0f_A 120 CCDVTIIRIGTSGGIG----IAPGTVVIT 144 (297)
T ss_dssp CBSCEEEEEEEEEESS----SCTTCEEEE
T ss_pred cCcceEEEEEeecccc----ccCCcEEee
Confidence 5588999999999999 777788885
No 172
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=26.13 E-value=83 Score=20.57 Aligned_cols=30 Identities=17% Similarity=0.271 Sum_probs=26.7
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
-++|.-=..|++...+| ++.-|.|++||.-
T Consensus 60 gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~ 90 (123)
T 2iwq_A 60 GIFIKHVLEDSPAGKNGTLKPGDRIVEVDGM 90 (123)
T ss_dssp SEEEEEECSSSHHHHHCCCCTTCEEEEETTE
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCE
Confidence 47887778899999999 9999999999964
No 173
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=26.06 E-value=62 Score=21.11 Aligned_cols=30 Identities=17% Similarity=0.124 Sum_probs=25.0
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++...+|++.-|.|++||..+
T Consensus 46 v~V~~V~~gspA~~AGL~~GD~Il~VnG~~ 75 (109)
T 2vsv_A 46 VQVHFLDPYCSASVAGAREGDYIVSIQLVD 75 (109)
T ss_dssp CEEEEECTTSHHHHTTCCTTCEEEEETTEE
T ss_pred eEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 456555678899999999999999999765
No 174
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=25.98 E-value=68 Score=19.99 Aligned_cols=31 Identities=10% Similarity=0.249 Sum_probs=25.1
Q ss_pred ceEEeeccchhhHhhh-ccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLA-GMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~-Gm~~s~~IIAIN~Dp 81 (108)
-+||.-=..|++.+.+ |++.-|.|++||.-+
T Consensus 42 gv~V~~V~~~spA~~aggL~~GD~Il~vng~~ 73 (107)
T 1uhp_A 42 GIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRD 73 (107)
T ss_dssp CCEEEEECSSSHHHHTTCCCSSCEEEEETTEE
T ss_pred CEEEEEeCCCChHHHcCCCCCCCEEEEECCEE
Confidence 4666655678888888 999999999999643
No 175
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=25.89 E-value=69 Score=20.67 Aligned_cols=30 Identities=17% Similarity=0.392 Sum_probs=25.7
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
-++|.-=..|++.+.+| ++.-|.|++||.-
T Consensus 55 gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~ 85 (117)
T 2byg_A 55 SIYVTKIIDGGAAQKDGRLQVGDRLLMVNNY 85 (117)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCE
Confidence 36777667899999999 9999999999963
No 176
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=25.60 E-value=43 Score=22.50 Aligned_cols=45 Identities=20% Similarity=0.402 Sum_probs=34.7
Q ss_pred ceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 51 ELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
++.|++--||-...+.-. +++ .+|+|-.+++.|+-+.||+.+.-.
T Consensus 98 d~vI~iS~sG~t~~~~~~~~~ak~~g~-~vi~IT~~~~s~la~~ad~~l~~~ 148 (183)
T 2xhz_A 98 DVVIAISNSGESSEITALIPVLKRLHV-PLICITGRPESSMARAADVHLCVK 148 (183)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHTTTC-CEEEEESCTTSHHHHHSSEEEECC
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCC-CEEEEECCCCChhHHhCCEEEEeC
Confidence 799999999976554321 234 478898889999999999988654
No 177
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=25.50 E-value=68 Score=21.54 Aligned_cols=31 Identities=19% Similarity=0.323 Sum_probs=25.9
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+-+|++.-|.|++||.-+
T Consensus 65 gv~V~~V~~~spA~~aGL~~GD~I~~vng~~ 95 (139)
T 2vz5_A 65 GIYVTRVSEGGPAEIAGLQIGDKIMQVNGWD 95 (139)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHCCCCCCCEEEEECCEE
Confidence 4666666789999999999999999999743
No 178
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=25.41 E-value=48 Score=20.92 Aligned_cols=31 Identities=13% Similarity=0.100 Sum_probs=24.9
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+.+| ++.-|.|++||.-+
T Consensus 44 gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~ 75 (116)
T 2dm8_A 44 AIVIHEVYEEGAAARDGRLWAGDQILEVNGVD 75 (116)
T ss_dssp SEECCCCCSSSHHHHHTCCCTTCEEEEETTEE
T ss_pred CEEEEEECCCChHHhCCCCCCCCEEEEECCEE
Confidence 45665556788999999 99999999999643
No 179
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.11 E-value=61 Score=21.26 Aligned_cols=31 Identities=23% Similarity=0.384 Sum_probs=26.1
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
.++|.-=.-|++.+.+|++.-|.|++||.-+
T Consensus 45 gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~ 75 (114)
T 2d8i_A 45 RLYVNSVKETGLASKKGLKAGDEILEINNRA 75 (114)
T ss_dssp EEEEEECCTTSSHHHHTCCTTCCEEEESSCB
T ss_pred CEEEEEeCCCCHHHHcCCCCCCEEEEECCEE
Confidence 3666666678999999999999999999765
No 180
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=25.04 E-value=56 Score=20.58 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=25.0
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 42 gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~ 72 (114)
T 1x5n_A 42 GIFISHVKPGSLSAEVGLEIGDQIVEVNGVD 72 (114)
T ss_dssp SEEEEEECTTSTTTTTTCCTTCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 4666655678888999999999999999653
No 181
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=24.89 E-value=60 Score=20.60 Aligned_cols=32 Identities=9% Similarity=0.172 Sum_probs=26.7
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
+-+||.-=..|++.+.+| ++.-|.|++||.-+
T Consensus 50 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~ 82 (117)
T 2ehr_A 50 KGIFIKQVLEDSPAGKTNALKTGDKILEVSGVD 82 (117)
T ss_dssp CSEEEEEECSSSTTTSSCSCCTTCEEEEESSCB
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEE
Confidence 357777667889999999 99999999999743
No 182
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=24.87 E-value=43 Score=21.28 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=26.4
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
|-.+|.-=..|.+.+.+| ++.-|.|++||-.+
T Consensus 32 ~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~ 64 (103)
T 1ufx_A 32 PLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLT 64 (103)
T ss_dssp SSCEEEEECTTSHHHHHCSSCTTCBCCEETTEE
T ss_pred CcEEEEEeCCCChHHHCCCCCCCCEEEEECCEE
Confidence 445676666899999999 99999999999643
No 183
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=24.67 E-value=49 Score=21.74 Aligned_cols=30 Identities=20% Similarity=0.444 Sum_probs=26.4
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
-+||.-=+.|.+.+.+| ++--|.|++||..
T Consensus 56 gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~ 86 (127)
T 1wg6_A 56 GIFIKSIIHGGAAFKDGRLRMNDQLIAVNGE 86 (127)
T ss_dssp EEEEEECCSSSSTHHHHTSCSCCBEEEETTE
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCE
Confidence 47787778899999999 9999999999963
No 184
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=24.59 E-value=80 Score=20.14 Aligned_cols=31 Identities=23% Similarity=0.315 Sum_probs=25.8
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
.++|+-=+.|++...+| ++.-|.|++||.-+
T Consensus 37 gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~ 68 (97)
T 2ejy_A 37 SCTVARILHGGMIHRQGSLHVGDEILEINGTN 68 (97)
T ss_dssp CEEEEEECSSSHHHHHTCCCTTCEEEEETTBC
T ss_pred CEEEEEeCCCCHHHHcCCCCCCCEEEEECCEE
Confidence 36666557799999999 99999999999754
No 185
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=24.58 E-value=78 Score=19.88 Aligned_cols=24 Identities=25% Similarity=0.472 Sum_probs=20.7
Q ss_pred cchhhHhhhccCCCCeEEEecCCC
Q psy15576 58 ISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 58 ISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
..|++.+.+|++.-|.|++||..+
T Consensus 43 ~~~spA~~aGl~~GD~I~~ing~~ 66 (112)
T 2p3w_A 43 APNSPSQRGGIQDGDIIVKVNGRP 66 (112)
T ss_dssp CTTSHHHHHTCCTTCEEEEETTEE
T ss_pred CCCChHHHCCCCCCCEEEEECCEE
Confidence 457888999999999999999743
No 186
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=24.47 E-value=88 Score=19.58 Aligned_cols=24 Identities=33% Similarity=0.523 Sum_probs=20.7
Q ss_pred cchhhHhhhccCCCCeEEEecCCC
Q psy15576 58 ISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 58 ISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
..|++.+-+|++.-|.|++||.-+
T Consensus 43 ~~~spA~~aGl~~GD~I~~ing~~ 66 (113)
T 2pzd_A 43 ILGSPAHRAGLRPGDVILAIGEQM 66 (113)
T ss_dssp BTTSHHHHHTCCTTCEEEEETTEE
T ss_pred CCCChHHHcCCCCCCEEEEECCEE
Confidence 358889999999999999999744
No 187
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=24.39 E-value=65 Score=20.35 Aligned_cols=30 Identities=27% Similarity=0.546 Sum_probs=25.0
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
-+||.-=..|++.+-+| ++.-|.|++||.-
T Consensus 50 gv~V~~V~~~spA~~aG~l~~GD~Il~ing~ 80 (117)
T 2o2t_A 50 GIFVQEIQEGSVAHRDGRLKETDQILAINGQ 80 (117)
T ss_dssp EEEECCCCTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCE
Confidence 46666556789999999 9999999999964
No 188
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=24.36 E-value=76 Score=21.87 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=26.8
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDPE 82 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp~ 82 (108)
+.++|.-=..|++.+.+| ++.-|.|++||..+=
T Consensus 36 ~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v 69 (196)
T 1p1d_A 36 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPT 69 (196)
T ss_dssp CSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC
Confidence 346666667789999999 999999999996543
No 189
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.32 E-value=51 Score=20.47 Aligned_cols=31 Identities=26% Similarity=0.360 Sum_probs=25.1
Q ss_pred ceEEeeccchhhHhhh-ccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLA-GMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~-Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++.+.+ |++.-|.|++||..+
T Consensus 36 ~v~V~~V~~~spA~~agGL~~GD~I~~ing~~ 67 (100)
T 2edp_A 36 PLTVSKIEDGGKAALSQKMRTGDELVNINGTP 67 (100)
T ss_dssp EEEECCCCTTSHHHHHTSCCTTCEEEEETTEE
T ss_pred CeEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 3566544578899999 999999999999764
No 190
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=24.04 E-value=41 Score=26.13 Aligned_cols=44 Identities=18% Similarity=0.450 Sum_probs=33.8
Q ss_pred cceeeeccCeeeCcce------------EEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 37 ETYISALKASQLIPEL------------YIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 37 ~~~igg~SGktV~P~l------------Yia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-.|+| ++.+.+.|++ +|.==..|++..-+|++.-|.|++||--+
T Consensus 239 ~~~lG-v~~~~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~ 294 (345)
T 3stj_A 239 RGLLG-IKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKP 294 (345)
T ss_dssp CEECC-EEEEECCHHHHHHTTCSCCSSEEEEEECTTSHHHHHTCCTTCEECEETTEE
T ss_pred ccccc-eeeEeecHHHHHhcCCCCCceEEEEEeccCChHHHcCCCCCCEEEEECCEE
Confidence 34666 7788777653 55555568899999999999999999753
No 191
>1ybf_A AMP nucleosidase; structural genomics, protein structure initiative, PSI, NEW research center for structural genomics, nysgxrc; 2.90A {Bacteroides thetaiotaomicron} SCOP: c.56.2.1
Probab=23.82 E-value=83 Score=23.35 Aligned_cols=36 Identities=14% Similarity=0.237 Sum_probs=26.3
Q ss_pred eeCcceEEeeccchhhHhhhccCCCCeEEE---ecCCCCCC
Q psy15576 47 QLIPELYIAVGISGAIQHLAGMKDSKTIVA---INKDPEAP 84 (108)
Q Consensus 47 tV~P~lYia~GISGA~QH~~Gm~~s~~IIA---IN~Dp~Ap 84 (108)
...|+..|.+|++|++|- .++--|+||+ ++.|-..+
T Consensus 85 ~~gv~~iI~~GtaGgl~~--~i~~GDvVi~~~~i~~d~~~~ 123 (268)
T 1ybf_A 85 AIHPKAVIFLGKCGGLKL--ENALGDYLLPIAAIRGEGTSN 123 (268)
T ss_dssp TTCCSEEEEEEEECCSSC--TTCTTCEEEEEEEEECSSTGG
T ss_pred HcCCCEEEEEEeeecCCC--CCCCCcEEEEhhheecCCCcc
Confidence 356899999999999985 5666777774 56555443
No 192
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.55 E-value=83 Score=19.22 Aligned_cols=31 Identities=29% Similarity=0.415 Sum_probs=25.0
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
.++|+-=..|++.+.+| ++.-|.|++||..+
T Consensus 30 ~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~ 61 (91)
T 2e7k_A 30 ELVIARILHGGMVAQQGLLHVGDIIKEVNGQP 61 (91)
T ss_dssp SEEEEEECSSSHHHHHCCCCTTCEEEEETTEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 46666656788999987 99999999999653
No 193
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=23.33 E-value=72 Score=20.55 Aligned_cols=30 Identities=17% Similarity=0.113 Sum_probs=25.1
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
.++|.-=..|++.+.+| ++.-|.|++||..
T Consensus 46 ~~~V~~V~~~spA~~aG~L~~GD~I~~ing~ 76 (122)
T 1v5q_A 46 PPLISYIEADSPAERCGVLQIGDRVMAINGI 76 (122)
T ss_dssp CCEEEEECTTSHHHHSCCCCTTCCEEEETTE
T ss_pred CcEEEEECCCChHHHcCCCCCCCEEEEECCE
Confidence 35666556789999999 9999999999964
No 194
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=23.29 E-value=82 Score=22.13 Aligned_cols=30 Identities=13% Similarity=0.378 Sum_probs=26.6
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
-+||.-=+.|.+.+.+| ++--|.|++||..
T Consensus 112 gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~ 142 (170)
T 3egg_C 112 GIFVKTVTEGGAAHRDGRIQVNDLLVEVDGT 142 (170)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCE
Confidence 47888778899999999 9999999999954
No 195
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=23.22 E-value=76 Score=20.46 Aligned_cols=29 Identities=28% Similarity=0.283 Sum_probs=24.7
Q ss_pred eEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 52 LYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 52 lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
+||.-=..|++.+.+| ++.-|.|++||.-
T Consensus 46 v~V~~V~~~spA~~aG~L~~GD~Il~Vng~ 75 (123)
T 1ueq_A 46 LQVKSVIPDGPAAQDGKMETGDVIVYINEV 75 (123)
T ss_dssp CEEEEECTTSHHHHTSCCCTTCEEEEETTE
T ss_pred EEEEEECCCCHHHHCCCCCCCCEEEEECCE
Confidence 6666556788999999 9999999999963
No 196
>4g41_A MTA/SAH nucleosidase; mixed alpha/beta, hydrolase, S-adenosylhomocysteine, cleavag; HET: MTA; 1.45A {Streptococcus pyogenes}
Probab=23.12 E-value=63 Score=22.91 Aligned_cols=37 Identities=24% Similarity=0.406 Sum_probs=27.0
Q ss_pred eCcceEEeeccchhhHhhhccCCCCeEEE---ecCCCCCCcc
Q psy15576 48 LIPELYIAVGISGAIQHLAGMKDSKTIVA---INKDPEAPIF 86 (108)
Q Consensus 48 V~P~lYia~GISGA~QH~~Gm~~s~~IIA---IN~Dp~ApIf 86 (108)
..|+..|.+|+.|+++. .++--|+||+ ++.|-+.+-+
T Consensus 71 ~~~~~ii~~G~aGgl~~--~i~~GDvvi~~~~i~~d~~~~~~ 110 (236)
T 4g41_A 71 FKAQAIINTGSAGAVAS--HLAIGDVVVADRLVYHDVDATAF 110 (236)
T ss_dssp TCCSEEEEEEEECBCST--TCCTTCEEEEEEEEESSCBCGGG
T ss_pred CCCCEEEEEeeecCCCC--CCCCCeEEEEeeeEEcCCCCCcc
Confidence 46899999999999974 5666688876 6666554433
No 197
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=23.08 E-value=92 Score=20.77 Aligned_cols=32 Identities=22% Similarity=0.439 Sum_probs=26.8
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
+-+||+-=.-|++...+| ++.-|.|++||.-+
T Consensus 35 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~ 67 (196)
T 3gsl_A 35 PSIFITKIIPGGAAAQDGRLRVNDSILFVNEVD 67 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEE
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEE
Confidence 446777667899999999 99999999999653
No 198
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=22.72 E-value=45 Score=22.59 Aligned_cols=45 Identities=18% Similarity=0.220 Sum_probs=33.0
Q ss_pred ceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 51 ELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
++.|++--||-...+.-. +++ .+|+|-.+++.|+.+.||+.+.-.
T Consensus 118 d~vI~iS~SG~t~~~~~~~~~ak~~g~-~vI~IT~~~~s~L~~~ad~~l~~~ 168 (198)
T 2xbl_A 118 DVLIGYSTSGKSPNILAAFREAKAKGM-TCVGFTGNRGGEMRELCDLLLEVP 168 (198)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHTTC-EEEEEECSCCCTHHHHCSEEEECS
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCC-eEEEEECCCCCcHHHhCCEEEEeC
Confidence 788999989954433211 233 478888889999999999988654
No 199
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=22.70 E-value=83 Score=20.99 Aligned_cols=31 Identities=26% Similarity=0.442 Sum_probs=26.5
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-+||.-=..|++...+| ++.-|.|++||..+
T Consensus 131 gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~ 162 (196)
T 3gsl_A 131 SIYVTKIIEGGAAHKDGRLQIGDKILAVNSVG 162 (196)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEE
T ss_pred CEEEEEECCCChHHhcCCCCCCCEEEEECCCc
Confidence 36777777889999999 99999999999754
No 200
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=22.61 E-value=87 Score=20.23 Aligned_cols=30 Identities=20% Similarity=0.402 Sum_probs=25.4
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKD 80 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~D 80 (108)
-+||.-=..|++.+.+| ++.-|.|++||..
T Consensus 54 gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~ 84 (117)
T 2fne_A 54 PIYVKTVFAKGAASEDGRLKRGDQIIAVNGQ 84 (117)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCE
Confidence 36776666789999999 9999999999964
No 201
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=22.45 E-value=69 Score=21.64 Aligned_cols=32 Identities=16% Similarity=0.283 Sum_probs=26.3
Q ss_pred cceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 50 PELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 50 P~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
+.++|.-=+.|.+.+.+| ++.-|.|++||-.+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~ 81 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHAN 81 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSC
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 446666667899999999 99999999999653
No 202
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=22.41 E-value=32 Score=23.71 Aligned_cols=45 Identities=20% Similarity=0.403 Sum_probs=34.3
Q ss_pred ceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 51 ELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
++.|++--||-...+.-. +++ .||+|-.+++.|+-+.||+.+.-.
T Consensus 94 dvvI~iS~sG~t~~~~~~~~~ak~~g~-~vi~IT~~~~s~l~~~ad~~l~~~ 144 (201)
T 3fxa_A 94 DILILISKGGNTGELLNLIPACKTKGS-TLIGVTENPDSVIAKEADIFFPVS 144 (201)
T ss_dssp CEEEEECSSSCCHHHHTTHHHHHHHTC-EEEEEESCTTSHHHHHCSEEEECC
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCC-eEEEEECCCCChhHHhCCEEEEcC
Confidence 788999999965544321 133 588999999999999999998643
No 203
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=22.32 E-value=86 Score=20.52 Aligned_cols=31 Identities=13% Similarity=0.303 Sum_probs=25.9
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
-++|.-=..|++...+|++.-|.|++||..+
T Consensus 52 gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~ 82 (124)
T 3tsv_A 52 GIFVAGVLEDSPAAKEGLEEGDQILRVNNVD 82 (124)
T ss_dssp CEEEEEECTTCHHHHTTCCTTEEEEEETTEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 4667665678999999999999999999754
No 204
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=22.23 E-value=78 Score=20.42 Aligned_cols=31 Identities=23% Similarity=0.511 Sum_probs=25.9
Q ss_pred ceEEeeccchhhHhhhc-cCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAG-MKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~G-m~~s~~IIAIN~Dp 81 (108)
-+||.-=..|.+.+.+| ++.-|.|++||.-+
T Consensus 55 gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~ 86 (128)
T 2db5_A 55 DIFVKDVQPGSVADRDQRLKENDQILAINHTP 86 (128)
T ss_dssp EEEEECCCTTSHHHHTCCCCSSCBEEEESSCB
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEE
Confidence 46776666789999999 99999999999743
No 205
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=21.98 E-value=1.1e+02 Score=23.75 Aligned_cols=47 Identities=21% Similarity=0.256 Sum_probs=34.6
Q ss_pred CcceEEeeccchhhHhhhcc------C-CCCeEEEecCCCCCCcccccCeeEeee
Q psy15576 49 IPELYIAVGISGAIQHLAGM------K-DSKTIVAINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm------~-~s~~IIAIN~Dp~ApIf~~ADygiVgD 96 (108)
..+|.|++--||-..-+.-. + ++ .+|+|-++++.|+-+.||+.+.-.
T Consensus 97 ~~dlvI~iS~SG~T~e~l~a~~~ak~~~Ga-~vIaIT~~~~S~La~~ad~~l~~~ 150 (373)
T 2aml_A 97 HLDLVIGISQSGQSTSTISALERVKKEASV-PVVALTSDVTSEIAEFADITLDIG 150 (373)
T ss_dssp TCCEEEEECSSSCBHHHHHHHHHHHHHCCC-CEEEEESCTTSGGGGGCSEEEECS
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHhCCC-cEEEEECCCCChHHHhcCcceecC
Confidence 34799999999965443211 1 33 478888889999999999988653
No 206
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=21.97 E-value=65 Score=20.48 Aligned_cols=30 Identities=17% Similarity=0.292 Sum_probs=25.5
Q ss_pred eEEeeccchhhHhhh--ccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLA--GMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~--Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+ |++.-|.|++||..+
T Consensus 43 v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~ 74 (119)
T 2cs5_A 43 VIVSRVAPGTPADLCVPRLNEGDQVVLINGRD 74 (119)
T ss_dssp EEEEEECSSSTTTSSSSCCCTTCEEEEETTBC
T ss_pred eEEEEECCCCHHHHhhcCCCCCCEEEEECCEE
Confidence 677666788899998 999999999999754
No 207
>3ddo_A Urdpase, upase, uridine phosphorylase; transferase, cytoplasm, glycosyltransferase; 1.50A {Salmonella typhimurium} SCOP: c.56.2.1 PDB: 1ryz_A 1sj9_A* 1y1q_A* 1y1s_A 1y1r_A 1zl2_A* 2hn9_A 1y1t_A* 2hsw_A 2hwu_A* 2pga_A* 2hrd_A 3dps_A 3fwp_A* 3nsr_A* 3c74_A* 2qdk_A 2iq5_A 2oec_A* 2i8a_A ...
Probab=21.96 E-value=88 Score=23.06 Aligned_cols=38 Identities=24% Similarity=0.378 Sum_probs=27.6
Q ss_pred eCcceEEeeccchhhHhhhccCCCCeEEE---ecCCCCCCccc
Q psy15576 48 LIPELYIAVGISGAIQHLAGMKDSKTIVA---INKDPEAPIFQ 87 (108)
Q Consensus 48 V~P~lYia~GISGA~QH~~Gm~~s~~IIA---IN~Dp~ApIf~ 87 (108)
..|+..|.+|++|+++. .++--|+||+ +|.|...+-|.
T Consensus 84 ~g~~~ii~~G~aGgl~~--~~~~Gdvvi~~~~i~~dg~~~~y~ 124 (253)
T 3ddo_A 84 LGIRTFLRIGTTGAIQP--HINVGDVLVTTASVRLDGASLHFA 124 (253)
T ss_dssp TTCCEEEEEEEECCCST--TCCTTCEEEEEEEEEESSGGGGTS
T ss_pred cCCCEEEEEEeeccCCC--CCCCCeEEEechheeCCCcccccC
Confidence 47899999999999974 5666677774 67676554443
No 208
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=21.82 E-value=77 Score=22.07 Aligned_cols=33 Identities=27% Similarity=0.272 Sum_probs=27.3
Q ss_pred CcceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 49 IPELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 49 ~P~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
.+.+||.-=..|++.+.+|++.-|.|++||.-+
T Consensus 109 ~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~ 141 (192)
T 3k1r_A 109 GCGLFISHLIKGGQADSVGLQVGDEIVRINGYS 141 (192)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTEEEEEETTEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEE
Confidence 345777776788999999999999999999643
No 209
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=21.71 E-value=46 Score=23.36 Aligned_cols=49 Identities=8% Similarity=0.152 Sum_probs=34.7
Q ss_pred eCc-ceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeeeH
Q psy15576 48 LIP-ELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVADL 97 (108)
Q Consensus 48 V~P-~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD~ 97 (108)
+.| ++.|++--||-..-+.-. +++ .+|+|-.+++.|+.+.||+.+.-..
T Consensus 129 ~~~~DvvI~iS~SG~t~~~i~~~~~ak~~G~-~vIaIT~~~~s~La~~aD~~l~~~~ 184 (212)
T 2i2w_A 129 GREGDVLLGISTSGNSANVIKAIAAAREKGM-KVITLTGKDGGKMAGTADIEIRVPH 184 (212)
T ss_dssp CCTTCEEEEECSSSCCHHHHHHHHHHHHHTC-EEEEEEETTCGGGTTCSSEEEEECC
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHCCC-eEEEEECCCCCchHHhCCEEEEcCC
Confidence 344 788999999954433211 234 4778877889999999999986554
No 210
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=21.58 E-value=51 Score=20.52 Aligned_cols=31 Identities=23% Similarity=0.151 Sum_probs=24.1
Q ss_pred ceEEeeccchhhHhhhccCCCCeEEEecCCC
Q psy15576 51 ELYIAVGISGAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 51 ~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
.++|.-=..|++.+.+|++.-|.|++||.-+
T Consensus 30 ~~~V~~V~~~spA~~aGL~~GD~I~~ing~~ 60 (103)
T 1v5l_A 30 PLVITRITPGSKAAAANLCPGDVILAIDGFG 60 (103)
T ss_dssp EEECSCBCTTSTTGGGTCCTTCBEEEETTEE
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 3455444567888889999999999999743
No 211
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=21.48 E-value=78 Score=21.75 Aligned_cols=30 Identities=17% Similarity=0.052 Sum_probs=24.8
Q ss_pred eEEeeccchhhHhhh-ccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLA-GMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~-Gm~~s~~IIAIN~Dp 81 (108)
+||.-=..|++.+.+ |++.-|.|++||--+
T Consensus 35 ~~V~~v~~~spA~~aggl~~GD~I~~vng~~ 65 (200)
T 2qt5_A 35 PRVSNLRQGGIAARSDQLDVGDYIKAVNGIN 65 (200)
T ss_dssp SEEEEECTTSHHHHTTSCCTTCEEEEETTEE
T ss_pred eEEEEECCCChHHhcCCCCCCCEEEEECCEE
Confidence 566666678899998 999999999999643
No 212
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=21.43 E-value=22 Score=29.02 Aligned_cols=29 Identities=24% Similarity=0.568 Sum_probs=20.6
Q ss_pred Eeeccch----hhHhh--hccCCCCeEEEecCCCCC
Q psy15576 54 IAVGISG----AIQHL--AGMKDSKTIVAINKDPEA 83 (108)
Q Consensus 54 ia~GISG----A~QH~--~Gm~~s~~IIAIN~Dp~A 83 (108)
..+|+.| +++|| .|+++.++ |++|+|.++
T Consensus 15 ~vIGvGg~G~navn~m~~~gi~gv~f-ia~NTD~q~ 49 (382)
T 2vxy_A 15 KVIGVGGGGNNAVNRMIENEVQGVEY-IAVNTDAQA 49 (382)
T ss_dssp EEEEEHHHHHHHHHHHHHTTCCSCEE-EEEESBHHH
T ss_pred EEEeeCchHHHHHHHHHHhCCCCCCE-EEEeCCHHH
Confidence 4455555 67776 57888875 789999874
No 213
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=21.39 E-value=73 Score=20.88 Aligned_cols=30 Identities=13% Similarity=0.132 Sum_probs=23.4
Q ss_pred eEEeeccc--hhhHhhhccCCCCeEEEecCCC
Q psy15576 52 LYIAVGIS--GAIQHLAGMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GIS--GA~QH~~Gm~~s~~IIAIN~Dp 81 (108)
++|.-=.. |++...+|++.-|.|++||.-+
T Consensus 46 v~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~ 77 (118)
T 2yub_A 46 VQVKEVNRMHISPNNRNAIHPGDRILEINGTP 77 (118)
T ss_dssp EEEEECCTTTSCTTHHHHCCTTCCEEEESSSB
T ss_pred EEEEEecCCCCChHHHcCCCCCCEEEEECCEE
Confidence 45544334 7888999999999999999754
No 214
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=21.28 E-value=35 Score=23.86 Aligned_cols=49 Identities=14% Similarity=0.301 Sum_probs=36.0
Q ss_pred eCc-ceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeeeH
Q psy15576 48 LIP-ELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVADL 97 (108)
Q Consensus 48 V~P-~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD~ 97 (108)
+.| ++.|++--||-...+.-+ +++ .||+|-.+++.|+.+.||+.+.-..
T Consensus 87 ~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~-~vI~IT~~~~s~La~~ad~~l~~~~ 142 (200)
T 1vim_A 87 ITDQDVLVGISGSGETTSVVNISKKAKDIGS-KLVAVTGKRDSSLAKMADVVMVVKG 142 (200)
T ss_dssp CCTTCEEEEECSSSCCHHHHHHHHHHHHHTC-EEEEEESCTTSHHHHHCSEEEECCS
T ss_pred CCCCCEEEEEeCCCCcHHHHHHHHHHHHCCC-eEEEEECCCCChHHHhCCEEEEECC
Confidence 444 789999999965544222 234 4788988999999999999986543
No 215
>1t8s_A AMP nucleosidase; alpha-beta-alpha sandwich, alpha-beta fold, hydrolase; HET: FMP; 2.60A {Escherichia coli} SCOP: c.56.2.1 PDB: 1t8r_A* 1t8w_A 1t8y_A 2guw_A
Probab=21.27 E-value=89 Score=26.26 Aligned_cols=37 Identities=16% Similarity=0.393 Sum_probs=27.8
Q ss_pred eCcceEEeeccchhhHhhhccCCCCeEEE---ecCCCCCCcc
Q psy15576 48 LIPELYIAVGISGAIQHLAGMKDSKTIVA---INKDPEAPIF 86 (108)
Q Consensus 48 V~P~lYia~GISGA~QH~~Gm~~s~~IIA---IN~Dp~ApIf 86 (108)
..|+..|.+|++|+++. .++--|+||+ |+.|-.+.-|
T Consensus 295 ~gvk~II~vGtAGgL~~--di~lGDVVIa~~ai~~Dg~~~~y 334 (484)
T 1t8s_A 295 LRPDVWLMIGHCGGLRE--SQAIGDYVLAHAYLRDDHVLDAV 334 (484)
T ss_dssp GCCSEEEECCEEEECST--TCCTTCEEEEEEEEEECCTTTTT
T ss_pred cCCCEEEEEEEeeccCC--CCcCCEEEEEeeEEECCCCcccc
Confidence 67999999999999985 5666778885 6666654433
No 216
>3qpb_A Uridine phosphorylase; hexamer, NP-I superfamily, pyrimidine salvage pathway, uridi phosphorylase, transition state; HET: R1P; 1.82A {Streptococcus pyogenes serotype M6}
Probab=20.94 E-value=93 Score=23.68 Aligned_cols=47 Identities=23% Similarity=0.405 Sum_probs=31.3
Q ss_pred eCcceEEeeccchhhHhhhccCCCCeEE---EecCCCCCCcccccCeeEeee
Q psy15576 48 LIPELYIAVGISGAIQHLAGMKDSKTIV---AINKDPEAPIFQVSDYGLVAD 96 (108)
Q Consensus 48 V~P~lYia~GISGA~QH~~Gm~~s~~II---AIN~Dp~ApIf~~ADygiVgD 96 (108)
..|+..|.+|++|+++- .++--|+|| +|+.|...+-|.-.+|..+.|
T Consensus 110 ~g~~~iI~~G~aGgl~~--~~~~GDvVi~~~ai~~dg~~~~y~~~~~p~~~d 159 (282)
T 3qpb_A 110 CGADTFIRVGTCGGIEL--DVKGGDIVIATGAIRMEGTSKEYAPIEFPAVAD 159 (282)
T ss_dssp TTCCEEEEEEEEEECST--TCCTTCEEEEEEEEEESSTGGGTSCTTSCEECC
T ss_pred cCCCEEEEeeeeecCCC--CCCCCcEEEeeeeeecCCcccccCCCccCCCCC
Confidence 46889999999999984 466667777 477776555444334444444
No 217
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=20.67 E-value=47 Score=27.12 Aligned_cols=35 Identities=20% Similarity=0.396 Sum_probs=23.8
Q ss_pred Eeeccch----hhHhh--hccCCCCeEEEecCCCCCCccccc
Q psy15576 54 IAVGISG----AIQHL--AGMKDSKTIVAINKDPEAPIFQVS 89 (108)
Q Consensus 54 ia~GISG----A~QH~--~Gm~~s~~IIAIN~Dp~ApIf~~A 89 (108)
+.+|+.| +++|| .|+++.++ +++|+|.++--+..+
T Consensus 15 ~vIGvGg~G~n~vn~m~~~gi~gv~f-ia~NTD~q~L~~~~a 55 (394)
T 2vaw_A 15 KVIGVGGGGGNAVNHMAKNNVEGVEF-ICANTDAQALKNIAA 55 (394)
T ss_dssp EEEEEHHHHHHHHHHHHTTTCCSEEE-EEEESCTTTTSSCSS
T ss_pred EEECcCchHHHHHHHHHHcCCCCCCE-EEecCCHHHHhcCCC
Confidence 4555555 57776 57777764 789999987655444
No 218
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=20.50 E-value=91 Score=19.43 Aligned_cols=30 Identities=20% Similarity=0.233 Sum_probs=23.6
Q ss_pred eEEeeccchhhHhhh-ccCCCCeEEEecCCC
Q psy15576 52 LYIAVGISGAIQHLA-GMKDSKTIVAINKDP 81 (108)
Q Consensus 52 lYia~GISGA~QH~~-Gm~~s~~IIAIN~Dp 81 (108)
++|.-=..|++.+.+ |++.-|.|++||..+
T Consensus 37 ~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~ 67 (103)
T 2dc2_A 37 ILISEIHPGQPADRCGGLHVGDAILAVNGVN 67 (103)
T ss_dssp EEEEEECTTSHHHHHTCCCSSEEEEEETTEE
T ss_pred EEEEEECCCCHHHHhCCCCCCCEEEEECCEE
Confidence 455555668888884 999999999999654
No 219
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=20.42 E-value=27 Score=27.62 Aligned_cols=25 Identities=28% Similarity=0.376 Sum_probs=22.2
Q ss_pred EEEecCCCCCCcccccCeeEeeeHH
Q psy15576 74 IVAINKDPEAPIFQVSDYGLVADLF 98 (108)
Q Consensus 74 IIAIN~Dp~ApIf~~ADygiVgD~~ 98 (108)
+++++.|+++|-+++||..++.|+.
T Consensus 61 v~v~d~~~~~p~~~~ad~~~~~~~~ 85 (419)
T 4e4t_A 61 VAVLDPDPASPAGAVADRHLRAAYD 85 (419)
T ss_dssp EEEECSCTTCHHHHHSSEEECCCTT
T ss_pred EEEECCCCcCchhhhCCEEEECCcC
Confidence 6788999999999999999998764
No 220
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.27 E-value=31 Score=22.54 Aligned_cols=29 Identities=17% Similarity=0.349 Sum_probs=24.5
Q ss_pred eEEeeccchhhHhhhccCCCCeEEEecCC
Q psy15576 52 LYIAVGISGAIQHLAGMKDSKTIVAINKD 80 (108)
Q Consensus 52 lYia~GISGA~QH~~Gm~~s~~IIAIN~D 80 (108)
++|.-=..|++.+.+|++.-|.|++||.-
T Consensus 63 v~V~~V~~~spA~~aGL~~GD~I~~ing~ 91 (126)
T 2yuy_A 63 IFVKQVKEGGPAFEAGLCTGDRIIKVNGE 91 (126)
T ss_dssp CCBCCCCSSSHHHHHTCCSSCCCCEETTE
T ss_pred EEEEEECCCChHHHcCCCCCCEEEEECCE
Confidence 55655567899999999999999999964
Done!