BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15579
(368 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93615|ETFA_CAEEL Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=F27D4.1 PE=3
SV=2
Length = 332
Score = 165 bits (417), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 32/181 (17%)
Query: 18 KLSASTLSAITAAQKIGGDISVLVAGSKVADVSNAILTLKSKDPVKVVTVRGTSFPPAAK 77
KL S++S +T L AG NA+ +KS P+K++T RGTSF PA +
Sbjct: 127 KLDVSSISDVTEVHSADSFTRTLYAG-------NAVKKVKSTAPIKLLTFRGTSFEPAKE 179
Query: 78 GGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTL 137
GGS +VE +A ++ + LSE++GQELSKS+RPDL +AK+VVSGGRGLK
Sbjct: 180 GGSGAVENAPSADIKTD-LSEFLGQELSKSERPDLATAKVVVSGGRGLK----------- 227
Query: 138 ADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQ 197
S DNFKL+Y LADKLGA VGASRAAVDAG+VPNDMQ+GQTGKI+AP+
Sbjct: 228 -------------SGDNFKLIYDLADKLGAGVGASRAAVDAGYVPNDMQVGQTGKIVAPE 274
Query: 198 V 198
+
Sbjct: 275 L 275
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 63/84 (75%)
Query: 276 QVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAA 335
QV+K++GV +VL +++ LK LPE +AP+I+++Q +T I AG+S+ G+ ++PRVAA
Sbjct: 67 QVAKVNGVKRVLVAQDEKLKNNLPERVAPVILASQKQFNFTAITAGSSAFGRGVIPRVAA 126
Query: 336 LLDVSPISDIIDIKSPDTFVRTIY 359
LDVS ISD+ ++ S D+F RT+Y
Sbjct: 127 KLDVSSISDVTEVHSADSFTRTLY 150
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 64/89 (71%)
Query: 194 IAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPR 253
+A QV+K++GV +VL +++ LK LPE +AP+I+++Q +T I AG+S+ G+ ++PR
Sbjct: 64 VAEQVAKVNGVKRVLVAQDEKLKNNLPERVAPVILASQKQFNFTAITAGSSAFGRGVIPR 123
Query: 254 VAALLDVSPISDIIDIKSPDTFQVSKISG 282
VAA LDVS ISD+ ++ S D+F + +G
Sbjct: 124 VAAKLDVSSISDVTEVHSADSFTRTLYAG 152
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 2 AARFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSNAI 53
A+R ST+++ EH + KL+ TL+AITAA K+G ++SVLV G+ V+ +
Sbjct: 17 ASRLNSTLVVAEHDETKLAPITLNAITAASKLGNEVSVLVTGANATKVAEQV 68
>sp|P13804|ETFA_HUMAN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Homo
sapiens GN=ETFA PE=1 SV=1
Length = 333
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 106/157 (67%), Gaps = 29/157 (18%)
Query: 51 NAILTLKSKDPVKVVTVRGTSFPPAA-KGGSASVEALANAS-VEANKLSEWVGQELSKSD 108
NA+ T+K + VKV +VRGTSF AA GGSAS E ++ S VE +SEW+ Q+L+KSD
Sbjct: 152 NALCTVKCDEKVKVFSVRGTSFDAAATSGGSASSEKASSTSPVE---ISEWLDQKLTKSD 208
Query: 109 RPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAA 168
RP+L AK+VVSGGRGLK S +NFKLLY LAD+L AA
Sbjct: 209 RPELTGAKVVVSGGRGLK------------------------SGENFKLLYDLADQLHAA 244
Query: 169 VGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
VGASRAAVDAGFVPNDMQ+GQTGKI+AP++ G++
Sbjct: 245 VGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGIS 281
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 66/83 (79%)
Query: 277 VSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAAL 336
+ K++G+ KVL ++D KGLLPE L PLI++ Q YTHI AGAS+ GK+LLPRVAA
Sbjct: 67 LCKVAGIAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAK 126
Query: 337 LDVSPISDIIDIKSPDTFVRTIY 359
L+V+PISDII IKSPDTFVRTIY
Sbjct: 127 LEVAPISDIIAIKSPDTFVRTIY 149
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
Query: 194 IAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPR 253
+A + K++G+ KVL ++D KGLLPE L PLI++ Q YTHI AGAS+ GK+LLPR
Sbjct: 63 VAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPR 122
Query: 254 VAALLDVSPISDIIDIKSPDTFQVSKISGVTKVLTVEND 292
VAA L+V+PISDII IKSPDTF V I + TV+ D
Sbjct: 123 VAAKLEVAPISDIIAIKSPDTF-VRTIYAGNALCTVKCD 160
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 4 RFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSN 51
RF+ST++I EHA+ L+ TL+ ITAA ++GG++S LVAG+K V+
Sbjct: 18 RFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQ 65
>sp|Q9HZP7|ETFA_PSEAE Electron transfer flavoprotein subunit alpha OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=etfA PE=3 SV=1
Length = 309
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 109/156 (69%), Gaps = 27/156 (17%)
Query: 51 NAILTLKSKDPVKVVTVRGTSFPP-AAKGGSASVEALANASVEANKLSEWVGQELSKSDR 109
NAI T++S VKV+TVR T F AA+GGSA+VE ++ + +A K S +VG+EL+KSDR
Sbjct: 131 NAIATVQSSAAVKVITVRTTGFDAVAAEGGSAAVEQVSGPA-DAGK-SAFVGEELAKSDR 188
Query: 110 PDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAV 169
P+L +AKIVVSGGRG+++ D NFK+LY LADKLGAAV
Sbjct: 189 PELTAAKIVVSGGRGMQNGD------------------------NFKILYALADKLGAAV 224
Query: 170 GASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
GASRAAVDAGFVPNDMQ+GQTGKI+APQ+ G++
Sbjct: 225 GASRAAVDAGFVPNDMQVGQTGKIVAPQLYIAVGIS 260
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 282 GVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSP 341
GV+KVL +N A LPEN+APLI A+ Y+H+LA A++ GK+ LPRVAALLDV
Sbjct: 53 GVSKVLVADNAAYAHQLPENVAPLI--AELGKNYSHVLAPATTNGKNFLPRVAALLDVDQ 110
Query: 342 ISDIIDIKSPDTFVRTIY 359
IS+I+++ SPDTF R IY
Sbjct: 111 ISEIVEVVSPDTFKRPIY 128
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 203 GVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSP 262
GV+KVL +N A LPEN+APLI A+ Y+H+LA A++ GK+ LPRVAALLDV
Sbjct: 53 GVSKVLVADNAAYAHQLPENVAPLI--AELGKNYSHVLAPATTNGKNFLPRVAALLDVDQ 110
Query: 263 ISDIIDIKSPDTFQVSKISGVTKVLTVENDA 293
IS+I+++ SPDTF+ +G + TV++ A
Sbjct: 111 ISEIVEVVSPDTFKRPIYAG-NAIATVQSSA 140
>sp|Q8HXY0|ETFA_MACFA Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Macaca fascicularis GN=ETFA PE=2 SV=1
Length = 333
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 106/157 (67%), Gaps = 29/157 (18%)
Query: 51 NAILTLKSKDPVKVVTVRGTSFPPAA-KGGSASVEALANAS-VEANKLSEWVGQELSKSD 108
NA+ T+K + VKV +VRGTSF AA GG+AS E ++ S VE +SEW+ Q+L+KSD
Sbjct: 152 NALCTVKCDEKVKVFSVRGTSFEAAATSGGTASSEKASSTSPVE---ISEWLDQKLTKSD 208
Query: 109 RPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAA 168
RP+L AK+VVSGGRGLK S +NFKLLY LAD+L AA
Sbjct: 209 RPELTGAKVVVSGGRGLK------------------------SGENFKLLYDLADQLHAA 244
Query: 169 VGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
VGASRAAVDAGFVPNDMQ+GQTGKI+AP++ G++
Sbjct: 245 VGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGIS 281
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 67/83 (80%)
Query: 277 VSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAAL 336
+ K++G+ KVL ++DA +GLL E+L PLI++ Q YTHI AGAS+ GK+LLPRVAA
Sbjct: 67 LCKVAGIAKVLVAQHDAYRGLLAEDLTPLILATQKQFNYTHICAGASAFGKNLLPRVAAK 126
Query: 337 LDVSPISDIIDIKSPDTFVRTIY 359
L+V+PISDII IKSPDTFVRTIY
Sbjct: 127 LEVAPISDIIAIKSPDTFVRTIY 149
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Query: 194 IAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPR 253
+A + K++G+ KVL ++DA +GLL E+L PLI++ Q YTHI AGAS+ GK+LLPR
Sbjct: 63 VAQDLCKVAGIAKVLVAQHDAYRGLLAEDLTPLILATQKQFNYTHICAGASAFGKNLLPR 122
Query: 254 VAALLDVSPISDIIDIKSPDTFQVSKISGVTKVLTVEND 292
VAA L+V+PISDII IKSPDTF V I + TV+ D
Sbjct: 123 VAAKLEVAPISDIIAIKSPDTF-VRTIYAGNALCTVKCD 160
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 4 RFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSN 51
RF+ST++I EHA+ L+ TL+ ITAA ++GG++S LVAG+K V+
Sbjct: 18 RFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQ 65
>sp|Q5RC31|ETFA_PONAB Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Pongo abelii GN=ETFA PE=2 SV=1
Length = 333
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 105/157 (66%), Gaps = 29/157 (18%)
Query: 51 NAILTLKSKDPVKVVTVRGTSFPPAA-KGGSASVEALANAS-VEANKLSEWVGQELSKSD 108
NA+ T+K + VKV +VRGTSF AA GGSAS E ++ S VE +SEW+ Q+L+KSD
Sbjct: 152 NALCTVKCDEKVKVFSVRGTSFEAAATSGGSASSEKASSTSPVE---ISEWLDQKLTKSD 208
Query: 109 RPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAA 168
RP+L AK+VVSGGRGLK S +NFKLLY LAD+ AA
Sbjct: 209 RPELTGAKVVVSGGRGLK------------------------SGENFKLLYDLADQRHAA 244
Query: 169 VGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
VGASRAAVDAGFVPNDMQ+GQTGKI+AP++ G++
Sbjct: 245 VGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGIS 281
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 66/83 (79%)
Query: 277 VSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAAL 336
+ K++G+ KVL ++D +GLLPE L PLI++ Q YTHI AGAS+ GK+LLPRVAA
Sbjct: 67 LCKVAGIAKVLVAQHDVYRGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAK 126
Query: 337 LDVSPISDIIDIKSPDTFVRTIY 359
L+V+PISDII IKSPDTFVRTIY
Sbjct: 127 LEVAPISDIIAIKSPDTFVRTIY 149
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
Query: 194 IAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPR 253
+A + K++G+ KVL ++D +GLLPE L PLI++ Q YTHI AGAS+ GK+LLPR
Sbjct: 63 VAQDLCKVAGIAKVLVAQHDVYRGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPR 122
Query: 254 VAALLDVSPISDIIDIKSPDTFQVSKISGVTKVLTVEND 292
VAA L+V+PISDII IKSPDTF V I + TV+ D
Sbjct: 123 VAAKLEVAPISDIIAIKSPDTF-VRTIYAGNALCTVKCD 160
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 4 RFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSN 51
RF+ST++I EHAD L+ TL+ ITAA ++GG++S LVAG+K V+
Sbjct: 18 RFQSTLVIAEHADDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQ 65
>sp|Q99LC5|ETFA_MOUSE Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus
musculus GN=Etfa PE=1 SV=2
Length = 333
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 101/155 (65%), Gaps = 25/155 (16%)
Query: 51 NAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRP 110
NA+ T+K + VKV +VRGTSF AA G ++ A +S +SEW+ Q+L+KSDRP
Sbjct: 152 NALCTVKCDEKVKVFSVRGTSFEAAATSGGSASSEKAPSSSSVG-ISEWLDQKLTKSDRP 210
Query: 111 DLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVG 170
+L AK+VVSGGRGLK S +NFKLLY LAD+L AAVG
Sbjct: 211 ELTGAKVVVSGGRGLK------------------------SGENFKLLYDLADQLHAAVG 246
Query: 171 ASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
ASRAAVDAGFVPNDMQ+GQTGKI+AP++ G++
Sbjct: 247 ASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGIS 281
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 67/83 (80%)
Query: 277 VSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAAL 336
+ K++GV KVL ++DA KGLLPE L PLI+ Q YTHI AGAS+ GK+LLPRVAA
Sbjct: 67 LCKVAGVAKVLVAQHDAYKGLLPEELTPLILETQKQFSYTHICAGASAFGKNLLPRVAAK 126
Query: 337 LDVSPISDIIDIKSPDTFVRTIY 359
L+V+P+SDII+IKSPDTFVRTIY
Sbjct: 127 LNVAPVSDIIEIKSPDTFVRTIY 149
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
Query: 194 IAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPR 253
+ + K++GV KVL ++DA KGLLPE L PLI+ Q YTHI AGAS+ GK+LLPR
Sbjct: 63 VVQDLCKVAGVAKVLVAQHDAYKGLLPEELTPLILETQKQFSYTHICAGASAFGKNLLPR 122
Query: 254 VAALLDVSPISDIIDIKSPDTFQVSKISGVTKVLTVEND 292
VAA L+V+P+SDII+IKSPDTF V I + TV+ D
Sbjct: 123 VAAKLNVAPVSDIIEIKSPDTF-VRTIYAGNALCTVKCD 160
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 4 RFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADV 49
RF+ST++I EHA+ L+ TL+ ITAA ++GG++S LVAG+K V
Sbjct: 18 RFQSTLVIAEHANDSLAPITLNTITAAGRLGGEVSCLVAGTKCDKV 63
>sp|P53573|ETFA_BRAJA Electron transfer flavoprotein subunit alpha OS=Bradyrhizobium
japonicum (strain USDA 110) GN=etfA PE=3 SV=2
Length = 314
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 102/155 (65%), Gaps = 25/155 (16%)
Query: 51 NAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRP 110
NAI T+KSKD KV+TVR ++F A +GGSA VE++ A+ LS +VG+E++KSDRP
Sbjct: 131 NAIQTVKSKDAKKVITVRTSTFAAAGEGGSAPVESVQAAADPG--LSSFVGEEVAKSDRP 188
Query: 111 DLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVG 170
+L SAKI+VSGGR ++S +NF K + LADKLGA VG
Sbjct: 189 ELTSAKIIVSGGRAMQSRENFA-----------------------KYIEPLADKLGAGVG 225
Query: 171 ASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
ASRAAVDAG+ PND Q+GQTGK++AP++ G++
Sbjct: 226 ASRAAVDAGYAPNDWQVGQTGKVVAPELYVAVGIS 260
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 283 VTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPI 342
V KVL + L E LA LIVS A Y I+A A+S K+++PRVAALLDV +
Sbjct: 54 VKKVLLADGALYAHDLAEPLAALIVSL--APSYDAIVAPATSRFKNVMPRVAALLDVMQV 111
Query: 343 SDIIDIKSPDTFVRTIY 359
S+II + +PDT+ R IY
Sbjct: 112 SEIIKVVAPDTYERPIY 128
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 204 VTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPI 263
V KVL + L E LA LIVS A Y I+A A+S K+++PRVAALLDV +
Sbjct: 54 VKKVLLADGALYAHDLAEPLAALIVSL--APSYDAIVAPATSRFKNVMPRVAALLDVMQV 111
Query: 264 SDIIDIKSPDTFQ 276
S+II + +PDT++
Sbjct: 112 SEIIKVVAPDTYE 124
>sp|P13803|ETFA_RAT Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Rattus norvegicus GN=Etfa PE=1 SV=4
Length = 333
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 102/155 (65%), Gaps = 25/155 (16%)
Query: 51 NAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRP 110
NA+ T+K + VKV +VRGTSF AA G ++ A +S A +SEW+ Q+L+KSDRP
Sbjct: 152 NALCTVKCDEKVKVFSVRGTSFEAAAASGGSASSEKAPSSSSAG-ISEWLDQKLTKSDRP 210
Query: 111 DLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVG 170
+L AK+VVSGGRGLK S +NFKLLY LAD+L AAVG
Sbjct: 211 ELTGAKVVVSGGRGLK------------------------SGENFKLLYDLADQLHAAVG 246
Query: 171 ASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
ASRAAVDAGFVPNDMQ+GQTGKI+AP++ G++
Sbjct: 247 ASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGIS 281
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 67/83 (80%)
Query: 277 VSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAAL 336
+ K++GV KVL ++DA KGLLPE L PLI+ Q YTHI AGAS+ GK+LLPRVAA
Sbjct: 67 LCKVAGVAKVLVAQHDAYKGLLPEELTPLILETQKQFSYTHICAGASAFGKNLLPRVAAK 126
Query: 337 LDVSPISDIIDIKSPDTFVRTIY 359
L+V+P+SDII+IKSPDTFVRTIY
Sbjct: 127 LNVAPVSDIIEIKSPDTFVRTIY 149
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
Query: 194 IAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPR 253
+ + K++GV KVL ++DA KGLLPE L PLI+ Q YTHI AGAS+ GK+LLPR
Sbjct: 63 VVQDLCKVAGVAKVLVAQHDAYKGLLPEELTPLILETQKQFSYTHICAGASAFGKNLLPR 122
Query: 254 VAALLDVSPISDIIDIKSPDTFQVSKISGVTKVLTVEND 292
VAA L+V+P+SDII+IKSPDTF V I + TV+ D
Sbjct: 123 VAAKLNVAPVSDIIEIKSPDTF-VRTIYAGNALCTVKCD 160
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 4 RFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADV 49
RF+ST++I EHA+ L+ TL+ ITAA ++GG++S LVAG+K V
Sbjct: 18 RFQSTLVIAEHANDSLAPITLNTITAAGRLGGEVSCLVAGTKCDKV 63
>sp|Q2KJE4|ETFA_BOVIN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Bos
taurus GN=ETFA PE=2 SV=1
Length = 333
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 101/155 (65%), Gaps = 25/155 (16%)
Query: 51 NAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRP 110
NAI T+K + VKV +VRGTSF AA G ++ A+++ +SEW+ Q+L+KSDRP
Sbjct: 152 NAICTVKCDEKVKVFSVRGTSFEAAAASGGSASSEKASSTSPVG-ISEWLDQKLTKSDRP 210
Query: 111 DLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVG 170
+L AK+VVSGGRGLK S +NFKLLY LAD+L AAVG
Sbjct: 211 ELTGAKVVVSGGRGLK------------------------SGENFKLLYDLADQLHAAVG 246
Query: 171 ASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
ASRAAVDAGFV ND+Q+GQTGKI+AP++ G++
Sbjct: 247 ASRAAVDAGFVTNDLQVGQTGKIVAPELYIAVGIS 281
Score = 118 bits (295), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 67/83 (80%)
Query: 277 VSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAAL 336
+ K++GV KVL ++DA KGLLPE L PLI++ Q +THI AGAS+ GK+LLPR+AA
Sbjct: 67 LCKVAGVAKVLVAQHDAYKGLLPEELTPLILATQKQFNHTHICAGASAFGKNLLPRIAAK 126
Query: 337 LDVSPISDIIDIKSPDTFVRTIY 359
LDV+PISDII IKSPDTFVRTIY
Sbjct: 127 LDVAPISDIIAIKSPDTFVRTIY 149
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Query: 194 IAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPR 253
+A + K++GV KVL ++DA KGLLPE L PLI++ Q +THI AGAS+ GK+LLPR
Sbjct: 63 VAQDLCKVAGVAKVLVAQHDAYKGLLPEELTPLILATQKQFNHTHICAGASAFGKNLLPR 122
Query: 254 VAALLDVSPISDIIDIKSPDTFQVSKISGVTKVLTVEND 292
+AA LDV+PISDII IKSPDTF V I + TV+ D
Sbjct: 123 IAAKLDVAPISDIIAIKSPDTF-VRTIYAGNAICTVKCD 160
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 4 RFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSN 51
RF+ST++I EHA+ L+ TL+ ITAA+ +GG++S LVAG+K V+
Sbjct: 18 RFQSTLVIAEHANDTLAPITLNTITAAKHLGGEVSCLVAGTKCDKVAQ 65
>sp|P38974|ETFA_PARDE Electron transfer flavoprotein subunit alpha OS=Paracoccus
denitrificans GN=etfA PE=1 SV=2
Length = 308
Score = 124 bits (312), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 95/155 (61%), Gaps = 26/155 (16%)
Query: 51 NAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRP 110
NAI +KSKD KV T+R SF A +GG+A V A A+ LS WV E+++SDRP
Sbjct: 131 NAIQVVKSKDAKKVFTIRTASFDAAGEGGTAPVTETAAAADPG--LSSWVADEVAESDRP 188
Query: 111 DLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVG 170
+L SA+ VVSGGRGL S ++ F ++ LADKLGAAVG
Sbjct: 189 ELTSARRVVSGGRGLGSKES------------------------FAIIEELADKLGAAVG 224
Query: 171 ASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
ASRAAVD+G+ PND Q+GQTGK++AP++ G++
Sbjct: 225 ASRAAVDSGYAPNDWQVGQTGKVVAPELYVAVGIS 259
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 283 VTKVLTVENDALKG-LLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSP 341
V KVL E DAL G L E A LIV AG Y+HI A A++ K+++PRVAALLDV
Sbjct: 54 VAKVLVAE-DALYGHRLAEPTAALIVGL--AGDYSHIAAPATTDAKNVMPRVAALLDVMV 110
Query: 342 ISDIIDIKSPDTFVRTIY 359
+SD+ I DTF R IY
Sbjct: 111 LSDVSAILDADTFERPIY 128
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 204 VTKVLTVENDALKG-LLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSP 262
V KVL E DAL G L E A LIV AG Y+HI A A++ K+++PRVAALLDV
Sbjct: 54 VAKVLVAE-DALYGHRLAEPTAALIVGL--AGDYSHIAAPATTDAKNVMPRVAALLDVMV 110
Query: 263 ISDIIDIKSPDTF----------QVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNA 312
+SD+ I DTF QV K KV T+ + AP+ +A A
Sbjct: 111 LSDVSAILDADTFERPIYAGNAIQVVKSKDAKKVFTIRTASFDAAGEGGTAPVTETAAAA 170
>sp|Q54FD7|ETFA_DICDI Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=etfa PE=3 SV=1
Length = 355
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 94/155 (60%), Gaps = 31/155 (20%)
Query: 51 NAILTLKSKDPVKVVTVRGTSFPPA-AKGGSASVEALANASVE--ANKLSE----WVGQE 103
NAI T+KS D KV TVR T+F A GGSA V + + +V +SE W E
Sbjct: 165 NAIATVKSTDKCKVGTVRTTAFDKAPTSGGSAKVVSANDWAVPLIEKAISETNIKWESSE 224
Query: 104 LSKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLAD 163
+ KS+RP+L SA++VVSGGRG+K+ + NFK+L LAD
Sbjct: 225 VKKSERPELTSARVVVSGGRGMKNGE------------------------NFKMLEELAD 260
Query: 164 KLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQV 198
LG AVGASRAAVD+GFV ND+Q+GQTGKI+AP++
Sbjct: 261 TLGGAVGASRAAVDSGFVSNDLQVGQTGKIVAPEL 295
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 277 VSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAG-----KYTHILAGASSMGKSLLP 331
VSK+SGVT V+ V++ L+ L E + P+IV Q++ + THI AS+ GK+ LP
Sbjct: 75 VSKVSGVTNVVCVDHPTLEHSLAETITPIIVKLQSSSSKEGDEITHIFTPASNFGKNFLP 134
Query: 332 RVAALLDVSPISDIIDIKSPDTFVRTIY 359
RVAALL+VS IS+I +K +TF R IY
Sbjct: 135 RVAALLNVSQISEITKVKDAETFQRPIY 162
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 194 IAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAG-----KYTHILAGASSMGK 248
+A VSK+SGVT V+ V++ L+ L E + P+IV Q++ + THI AS+ GK
Sbjct: 71 VADSVSKVSGVTNVVCVDHPTLEHSLAETITPIIVKLQSSSSKEGDEITHIFTPASNFGK 130
Query: 249 SLLPRVAALLDVSPISDIIDIKSPDTFQ 276
+ LPRVAALL+VS IS+I +K +TFQ
Sbjct: 131 NFLPRVAALLNVSQISEITKVKDAETFQ 158
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 5 FESTIIIGEHADGKLSASTLSAITAAQKIG-GDISVLVAGSKVADVSNAI 53
+ + ++I EH + +L STL+ ITAA K+G +ISVLVAGSK V++++
Sbjct: 26 YSTCLVIAEHDNNQLLNSTLNTITAASKLGVTNISVLVAGSKCGPVADSV 75
>sp|Q8J112|ETFA_CRYNV Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus neoformans var. grubii
GN=ETF1 PE=3 SV=1
Length = 346
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 99/158 (62%), Gaps = 28/158 (17%)
Query: 51 NAILTLKS--KDPVKVVTVRGTSFPPAA-KGGSASVEALANASVEANKLSEWVGQELSKS 107
NA+LT+KS KD VK+VTVR T+F AA GSA VE + ++E+ ++++ +EL+ S
Sbjct: 160 NAVLTVKSSPKDSVKIVTVRSTAFDKAAIADGSADVEDVEILAIESP--TQFISEELTVS 217
Query: 108 DRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGA 167
RPDL SA VVSGGR LKS ++F K+L LAD LGA
Sbjct: 218 SRPDLASAARVVSGGRALKSKESFD-----------------------KILDPLADSLGA 254
Query: 168 AVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
AVGASRAAVDAG+ N +Q+GQTGK++AP++ G++
Sbjct: 255 AVGASRAAVDAGYADNSLQVGQTGKVVAPELYVAVGIS 292
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 316 THILAGASSMGKSLLPRVAALLDVSPISDIIDIK-SPDTFVRTIY 359
+H+ A +++GK++ PR+A +LD S ++DII + S TF R IY
Sbjct: 113 SHVFAAHTAVGKNVFPRLAGMLDSSLVADIIALDPSRGTFTRPIY 157
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 237 THILAGASSMGKSLLPRVAALLDVSPISDIIDIK-SPDTFQVSKISGVTKVLTVEN 291
+H+ A +++GK++ PR+A +LD S ++DII + S TF +G VLTV++
Sbjct: 113 SHVFAAHTAVGKNVFPRLAGMLDSSLVADIIALDPSRGTFTRPIYAG-NAVLTVKS 167
Score = 35.0 bits (79), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 3 ARFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGS 44
+R S++++ EH G+L+ ++LSA+TAA+ G D ++ GS
Sbjct: 22 SRLASSLVLLEHKAGRLNDASLSAVTAAKATGNDTHGILVGS 63
>sp|P0CN60|ETFA_CRYNJ Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=ETF1 PE=3
SV=1
Length = 346
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 98/158 (62%), Gaps = 28/158 (17%)
Query: 51 NAILTLKS--KDPVKVVTVRGTSFPPAA-KGGSASVEALANASVEANKLSEWVGQELSKS 107
NA+LT+KS KD VKVVTVR T+F AA GSA+VE + +V+ +++V +EL+ S
Sbjct: 160 NAVLTIKSSPKDSVKVVTVRSTAFDKAAVANGSAAVEDVDIITVDTP--TQFVSEELTVS 217
Query: 108 DRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGA 167
RPDL SA VVSGGR LKS ++F +L LAD LGA
Sbjct: 218 SRPDLASAARVVSGGRALKSKESFD-----------------------TILDPLADSLGA 254
Query: 168 AVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
AVGASRAAVDAG+ N +Q+GQTGK++AP++ G++
Sbjct: 255 AVGASRAAVDAGYADNSLQVGQTGKVVAPELYVAIGIS 292
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 158 LYTLADKLGAAVGASRAAVDAG-FVPNDMQ---IGQTGKI--IAPQVSKISGVTKVLTVE 211
L L K G AS +AV A + ND +G +I + + +I ++K+
Sbjct: 28 LVFLEHKAGKLNEASLSAVTAAKTLGNDTHGLLVGTKSEIENVLDRTKEIKDLSKIYLAT 87
Query: 212 NDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKS 271
+D L E LA L+ S +A +HI A +++GK++ PR+A LLD S I+DII ++S
Sbjct: 88 SDTYSHSLAEPLASLLASIASAKDVSHIFAAHTAVGKNIFPRLAGLLDTSLIADIIALES 147
Query: 272 P-DTFQVSKISGVTKVLTVEN 291
DTF +G VLT+++
Sbjct: 148 SGDTFTRPIYAG-NAVLTIKS 167
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 3 ARFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSK 45
+R S+++ EH GKL+ ++LSA+TAA+ +G D L+ G+K
Sbjct: 22 SRLVSSLVFLEHKAGKLNEASLSAVTAAKTLGNDTHGLLVGTK 64
>sp|P0CN61|ETFA_CRYNB Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=ETF1 PE=3 SV=1
Length = 346
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 98/158 (62%), Gaps = 28/158 (17%)
Query: 51 NAILTLKS--KDPVKVVTVRGTSFPPAA-KGGSASVEALANASVEANKLSEWVGQELSKS 107
NA+LT+KS KD VKVVTVR T+F AA GSA+VE + +V+ +++V +EL+ S
Sbjct: 160 NAVLTIKSSPKDSVKVVTVRSTAFDKAAVANGSAAVEDVDIITVDTP--TQFVSEELTVS 217
Query: 108 DRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGA 167
RPDL SA VVSGGR LKS ++F +L LAD LGA
Sbjct: 218 SRPDLASAARVVSGGRALKSKESFD-----------------------TILDPLADSLGA 254
Query: 168 AVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
AVGASRAAVDAG+ N +Q+GQTGK++AP++ G++
Sbjct: 255 AVGASRAAVDAGYADNSLQVGQTGKVVAPELYVAIGIS 292
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 158 LYTLADKLGAAVGASRAAVDAG-FVPNDMQ---IGQTGKI--IAPQVSKISGVTKVLTVE 211
L L K G AS +AV A + ND +G +I + + +I ++K+
Sbjct: 28 LVFLEHKAGKLNEASLSAVTAAKTLGNDTHGLLVGTKSEIENVLDRTKEIKDLSKIYLAT 87
Query: 212 NDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKS 271
+D L E LA L+ S +A +HI A +++GK++ PR+A LLD S I+DII ++S
Sbjct: 88 SDTYSHSLAEPLASLLASIASAKDVSHIFAAHTAVGKNIFPRLAGLLDTSLIADIIALES 147
Query: 272 P-DTFQVSKISGVTKVLTVEN 291
DTF +G VLT+++
Sbjct: 148 SGDTFTRPIYAG-NAVLTIKS 167
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 3 ARFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSK 45
+R S+++ EH GKL+ ++LSA+TAA+ +G D L+ G+K
Sbjct: 22 SRLVSSLVFLEHKAGKLNEASLSAVTAAKTLGNDTHGLLVGTK 64
>sp|Q75LJ3|ETFA_ORYSJ Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Oryza sativa subsp. japonica GN=ETFA PE=3 SV=1
Length = 358
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 97/164 (59%), Gaps = 36/164 (21%)
Query: 51 NAILTLK--SKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSE-------WVG 101
NA+ T++ +DP ++++R TSF P A V + V+ + LSE WV
Sbjct: 169 NALCTVRYTGEDPC-MMSIRSTSFSPTEAMSEAKVAPITQ--VDLSFLSEGSSGKSAWVN 225
Query: 102 QELSKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTL 161
+ ++RPDL +A +VV+GGRGLK SA+NFK+L L
Sbjct: 226 LKSQDTERPDLANAPVVVTGGRGLK------------------------SAENFKVLEQL 261
Query: 162 ADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
A+KLGAAVGA+RAAVDAGFVPN++Q+GQTGKI+AP++ GV+
Sbjct: 262 AEKLGAAVGATRAAVDAGFVPNELQVGQTGKIVAPELYMAFGVS 305
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%)
Query: 283 VTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPI 342
V++VL ++D L E A L+ S Q+ G Y+H++A ++S GK+LLPR AALLDVSP+
Sbjct: 90 VSEVLVADSDVFAHPLAEPWAELLRSVQHKGGYSHVIASSTSFGKNLLPRAAALLDVSPV 149
Query: 343 SDIIDIKSPDTFVRTIY 359
+D+ I P FVR IY
Sbjct: 150 TDVTSISEPRVFVRPIY 166
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 204 VTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPI 263
V++VL ++D L E A L+ S Q+ G Y+H++A ++S GK+LLPR AALLDVSP+
Sbjct: 90 VSEVLVADSDVFAHPLAEPWAELLRSVQHKGGYSHVIASSTSFGKNLLPRAAALLDVSPV 149
Query: 264 SDIIDIKSPDTF 275
+D+ I P F
Sbjct: 150 TDVTSISEPRVF 161
>sp|A2XNR6|ETFA_ORYSI Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Oryza sativa subsp. indica GN=ETFA PE=3 SV=1
Length = 358
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 97/164 (59%), Gaps = 36/164 (21%)
Query: 51 NAILTLK--SKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSE-------WVG 101
NA+ T++ +DP ++++R TSF P A V + V+ + LSE WV
Sbjct: 169 NALCTVRYTGEDPC-MMSIRSTSFSPTEAMSEAKVAPITQ--VDLSFLSEGSSGKSAWVN 225
Query: 102 QELSKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTL 161
+ ++RPDL +A +VV+GGRGLK SA+NFK+L L
Sbjct: 226 LKSQDTERPDLANAPVVVTGGRGLK------------------------SAENFKVLEQL 261
Query: 162 ADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
A+KLGAAVGA+RAAVDAGFVPN++Q+GQTGKI+AP++ GV+
Sbjct: 262 AEKLGAAVGATRAAVDAGFVPNELQVGQTGKIVAPELYMAFGVS 305
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%)
Query: 283 VTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPI 342
V++VL ++D L E A L+ S Q+ G Y+H++A ++S GK+LLPR AALLDVSP+
Sbjct: 90 VSEVLVADSDVFAHPLAEPWAELLRSVQHKGGYSHVIASSTSFGKNLLPRAAALLDVSPV 149
Query: 343 SDIIDIKSPDTFVRTIY 359
+D+ I P FVR IY
Sbjct: 150 TDVTSISEPRVFVRPIY 166
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 204 VTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPI 263
V++VL ++D L E A L+ S Q+ G Y+H++A ++S GK+LLPR AALLDVSP+
Sbjct: 90 VSEVLVADSDVFAHPLAEPWAELLRSVQHKGGYSHVIASSTSFGKNLLPRAAALLDVSPV 149
Query: 264 SDIIDIKSPDTF 275
+D+ I P F
Sbjct: 150 TDVTSISEPRVF 161
>sp|Q5Y223|ETFA_CRYGW Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus gattii serotype B (strain
WM276 / ATCC MYA-4071) GN=ETF1 PE=3 SV=1
Length = 346
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 96/158 (60%), Gaps = 28/158 (17%)
Query: 51 NAILTLKS--KDPVKVVTVRGTSFPPA-AKGGSASVEALANASVEANKLSEWVGQELSKS 107
NA+LT+KS KD VK+VTVR T+F A GSA +E + +V+ +++V +EL+ S
Sbjct: 160 NAVLTIKSSPKDSVKIVTVRSTAFDKAPVAAGSAVIEDVDIITVDTP--TQFVSEELTVS 217
Query: 108 DRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGA 167
RPDL SA VVSGGR LKS ++F +L LAD LGA
Sbjct: 218 SRPDLASAARVVSGGRALKSKESFD-----------------------AILNPLADSLGA 254
Query: 168 AVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
AVGASRAAVDAG+ N +Q+GQTGK++AP++ G++
Sbjct: 255 AVGASRAAVDAGYADNSLQVGQTGKVVAPELYVAIGIS 292
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 23/160 (14%)
Query: 197 QVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAA 256
+ +I G++K+ +D+ L E LA L+ S +A +H+ A +++GK++ PR+A
Sbjct: 73 RAKEIKGLSKIYLARSDSYSHSLAEALASLLASIVSAKDVSHLFAAHTAVGKNVFPRLAG 132
Query: 257 LLDVSPISDIIDIKSP-DTFQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKY 315
LLD S I+DII ++S DTF +G VLT+++ P++ ++ A
Sbjct: 133 LLDSSLIADIIALESSGDTFTRPIYAG-NAVLTIKSS------PKDSVKIVTVRSTAFDK 185
Query: 316 THILAGASSMGKSLLPRVAALLDVSPISDIIDIKSPDTFV 355
+ AG+ A + DV DII + +P FV
Sbjct: 186 APVAAGS-----------AVIEDV----DIITVDTPTQFV 210
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 3 ARFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSNAI 53
+R S+++ EH GKLS ++LSA+TAA+ +G D L+ G+K +++ NA+
Sbjct: 22 SRLVSSLVFLEHKAGKLSEASLSAVTAAKTLGNDTHGLLVGTK-SEIENAL 71
>sp|Q9C6I6|ETFA_ARATH Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Arabidopsis thaliana GN=ETFA PE=1 SV=1
Length = 363
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 89/149 (59%), Gaps = 31/149 (20%)
Query: 64 VVTVRGTSFP-------PAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAK 116
++T+R TSFP +K + S L+N ++ S +VG+ ++RPDLGSA+
Sbjct: 186 MLTIRSTSFPVTPITANSESKKATVSQIDLSNFEDDSVSKSRYVGRSTQDTERPDLGSAR 245
Query: 117 IVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAV 176
+V++GGR LKS + NFK++ LA+KLG AVGA+RAAV
Sbjct: 246 VVITGGRALKSVE------------------------NFKMIEKLAEKLGGAVGATRAAV 281
Query: 177 DAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
DAG+VPND+Q+GQTGKI+AP++ GV+
Sbjct: 282 DAGYVPNDLQVGQTGKIVAPELYMAFGVS 310
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 283 VTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPI 342
V++VL ++D + L E A L+ + G Y+HILA +SS GK++LPRVAALLDVSPI
Sbjct: 93 VSEVLVADSDKFEYSLAEPWAKLVDFVRQQGDYSHILASSSSFGKNILPRVAALLDVSPI 152
Query: 343 SDIIDIKSPDTFVRTIY 359
+D++ I D F+R IY
Sbjct: 153 TDVVKILGSDQFIRPIY 169
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%)
Query: 204 VTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPI 263
V++VL ++D + L E A L+ + G Y+HILA +SS GK++LPRVAALLDVSPI
Sbjct: 93 VSEVLVADSDKFEYSLAEPWAKLVDFVRQQGDYSHILASSSSFGKNILPRVAALLDVSPI 152
Query: 264 SDIIDIKSPDTF 275
+D++ I D F
Sbjct: 153 TDVVKILGSDQF 164
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 4 RFESTIIIGEHADGKLSASTLSAITAAQKIG--GDISVLVAGS 44
R ST+I+ EH G + T+S + AA +G IS+L+AGS
Sbjct: 33 RCISTLILAEHESGTIKPQTVSTVVAANSLGESSSISLLLAGS 75
>sp|P78790|ETFA_SCHPO Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC27D7.06 PE=2 SV=3
Length = 341
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 25/149 (16%)
Query: 51 NAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRP 110
N +T+ +KDP+K+VTVR ++F A G + + + L EWV + + K+ RP
Sbjct: 161 NVNVTVSTKDPIKIVTVRASAFDAAPSSGEGAATVVEGIDPKPAALQEWVSENIIKNARP 220
Query: 111 DLGSAKIVVSGGRGLKSADNF-KLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAV 169
DL SA+ VV+GGR LK + F ++L LADK LGAA+
Sbjct: 221 DLSSAERVVAGGRPLKDKETFERILTPLADK------------------------LGAAI 256
Query: 170 GASRAAVDAGFVPNDMQIGQTGKIIAPQV 198
GA+R AVD+G+ N +QIGQTGKIIAP++
Sbjct: 257 GATRVAVDSGYADNSLQIGQTGKIIAPKL 285
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 273 DTFQVSK-----ISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGK 327
D+ Q+S+ ++ + KV+ VEN + + +P+ +A ++ + +H+ + S++GK
Sbjct: 67 DSSQISQKVAKSVNDLKKVIYVENPSYEHNIPDQIANVLFENVKKNEISHVFSAHSTVGK 126
Query: 328 SLLPRVAALLDVSPISDIIDIKSPDTFVRTIY 359
++PR+AA+ DV ISDII + S DTFVR Y
Sbjct: 127 GVMPRLAAMFDVMQISDIIGVVSADTFVRPTY 158
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 79/151 (52%), Gaps = 15/151 (9%)
Query: 155 FKLLYTLADKLGAAVGASRAAVDA---------GFVPNDMQIGQTGKIIAPQVSK-ISGV 204
F +L L + G AS +AV+A GFV IG+ I+ +V+K ++ +
Sbjct: 28 FSVLTLLEHQGGNLSPASLSAVEAAKRTGGDVFGFV-----IGKDSSQISQKVAKSVNDL 82
Query: 205 TKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPIS 264
KV+ VEN + + +P+ +A ++ + +H+ + S++GK ++PR+AA+ DV IS
Sbjct: 83 KKVIYVENPSYEHNIPDQIANVLFENVKKNEISHVFSAHSTVGKGVMPRLAAMFDVMQIS 142
Query: 265 DIIDIKSPDTFQVSKISGVTKVLTVENDALK 295
DII + S DTF +G V D +K
Sbjct: 143 DIIGVVSADTFVRPTYAGNVNVTVSTKDPIK 173
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 4 RFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSNAILTLKSKDPVK 63
+ S + + EH G LS ++LSA+ AA++ GGD+ V G + +S + D K
Sbjct: 26 HWFSVLTLLEHQGGNLSPASLSAVEAAKRTGGDVFGFVIGKDSSQISQKVAK-SVNDLKK 84
Query: 64 VVTVRGTSF 72
V+ V S+
Sbjct: 85 VIYVENPSY 93
>sp|Q12480|ETFA_YEAST Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=AIM45 PE=1 SV=1
Length = 344
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 85/156 (54%), Gaps = 24/156 (15%)
Query: 51 NAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLS-EWVGQELSKSDR 109
N I T++ + K++ +R ++FPP A+G SV + L+ WV L+KS+R
Sbjct: 159 NIISTIECQAEKKLLIIRASAFPPIAEGSMDSVTIEKRTDIPPCDLNVTWVKTILTKSER 218
Query: 110 PDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAV 169
P+L SA+ VV+GGR LK + F+ KLL LAD L AA+
Sbjct: 219 PELTSAQNVVTGGRALKDKETFE-----------------------KLLSPLADVLHAAI 255
Query: 170 GASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
GA+RA+VD G N +QIGQTGK++AP + GV+
Sbjct: 256 GATRASVDNGLCDNSLQIGQTGKVVAPNLYIAIGVS 291
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 281 SGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVS 340
S + K++ E+ L LPE L PL+V G Y+H + SS+GKS+LPRV ALLDV
Sbjct: 78 SNLEKLVIFEDSKLDTCLPEQLTPLLVKLLKGGDYSHFVVSNSSVGKSVLPRVGALLDVQ 137
Query: 341 PISDIIDIKSPDTFVRTIY 359
P+ ++ IK P TF+R IY
Sbjct: 138 PVCEVTVIKDPKTFIRPIY 156
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 202 SGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVS 261
S + K++ E+ L LPE L PL+V G Y+H + SS+GKS+LPRV ALLDV
Sbjct: 78 SNLEKLVIFEDSKLDTCLPEQLTPLLVKLLKGGDYSHFVVSNSSVGKSVLPRVGALLDVQ 137
Query: 262 PISDIIDIKSPDTFQVSKISGVTKVLTVENDALKGLL 298
P+ ++ IK P TF + I + T+E A K LL
Sbjct: 138 PVCEVTVIKDPKTF-IRPIYAGNIISTIECQAEKKLL 173
>sp|O53275|ETFA_MYCTU Electron transfer flavoprotein subunit alpha OS=Mycobacterium
tuberculosis GN=etfA PE=3 SV=1
Length = 318
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 94/195 (48%), Gaps = 32/195 (16%)
Query: 9 IIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSNAILTLKSK--DPVKVVT 66
++I ADGK A L+A + + + V G V + T++++ V+T
Sbjct: 90 VLIAATADGKEIAGRLAARIGSGLLVDVVDVREGGVGVHSIFGGAFTVEAQANGDTPVIT 149
Query: 67 VRGTSF---PPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAKIVVSGGR 123
VR + P A G SVE A A A + + DRP+L A IVV+GGR
Sbjct: 150 VRAGAVEAEPAAGAGEQVSVEVPAAAENAARITAR---EPAVAGDRPELTEATIVVAGGR 206
Query: 124 GLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPN 183
G+ SA+ NF ++ LAD LGAAVGASRAAVD+G+ P
Sbjct: 207 GVGSAE------------------------NFSVVEALADSLGAAVGASRAAVDSGYYPG 242
Query: 184 DMQIGQTGKIIAPQV 198
Q+GQTGK ++PQ+
Sbjct: 243 QFQVGQTGKTVSPQL 257
>sp|O33096|ETFA_MYCLE Electron transfer flavoprotein subunit alpha OS=Mycobacterium
leprae (strain TN) GN=etfA PE=3 SV=1
Length = 318
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%)
Query: 152 ADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQV 198
ADNF ++ LAD LGAAVGASRAAVD+G+ P QIGQTGK ++PQ+
Sbjct: 211 ADNFSVVEALADSLGAAVGASRAAVDSGYYPGQFQIGQTGKTVSPQL 257
>sp|P94551|ETFA_BACSU Electron transfer flavoprotein subunit alpha OS=Bacillus subtilis
(strain 168) GN=etfA PE=3 SV=1
Length = 325
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 41/209 (19%)
Query: 8 TIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVS-----NAILTLKSKDPV 62
++I G A GK + L+A I I V V G V A + S DP+
Sbjct: 91 SVIFGHTAMGKDLSPKLAARLQTGLISDAIDVSVTGGNVVFTRPIYSGKAFERVISTDPM 150
Query: 63 KVVTVRGTSFPPAAKGGSASVEALANASVEANKLS----EWVGQELSK--SDRPDLGSAK 116
T+R + + K S S S+E+ +S V QE+ K +D DL AK
Sbjct: 151 IFATIRPNNIQASEKDTSRS------GSIESIDVSLTDLRTVIQEVVKKTADGVDLSEAK 204
Query: 117 IVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAV 176
I+V+GGRG+KS + F+ L LA+ LGAAVGASR A
Sbjct: 205 IIVAGGRGVKSKEG------------------------FQPLQELAEVLGAAVGASRGAC 240
Query: 177 DAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
DA + +QIGQTGK++ P + G++
Sbjct: 241 DADYCDYALQIGQTGKVVTPDLYIACGIS 269
Score = 38.5 bits (88), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 282 GVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSP 341
G KVLT E+ LK + + ++ ++ G ++MGK L P++AA L
Sbjct: 56 GADKVLTAEDPKLKTYTADGYSQVMRGVIEQENPDSVIFGHTAMGKDLSPKLAARLQTGL 115
Query: 342 ISDIIDIKSPD---TFVRTIY 359
ISD ID+ F R IY
Sbjct: 116 ISDAIDVSVTGGNVVFTRPIY 136
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 187 IGQTGKIIAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSM 246
IG+ + IA ++ G KVLT E+ LK + + ++ ++ G ++M
Sbjct: 41 IGENVQSIAQELIHY-GADKVLTAEDPKLKTYTADGYSQVMRGVIEQENPDSVIFGHTAM 99
Query: 247 GKSLLPRVAALLDVSPISDIIDI 269
GK L P++AA L ISD ID+
Sbjct: 100 GKDLSPKLAARLQTGLISDAIDV 122
>sp|P53574|FIXB_AZOVI Protein FixB OS=Azotobacter vinelandii GN=fixB PE=3 SV=1
Length = 360
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 24/98 (24%)
Query: 108 DRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGA 167
D+P+L A I+V+GGRGL++ + NF+L++ LA LGA
Sbjct: 227 DKPNLPFADIIVAGGRGLRNQE------------------------NFQLVWDLAKVLGA 262
Query: 168 AVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
VGASR V AG+ D Q+GQ+GK + P++ +G++
Sbjct: 263 EVGASRPIVQAGWAELDRQVGQSGKTVRPKLYIAAGIS 300
>sp|P53578|FIXB_CLOSA Protein FixB OS=Clostridium saccharobutylicum GN=fixB PE=3 SV=1
Length = 334
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 24/101 (23%)
Query: 105 SKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADK 164
SK D D+ AKI+V+GGRG+ S +NF +LL LA
Sbjct: 202 SKKDIVDISEAKIIVAGGRGVGSKENF------------------------ELLGELAKV 237
Query: 165 LGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
LG V SRAAV+ G++ N Q+GQTGK + P + G++
Sbjct: 238 LGGTVAGSRAAVEKGWIENAYQVGQTGKTVKPSIYIACGIS 278
Score = 31.6 bits (70), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 202 SGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVS 261
G +VL +N L+ + +I N K + GA+ +G+ L PRVAA L+
Sbjct: 60 HGADEVLVADNKDLQHYTTDAYTKVICDLANERKPGILFVGATFIGRDLGPRVAARLNTG 119
Query: 262 PISDIIDI 269
+D I
Sbjct: 120 LTADCTSI 127
Score = 31.6 bits (70), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 281 SGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVS 340
G +VL +N L+ + +I N K + GA+ +G+ L PRVAA L+
Sbjct: 60 HGADEVLVADNKDLQHYTTDAYTKVICDLANERKPGILFVGATFIGRDLGPRVAARLNTG 119
Query: 341 PISDIIDI 348
+D I
Sbjct: 120 LTADCTSI 127
>sp|O85692|ETFA_MEGEL Electron transfer flavoprotein subunit alpha OS=Megasphaera
elsdenii GN=etfA PE=3 SV=1
Length = 338
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 54/93 (58%), Gaps = 14/93 (15%)
Query: 121 GGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFK--LLYTLADKLGAAVGASRAAVDA 178
GG G+K D AD + A GRG+ S + FK +L AD LG AVGASRAAVDA
Sbjct: 205 GGEGVKIED--------ADVI-VAGGRGMNSEEPFKTGILKECADVLGGAVGASRAAVDA 255
Query: 179 GFVPNDMQIGQTGKIIAPQV---SKISGVTKVL 208
G++ Q+GQTGK + P++ ISG + L
Sbjct: 256 GWIDALHQVGQTGKTVGPKIYIACAISGAIQPL 288
>sp|P52039|ETFA_CLOAB Electron transfer flavoprotein subunit alpha OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=etfA PE=3 SV=2
Length = 336
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 24/98 (24%)
Query: 108 DRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGA 167
D D+G AK++V+GGRG VG S +NF+ L LA LG
Sbjct: 209 DIADIGEAKVLVAGGRG--------------------VG----SKENFEKLEELASLLGG 244
Query: 168 AVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
+ ASRAA++ +V D+Q+GQTGK + P + G++
Sbjct: 245 TIAASRAAIEKEWVDKDLQVGQTGKTVRPTLYIACGIS 282
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 202 SGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVS 261
G KVL +N+ L + A +I N K + GA+ +G+ L PR+AA L
Sbjct: 61 HGADKVLAADNELLAHFSTDGYAKVICDLVNERKPEILFIGATFIGRDLGPRIAARLSTG 120
Query: 262 PISDI----IDIKSPD 273
+D ID+++ D
Sbjct: 121 LTADCTSLDIDVENRD 136
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 281 SGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVS 340
G KVL +N+ L + A +I N K + GA+ +G+ L PR+AA L
Sbjct: 61 HGADKVLAADNELLAHFSTDGYAKVICDLVNERKPEILFIGATFIGRDLGPRIAARLSTG 120
Query: 341 PISDI----IDIKSPD 352
+D ID+++ D
Sbjct: 121 LTADCTSLDIDVENRD 136
>sp|P10449|FIXB_BRAJA Protein FixB OS=Bradyrhizobium japonicum (strain USDA 110) GN=fixB
PE=3 SV=2
Length = 369
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 146 GRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
G GL S +NF+L+ LA LGA G SR V G+V +D QIGQTGK I P++ +G++
Sbjct: 247 GLGLGSPENFRLVRELAALLGAEYGCSRPLVQKGWVTSDRQIGQTGKTIRPKLYIAAGIS 306
>sp|P26483|FIXB_AZOC5 Protein FixB OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=fixB PE=3 SV=2
Length = 369
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 146 GRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
G GL S +NF+L+ LA LGA G SR V G+V +D QIGQTGK I P++ +G++
Sbjct: 247 GLGLGSPENFQLVRQLAGVLGAEYGCSRPLVQKGWVTSDRQIGQTGKTIRPKLYIAAGIS 306
>sp|P71153|ETFA_THETC Electron transfer flavoprotein subunit alpha
OS=Thermoanaerobacterium thermosaccharolyticum (strain
ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) GN=etfA PE=3
SV=2
Length = 330
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 155 FKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
F ++ LAD LG VGASRA VDAG++ +D Q+GQTGK + P++ G++
Sbjct: 227 FNIIKELADVLGGVVGASRATVDAGWITSDHQVGQTGKTVRPKLYIACGIS 277
>sp|Q53209|FIXB_RHISN Protein FixB OS=Rhizobium sp. (strain NGR234) GN=fixB PE=3 SV=1
Length = 369
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 146 GRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
G GL +A+N L+ LA +G G SR V G++P D QIGQTGK I P++ +G++
Sbjct: 247 GLGLSNAENLLLIKDLALTIGGDYGCSRPLVQKGWMPADRQIGQTGKTIRPKLYIAAGIS 306
>sp|P09819|FIXB_RHIME Protein FixB OS=Rhizobium meliloti (strain 1021) GN=fixB PE=3 SV=1
Length = 353
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 146 GRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
G GL + N +LL LA LG G SR V G++P D QIGQTG I P++ +G++
Sbjct: 231 GLGLGAVQNLQLLKDLARTLGGDFGCSRPLVQKGWMPFDRQIGQTGNTIRPKLYIAAGIS 290
>sp|P53571|ETFA_METME Electron transfer flavoprotein subunit alpha OS=Methylophilus
methylotrophus GN=etfA PE=1 SV=2
Length = 321
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 64 VVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAKIVVSGGR 123
V+T+R + F P GS V + SV+ S+S D + V GG
Sbjct: 153 VLTIRPSVFKPLEGAGSPVVSNVDAPSVQ------------SRSQNKDY----VEVGGGN 196
Query: 124 GLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPN 183
+ T D + ++GRG+ N + LAD+ GA + SR DAG++P
Sbjct: 197 DID--------ITTVDFI-MSIGRGIGEETNVEQFRELADEAGATLCCSRPIADAGWLPK 247
Query: 184 DMQIGQTGKII 194
Q+GQ+GK++
Sbjct: 248 SRQVGQSGKVV 258
>sp|P45114|Y1217_HAEIN Probable TonB-dependent receptor HI_1217 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1217
PE=1 SV=1
Length = 913
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 12/137 (8%)
Query: 240 LAGASSMGKSLLPR--------VAALLDVSPISDIIDIKSPDTFQVSKISGVTKVL---T 288
L A ++GK++ P+ VA L +++I+DI + TF + K + L
Sbjct: 404 LMAAHNIGKTIYPKGGFFAGWQVADKLITKNVANIVDINNSHTFLLPKEIDLKTTLGFNY 463
Query: 289 VENDALKGLLPENLAPLIVSA-QNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIID 347
N+ K PE L+ A + G Y+H G S KSLLP+ + +L S
Sbjct: 464 FTNEYSKNRFPEELSLFYNDASHDQGLYSHSKRGRYSGTKSLLPQRSVILQPSGKQKFKT 523
Query: 348 IKSPDTFVRTIYELEPS 364
+ + IY L S
Sbjct: 524 VYFDTALSKGIYHLNYS 540
>sp|Q46907|YGCQ_ECOLI Putative electron transfer flavoprotein subunit YgcQ OS=Escherichia
coli (strain K12) GN=ygcQ PE=3 SV=2
Length = 286
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 145 VGRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGV 204
VG+G ADN + + LA+KLGA VG SRA V G V + IG +G ++AP+V + G
Sbjct: 174 VGQG-GEADN-QEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGA 231
Query: 205 T 205
+
Sbjct: 232 S 232
>sp|B7NHE6|FIXB_ECO7I Protein FixB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 61 PVKVVTVRGTSF----PPAAKGG-SASVEALANASVEANKLSEWVGQELSKSDRPDLGSA 115
P V+T+ +F P A++ G + +VE LA A ++ +S+ DL A
Sbjct: 141 PYAVLTISSGTFDAAQPDASRTGETHTVEWLAPAVAITRTATQ-----ARQSNSVDLDKA 195
Query: 116 KIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
++VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 196 RLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWM 238
>sp|B7LWN3|FIXB_ESCF3 Protein FixB OS=Escherichia fergusonii (strain ATCC 35469 / DSM
13698 / CDC 0568-73) GN=fixB PE=3 SV=1
Length = 313
Score = 35.8 bits (81), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 61 PVKVVTVRGTSF----PPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAK 116
P V+T+ +F P A++ G A +V + + + +S+ DL A+
Sbjct: 141 PYAVLTISSGTFDAAQPDASRTGETHTVAWQAPAVAITRTAT----QARQSNSVDLDKAR 196
Query: 117 IVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
+VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 197 LVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWM 238
>sp|B7N7R7|FIXB_ECOLU Protein FixB OS=Escherichia coli O17:K52:H18 (strain UMN026 /
ExPEC) GN=fixB PE=3 SV=1
Length = 313
Score = 35.8 bits (81), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 61 PVKVVTVRGTSF----PPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAK 116
P V+T+ +F P A++ G +V + + + +S+ DL A+
Sbjct: 141 PYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTAT----QARQSNSVDLDKAR 196
Query: 117 IVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
+VVS GRG+ S DN L L +GA + A+N K +
Sbjct: 197 LVVSVGRGIGSKDNIALAEQLCKAIGAELACSRPVAENEKWM 238
>sp|P64095|FIXB_SALTY Protein FixB OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=fixB PE=3 SV=1
Length = 313
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 61 PVKVVTVRGTSF----PPAAKGGS-ASVEALANASVEANKLSEWVGQELSKSDRPDLGSA 115
P V+T+ +F P A++ G +V+ A A+ ++ +S+ DL A
Sbjct: 141 PFAVITLSSGTFDAQQPDASRSGEMHTVQWQAPATAVTRTATQ-----ARQSNSVDLDKA 195
Query: 116 KIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
++VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 196 RLVVSVGRGIGSKENISLAEALCQTIGAELACSRPVAENEKWM 238
>sp|P64096|FIXB_SALTI Protein FixB OS=Salmonella typhi GN=fixB PE=3 SV=1
Length = 313
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 61 PVKVVTVRGTSF----PPAAKGGS-ASVEALANASVEANKLSEWVGQELSKSDRPDLGSA 115
P V+T+ +F P A++ G +V+ A A+ ++ +S+ DL A
Sbjct: 141 PFAVITLSSGTFDAQQPDASRSGEMHTVQWQAPATAVTRTATQ-----ARQSNSVDLDKA 195
Query: 116 KIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
++VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 196 RLVVSVGRGIGSKENISLAEALCQTIGAELACSRPVAENEKWM 238
>sp|B5BL14|FIXB_SALPK Protein FixB OS=Salmonella paratyphi A (strain AKU_12601) GN=fixB
PE=3 SV=1
Length = 313
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 61 PVKVVTVRGTSF----PPAAKGGS-ASVEALANASVEANKLSEWVGQELSKSDRPDLGSA 115
P V+T+ +F P A++ G +V+ A A+ ++ +S+ DL A
Sbjct: 141 PFAVITLSSGTFDAQQPDASRSGEMHTVQWQAPATAVTRTATQ-----ARQSNSVDLDKA 195
Query: 116 KIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
++VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 196 RLVVSVGRGIGSKENISLAEALCQTIGAELACSRPVAENEKWM 238
>sp|Q5PIP0|FIXB_SALPA Protein FixB OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42)
GN=fixB PE=3 SV=1
Length = 313
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 61 PVKVVTVRGTSF----PPAAKGGS-ASVEALANASVEANKLSEWVGQELSKSDRPDLGSA 115
P V+T+ +F P A++ G +V+ A A+ ++ +S+ DL A
Sbjct: 141 PFAVITLSSGTFDAQQPDASRSGEMHTVQWQAPATAVTRTATQ-----ARQSNSVDLDKA 195
Query: 116 KIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
++VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 196 RLVVSVGRGIGSKENISLAEALCQTIGAELACSRPVAENEKWM 238
>sp|B5F757|FIXB_SALA4 Protein FixB OS=Salmonella agona (strain SL483) GN=fixB PE=3 SV=1
Length = 313
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 61 PVKVVTVRGTSF----PPAAKGGS-ASVEALANASVEANKLSEWVGQELSKSDRPDLGSA 115
P V+T+ +F P A++ G +V+ A A+ ++ +S+ DL A
Sbjct: 141 PFAVITLSSGTFDAQQPDASRSGEMHTVQWQAPATAVTRTATQ-----ARQSNSVDLDKA 195
Query: 116 KIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
++VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 196 RLVVSVGRGIGSKENISLAEALCQTIGAELACSRPVAENEKWM 238
>sp|Q1RGF6|FIXB_ECOUT Protein FixB OS=Escherichia coli (strain UTI89 / UPEC) GN=fixB PE=3
SV=1
Length = 313
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 61 PVKVVTVRGTSF----PPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAK 116
P V+T+ +F P A++ G +V + + + +S+ DL A+
Sbjct: 141 PYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTAT----QARQSNSVDLDKAR 196
Query: 117 IVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
+VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 197 LVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWM 238
>sp|A1A792|FIXB_ECOK1 Protein FixB OS=Escherichia coli O1:K1 / APEC GN=fixB PE=3 SV=1
Length = 313
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 61 PVKVVTVRGTSF----PPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAK 116
P V+T+ +F P A++ G +V + + + +S+ DL A+
Sbjct: 141 PYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTAT----QARQSNSVDLDKAR 196
Query: 117 IVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
+VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 197 LVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWM 238
>sp|B7MAG5|FIXB_ECO45 Protein FixB OS=Escherichia coli O45:K1 (strain S88 / ExPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 61 PVKVVTVRGTSF----PPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAK 116
P V+T+ +F P A++ G +V + + + +S+ DL A+
Sbjct: 141 PYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTAT----QARQSNSVDLDKAR 196
Query: 117 IVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
+VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 197 LVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWM 238
>sp|Q0TLU7|FIXB_ECOL5 Protein FixB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 61 PVKVVTVRGTSF----PPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAK 116
P V+T+ +F P A++ G +V + + + +S+ DL A+
Sbjct: 141 PYAVLTISSGTFDVAQPDASRTGETHTVEWQAPAVAITRTAT----QARQSNSVDLDKAR 196
Query: 117 IVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
+VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 197 LVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWM 238
>sp|P59674|FIXB_ECOL6 Protein FixB OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=fixB PE=3 SV=1
Length = 313
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 61 PVKVVTVRGTSF----PPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAK 116
P V+T+ +F P A++ G +V + + + +S+ DL A+
Sbjct: 141 PYAVLTISSGTFDVAQPDASRTGETHTVEWQAPAVAITRTAT----QARQSNSVDLDKAR 196
Query: 117 IVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
+VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 197 LVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWM 238
>sp|B7UI88|FIXB_ECO27 Protein FixB OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 61 PVKVVTVRGTSF----PPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAK 116
P V+T+ +F P A++ G +V + + + +S+ DL A+
Sbjct: 141 PYAVLTISSGTFDVAQPDASRTGETHTVEWQAPAVAITRTAT----QARQSNSVDLDKAR 196
Query: 117 IVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
+VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 197 LVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWM 238
>sp|B7MNP9|FIXB_ECO81 Protein FixB OS=Escherichia coli O81 (strain ED1a) GN=fixB PE=3
SV=1
Length = 313
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 61 PVKVVTVRGTSF----PPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAK 116
P V+T+ +F P A++ G +V + + + +S+ DL A+
Sbjct: 141 PYAVLTISSGTFDVAQPDASRTGETHTVEWQAPAVAITRTAT----QARQSNSVDLDKAR 196
Query: 117 IVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLL 158
+VVS GRG+ S +N L L +GA + A+N K +
Sbjct: 197 LVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWM 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,765,363
Number of Sequences: 539616
Number of extensions: 4923633
Number of successful extensions: 14663
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 14297
Number of HSP's gapped (non-prelim): 484
length of query: 368
length of database: 191,569,459
effective HSP length: 119
effective length of query: 249
effective length of database: 127,355,155
effective search space: 31711433595
effective search space used: 31711433595
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)