RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15582
(477 letters)
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid
3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId:
29760]}
Length = 450
Score = 143 bits (361), Expect = 1e-38
Identities = 65/456 (14%), Positives = 130/456 (28%), Gaps = 59/456 (12%)
Query: 32 VLIICPTPSYSHQVPFIAIGKELVRRGHTVTMIGTDPLKEPPVNYTDIDLSFSYKYFKPQ 91
V ++ P +H P +A+ + L + + D +
Sbjct: 4 VAVL-AFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNI---- 58
Query: 92 LQKGEVLPDAVDNQRRLTGYEFIVNIGRITIAYTEDQLKSQQMQQFFKYIDENHVKFDLI 151
K + D V GY F +T Q + E +
Sbjct: 59 --KSYDISDGVPE-----GYVFAGRPQEDIELFTRA-APESFRQGMVMAVAETGRPVSCL 110
Query: 152 IYEGLLHTAYL------------------------------GFLPKLGYTQSMTLMERMN 181
+ + + A + G +
Sbjct: 111 VADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFI 170
Query: 182 NLFMQLYSKFYIRSRLMKKQDEIMERYFGTRGLSGKQLEENKTLLFIS-TSWLLTYPRPV 240
++ + + + + R G + F L +
Sbjct: 171 PGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSK 230
Query: 241 FPNTILLGPIHLNNPKPLPQNLKDWIEGAKDGVIYFSLGTNMQSASLQEDKRKAIVDSFK 300
+ +GP +L P P+ N ++ K+ + + + + +
Sbjct: 231 LKTYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEAL 290
Query: 301 QFPRHRIIWKWEEDILPDLPS--------NVICRKWLPQHDILAHPKVKLFIMQGGLQSS 352
+ R IW + LP + W PQ ++LAH V F+ G S
Sbjct: 291 EASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSL 350
Query: 353 QEAIHFGVPMIGIPFFADQDTNVRKL-ESMDVARFLEYENITAETLVTLMKSILYNET-- 409
E++ GVP+I PFF DQ N R + + +++ +E T L++ IL E
Sbjct: 351 WESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGK 410
Query: 410 -VYRKSQVYSKLSNTQMM---SPKDTAVWWIEYVLK 441
+ + + ++ + S + + ++ V K
Sbjct: 411 KLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 446
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 401
Score = 134 bits (337), Expect = 2e-35
Identities = 56/387 (14%), Positives = 108/387 (27%), Gaps = 24/387 (6%)
Query: 34 IICPTPSYSHQVPFIAIGKELVRRGHTVTMIGTDPLKE--PPVNYTDIDLSFSYKYFKPQ 91
++ S P +A+ + G V M E V + + S + +
Sbjct: 4 LLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPIQR 63
Query: 92 LQKG------EVLPDAVDNQRRLTGYEFIVNIGRITIAYTEDQLKSQQMQQFFKYIDENH 145
+ +A+ Q +T + + + +
Sbjct: 64 AKPLTAEDVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYA 123
Query: 146 VKFDLIIYEGLLHTAYLGFLPKLGYTQSMTLMERMNNLFMQLYSKFYIRSRLMKKQDEIM 205
+ LG ER N Q Y
Sbjct: 124 FHCPSYVPSPYYPPPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGLLNS----------H 173
Query: 206 ERYFGTRGLSGKQLEENKTLLFISTSWLLTYPRPVFPNTILLGPIHLNNPKPLPQNLKDW 265
G + +++ +L +P + + G L + +PL L +
Sbjct: 174 RDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQPTDLDAVQTGAWILPDERPLSPELAAF 233
Query: 266 IEGAKDGVIYFSLGTNMQSASLQEDKRKAIVDSFKQFPRHRIIWKWEEDILPDLPSNVIC 325
++ +Y G+ A AI + R + W + +LPD ++
Sbjct: 234 LDAGPP-PVYLGFGSLGAPADAVRVAIDAIRAHGR---RVILSRGWADLVLPDDGADCFA 289
Query: 326 RKWLPQHDILAHPKVKLFIMQGGLQSSQEAIHFGVPMIGIPFFADQDTNVRKLESMDVAR 385
+ + V I GG ++ A G P I +P ADQ ++ + V
Sbjct: 290 IGEVNHQVLFGR--VAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGV 347
Query: 386 FLEYENITAETLVTLMKSILYNETVYR 412
+ T ++L + + L ET R
Sbjct: 348 AHDGPIPTFDSLSAALATALTPETHAR 374
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 401
Score = 134 bits (336), Expect = 2e-35
Identities = 54/389 (13%), Positives = 109/389 (28%), Gaps = 27/389 (6%)
Query: 34 IICPTPSYSHQVPFIAIGKELVRRGHTVTMIGTDPLKE----PPVNYTDIDLSFSYKYFK 89
++ + +A+ L G M +E V + + L +
Sbjct: 4 LLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQHMMLQE 63
Query: 90 PQLQKGEVLPDAVDNQRRLTGYEFIVNIGR-----ITIAYTEDQLKSQQMQQFFKYIDEN 144
+ ++ + + + + + +
Sbjct: 64 GMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFY 123
Query: 145 HVKFDLIIYEGLLHTAYLGFLPKLGYTQSMTLMERMNNLFMQLYSKFYIRSRLMKKQDEI 204
V + + L AY G T L E F Y R R
Sbjct: 124 SVPSPVYLASPHLPPAYDEPTT-PGVTDIRVLWEERAARFADRYGPTLNRRR-------- 174
Query: 205 MERYFGTRGLSGKQLEENKTLLFISTSWLLTYPRPVFPNTILLGPIHLNNPKPLPQNLKD 264
G + + ++ +L P + + G L++ +PLP L+
Sbjct: 175 --AEIGLPPVEDVFGYGHGERPLLAADPVL-APLQPDVDAVQTGAWLLSDERPLPPELEA 231
Query: 265 WIEGAKDGVIYFSLGTNMQSASLQEDKRKAIVDSFKQFPRHRIIWKWEEDILPDLPSNVI 324
++ A ++ G++ K + R + W E +LPD +
Sbjct: 232 FLA-AGSPPVHIGFGSSSGRGIADAAKVAVEAIRAQG-RRVILSRGWTELVLPDDRDDCF 289
Query: 325 CRKWLPQHDILAHPKVKLFIMQGGLQSSQEAIHFGVPMIGIPFFADQDTNVRKLESMDVA 384
+ + V I G + A GVP + IP DQ ++ ++ +
Sbjct: 290 AIDEVNFQALFRR--VAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIG 347
Query: 385 RFLEYENITAETLVTLMKSILYNETVYRK 413
+ T E+L + ++L E R
Sbjct: 348 VAHDGPTPTFESLSAALTTVLAPE--TRA 374
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 391
Score = 130 bits (326), Expect = 4e-34
Identities = 54/391 (13%), Positives = 119/391 (30%), Gaps = 49/391 (12%)
Query: 33 LIICPTPSYSHQVPFIAIGKELVRRGHTVTMIGTDPLKE--PPVNYTDIDLSFSYKYFKP 90
++I S P +A+ L G M E V + +
Sbjct: 3 VLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPV--------- 53
Query: 91 QLQKGEVLPDAVDNQRRLTGYEFIVNIGRITIAYTEDQLKSQQMQQFFKYIDENHVKFDL 150
G + L ++ ++ + ++F + D
Sbjct: 54 ----GRAVRAGAREPGELPPGAA--------------EVVTEVVAEWFDKVPAAIEGCDA 95
Query: 151 IIYEGLLHTAY--------LGFLPKLGYTQSMTLMERMNNLFMQLYSKFYIRSRLMKKQD 202
++ GLL A LG + L + +Y++ RL
Sbjct: 96 VVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGA--DRLFGDAV 153
Query: 203 EIMERYFGTRGLSGKQLEENKTLLFISTSWLLTYPRPVFPNTILLGPIHLNNPKPLPQNL 262
G + +++ +L+ RP T+ G L + +PL L
Sbjct: 154 NSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDERPLSAEL 213
Query: 263 KDWIEGAKDGVIYFSLGTNMQSASLQEDKRKAIVDSFKQFPRHRIIWK-WEEDILPDLPS 321
+ ++ V ++ + D K + + + R ++ + W + +LPD +
Sbjct: 214 EAFLAAGSTPVYVGFGSSSRPA---TADAAKMAIKAVRASGRRIVLSRGWADLVLPDDGA 270
Query: 322 NVICRKWLPQHDILAHPKVKLFIMQGGLQSSQEAIHFGVPMIGIPFFAD----QDTNVRK 377
+ + ++ V I ++ A+ G+P I + D Q + +
Sbjct: 271 DCFVVGEVNLQELFGR--VAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADR 328
Query: 378 LESMDVARFLEYENITAETLVTLMKSILYNE 408
+ + V ++ T ++L + + L E
Sbjct: 329 VAELGVGVAVDGPVPTIDSLSAALDTALAPE 359
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase
UGT71G1 {Medicago truncatula [TaxId: 3880]}
Length = 461
Score = 124 bits (311), Expect = 1e-31
Identities = 63/424 (14%), Positives = 125/424 (29%), Gaps = 47/424 (11%)
Query: 33 LIICPTPSYSHQVPFIAIGKELVRRGH--TVTMIGTDPLKEPPVNYTDIDLSFSYKYFKP 90
LI P P H + K L +T+ P + + S +
Sbjct: 10 LIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQL 69
Query: 91 QLQKGEVLPDAVDNQRRLTGYEFIVNIGRITIAYTEDQLKSQQMQQFFKYIDENHVKFDL 150
+ EV P + + +I+ I + + +K+ + + + +
Sbjct: 70 -IDLPEVEPPPQELLKSPE--FYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMI 126
Query: 151 IIYEGLLHTAYLGF------------LPKLGYTQSMTLMERMN--------------NLF 184
+ +YL L + +R + N+
Sbjct: 127 DVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQVPSNVL 186
Query: 185 MQLYSKFYIRSRLMKKQDEIMERYFGTRGLSGKQLEENKTLLFISTSWLLTYPRPVFPNT 244
K E G + LE++ + V P
Sbjct: 187 PDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLL 246
Query: 245 ILLGPIHLNNPKPLPQNLKDWIEGAKDGVIYFSLGTNMQSASLQEDKRKAIVDSFKQFPR 304
L G + + + W++ D + F S + + I K
Sbjct: 247 DLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFL-CFGSMGVSFGPSQIREIALGLKHSGV 305
Query: 305 HRIIWKWEE-DILPD-------LPSNVICRKWLPQHDILAHPKVKLFIMQGGLQSSQEAI 356
+ E + P+ L + W PQ ++LAH + F+ G S E++
Sbjct: 306 RFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESM 365
Query: 357 HFGVPMIGIPFFADQDTNVRKLE-------SMDVARFLEYENITAETLVTLMKSILYNET 409
FGVP++ P +A+Q N +L + V + + AE + +K ++ ++
Sbjct: 366 WFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS 425
Query: 410 VYRK 413
+ K
Sbjct: 426 IVHK 429
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase
{Medicago truncatula [TaxId: 3880]}
Length = 473
Score = 122 bits (307), Expect = 4e-31
Identities = 67/432 (15%), Positives = 127/432 (29%), Gaps = 57/432 (13%)
Query: 32 VLIICPTPSYSHQVPFIAIGKELVRRGHTVTMIGTDP-----LKEPPVNYTDIDLSFSYK 86
V++I P P H P + K L RG +T + T+ LK D F+++
Sbjct: 4 VVMI-PYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFE 62
Query: 87 YFKPQLQKGEVLPDAVDNQRRL-----------------------------------TGY 111
L E D + L
Sbjct: 63 SIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMS 122
Query: 112 EFIVNIGRITIAYTEDQLKSQQMQQFFKYIDENHVKFDLIIYEGLLHTAYLGFLPKLGYT 171
I + S + + + + T
Sbjct: 123 FTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIP 182
Query: 172 QSMTLMERMNNLFMQLYSKFYIRSRLMKKQDEIMERYFGTRGLSGKQLEENKTLLFISTS 231
+ F++ + I + + + + + +LE + ST
Sbjct: 183 GLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTI 242
Query: 232 WLLTYPRPVF------PNTILLGPIHLNNPKPLPQNLKDWIEGAKDGVIYFSLGTNMQSA 285
+ P+ P L + N K + L V+Y + G+
Sbjct: 243 PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMT 302
Query: 286 SLQ--------EDKRKAIVDSFKQFPRHRIIWKWEEDILPDLPSNVICRKWLPQHDILAH 337
Q + +K+ + + + + ++ + W PQ +L H
Sbjct: 303 PEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNH 362
Query: 338 PKVKLFIMQGGLQSSQEAIHFGVPMIGIPFFADQDTNVRKL-ESMDVARFLEYENITAET 396
P + F+ G S+ E+I GVPM+ PFFADQ T+ R + ++ ++ N+ E
Sbjct: 363 PSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREE 421
Query: 397 LVTLMKSILYNE 408
L L+ ++ +
Sbjct: 422 LAKLINEVIAGD 433
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 471
Score = 115 bits (287), Expect = 2e-28
Identities = 69/425 (16%), Positives = 129/425 (30%), Gaps = 51/425 (12%)
Query: 32 VLIICPTPSYSHQVPFIAIGKELV-RRGHTVTMIGTDPLKEPPVNYTDID---LSFSYKY 87
V II P+P H +P + K LV G TVT + T +D S S +
Sbjct: 4 VAII-PSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVF 62
Query: 88 FKPQLQKGEVLPDAVDNQRRLTGYEFIVNIGRITIAYTEDQLKSQQMQQFFKYIDENHVK 147
P ++++ LT + ++ ++ E + D V
Sbjct: 63 LPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVA 122
Query: 148 FDLIIYEGLLHTAYLGFL---------------PKLGYTQSMTLMERMNNLFMQLYSKFY 192
+ + + + L T+ + L +
Sbjct: 123 VEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVAGKDFLDPAQ 182
Query: 193 IRSRLM-KKQDEIMERYFGTRGLSGKQLEENKTLLFISTSWLLTYPRPVFPNTILLGPIH 251
R K +RY G+ E + + PV+P L+
Sbjct: 183 DRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLVNIGK 242
Query: 252 LNNPKPLPQNLKDWIEGAKDGVIYFSLGTNMQSASLQEDKRKAIVDSFKQFPRHRIIW-- 309
+ W++ G + + + +L ++ + + +
Sbjct: 243 QEAKQTEESECLKWLDNQPLGSVLYVSFGSG--GTLTCEQLNELALGLADSEQRFLWVIR 300
Query: 310 -------------KWEEDILPDLPS---------NVICRKWLPQHDILAHPKVKLFIMQG 347
+ D L LP + W PQ +LAHP F+
Sbjct: 301 SPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHC 360
Query: 348 GLQSSQEAIHFGVPMIGIPFFADQDTNVRKL-ESMDVA---RFLEYENITAETLVTLMKS 403
G S+ E++ G+P+I P +A+Q N L E + A R + + E + ++K
Sbjct: 361 GWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKG 420
Query: 404 ILYNE 408
++ E
Sbjct: 421 LMEGE 425
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis
glycosyltransferase MurG {Escherichia coli [TaxId:
562]}
Length = 351
Score = 29.7 bits (65), Expect = 0.78
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 43 HQVPFIAIGKELVRRGHTVTMIGTD 67
H P +A+ L+ +G V +GT
Sbjct: 13 HVFPGLAVAHHLMAQGWQVRWLGTA 37
>d1ppjc2 f.21.1.2 (C:15-260) Mitochondrial cytochrome b subunit,
N-terminal domain {Cow (Bos taurus) [TaxId: 9913]}
Length = 246
Score = 27.8 bits (62), Expect = 2.4
Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 445 NVDHLKYNLDQIPWYQYYLV-DLAGIFIAGIFLV 477
N + ++D+IP++ YY + D+ G + + L+
Sbjct: 193 NPTGISSDVDKIPFHPYYTIKDILGALLLILALM 226
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis
protein RfaG {Escherichia coli [TaxId: 562]}
Length = 370
Score = 28.0 bits (60), Expect = 3.1
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 47 FIAIGKELVRRGHTVTMIGTDPLKEPPVNYTDIDL 81
F+ I + RGH V + + P + I +
Sbjct: 19 FMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQV 53
>d2g9hd2 d.15.6.1 (D:87-216) Enterotoxin type I {Staphylococcus
aureus [TaxId: 1280]}
Length = 130
Score = 26.0 bits (57), Expect = 6.7
Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 251 HLNNPKPLPQNLKDWIEGAKDGVIYFSLGTNMQSASLQE---DKRKAIVDSFK 300
+LN+ + +P NL W+ G + + TN + + QE R+ + + +
Sbjct: 2 YLNSARKIPINL--WVNGKHKTISTDKISTNKKLVTAQEIDVKLRRYLQEEYN 52
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.139 0.418
Gapped
Lambda K H
0.267 0.0659 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,814,588
Number of extensions: 87266
Number of successful extensions: 238
Number of sequences better than 10.0: 1
Number of HSP's gapped: 231
Number of HSP's successfully gapped: 17
Length of query: 477
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 388
Effective length of database: 1,185,626
Effective search space: 460022888
Effective search space used: 460022888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.1 bits)