Query psy15594
Match_columns 200
No_of_seqs 145 out of 197
Neff 4.3
Searched_HMMs 29240
Date Fri Aug 16 16:35:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15594.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15594hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l6x_A Catenin delta-1; cateni 99.7 1E-16 3.5E-21 152.4 8.4 122 1-174 397-518 (584)
2 3tt9_A Plakophilin-2; cell adh 99.7 3.3E-17 1.1E-21 139.6 4.3 68 32-99 165-232 (233)
3 3l6x_A Catenin delta-1; cateni 99.0 1.5E-10 5.2E-15 110.1 4.0 71 32-102 206-276 (584)
4 1xm9_A Plakophilin 1; armadill 98.1 1.1E-06 3.6E-11 78.9 2.9 85 1-122 373-457 (457)
5 1xm9_A Plakophilin 1; armadill 98.1 2.7E-06 9.3E-11 76.2 5.1 69 32-101 157-225 (457)
6 3nmw_A APC variant protein; AR 93.2 0.14 4.8E-06 45.1 6.2 80 33-115 233-335 (354)
7 3nmz_A APC variant protein; pr 92.1 0.22 7.6E-06 45.6 6.1 80 33-115 349-451 (458)
8 4db6_A Armadillo repeat protei 90.7 1.6 5.4E-05 33.2 8.8 93 32-127 68-181 (210)
9 3tt9_A Plakophilin-2; cell adh 86.6 1.6 5.5E-05 36.6 6.7 91 34-126 26-136 (233)
10 2z6h_A Catenin beta-1, beta-ca 86.3 2.4 8.3E-05 38.8 8.3 90 33-127 368-499 (644)
11 2z6h_A Catenin beta-1, beta-ca 85.6 3.3 0.00011 37.9 8.8 93 32-127 277-395 (644)
12 4db6_A Armadillo repeat protei 85.5 3.3 0.00011 31.4 7.5 78 33-113 111-208 (210)
13 4hxt_A De novo protein OR329; 84.9 5.8 0.0002 30.3 8.7 93 32-127 100-213 (252)
14 4db8_A Armadillo-repeat protei 83.3 1.9 6.6E-05 33.6 5.4 80 33-115 153-252 (252)
15 2z6g_A B-catenin; FULL-length, 82.9 5.4 0.00018 38.1 9.3 91 33-128 504-636 (780)
16 1jdh_A Beta-catenin; beta-cate 81.3 6.2 0.00021 34.0 8.3 93 32-127 280-398 (529)
17 3nmw_A APC variant protein; AR 80.8 9.8 0.00033 33.2 9.6 89 32-122 98-209 (354)
18 1xqr_A HSPBP1 protein; armadil 80.2 7 0.00024 33.3 8.2 94 34-130 98-213 (296)
19 4hxt_A De novo protein OR329; 79.6 6.8 0.00023 29.9 7.3 80 32-115 142-242 (252)
20 1jdh_A Beta-catenin; beta-cate 78.2 3.4 0.00012 35.6 5.7 92 33-127 116-228 (529)
21 2z6g_A B-catenin; FULL-length, 76.8 11 0.00037 36.0 9.2 93 32-127 413-531 (780)
22 3nmz_A APC variant protein; pr 75.8 15 0.0005 33.5 9.5 89 32-122 214-325 (458)
23 4db8_A Armadillo-repeat protei 74.4 21 0.00073 27.5 8.9 92 33-127 69-181 (252)
24 3tpo_A Importin subunit alpha- 64.9 30 0.001 30.8 8.8 93 33-128 308-422 (529)
25 3ul1_B Importin subunit alpha- 64.4 28 0.00094 31.0 8.5 93 33-128 289-403 (510)
26 4gmo_A Putative uncharacterize 61.4 21 0.00073 33.5 7.5 95 32-126 90-227 (684)
27 3ul1_B Importin subunit alpha- 60.1 19 0.00064 32.1 6.6 70 33-127 116-186 (510)
28 3tpo_A Importin subunit alpha- 52.7 80 0.0027 28.0 9.4 79 33-114 350-449 (529)
29 4b8j_A Importin subunit alpha- 46.6 85 0.0029 27.3 8.5 92 33-127 301-415 (528)
30 4b8j_A Importin subunit alpha- 46.4 60 0.002 28.2 7.5 80 33-114 259-358 (528)
31 3now_A UNC-45 protein, SD10334 37.2 1.1E+02 0.0038 30.1 8.5 90 34-127 639-751 (810)
32 3now_A UNC-45 protein, SD10334 34.3 79 0.0027 31.2 6.8 88 33-120 680-788 (810)
33 2jdq_A Importin alpha-1 subuni 27.4 2.1E+02 0.0073 23.5 7.6 79 33-114 207-305 (450)
34 2jdq_A Importin alpha-1 subuni 27.3 2.3E+02 0.0079 23.3 7.8 80 33-115 249-348 (450)
35 1wa5_B Importin alpha subunit; 27.0 2.3E+02 0.008 24.6 8.1 79 34-115 315-413 (530)
36 1tr8_A Conserved protein (MTH1 26.9 42 0.0014 25.1 2.7 37 18-68 63-100 (102)
37 1xqr_A HSPBP1 protein; armadil 26.9 1.7E+02 0.0058 24.6 7.0 80 33-115 140-239 (296)
38 2dc3_A Cytoglobin; myoglobin, 26.6 2.3E+02 0.0079 22.2 7.4 33 5-37 4-40 (193)
39 1wa5_B Importin alpha subunit; 24.0 2.2E+02 0.0077 24.7 7.4 80 33-116 146-246 (530)
No 1
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.66 E-value=1e-16 Score=152.40 Aligned_cols=122 Identities=35% Similarity=0.581 Sum_probs=81.8
Q ss_pred ChhhhhcCCCCCCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhccccccHHHHHHhhhhhhHHHHHHHHHHHHHHhhccC
Q psy15594 1 MRDLVQKLPSGNAQHDQGTSDDTIAAVLATLNEVIKKNAEFSRNASSAGEYARKKLRECEGLIDSLLYVVKSAIEKSLLE 80 (200)
Q Consensus 1 ~~dLv~kLp~~~~~~~~~lsd~ti~~vl~~l~evf~natg~lRNlSsa~~~aRq~mR~c~gLIdSl~~~i~~~v~~~~~d 80 (200)
++.||+.|+.++.++....+++++..+|.++.++........+ ...+
T Consensus 397 ip~LV~LL~~~~~~~~~~~s~~v~~~a~~tL~NL~a~~~~~~~---------------------------------~I~~ 443 (584)
T 3l6x_A 397 IPNLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAK---------------------------------KLRE 443 (584)
T ss_dssp HHHHHHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTTCHHHHH---------------------------------HHHH
T ss_pred HHHHHHHhcCCcccccccchHHHHHHHHHHHHHHhcCCHHHHH---------------------------------HHHH
Confidence 4678999998765444456788888888877766654444443 4577
Q ss_pred CcchhhhHhhhcCCCCcchHHHHHHHHHHHHhhchhHhHHHHHHcCCccccccchhhhhhccCCCCCCCCCCCCCCCccc
Q psy15594 81 SGGVERLMNITKQRQKYTPRVLKFAGQVLFTMWQHQELREVYKKHGWKEQDFVTKTVAARNAGPNSPNNANSTLNRPMAS 160 (200)
Q Consensus 81 ~kgvEN~VcIlrnlS~~~~k~~kAAs~lL~smW~~keL~~~yKK~G~kK~~F~~~t~~a~~~~~~~~~~~~~~l~~p~~s 160 (200)
.++|+.+|.++++.+ +.+++.|+|+.+|++||+|+|||+.|||+||+|+||++.+ ++|+.+
T Consensus 444 ~g~I~~Lv~LL~s~~-~~~~v~k~Aa~vL~nl~~~~elr~~~kk~G~~~~~f~~~~------------------~~~~~~ 504 (584)
T 3l6x_A 444 TQGIEKLVLINKSGN-RSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDFQVNL------------------NNASRS 504 (584)
T ss_dssp TTHHHHHHHHHTCSS-SCHHHHHHHHHHHHHHHTSHHHHHHHHTTTCCGGGGCCC-------------------------
T ss_pred CCChHHHHHHHhCCC-CChHHHHHHHHHHHHHHcCHHHHHHHHHcCCCHHHhcccc------------------CCCCCC
Confidence 889999999999743 6789999999999999999999999999999999998621 356677
Q ss_pred CCCcccccccccCC
Q psy15594 161 QGGTRYEDRTIQRP 174 (200)
Q Consensus 161 ~~~~~y~~~t~~~~ 174 (200)
+|+..|+|.|+|..
T Consensus 505 ~~~~~~~~~~~~~~ 518 (584)
T 3l6x_A 505 QSSHSYDDSTLPLI 518 (584)
T ss_dssp --------------
T ss_pred CCCCCCCccccchh
Confidence 78888888888775
No 2
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.66 E-value=3.3e-17 Score=139.63 Aligned_cols=68 Identities=29% Similarity=0.377 Sum_probs=65.2
Q ss_pred HHHHhhhhhhhhccccccHHHHHHhhhhhhHHHHHHHHHHHHHHhhccCCcchhhhHhhhcCCCCcch
Q psy15594 32 NEVIKKNAEFSRNASSAGEYARKKLRECEGLIDSLLYVVKSAIEKSLLESGGVERLMNITKQRQKYTP 99 (200)
Q Consensus 32 ~evf~natg~lRNlSsa~~~aRq~mR~c~gLIdSl~~~i~~~v~~~~~d~kgvEN~VcIlrnlS~~~~ 99 (200)
.+||.|++||+||||++++++|+.||+|.|||++|++|++.+++++++|+|++|||||++|||||+.+
T Consensus 165 ~~v~~na~~~L~nLss~~~~~R~~~r~~~Gli~~Lv~~l~~~~~~~~~~~k~~En~v~~L~nLs~~~~ 232 (233)
T 3tt9_A 165 FDIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCILHNLSYQLE 232 (233)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHCCCcHHHHHHHHHhhhhcccchhHHHHHHHHHHHHHHhhhc
Confidence 47899999999999999999999999999999999999999999999999999999999999999753
No 3
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.00 E-value=1.5e-10 Score=110.09 Aligned_cols=71 Identities=32% Similarity=0.490 Sum_probs=66.6
Q ss_pred HHHHhhhhhhhhccccccHHHHHHhhhhhhHHHHHHHHHHHHHHhhccCCcchhhhHhhhcCCCCcchHHH
Q psy15594 32 NEVIKKNAEFSRNASSAGEYARKKLRECEGLIDSLLYVVKSAIEKSLLESGGVERLMNITKQRQKYTPRVL 102 (200)
Q Consensus 32 ~evf~natg~lRNlSsa~~~aRq~mR~c~gLIdSl~~~i~~~v~~~~~d~kgvEN~VcIlrnlS~~~~k~~ 102 (200)
.+||.|+++|+||||+.++..|+.|++|.|+|++||++++.++++...+++.+|||||++||++|...++.
T Consensus 206 ~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~~~~enav~aL~NLs~~~~~e~ 276 (584)
T 3l6x_A 206 ESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREI 276 (584)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHTTHHHHS
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHHhhcccCccHHHHHHHHHHHHHhhccccccc
Confidence 47899999999999999999999999999999999999999999999999999999999999998766554
No 4
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=98.10 E-value=1.1e-06 Score=78.91 Aligned_cols=85 Identities=18% Similarity=0.397 Sum_probs=64.9
Q ss_pred ChhhhhcCCCCCCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhccccccHHHHHHhhhhhhHHHHHHHHHHHHHHhhccC
Q psy15594 1 MRDLVQKLPSGNAQHDQGTSDDTIAAVLATLNEVIKKNAEFSRNASSAGEYARKKLRECEGLIDSLLYVVKSAIEKSLLE 80 (200)
Q Consensus 1 ~~dLv~kLp~~~~~~~~~lsd~ti~~vl~~l~evf~natg~lRNlSsa~~~aRq~mR~c~gLIdSl~~~i~~~v~~~~~d 80 (200)
|+.||+.|.++..+ ...+++++..+|.++.+++.......+ ...+
T Consensus 373 i~~Lv~lL~~~~~~--~~~~~~v~~~~l~~l~ni~~~~~~~~~---------------------------------~i~~ 417 (457)
T 1xm9_A 373 FPEVTRLLTSHTGN--TSNSEDILSSACYTVRNLMASQPQLAK---------------------------------QYFS 417 (457)
T ss_dssp HHHHHHTTTSCCSC--STTHHHHHHHHHHHHHHHHTTCTHHHH---------------------------------HHCC
T ss_pred hHHHHHhccCCCCC--CCCcHHHHHHHHHHHHHHHhcCHHHHH---------------------------------HHHH
Confidence 35688888876543 234667777888888777765544333 4578
Q ss_pred CcchhhhHhhhcCCCCcchHHHHHHHHHHHHhhchhHhHHHH
Q psy15594 81 SGGVERLMNITKQRQKYTPRVLKFAGQVLFTMWQHQELREVY 122 (200)
Q Consensus 81 ~kgvEN~VcIlrnlS~~~~k~~kAAs~lL~smW~~keL~~~y 122 (200)
.++++.++.++++. +.+++.|.|+.+|++||+|+|||++|
T Consensus 418 ~g~l~~L~~L~~~~--~~~~i~~~A~~~L~~~~~~~~l~~~~ 457 (457)
T 1xm9_A 418 SSMLNNIINLCRSS--ASPKAAEAARLLLSDMWSSKELQGVL 457 (457)
T ss_dssp HHHHHHHHHHHHCT--TCHHHHHHHHHHHHTTSSSTTCSSCC
T ss_pred cCCHHHHHHHHcCC--CcHHHHHHHHHHHHHHHcchhhhccC
Confidence 88999999999873 56899999999999999999999753
No 5
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=98.08 E-value=2.7e-06 Score=76.25 Aligned_cols=69 Identities=29% Similarity=0.324 Sum_probs=62.7
Q ss_pred HHHHhhhhhhhhccccccHHHHHHhhhhhhHHHHHHHHHHHHHHhhccCCcchhhhHhhhcCCCCcchHH
Q psy15594 32 NEVIKKNAEFSRNASSAGEYARKKLRECEGLIDSLLYVVKSAIEKSLLESGGVERLMNITKQRQKYTPRV 101 (200)
Q Consensus 32 ~evf~natg~lRNlSsa~~~aRq~mR~c~gLIdSl~~~i~~~v~~~~~d~kgvEN~VcIlrnlS~~~~k~ 101 (200)
.++++++.++++|+|+. +..|+.|++++|+|..|+..+++.+..+..+++.+|+++|+++|++|..+.+
T Consensus 157 ~~v~~~a~~aL~nLs~~-~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs~~~~~~ 225 (457)
T 1xm9_A 157 PEVFFNATGCLRNLSSA-DAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAE 225 (457)
T ss_dssp HHHHHHHHHHHHHHTTS-HHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHH
T ss_pred HHHHHHHHHHHHHHccC-HHHHHHHHHcCCCHHHHHHHHHhhccccCCchHHHHHHHHHHHhcccchhcc
Confidence 45778999999999998 7899999999999999999999998888899999999999999999876544
No 6
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=93.24 E-value=0.14 Score=45.07 Aligned_cols=80 Identities=21% Similarity=0.248 Sum_probs=52.3
Q ss_pred HHHhhhhhhhhcccc---ccHHHHHHhhhhhhH--------------HHHHHHHHHHHHH------hhccCCcchhhhHh
Q psy15594 33 EVIKKNAEFSRNASS---AGEYARKKLRECEGL--------------IDSLLYVVKSAIE------KSLLESGGVERLMN 89 (200)
Q Consensus 33 evf~natg~lRNlSs---a~~~aRq~mR~c~gL--------------IdSl~~~i~~~v~------~~~~d~kgvEN~Vc 89 (200)
+++.++++++||+|+ .++..|+.++++.++ ...++.+|.++.. ....+.++|+-+|.
T Consensus 233 ~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~ 312 (354)
T 3nmw_A 233 AIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKN 312 (354)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHH
Confidence 477889999999998 588999999987532 2455556665552 12455666676666
Q ss_pred hhcCCCCcchHHHHHHHHHHHHhhch
Q psy15594 90 ITKQRQKYTPRVLKFAGQVLFTMWQH 115 (200)
Q Consensus 90 IlrnlS~~~~k~~kAAs~lL~smW~~ 115 (200)
++++. .++..+.|.-.|.++=.+
T Consensus 313 LL~s~---~~~i~~~A~~aL~nL~~~ 335 (354)
T 3nmw_A 313 LIHSK---HKMIAMGSAAALRNLMAN 335 (354)
T ss_dssp TTTCS---SHHHHHHHHHHHHHHHTT
T ss_pred HHhCC---CHHHHHHHHHHHHHHHcC
Confidence 66542 245556666666655544
No 7
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=92.10 E-value=0.22 Score=45.62 Aligned_cols=80 Identities=21% Similarity=0.248 Sum_probs=57.5
Q ss_pred HHHhhhhhhhhcccc---ccHHHHHHhhhhhhH--------------HHHHHHHHHHHHH------hhccCCcchhhhHh
Q psy15594 33 EVIKKNAEFSRNASS---AGEYARKKLRECEGL--------------IDSLLYVVKSAIE------KSLLESGGVERLMN 89 (200)
Q Consensus 33 evf~natg~lRNlSs---a~~~aRq~mR~c~gL--------------IdSl~~~i~~~v~------~~~~d~kgvEN~Vc 89 (200)
+++.++++++||+|+ .++..|+.|+++.++ ...++++|.++.. ....+.++++-++.
T Consensus 349 ~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~I~~Lv~ 428 (458)
T 3nmz_A 349 AIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKN 428 (458)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHH
Confidence 477889999999998 688999999987532 2566777777663 22566777888888
Q ss_pred hhcCCCCcchHHHHHHHHHHHHhhch
Q psy15594 90 ITKQRQKYTPRVLKFAGQVLFTMWQH 115 (200)
Q Consensus 90 IlrnlS~~~~k~~kAAs~lL~smW~~ 115 (200)
++++. .++..+.|...|.++=.+
T Consensus 429 LL~s~---~~~v~~~Aa~AL~nL~~~ 451 (458)
T 3nmz_A 429 LIHSK---HKMIAMGSAAALRNLMAN 451 (458)
T ss_dssp TTTCS---SHHHHHHHHHHHHHHHTC
T ss_pred HHhCC---CHHHHHHHHHHHHHHHcC
Confidence 77652 356667777777776544
No 8
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=90.73 E-value=1.6 Score=33.16 Aligned_cols=93 Identities=13% Similarity=0.240 Sum_probs=67.8
Q ss_pred HHHHhhhhhhhhccccccHHHHHHhhhhh--------------hHHHHHHHHHHHHHH------hhccCCcchhhhHhhh
Q psy15594 32 NEVIKKNAEFSRNASSAGEYARKKLRECE--------------GLIDSLLYVVKSAIE------KSLLESGGVERLMNIT 91 (200)
Q Consensus 32 ~evf~natg~lRNlSsa~~~aRq~mR~c~--------------gLIdSl~~~i~~~v~------~~~~d~kgvEN~VcIl 91 (200)
.++...+..++.|++..++..++.+.+.. .+...+++.|.++.. ....+.++++.++.++
T Consensus 68 ~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll 147 (210)
T 4db6_A 68 EQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLL 147 (210)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHH
Confidence 34667788899999988887777776543 223677778887764 2345788999999999
Q ss_pred cCCCCcchHHHHHHHHHHHHhhch-hHhHHHHHHcCC
Q psy15594 92 KQRQKYTPRVLKFAGQVLFTMWQH-QELREVYKKHGW 127 (200)
Q Consensus 92 rnlS~~~~k~~kAAs~lL~smW~~-keL~~~yKK~G~ 127 (200)
++. .++..+.|...|.++-.+ .+.+..+.+.|.
T Consensus 148 ~~~---~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~ 181 (210)
T 4db6_A 148 SSP---NEQILQEALWALSNIASGGNEQKQAVKEAGA 181 (210)
T ss_dssp TCS---CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTH
T ss_pred cCC---CHHHHHHHHHHHHHHHcCCcHHHHHHHHCCC
Confidence 863 467778888888888877 677766666664
No 9
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=86.65 E-value=1.6 Score=36.57 Aligned_cols=91 Identities=19% Similarity=0.277 Sum_probs=64.9
Q ss_pred HHhhhhhhhhccccccHHHHHHhhhhhhH--------------HHHHHHHHHHHHHh------hccCCcchhhhHhhhcC
Q psy15594 34 VIKKNAEFSRNASSAGEYARKKLRECEGL--------------IDSLLYVVKSAIEK------SLLESGGVERLMNITKQ 93 (200)
Q Consensus 34 vf~natg~lRNlSsa~~~aRq~mR~c~gL--------------IdSl~~~i~~~v~~------~~~d~kgvEN~VcIlrn 93 (200)
+..++..+++|++..++..|+.+++.-++ -..+++.|+++... ...+.++|+-+|.++++
T Consensus 26 ~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~~ 105 (233)
T 3tt9_A 26 RISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQ 105 (233)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHcc
Confidence 44567778899998888888888876432 26678888887642 26678899999999984
Q ss_pred CCCcchHHHHHHHHHHHHhhchhHhHHHHHHcC
Q psy15594 94 RQKYTPRVLKFAGQVLFTMWQHQELREVYKKHG 126 (200)
Q Consensus 94 lS~~~~k~~kAAs~lL~smW~~keL~~~yKK~G 126 (200)
.......+.|...|++|=.+.+.+..+-+.|
T Consensus 106 --~~~~~~~e~a~~aL~nLS~~~~~k~~i~~~~ 136 (233)
T 3tt9_A 106 --TRDLETKKQITGLLWNLSSNDKLKNLMITEA 136 (233)
T ss_dssp --CCCHHHHHHHHHHHHHHHTSGGGHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHHHcChhhHHHHHhcc
Confidence 2235566777778888877777766554443
No 10
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=86.30 E-value=2.4 Score=38.78 Aligned_cols=90 Identities=19% Similarity=0.206 Sum_probs=61.6
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhhhHHHHHHHHHHH-------------------------------------HHH
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECEGLIDSLLYVVKS-------------------------------------AIE 75 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~gLIdSl~~~i~~-------------------------------------~v~ 75 (200)
++...+.++++|++..++ .++.+.+. |+|..|+..++. +..
T Consensus 368 ~v~~~a~~~L~nLa~~~~-~~~~i~~~-~~i~~Lv~lL~~~~~~vr~~a~~al~n~~~~~~~~~~~v~~~a~~aL~~La~ 445 (644)
T 2z6h_A 368 PLIKATVGLIRNLALCPA-NHAPLREQ-GAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILAR 445 (644)
T ss_dssp HHHHHHHHHHHHHTTSGG-GHHHHHHT-THHHHHHHHHHHHHHHHTTC----------CCSSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHccCHH-HHHHHHHc-CCHHHHHHHHhccchhhhhHhhhccccchhcccccHHHHHHHHHHHHHHHhc
Confidence 566677788889887554 33555543 445555554443 221
Q ss_pred -----hhccCCcchhhhHhhhcCCCCcchHHHHHHHHHHHHhhchhHhHHHHHHcCC
Q psy15594 76 -----KSLLESGGVERLMNITKQRQKYTPRVLKFAGQVLFTMWQHQELREVYKKHGW 127 (200)
Q Consensus 76 -----~~~~d~kgvEN~VcIlrnlS~~~~k~~kAAs~lL~smW~~keL~~~yKK~G~ 127 (200)
....+.++++-++.++.+ ..+...++|...|.+++.+++.+..+++.|.
T Consensus 446 ~~~~~~~l~~~~~i~~Lv~lL~~---~~~~v~~~a~~aL~~l~~~~~~~~~i~~~g~ 499 (644)
T 2z6h_A 446 DVHNRIVIRGLNTIPLFVQLLYS---PIENIQRVAAGVLCELAQDKEAAEAIEAEGA 499 (644)
T ss_dssp SHHHHHHHHHTTCHHHHHHHTTC---SCHHHHHHHHHHHHHHHTSHHHHHHHHHTTC
T ss_pred CHHHHHHHHhCCcHHHHHHHHcC---CCHHHHHHHHHHHHHHHcCHHHHHHHHHcCC
Confidence 123467788888888865 2467788999999999999999998888875
No 11
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=85.57 E-value=3.3 Score=37.91 Aligned_cols=93 Identities=11% Similarity=0.063 Sum_probs=64.0
Q ss_pred HHHHhhhhhhhhccccccHHHHHHhhhhhhHHHHHHHHHH-----------------HHHH---------hhccCCcchh
Q psy15594 32 NEVIKKNAEFSRNASSAGEYARKKLRECEGLIDSLLYVVK-----------------SAIE---------KSLLESGGVE 85 (200)
Q Consensus 32 ~evf~natg~lRNlSsa~~~aRq~mR~c~gLIdSl~~~i~-----------------~~v~---------~~~~d~kgvE 85 (200)
.++..++.++++|++..++..|+.+.+. |.|..|+..+. ++.. ....+.++++
T Consensus 277 ~~v~~~a~~aL~~L~~~~~~~~~~v~~~-g~v~~Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~ 355 (644)
T 2z6h_A 277 INVVTCAAGILSNLTCNNYKNKMMVCQV-GGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLP 355 (644)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHT-THHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHc-CCHHHHHHHHHccCCcHHHHHHHHHHHHHHhcCCchHHHHHHHHHHccChH
Confidence 3567788899999999888888887764 34555555444 3321 1134567888
Q ss_pred hhHhhhcCCCCcchHHHHHHHHHHHHhhchhHhHHHHHHcCC
Q psy15594 86 RLMNITKQRQKYTPRVLKFAGQVLFTMWQHQELREVYKKHGW 127 (200)
Q Consensus 86 N~VcIlrnlS~~~~k~~kAAs~lL~smW~~keL~~~yKK~G~ 127 (200)
.++.++++. ..+...++|...|.++=.+.+-+..+.+.|.
T Consensus 356 ~L~~lL~~~--~~~~v~~~a~~~L~nLa~~~~~~~~i~~~~~ 395 (644)
T 2z6h_A 356 VVVKLLHPP--SHWPLIKATVGLIRNLALCPANHAPLREQGA 395 (644)
T ss_dssp HHHHTTSTT--CCHHHHHHHHHHHHHHTTSGGGHHHHHHTTH
T ss_pred HHHHHhCcc--CchHHHHHHHHHHHHHccCHHHHHHHHHcCC
Confidence 888888752 2356778888999999888777766665554
No 12
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=85.53 E-value=3.3 Score=31.36 Aligned_cols=78 Identities=14% Similarity=0.257 Sum_probs=51.4
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhh--------------hHHHHHHHHHHHHHHh------hccCCcchhhhHhhhc
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECE--------------GLIDSLLYVVKSAIEK------SLLESGGVERLMNITK 92 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~--------------gLIdSl~~~i~~~v~~------~~~d~kgvEN~VcIlr 92 (200)
++...+..+++|++...+..++.+-+.. .+...+++.|.++... ...+.++++.++.++.
T Consensus 111 ~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~L~~ll~ 190 (210)
T 4db6_A 111 QILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQS 190 (210)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHh
Confidence 4677888899999988877766665432 2235556666666542 2445677888888887
Q ss_pred CCCCcchHHHHHHHHHHHHhh
Q psy15594 93 QRQKYTPRVLKFAGQVLFTMW 113 (200)
Q Consensus 93 nlS~~~~k~~kAAs~lL~smW 113 (200)
+. .++..+.|...|..+-
T Consensus 191 ~~---~~~v~~~a~~aL~~l~ 208 (210)
T 4db6_A 191 HE---NEKIQKEAQEALEKLQ 208 (210)
T ss_dssp CS---CHHHHHHHHHHHHHHC
T ss_pred CC---CHHHHHHHHHHHHHHh
Confidence 52 3566677777776654
No 13
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=84.94 E-value=5.8 Score=30.29 Aligned_cols=93 Identities=20% Similarity=0.213 Sum_probs=63.2
Q ss_pred HHHHhhhhhhhhccccccHHHHHHhhhhh--------------hHHHHHHHHHHHHHH------hhccCCcchhhhHhhh
Q psy15594 32 NEVIKKNAEFSRNASSAGEYARKKLRECE--------------GLIDSLLYVVKSAIE------KSLLESGGVERLMNIT 91 (200)
Q Consensus 32 ~evf~natg~lRNlSsa~~~aRq~mR~c~--------------gLIdSl~~~i~~~v~------~~~~d~kgvEN~VcIl 91 (200)
.++..++.+++.|++...+..++.+.+.. .+...++..|.++.. ....+.++++.++.++
T Consensus 100 ~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll 179 (252)
T 4hxt_A 100 SEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLL 179 (252)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHH
Confidence 45777888899999988777777766632 223556666666654 2345677888898888
Q ss_pred cCCCCcchHHHHHHHHHHHHhhc-hhHhHHHHHHcCC
Q psy15594 92 KQRQKYTPRVLKFAGQVLFTMWQ-HQELREVYKKHGW 127 (200)
Q Consensus 92 rnlS~~~~k~~kAAs~lL~smW~-~keL~~~yKK~G~ 127 (200)
.+. .+.....|...|.++=. ..+....+.+.|.
T Consensus 180 ~~~---~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~ 213 (252)
T 4hxt_A 180 TST---DSEVQKEAARALANIASGPTSAIKAIVDAGG 213 (252)
T ss_dssp TCS---CHHHHHHHHHHHHHHTTSBHHHHHHHHHTTH
T ss_pred CCC---CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCC
Confidence 752 35666777778888765 4566666666554
No 14
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=83.28 E-value=1.9 Score=33.56 Aligned_cols=80 Identities=15% Similarity=0.287 Sum_probs=49.5
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhh--------------hHHHHHHHHHHHHHH------hhccCCcchhhhHhhhc
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECE--------------GLIDSLLYVVKSAIE------KSLLESGGVERLMNITK 92 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~--------------gLIdSl~~~i~~~v~------~~~~d~kgvEN~VcIlr 92 (200)
++...+..++.|++..++..++.+-+.. .+...+++.|.++.. ....+.++++.++.+++
T Consensus 153 ~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~ 232 (252)
T 4db8_A 153 QILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQS 232 (252)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhC
Confidence 4666788888899887766666554421 223555666666553 12356677777777776
Q ss_pred CCCCcchHHHHHHHHHHHHhhch
Q psy15594 93 QRQKYTPRVLKFAGQVLFTMWQH 115 (200)
Q Consensus 93 nlS~~~~k~~kAAs~lL~smW~~ 115 (200)
+. .++..+.|...|.++..|
T Consensus 233 ~~---~~~v~~~A~~~L~~l~~~ 252 (252)
T 4db8_A 233 HE---NEKIQKEAQEALEKLQSH 252 (252)
T ss_dssp CS---SSHHHHTHHHHHHTTC--
T ss_pred CC---CHHHHHHHHHHHHHHhcC
Confidence 52 356667777777777653
No 15
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=82.87 E-value=5.4 Score=38.07 Aligned_cols=91 Identities=19% Similarity=0.204 Sum_probs=62.6
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhhhHHHHHHHHHHH-------------------------------------HHH
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECEGLIDSLLYVVKS-------------------------------------AIE 75 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~gLIdSl~~~i~~-------------------------------------~v~ 75 (200)
+|...+.++++|++..+ ..++.+.+. |+|..|+..++. +..
T Consensus 504 ~v~~~A~~aL~nLa~~~-~~~~~i~~~-g~i~~Lv~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v~~~a~~aL~~La~ 581 (780)
T 2z6g_A 504 PLIKATVGLIRNLALCP-ANHAPLREQ-GAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHILAR 581 (780)
T ss_dssp HHHHHHHHHHHHHHSSH-HHHHHHHHT-THHHHHHHHHHHHHHHHHHTTC------CCSTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCH-HHHHHHHHC-CCHHHHHHHHHhcchhHHHHHhhccccchhhcccChHHHHHHHHHHHHHHhc
Confidence 57778888899998644 444555542 455555555443 111
Q ss_pred -----hhccCCcchhhhHhhhcCCCCcchHHHHHHHHHHHHhhchhHhHHHHHHcCCc
Q psy15594 76 -----KSLLESGGVERLMNITKQRQKYTPRVLKFAGQVLFTMWQHQELREVYKKHGWK 128 (200)
Q Consensus 76 -----~~~~d~kgvEN~VcIlrnlS~~~~k~~kAAs~lL~smW~~keL~~~yKK~G~k 128 (200)
....+.++|+-++.++++. .+...++|...|+.++.+++.+..+.+.|..
T Consensus 582 ~~~~~~~l~~~~~i~~Lv~lL~~~---~~~v~~~a~~aL~~L~~~~~~~~~i~~~g~i 636 (780)
T 2z6g_A 582 DIHNRIVIRGLNTIPLFVQLLYSP---IENIQRVAAGVLCELAQDKEAAEAIEAEGAT 636 (780)
T ss_dssp SHHHHHHHHHTCCHHHHHHGGGCS---CHHHHHHHHHHHHHHHTSHHHHHHHHHTTCH
T ss_pred ChhhHHHHHHCCcHHHHHHHHcCC---CHHHHHHHHHHHHHHhcCHHHHHHHHHCCCH
Confidence 1133677888888888752 4677888999999999999999988887754
No 16
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=81.30 E-value=6.2 Score=33.97 Aligned_cols=93 Identities=9% Similarity=0.053 Sum_probs=63.8
Q ss_pred HHHHhhhhhhhhccccccHHHHHHhhhhhhHHHHHH-----------------HHHHHHHH---------hhccCCcchh
Q psy15594 32 NEVIKKNAEFSRNASSAGEYARKKLRECEGLIDSLL-----------------YVVKSAIE---------KSLLESGGVE 85 (200)
Q Consensus 32 ~evf~natg~lRNlSsa~~~aRq~mR~c~gLIdSl~-----------------~~i~~~v~---------~~~~d~kgvE 85 (200)
.++..++.+++.|++..++..++.+.+.. .|..|+ ..+.++.. ....+.++++
T Consensus 280 ~~v~~~a~~~L~~L~~~~~~~~~~~~~~~-~v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~ 358 (529)
T 1jdh_A 280 INVVTCAAGILSNLTCNNYKNKMMVCQVG-GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLP 358 (529)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHTT-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHcC-ChHHHHHHHHccCCHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHcCChh
Confidence 35677888999999998888888877653 333333 34444322 1334557888
Q ss_pred hhHhhhcCCCCcchHHHHHHHHHHHHhhchhHhHHHHHHcCC
Q psy15594 86 RLMNITKQRQKYTPRVLKFAGQVLFTMWQHQELREVYKKHGW 127 (200)
Q Consensus 86 N~VcIlrnlS~~~~k~~kAAs~lL~smW~~keL~~~yKK~G~ 127 (200)
-++.++++. ..+...++|...|.++-.+.+-+..+.+.|.
T Consensus 359 ~L~~lL~~~--~~~~v~~~a~~~l~nl~~~~~~~~~~~~~~~ 398 (529)
T 1jdh_A 359 VVVKLLHPP--SHWPLIKATVGLIRNLALCPANHAPLREQGA 398 (529)
T ss_dssp HHHHTTSTT--CCHHHHHHHHHHHHHHTTSGGGHHHHHHTTH
T ss_pred HHHHHhccc--cchHHHHHHHHHHHHHhcChhhhHHHHHcCC
Confidence 888888753 2346778888899999988877776666664
No 17
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=80.80 E-value=9.8 Score=33.21 Aligned_cols=89 Identities=16% Similarity=0.119 Sum_probs=57.7
Q ss_pred HHHHhhhhhhhhccccccHHHHHHhhhhhhHH---------------HHHHHHHHHHHHh-------hccCCcchhhhHh
Q psy15594 32 NEVIKKNAEFSRNASSAGEYARKKLRECEGLI---------------DSLLYVVKSAIEK-------SLLESGGVERLMN 89 (200)
Q Consensus 32 ~evf~natg~lRNlSsa~~~aRq~mR~c~gLI---------------dSl~~~i~~~v~~-------~~~d~kgvEN~Vc 89 (200)
.++-++++..++|++..++..|+.++...|.| ..+++.|+++... ...+.++|+-+|.
T Consensus 98 ~~~q~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~ 177 (354)
T 3nmw_A 98 ITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALME 177 (354)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHcCCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHH
Confidence 34667889999999998888888877666644 3456666666542 1356788999998
Q ss_pred hhcCCCCcchHHHHHHHHHHHHhhc-hhHhHHHH
Q psy15594 90 ITKQRQKYTPRVLKFAGQVLFTMWQ-HQELREVY 122 (200)
Q Consensus 90 IlrnlS~~~~k~~kAAs~lL~smW~-~keL~~~y 122 (200)
++.. ...+...+.|...|.++=. ..+.+..+
T Consensus 178 lL~~--~~~~~~~~~A~~aL~nLs~~~~~nk~~i 209 (354)
T 3nmw_A 178 CALE--VKKESTLKSVLSALWNLSAHCTENKADI 209 (354)
T ss_dssp HHHH--CCCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHhc--CCCHHHHHHHHHHHHHHHccChhhhHHH
Confidence 7532 1235556666666766655 33444433
No 18
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=80.16 E-value=7 Score=33.35 Aligned_cols=94 Identities=13% Similarity=0.145 Sum_probs=65.4
Q ss_pred HHhhhhhhhhccccccHHHHHHhhhhhh---------------HHHHHHHHHHHHHHh------hccCCcchhhhHhhhc
Q psy15594 34 VIKKNAEFSRNASSAGEYARKKLRECEG---------------LIDSLLYVVKSAIEK------SLLESGGVERLMNITK 92 (200)
Q Consensus 34 vf~natg~lRNlSsa~~~aRq~mR~c~g---------------LIdSl~~~i~~~v~~------~~~d~kgvEN~VcIlr 92 (200)
|-..+..++.|+...++..|+.+-++.+ +...++|.|-+++.. ...+.++++-++.+++
T Consensus 98 vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~ 177 (296)
T 1xqr_A 98 LRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQ 177 (296)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHc
Confidence 4445666777777777777776665532 235566777766642 2446789999999998
Q ss_pred CCCCcchHHHHHHHHHHHHhhch-hHhHHHHHHcCCccc
Q psy15594 93 QRQKYTPRVLKFAGQVLFTMWQH-QELREVYKKHGWKEQ 130 (200)
Q Consensus 93 nlS~~~~k~~kAAs~lL~smW~~-keL~~~yKK~G~kK~ 130 (200)
+. .++.-+.|.-+|.+++.+ .+.+..+-+.|+-+.
T Consensus 178 ~~---d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~ 213 (296)
T 1xqr_A 178 QQ---VQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQ 213 (296)
T ss_dssp SS---CHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHH
T ss_pred CC---CHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHH
Confidence 62 467778889999999987 467778888887543
No 19
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=79.65 E-value=6.8 Score=29.89 Aligned_cols=80 Identities=24% Similarity=0.259 Sum_probs=53.6
Q ss_pred HHHHhhhhhhhhccccccHHHHHHhhhhhhHH---------------HHHHHHHHHHHH------hhccCCcchhhhHhh
Q psy15594 32 NEVIKKNAEFSRNASSAGEYARKKLRECEGLI---------------DSLLYVVKSAIE------KSLLESGGVERLMNI 90 (200)
Q Consensus 32 ~evf~natg~lRNlSsa~~~aRq~mR~c~gLI---------------dSl~~~i~~~v~------~~~~d~kgvEN~VcI 90 (200)
.++...+..++.|++..++..++.+.+ .|.| ..+++.|.++.. ....+.++++.++.+
T Consensus 142 ~~~~~~a~~~L~~l~~~~~~~~~~~~~-~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~i~~L~~l 220 (252)
T 4hxt_A 142 SEVQKEAARALANIASGPDEAIKAIVD-AGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKL 220 (252)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHHTTHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHH-CcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHH
Confidence 357778889999999988877776665 3333 445555555543 124467788888888
Q ss_pred hcCCCCcchHHHHHHHHHHHHhhch
Q psy15594 91 TKQRQKYTPRVLKFAGQVLFTMWQH 115 (200)
Q Consensus 91 lrnlS~~~~k~~kAAs~lL~smW~~ 115 (200)
+++. .++..+.|...|.++..+
T Consensus 221 l~~~---~~~v~~~a~~~L~~l~~~ 242 (252)
T 4hxt_A 221 LTST---DSEVQKEAQRALENIKSG 242 (252)
T ss_dssp GGCS---CHHHHHHHHHHHHHHHHT
T ss_pred HCCC---cHHHHHHHHHHHHHHHcC
Confidence 8752 356667777777777543
No 20
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=78.18 E-value=3.4 Score=35.60 Aligned_cols=92 Identities=17% Similarity=0.112 Sum_probs=61.5
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhhhHHHHHH---------------HHHHHHHH------hhccCCcchhhhHhhh
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECEGLIDSLL---------------YVVKSAIE------KSLLESGGVERLMNIT 91 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~gLIdSl~---------------~~i~~~v~------~~~~d~kgvEN~VcIl 91 (200)
++...+..+++|+++.++..++.+.+.. .|..|+ ..+.++.. ....+.++++.++.++
T Consensus 116 ~v~~~a~~~L~~l~~~~~~~~~~i~~~g-~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll 194 (529)
T 1jdh_A 116 SVLFYAITTLHNLLLHQEGAKMAVRLAG-GLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIM 194 (529)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHT-HHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHcC-CHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHH
Confidence 4667888899999888766677666543 333333 33433332 1135668899999999
Q ss_pred cCCCCcchHHHHHHHHHHHHhhchhHhHHHHHHcCC
Q psy15594 92 KQRQKYTPRVLKFAGQVLFTMWQHQELREVYKKHGW 127 (200)
Q Consensus 92 rnlS~~~~k~~kAAs~lL~smW~~keL~~~yKK~G~ 127 (200)
++. ..+....+|..+|.++=.+.+.+..+-+.|.
T Consensus 195 ~~~--~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~ 228 (529)
T 1jdh_A 195 RTY--TYEKLLWTTSRVLKVLSVCSSNKPAIVEAGG 228 (529)
T ss_dssp HHC--CCHHHHHHHHHHHHHHTTSTTHHHHHHHTTH
T ss_pred HhC--ChHHHHHHHHHHHHHHhcCcccHHHHHHCCC
Confidence 873 3455667788888888888888777766663
No 21
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=76.76 E-value=11 Score=36.00 Aligned_cols=93 Identities=11% Similarity=0.063 Sum_probs=64.0
Q ss_pred HHHHhhhhhhhhccccccHHHHHHhhhhhhHHHHHHHHHH-----------------HHHH---------hhccCCcchh
Q psy15594 32 NEVIKKNAEFSRNASSAGEYARKKLRECEGLIDSLLYVVK-----------------SAIE---------KSLLESGGVE 85 (200)
Q Consensus 32 ~evf~natg~lRNlSsa~~~aRq~mR~c~gLIdSl~~~i~-----------------~~v~---------~~~~d~kgvE 85 (200)
.++..++..++.|++..++..++.+.+. |.|..|+..+. ++.. ....+.++++
T Consensus 413 ~~vr~~A~~aL~~L~~~~~~~~~~i~~~-g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l~ 491 (780)
T 2z6g_A 413 INVVTCAAGILSNLTCNNYKNKMMVCQV-GGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLP 491 (780)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHTT-THHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHC-CCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHcCCHH
Confidence 3567788999999999988888777654 34444444443 3221 1233456788
Q ss_pred hhHhhhcCCCCcchHHHHHHHHHHHHhhchhHhHHHHHHcCC
Q psy15594 86 RLMNITKQRQKYTPRVLKFAGQVLFTMWQHQELREVYKKHGW 127 (200)
Q Consensus 86 N~VcIlrnlS~~~~k~~kAAs~lL~smW~~keL~~~yKK~G~ 127 (200)
-++.++++. ..+...++|...|.++-.+.+-+..+.+.|.
T Consensus 492 ~L~~lL~~~--~~~~v~~~A~~aL~nLa~~~~~~~~i~~~g~ 531 (780)
T 2z6g_A 492 VVVKLLHPP--SHWPLIKATVGLIRNLALCPANHAPLREQGA 531 (780)
T ss_dssp HHHHTTSTT--CCHHHHHHHHHHHHHHHSSHHHHHHHHHTTH
T ss_pred HHHHHhcCC--ChHHHHHHHHHHHHHHhcCHHHHHHHHHCCC
Confidence 888888753 2347778999999999988877777766664
No 22
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=75.75 E-value=15 Score=33.50 Aligned_cols=89 Identities=16% Similarity=0.119 Sum_probs=57.1
Q ss_pred HHHHhhhhhhhhccccccHHHHHHhhhhhhHH---------------HHHHHHHHHHHHh-------hccCCcchhhhHh
Q psy15594 32 NEVIKKNAEFSRNASSAGEYARKKLRECEGLI---------------DSLLYVVKSAIEK-------SLLESGGVERLMN 89 (200)
Q Consensus 32 ~evf~natg~lRNlSsa~~~aRq~mR~c~gLI---------------dSl~~~i~~~v~~-------~~~d~kgvEN~Vc 89 (200)
.++.++++..++|++..++..|+.+.+..|.| ..+|++|+++... ...+.++|+-+|.
T Consensus 214 ~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~ 293 (458)
T 3nmz_A 214 ITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALME 293 (458)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHH
Confidence 34667899999999998887887776666644 3455666665431 2356788888888
Q ss_pred hhcCCCCcchHHHHHHHHHHHHhhc-hhHhHHHH
Q psy15594 90 ITKQRQKYTPRVLKFAGQVLFTMWQ-HQELREVY 122 (200)
Q Consensus 90 IlrnlS~~~~k~~kAAs~lL~smW~-~keL~~~y 122 (200)
++.. ...+...+.|...|.++=. ..+.+..+
T Consensus 294 lLl~--s~~~~v~~~A~~aL~nLs~~~~~nk~~I 325 (458)
T 3nmz_A 294 CALE--VKKESTLKSVLSALWNLSAHCTENKADI 325 (458)
T ss_dssp HHTT--CCSHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHhc--CCCHHHHHHHHHHHHHHccCCHHHHHHH
Confidence 7543 1235556666666666655 33444433
No 23
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=74.37 E-value=21 Score=27.46 Aligned_cols=92 Identities=12% Similarity=0.193 Sum_probs=62.0
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhh--------------hHHHHHHHHHHHHHH------hhccCCcchhhhHhhhc
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECE--------------GLIDSLLYVVKSAIE------KSLLESGGVERLMNITK 92 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~--------------gLIdSl~~~i~~~v~------~~~~d~kgvEN~VcIlr 92 (200)
++...+..++.|++...+..++.+.+.. .+...+++.|.++.. ....+.++++-++.+++
T Consensus 69 ~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~ 148 (252)
T 4db8_A 69 QILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 148 (252)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHh
Confidence 4667788899999988877777776642 223556666666553 23556778999999987
Q ss_pred CCCCcchHHHHHHHHHHHHhhchh-HhHHHHHHcCC
Q psy15594 93 QRQKYTPRVLKFAGQVLFTMWQHQ-ELREVYKKHGW 127 (200)
Q Consensus 93 nlS~~~~k~~kAAs~lL~smW~~k-eL~~~yKK~G~ 127 (200)
+. .+...+.|...|.++-.+. +....+-+.|.
T Consensus 149 ~~---~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~ 181 (252)
T 4db8_A 149 SP---NEQILQEALWALSNIASGGNEQIQAVIDAGA 181 (252)
T ss_dssp CS---CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTC
T ss_pred CC---CHHHHHHHHHHHHHHHcCChHHHHHHHHCCC
Confidence 63 4677788888888888643 44444444443
No 24
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=64.93 E-value=30 Score=30.82 Aligned_cols=93 Identities=10% Similarity=0.075 Sum_probs=65.3
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhhh--------------HHHHHHHHHHHHHH------hhccCCcchhhhHhhhc
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECEG--------------LIDSLLYVVKSAIE------KSLLESGGVERLMNITK 92 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~g--------------LIdSl~~~i~~~v~------~~~~d~kgvEN~VcIlr 92 (200)
.+...+..+++|+++.++..++.+-++.+ +...+|++|.++.. ....+.+.++-++.+++
T Consensus 308 ~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~ 387 (529)
T 3tpo_A 308 PIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLS 387 (529)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhc
Confidence 35567788899999888877777666542 23568888888765 23567889999999998
Q ss_pred CCCCcchHHHHHHHHHHHHhhchh--HhHHHHHHcCCc
Q psy15594 93 QRQKYTPRVLKFAGQVLFTMWQHQ--ELREVYKKHGWK 128 (200)
Q Consensus 93 nlS~~~~k~~kAAs~lL~smW~~k--eL~~~yKK~G~k 128 (200)
+. ..+..+.|...|.++=.+. +....+-+.|.-
T Consensus 388 ~~---~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g~i 422 (529)
T 3tpo_A 388 KA---DFKTQKAAAWAITNYTSGGTVEQIVYLVHCGII 422 (529)
T ss_dssp SS---CHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCH
T ss_pred CC---CHHHHHHHHHHHHHHHcCCCHHHHHHHHHCcCH
Confidence 63 3566777888888876543 444556666654
No 25
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=64.39 E-value=28 Score=31.01 Aligned_cols=93 Identities=10% Similarity=0.069 Sum_probs=66.7
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhh--------------hHHHHHHHHHHHHHH------hhccCCcchhhhHhhhc
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECE--------------GLIDSLLYVVKSAIE------KSLLESGGVERLMNITK 92 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~--------------gLIdSl~~~i~~~v~------~~~~d~kgvEN~VcIlr 92 (200)
.+...+..++.|+++.++..++.+-++. .+...+|+.|.++.. ....+.+.++.++.+++
T Consensus 289 ~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~ 368 (510)
T 3ul1_B 289 PIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLS 368 (510)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHH
T ss_pred hhhhHHHHHHHHhhcCCHHHHHHHhhccchHHHHHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHc
Confidence 4666778889999988887777766554 334678888888765 23667889999999998
Q ss_pred CCCCcchHHHHHHHHHHHHhhchh--HhHHHHHHcCCc
Q psy15594 93 QRQKYTPRVLKFAGQVLFTMWQHQ--ELREVYKKHGWK 128 (200)
Q Consensus 93 nlS~~~~k~~kAAs~lL~smW~~k--eL~~~yKK~G~k 128 (200)
+- ..+..+.|...|.++-.+. +-...+-+.|.-
T Consensus 369 ~~---~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g~i 403 (510)
T 3ul1_B 369 KA---DFKTQKEAAWAITNYTSGGTVEQIVYLVHCGII 403 (510)
T ss_dssp SS---CHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCH
T ss_pred CC---CHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCH
Confidence 63 3567788888888887643 444456566654
No 26
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=61.44 E-value=21 Score=33.50 Aligned_cols=95 Identities=12% Similarity=0.029 Sum_probs=57.9
Q ss_pred HHHHhhhhhhhhcccccc-HHHHHHhhh------hh-----------------------------hHHHHHHHHHHHHHH
Q psy15594 32 NEVIKKNAEFSRNASSAG-EYARKKLRE------CE-----------------------------GLIDSLLYVVKSAIE 75 (200)
Q Consensus 32 ~evf~natg~lRNlSsa~-~~aRq~mR~------c~-----------------------------gLIdSl~~~i~~~v~ 75 (200)
.+|...|.|++|||+..+ ......|-+ +. .+.+.+++.+.++..
T Consensus 90 ~~Vr~~A~gaLrnL~~~~g~d~~~~l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e 169 (684)
T 4gmo_A 90 IDSRAAGWEILKVLAQEEEADFCVHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLAL 169 (684)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCchHHHHHHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 347788899999998764 333332211 11 122334445544433
Q ss_pred ------hhccCCcchhhhHhhhcCCCCcchHHHHHHHHHHHHhhchh-HhHHHHHHcC
Q psy15594 76 ------KSLLESGGVERLMNITKQRQKYTPRVLKFAGQVLFTMWQHQ-ELREVYKKHG 126 (200)
Q Consensus 76 ------~~~~d~kgvEN~VcIlrnlS~~~~k~~kAAs~lL~smW~~k-eL~~~yKK~G 126 (200)
+...+.+++..+|..+.+..-.+.....+|.+.|+.+.... ++...+..+|
T Consensus 170 ~s~~~~~~v~~~~~l~~l~~~L~~~~~~~~~v~~~a~~~L~~ls~dn~~~~~~i~~~~ 227 (684)
T 4gmo_A 170 ARDEIHEAVATKQTILRLLFRLISADIAPQDIYEEAISCLTTLSEDNLKVGQAITDDQ 227 (684)
T ss_dssp HCHHHHHHHHTCHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHTTCHHHHHHHHTCC
T ss_pred CCHHHHHHHHhcccHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhccCHHHHHHHHhcc
Confidence 23556778888888876544455677899999999998753 5544444444
No 27
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=60.05 E-value=19 Score=32.12 Aligned_cols=70 Identities=16% Similarity=0.168 Sum_probs=41.1
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhhhHHHHHHHHHHHHHHhhccCCcchhhhHhhhcCCCCcchHHHHHHHHHHHHh
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECEGLIDSLLYVVKSAIEKSLLESGGVERLMNITKQRQKYTPRVLKFAGQVLFTM 112 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~gLIdSl~~~i~~~v~~~~~d~kgvEN~VcIlrnlS~~~~k~~kAAs~lL~sm 112 (200)
++...|+.++.|+++.+.+.++.+ ++.++|+-+|.++++. .+...+.|...|.++
T Consensus 116 ~lq~~Aa~aL~nias~~~e~~~~v----------------------v~~GaIp~Lv~lL~s~---~~~v~e~A~~aL~nL 170 (510)
T 3ul1_B 116 PIQFESAWALTNIASGTSEQTKAV----------------------VDGGAIPAFISLLASP---HAHISEQAVWALGNI 170 (510)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHH----------------------HHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHH----------------------HHCCCHHHHHHHHcCC---CHHHHHHHHHHHHHH
Confidence 455667777777776665544433 4455666666666542 245556666666666
Q ss_pred hch-hHhHHHHHHcCC
Q psy15594 113 WQH-QELREVYKKHGW 127 (200)
Q Consensus 113 W~~-keL~~~yKK~G~ 127 (200)
-.+ .+.+..+.+.|.
T Consensus 171 a~d~~~~r~~v~~~G~ 186 (510)
T 3ul1_B 171 AGDGSAFRDLVIKHGA 186 (510)
T ss_dssp HTTCHHHHHHHHHTTC
T ss_pred HhCCHHHHHHHHHcCC
Confidence 554 455666555554
No 28
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=52.74 E-value=80 Score=28.00 Aligned_cols=79 Identities=11% Similarity=0.192 Sum_probs=56.0
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhh--------------hHHHHHHHHHHHHHHh-------hccCCcchhhhHhhh
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECE--------------GLIDSLLYVVKSAIEK-------SLLESGGVERLMNIT 91 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~--------------gLIdSl~~~i~~~v~~-------~~~d~kgvEN~VcIl 91 (200)
++...+..++.|++..++..++.+.+.. .+...+++.|.|++.. ...+.++++-++.++
T Consensus 350 ~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g~i~~L~~LL 429 (529)
T 3tpo_A 350 NIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLL 429 (529)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGG
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCcCHHHHHHHh
Confidence 3556788899999988888787776642 1225677788887652 256788999999998
Q ss_pred cCCCCcchHHHHHHHHHHHHhhc
Q psy15594 92 KQRQKYTPRVLKFAGQVLFTMWQ 114 (200)
Q Consensus 92 rnlS~~~~k~~kAAs~lL~smW~ 114 (200)
+.. .++....|-..|.++-+
T Consensus 430 ~~~---d~~i~~~~L~aL~nil~ 449 (529)
T 3tpo_A 430 SAK---DTKIIQVILDAISNIFQ 449 (529)
T ss_dssp GCS---CHHHHHHHHHHHHHHHH
T ss_pred cCC---CHHHHHHHHHHHHHHHH
Confidence 753 36677777777777664
No 29
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=46.62 E-value=85 Score=27.28 Aligned_cols=92 Identities=9% Similarity=0.113 Sum_probs=60.8
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhh---------------hhHHHHHHHHHHHHHH------hhccCCcchhhhHhhh
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLREC---------------EGLIDSLLYVVKSAIE------KSLLESGGVERLMNIT 91 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c---------------~gLIdSl~~~i~~~v~------~~~~d~kgvEN~VcIl 91 (200)
++...+..++.|++...+..++.+-+. ..+...+|++|.++.. ...++.+.++-++.++
T Consensus 301 ~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~i~~L~~lL 380 (528)
T 4b8j_A 301 SVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLL 380 (528)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH
Confidence 356677788888888776665554432 1233566777777664 2245668888899888
Q ss_pred cCCCCcchHHHHHHHHHHHHhhch--hHhHHHHHHcCC
Q psy15594 92 KQRQKYTPRVLKFAGQVLFTMWQH--QELREVYKKHGW 127 (200)
Q Consensus 92 rnlS~~~~k~~kAAs~lL~smW~~--keL~~~yKK~G~ 127 (200)
.+. .++..+.|...|.++=.+ .+....+-+.|.
T Consensus 381 ~~~---~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~ 415 (528)
T 4b8j_A 381 QTA---EFDIKKEAAWAISNATSGGSHDQIKYLVSEGC 415 (528)
T ss_dssp HHS---CHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTC
T ss_pred hcC---CHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCC
Confidence 763 467778888888888765 455555655554
No 30
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=46.36 E-value=60 Score=28.25 Aligned_cols=80 Identities=13% Similarity=0.108 Sum_probs=54.3
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhh--------------hHHHHHHHHHHHHHH------hhccCCcchhhhHhhhc
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECE--------------GLIDSLLYVVKSAIE------KSLLESGGVERLMNITK 92 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~--------------gLIdSl~~~i~~~v~------~~~~d~kgvEN~VcIlr 92 (200)
++..++..++.|++.......+.+.+.. .+...++.+|.++.. ...++.++++-++.++.
T Consensus 259 ~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~ 338 (528)
T 4b8j_A 259 EVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLT 338 (528)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHc
Confidence 5677888899999988766655554421 233566667766654 23567888999999998
Q ss_pred CCCCcchHHHHHHHHHHHHhhc
Q psy15594 93 QRQKYTPRVLKFAGQVLFTMWQ 114 (200)
Q Consensus 93 nlS~~~~k~~kAAs~lL~smW~ 114 (200)
+. ..+...+.|...|.++=.
T Consensus 339 ~~--~~~~v~~~A~~~L~nl~~ 358 (528)
T 4b8j_A 339 QN--LKKSIKKEACWTISNITA 358 (528)
T ss_dssp SC--CCHHHHHHHHHHHHHHHT
T ss_pred CC--CcHHHHHHHHHHHHHHHC
Confidence 52 246667778778887743
No 31
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=37.24 E-value=1.1e+02 Score=30.10 Aligned_cols=90 Identities=9% Similarity=0.054 Sum_probs=60.8
Q ss_pred HHhhhhhhhhccccccHHHHHHhhh-hh--------------hHHHHHHHHHHHHHH------hhccC-CcchhhhHhhh
Q psy15594 34 VIKKNAEFSRNASSAGEYARKKLRE-CE--------------GLIDSLLYVVKSAIE------KSLLE-SGGVERLMNIT 91 (200)
Q Consensus 34 vf~natg~lRNlSsa~~~aRq~mR~-c~--------------gLIdSl~~~i~~~v~------~~~~d-~kgvEN~VcIl 91 (200)
|..++..++.|++..++...+.+ + .. ++-..+|+.|-++.. +..++ .++++-+|.++
T Consensus 639 Vq~~A~~~L~NLa~~~~~~~~~v-~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL 717 (810)
T 3now_A 639 LTRAAAQCLCNLVMSEDVIKMFE-GNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLI 717 (810)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHH-SSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCChHHHHHHH-hccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHH
Confidence 56778999999998776433333 3 11 222456777777665 33666 79999999999
Q ss_pred cCCCCcchHHHHHHHHHHHHh-hchhHhHHHHHHcCC
Q psy15594 92 KQRQKYTPRVLKFAGQVLFTM-WQHQELREVYKKHGW 127 (200)
Q Consensus 92 rnlS~~~~k~~kAAs~lL~sm-W~~keL~~~yKK~G~ 127 (200)
++. .++..+.|...|.++ +..++....+.+.|.
T Consensus 718 ~s~---d~~vq~~A~~aL~NL~~~s~e~~~~l~e~G~ 751 (810)
T 3now_A 718 ANP---SPAVQHRGIVIILNMINAGEEIAKKLFETDI 751 (810)
T ss_dssp TCS---SHHHHHHHHHHHHHHHTTCHHHHHHHHTSTH
T ss_pred CCC---CHHHHHHHHHHHHHHHhCCHHHHHHHHHCCC
Confidence 863 366677777777776 445677777777765
No 32
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=34.26 E-value=79 Score=31.18 Aligned_cols=88 Identities=15% Similarity=0.103 Sum_probs=56.9
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhhhHH---------------HHHHHHHHHHHH------hhccCCcchhhhHhhh
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECEGLI---------------DSLLYVVKSAIE------KSLLESGGVERLMNIT 91 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~gLI---------------dSl~~~i~~~v~------~~~~d~kgvEN~VcIl 91 (200)
++-..+.+++.|+++..+...+.+-+..|.| ..+++.|.|++. +...+.++++-++.++
T Consensus 680 ~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~s~e~~~~l~e~G~i~~L~~LL 759 (810)
T 3now_A 680 ETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINAGEEIAKKLFETDIMELLSGLG 759 (810)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHTSTHHHHHTTSC
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHH
Confidence 4667788999999996655444444423333 456666666653 3477888888888888
Q ss_pred cCCCCcchHHHHHHHHHHHHhhchhHhHH
Q psy15594 92 KQRQKYTPRVLKFAGQVLFTMWQHQELRE 120 (200)
Q Consensus 92 rnlS~~~~k~~kAAs~lL~smW~~keL~~ 120 (200)
+.......+..+.|-..|..+=.+.+...
T Consensus 760 ~~~d~~~~~i~e~Al~aL~~ll~~g~~~~ 788 (810)
T 3now_A 760 QLPDDTRAKAREVATQCLAAAERYRIIER 788 (810)
T ss_dssp CCTTSTTHHHHHHHHHHHHHHHHHHTC--
T ss_pred hCcccCcHHHHHHHHHHHHHHHhCCCccC
Confidence 65222346778888877777765555443
No 33
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=27.37 E-value=2.1e+02 Score=23.53 Aligned_cols=79 Identities=10% Similarity=0.100 Sum_probs=50.7
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhh------h--------hHHHHHHHHHHHHHHh------hccCCcchhhhHhhhc
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLREC------E--------GLIDSLLYVVKSAIEK------SLLESGGVERLMNITK 92 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c------~--------gLIdSl~~~i~~~v~~------~~~d~kgvEN~VcIlr 92 (200)
++..++..+++|++......++.+.+. . .+...++..+.++... ..++.++++.++.++.
T Consensus 207 ~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~ 286 (450)
T 2jdq_A 207 DVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLS 286 (450)
T ss_dssp HHHHHHHHHHHHHTSSSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHc
Confidence 466778889999988765555444331 1 1224555666665432 2456688888888887
Q ss_pred CCCCcchHHHHHHHHHHHHhhc
Q psy15594 93 QRQKYTPRVLKFAGQVLFTMWQ 114 (200)
Q Consensus 93 nlS~~~~k~~kAAs~lL~smW~ 114 (200)
+. .+...++|...|.++=.
T Consensus 287 ~~---~~~vr~~a~~~L~~l~~ 305 (450)
T 2jdq_A 287 SP---KESIKKEACWTISNITA 305 (450)
T ss_dssp CS---SHHHHHHHHHHHHHHTT
T ss_pred CC---CHHHHHHHHHHHHHHHc
Confidence 52 35667788888888764
No 34
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=27.31 E-value=2.3e+02 Score=23.33 Aligned_cols=80 Identities=10% Similarity=0.159 Sum_probs=51.5
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhh--------------hHHHHHHHHHHHHHH------hhccCCcchhhhHhhhc
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECE--------------GLIDSLLYVVKSAIE------KSLLESGGVERLMNITK 92 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~--------------gLIdSl~~~i~~~v~------~~~~d~kgvEN~VcIlr 92 (200)
++...+..++.|++...+..++.+-+.. .+...+++.|.++.. ...++.+.++.++.++.
T Consensus 249 ~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~ 328 (450)
T 2jdq_A 249 KVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQ 328 (450)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHh
Confidence 3556677788888887765555443321 223556666666553 12345678888888887
Q ss_pred CCCCcchHHHHHHHHHHHHhhch
Q psy15594 93 QRQKYTPRVLKFAGQVLFTMWQH 115 (200)
Q Consensus 93 nlS~~~~k~~kAAs~lL~smW~~ 115 (200)
+. .++..++|...|.++-.+
T Consensus 329 ~~---~~~v~~~a~~~L~~l~~~ 348 (450)
T 2jdq_A 329 TA---EFRTRKEAAWAITNATSG 348 (450)
T ss_dssp HS---CHHHHHHHHHHHHHHHHH
T ss_pred cC---CHHHHHHHHHHHHHHHcC
Confidence 52 356778888889888654
No 35
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=26.97 E-value=2.3e+02 Score=24.56 Aligned_cols=79 Identities=6% Similarity=0.059 Sum_probs=50.8
Q ss_pred HHhhhhhhhhccccccHHHHHHhhhhh--------------hHHHHHHHHHHHHHH------hhccCCcchhhhHhhhcC
Q psy15594 34 VIKKNAEFSRNASSAGEYARKKLRECE--------------GLIDSLLYVVKSAIE------KSLLESGGVERLMNITKQ 93 (200)
Q Consensus 34 vf~natg~lRNlSsa~~~aRq~mR~c~--------------gLIdSl~~~i~~~v~------~~~~d~kgvEN~VcIlrn 93 (200)
+...+..++.|++...+...+.+-+.. .+...+|+.|.++.. ...++.+.++.++.++.+
T Consensus 315 v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~lL~~ 394 (530)
T 1wa5_B 315 VQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEV 394 (530)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhc
Confidence 445666777888876665555444331 223556666666653 123567888899988865
Q ss_pred CCCcchHHHHHHHHHHHHhhch
Q psy15594 94 RQKYTPRVLKFAGQVLFTMWQH 115 (200)
Q Consensus 94 lS~~~~k~~kAAs~lL~smW~~ 115 (200)
. .++..++|...|.++-.+
T Consensus 395 ~---~~~v~~~a~~aL~~l~~~ 413 (530)
T 1wa5_B 395 A---EYKTKKEACWAISNASSG 413 (530)
T ss_dssp S---CHHHHHHHHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHHHHHHhc
Confidence 2 356778888888888664
No 36
>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}
Probab=26.93 E-value=42 Score=25.07 Aligned_cols=37 Identities=27% Similarity=0.409 Sum_probs=26.2
Q ss_pred CCChhHHHHHHHHHHHHHhhhhhhhhccccccHHHHHHhhhhh-hHHHHHHH
Q psy15594 18 GTSDDTIAAVLATLNEVIKKNAEFSRNASSAGEYARKKLRECE-GLIDSLLY 68 (200)
Q Consensus 18 ~lsd~ti~~vl~~l~evf~natg~lRNlSsa~~~aRq~mR~c~-gLIdSl~~ 68 (200)
..+++.|.-|. .-+|+.| +.|++.|++|. ++++++++
T Consensus 63 ~i~~edi~lv~--------~q~~vs~------~~A~~aL~~~~gDiv~Ai~~ 100 (102)
T 1tr8_A 63 EIPEDDIELVM--------NQTGASR------EDATRALQETGGDLAEAIMR 100 (102)
T ss_dssp CCCHHHHHHHH--------HHHCCCH------HHHHHHHHHTTTCHHHHHHH
T ss_pred CCCHHHHHHHH--------HHhCCCH------HHHHHHHHHcCCCHHHHHHH
Confidence 44555555444 4677887 79999999997 67777665
No 37
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=26.89 E-value=1.7e+02 Score=24.60 Aligned_cols=80 Identities=11% Similarity=0.087 Sum_probs=49.4
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhhhH--------------HHHHHHHHHHHHH------hhccCCcchhhhHhhhc
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECEGL--------------IDSLLYVVKSAIE------KSLLESGGVERLMNITK 92 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~gL--------------IdSl~~~i~~~v~------~~~~d~kgvEN~VcIlr 92 (200)
++..++...+.|+....+...+.+.+..|+ ...+|+.|.+++. ....+.+.++.+|.+++
T Consensus 140 ~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL~ 219 (296)
T 1xqr_A 140 TVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVR 219 (296)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHHc
Confidence 466777788888877766666666553321 1345666666554 23567889999999998
Q ss_pred CCCCcchHHHHHHHHHHHHhhch
Q psy15594 93 QRQKYTPRVLKFAGQVLFTMWQH 115 (200)
Q Consensus 93 nlS~~~~k~~kAAs~lL~smW~~ 115 (200)
+. .++....|...|.++=..
T Consensus 220 ~~---d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 220 TE---HSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp SC---CSTHHHHHHHHHHHHHTT
T ss_pred CC---ChhHHHHHHHHHHHHHhC
Confidence 64 244555555555555433
No 38
>2dc3_A Cytoglobin; myoglobin, heme, oxygen transport, oxygen storage, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.68A {Homo sapiens} PDB: 1v5h_A* 3ag0_A* 1urv_A* 1umo_A* 1ury_A* 1ut0_A* 1ux9_A*
Probab=26.58 E-value=2.3e+02 Score=22.17 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=17.1
Q ss_pred hhcCCCCCC----CCCCCCChhHHHHHHHHHHHHHhh
Q psy15594 5 VQKLPSGNA----QHDQGTSDDTIAAVLATLNEVIKK 37 (200)
Q Consensus 5 v~kLp~~~~----~~~~~lsd~ti~~vl~~l~evf~n 37 (200)
++|.|+... .....++++++..|-.+|..|..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~Ls~~e~~~V~~sW~~v~~~ 40 (193)
T 2dc3_A 4 MEKVPGEMEIERRERSEELSEAERKAVQAMWARLYAN 40 (193)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHTT
T ss_pred cccccCCCcccCCCCCCCCCHHHHHHHHHHHHHHHcC
Confidence 345554432 234678999999888888887555
No 39
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=23.98 E-value=2.2e+02 Score=24.68 Aligned_cols=80 Identities=11% Similarity=0.180 Sum_probs=50.5
Q ss_pred HHHhhhhhhhhccccccHHHHHHhhhhhhHH---------------HHHHHHHHHHHHh------hccCCcchhhhHhhh
Q psy15594 33 EVIKKNAEFSRNASSAGEYARKKLRECEGLI---------------DSLLYVVKSAIEK------SLLESGGVERLMNIT 91 (200)
Q Consensus 33 evf~natg~lRNlSsa~~~aRq~mR~c~gLI---------------dSl~~~i~~~v~~------~~~d~kgvEN~VcIl 91 (200)
++...+..++.|+++.....++.+.+. |+| ..+++.|.++... ...+.++++-++.++
T Consensus 146 ~v~~~A~~~L~~l~~~~~~~~~~~~~~-g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll 224 (530)
T 1wa5_B 146 MLQLEAAWALTNIASGTSAQTKVVVDA-DAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF 224 (530)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHT-TCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGG
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHC-CCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHh
Confidence 466677788888888776666655432 222 3445555555432 134567888888888
Q ss_pred cCCCCcchHHHHHHHHHHHHhhchh
Q psy15594 92 KQRQKYTPRVLKFAGQVLFTMWQHQ 116 (200)
Q Consensus 92 rnlS~~~~k~~kAAs~lL~smW~~k 116 (200)
.+ ..+...+.|...|.++-.+.
T Consensus 225 ~~---~~~~v~~~a~~~L~~L~~~~ 246 (530)
T 1wa5_B 225 NS---NKPSLIRTATWTLSNLCRGK 246 (530)
T ss_dssp GS---CCHHHHHHHHHHHHHHHCCS
T ss_pred cc---CCHHHHHHHHHHHHHHhCCC
Confidence 75 23556677777888877654
Done!