BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15596
(149 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4IFD2|FOXP1_BOVIN Forkhead box protein P1 OS=Bos taurus GN=FOXP1 PE=2 SV=1
Length = 674
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 67/82 (81%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCEAVCED Q+F KHLN EH LDDRSTAQ RVQMQVV QLELQL K++
Sbjct: 298 HPLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDK 357
Query: 121 DRLQAMMLHLHMTKQQSQTVEQ 142
+RLQAMM HLH+ + +T Q
Sbjct: 358 ERLQAMMTHLHVKSTEPKTAPQ 379
>sp|Q9H334|FOXP1_HUMAN Forkhead box protein P1 OS=Homo sapiens GN=FOXP1 PE=1 SV=1
Length = 677
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 66/82 (80%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCEAVCED Q+F KHLN EH LDDRSTAQ RVQMQVV QLELQL K++
Sbjct: 300 HPLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDK 359
Query: 121 DRLQAMMLHLHMTKQQSQTVEQ 142
+RLQAMM HLH+ + + Q
Sbjct: 360 ERLQAMMTHLHVKSTEPKAAPQ 381
>sp|Q58NQ4|FOXP1_CHICK Forkhead box protein P1 OS=Gallus gallus GN=FOXP1 PE=2 SV=1
Length = 686
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 66/82 (80%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCEAVCED Q+F KHLN EH LDDRSTAQ RVQMQVV QLELQL K++
Sbjct: 309 HPLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDK 368
Query: 121 DRLQAMMLHLHMTKQQSQTVEQ 142
+RLQAMM HLH+ + + Q
Sbjct: 369 ERLQAMMTHLHVKSTEPKATPQ 390
>sp|Q498D1|FOXP1_RAT Forkhead box protein P1 OS=Rattus norvegicus GN=Foxp1 PE=2 SV=1
Length = 711
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 65/82 (79%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCEAVC+D AF KHLN EH LDDRSTAQ RVQMQVV QLELQL K++
Sbjct: 334 HPLYGHGVCKWPGCEAVCDDFPAFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDK 393
Query: 121 DRLQAMMLHLHMTKQQSQTVEQ 142
+RLQAMM HLH+ + + Q
Sbjct: 394 ERLQAMMTHLHVKSTEPKAAPQ 415
>sp|P58462|FOXP1_MOUSE Forkhead box protein P1 OS=Mus musculus GN=Foxp1 PE=1 SV=1
Length = 705
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 65/82 (79%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCEAVC+D AF KHLN EH LDDRSTAQ RVQMQVV QLELQL K++
Sbjct: 328 HPLYGHGVCKWPGCEAVCDDFPAFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDK 387
Query: 121 DRLQAMMLHLHMTKQQSQTVEQ 142
+RLQAMM HLH+ + + Q
Sbjct: 388 ERLQAMMTHLHVKSTEPKAAPQ 409
>sp|P0CF24|FOXP2_RAT Forkhead box protein P2 OS=Rattus norvegicus GN=Foxp2 PE=3 SV=1
Length = 710
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 61/72 (84%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 335 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 394
Query: 121 DRLQAMMLHLHM 132
+RLQAMM HLHM
Sbjct: 395 ERLQAMMTHLHM 406
>sp|Q8MJ98|FOXP2_PONPY Forkhead box protein P2 OS=Pongo pygmaeus GN=FOXP2 PE=2 SV=3
Length = 713
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 61/72 (84%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 338 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 397
Query: 121 DRLQAMMLHLHM 132
+RLQAMM HLHM
Sbjct: 398 ERLQAMMTHLHM 409
>sp|O15409|FOXP2_HUMAN Forkhead box protein P2 OS=Homo sapiens GN=FOXP2 PE=1 SV=2
Length = 715
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 61/72 (84%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 340 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 399
Query: 121 DRLQAMMLHLHM 132
+RLQAMM HLHM
Sbjct: 400 ERLQAMMTHLHM 411
>sp|Q8MJA0|FOXP2_PANTR Forkhead box protein P2 OS=Pan troglodytes GN=FOXP2 PE=2 SV=1
Length = 716
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 61/72 (84%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 341 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 400
Query: 121 DRLQAMMLHLHM 132
+RLQAMM HLHM
Sbjct: 401 ERLQAMMTHLHM 412
>sp|Q8HZ00|FOXP2_PANPA Forkhead box protein P2 OS=Pan paniscus GN=FOXP2 PE=2 SV=1
Length = 716
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 61/72 (84%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 341 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 400
Query: 121 DRLQAMMLHLHM 132
+RLQAMM HLHM
Sbjct: 401 ERLQAMMTHLHM 412
>sp|Q8MJ97|FOXP2_MACMU Forkhead box protein P2 OS=Macaca mulatta GN=FOXP2 PE=2 SV=1
Length = 714
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 61/72 (84%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 339 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 398
Query: 121 DRLQAMMLHLHM 132
+RLQAMM HLHM
Sbjct: 399 ERLQAMMTHLHM 410
>sp|Q5QL03|FOXP2_HYLLA Forkhead box protein P2 OS=Hylobates lar GN=FOXP2 PE=3 SV=1
Length = 713
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 61/72 (84%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 338 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 397
Query: 121 DRLQAMMLHLHM 132
+RLQAMM HLHM
Sbjct: 398 ERLQAMMTHLHM 409
>sp|Q8MJ99|FOXP2_GORGO Forkhead box protein P2 OS=Gorilla gorilla gorilla GN=FOXP2 PE=2
SV=1
Length = 713
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 61/72 (84%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 338 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 397
Query: 121 DRLQAMMLHLHM 132
+RLQAMM HLHM
Sbjct: 398 ERLQAMMTHLHM 409
>sp|P58463|FOXP2_MOUSE Forkhead box protein P2 OS=Mus musculus GN=Foxp2 PE=1 SV=2
Length = 714
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 61/72 (84%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 339 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 398
Query: 121 DRLQAMMLHLHM 132
+RLQAMM HLHM
Sbjct: 399 ERLQAMMTHLHM 410
>sp|Q4VYR7|FOXP4_XENLA Forkhead box protein P4 OS=Xenopus laevis GN=foxp4 PE=2 SV=1
Length = 641
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 59/99 (59%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 46 NG-DDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARV 104
NG + ++ + S+ E H L+GHG C+WPGCEA+CED+ F KHLN EH LDDRSTAQ RV
Sbjct: 256 NGQNTRRESTSHYESSHLLYGHGECRWPGCEALCEDMGQFIKHLNTEHALDDRSTAQCRV 315
Query: 105 QMQVVSQLELQLQKERDRLQAMMLHLHMTKQQSQTVEQE 143
QMQVV QLE+QL KE +RLQAMM HLHM + + Q
Sbjct: 316 QMQVVQQLEIQLAKESERLQAMMTHLHMRPSEPKPFSQP 354
>sp|Q2LE08|FXP1B_DANRE Forkhead box protein P1-B OS=Danio rerio GN=foxp1b PE=2 SV=1
Length = 659
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 41 RREWMNGDDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTA 100
+RE DD ++ H L+GHGVCKWPGCEAV ED Q+F KHLN EH LDDRSTA
Sbjct: 269 KREGSTLDD------HSPHSHPLYGHGVCKWPGCEAVFEDFQSFLKHLNNEHALDDRSTA 322
Query: 101 QARVQMQVVSQLELQLQKERDRLQAMMLHLHMTKQQSQTVEQE 143
Q RVQMQVV QLELQL K+++RLQAMM HLH+ + + Q
Sbjct: 323 QCRVQMQVVQQLELQLAKDKERLQAMMTHLHVKSTEPKPTPQP 365
>sp|Q4VYS1|FOXP2_XENLA Forkhead box protein P2 OS=Xenopus laevis GN=foxp2 PE=2 SV=1
Length = 706
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 60/72 (83%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCE +CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 331 HTLYGHGVCKWPGCENICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 390
Query: 121 DRLQAMMLHLHM 132
+RLQAMM HLHM
Sbjct: 391 ERLQAMMTHLHM 402
>sp|Q5W1J5|FOXP1_XENLA Forkhead box protein P1 OS=Xenopus laevis GN=foxp1 PE=1 SV=1
Length = 578
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 64/82 (78%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHGVCKWPGCE +CED +F KHLN EH LDDRSTAQ RVQMQVV QLELQL K++
Sbjct: 202 HPLYGHGVCKWPGCETICEDFPSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLSKDK 261
Query: 121 DRLQAMMLHLHMTKQQSQTVEQ 142
+RLQAMM HLH+ + + Q
Sbjct: 262 ERLQAMMSHLHVKSTEPKASPQ 283
>sp|Q8IVH2|FOXP4_HUMAN Forkhead box protein P4 OS=Homo sapiens GN=FOXP4 PE=1 SV=1
Length = 680
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 62/83 (74%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHG CKWPGCE +CED+ F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KE
Sbjct: 301 HPLYGHGECKWPGCETLCEDLGQFIKHLNTEHALDDRSTAQCRVQMQVVQQLEIQLAKES 360
Query: 121 DRLQAMMLHLHMTKQQSQTVEQE 143
+RLQAMM HLHM + + Q
Sbjct: 361 ERLQAMMAHLHMRPSEPKPFSQP 383
>sp|Q9DBY0|FOXP4_MOUSE Forkhead box protein P4 OS=Mus musculus GN=Foxp4 PE=1 SV=1
Length = 795
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 62/83 (74%)
Query: 61 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 120
H L+GHG CKWPGCE +CED+ F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KE
Sbjct: 306 HPLYGHGECKWPGCETLCEDLGQFIKHLNTEHALDDRSTAQCRVQMQVVQQLEIQLAKES 365
Query: 121 DRLQAMMLHLHMTKQQSQTVEQE 143
+RLQAMM HLHM + + Q
Sbjct: 366 ERLQAMMAHLHMRPSEPKPFSQP 388
>sp|Q99JB6|FOXP3_MOUSE Forkhead box protein P3 OS=Mus musculus GN=Foxp3 PE=1 SV=1
Length = 429
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 14/113 (12%)
Query: 32 GLLVSMGISRREWMN------------GDDQKANESYAEK--VHFLFGHGVCKWPGCEAV 77
GL + ++ EW++ G +K + A + L +GVCKWPGCE V
Sbjct: 147 GLPPGINVASLEWVSREPALLCTFPRSGTPRKDSNLLAAPQGSYPLLANGVCKWPGCEKV 206
Query: 78 CEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAMMLHL 130
E+ + F KH +H LD++ AQ +Q +VV LE QL+ E+++L AM HL
Sbjct: 207 FEEPEEFLKHCQADHLLDEKGKAQCLLQREVVQSLEQQLELEKEKLGAMQAHL 259
>sp|Q9BZS1|FOXP3_HUMAN Forkhead box protein P3 OS=Homo sapiens GN=FOXP3 PE=1 SV=1
Length = 431
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 32 GLLVSMGISRREWMNGDDQK----ANESYAEK----------VHFLFGHGVCKWPGCEAV 77
GL + ++ EW++ + N S K + L +GVCKWPGCE V
Sbjct: 148 GLPPGINVASLEWVSREPALLCTFPNPSAPRKDSTLSAVPQSSYPLLANGVCKWPGCEKV 207
Query: 78 CEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAMMLHL 130
E+ + F KH +H LD++ AQ +Q ++V LE QL E+++L AM HL
Sbjct: 208 FEEPEDFLKHCQADHLLDEKGRAQCLLQREMVQSLEQQLVLEKEKLSAMQAHL 260
>sp|Q6U8D7|FOXP3_MACFA Forkhead box protein P3 OS=Macaca fascicularis GN=FOXP3 PE=2 SV=1
Length = 431
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 14/113 (12%)
Query: 32 GLLVSMGISRREWMN------------GDDQKAN--ESYAEKVHFLFGHGVCKWPGCEAV 77
GL + ++ EW++ G +K + + + + L +GVCKWPGCE V
Sbjct: 148 GLPPGINVASLEWVSREPALLCTFPNPGAPRKDSTLSAMPQSSYPLLANGVCKWPGCEKV 207
Query: 78 CEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAMMLHL 130
E+ + F KH +H LD++ AQ +Q ++V LE QL E+++L AM HL
Sbjct: 208 FEEPEDFLKHCQADHLLDEKGRAQCLLQREMVQSLEQQLVLEKEKLSAMQAHL 260
>sp|Q9C438|ATG11_PICPA Autophagy-related protein 11 (Fragment) OS=Komagataella pastoris
GN=ATG11 PE=3 SV=1
Length = 1313
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 90 KEHNLDDRSTAQARVQMQVVSQLELQLQKERD--RLQAMMLHLHMTKQQSQTVEQEK 144
K N+D+ Q R++ Q+ + LE Q KERD R Q +LHL + K+ + E EK
Sbjct: 817 KRENVDEIQVLQTRIE-QLQANLE-QTSKERDDEREQKEILHLKLMKRDEEGDEDEK 871
>sp|P10047|DCTB_RHILE C4-dicarboxylate transport sensor protein DctB OS=Rhizobium
leguminosarum GN=dctB PE=3 SV=1
Length = 622
Score = 32.0 bits (71), Expect = 1.5, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 98 STAQARVQMQV-VSQLELQLQKERDRLQAMMLHLHMTKQQSQTVEQE 143
S QAR +++ V + L L + RDRLQA ++ T+Q+ Q V+Q+
Sbjct: 350 SEQQAREELERRVVERTLDLSQARDRLQAEIIGHKSTEQKLQAVQQD 396
>sp|Q9C1A4|PACC_TRIRU pH-response transcription factor pacC/RIM101 OS=Trichophyton rubrum
GN=pacC PE=3 SV=2
Length = 758
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 69 CKWPGCEAVCEDVQAFYKHLNKEH 92
C+W GC+ +C +A Y+H+ + H
Sbjct: 86 CQWQGCQELCPTPEALYEHVCERH 109
>sp|Q9CR36|GKN1_MOUSE Gastrokine-1 OS=Mus musculus GN=Gkn1 PE=2 SV=2
Length = 201
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 17 HTSHAFKHTLFVKG-LGLLVSMGISRREWMNGDDQKANESYAEKVHFLFGHGV 68
HT A K T+FV G LGLL + G + +NG+D + S + V H V
Sbjct: 13 HTPAAMKLTMFVVGLLGLLAAPGFAYTVNINGNDGNVDGSGQQSVSINGVHNV 65
>sp|Q5XL24|PACC_ASPGI pH-response transcription factor pacC/RIM101 OS=Aspergillus
giganteus GN=pacC PE=3 SV=1
Length = 678
Score = 30.0 bits (66), Expect = 5.8, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 69 CKWPGCEAVCEDVQAFYKHLNKEH 92
C W GC C +A Y+H+ + H
Sbjct: 85 CLWQGCSEKCSSAEALYEHICERH 108
>sp|Q4L506|MECA_STAHJ Adapter protein MecA OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=mecA PE=3 SV=1
Length = 240
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 16 WHTSHAFKHTLFVKGLGLLVSMGISRREWMNGDDQKANESYAEKVHFLFGHGVCKWPGCE 75
W HAF+ KG+ + +S E MN D+ ANE + E+V+ L + + E
Sbjct: 61 WIQVHAFE-----KGVEVTISKS-KNEEAMNMSDEDANEQFEEQVNELLANTLENEESIE 114
Query: 76 AVCE 79
+ E
Sbjct: 115 DLFE 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.130 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,265,175
Number of Sequences: 539616
Number of extensions: 1935105
Number of successful extensions: 7298
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 6924
Number of HSP's gapped (non-prelim): 415
length of query: 149
length of database: 191,569,459
effective HSP length: 107
effective length of query: 42
effective length of database: 133,830,547
effective search space: 5620882974
effective search space used: 5620882974
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)