RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15596
         (149 letters)



>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse
           (Mus musculus) [TaxId: 10090]}
          Length = 121

 Score = 29.0 bits (65), Expect = 0.12
 Identities = 5/28 (17%), Positives = 10/28 (35%)

Query: 74  CEAVCEDVQAFYKHLNKEHNLDDRSTAQ 101
           C+ +    +  + H   EH  +  S   
Sbjct: 21  CDRLFASAEETFSHCKLEHQFNIDSMVH 48


>d1iwea_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Mouse
           (Mus musculus) [TaxId: 10090]}
          Length = 430

 Score = 26.2 bits (57), Expect = 1.8
 Identities = 12/88 (13%), Positives = 21/88 (23%)

Query: 5   HITSHVMGSRDWHTSHAFKHTLFVKGLGLLVSMGISRREWMNGDDQKANESYAEKVHFLF 64
           H     +                 KG+G   S   +R      D     + ++ +   L 
Sbjct: 114 HQAVDGLQEVQRQAQEGKNIGTTKKGIGPTYSSKAARTGLRICDLLSDFDEFSARFKNLA 173

Query: 65  GHGVCKWPGCEAVCEDVQAFYKHLNKEH 92
                 +P  E   E      K   +  
Sbjct: 174 HQHQSMFPTLEIDVEGQLKRLKGFAERI 201


>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus
           norvegicus) [TaxId: 10116]}
          Length = 124

 Score = 23.5 bits (50), Expect = 9.3
 Identities = 5/38 (13%), Positives = 18/38 (47%)

Query: 101 QARVQMQVVSQLELQLQKERDRLQAMMLHLHMTKQQSQ 138
           +  +  +V+++ E     E++R+  ++  L   ++   
Sbjct: 7   EKEIINRVIARAEKMETMEQERIGRLVDRLETMRKNVA 44


>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
           {Escherichia coli [TaxId: 562]}
          Length = 327

 Score = 24.0 bits (51), Expect = 9.9
 Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 5/75 (6%)

Query: 73  GCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAMMLHLHM 132
           G + +   +  F   L     L      Q+   ++   Q E ++    + L A       
Sbjct: 245 GIDEIWHAIIDFKTALTASGRLQQVRQQQSVEWLR--KQTEEEV---LNHLFANEDFDRY 299

Query: 133 TKQQSQTVEQEKQTP 147
            +Q    V+    +P
Sbjct: 300 YRQTLLAVKNNTLSP 314


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.130    0.396 

Gapped
Lambda     K      H
   0.267   0.0620    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 508,448
Number of extensions: 20023
Number of successful extensions: 51
Number of sequences better than 10.0: 1
Number of HSP's gapped: 51
Number of HSP's successfully gapped: 12
Length of query: 149
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 72
Effective length of database: 1,350,386
Effective search space: 97227792
Effective search space used: 97227792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (22.9 bits)