BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15597
(204 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q58NQ4|FOXP1_CHICK Forkhead box protein P1 OS=Gallus gallus GN=FOXP1 PE=2 SV=1
Length = 686
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 33/167 (19%)
Query: 62 TSRPGQPMM----MPSGVNQSDINSLW--------------NNFS---MENQDVSIPAGD 100
T +PGQP + + G+ +++ LW NN S + VS A
Sbjct: 215 TIQPGQPTLPLQPLAQGMIPTELQQLWKEVTSSHTAEEAASNNHSSLDLSTTCVSSSAPS 274
Query: 101 KSMFGINGLLVSMG-----ISRREWMNGDDQKANESYAEKVHFLFGHGVCKWPGCEAVCE 155
K+ IN + G +RE ++ ++ + H L+GHGVCKWPGCEAVCE
Sbjct: 275 KTSLIINPHASTNGQLSVHTPKRESLSHEEHSHS-------HPLYGHGVCKWPGCEAVCE 327
Query: 156 DVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
D Q+F KHLN EH LDDRSTAQ RVQMQVV QLELQL K+++RLQA+
Sbjct: 328 DFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAM 374
>sp|Q9H334|FOXP1_HUMAN Forkhead box protein P1 OS=Homo sapiens GN=FOXP1 PE=1 SV=1
Length = 677
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 58/66 (87%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHGVCKWPGCEAVCED Q+F KHLN EH LDDRSTAQ RVQMQVV QLELQL K++
Sbjct: 300 HPLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDK 359
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 360 ERLQAM 365
>sp|A4IFD2|FOXP1_BOVIN Forkhead box protein P1 OS=Bos taurus GN=FOXP1 PE=2 SV=1
Length = 674
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 58/66 (87%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHGVCKWPGCEAVCED Q+F KHLN EH LDDRSTAQ RVQMQVV QLELQL K++
Sbjct: 298 HPLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDK 357
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 358 ERLQAM 363
>sp|Q498D1|FOXP1_RAT Forkhead box protein P1 OS=Rattus norvegicus GN=Foxp1 PE=2 SV=1
Length = 711
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 89/160 (55%), Gaps = 19/160 (11%)
Query: 62 TSRPGQPMM----MPSGVNQSDINSLWNNFSMENQDVSIPAGDKSMFGINGLLVSMGISR 117
T +PGQP + + G+ +++ LW + + + S + VS
Sbjct: 240 TIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHTAEETTGSNHSSLDLTSTCVSSSAPS 299
Query: 118 REWM--------NG-----DDQKANESYAEKVHF--LFGHGVCKWPGCEAVCEDVQAFYK 162
+ + NG ++ + S+ E H L+GHGVCKWPGCEAVC+D AF K
Sbjct: 300 KTSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSHPLYGHGVCKWPGCEAVCDDFPAFLK 359
Query: 163 HLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
HLN EH LDDRSTAQ RVQMQVV QLELQL K+++RLQA+
Sbjct: 360 HLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAM 399
>sp|P58462|FOXP1_MOUSE Forkhead box protein P1 OS=Mus musculus GN=Foxp1 PE=1 SV=1
Length = 705
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 57/66 (86%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHGVCKWPGCEAVC+D AF KHLN EH LDDRSTAQ RVQMQVV QLELQL K++
Sbjct: 328 HPLYGHGVCKWPGCEAVCDDFPAFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDK 387
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 388 ERLQAM 393
>sp|Q2LE08|FXP1B_DANRE Forkhead box protein P1-B OS=Danio rerio GN=foxp1b PE=2 SV=1
Length = 659
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 69/97 (71%), Gaps = 7/97 (7%)
Query: 106 INGLLVSMGISRREWMNGDDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLN 165
NG +S + +RE DD ++ H L+GHGVCKWPGCEAV ED Q+F KHLN
Sbjct: 259 TNGQYISHSL-KREGSTLDD------HSPHSHPLYGHGVCKWPGCEAVFEDFQSFLKHLN 311
Query: 166 KEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
EH LDDRSTAQ RVQMQVV QLELQL K+++RLQA+
Sbjct: 312 NEHALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAM 348
>sp|P58463|FOXP2_MOUSE Forkhead box protein P2 OS=Mus musculus GN=Foxp2 PE=1 SV=2
Length = 714
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 56/66 (84%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 339 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 398
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 399 ERLQAM 404
>sp|P0CF24|FOXP2_RAT Forkhead box protein P2 OS=Rattus norvegicus GN=Foxp2 PE=3 SV=1
Length = 710
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 56/66 (84%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 335 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 394
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 395 ERLQAM 400
>sp|Q8MJ98|FOXP2_PONPY Forkhead box protein P2 OS=Pongo pygmaeus GN=FOXP2 PE=2 SV=3
Length = 713
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 56/66 (84%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 338 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 397
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 398 ERLQAM 403
>sp|O15409|FOXP2_HUMAN Forkhead box protein P2 OS=Homo sapiens GN=FOXP2 PE=1 SV=2
Length = 715
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 56/66 (84%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 340 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 399
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 400 ERLQAM 405
>sp|Q8MJA0|FOXP2_PANTR Forkhead box protein P2 OS=Pan troglodytes GN=FOXP2 PE=2 SV=1
Length = 716
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 56/66 (84%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 341 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 400
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 401 ERLQAM 406
>sp|Q8HZ00|FOXP2_PANPA Forkhead box protein P2 OS=Pan paniscus GN=FOXP2 PE=2 SV=1
Length = 716
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 56/66 (84%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 341 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 400
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 401 ERLQAM 406
>sp|Q8MJ97|FOXP2_MACMU Forkhead box protein P2 OS=Macaca mulatta GN=FOXP2 PE=2 SV=1
Length = 714
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 56/66 (84%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 339 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 398
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 399 ERLQAM 404
>sp|Q5QL03|FOXP2_HYLLA Forkhead box protein P2 OS=Hylobates lar GN=FOXP2 PE=3 SV=1
Length = 713
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 56/66 (84%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 338 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 397
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 398 ERLQAM 403
>sp|Q8MJ99|FOXP2_GORGO Forkhead box protein P2 OS=Gorilla gorilla gorilla GN=FOXP2 PE=2
SV=1
Length = 713
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 56/66 (84%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHGVCKWPGCE++CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 338 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 397
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 398 ERLQAM 403
>sp|Q5W1J5|FOXP1_XENLA Forkhead box protein P1 OS=Xenopus laevis GN=foxp1 PE=1 SV=1
Length = 578
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 90/159 (56%), Gaps = 21/159 (13%)
Query: 64 RPGQPMM----MPSGVNQSDINSLWNNFSMENQDVSIPAGDKSMFGINGLLVS------- 112
+PGQP + + G+ +++ LW + + + + S ++ VS
Sbjct: 110 QPGQPTLPLQSLAQGMIPAELQQLWKEVTGSHTADDVVCNNHSTLDLSTTCVSSTAQPKT 169
Query: 113 -MGISRREWMNGD--------DQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKH 163
+ ++ + NG + ++E Y H L+GHGVCKWPGCE +CED +F KH
Sbjct: 170 SLLLNSQASTNGQASVLTLKRESSSHEEYTHN-HPLYGHGVCKWPGCETICEDFPSFLKH 228
Query: 164 LNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
LN EH LDDRSTAQ RVQMQVV QLELQL K+++RLQA+
Sbjct: 229 LNSEHALDDRSTAQCRVQMQVVQQLELQLSKDKERLQAM 267
>sp|Q4VYR7|FOXP4_XENLA Forkhead box protein P4 OS=Xenopus laevis GN=foxp4 PE=2 SV=1
Length = 641
Score = 117 bits (292), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
Query: 122 NG-DDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARV 180
NG + ++ + S+ E H L+GHG C+WPGCEA+CED+ F KHLN EH LDDRSTAQ RV
Sbjct: 256 NGQNTRRESTSHYESSHLLYGHGECRWPGCEALCEDMGQFIKHLNTEHALDDRSTAQCRV 315
Query: 181 QMQVVSQLELQLQKERDRLQAL 202
QMQVV QLE+QL KE +RLQA+
Sbjct: 316 QMQVVQQLEIQLAKESERLQAM 337
>sp|Q4VYS1|FOXP2_XENLA Forkhead box protein P2 OS=Xenopus laevis GN=foxp2 PE=2 SV=1
Length = 706
Score = 116 bits (291), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 55/66 (83%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHGVCKWPGCE +CED F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 331 HTLYGHGVCKWPGCENICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 390
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 391 ERLQAM 396
>sp|Q8IVH2|FOXP4_HUMAN Forkhead box protein P4 OS=Homo sapiens GN=FOXP4 PE=1 SV=1
Length = 680
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 54/66 (81%)
Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
H L+GHG CKWPGCE +CED+ F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KE
Sbjct: 301 HPLYGHGECKWPGCETLCEDLGQFIKHLNTEHALDDRSTAQCRVQMQVVQQLEIQLAKES 360
Query: 197 DRLQAL 202
+RLQA+
Sbjct: 361 ERLQAM 366
>sp|Q9DBY0|FOXP4_MOUSE Forkhead box protein P4 OS=Mus musculus GN=Foxp4 PE=1 SV=1
Length = 795
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 82/150 (54%), Gaps = 19/150 (12%)
Query: 71 MPSGVNQSDINSLWNNFSMENQ-----------DVSIPAGDKSMFGINGLLVSMGISRRE 119
+P V +D+ LW Q D++ A + F + VS +S
Sbjct: 223 LPQAVCPTDLPQLWKGEGAPGQPAEDSGRQEGLDLASTAVTATSFA-SPPKVSPPLSHHP 281
Query: 120 WMNG-----DDQKANESYAEKV--HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDD 172
NG ++ + S+ E H L+GHG CKWPGCE +CED+ F KHLN EH LDD
Sbjct: 282 LPNGQPTVLTSRRDSSSHEETPSSHPLYGHGECKWPGCETLCEDLGQFIKHLNTEHALDD 341
Query: 173 RSTAQARVQMQVVSQLELQLQKERDRLQAL 202
RSTAQ RVQMQVV QLE+QL KE +RLQA+
Sbjct: 342 RSTAQCRVQMQVVQQLEIQLAKESERLQAM 371
>sp|Q99JB6|FOXP3_MOUSE Forkhead box protein P3 OS=Mus musculus GN=Foxp3 PE=1 SV=1
Length = 429
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 17/128 (13%)
Query: 93 DVSIPAGDKSMFGIN---GLLVSMGISRREWMN------------GDDQKANESYAEK-- 135
+ P+ +F + GL + ++ EW++ G +K + A
Sbjct: 129 SLPPPSAATGVFSLKARPGLPPGINVASLEWVSREPALLCTFPRSGTPRKDSNLLAAPQG 188
Query: 136 VHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKE 195
+ L +GVCKWPGCE V E+ + F KH +H LD++ AQ +Q +VV LE QL+ E
Sbjct: 189 SYPLLANGVCKWPGCEKVFEEPEEFLKHCQADHLLDEKGKAQCLLQREVVQSLEQQLELE 248
Query: 196 RDRLQALK 203
+++L A++
Sbjct: 249 KEKLGAMQ 256
>sp|Q6U8D7|FOXP3_MACFA Forkhead box protein P3 OS=Macaca fascicularis GN=FOXP3 PE=2 SV=1
Length = 431
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 139 LFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDR 198
L +GVCKWPGCE V E+ + F KH +H LD++ AQ +Q ++V LE QL E+++
Sbjct: 193 LLANGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQREMVQSLEQQLVLEKEK 252
Query: 199 LQALK 203
L A++
Sbjct: 253 LSAMQ 257
>sp|Q9BZS1|FOXP3_HUMAN Forkhead box protein P3 OS=Homo sapiens GN=FOXP3 PE=1 SV=1
Length = 431
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 139 LFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDR 198
L +GVCKWPGCE V E+ + F KH +H LD++ AQ +Q ++V LE QL E+++
Sbjct: 193 LLANGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQREMVQSLEQQLVLEKEK 252
Query: 199 LQALK 203
L A++
Sbjct: 253 LSAMQ 257
>sp|Q9C1A4|PACC_TRIRU pH-response transcription factor pacC/RIM101 OS=Trichophyton rubrum
GN=pacC PE=3 SV=2
Length = 758
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 145 CKWPGCEAVCEDVQAFYKHLNKEH 168
C+W GC+ +C +A Y+H+ + H
Sbjct: 86 CQWQGCQELCPTPEALYEHVCERH 109
>sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9
PE=1 SV=2
Length = 2897
Score = 30.4 bits (67), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 35 NQLIHQLEMTQRKYVLQHAIGLQS-QASTSRPGQPMMMPSGVNQSDINSLWNNFSMENQD 93
N L+ +++T + + Q+ LQS Q + G P +PSG ++ ++ F M
Sbjct: 2661 NGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPTGLPSGGEAKNMAAM---FPML--- 2714
Query: 94 VSIPAGDKSMFGINGLLVSMGISRREWMNGDDQKANESYAEKV 136
+S AG ++ G+ GLL S E G D K +E E+
Sbjct: 2715 LSGMAGLPNLLGMGGLLTKPTESGTEDKKGSDSKESEGKTERT 2757
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.129 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,389,301
Number of Sequences: 539616
Number of extensions: 2671103
Number of successful extensions: 7178
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 7134
Number of HSP's gapped (non-prelim): 44
length of query: 204
length of database: 191,569,459
effective HSP length: 112
effective length of query: 92
effective length of database: 131,132,467
effective search space: 12064186964
effective search space used: 12064186964
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)