Query psy15602
Match_columns 72
No_of_seqs 61 out of 63
Neff 2.5
Searched_HMMs 29240
Date Fri Aug 16 16:53:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15602.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15602hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l6x_A Catenin delta-1; cateni 98.0 4E-06 1.4E-10 66.1 3.3 50 2-69 367-416 (584)
2 1xm9_A Plakophilin 1; armadill 97.5 0.00017 5.8E-09 52.4 5.5 43 2-62 343-385 (457)
3 3tt9_A Plakophilin-2; cell adh 93.1 0.098 3.4E-06 36.6 3.9 37 3-57 108-144 (233)
4 3tt9_A Plakophilin-2; cell adh 90.1 0.35 1.2E-05 33.8 4.1 28 2-29 64-92 (233)
5 1xm9_A Plakophilin 1; armadill 88.5 0.57 1.9E-05 33.8 4.3 27 2-28 56-83 (457)
6 3nmw_A APC variant protein; AR 88.1 0.45 1.5E-05 34.4 3.6 29 3-31 45-73 (354)
7 3l6x_A Catenin delta-1; cateni 82.0 1.7 5.8E-05 34.3 4.5 24 4-27 148-171 (584)
8 3nmw_A APC variant protein; AR 81.5 2.9 0.0001 30.1 5.3 25 3-27 184-209 (354)
9 3nmz_A APC variant protein; pr 76.7 1.7 5.7E-05 32.9 2.8 27 3-29 161-187 (458)
10 4db8_A Armadillo-repeat protei 73.4 6.1 0.00021 24.6 4.4 26 2-27 108-134 (252)
11 2z6h_A Catenin beta-1, beta-ca 72.1 5.8 0.0002 29.4 4.7 26 3-28 429-454 (644)
12 4hxt_A De novo protein OR329; 70.6 10 0.00036 23.1 4.9 26 2-27 98-124 (252)
13 3nmz_A APC variant protein; pr 70.1 8.8 0.0003 28.9 5.4 25 3-27 300-325 (458)
14 4db6_A Armadillo repeat protei 69.5 12 0.00041 22.7 5.0 26 2-27 24-50 (210)
15 1jdh_A Beta-catenin; beta-cate 69.4 9.8 0.00034 26.2 5.1 26 3-28 73-98 (529)
16 4db6_A Armadillo repeat protei 67.1 13 0.00043 22.6 4.8 25 3-27 151-176 (210)
17 4hxt_A De novo protein OR329; 65.8 16 0.00054 22.3 5.0 26 3-28 57-83 (252)
18 4gmo_A Putative uncharacterize 65.4 3.8 0.00013 31.6 2.6 19 3-21 89-107 (684)
19 4db8_A Armadillo-repeat protei 63.5 14 0.00046 23.0 4.5 26 3-28 67-93 (252)
20 3ul1_B Importin subunit alpha- 61.7 14 0.00048 26.8 4.9 26 2-27 155-181 (510)
21 2z6h_A Catenin beta-1, beta-ca 61.2 14 0.00048 27.3 4.9 26 3-28 70-95 (644)
22 2z6g_A B-catenin; FULL-length, 60.4 10 0.00035 29.5 4.2 25 4-28 566-590 (780)
23 1jdh_A Beta-catenin; beta-cate 57.7 12 0.00039 25.9 3.7 42 2-43 472-513 (529)
24 2z6g_A B-catenin; FULL-length, 55.6 20 0.0007 27.8 5.1 26 3-28 206-231 (780)
25 3tpo_A Importin subunit alpha- 54.9 19 0.00063 26.1 4.5 27 2-28 174-201 (529)
26 3ul1_B Importin subunit alpha- 50.4 29 0.00098 25.1 4.9 37 3-39 114-151 (510)
27 3now_A UNC-45 protein, SD10334 40.6 26 0.00089 28.8 3.8 37 3-39 508-544 (810)
28 4b8j_A Importin subunit alpha- 36.4 59 0.002 22.8 4.6 25 3-27 173-198 (528)
29 1z2z_A Probable tRNA pseudouri 32.3 8.1 0.00028 29.2 -0.4 20 37-56 410-432 (446)
30 3f5h_A Type I polyketide synth 32.3 21 0.00072 21.6 1.6 14 11-24 18-31 (68)
31 2jdq_A Importin alpha-1 subuni 32.3 80 0.0028 21.0 4.6 18 3-20 331-348 (450)
32 1szw_A TRNA pseudouridine synt 29.2 3.1 0.0001 31.6 -3.2 20 37-56 340-362 (379)
33 2gyq_A YCFI, putative structur 29.1 1.3E+02 0.0045 20.1 5.3 46 10-55 31-89 (173)
34 2kk1_A Tyrosine-protein kinase 25.5 16 0.00053 25.3 0.1 24 37-60 76-99 (135)
35 2gs4_A Protein YCIF; stress pr 23.6 1.5E+02 0.0052 19.6 4.8 47 10-56 24-84 (166)
36 3tpo_A Importin subunit alpha- 22.9 1.2E+02 0.0043 21.7 4.5 40 3-42 133-173 (529)
37 1wa5_B Importin alpha subunit; 22.0 1.8E+02 0.0061 20.5 5.0 18 3-20 396-413 (530)
38 3now_A UNC-45 protein, SD10334 21.6 65 0.0022 26.5 3.0 26 3-28 392-417 (810)
39 3opb_A SWI5-dependent HO expre 20.8 1.6E+02 0.0056 24.5 5.3 53 3-55 470-527 (778)
No 1
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=97.96 E-value=4e-06 Score=66.11 Aligned_cols=50 Identities=56% Similarity=0.742 Sum_probs=43.0
Q ss_pred CchHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhCCCCchhhhHHHHhhhCCCCCCCCCCCCC
Q psy15602 2 EVDRVVCAAATALRNLAIDQRNKELIDAFEANLILIELNLSPPAGKYAMRDLVQKLPSGNAQHDQGTS 69 (72)
Q Consensus 2 ~~drVv~a~ataLRNLAlD~RNKeLI~~~~~~~~~~~~~~~~~~GkyAmrdLV~kLP~~~~~~~~~ls 69 (72)
++++|+++++.|||||+.++.|++.| ++++++.||+.|++++.++.+.++
T Consensus 367 ~~~~v~~~A~~aL~nLs~~~~~~~~I------------------~~g~ip~LV~LL~~~~~~~~~~~s 416 (584)
T 3l6x_A 367 EHERVVKAASGALRNLAVDARNKELI------------------GKHAIPNLVKNLPGGQQNSSWNFS 416 (584)
T ss_dssp SCHHHHHHHHHHHHHHHTTCSCHHHH------------------HHHHHHHHHHTSSSSSCSGGGTCC
T ss_pred CCHHHHHHHHHHHHHHhCChhHHHHH------------------HhCCHHHHHHHhcCCcccccccch
Confidence 56899999999999999999999999 999999999999998654333333
No 2
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=97.49 E-value=0.00017 Score=52.36 Aligned_cols=43 Identities=19% Similarity=0.248 Sum_probs=39.7
Q ss_pred CchHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhCCCCchhhhHHHHhhhCCCCCC
Q psy15602 2 EVDRVVCAAATALRNLAIDQRNKELIDAFEANLILIELNLSPPAGKYAMRDLVQKLPSGNA 62 (72)
Q Consensus 2 ~~drVv~a~ataLRNLAlD~RNKeLI~~~~~~~~~~~~~~~~~~GkyAmrdLV~kLP~~~~ 62 (72)
++++|.+.++.+|+||+.|++++++| ++++++.||+.|.++++
T Consensus 343 ~~~~v~~~A~~aL~nls~~~~~~~~i------------------~~~~i~~Lv~lL~~~~~ 385 (457)
T 1xm9_A 343 GNSDVVRSGASLLSNMSRHPLLHRVM------------------GNQVFPEVTRLLTSHTG 385 (457)
T ss_dssp SCHHHHHHHHHHHHHHHTSGGGHHHH------------------HHHTHHHHHHTTTSCCS
T ss_pred CCHhHHHHHHHHHHHHhcCHHHHHHH------------------HHhhhHHHHHhccCCCC
Confidence 56889999999999999999999999 89999999999998755
No 3
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=93.07 E-value=0.098 Score=36.56 Aligned_cols=37 Identities=19% Similarity=0.132 Sum_probs=30.9
Q ss_pred chHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhCCCCchhhhHHHHhhhC
Q psy15602 3 VDRVVCAAATALRNLAIDQRNKELIDAFEANLILIELNLSPPAGKYAMRDLVQKL 57 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD~RNKeLI~~~~~~~~~~~~~~~~~~GkyAmrdLV~kL 57 (72)
+..+...++++|.|||....||..| .+.++.-||+.+
T Consensus 108 ~~~~~e~a~~aL~nLS~~~~~k~~i------------------~~~~i~~Lv~ll 144 (233)
T 3tt9_A 108 DLETKKQITGLLWNLSSNDKLKNLM------------------ITEALLTLTENI 144 (233)
T ss_dssp CHHHHHHHHHHHHHHHTSGGGHHHH------------------HHHHHHHHCCCC
T ss_pred CHHHHHHHHHHHHHHHcChhhHHHH------------------HhccHHHHHHHH
Confidence 3456777889999999999999999 777888887765
No 4
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=90.15 E-value=0.35 Score=33.75 Aligned_cols=28 Identities=32% Similarity=0.368 Sum_probs=23.6
Q ss_pred CchHHHHHHHHHHHhhhhh-hhhHHHHHH
Q psy15602 2 EVDRVVCAAATALRNLAID-QRNKELIDA 29 (72)
Q Consensus 2 ~~drVv~a~ataLRNLAlD-~RNKeLI~~ 29 (72)
+++.+.+.++.|||||+.+ ..||..|.+
T Consensus 64 ~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~ 92 (233)
T 3tt9_A 64 QNEDVQRAVCGALRNLVFEDNDNKLEVAE 92 (233)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4567889999999999994 889998854
No 5
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=88.48 E-value=0.57 Score=33.85 Aligned_cols=27 Identities=41% Similarity=0.299 Sum_probs=23.3
Q ss_pred CchHHHHHHHHHHHhhhhh-hhhHHHHH
Q psy15602 2 EVDRVVCAAATALRNLAID-QRNKELID 28 (72)
Q Consensus 2 ~~drVv~a~ataLRNLAlD-~RNKeLI~ 28 (72)
++..+...++.+||||+.+ ..||..|.
T Consensus 56 ~~~~~~~~A~~aL~nLa~~~~~~k~~i~ 83 (457)
T 1xm9_A 56 PNQNVQQAAAGALRNLVFRSTTNKLETR 83 (457)
T ss_dssp SCHHHHHHHHHHHHHHHSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 3567888999999999998 99999984
No 6
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=88.12 E-value=0.45 Score=34.41 Aligned_cols=29 Identities=21% Similarity=0.543 Sum_probs=24.9
Q ss_pred chHHHHHHHHHHHhhhhhhhhHHHHHHHH
Q psy15602 3 VDRVVCAAATALRNLAIDQRNKELIDAFE 31 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD~RNKeLI~~~~ 31 (72)
+++.+|.++.||.|+|.|+.|+..|.+.-
T Consensus 45 ~~~~~~~A~~aL~nls~d~e~R~~i~~~G 73 (354)
T 3nmw_A 45 VEHQICPAVCVLMKLSFDEEHRHAMNELG 73 (354)
T ss_dssp GGGTHHHHHHHHHHHHTSHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHcC
Confidence 56788999999999999999999886543
No 7
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=81.99 E-value=1.7 Score=34.28 Aligned_cols=24 Identities=21% Similarity=0.073 Sum_probs=21.1
Q ss_pred hHHHHHHHHHHHhhhhhhhhHHHH
Q psy15602 4 DRVVCAAATALRNLAIDQRNKELI 27 (72)
Q Consensus 4 drVv~a~ataLRNLAlD~RNKeLI 27 (72)
..+...++.+|.|||.+..||..|
T Consensus 148 ~~~~e~aa~aL~nLS~~~~~k~~I 171 (584)
T 3l6x_A 148 MDLTEVITGTLWNLSSHDSIKMEI 171 (584)
T ss_dssp HHHHHHHHHHHHHHTTSGGGHHHH
T ss_pred HHHHHHHHHHHHHHhCCchhhHHH
Confidence 356677888999999999999999
No 8
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=81.52 E-value=2.9 Score=30.11 Aligned_cols=25 Identities=28% Similarity=0.247 Sum_probs=21.1
Q ss_pred chHHHHHHHHHHHhhhh-hhhhHHHH
Q psy15602 3 VDRVVCAAATALRNLAI-DQRNKELI 27 (72)
Q Consensus 3 ~drVv~a~ataLRNLAl-D~RNKeLI 27 (72)
++.+.+.++.+|+|||. ...||..|
T Consensus 184 ~~~~~~~A~~aL~nLs~~~~~nk~~i 209 (354)
T 3nmw_A 184 KESTLKSVLSALWNLSAHCTENKADI 209 (354)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHccChhhhHHH
Confidence 45678889999999999 66888888
No 9
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=76.68 E-value=1.7 Score=32.89 Aligned_cols=27 Identities=22% Similarity=0.569 Sum_probs=23.0
Q ss_pred chHHHHHHHHHHHhhhhhhhhHHHHHH
Q psy15602 3 VDRVVCAAATALRNLAIDQRNKELIDA 29 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD~RNKeLI~~ 29 (72)
.++..|.++.||.|+|.|..|+..|.+
T Consensus 161 ~~~~~~qAv~aL~nls~~~e~R~~i~~ 187 (458)
T 3nmz_A 161 VEHQICPAVCVLMKLSFDEEHRHAMNE 187 (458)
T ss_dssp CTTTTHHHHHHHHHHTTSHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 345678999999999999999998854
No 10
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=73.40 E-value=6.1 Score=24.64 Aligned_cols=26 Identities=19% Similarity=0.265 Sum_probs=21.5
Q ss_pred CchHHHHHHHHHHHhhhhhhhhH-HHH
Q psy15602 2 EVDRVVCAAATALRNLAIDQRNK-ELI 27 (72)
Q Consensus 2 ~~drVv~a~ataLRNLAlD~RNK-eLI 27 (72)
+++.+...++.+|.||+.+..++ +.+
T Consensus 108 ~~~~v~~~a~~~L~~l~~~~~~~~~~~ 134 (252)
T 4db8_A 108 PNEQILQEALWALSNIASGGNEQIQAV 134 (252)
T ss_dssp SCHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhcCCchHHHHH
Confidence 35678889999999999998888 555
No 11
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=72.07 E-value=5.8 Score=29.37 Aligned_cols=26 Identities=31% Similarity=0.386 Sum_probs=22.6
Q ss_pred chHHHHHHHHHHHhhhhhhhhHHHHH
Q psy15602 3 VDRVVCAAATALRNLAIDQRNKELID 28 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD~RNKeLI~ 28 (72)
.+.++.+++.+|+||+.+..|+..|.
T Consensus 429 ~~~v~~~a~~aL~~La~~~~~~~~l~ 454 (644)
T 2z6h_A 429 MEEIVEGCTGALHILARDVHNRIVIR 454 (644)
T ss_dssp HHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 46788899999999999999988884
No 12
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=70.64 E-value=10 Score=23.10 Aligned_cols=26 Identities=31% Similarity=0.183 Sum_probs=20.9
Q ss_pred CchHHHHHHHHHHHhhh-hhhhhHHHH
Q psy15602 2 EVDRVVCAAATALRNLA-IDQRNKELI 27 (72)
Q Consensus 2 ~~drVv~a~ataLRNLA-lD~RNKeLI 27 (72)
+++.+...++.+|.||+ .+..+++.+
T Consensus 98 ~~~~v~~~a~~~L~~l~~~~~~~~~~~ 124 (252)
T 4hxt_A 98 TDSEVQKEAARALANIASGPDEAIKAI 124 (252)
T ss_dssp SSHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 35678889999999999 567777766
No 13
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=70.09 E-value=8.8 Score=28.93 Aligned_cols=25 Identities=28% Similarity=0.247 Sum_probs=21.4
Q ss_pred chHHHHHHHHHHHhhhh-hhhhHHHH
Q psy15602 3 VDRVVCAAATALRNLAI-DQRNKELI 27 (72)
Q Consensus 3 ~drVv~a~ataLRNLAl-D~RNKeLI 27 (72)
++.+.+.++.+|+||+. ...||..|
T Consensus 300 ~~~v~~~A~~aL~nLs~~~~~nk~~I 325 (458)
T 3nmz_A 300 KESTLKSVLSALWNLSAHCTENKADI 325 (458)
T ss_dssp SHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHccCCHHHHHHH
Confidence 45788889999999999 66888888
No 14
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=69.54 E-value=12 Score=22.71 Aligned_cols=26 Identities=12% Similarity=0.089 Sum_probs=19.7
Q ss_pred CchHHHHHHHHHHHhhh-hhhhhHHHH
Q psy15602 2 EVDRVVCAAATALRNLA-IDQRNKELI 27 (72)
Q Consensus 2 ~~drVv~a~ataLRNLA-lD~RNKeLI 27 (72)
++..+...++.+|+|++ -+..+++.+
T Consensus 24 ~~~~v~~~a~~~L~~l~~~~~~~~~~i 50 (210)
T 4db6_A 24 PDQQELQSALRKLSQIASGGNEQIQAV 50 (210)
T ss_dssp SCHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 35677788999999999 456666655
No 15
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=69.45 E-value=9.8 Score=26.22 Aligned_cols=26 Identities=19% Similarity=0.040 Sum_probs=22.0
Q ss_pred chHHHHHHHHHHHhhhhhhhhHHHHH
Q psy15602 3 VDRVVCAAATALRNLAIDQRNKELID 28 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD~RNKeLI~ 28 (72)
+..+.+.++.+|+||+.+..|++.|.
T Consensus 73 ~~~~~~~a~~~L~~ls~~~~~~~~i~ 98 (529)
T 1jdh_A 73 DVETARCTAGTLHNLSHHREGLLAIF 98 (529)
T ss_dssp CHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCchhHHHHH
Confidence 44677889999999999998998884
No 16
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=67.14 E-value=13 Score=22.59 Aligned_cols=25 Identities=24% Similarity=0.326 Sum_probs=20.1
Q ss_pred chHHHHHHHHHHHhhhhh-hhhHHHH
Q psy15602 3 VDRVVCAAATALRNLAID-QRNKELI 27 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD-~RNKeLI 27 (72)
+..+...++.+|.||+.+ ..+++.+
T Consensus 151 ~~~v~~~a~~aL~~l~~~~~~~~~~~ 176 (210)
T 4db6_A 151 NEQILQEALWALSNIASGGNEQKQAV 176 (210)
T ss_dssp CHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 567888999999999988 6666655
No 17
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=65.82 E-value=16 Score=22.27 Aligned_cols=26 Identities=31% Similarity=0.192 Sum_probs=21.7
Q ss_pred chHHHHHHHHHHHhhhhh-hhhHHHHH
Q psy15602 3 VDRVVCAAATALRNLAID-QRNKELID 28 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD-~RNKeLI~ 28 (72)
++.+...++.+|.|++.+ ..+++.+.
T Consensus 57 ~~~v~~~a~~~L~~l~~~~~~~~~~~~ 83 (252)
T 4hxt_A 57 DSEVQKEAARALANIASGPDEAIKAIV 83 (252)
T ss_dssp CHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 467888899999999998 88887773
No 18
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=65.44 E-value=3.8 Score=31.57 Aligned_cols=19 Identities=21% Similarity=0.055 Sum_probs=16.5
Q ss_pred chHHHHHHHHHHHhhhhhh
Q psy15602 3 VDRVVCAAATALRNLAIDQ 21 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD~ 21 (72)
+..|+.++++|||||+++.
T Consensus 89 ~~~Vr~~A~gaLrnL~~~~ 107 (684)
T 4gmo_A 89 NIDSRAAGWEILKVLAQEE 107 (684)
T ss_dssp CHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHhhc
Confidence 5678899999999999884
No 19
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=63.50 E-value=14 Score=23.03 Aligned_cols=26 Identities=19% Similarity=0.197 Sum_probs=21.1
Q ss_pred chHHHHHHHHHHHhhhh-hhhhHHHHH
Q psy15602 3 VDRVVCAAATALRNLAI-DQRNKELID 28 (72)
Q Consensus 3 ~drVv~a~ataLRNLAl-D~RNKeLI~ 28 (72)
++.+...++.+|.|++. +..+++.+.
T Consensus 67 ~~~v~~~a~~~L~~l~~~~~~~~~~i~ 93 (252)
T 4db8_A 67 NEQILQEALWALSNIASGGNEQIQAVI 93 (252)
T ss_dssp CHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 45678889999999998 677887773
No 20
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=61.70 E-value=14 Score=26.77 Aligned_cols=26 Identities=27% Similarity=0.234 Sum_probs=20.6
Q ss_pred CchHHHHHHHHHHHhhhhhh-hhHHHH
Q psy15602 2 EVDRVVCAAATALRNLAIDQ-RNKELI 27 (72)
Q Consensus 2 ~~drVv~a~ataLRNLAlD~-RNKeLI 27 (72)
+++.|...++.||+|||.|. .+++.+
T Consensus 155 ~~~~v~e~A~~aL~nLa~d~~~~r~~v 181 (510)
T 3ul1_B 155 PHAHISEQAVWALGNIAGDGSAFRDLV 181 (510)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 35678889999999999984 556666
No 21
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=61.20 E-value=14 Score=27.33 Aligned_cols=26 Identities=19% Similarity=0.040 Sum_probs=21.6
Q ss_pred chHHHHHHHHHHHhhhhhhhhHHHHH
Q psy15602 3 VDRVVCAAATALRNLAIDQRNKELID 28 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD~RNKeLI~ 28 (72)
+..+...++.+|+||+.+..|++.|.
T Consensus 70 ~~~~~~~A~~~L~~Ls~~~~~~~~i~ 95 (644)
T 2z6h_A 70 DVETARCTAGTLHNLSHHREGLLAIF 95 (644)
T ss_dssp CHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcChhhHHHHH
Confidence 44677888999999999988888883
No 22
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=60.39 E-value=10 Score=29.49 Aligned_cols=25 Identities=36% Similarity=0.400 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHHhhhhhhhhHHHHH
Q psy15602 4 DRVVCAAATALRNLAIDQRNKELID 28 (72)
Q Consensus 4 drVv~a~ataLRNLAlD~RNKeLI~ 28 (72)
+.++.+++.+|+||+.+..|+..|.
T Consensus 566 ~~v~~~a~~aL~~La~~~~~~~~l~ 590 (780)
T 2z6g_A 566 EEIVEACTGALHILARDIHNRIVIR 590 (780)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcChhhHHHHH
Confidence 5577899999999999999988774
No 23
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=57.70 E-value=12 Score=25.87 Aligned_cols=42 Identities=33% Similarity=0.282 Sum_probs=29.9
Q ss_pred CchHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhCCC
Q psy15602 2 EVDRVVCAAATALRNLAIDQRNKELIDAFEANLILIELNLSP 43 (72)
Q Consensus 2 ~~drVv~a~ataLRNLAlD~RNKeLI~~~~~~~~~~~~~~~~ 43 (72)
+++.|.+.++.+|.||+-|+.+++.|.+..+-..+.++--+.
T Consensus 472 ~~~~v~~~a~~~l~~l~~~~~~~~~i~~~~~~~~L~~l~~~~ 513 (529)
T 1jdh_A 472 PIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSR 513 (529)
T ss_dssp SCHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHGGGCS
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHcCChHHHHHHhcCC
Confidence 356788899999999999998988886544444444444343
No 24
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=55.63 E-value=20 Score=27.83 Aligned_cols=26 Identities=15% Similarity=0.023 Sum_probs=21.8
Q ss_pred chHHHHHHHHHHHhhhhhhhhHHHHH
Q psy15602 3 VDRVVCAAATALRNLAIDQRNKELID 28 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD~RNKeLI~ 28 (72)
+..+.+.++.+|+||+.+..|++.|.
T Consensus 206 d~~vr~~Aa~aL~~Ls~~~~~~~~i~ 231 (780)
T 2z6g_A 206 DVETARCTSGTLHNLSHHREGLLAIF 231 (780)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 34577889999999999999988884
No 25
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=54.87 E-value=19 Score=26.11 Aligned_cols=27 Identities=22% Similarity=0.132 Sum_probs=21.5
Q ss_pred CchHHHHHHHHHHHhhhhh-hhhHHHHH
Q psy15602 2 EVDRVVCAAATALRNLAID-QRNKELID 28 (72)
Q Consensus 2 ~~drVv~a~ataLRNLAlD-~RNKeLI~ 28 (72)
.+..|...++.||.|||.| +.+++.|.
T Consensus 174 ~~~~v~e~A~~aL~nLa~~~~~~r~~i~ 201 (529)
T 3tpo_A 174 PHAHISEQAVWALGNIAGAGSAFRDLVI 201 (529)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 3567888899999999997 56777773
No 26
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=50.36 E-value=29 Score=25.14 Aligned_cols=37 Identities=22% Similarity=0.144 Sum_probs=23.7
Q ss_pred chHHHHHHHHHHHhhhh-hhhhHHHHHHHHHHHHHHHh
Q psy15602 3 VDRVVCAAATALRNLAI-DQRNKELIDAFEANLILIEL 39 (72)
Q Consensus 3 ~drVv~a~ataLRNLAl-D~RNKeLI~~~~~~~~~~~~ 39 (72)
++.+...+|.||.|+|- ++.++..|.+--+=..|+.+
T Consensus 114 ~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~l 151 (510)
T 3ul1_B 114 CSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISL 151 (510)
T ss_dssp CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHH
Confidence 34677789999999975 56677777433333334433
No 27
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=40.64 E-value=26 Score=28.82 Aligned_cols=37 Identities=8% Similarity=-0.072 Sum_probs=27.0
Q ss_pred chHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHh
Q psy15602 3 VDRVVCAAATALRNLAIDQRNKELIDAFEANLILIEL 39 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD~RNKeLI~~~~~~~~~~~~ 39 (72)
++.+...++.+|.|+|.|+.|+..|.+--+=..|+.+
T Consensus 508 s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv~L 544 (810)
T 3now_A 508 SHNSQELIARVLNAVCGLKELRGKVVQEGGVKALLRM 544 (810)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHH
Confidence 4677888999999999999999888543333334433
No 28
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=36.39 E-value=59 Score=22.83 Aligned_cols=25 Identities=36% Similarity=0.367 Sum_probs=19.3
Q ss_pred chHHHHHHHHHHHhhhhh-hhhHHHH
Q psy15602 3 VDRVVCAAATALRNLAID-QRNKELI 27 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD-~RNKeLI 27 (72)
++.|...++.+|.|++.+ ..+++.+
T Consensus 173 ~~~v~~~a~~aL~~l~~~~~~~~~~i 198 (528)
T 4b8j_A 173 SDDVREQAVWALGNVAGDSPKCRDLV 198 (528)
T ss_dssp CHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCChhhHHHH
Confidence 567888899999999987 4456555
No 29
>1z2z_A Probable tRNA pseudouridine synthase D; alpha-beta protein., structural genomics, PSI, protein structure initiative; 2.60A {Methanosarcina mazei}
Probab=32.35 E-value=8.1 Score=29.17 Aligned_cols=20 Identities=30% Similarity=0.604 Sum_probs=16.7
Q ss_pred HHhhCCCCchhhh---HHHHhhh
Q psy15602 37 IELNLSPPAGKYA---MRDLVQK 56 (72)
Q Consensus 37 ~~~~~~~~~GkyA---mrdLV~k 56 (72)
+.++|+||+|.|| +|+|+..
T Consensus 410 l~L~F~Lp~GsYAT~~LREl~k~ 432 (446)
T 1z2z_A 410 AVLEFMLPKGSYATTVLREYMKV 432 (446)
T ss_dssp EEEBCEEETTCCTHHHHHHHHCC
T ss_pred EEEEEEcCCccHHHHHHHHHhCC
Confidence 4578999999999 8898854
No 30
>3f5h_A Type I polyketide synthase PIKAIII, type I polyketide synthase pikaiv fusion protein...; docking domain, pikromycin, H2-T2; 1.75A {Streptomyces venezuelae}
Probab=32.30 E-value=21 Score=21.64 Aligned_cols=14 Identities=43% Similarity=0.551 Sum_probs=12.7
Q ss_pred HHHHHhhhhhhhhH
Q psy15602 11 ATALRNLAIDQRNK 24 (72)
Q Consensus 11 ataLRNLAlD~RNK 24 (72)
|-+||||++-+||.
T Consensus 18 ~~~~~~~~~~~~~t 31 (68)
T 3f5h_A 18 AEALIRMALGPRNT 31 (68)
T ss_dssp HHHHHHHHHCHHHH
T ss_pred HHHHHHHhcCCccc
Confidence 56899999999998
No 31
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=32.26 E-value=80 Score=21.01 Aligned_cols=18 Identities=28% Similarity=0.027 Sum_probs=14.9
Q ss_pred chHHHHHHHHHHHhhhhh
Q psy15602 3 VDRVVCAAATALRNLAID 20 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD 20 (72)
+..|...++.+|.|++.+
T Consensus 331 ~~~v~~~a~~~L~~l~~~ 348 (450)
T 2jdq_A 331 EFRTRKEAAWAITNATSG 348 (450)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcC
Confidence 456888899999999875
No 32
>1szw_A TRNA pseudouridine synthase D; novel fold, RNA modification, TRUD, structural proteomics in europe, spine, structural genomics; 2.00A {Escherichia coli} SCOP: d.265.1.4 PDB: 1si7_A 1sb7_A
Probab=29.16 E-value=3.1 Score=31.58 Aligned_cols=20 Identities=35% Similarity=0.788 Sum_probs=16.1
Q ss_pred HHhhCCCCchhhh---HHHHhhh
Q psy15602 37 IELNLSPPAGKYA---MRDLVQK 56 (72)
Q Consensus 37 ~~~~~~~~~GkyA---mrdLV~k 56 (72)
+.++|+||+|.|| +|+|+..
T Consensus 340 l~L~F~LP~GsYAT~vLREl~k~ 362 (379)
T 1szw_A 340 VEIRFWLPAGSFATSVVRELINT 362 (379)
T ss_dssp EEEEEEEETTCCHHHHHTTTCBC
T ss_pred EEEEEEeCCchHHHHHHHHHhcC
Confidence 4578999999999 7777743
No 33
>2gyq_A YCFI, putative structural protein; structural genomics, APC6105, iron-binding, PSI, protein STR initiative; 1.40A {Rhodopseudomonas palustris} SCOP: a.25.1.4
Probab=29.12 E-value=1.3e+02 Score=20.13 Aligned_cols=46 Identities=20% Similarity=0.324 Sum_probs=35.5
Q ss_pred HHHHHHhhhhhhhhHHHHHHHHHHHH------------HHHhhCCCCchh-hhHHHHhh
Q psy15602 10 AATALRNLAIDQRNKELIDAFEANLI------------LIELNLSPPAGK-YAMRDLVQ 55 (72)
Q Consensus 10 ~ataLRNLAlD~RNKeLI~~~~~~~~------------~~~~~~~~~~Gk-yAmrdLV~ 55 (72)
+..+|.-|+-...|.+|-.+|+.|+. |-.++.+|+..| .+|..|+.
T Consensus 31 ~~~aL~~~~~~a~~p~Lk~~l~~H~~eT~~qi~rLe~i~~~lg~~~~~~~c~am~gli~ 89 (173)
T 2gyq_A 31 ITKALPKMIEQATNRDLSQGLTSHLEETQKQIERLDQVFKKLGQKPSGVNCPAIDGLIK 89 (173)
T ss_dssp HHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH
Confidence 45788888888888888888888864 345677777778 88887775
No 34
>2kk1_A Tyrosine-protein kinase ABL2; methods development, tyrosin protein kinase ABL2, F-actin binding domain, NESG, alternative splicing, ATP-binding; NMR {Homo sapiens}
Probab=25.51 E-value=16 Score=25.31 Aligned_cols=24 Identities=25% Similarity=0.302 Sum_probs=19.8
Q ss_pred HHhhCCCCchhhhHHHHhhhCCCC
Q psy15602 37 IELNLSPPAGKYAMRDLVQKLPSG 60 (72)
Q Consensus 37 ~~~~~~~~~GkyAmrdLV~kLP~~ 60 (72)
..-+.+++-.|+|.|++|.||+..
T Consensus 76 yvD~i~q~rnKFaFREavsrLe~s 99 (135)
T 2kk1_A 76 YVDCIPQTRNKFAFREAVSKLELS 99 (135)
T ss_dssp HGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred chhcccchhhHHHHHHHHHHHHHH
Confidence 456777888999999999999754
No 35
>2gs4_A Protein YCIF; stress proteins, rubrerythrin, metal binding protein; 2.00A {Escherichia coli} SCOP: a.25.1.4
Probab=23.62 E-value=1.5e+02 Score=19.62 Aligned_cols=47 Identities=34% Similarity=0.326 Sum_probs=35.4
Q ss_pred HHHHHHhhhhhhhhHHHHHHHHHHHHH------------HH-hhCCCCchh-hhHHHHhhh
Q psy15602 10 AATALRNLAIDQRNKELIDAFEANLIL------------IE-LNLSPPAGK-YAMRDLVQK 56 (72)
Q Consensus 10 ~ataLRNLAlD~RNKeLI~~~~~~~~~------------~~-~~~~~~~Gk-yAmrdLV~k 56 (72)
+..+|.-|+-...|.+|-..|+.|+.- -. ++.+|+..| .+|..|+..
T Consensus 24 ~~~al~~~~~~a~~p~Lk~~l~~h~~eT~~qi~rLe~i~~~~lg~~~~~~~c~am~gli~e 84 (166)
T 2gs4_A 24 LTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRMKCVAMEGLIEE 84 (166)
T ss_dssp HHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH
Confidence 457888888888888998888888643 34 577777777 888887753
No 36
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=22.87 E-value=1.2e+02 Score=21.74 Aligned_cols=40 Identities=23% Similarity=0.117 Sum_probs=24.6
Q ss_pred chHHHHHHHHHHHhhhh-hhhhHHHHHHHHHHHHHHHhhCC
Q psy15602 3 VDRVVCAAATALRNLAI-DQRNKELIDAFEANLILIELNLS 42 (72)
Q Consensus 3 ~drVv~a~ataLRNLAl-D~RNKeLI~~~~~~~~~~~~~~~ 42 (72)
+..+...++.+|.|+|- ++.++..|.+--+-..|+.+--|
T Consensus 133 ~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s 173 (529)
T 3tpo_A 133 CSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLAS 173 (529)
T ss_dssp CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcC
Confidence 35577789999999986 45566666443333444444333
No 37
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=21.97 E-value=1.8e+02 Score=20.52 Aligned_cols=18 Identities=17% Similarity=0.001 Sum_probs=15.4
Q ss_pred chHHHHHHHHHHHhhhhh
Q psy15602 3 VDRVVCAAATALRNLAID 20 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD 20 (72)
+..|...++.+|.|++.+
T Consensus 396 ~~~v~~~a~~aL~~l~~~ 413 (530)
T 1wa5_B 396 EYKTKKEACWAISNASSG 413 (530)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 467888999999999886
No 38
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=21.61 E-value=65 Score=26.51 Aligned_cols=26 Identities=27% Similarity=0.183 Sum_probs=22.9
Q ss_pred chHHHHHHHHHHHhhhhhhhhHHHHH
Q psy15602 3 VDRVVCAAATALRNLAIDQRNKELID 28 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD~RNKeLI~ 28 (72)
++.+.+.++.+|.+|+.++.+|+.|.
T Consensus 392 d~~v~~~AveaLayLS~~~~vk~~lv 417 (810)
T 3now_A 392 DKDIRRWAADGLAYLTLDAECKEKLI 417 (810)
T ss_dssp CSSHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence 45688899999999999999999885
No 39
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=20.75 E-value=1.6e+02 Score=24.46 Aligned_cols=53 Identities=11% Similarity=0.051 Sum_probs=35.1
Q ss_pred chHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhCCCCc----hh-hhHHHHhh
Q psy15602 3 VDRVVCAAATALRNLAIDQRNKELIDAFEANLILIELNLSPPA----GK-YAMRDLVQ 55 (72)
Q Consensus 3 ~drVv~a~ataLRNLAlD~RNKeLI~~~~~~~~~~~~~~~~~~----Gk-yAmrdLV~ 55 (72)
++.+...++.+|-||+.|+.|+..+.+--+=..++.+-.+-+. +| .|.+-|..
T Consensus 470 s~~~re~A~~aL~nLS~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALAr 527 (778)
T 3opb_A 470 SPNCKQQVVRIIYNITRSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTR 527 (778)
T ss_dssp CHHHHHHHHHHHHHHHTSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHH
Confidence 4567778899999999999999999655554556665444322 44 45444443
Done!