BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15604
(986 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Z6G|A Chain A, Crystal Structure Of A Full-Length Zebrafish Beta-Catenin
Length = 780
Score = 561 bits (1446), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/367 (75%), Positives = 308/367 (83%), Gaps = 13/367 (3%)
Query: 440 MFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELI 499
MFPETL+EG++IPSTQFD+A PT VQRL EPSQMLKHAVVNLINYQDDA+LATRAIPEL
Sbjct: 97 MFPETLDEGMQIPSTQFDSAHPTNVQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELT 156
Query: 500 KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGT 559
KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V + N+ND+ET + GT
Sbjct: 157 KLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGT 216
Query: 560 LHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAG 619
LHNLSHHR+GLLAIFKSGGIPALV +L SPV+SVLF+AITTLHNLLLHQEG+KMAVRLAG
Sbjct: 217 LHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAG 276
Query: 620 GLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLL 679
GLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP LV IMR+Y YEKLL
Sbjct: 277 GLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLL 336
Query: 680 WCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDG 739
W TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCLWTLRNLSDA TK +G
Sbjct: 337 WTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEG 396
Query: 740 XXXXXXXXXXXXXXXDINVITCAAGV-------------TVCQVGGVEALVQTIVNAGDR 786
DINV+TCAAG+ VCQVGG+EALV+T++ AGDR
Sbjct: 397 MEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDR 456
Query: 787 EEITEPA 793
E+ITEPA
Sbjct: 457 EDITEPA 463
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 264/502 (52%), Positives = 316/502 (62%), Gaps = 55/502 (10%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V +
Sbjct: 142 QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTM 201
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALV +L SPV+SVLF+AITTLHNL
Sbjct: 202 QNTNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNL 261
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 292
LLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP
Sbjct: 262 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 321
Query: 293 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 352
LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCL
Sbjct: 322 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCL 381
Query: 353 WTLRNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXX 401
WTLRNLSDA TK V LL ++ N+ AAG+L L +
Sbjct: 382 WTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK--------- 432
Query: 402 XXPLTDLLHSRNEGVEILIQGVXXXXXXXXXXXXRGC-LMFPETLEEGIEIP--STQFDT 458
++ + G+E L++ V C L + + E+ + +
Sbjct: 433 ----NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHY 488
Query: 459 AQPTAVQRLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVVS 511
P V+ L PS L A V LI + A L + AIP L++LL
Sbjct: 489 GLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL--------- 539
Query: 512 QAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLL 571
+ HQ +++ S M Q V + +E GA+ L H+R +
Sbjct: 540 ---VRAHQDTQRRTS----MGGTQQ--QFVEGVRMEEIVEACTGALHILARDIHNR---I 587
Query: 572 AIFKSGGIPALVKLLSSPVESV 593
I IP V+LL SP+E++
Sbjct: 588 VIRGLNTIPLFVQLLYSPIENI 609
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 107/132 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH ++EMAQNAVRL+YG+ +V L
Sbjct: 437 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPVVVKL 496
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 497 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 556
Query: 973 RSFLGGVVVKTL 984
+ F+ GV ++ +
Sbjct: 557 QQFVEGVRMEEI 568
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 229/475 (48%), Gaps = 76/475 (16%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALV +L +
Sbjct: 192 QMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVL 251
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 252 FHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 307
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 308 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 365
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 366 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 418
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +Q+
Sbjct: 419 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAIC--ALRHLTSRHQD 476
Query: 281 SKL----IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 336
+++ + L PV +V+++ + L+ T +++ L++C +N + E G + L
Sbjct: 477 AEMAQNAVRLHYGLPV-VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRL 535
Query: 337 AMHL----------------------GHPSQRLVQNCLWTL-------------RNLSDA 361
L G + +V+ C L R L+
Sbjct: 536 VQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHILARDIHNRIVIRGLNTI 595
Query: 362 GTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 596 PLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 650
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%), Gaps = 4/45 (8%)
Query: 796 SVNMWQQQNYLVDSGIHSGVNTNAPSLTGK---EEDMDGDQLMFE 837
+V+ WQQQ+YL DSGIHSG T APSL+GK E+D +Q+++E
Sbjct: 21 AVSHWQQQSYL-DSGIHSGATTTAPSLSGKGNPEDDDVDNQVLYE 64
>pdb|1G3J|A Chain A, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1G3J|C Chain C, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1TH1|A Chain A, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
pdb|1TH1|B Chain B, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
Length = 532
Score = 506 bits (1303), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/332 (75%), Positives = 277/332 (83%), Gaps = 13/332 (3%)
Query: 475 KHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSP 534
KHAVVNLINYQDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SP
Sbjct: 1 KHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSP 60
Query: 535 QMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVL 594
QMV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVL
Sbjct: 61 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 120
Query: 595 FYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESK 654
FYAITTLHNLLLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESK
Sbjct: 121 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESK 180
Query: 655 LIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGH 714
LIILAS GP LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL
Sbjct: 181 LIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTD 240
Query: 715 PSQRLVQNCLWTLRNLSDAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV--------- 765
PSQRLVQNCLWTLRNLSDA TK +G DINV+TCAAG+
Sbjct: 241 PSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNY 300
Query: 766 ----TVCQVGGVEALVQTIVNAGDREEITEPA 793
VCQVGG+EALV+T++ AGDRE+ITEPA
Sbjct: 301 KNKMMVCQVGGIEALVRTVLRAGDREDITEPA 332
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 265/502 (52%), Positives = 314/502 (62%), Gaps = 55/502 (10%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V +
Sbjct: 11 QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTM 70
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNL
Sbjct: 71 QNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 130
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 292
LLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP
Sbjct: 131 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 190
Query: 293 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 352
LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCL
Sbjct: 191 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCL 250
Query: 353 WTLRNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXX 401
WTLRNLSDA TK V LL ++ N+ AAG+L L +
Sbjct: 251 WTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK--------- 301
Query: 402 XXPLTDLLHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFDT 458
++ + G+E L++ V C + T E + + +
Sbjct: 302 ----NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHY 357
Query: 459 AQPTAVQRLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVVS 511
P V+ L PS L A V LI + A L + AIP L++LL
Sbjct: 358 GLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL--------- 408
Query: 512 QAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLL 571
+ HQ +++ S M Q + E +G G LH L+ +
Sbjct: 409 ---VRAHQDTQRRTS----MGGTQQ-----QFVEGVRMEEIVEGCTGALHILARDVHNRI 456
Query: 572 AIFKSGGIPALVKLLSSPVESV 593
I IP V+LL SP+E++
Sbjct: 457 VIRGLNTIPLFVQLLYSPIENI 478
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+EMAQNAVRL+YG+ +V L
Sbjct: 306 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 365
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 366 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 425
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 426 QQFVEGV 432
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 229/478 (47%), Gaps = 82/478 (17%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 61 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 120
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 121 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 176
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 177 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 234
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 235 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 287
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 288 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 345
Query: 281 SKLIILASQGPVEL-------VRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGM 333
+++ +Q V L V+++ + L+ T +++ L++C +N + E G +
Sbjct: 346 AEM----AQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAI 401
Query: 334 QALAMHL----------------------GHPSQRLVQNCLWTL-------------RNL 358
L L G + +V+ C L R L
Sbjct: 402 PRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGL 461
Query: 359 SDAGTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
+ V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 462 NTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 519
>pdb|1QZ7|A Chain A, Beta-Catenin Binding Domain Of Axin In Complex With Beta-
Catenin
Length = 533
Score = 506 bits (1303), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/332 (75%), Positives = 277/332 (83%), Gaps = 13/332 (3%)
Query: 475 KHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSP 534
KHAVVNLINYQDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SP
Sbjct: 1 KHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSP 60
Query: 535 QMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVL 594
QMV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVL
Sbjct: 61 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 120
Query: 595 FYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESK 654
FYAITTLHNLLLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESK
Sbjct: 121 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESK 180
Query: 655 LIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGH 714
LIILAS GP LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL
Sbjct: 181 LIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTD 240
Query: 715 PSQRLVQNCLWTLRNLSDAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV--------- 765
PSQRLVQNCLWTLRNLSDA TK +G DINV+TCAAG+
Sbjct: 241 PSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNY 300
Query: 766 ----TVCQVGGVEALVQTIVNAGDREEITEPA 793
VCQVGG+EALV+T++ AGDRE+ITEPA
Sbjct: 301 KNKMMVCQVGGIEALVRTVLRAGDREDITEPA 332
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 265/502 (52%), Positives = 314/502 (62%), Gaps = 55/502 (10%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V +
Sbjct: 11 QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTM 70
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNL
Sbjct: 71 QNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 130
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 292
LLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP
Sbjct: 131 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 190
Query: 293 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 352
LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCL
Sbjct: 191 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCL 250
Query: 353 WTLRNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXX 401
WTLRNLSDA TK V LL ++ N+ AAG+L L +
Sbjct: 251 WTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK--------- 301
Query: 402 XXPLTDLLHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFDT 458
++ + G+E L++ V C + T E + + +
Sbjct: 302 ----NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHY 357
Query: 459 AQPTAVQRLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVVS 511
P V+ L PS L A V LI + A L + AIP L++LL
Sbjct: 358 GLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL--------- 408
Query: 512 QAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLL 571
+ HQ +++ S M Q + E +G G LH L+ +
Sbjct: 409 ---VRAHQDTQRRTS----MGGTQQ-----QFVEGVRMEEIVEGCTGALHILARDVHNRI 456
Query: 572 AIFKSGGIPALVKLLSSPVESV 593
I IP V+LL SP+E++
Sbjct: 457 VIRGLNTIPLFVQLLYSPIENI 478
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+EMAQNAVRL+YG+ +V L
Sbjct: 306 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 365
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 366 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 425
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 426 QQFVEGV 432
Score = 146 bits (368), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 229/478 (47%), Gaps = 82/478 (17%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 61 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 120
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 121 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 176
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 177 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 234
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 235 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 287
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 288 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 345
Query: 281 SKLIILASQGPVEL-------VRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGM 333
+++ +Q V L V+++ + L+ T +++ L++C +N + E G +
Sbjct: 346 AEM----AQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAI 401
Query: 334 QALAMHL----------------------GHPSQRLVQNCLWTL-------------RNL 358
L L G + +V+ C L R L
Sbjct: 402 PRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGL 461
Query: 359 SDAGTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
+ V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 462 NTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 519
>pdb|1JPW|A Chain A, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|B Chain B, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|C Chain C, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
Length = 540
Score = 505 bits (1300), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/334 (75%), Positives = 277/334 (82%), Gaps = 13/334 (3%)
Query: 473 MLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMN 532
M HAVVNLINYQDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM
Sbjct: 1 MGSHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMR 60
Query: 533 SPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVES 592
SPQMV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+S
Sbjct: 61 SPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDS 120
Query: 593 VLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQE 652
VLFYAITTLHNLLLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQE
Sbjct: 121 VLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQE 180
Query: 653 SKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHL 712
SKLIILAS GP LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL
Sbjct: 181 SKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHL 240
Query: 713 GHPSQRLVQNCLWTLRNLSDAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV------- 765
PSQRLVQNCLWTLRNLSDA TK +G DINV+TCAAG+
Sbjct: 241 TDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCN 300
Query: 766 ------TVCQVGGVEALVQTIVNAGDREEITEPA 793
VCQVGG+EALV+T++ AGDRE+ITEPA
Sbjct: 301 NYKNKMMVCQVGGIEALVRTVLRAGDREDITEPA 334
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 265/502 (52%), Positives = 314/502 (62%), Gaps = 55/502 (10%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V +
Sbjct: 13 QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTM 72
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNL
Sbjct: 73 QNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 132
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 292
LLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP
Sbjct: 133 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 192
Query: 293 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 352
LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCL
Sbjct: 193 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCL 252
Query: 353 WTLRNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXX 401
WTLRNLSDA TK V LL ++ N+ AAG+L L +
Sbjct: 253 WTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK--------- 303
Query: 402 XXPLTDLLHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFDT 458
++ + G+E L++ V C + T E + + +
Sbjct: 304 ----NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHY 359
Query: 459 AQPTAVQRLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVVS 511
P V+ L PS L A V LI + A L + AIP L++LL
Sbjct: 360 GLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL--------- 410
Query: 512 QAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLL 571
+ HQ +++ S M Q + E +G G LH L+ +
Sbjct: 411 ---VRAHQDTQRRTS----MGGTQQ-----QFVEGVRMEEIVEGCTGALHILARDVHNRI 458
Query: 572 AIFKSGGIPALVKLLSSPVESV 593
I IP V+LL SP+E++
Sbjct: 459 VIRGLNTIPLFVQLLYSPIENI 480
Score = 186 bits (471), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+EMAQNAVRL+YG+ +V L
Sbjct: 308 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 367
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 368 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 427
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 428 QQFVEGV 434
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 230/475 (48%), Gaps = 76/475 (16%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 63 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 122
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 123 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 178
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 179 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 236
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 237 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 289
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 290 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 347
Query: 281 SKL----IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 336
+++ + L PV +V+++ + L+ T +++ L++C +N + E G + L
Sbjct: 348 AEMAQNAVRLHYGLPV-VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRL 406
Query: 337 AMHL----------------------GHPSQRLVQNCLWTL-------------RNLSDA 361
L G + +V+ C L R L+
Sbjct: 407 VQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTI 466
Query: 362 GTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 467 PLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 521
>pdb|3OUW|A Chain A, Structure Of Beta-Catenin With Lef-1
pdb|3OUX|A Chain A, Structure Of Beta-Catenin With Phosphorylated Lef-1
Length = 540
Score = 504 bits (1299), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/331 (75%), Positives = 276/331 (83%), Gaps = 13/331 (3%)
Query: 476 HAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQ 535
HAVVNLINYQDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQ
Sbjct: 3 HAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQ 62
Query: 536 MVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLF 595
MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLF
Sbjct: 63 MVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLF 122
Query: 596 YAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKL 655
YAITTLHNLLLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKL
Sbjct: 123 YAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKL 182
Query: 656 IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHP 715
IILAS GP LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL P
Sbjct: 183 IILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP 242
Query: 716 SQRLVQNCLWTLRNLSDAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV---------- 765
SQRLVQNCLWTLRNLSDA TK +G DINV+TCAAG+
Sbjct: 243 SQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK 302
Query: 766 ---TVCQVGGVEALVQTIVNAGDREEITEPA 793
VCQVGG+EALV+T++ AGDRE+ITEPA
Sbjct: 303 NKMMVCQVGGIEALVRTVLRAGDREDITEPA 333
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 266/502 (52%), Positives = 315/502 (62%), Gaps = 55/502 (10%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V +
Sbjct: 12 QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTM 71
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNL
Sbjct: 72 QNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 131
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 292
LLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP
Sbjct: 132 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 191
Query: 293 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 352
LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCL
Sbjct: 192 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCL 251
Query: 353 WTLRNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXX 401
WTLRNLSDA TK V LL ++ N+ AAG+L L +
Sbjct: 252 WTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK--------- 302
Query: 402 XXPLTDLLHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFDT 458
++ + G+E L++ V C + T E + + +
Sbjct: 303 ----NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHY 358
Query: 459 AQPTAVQRLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVVS 511
P V+ L PS L A V LI + A L + AIP L++LL
Sbjct: 359 GLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL--------- 409
Query: 512 QAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLL 571
+ HQ +++ S M Q V + E +G G LH L+ +
Sbjct: 410 ---VRAHQDTQRRTS----MGGTQQ--QFVEGVRME---EIVEGCTGALHILARDVHNRI 457
Query: 572 AIFKSGGIPALVKLLSSPVESV 593
I IP V+LL SP+E++
Sbjct: 458 VIRGLNTIPLFVQLLYSPIENI 479
Score = 186 bits (471), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+EMAQNAVRL+YG+ +V L
Sbjct: 307 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 366
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 367 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 426
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 427 QQFVEGV 433
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 230/475 (48%), Gaps = 76/475 (16%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 62 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 121
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 122 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 177
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 178 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 235
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 236 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 288
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 289 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 346
Query: 281 SKL----IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 336
+++ + L PV +V+++ + L+ T +++ L++C +N + E G + L
Sbjct: 347 AEMAQNAVRLHYGLPV-VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRL 405
Query: 337 AMHL----------------------GHPSQRLVQNCLWTL-------------RNLSDA 361
L G + +V+ C L R L+
Sbjct: 406 VQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTI 465
Query: 362 GTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 466 PLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 520
>pdb|1I7X|A Chain A, Beta-CateninE-Cadherin Complex
pdb|1I7X|C Chain C, Beta-CateninE-Cadherin Complex
pdb|1I7W|A Chain A, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1I7W|C Chain C, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1JPP|A Chain A, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1JPP|B Chain B, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1M1E|A Chain A, Beta-Catenin Armadillo Repeat Domain Bound To Icat
pdb|1V18|A Chain A, The Crystal Structure Of Beta-Catenin Armadillo Repeat
Complexed With A Phosphorylated Apc 20mer Repeat
Length = 538
Score = 504 bits (1299), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/331 (75%), Positives = 276/331 (83%), Gaps = 13/331 (3%)
Query: 476 HAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQ 535
HAVVNLINYQDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQ
Sbjct: 1 HAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQ 60
Query: 536 MVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLF 595
MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLF
Sbjct: 61 MVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLF 120
Query: 596 YAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKL 655
YAITTLHNLLLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKL
Sbjct: 121 YAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKL 180
Query: 656 IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHP 715
IILAS GP LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL P
Sbjct: 181 IILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP 240
Query: 716 SQRLVQNCLWTLRNLSDAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV---------- 765
SQRLVQNCLWTLRNLSDA TK +G DINV+TCAAG+
Sbjct: 241 SQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK 300
Query: 766 ---TVCQVGGVEALVQTIVNAGDREEITEPA 793
VCQVGG+EALV+T++ AGDRE+ITEPA
Sbjct: 301 NKMMVCQVGGIEALVRTVLRAGDREDITEPA 331
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 266/502 (52%), Positives = 315/502 (62%), Gaps = 55/502 (10%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V +
Sbjct: 10 QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTM 69
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNL
Sbjct: 70 QNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 129
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 292
LLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP
Sbjct: 130 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 189
Query: 293 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 352
LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCL
Sbjct: 190 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCL 249
Query: 353 WTLRNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXX 401
WTLRNLSDA TK V LL ++ N+ AAG+L L +
Sbjct: 250 WTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK--------- 300
Query: 402 XXPLTDLLHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFDT 458
++ + G+E L++ V C + T E + + +
Sbjct: 301 ----NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHY 356
Query: 459 AQPTAVQRLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVVS 511
P V+ L PS L A V LI + A L + AIP L++LL
Sbjct: 357 GLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL--------- 407
Query: 512 QAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLL 571
+ HQ +++ S M Q V + E +G G LH L+ +
Sbjct: 408 ---VRAHQDTQRRTS----MGGTQQ--QFVEGVRME---EIVEGCTGALHILARDVHNRI 455
Query: 572 AIFKSGGIPALVKLLSSPVESV 593
I IP V+LL SP+E++
Sbjct: 456 VIRGLNTIPLFVQLLYSPIENI 477
Score = 186 bits (471), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+EMAQNAVRL+YG+ +V L
Sbjct: 305 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 364
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 365 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 424
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 425 QQFVEGV 431
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 230/475 (48%), Gaps = 76/475 (16%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 60 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 119
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 120 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 175
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 176 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 233
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 234 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 286
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 287 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 344
Query: 281 SKL----IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 336
+++ + L PV +V+++ + L+ T +++ L++C +N + E G + L
Sbjct: 345 AEMAQNAVRLHYGLPV-VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRL 403
Query: 337 AMHL----------------------GHPSQRLVQNCLWTL-------------RNLSDA 361
L G + +V+ C L R L+
Sbjct: 404 VQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTI 463
Query: 362 GTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 464 PLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 518
>pdb|1JDH|A Chain A, Crystal Structure Of Beta-Catenin And Htcf-4
Length = 529
Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/330 (75%), Positives = 275/330 (83%), Gaps = 13/330 (3%)
Query: 477 AVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQM 536
AVVNLINYQDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQM
Sbjct: 1 AVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQM 60
Query: 537 VAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFY 596
V+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFY
Sbjct: 61 VSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFY 120
Query: 597 AITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLI 656
AITTLHNLLLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLI
Sbjct: 121 AITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLI 180
Query: 657 ILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPS 716
ILAS GP LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PS
Sbjct: 181 ILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPS 240
Query: 717 QRLVQNCLWTLRNLSDAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV----------- 765
QRLVQNCLWTLRNLSDA TK +G DINV+TCAAG+
Sbjct: 241 QRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKN 300
Query: 766 --TVCQVGGVEALVQTIVNAGDREEITEPA 793
VCQVGG+EALV+T++ AGDRE+ITEPA
Sbjct: 301 KMMVCQVGGIEALVRTVLRAGDREDITEPA 330
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 265/502 (52%), Positives = 314/502 (62%), Gaps = 55/502 (10%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V +
Sbjct: 9 QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTM 68
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNL
Sbjct: 69 QNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 128
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 292
LLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP
Sbjct: 129 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 188
Query: 293 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 352
LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCL
Sbjct: 189 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCL 248
Query: 353 WTLRNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXX 401
WTLRNLSDA TK V LL ++ N+ AAG+L L +
Sbjct: 249 WTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK--------- 299
Query: 402 XXPLTDLLHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFDT 458
++ + G+E L++ V C + T E + + +
Sbjct: 300 ----NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHY 355
Query: 459 AQPTAVQRLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVVS 511
P V+ L PS L A V LI + A L + AIP L++LL
Sbjct: 356 GLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL--------- 406
Query: 512 QAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLL 571
+ HQ +++ S M Q + E +G G LH L+ +
Sbjct: 407 ---VRAHQDTQRRTS----MGGTQQ-----QFVEGVRMEEIVEGCTGALHILARDVHNRI 454
Query: 572 AIFKSGGIPALVKLLSSPVESV 593
I IP V+LL SP+E++
Sbjct: 455 VIRGLNTIPLFVQLLYSPIENI 476
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+EMAQNAVRL+YG+ +V L
Sbjct: 304 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 363
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 364 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 423
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 424 QQFVEGV 430
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 229/478 (47%), Gaps = 82/478 (17%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 59 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 118
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 119 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 174
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 175 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 232
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 233 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 285
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 286 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 343
Query: 281 SKLIILASQGPVEL-------VRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGM 333
+++ +Q V L V+++ + L+ T +++ L++C +N + E G +
Sbjct: 344 AEM----AQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAI 399
Query: 334 QALAMHL----------------------GHPSQRLVQNCLWTL-------------RNL 358
L L G + +V+ C L R L
Sbjct: 400 PRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGL 459
Query: 359 SDAGTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
+ V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 460 NTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 517
>pdb|3TX7|A Chain A, Crystal Structure Of Lrh-1BETA-Catenin Complex
Length = 527
Score = 497 bits (1280), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/327 (75%), Positives = 272/327 (83%), Gaps = 13/327 (3%)
Query: 480 NLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 539
NLINYQDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A
Sbjct: 2 NLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSA 61
Query: 540 LVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAIT 599
+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAIT
Sbjct: 62 IVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAIT 121
Query: 600 TLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILA 659
TLHNLLLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILA
Sbjct: 122 TLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILA 181
Query: 660 SQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRL 719
S GP LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRL
Sbjct: 182 SGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRL 241
Query: 720 VQNCLWTLRNLSDAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV-------------T 766
VQNCLWTLRNLSDA TK +G DINV+TCAAG+
Sbjct: 242 VQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMM 301
Query: 767 VCQVGGVEALVQTIVNAGDREEITEPA 793
VCQVGG+EALV+T++ AGDRE+ITEPA
Sbjct: 302 VCQVGGIEALVRTVLRAGDREDITEPA 328
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 265/502 (52%), Positives = 314/502 (62%), Gaps = 55/502 (10%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V +
Sbjct: 7 QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTM 66
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNL
Sbjct: 67 QNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 126
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 292
LLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP
Sbjct: 127 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 186
Query: 293 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 352
LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCL
Sbjct: 187 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCL 246
Query: 353 WTLRNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXX 401
WTLRNLSDA TK V LL ++ N+ AAG+L L +
Sbjct: 247 WTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK--------- 297
Query: 402 XXPLTDLLHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFDT 458
++ + G+E L++ V C + T E + + +
Sbjct: 298 ----NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHY 353
Query: 459 AQPTAVQRLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVVS 511
P V+ L PS L A V LI + A L + AIP L++LL
Sbjct: 354 GLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL--------- 404
Query: 512 QAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLL 571
+ HQ +++ S M Q + E +G G LH L+ +
Sbjct: 405 ---VRAHQDTQRRTS----MGGTQQ-----QFVEGVRMEEIVEGCTGALHILARDVHNRI 452
Query: 572 AIFKSGGIPALVKLLSSPVESV 593
I IP V+LL SP+E++
Sbjct: 453 VIRGLNTIPLFVQLLYSPIENI 474
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+EMAQNAVRL+YG+ +V L
Sbjct: 302 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 361
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 362 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 421
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 422 QQFVEGV 428
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 229/478 (47%), Gaps = 82/478 (17%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 57 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 116
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 117 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 172
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 173 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 230
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 231 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 283
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 284 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 341
Query: 281 SKLIILASQGPVEL-------VRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGM 333
+++ +Q V L V+++ + L+ T +++ L++C +N + E G +
Sbjct: 342 AEM----AQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAI 397
Query: 334 QALAMHL----------------------GHPSQRLVQNCLWTL-------------RNL 358
L L G + +V+ C L R L
Sbjct: 398 PRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGL 457
Query: 359 SDAGTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
+ V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 458 NTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 515
>pdb|2Z6H|A Chain A, Crystal Structure Of Beta-Catenin Armadillo Repeat Region
And Its C-Terminal Domain
Length = 644
Score = 494 bits (1272), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/327 (75%), Positives = 272/327 (83%), Gaps = 13/327 (3%)
Query: 480 NLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 539
NLINYQDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A
Sbjct: 1 NLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSA 60
Query: 540 LVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAIT 599
+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAIT
Sbjct: 61 IVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAIT 120
Query: 600 TLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILA 659
TLHNLLLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILA
Sbjct: 121 TLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILA 180
Query: 660 SQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRL 719
S GP LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRL
Sbjct: 181 SGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRL 240
Query: 720 VQNCLWTLRNLSDAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV-------------T 766
VQNCLWTLRNLSDA TK +G DINV+TCAAG+
Sbjct: 241 VQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMM 300
Query: 767 VCQVGGVEALVQTIVNAGDREEITEPA 793
VCQVGG+EALV+T++ AGDRE+ITEPA
Sbjct: 301 VCQVGGIEALVRTVLRAGDREDITEPA 327
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 266/502 (52%), Positives = 315/502 (62%), Gaps = 55/502 (10%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V +
Sbjct: 6 QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTM 65
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNL
Sbjct: 66 QNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 125
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 292
LLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP
Sbjct: 126 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 185
Query: 293 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 352
LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCL
Sbjct: 186 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCL 245
Query: 353 WTLRNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXX 401
WTLRNLSDA TK V LL ++ N+ AAG+L L +
Sbjct: 246 WTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK--------- 296
Query: 402 XXPLTDLLHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFDT 458
++ + G+E L++ V C + T E + + +
Sbjct: 297 ----NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHY 352
Query: 459 AQPTAVQRLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVVS 511
P V+ L PS L A V LI + A L + AIP L++LL
Sbjct: 353 GLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL--------- 403
Query: 512 QAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLL 571
+ HQ +++ S M Q V + E +G G LH L+ +
Sbjct: 404 ---VRAHQDTQRRTS----MGGTQQ--QFVEGVRME---EIVEGCTGALHILARDVHNRI 451
Query: 572 AIFKSGGIPALVKLLSSPVESV 593
I IP V+LL SP+E++
Sbjct: 452 VIRGLNTIPLFVQLLYSPIENI 473
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+EMAQNAVRL+YG+ +V L
Sbjct: 301 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 360
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 361 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 420
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 421 QQFVEGV 427
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 230/475 (48%), Gaps = 76/475 (16%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 56 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 115
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 116 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 171
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 172 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 229
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 230 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 282
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 283 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 340
Query: 281 SKL----IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 336
+++ + L PV +V+++ + L+ T +++ L++C +N + E G + L
Sbjct: 341 AEMAQNAVRLHYGLPV-VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRL 399
Query: 337 AMHL----------------------GHPSQRLVQNCLWTL-------------RNLSDA 361
L G + +V+ C L R L+
Sbjct: 400 VQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTI 459
Query: 362 GTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 460 PLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 514
>pdb|2GL7|A Chain A, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
pdb|2GL7|D Chain D, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
Length = 550
Score = 494 bits (1271), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/327 (75%), Positives = 271/327 (82%), Gaps = 13/327 (3%)
Query: 480 NLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 539
NLIN QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A
Sbjct: 2 NLINEQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSA 61
Query: 540 LVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAIT 599
+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAIT
Sbjct: 62 IVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAIT 121
Query: 600 TLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILA 659
TLHNLLLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILA
Sbjct: 122 TLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILA 181
Query: 660 SQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRL 719
S GP LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRL
Sbjct: 182 SGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRL 241
Query: 720 VQNCLWTLRNLSDAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV-------------T 766
VQNCLWTLRNLSDA TK +G DINV+TCAAG+
Sbjct: 242 VQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMM 301
Query: 767 VCQVGGVEALVQTIVNAGDREEITEPA 793
VCQVGG+EALV+T++ AGDRE+ITEPA
Sbjct: 302 VCQVGGIEALVRTVLRAGDREDITEPA 328
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 266/503 (52%), Positives = 316/503 (62%), Gaps = 55/503 (10%)
Query: 112 DQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHA 171
+QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V
Sbjct: 6 EQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRT 65
Query: 172 ISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHN 231
+ N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHN
Sbjct: 66 MQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHN 125
Query: 232 LLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGP 291
LLLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP
Sbjct: 126 LLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGP 185
Query: 292 VELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNC 351
LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNC
Sbjct: 186 QALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNC 245
Query: 352 LWTLRNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXX 400
LWTLRNLSDA TK V LL ++ N+ AAG+L L +
Sbjct: 246 LWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK-------- 297
Query: 401 XXXPLTDLLHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFD 457
++ + G+E L++ V C + T E + + +
Sbjct: 298 -----NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLH 352
Query: 458 TAQPTAVQRLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVV 510
P V+ L PS L A V LI + A L + AIP L++LL
Sbjct: 353 YGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL-------- 404
Query: 511 SQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGL 570
+ HQ +++ S M Q V + E +G G LH L+
Sbjct: 405 ----VRAHQDTQRRTS----MGGTQQ--QFVEGVRME---EIVEGCTGALHILARDVHNR 451
Query: 571 LAIFKSGGIPALVKLLSSPVESV 593
+ I IP V+LL SP+E++
Sbjct: 452 IVIRGLNTIPLFVQLLYSPIENI 474
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+EMAQNAVRL+YG+ +V L
Sbjct: 302 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 361
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 362 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 421
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 422 QQFVEGV 428
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 230/475 (48%), Gaps = 76/475 (16%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 57 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 116
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 117 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 172
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 173 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 230
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 231 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 283
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 284 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 341
Query: 281 SKL----IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 336
+++ + L PV +V+++ + L+ T +++ L++C +N + E G + L
Sbjct: 342 AEMAQNAVRLHYGLPV-VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRL 400
Query: 337 AMHL----------------------GHPSQRLVQNCLWTL-------------RNLSDA 361
L G + +V+ C L R L+
Sbjct: 401 VQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTI 460
Query: 362 GTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 461 PLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 515
>pdb|1T08|A Chain A, Crystal Structure Of Beta-CateninICAT HELICAL
DomainUNPHOSPHORYLATED APC R3
Length = 519
Score = 479 bits (1232), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/319 (74%), Positives = 264/319 (82%), Gaps = 13/319 (4%)
Query: 488 ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNS 547
A+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V + N+
Sbjct: 1 AELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNT 60
Query: 548 NDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLH 607
ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNLLLH
Sbjct: 61 NDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLH 120
Query: 608 QEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELV 667
QEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP LV
Sbjct: 121 QEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALV 180
Query: 668 RIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTL 727
IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCLWTL
Sbjct: 181 NIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTL 240
Query: 728 RNLSDAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV-------------TVCQVGGVE 774
RNLSDA TK +G DINV+TCAAG+ VCQVGG+E
Sbjct: 241 RNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIE 300
Query: 775 ALVQTIVNAGDREEITEPA 793
ALV+T++ AGDRE+ITEPA
Sbjct: 301 ALVRTVLRAGDREDITEPA 319
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 262/499 (52%), Positives = 311/499 (62%), Gaps = 55/499 (11%)
Query: 116 ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNS 175
A+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V + N+
Sbjct: 1 AELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNT 60
Query: 176 NDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLH 235
ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNLLLH
Sbjct: 61 NDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLH 120
Query: 236 QEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELV 295
QEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP LV
Sbjct: 121 QEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALV 180
Query: 296 RIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTL 355
IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCLWTL
Sbjct: 181 NIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTL 240
Query: 356 RNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXP 404
RNLSDA TK V LL ++ N+ AAG+L L +
Sbjct: 241 RNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK------------ 288
Query: 405 LTDLLHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFDTAQP 461
++ + G+E L++ V C + T E + + + P
Sbjct: 289 -NKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLP 347
Query: 462 TAVQRLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVVSQAA 514
V+ L PS L A V LI + A L + AIP L++LL
Sbjct: 348 VVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL------------ 395
Query: 515 MMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIF 574
+ HQ +++ S M Q + E +G G LH L+ + I
Sbjct: 396 VRAHQDTQRRTS----MGGTQQ-----QFVEGVRMEEIVEGCTGALHILARDVHNRIVIR 446
Query: 575 KSGGIPALVKLLSSPVESV 593
IP V+LL SP+E++
Sbjct: 447 GLNTIPLFVQLLYSPIENI 465
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+EMAQNAVRL+YG+ +V L
Sbjct: 293 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 352
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 353 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 412
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 413 QQFVEGV 419
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 229/478 (47%), Gaps = 82/478 (17%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 48 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 107
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 108 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 163
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 164 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 221
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 222 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 274
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 275 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 332
Query: 281 SKLIILASQGPVEL-------VRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGM 333
+++ +Q V L V+++ + L+ T +++ L++C +N + E G +
Sbjct: 333 AEM----AQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAI 388
Query: 334 QALAMHL----------------------GHPSQRLVQNCLWTL-------------RNL 358
L L G + +V+ C L R L
Sbjct: 389 PRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGL 448
Query: 359 SDAGTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
+ V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 449 NTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 506
>pdb|4DJS|A Chain A, Structure Of Beta-Catenin In Complex With A Stapled
Peptide Inhibitor
Length = 518
Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/317 (75%), Positives = 262/317 (82%), Gaps = 13/317 (4%)
Query: 490 LATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSND 549
LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V + N+ND
Sbjct: 1 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTND 60
Query: 550 LETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQE 609
+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNLLLHQE
Sbjct: 61 VETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQE 120
Query: 610 GSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRI 669
G+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP LV I
Sbjct: 121 GAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNI 180
Query: 670 MRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRN 729
MR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCLWTLRN
Sbjct: 181 MRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRN 240
Query: 730 LSDAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV-------------TVCQVGGVEAL 776
LSDA TK +G DINV+TCAAG+ VCQVGG+EAL
Sbjct: 241 LSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEAL 300
Query: 777 VQTIVNAGDREEITEPA 793
V+T++ AGDRE+ITEPA
Sbjct: 301 VRTVLRAGDREDITEPA 317
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 261/497 (52%), Positives = 309/497 (62%), Gaps = 55/497 (11%)
Query: 118 LATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSND 177
LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V + N+ND
Sbjct: 1 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTND 60
Query: 178 LETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQE 237
+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNLLLHQE
Sbjct: 61 VETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQE 120
Query: 238 GSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRI 297
G+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP LV I
Sbjct: 121 GAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNI 180
Query: 298 MRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRN 357
MR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCLWTLRN
Sbjct: 181 MRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRN 240
Query: 358 LSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLT 406
LSDA TK V LL ++ N+ AAG+L L +
Sbjct: 241 LSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK-------------N 287
Query: 407 DLLHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFDTAQPTA 463
++ + G+E L++ V C + T E + + + P
Sbjct: 288 KMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVV 347
Query: 464 VQRLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVVSQAAMM 516
V+ L PS L A V LI + A L + AIP L++LL +
Sbjct: 348 VKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL------------VR 395
Query: 517 VHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKS 576
HQ +++ S M Q + E +G G LH L+ + I
Sbjct: 396 AHQDTQRRTS----MGGTQQ-----QFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGL 446
Query: 577 GGIPALVKLLSSPVESV 593
IP V+LL SP+E++
Sbjct: 447 NTIPLFVQLLYSPIENI 463
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+EMAQNAVRL+YG+ +V L
Sbjct: 291 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 350
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 351 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 410
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 411 QQFVEGV 417
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 230/475 (48%), Gaps = 76/475 (16%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 46 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 105
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 106 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 161
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 162 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 219
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 220 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 272
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 273 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 330
Query: 281 SKL----IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 336
+++ + L PV +V+++ + L+ T +++ L++C +N + E G + L
Sbjct: 331 AEMAQNAVRLHYGLPV-VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRL 389
Query: 337 AMHL----------------------GHPSQRLVQNCLWTL-------------RNLSDA 361
L G + +V+ C L R L+
Sbjct: 390 VQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTI 449
Query: 362 GTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 450 PLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 504
>pdb|1LUJ|A Chain A, Crystal Structure Of The Beta-CateninICAT COMPLEX
Length = 514
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/315 (74%), Positives = 260/315 (82%), Gaps = 13/315 (4%)
Query: 492 TRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLE 551
TRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V + N+ND+E
Sbjct: 1 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVE 60
Query: 552 TTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGS 611
T + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNLLLHQEG+
Sbjct: 61 TARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGA 120
Query: 612 KMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMR 671
KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP LV IMR
Sbjct: 121 KMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMR 180
Query: 672 SYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 731
+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCLWTLRNLS
Sbjct: 181 TYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLS 240
Query: 732 DAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV-------------TVCQVGGVEALVQ 778
DA TK +G DINV+TCAAG+ VCQVGG+EALV+
Sbjct: 241 DAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVR 300
Query: 779 TIVNAGDREEITEPA 793
T++ AGDRE+ITEPA
Sbjct: 301 TVLRAGDREDITEPA 315
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 259/495 (52%), Positives = 307/495 (62%), Gaps = 55/495 (11%)
Query: 120 TRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLE 179
TRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V + N+ND+E
Sbjct: 1 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVE 60
Query: 180 TTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGS 239
T + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNLLLHQEG+
Sbjct: 61 TARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGA 120
Query: 240 KMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMR 299
KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP LV IMR
Sbjct: 121 KMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMR 180
Query: 300 SYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCLWTLRNLS
Sbjct: 181 TYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLS 240
Query: 360 DAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDL 408
DA TK V LL ++ N+ AAG+L L + +
Sbjct: 241 DAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK-------------NKM 287
Query: 409 LHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFDTAQPTAVQ 465
+ + G+E L++ V C + T E + + + P V+
Sbjct: 288 MVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVK 347
Query: 466 RLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVVSQAAMMVH 518
L PS L A V LI + A L + AIP L++LL + H
Sbjct: 348 LLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL------------VRAH 395
Query: 519 QLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGG 578
Q +++ S M Q + E +G G LH L+ + I
Sbjct: 396 QDTQRRTS----MGGTQQ-----QFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNT 446
Query: 579 IPALVKLLSSPVESV 593
IP V+LL SP+E++
Sbjct: 447 IPLFVQLLYSPIENI 461
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+EMAQNAVRL+YG+ +V L
Sbjct: 289 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 348
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 349 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 408
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 409 QQFVEGV 415
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 230/475 (48%), Gaps = 76/475 (16%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 44 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 103
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 104 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 159
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 160 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 217
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 218 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 270
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 271 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 328
Query: 281 SKL----IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 336
+++ + L PV +V+++ + L+ T +++ L++C +N + E G + L
Sbjct: 329 AEMAQNAVRLHYGLPV-VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRL 387
Query: 337 AMHL----------------------GHPSQRLVQNCLWTL-------------RNLSDA 361
L G + +V+ C L R L+
Sbjct: 388 VQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTI 447
Query: 362 GTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 448 PLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 502
>pdb|2BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 516
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/315 (74%), Positives = 260/315 (82%), Gaps = 13/315 (4%)
Query: 492 TRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLE 551
TRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V + N+ND+E
Sbjct: 1 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVE 60
Query: 552 TTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGS 611
T + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNLLLHQEG+
Sbjct: 61 TARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGA 120
Query: 612 KMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMR 671
KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP LV IMR
Sbjct: 121 KMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMR 180
Query: 672 SYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 731
+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCLWTLRNLS
Sbjct: 181 TYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLS 240
Query: 732 DAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV-------------TVCQVGGVEALVQ 778
DA TK +G DINV+TCAAG+ VCQVGG+EALV+
Sbjct: 241 DAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVR 300
Query: 779 TIVNAGDREEITEPA 793
T++ AGDRE+ITEPA
Sbjct: 301 TVLRAGDREDITEPA 315
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 259/495 (52%), Positives = 307/495 (62%), Gaps = 55/495 (11%)
Query: 120 TRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLE 179
TRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V + N+ND+E
Sbjct: 1 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVE 60
Query: 180 TTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGS 239
T + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNLLLHQEG+
Sbjct: 61 TARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGA 120
Query: 240 KMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMR 299
KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP LV IMR
Sbjct: 121 KMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMR 180
Query: 300 SYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCLWTLRNLS
Sbjct: 181 TYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLS 240
Query: 360 DAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDL 408
DA TK V LL ++ N+ AAG+L L + +
Sbjct: 241 DAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYK-------------NKM 287
Query: 409 LHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFDTAQPTAVQ 465
+ + G+E L++ V C + T E + + + P V+
Sbjct: 288 MVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVK 347
Query: 466 RLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKLLNDEDQVVVSQAAMMVH 518
L PS L A V LI + A L + AIP L++LL + H
Sbjct: 348 LLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLL------------VRAH 395
Query: 519 QLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGG 578
Q +++ S M Q + E +G G LH L+ + I
Sbjct: 396 QDTQRRTS----MGGTQQ-----QFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNT 446
Query: 579 IPALVKLLSSPVESV 593
IP V+LL SP+E++
Sbjct: 447 IPLFVQLLYSPIENI 461
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+EMAQNAVRL+YG+ +V L
Sbjct: 289 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 348
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 349 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 408
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 409 QQFVEGV 415
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 230/475 (48%), Gaps = 76/475 (16%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 44 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 103
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + +++L +
Sbjct: 104 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----DCLQILAYGN 159
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ +++ E + + + V LS +++ AI+ + M A
Sbjct: 160 QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGMQAL 217
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G+ G + LV+LL S +V+
Sbjct: 218 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEGM-----EGLLGTLVQLLGSDDINVVTC 270
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +KM V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 271 AAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 328
Query: 281 SKL----IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 336
+++ + L PV +V+++ + L+ T +++ L++C +N + E G + L
Sbjct: 329 AEMAQNAVRLHYGLPV-VVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRL 387
Query: 337 AMHL----------------------GHPSQRLVQNCLWTL-------------RNLSDA 361
L G + +V+ C L R L+
Sbjct: 388 VQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTI 447
Query: 362 GTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 448 PLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 502
>pdb|3IFQ|A Chain A, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
pdb|3IFQ|B Chain B, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
Length = 553
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/332 (68%), Positives = 261/332 (78%), Gaps = 13/332 (3%)
Query: 475 KHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSP 534
K A+V+LINYQDDA+LATRA+PEL KLLNDED VVV++AAM+V+QLSKKEASR A+M SP
Sbjct: 1 KSAIVHLINYQDDAELATRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSP 60
Query: 535 QMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVL 594
Q+VAA+V + N++DL+T + LHNLSHHR+GLLAIFKSGGIPALV++LSSPVESVL
Sbjct: 61 QLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVL 120
Query: 595 FYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESK 654
FYAITTLHNLLL+QEG+KMAVRLA GLQKMV LL +NN KFLAI TDCLQ+LAYGNQESK
Sbjct: 121 FYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESK 180
Query: 655 LIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGH 714
LIILA+ GP LV+IMR+Y YEKLLW TSRVLKVLSVC SNKPAIVEAGGMQAL HL
Sbjct: 181 LIILANGGPQALVQIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLTS 240
Query: 715 PSQRLVQNCLWTLRNLSDAGTKVDGXXXXXXXXXXXXXXXDINVITCAAG---------- 764
S RLVQNCLWTLRNLSD TK +G D+NV+TCA G
Sbjct: 241 NSPRLVQNCLWTLRNLSDVATKQEGLESVLKILVNQLSVDDVNVLTCATGTLSNLTCNNS 300
Query: 765 ---VTVCQVGGVEALVQTIVNAGDREEITEPA 793
V Q GVEAL+ I+ AGD+++ITEPA
Sbjct: 301 KNKTLVTQNSGVEALIHAILRAGDKDDITEPA 332
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 263/540 (48%), Positives = 319/540 (59%), Gaps = 56/540 (10%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
QDDA+LATRA+PEL KLLNDED VVV++AAM+V+QLSKKEASR A+M SPQ+VAA+V +
Sbjct: 11 QDDAELATRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVAAVVRTM 70
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
N++DL+T + LHNLSHHR+GLLAIFKSGGIPALV++LSSPVESVLFYAITTLHNL
Sbjct: 71 QNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVLFYAITTLHNL 130
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 292
LL+QEG+KMAVRLA GLQKMV LL +NN KFLAI TDCLQ+LAYGNQESKLIILA+ GP
Sbjct: 131 LLYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQ 190
Query: 293 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 352
LV+IMR+Y YEKLLW TSRVLKVLSVC SNKPAIVEAGGMQAL HL S RLVQNCL
Sbjct: 191 ALVQIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLTSNSPRLVQNCL 250
Query: 353 WTLRNLSDAGTK-------VSLLFNEIE----NIQRVAAGLLCELAQDKXXXXXXXXXXX 401
WTLRNLSD TK + +L N++ N+ A G L L +
Sbjct: 251 WTLRNLSDVATKQEGLESVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSK--------- 301
Query: 402 XXPLTDLLHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEGIEIPSTQFDT 458
L ++N GVE LI + C + T E + S + +
Sbjct: 302 ----NKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNY 357
Query: 459 AQPTAVQRLTEPSQM-LKHAVVNLINY-----QDDADLATRA-IPELIKLLNDEDQVVVS 511
P V+ L +P+Q L A + LI + A L A IP L++LL
Sbjct: 358 GIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLL--------- 408
Query: 512 QAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLL 571
+ HQ +A RH + Q V E +G G LH L+ +
Sbjct: 409 ---VKAHQ----DAQRHVAAGTQQPYTDGVRM------EEIVEGCTGALHILARDPMNRM 455
Query: 572 AIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRN 631
IF+ IP V+LL S VE++ A L L +E + M LL RN
Sbjct: 456 EIFRLNTIPLFVQLLYSSVENIQRVAAGVLCELAQDKEAADAIDAEGASAPLMELLHSRN 515
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 89/112 (79%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
V Q GVEAL+ I+ AGD+++ITEPAVCALRHLTSRH E+EMAQN+VRLNYGI IV L
Sbjct: 306 VTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKL 365
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQR 964
LN P++WPLVKA IGLIRNLALC ANHAPL+E I LV LL +A D QR
Sbjct: 366 LNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQR 417
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 227/470 (48%), Gaps = 69/470 (14%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTLVT-- 59
++VAA+V + N++DL+T + LHNLSHHR+GLLAIFKSGGIPALV++LS + +
Sbjct: 61 QLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVESVL 120
Query: 60 ----ASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A +A R + +++ LLN + + T + ++LL +
Sbjct: 121 FYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITT----DCLQLLAYGN 176
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A+ +A+ ++++ + E + + + V LS +++ AI+ + M A
Sbjct: 177 QESKLIILANGGPQALVQIMRNYSYEKLLWTTSRVLKV--LSVCPSNKPAIVEAGGMQAL 234
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
H SNS L + + TL NLS ++GL ++ K LV LS +VL
Sbjct: 235 GKHLTSNSPRL--VQNCLWTLRNLSDVATKQEGLESVLK-----ILVNQLSVDDVNVLTC 287
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQKMV--LLLGRNNVKFLAIVTDCLQILAYGNQESK 282
A TL NL + +K V G++ ++ +L + L+ L + E++
Sbjct: 288 ATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAE 347
Query: 283 LI---ILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAM- 338
+ + + G +V+++ + L+ T +++ L++C +N + EA + L
Sbjct: 348 MAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQL 407
Query: 339 ----------HLGHPSQR----------LVQNCLWTLRNLS-DAGTK------------V 365
H+ +Q+ +V+ C L L+ D + V
Sbjct: 408 LVKAHQDAQRHVAAGTQQPYTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFV 467
Query: 366 SLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEG 415
LL++ +ENIQRVAAG+LCELAQDK PL +LLHSRNEG
Sbjct: 468 QLLYSSVENIQRVAAGVLCELAQDKEAADAIDAEGASAPLMELLHSRNEG 517
>pdb|3BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 470
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/272 (71%), Positives = 213/272 (78%), Gaps = 13/272 (4%)
Query: 535 QMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVL 594
Q V+A+V N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK L SPV+SVL
Sbjct: 1 QXVSAIVRTXQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKXLGSPVDSVL 60
Query: 595 FYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESK 654
FYAITTLHNLLLHQEG+K AVRLAGGLQK V LL + NVKFLAI TDCLQILAYGNQESK
Sbjct: 61 FYAITTLHNLLLHQEGAKXAVRLAGGLQKXVALLNKTNVKFLAITTDCLQILAYGNQESK 120
Query: 655 LIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGH 714
LIILAS GP LV I R+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGG QAL +HL
Sbjct: 121 LIILASGGPQALVNIXRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGXQALGLHLTD 180
Query: 715 PSQRLVQNCLWTLRNLSDAGTKVDGXXXXXXXXXXXXXXXDINVITCAAGV--------- 765
PSQRLVQNCLWTLRNLSDA TK +G DINV+TCAAG+
Sbjct: 181 PSQRLVQNCLWTLRNLSDAATKQEGXEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNY 240
Query: 766 ----TVCQVGGVEALVQTIVNAGDREEITEPA 793
VCQVGG+EALV+T++ AGDRE+ITEPA
Sbjct: 241 KNKXXVCQVGGIEALVRTVLRAGDREDITEPA 272
Score = 336 bits (861), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 218/452 (48%), Positives = 257/452 (56%), Gaps = 55/452 (12%)
Query: 163 QMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVL 222
Q V+A+V N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK L SPV+SVL
Sbjct: 1 QXVSAIVRTXQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKXLGSPVDSVL 60
Query: 223 FYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESK 282
FYAITTLHNLLLHQEG+K AVRLAGGLQK V LL + NVKFLAI TDCLQILAYGNQESK
Sbjct: 61 FYAITTLHNLLLHQEGAKXAVRLAGGLQKXVALLNKTNVKFLAITTDCLQILAYGNQESK 120
Query: 283 LIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGH 342
LIILAS GP LV I R+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGG QAL +HL
Sbjct: 121 LIILASGGPQALVNIXRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGXQALGLHLTD 180
Query: 343 PSQRLVQNCLWTLRNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQDKX 391
PSQRLVQNCLWTLRNLSDA TK V LL ++ N+ AAG+L L +
Sbjct: 181 PSQRLVQNCLWTLRNLSDAATKQEGXEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNY 240
Query: 392 XXXXXXXXXXXXPLTDLLHSRNEGVEILIQGVXXXXXXXXXXXXRGCLMFPET---LEEG 448
G+E L++ V C + T E
Sbjct: 241 KNKXXVCQVG-------------GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAE 287
Query: 449 IEIPSTQFDTAQPTAVQRLTEPSQM-LKHAVVNLINY-----QDDADLATR-AIPELIKL 501
+ + P V+ L PS L A V LI + A L + AIP L++L
Sbjct: 288 XAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQL 347
Query: 502 LNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLH 561
L + HQ +++ S M Q + E +G G LH
Sbjct: 348 L------------VRAHQDTQRRTS----MGGTQQ-----QFVEGVRXEEIVEGCTGALH 386
Query: 562 NLSHHRQGLLAIFKSGGIPALVKLLSSPVESV 593
L+ + I IP V+LL SP+E++
Sbjct: 387 ILARDVHNRIVIRGLNTIPLFVQLLYSPIENI 418
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/127 (68%), Positives = 103/127 (81%)
Query: 853 VCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNL 912
VCQVGG+EALV+T++ AGDRE+ITEPA+CALRHLTSRH E+E AQNAVRL+YG+ +V L
Sbjct: 246 VCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEXAQNAVRLHYGLPVVVKL 305
Query: 913 LNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFF 972
L+PPS WPL+KA +GLIRNLALC ANHAPLRE GAI LV LL RA DTQR + G
Sbjct: 306 LHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 365
Query: 973 RSFLGGV 979
+ F+ GV
Sbjct: 366 QQFVEGV 372
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 219/478 (45%), Gaps = 82/478 (17%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+ V+A+V N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK L +
Sbjct: 1 QXVSAIVRTXQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKXLGSPVDSVL 60
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
+ +N L+ Q+ A A R + + + LLN + + T + +++L +
Sbjct: 61 FYAITTLHNLLLHQEGAKXAVRLAGGLQKXVALLNKTNVKFLAITT----DCLQILAYGN 116
Query: 113 QDD-----ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAA 167
Q+ A +A+ + + E + + + V LS +++ AI+ + A
Sbjct: 117 QESKLIILASGGPQALVNIXRTYTYEKLLWTTSRVLKV--LSVCSSNKPAIVEAGGXQAL 174
Query: 168 LVHAISNSNDLETTKGAVGTLHNLSH---HRQGLLAIFKSGGIPALVKLLSSPVESVLFY 224
+H S L + + TL NLS ++G G + LV+LL S +V+
Sbjct: 175 GLHLTDPSQRL--VQNCLWTLRNLSDAATKQEG-----XEGLLGTLVQLLGSDDINVVTC 227
Query: 225 AITTLHNLLLHQEGSKMAVRLAGGLQ---KMVLLLG-RNNVKFLAIVTDCLQILAYGNQE 280
A L NL + +K V GG++ + VL G R ++ AI L+ L +QE
Sbjct: 228 AAGILSNLTCNNYKNKXXVCQVGGIEALVRTVLRAGDREDITEPAICA--LRHLTSRHQE 285
Query: 281 SKLIILASQGPVEL-------VRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGM 333
++ +Q V L V+++ + L+ T +++ L++C +N + E G +
Sbjct: 286 AE----XAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAI 341
Query: 334 QALAMHL----------------------GHPSQRLVQNCLWTL-------------RNL 358
L L G + +V+ C L R L
Sbjct: 342 PRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRXEEIVEGCTGALHILARDVHNRIVIRGL 401
Query: 359 SDAGTKVSLLFNEIENIQRVAAGLLCELAQDKXXXXXXXXXXXXXPLTDLLHSRNEGV 416
+ V LL++ IENIQRVAAG+LCELAQDK PLT+LLHSRNEGV
Sbjct: 402 NTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV 459
>pdb|3SLA|A Chain A, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|B Chain B, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|C Chain C, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|D Chain D, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|E Chain E, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
Length = 168
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 137/166 (82%), Positives = 152/166 (91%)
Query: 483 NYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVH 542
NYQDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V
Sbjct: 3 NYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVR 62
Query: 543 AISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLH 602
+ N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLH
Sbjct: 63 TMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLH 122
Query: 603 NLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAY 648
NLLLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAY
Sbjct: 123 NLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAY 168
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/164 (82%), Positives = 150/164 (91%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V +
Sbjct: 5 QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTM 64
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNL
Sbjct: 65 QNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 124
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAY 276
LLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAY
Sbjct: 125 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAY 168
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 65/98 (66%), Gaps = 9/98 (9%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 55 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 114
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDED 90
+ +N L+ Q+ A +A R + +++ LLN +
Sbjct: 115 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTN 152
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 284 IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHP 343
I+ + Q +VR M++ + + CT+ L LS AI ++GG+ AL LG P
Sbjct: 50 IMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSP 109
Query: 344 SQRLVQNCLWTLRNL 358
++ + TL NL
Sbjct: 110 VDSVLFYAITTLHNL 124
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 656 IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHP 715
I+ + Q +VR M++ + + CT+ L LS AI ++GG+ AL LG P
Sbjct: 50 IMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSP 109
Query: 716 SQRLVQNCLWTLRNL 730
++ + TL NL
Sbjct: 110 VDSVLFYAITTLHNL 124
>pdb|3SL9|A Chain A, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|B Chain B, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|E Chain E, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|G Chain G, X-Ray Structure Of Beta Catenin In Complex With Bcl9
Length = 167
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 136/165 (82%), Positives = 151/165 (91%)
Query: 483 NYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVH 542
NYQDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V
Sbjct: 3 NYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVR 62
Query: 543 AISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLH 602
+ N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLH
Sbjct: 63 TMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLH 122
Query: 603 NLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILA 647
NLLLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILA
Sbjct: 123 NLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILA 167
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/163 (82%), Positives = 149/163 (91%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V +
Sbjct: 5 QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTM 64
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNL
Sbjct: 65 QNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 124
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILA 275
LLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILA
Sbjct: 125 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILA 167
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 65/98 (66%), Gaps = 9/98 (9%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTL---- 57
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L +
Sbjct: 55 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 114
Query: 58 --VTASSNNTLILQDDADLATR---AIPELIKLLNDED 90
+ +N L+ Q+ A +A R + +++ LLN +
Sbjct: 115 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTN 152
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 284 IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHP 343
I+ + Q +VR M++ + + CT+ L LS AI ++GG+ AL LG P
Sbjct: 50 IMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSP 109
Query: 344 SQRLVQNCLWTLRNL 358
++ + TL NL
Sbjct: 110 VDSVLFYAITTLHNL 124
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 656 IILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHP 715
I+ + Q +VR M++ + + CT+ L LS AI ++GG+ AL LG P
Sbjct: 50 IMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSP 109
Query: 716 SQRLVQNCLWTLRNL 730
++ + TL NL
Sbjct: 110 VDSVLFYAITTLHNL 124
>pdb|4DB8|A Chain A, Designed Armadillo-Repeat Protein
pdb|4DB8|B Chain B, Designed Armadillo-Repeat Protein
pdb|4DB8|C Chain C, Designed Armadillo-Repeat Protein
pdb|4DB8|D Chain D, Designed Armadillo-Repeat Protein
Length = 252
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 162 PQMVAALVHAISNSNDLETTKGAVGTLHN-LSHHRQGLLAIFKSGGIPALVKLLSSPVES 220
PQM L NS+D++ A LS + + A+ +G +PALV+LLSSP E
Sbjct: 15 PQMTQQL-----NSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQ 69
Query: 221 VLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCL-QILAYGNQ 279
+L A+ L N+ AV AG L +V LL N + L L I + GN+
Sbjct: 70 ILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE 129
Query: 280 ESKLIILASQGPVELVRIMRSYDYEKL---LWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 336
+ + +I A P LV+++ S + + L LW S + S + A+++AG + AL
Sbjct: 130 QIQAVIDAGALPA-LVQLLSSPNEQILQEALWALSN---IASGGNEQIQAVIDAGALPAL 185
Query: 337 AMHLGHPSQRLVQNCLWTLRNLSDAGTK 364
L P+++++Q LW L N++ G +
Sbjct: 186 VQLLSSPNEQILQEALWALSNIASGGNE 213
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 534 PQMVAALVHAISNSNDLETTKGAVGTLHN-LSHHRQGLLAIFKSGGIPALVKLLSSPVES 592
PQM L NS+D++ A LS + + A+ +G +PALV+LLSSP E
Sbjct: 15 PQMTQQL-----NSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQ 69
Query: 593 VLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCL-QILAYGNQ 651
+L A+ L N+ AV AG L +V LL N + L L I + GN+
Sbjct: 70 ILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE 129
Query: 652 ESKLIILASQGPVELVRIMRSYDYEKL---LWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 708
+ + +I A P LV+++ S + + L LW S + S + A+++AG + AL
Sbjct: 130 QIQAVIDAGALPA-LVQLLSSPNEQILQEALWALSN---IASGGNEQIQAVIDAGALPAL 185
Query: 709 AMHLGHPSQRLVQNCLWTLRNLSDAGTK 736
L P+++++Q LW L N++ G +
Sbjct: 186 VQLLSSPNEQILQEALWALSNIASGGNE 213
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 120/230 (52%), Gaps = 7/230 (3%)
Query: 79 IPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVV 138
+P++ + LN +D + ATR +++ N++ Q A + A+P L++LL+ ++ ++
Sbjct: 14 LPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQ--AVIDAGALPALVQLLSSPNEQIL 71
Query: 139 SQAAMMVHQLSKKEASR-HAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQ 196
+A + ++ + A++++ + ALV +S+ N+ + + A+ L N+ S +
Sbjct: 72 QEALWALSNIASGGNEQIQAVIDAG-ALPALVQLLSSPNE-QILQEALWALSNIASGGNE 129
Query: 197 GLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLL 256
+ A+ +G +PALV+LLSSP E +L A+ L N+ AV AG L +V LL
Sbjct: 130 QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLL 189
Query: 257 GRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKL 306
N + L L +A G E K + + G +E + ++S++ EK+
Sbjct: 190 SSPNEQILQEALWALSNIASGGNEQKQAVKEA-GALEKLEQLQSHENEKI 238
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 38/264 (14%)
Query: 13 NSNDLETTKGAVGTLHN-LSHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTLILQDD 71
NS+D++ A LS + + A+ +G +PALV+LL SS N ILQ+
Sbjct: 22 NSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLL-------SSPNEQILQE- 73
Query: 72 ADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLN 131
A A+ + N++ Q A + A+P L++LL+ ++ A A+ + N
Sbjct: 74 ---ALWALSNIASGGNEQIQ--AVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN 128
Query: 132 DEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNL 191
++ Q V+ A+ ALV +S+ N+ + + A+ L N+
Sbjct: 129 EQIQAVIDAGAL----------------------PALVQLLSSPNE-QILQEALWALSNI 165
Query: 192 -SHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQ 250
S + + A+ +G +PALV+LLSSP E +L A+ L N+ K AV+ AG L+
Sbjct: 166 ASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALE 225
Query: 251 KMVLLLGRNNVKFLAIVTDCLQIL 274
K+ L N K + L+ L
Sbjct: 226 KLEQLQSHENEKIQKEAQEALEKL 249
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 32/263 (12%)
Query: 101 IPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMN 160
+P++ + LN +D + ATR +++ N++ Q V+ A+
Sbjct: 14 LPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGAL----------------- 56
Query: 161 SPQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVE 219
ALV +S+ N+ + + A+ L N+ S + + A+ +G +PALV+LLSSP E
Sbjct: 57 -----PALVQLLSSPNE-QILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNE 110
Query: 220 SVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCL-QILAYGN 278
+L A+ L N+ AV AG L +V LL N + L L I + GN
Sbjct: 111 QILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN 170
Query: 279 QESKLIILASQGPVELVRIMRSYDYEKL---LWCTSRVLKVLSVCSSNKPAIVEAGGMQA 335
++ + +I A P LV+++ S + + L LW S + S + K A+ EAG ++
Sbjct: 171 EQIQAVIDAGALPA-LVQLLSSPNEQILQEALWALSN---IASGGNEQKQAVKEAGALEK 226
Query: 336 LAMHLGHPSQRLVQNCLWTLRNL 358
L H ++++ + L L
Sbjct: 227 LEQLQSHENEKIQKEAQEALEKL 249
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 12/242 (4%)
Query: 495 IPELIKLLNDED-QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETT 553
+P++ + LN +D Q +S LS A++++ + ALV +S+ N+ +
Sbjct: 14 LPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAG-ALPALVQLLSSPNE-QIL 71
Query: 554 KGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSK 612
+ A+ L N+ S + + A+ +G +PALV+LLSSP E +L A+ L N+
Sbjct: 72 QEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQI 131
Query: 613 MAVRLAGGLQKMVLLLGRNNVKFLAIVTDCL-QILAYGNQESKLIILASQGPVELVRIMR 671
AV AG L +V LL N + L L I + GN++ + +I A P LV+++
Sbjct: 132 QAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPA-LVQLLS 190
Query: 672 SYDYEKL---LWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLR 728
S + + L LW S + S + K A+ EAG ++ L H ++++ + L
Sbjct: 191 SPNEQILQEALWALSN---IASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALE 247
Query: 729 NL 730
L
Sbjct: 248 KL 249
>pdb|4DB6|A Chain A, Designed Armadillo Repeat Protein (Yiiim3aii)
Length = 210
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 105/198 (53%), Gaps = 6/198 (3%)
Query: 79 IPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVV 138
+P++++ LN DQ + A R + ++ N++ Q A + A+P L++LL+ ++ ++
Sbjct: 14 LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQ--AVIDAGALPALVQLLSSPNEQIL 71
Query: 139 SQAAMMVHQLSKKEASR-HAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQ 196
+A + ++ + A++++ + ALV +S+ N+ + + A+ L N+ S +
Sbjct: 72 QEALWALSNIASGGNEQIQAVIDAG-ALPALVQLLSSPNE-QILQEALWALSNIASGGNE 129
Query: 197 GLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLL 256
+ A+ +G +PALV+LLSSP E +L A+ L N+ K AV+ AG L+K+ L
Sbjct: 130 QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQ 189
Query: 257 GRNNVKFLAIVTDCLQIL 274
N K + L+ L
Sbjct: 190 SHENEKIQKEAQEALEKL 207
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 101 IPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMN 160
+P++++ LN DQ + A R + ++ N++ Q V+ A+
Sbjct: 14 LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGAL----------------- 56
Query: 161 SPQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVE 219
ALV +S+ N+ + + A+ L N+ S + + A+ +G +PALV+LLSSP E
Sbjct: 57 -----PALVQLLSSPNE-QILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNE 110
Query: 220 SVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQ 279
+L A+ L N+ AV AG L +V LL N + L L +A G
Sbjct: 111 QILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN 170
Query: 280 ESKLIILASQGPVELVRIMRSYDYEKL 306
E K + + G +E + ++S++ EK+
Sbjct: 171 EQKQAVKEA-GALEKLEQLQSHENEKI 196
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 162 PQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVES 220
PQMV L NS D + + A+ L + S + + A+ +G +PALV+LLSSP E
Sbjct: 15 PQMVQQL-----NSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQ 69
Query: 221 VLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCL-QILAYGNQ 279
+L A+ L N+ AV AG L +V LL N + L L I + GN+
Sbjct: 70 ILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE 129
Query: 280 ESKLIILASQGPVELVRIMRSYDYEKL---LWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 336
+ + +I A P LV+++ S + + L LW S + S + K A+ EAG ++ L
Sbjct: 130 QIQAVIDAGALPA-LVQLLSSPNEQILQEALWALSN---IASGGNEQKQAVKEAGALEKL 185
Query: 337 AMHLGHPSQRLVQNCLWTLRNL 358
H ++++ + L L
Sbjct: 186 EQLQSHENEKIQKEAQEALEKL 207
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 534 PQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVES 592
PQMV L NS D + + A+ L + S + + A+ +G +PALV+LLSSP E
Sbjct: 15 PQMVQQL-----NSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQ 69
Query: 593 VLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCL-QILAYGNQ 651
+L A+ L N+ AV AG L +V LL N + L L I + GN+
Sbjct: 70 ILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE 129
Query: 652 ESKLIILASQGPVELVRIMRSYDYEKL---LWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 708
+ + +I A P LV+++ S + + L LW S + S + K A+ EAG ++ L
Sbjct: 130 QIQAVIDAGALPA-LVQLLSSPNEQILQEALWALSN---IASGGNEQKQAVKEAGALEKL 185
Query: 709 AMHLGHPSQRLVQNCLWTLRNL 730
H ++++ + L L
Sbjct: 186 EQLQSHENEKIQKEAQEALEKL 207
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 26/146 (17%)
Query: 13 NSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTLILQD- 70
NS D + + A+ L + S + + A+ +G +PALV+LL SS N ILQ+
Sbjct: 22 NSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLL-------SSPNEQILQEA 74
Query: 71 ---------------DADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDD 115
A + A+P L++LL+ ++ A A+ + N++ Q
Sbjct: 75 LWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ-- 132
Query: 116 ADLATRAIPELIKLLNDEDQVVVSQA 141
A + A+P L++LL+ ++ ++ +A
Sbjct: 133 AVIDAGALPALVQLLSSPNEQILQEA 158
>pdb|4DBA|A Chain A, Designed Armadillo Repeat Protein (Yiim3aii)
pdb|4DBA|B Chain B, Designed Armadillo Repeat Protein (Yiim3aii)
pdb|4DBA|C Chain C, Designed Armadillo Repeat Protein (Yiim3aii)
pdb|4DBA|D Chain D, Designed Armadillo Repeat Protein (Yiim3aii)
Length = 210
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 105/198 (53%), Gaps = 6/198 (3%)
Query: 79 IPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVV 138
+P++ + LN +D + ATR +++ N++ Q A + A+P L++LL+ ++ ++
Sbjct: 14 LPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQ--AVIDAGALPALVQLLSSPNEQIL 71
Query: 139 SQAAMMVHQLSKKEASR-HAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQ 196
+A + ++ + A++++ + ALV +S+ N+ + + A+ L N+ S +
Sbjct: 72 QEALWALSNIASGGNEQIQAVIDAG-ALPALVQLLSSPNE-QILQEALWALSNIASGGNE 129
Query: 197 GLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLL 256
+ A+ +G +PALV+LLSSP E +L A+ L N+ K AV+ AG L+K+ L
Sbjct: 130 QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQ 189
Query: 257 GRNNVKFLAIVTDCLQIL 274
N K + L+ L
Sbjct: 190 SHENEKIQKEAQEALEKL 207
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 162 PQMVAALVHAISNSNDLETTKGAVGTLHN-LSHHRQGLLAIFKSGGIPALVKLLSSPVES 220
PQM L NS+D++ A LS + + A+ +G +PALV+LLSSP E
Sbjct: 15 PQMTQQL-----NSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQ 69
Query: 221 VLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCL-QILAYGNQ 279
+L A+ L N+ AV AG L +V LL N + L L I + GN+
Sbjct: 70 ILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE 129
Query: 280 ESKLIILASQGPVELVRIMRSYDYEKL---LWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 336
+ + +I A P LV+++ S + + L LW S + S + K A+ EAG ++ L
Sbjct: 130 QIQAVIDAGALPA-LVQLLSSPNEQILQEALWALSN---IASGGNEQKQAVKEAGALEKL 185
Query: 337 AMHLGHPSQRLVQNCLWTLRNL 358
H ++++ + L L
Sbjct: 186 EQLQSHENEKIQKEAQEALEKL 207
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 534 PQMVAALVHAISNSNDLETTKGAVGTLHN-LSHHRQGLLAIFKSGGIPALVKLLSSPVES 592
PQM L NS+D++ A LS + + A+ +G +PALV+LLSSP E
Sbjct: 15 PQMTQQL-----NSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQ 69
Query: 593 VLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCL-QILAYGNQ 651
+L A+ L N+ AV AG L +V LL N + L L I + GN+
Sbjct: 70 ILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE 129
Query: 652 ESKLIILASQGPVELVRIMRSYDYEKL---LWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 708
+ + +I A P LV+++ S + + L LW S + S + K A+ EAG ++ L
Sbjct: 130 QIQAVIDAGALPA-LVQLLSSPNEQILQEALWALSN---IASGGNEQKQAVKEAGALEKL 185
Query: 709 AMHLGHPSQRLVQNCLWTLRNL 730
H ++++ + L L
Sbjct: 186 EQLQSHENEKIQKEAQEALEKL 207
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 101 IPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMN 160
+P++ + LN +D + ATR +++ N++ Q V+ A+
Sbjct: 14 LPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGAL----------------- 56
Query: 161 SPQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVE 219
ALV +S+ N+ + + A+ L N+ S + + A+ +G +PALV+LLSSP E
Sbjct: 57 -----PALVQLLSSPNE-QILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNE 110
Query: 220 SVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQ 279
+L A+ L N+ AV AG L +V LL N + L L +A G
Sbjct: 111 QILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN 170
Query: 280 ESKLIILASQGPVELVRIMRSYDYEKL 306
E K + + G +E + ++S++ EK+
Sbjct: 171 EQKQAVKEA-GALEKLEQLQSHENEKI 196
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 26/146 (17%)
Query: 13 NSNDLETTKGAVGTLHN-LSHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTLILQD- 70
NS+D++ A LS + + A+ +G +PALV+LL SS N ILQ+
Sbjct: 22 NSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLL-------SSPNEQILQEA 74
Query: 71 ---------------DADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDD 115
A + A+P L++LL+ ++ A A+ + N++ Q
Sbjct: 75 LWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ-- 132
Query: 116 ADLATRAIPELIKLLNDEDQVVVSQA 141
A + A+P L++LL+ ++ ++ +A
Sbjct: 133 AVIDAGALPALVQLLSSPNEQILQEA 158
>pdb|4HXT|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or329
Length = 252
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 2/241 (0%)
Query: 123 IPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTK 182
+ +L+KLL D +AA + +++ AS + V LV ++ S D E K
Sbjct: 4 VEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLT-STDSEVQK 62
Query: 183 GAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKM 241
A L N+ S + + AI +GG+ LVKLL+S V A L N+ + +
Sbjct: 63 EAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIK 122
Query: 242 AVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSY 301
A+ AGG++ +V LL + + L +A G E+ I+ + G LV+++ S
Sbjct: 123 AIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST 182
Query: 302 DYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDA 361
D E + + S +S AIV+AGG++ L L + + L N+
Sbjct: 183 DSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRALENIKSG 242
Query: 362 G 362
G
Sbjct: 243 G 243
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 2/241 (0%)
Query: 495 IPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTK 554
+ +L+KLL D +AA + +++ AS + V LV ++ S D E K
Sbjct: 4 VEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLT-STDSEVQK 62
Query: 555 GAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKM 613
A L N+ S + + AI +GG+ LVKLL+S V A L N+ + +
Sbjct: 63 EAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIK 122
Query: 614 AVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSY 673
A+ AGG++ +V LL + + L +A G E+ I+ + G LV+++ S
Sbjct: 123 AIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST 182
Query: 674 DYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDA 733
D E + + S +S AIV+AGG++ L L + + L N+
Sbjct: 183 DSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRALENIKSG 242
Query: 734 G 734
G
Sbjct: 243 G 243
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 1/191 (0%)
Query: 174 NSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
S D ET K A L + S + AI +GG+ LVKLL+S V A L N+
Sbjct: 12 TSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANI 71
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 292
+ + A+ AGG++ +V LL + + L +A G E+ I+ + G
Sbjct: 72 ASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVE 131
Query: 293 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 352
LV+++ S D E + + S AIV+AGG++ L L + +
Sbjct: 132 VLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAA 191
Query: 353 WTLRNLSDAGT 363
L N++ T
Sbjct: 192 RALANIASGPT 202
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 1/191 (0%)
Query: 546 NSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 604
S D ET K A L + S + AI +GG+ LVKLL+S V A L N+
Sbjct: 12 TSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANI 71
Query: 605 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 664
+ + A+ AGG++ +V LL + + L +A G E+ I+ + G
Sbjct: 72 ASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVE 131
Query: 665 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 724
LV+++ S D E + + S AIV+AGG++ L L + +
Sbjct: 132 VLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAA 191
Query: 725 WTLRNLSDAGT 735
L N++ T
Sbjct: 192 RALANIASGPT 202
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 101/239 (42%), Gaps = 30/239 (12%)
Query: 13 NSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTLILQDD 71
S D ET K A L + S + AI +GG+ LVKLL+ T L +
Sbjct: 12 TSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANI 71
Query: 72 A---DLATRAIPE------LIKLLNDEDQDDADLATRAIP-------ELIKLLNDEDQDD 115
A D A +AI + L+KLL D + A RA+ E IK + D
Sbjct: 72 ASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVD----- 126
Query: 116 ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQL-SKKEASRHAIMNSPQMVAALVHAISN 174
+ L+KLL D V +AA + + S + + AI+++ V LV ++
Sbjct: 127 ----AGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGG-VEVLVKLLT- 180
Query: 175 SNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
S D E K A L N+ S + AI +GG+ L KLL+S V A L N+
Sbjct: 181 STDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRALENI 239
>pdb|4DB9|A Chain A, Designed Armadillo Repeat Protein (Yiiim3aiii)
pdb|4DB9|B Chain B, Designed Armadillo Repeat Protein (Yiiim3aiii)
pdb|4DB9|C Chain C, Designed Armadillo Repeat Protein (Yiiim3aiii)
pdb|4DB9|D Chain D, Designed Armadillo Repeat Protein (Yiiim3aiii)
pdb|4DB9|E Chain E, Designed Armadillo Repeat Protein (Yiiim3aiii)
pdb|4DB9|F Chain F, Designed Armadillo Repeat Protein (Yiiim3aiii)
Length = 210
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 162 PQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVES 220
PQMV L NS D + + A+ L + S + + A+ +G +PALV+LLSSP E
Sbjct: 15 PQMVQQL-----NSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQ 69
Query: 221 VLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCL-QILAYGNQ 279
+L A+ L N+ AV AG L +V LL N + L L I + GN+
Sbjct: 70 ILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE 129
Query: 280 ESKLIILASQGPVELVRIMRSYDYEKL---LWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 336
+ + +I A P LV+++ S + + L LW S + S + K A+ EAG AL
Sbjct: 130 QIQAVIDAGALPA-LVQLLSSPNEQILQEALWALSN---IASGGNEQKQAVKEAGAEPAL 185
Query: 337 AMHLGHPSQRL 347
P++++
Sbjct: 186 EQLQSSPNEKI 196
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 534 PQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVES 592
PQMV L NS D + + A+ L + S + + A+ +G +PALV+LLSSP E
Sbjct: 15 PQMVQQL-----NSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQ 69
Query: 593 VLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCL-QILAYGNQ 651
+L A+ L N+ AV AG L +V LL N + L L I + GN+
Sbjct: 70 ILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE 129
Query: 652 ESKLIILASQGPVELVRIMRSYDYEKL---LWCTSRVLKVLSVCSSNKPAIVEAGGMQAL 708
+ + +I A P LV+++ S + + L LW S + S + K A+ EAG AL
Sbjct: 130 QIQAVIDAGALPA-LVQLLSSPNEQILQEALWALSN---IASGGNEQKQAVKEAGAEPAL 185
Query: 709 AMHLGHPSQRL 719
P++++
Sbjct: 186 EQLQSSPNEKI 196
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 101/196 (51%), Gaps = 6/196 (3%)
Query: 79 IPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVV 138
+P++++ LN DQ + A R + ++ N++ Q A + A+P L++LL+ ++ ++
Sbjct: 14 LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQ--AVIDAGALPALVQLLSSPNEQIL 71
Query: 139 SQAAMMVHQLSKKEASR-HAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQ 196
+A + ++ + A++++ + ALV +S+ N+ + + A+ L N+ S +
Sbjct: 72 QEALWALSNIASGGNEQIQAVIDAG-ALPALVQLLSSPNE-QILQEALWALSNIASGGNE 129
Query: 197 GLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLL 256
+ A+ +G +PALV+LLSSP E +L A+ L N+ K AV+ AG + L
Sbjct: 130 QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGAEPALEQLQ 189
Query: 257 GRNNVKFLAIVTDCLQ 272
N K + L+
Sbjct: 190 SSPNEKIQKEAQEALE 205
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 461 PTAVQRLTEPSQM-LKHAVVNLI------NYQDDADLATRAIPELIKLLNDEDQVVVSQA 513
P VQ+L P Q L+ A+ L N Q A + A+P L++LL+ ++ ++ +A
Sbjct: 15 PQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEA 74
Query: 514 AMMVHQLSKKEASR-HAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQGLL 571
+ ++ + A++++ + ALV +S+ N+ + + A+ L N+ S + +
Sbjct: 75 LWALSNIASGGNEQIQAVIDAG-ALPALVQLLSSPNE-QILQEALWALSNIASGGNEQIQ 132
Query: 572 AIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRN 631
A+ +G +PALV+LLSSP E +L A+ L N+ K AV+ AG + L
Sbjct: 133 AVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGAEPALEQLQSSP 192
Query: 632 NVKFLAIVTDCLQ 644
N K + L+
Sbjct: 193 NEKIQKEAQEALE 205
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 38/225 (16%)
Query: 13 NSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTLILQDD 71
NS D + + A+ L + S + + A+ +G +PALV+LLS S N ILQ+
Sbjct: 22 NSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLS-------SPNEQILQE- 73
Query: 72 ADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLN 131
A A+ + N++ Q A + A+P L++LL+ ++ A A+ + N
Sbjct: 74 ---ALWALSNIASGGNEQIQ--AVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN 128
Query: 132 DEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNL 191
++ Q V+ A+ ALV +S+ N+ + + A+ L N+
Sbjct: 129 EQIQAVIDAGAL----------------------PALVQLLSSPNE-QILQEALWALSNI 165
Query: 192 -SHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLH 235
S + A+ ++G PAL +L SSP E + A L + H
Sbjct: 166 ASGGNEQKQAVKEAGAEPALEQLQSSPNEKIQKEAQEALEKIQSH 210
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 461 PTAVQRLTEPS-QMLKHAVVNLINY------QDDADLATRAIPELIKLLNDEDQVVVSQA 513
P VQ L+ P+ Q+L+ A+ L N Q A + A+P L++LL+ ++ ++ +A
Sbjct: 57 PALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEA 116
Query: 514 AMMVHQLSKKEASR-HAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQGLL 571
+ ++ + A++++ + ALV +S+ N+ + + A+ L N+ S +
Sbjct: 117 LWALSNIASGGNEQIQAVIDAG-ALPALVQLLSSPNE-QILQEALWALSNIASGGNEQKQ 174
Query: 572 AIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLH 607
A+ ++G PAL +L SSP E + A L + H
Sbjct: 175 AVKEAGAEPALEQLQSSPNEKIQKEAQEALEKIQSH 210
>pdb|1DOW|B Chain B, Crystal Structure Of A Chimera Of Beta-Catenin And Alpha-
Catenin
Length = 32
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 28/31 (90%)
Query: 461 PTAVQRLTEPSQMLKHAVVNLINYQDDADLA 491
PT VQRL EPSQ LKHAVVNLINYQDDA+LA
Sbjct: 2 PTNVQRLAEPSQXLKHAVVNLINYQDDAELA 32
>pdb|3LTM|A Chain A, Structure Of A New Family Of Artificial Alpha Helicoidal
Repeat Proteins (Alpha-Rep) Based On Thermostable
Heat-Like Repeats
pdb|3LTM|B Chain B, Structure Of A New Family Of Artificial Alpha Helicoidal
Repeat Proteins (Alpha-Rep) Based On Thermostable
Heat-Like Repeats
Length = 211
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 77 RAIPELIKLLNDED----QDDADLA-----TRAIPELIKLLNDED---QDDADLA----- 119
RA+ LIK L DED + AD RA+ LIK L DED + A +A
Sbjct: 50 RAVEPLIKALKDEDAWVRRAAADALGQIGDERAVEPLIKALKDEDGWVRQSAAVALGQIG 109
Query: 120 -TRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEA 153
RA+ LIK L DED V AA + ++ + A
Sbjct: 110 DERAVEPLIKALKDEDWFVRIAAAFALGEIGDERA 144
Score = 38.5 bits (88), Expect = 0.020, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 68 LQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDED----QDDADLA---- 119
LQDD+ RA + + DE RA+ LIK L DED + AD
Sbjct: 28 LQDDSYYVRRAAAYALGKIGDE---------RAVEPLIKALKDEDAWVRRAAADALGQIG 78
Query: 120 -TRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEA 153
RA+ LIK L DED V AA+ + Q+ + A
Sbjct: 79 DERAVEPLIKALKDEDGWVRQSAAVALGQIGDERA 113
Score = 37.0 bits (84), Expect = 0.047, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 40/84 (47%), Gaps = 18/84 (21%)
Query: 77 RAIPELIKLLNDED---QDDADLA------TRAIPELIKLLNDED---QDDADLA----- 119
RA+ LIK L DED + A +A RA+ LIK L DED + A A
Sbjct: 81 RAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKALKDEDWFVRIAAAFALGEIG 140
Query: 120 -TRAIPELIKLLNDEDQVVVSQAA 142
RA+ LIK L DED V AA
Sbjct: 141 DERAVEPLIKALKDEDGWVRQSAA 164
>pdb|1XM9|A Chain A, Structure Of The Armadillo Repeat Domain Of Plakophilin 1
Length = 457
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%)
Query: 169 VHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITT 228
V +S+ ++ GA H +++ GGI LV LL SP ++V A
Sbjct: 8 VQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGA 67
Query: 229 LHNLLLHQEGSKMAVRLAGGLQKMVLLLGR 258
L NL+ +K+ R G+++ V LL R
Sbjct: 68 LRNLVFRSTTNKLETRRQNGIREAVSLLRR 97
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%)
Query: 541 VHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITT 600
V +S+ ++ GA H +++ GGI LV LL SP ++V A
Sbjct: 8 VQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGA 67
Query: 601 LHNLLLHQEGSKMAVRLAGGLQKMVLLLGR 630
L NL+ +K+ R G+++ V LL R
Sbjct: 68 LRNLVFRSTTNKLETRRQNGIREAVSLLRR 97
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%)
Query: 207 IPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAI 266
IP V+ LSS E + + E +K V GG+ K+V LL N
Sbjct: 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQA 63
Query: 267 VTDCLQILAYGNQESKLIILASQGPVELVRIMR 299
L+ L + + +KL G E V ++R
Sbjct: 64 AAGALRNLVFRSTTNKLETRRQNGIREAVSLLR 96
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%)
Query: 579 IPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAI 638
IP V+ LSS E + + E +K V GG+ K+V LL N
Sbjct: 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQA 63
Query: 639 VTDCLQILAYGNQESKLIILASQGPVELVRIMR 671
L+ L + + +KL G E V ++R
Sbjct: 64 AAGALRNLVFRSTTNKLETRRQNGIREAVSLLR 96
>pdb|3LTJ|A Chain A, Structure Of A New Family Of Artificial Alpha Helicoidal
Repeat Proteins (Alpha-Rep) Based On Thermostable
Heat-Like Repeats
Length = 201
Score = 38.9 bits (89), Expect = 0.014, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 77 RAIPELIKLLNDED----QDDADLA-----TRAIPELIKLLNDED---QDDADLA----- 119
RA+ LIK L DED + AD RA+ LIK L DED + A +A
Sbjct: 45 RAVEPLIKALKDEDAWVRRAAADALGQIGDERAVEPLIKALKDEDGWVRQSAAVALGQIG 104
Query: 120 -TRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEA 153
RA+ LIK L DED V AA + ++ + A
Sbjct: 105 DERAVEPLIKALKDEDWFVRIAAAFALGEIGDERA 139
Score = 37.7 bits (86), Expect = 0.028, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 68 LQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDED----QDDADLA---- 119
LQDD+ RA + + DE RA+ LIK L DED + AD
Sbjct: 23 LQDDSYYVRRAAAYALGKIGDE---------RAVEPLIKALKDEDAWVRRAAADALGQIG 73
Query: 120 -TRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEA 153
RA+ LIK L DED V AA+ + Q+ + A
Sbjct: 74 DERAVEPLIKALKDEDGWVRQSAAVALGQIGDERA 108
Score = 36.6 bits (83), Expect = 0.066, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 40/84 (47%), Gaps = 18/84 (21%)
Query: 77 RAIPELIKLLNDED---QDDADLA------TRAIPELIKLLNDED---QDDADLA----- 119
RA+ LIK L DED + A +A RA+ LIK L DED + A A
Sbjct: 76 RAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKALKDEDWFVRIAAAFALGEIG 135
Query: 120 -TRAIPELIKLLNDEDQVVVSQAA 142
RA+ LIK L DED V AA
Sbjct: 136 DERAVEPLIKALKDEDGWVRQSAA 159
>pdb|3L6X|A Chain A, Crystal Structure Of P120 Catenin In Complex With
E-Cadherin
pdb|3L6Y|A Chain A, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
pdb|3L6Y|C Chain C, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
pdb|3L6Y|E Chain E, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
Length = 584
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 123 IPELIKLLNDEDQVVVSQAAMMVHQL----SKKEASRHAIMNSPQMVAALVHAISNSNDL 178
+PE+I +L V S AA + L K + + P +V L H
Sbjct: 50 LPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKK----- 104
Query: 179 ETTKGAVGTLHNLSHHRQ--GLLAIFKSGGIPALVKLLSSPVESVLFYAIT-TLHNLLLH 235
E GA G L N+S R +AI G+PALV+LL + L IT TL NL H
Sbjct: 105 EVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSH 164
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 495 IPELIKLLNDEDQVVVSQAAMMVHQL----SKKEASRHAIMNSPQMVAALVHAISNSNDL 550
+PE+I +L V S AA + L K + + P +V L H
Sbjct: 50 LPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKK----- 104
Query: 551 ETTKGAVGTLHNLSHHRQ--GLLAIFKSGGIPALVKLLSSPVESVLFYAIT-TLHNLLLH 607
E GA G L N+S R +AI G+PALV+LL + L IT TL NL H
Sbjct: 105 EVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSH 164
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 22 GAVGTLHNLSHHRQ--GLLAIFKSGGIPALVKLLSK 55
GA G L N+S R +AI G+PALV+LL K
Sbjct: 109 GACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRK 144
>pdb|1P22|C Chain C, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex:
Destruction Motif Binding And Lysine Specificity On The
Scfbeta-Trcp1 Ubiquitin Ligase
Length = 26
Score = 34.7 bits (78), Expect = 0.30, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 796 SVNMWQQQNYLVDSGIHSGVNTNAP 820
+V+ WQQQ+YL D GIH G T AP
Sbjct: 3 AVSHWQQQSYL-DXGIHXGATTTAP 26
>pdb|2G57|A Chain A, Structure Of The Phosphorylation Motif Of The Oncogenic
Protein Beta-Catenin Recognized By A Selective
Monoclonal Antibody
Length = 28
Score = 34.7 bits (78), Expect = 0.30, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 796 SVNMWQQQNYLVDSGIHSGVNTNAP 820
+V+ WQQQ+YL D GIH G T AP
Sbjct: 4 AVSHWQQQSYL-DXGIHXGATTTAP 27
>pdb|3UKW|B Chain B, Mouse Importin Alpha: Bimax1 Peptide Complex
pdb|3UKX|B Chain B, Mouse Importin Alpha: Bimax2 Peptide Complex
pdb|3UKY|B Chain B, Mouse Importin Alpha: Yeast Cbp80 Cnls Complex
pdb|3UKZ|B Chain B, Mouse Importin Alpha: Mouse Cbp80 Cnls Complex
pdb|3UL0|B Chain B, Mouse Importin Alpha: Mouse Cbp80y8d Cnls Complex
pdb|3UL1|B Chain B, Mouse Importin Alpha: Nucleoplasmin Cnls Peptide Complex
Length = 510
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 129/311 (41%), Gaps = 26/311 (8%)
Query: 70 DDADLA-----------TRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADL 118
DD DLA ++ +++K +N + + AT+A KLL+ E Q D
Sbjct: 39 DDDDLAMADIGSNQGTVNWSVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDN 95
Query: 119 ATRA--IPELIKLLNDED-QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNS 175
RA IP+ + L D + ++A + ++ + + + + A + ++ S
Sbjct: 96 IIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA-S 154
Query: 176 NDLETTKGAVGTLHNLSHHRQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTL 229
++ AV L N++ + K G I L+ LL+ P S L TL
Sbjct: 155 PHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTL 214
Query: 230 HNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQ 289
NL ++ + + L +V LL N+ + LA + L G E ++ ++ +
Sbjct: 215 SNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKK 273
Query: 290 GPV-ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLV 348
G V +LV+++ + + + + +++ +++AG + L +P +
Sbjct: 274 GVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQ 333
Query: 349 QNCLWTLRNLS 359
+ WT+ N++
Sbjct: 334 KEATWTMSNIT 344
Score = 30.0 bits (66), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 573 IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGGLQKMVLL 627
+ K G I L+ LL+ P S L TL NL ++ + + L +V L
Sbjct: 181 VIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRL 240
Query: 628 LGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLLWCTSRVL 686
L N+ + LA + L G E ++ ++ +G V +LV+++ + + + +
Sbjct: 241 LHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVTPALRAIG 299
Query: 687 KVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 731
+++ +++AG + L +P + + WT+ N++
Sbjct: 300 NIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 344
>pdb|1EJL|I Chain I, Mouse Importin Alpha-Sv40 Large T Antigen Nls Peptide
Complex
pdb|1EJY|I Chain I, Mouse Importin Alpha-Nucleoplasmin Nls Peptide Complex
pdb|1IQ1|C Chain C, Crystal Structure Of The Importin-Alpha(44-54)-Importin-
Alpha(70-529) Complex
pdb|1PJM|B Chain B, Mouse Importin Alpha-Bipartite Nls From Human
Retinoblastoma Protein Complex
pdb|1PJN|B Chain B, Mouse Importin Alpha-Bipartite Nls N1n2 From Xenopus
Laevis Phosphoprotein Complex
pdb|3KND|A Chain A, Tpx2:importin-Alpha Complex
pdb|3Q5U|A Chain A, A Minimal Nls From Human Scramblase 4 Complexed With
Importin Alpha
Length = 460
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 124/292 (42%), Gaps = 15/292 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + + AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 8 SVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC 64
Query: 135 QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHH 194
+ ++A + ++ + + + + A + ++ S ++ AV L N++
Sbjct: 65 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGD 123
Query: 195 RQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGG 248
+ K G I L+ LL+ P S L TL NL ++ + +
Sbjct: 124 GSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQI 183
Query: 249 LQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLL 307
L +V LL N+ + LA + L G E ++ ++ +G V +LV+++ + + +
Sbjct: 184 LPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVT 242
Query: 308 WCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 243 PALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 294
Score = 29.6 bits (65), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 573 IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGGLQKMVLL 627
+ K G I L+ LL+ P S L TL NL ++ + + L +V L
Sbjct: 131 VIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRL 190
Query: 628 LGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLLWCTSRVL 686
L N+ + LA + L G E ++ ++ +G V +LV+++ + + + +
Sbjct: 191 LHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVTPALRAIG 249
Query: 687 KVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 731
+++ +++AG + L +P + + WT+ N++
Sbjct: 250 NIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 294
>pdb|4HTV|A Chain A, Mouse Importin Alpha: Bfdv Cap Nls Peptide Complex
Length = 509
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 129/311 (41%), Gaps = 26/311 (8%)
Query: 70 DDADLA-----------TRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADL 118
DD DLA ++ +++K +N + + AT+A KLL+ E Q D
Sbjct: 39 DDDDLAMADIGSNQGTVNWSVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDN 95
Query: 119 ATRA--IPELIKLLNDED-QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNS 175
RA IP+ + L D + ++A + ++ + + + + A + ++ S
Sbjct: 96 IIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA-S 154
Query: 176 NDLETTKGAVGTLHNLSHHRQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTL 229
++ AV L N++ + K G I L+ LL+ P S L TL
Sbjct: 155 PHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTL 214
Query: 230 HNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQ 289
NL ++ + + L +V LL N+ + LA + L G E ++ ++ +
Sbjct: 215 SNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKK 273
Query: 290 GPV-ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLV 348
G V +LV+++ + + + + +++ +++AG + L +P +
Sbjct: 274 GVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQ 333
Query: 349 QNCLWTLRNLS 359
+ WT+ N++
Sbjct: 334 KEATWTMSNIT 344
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 573 IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGGLQKMVLL 627
+ K G I L+ LL+ P S L TL NL ++ + + L +V L
Sbjct: 181 VIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRL 240
Query: 628 LGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLLWCTSRVL 686
L N+ + LA + L G E ++ ++ +G V +LV+++ + + + +
Sbjct: 241 LHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVTPALRAIG 299
Query: 687 KVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 731
+++ +++AG + L +P + + WT+ N++
Sbjct: 300 NIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 344
>pdb|1Q1S|C Chain C, Mouse Importin Alpha- Phosphorylated Sv40 Cn Peptide
Complex
pdb|1Q1T|C Chain C, Mouse Importin Alpha: Non-Phosphorylated Sv40 Cn Peptide
Complex
Length = 466
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 124/292 (42%), Gaps = 15/292 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + + AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 14 SVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC 70
Query: 135 QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHH 194
+ ++A + ++ + + + + A + ++ S ++ AV L N++
Sbjct: 71 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGD 129
Query: 195 RQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGG 248
+ K G I L+ LL+ P S L TL NL ++ + +
Sbjct: 130 GSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQI 189
Query: 249 LQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLL 307
L +V LL N+ + LA + L G E ++ ++ +G V +LV+++ + + +
Sbjct: 190 LPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVT 248
Query: 308 WCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 249 PALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 300
Score = 29.6 bits (65), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 573 IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGGLQKMVLL 627
+ K G I L+ LL+ P S L TL NL ++ + + L +V L
Sbjct: 137 VIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRL 196
Query: 628 LGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLLWCTSRVL 686
L N+ + LA + L G E ++ ++ +G V +LV+++ + + + +
Sbjct: 197 LHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVTPALRAIG 255
Query: 687 KVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 731
+++ +++AG + L +P + + WT+ N++
Sbjct: 256 NIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 300
>pdb|3VE6|A Chain A, Crystal Structure Analysis Of Venezuelan Equine
Encephalitis Virus Capsid Protein Nls And Importin Alpha
Length = 426
Score = 33.9 bits (76), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 123/293 (41%), Gaps = 17/293 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + + AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 7 SVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC 63
Query: 135 -QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSH 193
+ A + + S A+++ + A + ++ S ++ AV L N++
Sbjct: 64 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFI--SLLASPHAHISEQAVWALGNIAG 121
Query: 194 HRQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAG 247
+ K G I L+ LL+ P S L TL NL ++ + +
Sbjct: 122 DGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQ 181
Query: 248 GLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKL 306
L +V LL N+ + LA + L G E ++ ++ +G V +LV+++ + + +
Sbjct: 182 ILPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIV 240
Query: 307 LWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 241 TPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 293
>pdb|3L3Q|A Chain A, Mouse Importin Alpha-Peptm Nls Peptide Complex
Length = 427
Score = 33.9 bits (76), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 123/293 (41%), Gaps = 17/293 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + + AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 7 SVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC 63
Query: 135 -QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSH 193
+ A + + S A+++ + A + ++ S ++ AV L N++
Sbjct: 64 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFI--SLLASPHAHISEQAVWALGNIAG 121
Query: 194 HRQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAG 247
+ K G I L+ LL+ P S L TL NL ++ + +
Sbjct: 122 DGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQ 181
Query: 248 GLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKL 306
L +V LL N+ + LA + L G E ++ ++ +G V +LV+++ + + +
Sbjct: 182 ILPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIV 240
Query: 307 LWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 241 TPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 293
>pdb|2C1M|A Chain A, Nup50:importin-Alpha Complex
Length = 424
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 123/293 (41%), Gaps = 17/293 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + + AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 3 SVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC 59
Query: 135 -QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSH 193
+ A + + S A+++ + A + ++ S ++ AV L N++
Sbjct: 60 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFI--SLLASPHAHISEQAVWALGNIAG 117
Query: 194 HRQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAG 247
+ K G I L+ LL+ P S L TL NL ++ + +
Sbjct: 118 DGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQ 177
Query: 248 GLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKL 306
L +V LL N+ + LA + L G E ++ ++ +G V +LV+++ + + +
Sbjct: 178 ILPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIV 236
Query: 307 LWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 237 TPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 289
>pdb|3RZ9|A Chain A, Mouse Importin Alpha-Ku80 Nls Peptide Complex
pdb|3RZX|A Chain A, Mouse Importin Alpha-Ku70 Nls Peptide Complex
pdb|3OQS|A Chain A, Crystal Structure Of Importin-Alpha Bound To A Clic4 Nls
Peptide
pdb|3UVU|A Chain A, Structural Basis Of Nuclear Import Of Flap Endonuclease 1
(fen1)
Length = 510
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 124/292 (42%), Gaps = 15/292 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + + AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 58 SVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC 114
Query: 135 QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHH 194
+ ++A + ++ + + + + A + ++ S ++ AV L N++
Sbjct: 115 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGD 173
Query: 195 RQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGG 248
+ K G I L+ LL+ P S L TL NL ++ + +
Sbjct: 174 GSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQI 233
Query: 249 LQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLL 307
L +V LL N+ + LA + L G E ++ ++ +G V +LV+++ + + +
Sbjct: 234 LPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVT 292
Query: 308 WCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 293 PALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 344
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 573 IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGGLQKMVLL 627
+ K G I L+ LL+ P S L TL NL ++ + + L +V L
Sbjct: 181 VIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRL 240
Query: 628 LGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLLWCTSRVL 686
L N+ + LA + L G E ++ ++ +G V +LV+++ + + + +
Sbjct: 241 LHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVTPALRAIG 299
Query: 687 KVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 731
+++ +++AG + L +P + + WT+ N++
Sbjct: 300 NIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 344
>pdb|3BTR|C Chain C, Ar-Nls:importin-Alpha Complex
Length = 427
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 123/293 (41%), Gaps = 17/293 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + + AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 8 SVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC 64
Query: 135 -QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSH 193
+ A + + S A+++ + A + ++ S ++ AV L N++
Sbjct: 65 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFI--SLLASPHAHISEQAVWALGNIAG 122
Query: 194 HRQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAG 247
+ K G I L+ LL+ P S L TL NL ++ + +
Sbjct: 123 DGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQ 182
Query: 248 GLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKL 306
L +V LL N+ + LA + L G E ++ ++ +G V +LV+++ + + +
Sbjct: 183 ILPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIV 241
Query: 307 LWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 242 TPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 294
>pdb|1Y2A|C Chain C, Structure Of Mammalian Importin Bound To The Non-Classical
Plscr1-Nls
Length = 428
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 123/293 (41%), Gaps = 17/293 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + + AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 8 SVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC 64
Query: 135 -QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSH 193
+ A + + S A+++ + A + ++ S ++ AV L N++
Sbjct: 65 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFI--SLLASPHAHISEQAVWALGNIAG 122
Query: 194 HRQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAG 247
+ K G I L+ LL+ P S L TL NL ++ + +
Sbjct: 123 DGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQ 182
Query: 248 GLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKL 306
L +V LL N+ + LA + L G E ++ ++ +G V +LV+++ + + +
Sbjct: 183 ILPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIV 241
Query: 307 LWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 242 TPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 294
>pdb|4BA3|A Chain A, Mimp_alphadibb_a89nls
Length = 496
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 124/292 (42%), Gaps = 15/292 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + + AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 44 SVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC 100
Query: 135 QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHH 194
+ ++A + ++ + + + + A + ++ S ++ AV L N++
Sbjct: 101 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGD 159
Query: 195 RQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGG 248
+ K G I L+ LL+ P S L TL NL ++ + +
Sbjct: 160 GSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQI 219
Query: 249 LQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLL 307
L +V LL N+ + LA + L G E ++ ++ +G V +LV+++ + + +
Sbjct: 220 LPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVT 278
Query: 308 WCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 279 PALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 330
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 573 IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGGLQKMVLL 627
+ K G I L+ LL+ P S L TL NL ++ + + L +V L
Sbjct: 167 VIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRL 226
Query: 628 LGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLLWCTSRVL 686
L N+ + LA + L G E ++ ++ +G V +LV+++ + + + +
Sbjct: 227 LHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVTPALRAIG 285
Query: 687 KVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 731
+++ +++AG + L +P + + WT+ N++
Sbjct: 286 NIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 330
>pdb|2YNS|A Chain A, Rimp_alpha_b54nls
pdb|2YNS|B Chain B, Rimp_alpha_b54nls
pdb|4B8O|A Chain A, Rimp_alpha_sv40tagnls
pdb|4B8P|A Chain A, Rimp_alpha_a89nls
pdb|4B8P|B Chain B, Rimp_alpha_a89nls
Length = 490
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 98/254 (38%), Gaps = 31/254 (12%)
Query: 484 YQDDADLATRAIPELIKLLNDE-----DQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVA 538
Y DD +L A + KLL+ E ++V+ S Q +E + PQ+
Sbjct: 46 YSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTRE-------DFPQLQF 98
Query: 539 ALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAI 598
A++N A GT N + G +P VKLL S + V A+
Sbjct: 99 EAAWALTNI--------ASGTSENTK-------VVIDHGAVPIFVKLLGSSSDDVREQAV 143
Query: 599 TTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRN-NVKFLAIVTDCLQILAYGNQESKLII 657
L N+ + V G L ++ L + + L T L G +
Sbjct: 144 WALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQ 203
Query: 658 LASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNK-PAIVEAGGMQALAMHLGHPS 716
P L R++ S D E++L L LS +++K A++EAG L L HPS
Sbjct: 204 TRPALPA-LARLIHSND-EEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPS 261
Query: 717 QRLVQNCLWTLRNL 730
++ L T+ N+
Sbjct: 262 PSVLIPALRTVGNI 275
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 112/279 (40%), Gaps = 35/279 (12%)
Query: 87 NDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDE-----DQVVVSQA 141
+D+D+ AD+ + ++P +I + DD +L A + KLL+ E ++V+ S
Sbjct: 25 DDDDKAMADIGS-SLPAMIGGVY---SDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGV 80
Query: 142 AMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAI 201
Q +E + PQ+ A++N A GT N +
Sbjct: 81 VPRFVQFLTRE-------DFPQLQFEAAWALTNI--------ASGTSENTK-------VV 118
Query: 202 FKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRN-N 260
G +P VKLL S + V A+ L N+ + V G L ++ L +
Sbjct: 119 IDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTK 178
Query: 261 VKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVC 320
+ L T L G + P L R++ S D E++L L LS
Sbjct: 179 LSMLRNATWTLSNFCRGKPQPSFEQTRPALPA-LARLIHSND-EEVLTDACWALSYLSDG 236
Query: 321 SSNK-PAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNL 358
+++K A++EAG L L HPS ++ L T+ N+
Sbjct: 237 TNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNI 275
>pdb|3TPM|A Chain A, Crystal Structure Of Mal Rpel Domain In Complex With
Importin-Alpha
Length = 422
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 123/293 (41%), Gaps = 17/293 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + + AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 3 SVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC 59
Query: 135 -QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSH 193
+ A + + S A+++ + A + ++ S ++ AV L N++
Sbjct: 60 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFI--SLLASPHAHISEQAVWALGNIAG 117
Query: 194 HRQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAG 247
+ K G I L+ LL+ P S L TL NL ++ + +
Sbjct: 118 DGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQ 177
Query: 248 GLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKL 306
L +V LL N+ + LA + L G E ++ ++ +G V +LV+++ + + +
Sbjct: 178 ILPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIV 236
Query: 307 LWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 237 TPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 289
>pdb|2YNR|A Chain A, Mimp_alphadibb_b54nls
Length = 461
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 123/293 (41%), Gaps = 17/293 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + + AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 42 SVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC 98
Query: 135 -QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSH 193
+ A + + S A+++ + A + ++ S ++ AV L N++
Sbjct: 99 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFI--SLLASPHAHISEQAVWALGNIAG 156
Query: 194 HRQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAG 247
+ K G I L+ LL+ P S L TL NL ++ + +
Sbjct: 157 DGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQ 216
Query: 248 GLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKL 306
L +V LL N+ + LA + L G E ++ ++ +G V +LV+++ + + +
Sbjct: 217 ILPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIV 275
Query: 307 LWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 276 TPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 328
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 573 IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGGLQKMVLL 627
+ K G I L+ LL+ P S L TL NL ++ + + L +V L
Sbjct: 165 VIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRL 224
Query: 628 LGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLLWCTSRVL 686
L N+ + LA + L G E ++ ++ +G V +LV+++ + + + +
Sbjct: 225 LHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVTPALRAIG 283
Query: 687 KVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 731
+++ +++AG + L +P + + WT+ N++
Sbjct: 284 NIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 328
>pdb|1IAL|A Chain A, Importin Alpha, Mouse
Length = 453
Score = 33.5 bits (75), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 124/292 (42%), Gaps = 15/292 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + + AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 34 SVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC 90
Query: 135 QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHH 194
+ ++A + ++ + + + + A + ++ S ++ AV L N++
Sbjct: 91 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGD 149
Query: 195 RQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGG 248
+ K G I L+ LL+ P S L TL NL ++ + +
Sbjct: 150 GSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQI 209
Query: 249 LQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLL 307
L +V LL N+ + LA + L G E ++ ++ +G V +LV+++ + + +
Sbjct: 210 LPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVT 268
Query: 308 WCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 269 PALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 320
Score = 29.6 bits (65), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 573 IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGGLQKMVLL 627
+ K G I L+ LL+ P S L TL NL ++ + + L +V L
Sbjct: 157 VIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRL 216
Query: 628 LGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLLWCTSRVL 686
L N+ + LA + L G E ++ ++ +G V +LV+++ + + + +
Sbjct: 217 LHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVTPALRAIG 275
Query: 687 KVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 731
+++ +++AG + L +P + + WT+ N++
Sbjct: 276 NIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 320
>pdb|4B8J|A Chain A, Rimp_alpha1a
Length = 528
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 98/254 (38%), Gaps = 31/254 (12%)
Query: 484 YQDDADLATRAIPELIKLLNDE-----DQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVA 538
Y DD +L A + KLL+ E ++V+ S Q +E + PQ+
Sbjct: 84 YSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTRE-------DFPQLQF 136
Query: 539 ALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAI 598
A++N A GT N + G +P VKLL S + V A+
Sbjct: 137 EAAWALTNI--------ASGTSENTK-------VVIDHGAVPIFVKLLGSSSDDVREQAV 181
Query: 599 TTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRN-NVKFLAIVTDCLQILAYGNQESKLII 657
L N+ + V G L ++ L + + L T L G +
Sbjct: 182 WALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQ 241
Query: 658 LASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNK-PAIVEAGGMQALAMHLGHPS 716
P L R++ S D E++L L LS +++K A++EAG L L HPS
Sbjct: 242 TRPALPA-LARLIHSND-EEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPS 299
Query: 717 QRLVQNCLWTLRNL 730
++ L T+ N+
Sbjct: 300 PSVLIPALRTVGNI 313
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 97/252 (38%), Gaps = 31/252 (12%)
Query: 114 DDADLATRAIPELIKLLNDE-----DQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAAL 168
DD +L A + KLL+ E ++V+ S Q +E + PQ+
Sbjct: 86 DDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTRE-------DFPQLQFEA 138
Query: 169 VHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITT 228
A++N A GT N + G +P VKLL S + V A+
Sbjct: 139 AWALTNI--------ASGTSENTK-------VVIDHGAVPIFVKLLGSSSDDVREQAVWA 183
Query: 229 LHNLLLHQEGSKMAVRLAGGLQKMVLLLGRN-NVKFLAIVTDCLQILAYGNQESKLIILA 287
L N+ + V G L ++ L + + L T L G +
Sbjct: 184 LGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTR 243
Query: 288 SQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNK-PAIVEAGGMQALAMHLGHPSQR 346
P L R++ S D E++L L LS +++K A++EAG L L HPS
Sbjct: 244 PALPA-LARLIHSND-EEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPS 301
Query: 347 LVQNCLWTLRNL 358
++ L T+ N+
Sbjct: 302 VLIPALRTVGNI 313
>pdb|1BK5|A Chain A, Karyopherin Alpha From Saccharomyces Cerevisiae
pdb|1BK5|B Chain B, Karyopherin Alpha From Saccharomyces Cerevisiae
Length = 422
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 171
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 161 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 219
Query: 172 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 229
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 220 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 277
Query: 230 HNL 232
N+
Sbjct: 278 SNI 280
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 485 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 543
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 161 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 219
Query: 544 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 601
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 220 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 277
Query: 602 HNL 604
N+
Sbjct: 278 SNI 280
>pdb|1BK6|A Chain A, Karyopherin Alpha (Yeast) + Sv40 T Antigen Nls
pdb|1BK6|B Chain B, Karyopherin Alpha (Yeast) + Sv40 T Antigen Nls
Length = 422
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 171
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 161 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 219
Query: 172 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 229
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 220 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 277
Query: 230 HNL 232
N+
Sbjct: 278 SNI 280
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 485 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 543
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 161 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 219
Query: 544 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 601
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 220 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 277
Query: 602 HNL 604
N+
Sbjct: 278 SNI 280
>pdb|1EE5|A Chain A, Yeast Karyopherin (Importin) Alpha In A Complex With A
Nucleoplasmin Nls Peptide
Length = 424
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 171
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 163 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 221
Query: 172 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 229
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 222 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 279
Query: 230 HNL 232
N+
Sbjct: 280 SNI 282
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 485 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 543
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 163 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 221
Query: 544 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 601
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 222 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 279
Query: 602 HNL 604
N+
Sbjct: 280 SNI 282
>pdb|1EE4|A Chain A, Crystal Structure Of Yeast Karyopherin (Importin) Alpha In
A Complex With A C-Myc Nls Peptide
pdb|1EE4|B Chain B, Crystal Structure Of Yeast Karyopherin (Importin) Alpha In
A Complex With A C-Myc Nls Peptide
Length = 423
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 171
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 163 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 221
Query: 172 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 229
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 222 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 279
Query: 230 HNL 232
N+
Sbjct: 280 SNI 282
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 485 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 543
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 163 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 221
Query: 544 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 601
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 222 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 279
Query: 602 HNL 604
N+
Sbjct: 280 SNI 282
>pdb|3TPO|A Chain A, Crystal Structure Of D192aE396A MUTANT OF MOUSE IMPORTIN
ALPHA2
Length = 529
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 124/292 (42%), Gaps = 15/292 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + + AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 77 SVEDIVKGINSNNLESQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC 133
Query: 135 QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHH 194
+ ++A + ++ + + + + A + ++ S ++ AV L N++
Sbjct: 134 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGA 192
Query: 195 RQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGG 248
+ K G I L+ LL+ P S L TL NL ++ + +
Sbjct: 193 GSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQI 252
Query: 249 LQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLL 307
L +V LL N+ + LA + L G E ++ ++ +G V +LV+++ + + +
Sbjct: 253 LPTLVRLLHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVT 311
Query: 308 WCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 312 PALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 363
Score = 29.6 bits (65), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 573 IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGGLQKMVLL 627
+ K G I L+ LL+ P S L TL NL ++ + + L +V L
Sbjct: 200 VIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRL 259
Query: 628 LGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV-ELVRIMRSYDYEKLLWCTSRVL 686
L N+ + LA + L G E ++ ++ +G V +LV+++ + + + +
Sbjct: 260 LHHNDPEVLADSCWAISYLTDGPNE-RIEMVVKKGVVPQLVKLLGATELPIVTPALRAIG 318
Query: 687 KVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 731
+++ +++AG + L +P + + WT+ N++
Sbjct: 319 NIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 363
>pdb|1UN0|A Chain A, Crystal Structure Of Yeast Karyopherin (Importin) Alpha In
Complex With A Nup2p N-Terminal Fragment
pdb|1UN0|B Chain B, Crystal Structure Of Yeast Karyopherin (Importin) Alpha In
Complex With A Nup2p N-Terminal Fragment
Length = 443
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 171
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 162 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 220
Query: 172 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 229
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 221 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 278
Query: 230 HNL 232
N+
Sbjct: 279 SNI 281
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 485 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 543
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 162 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 220
Query: 544 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 601
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 221 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 278
Query: 602 HNL 604
N+
Sbjct: 279 SNI 281
>pdb|2C1T|A Chain A, Structure Of The Kap60p:nup2 Complex
pdb|2C1T|B Chain B, Structure Of The Kap60p:nup2 Complex
Length = 454
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 171
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 162 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 220
Query: 172 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 229
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 221 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 278
Query: 230 HNL 232
N+
Sbjct: 279 SNI 281
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 485 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 543
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 162 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 220
Query: 544 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 601
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 221 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 278
Query: 602 HNL 604
N+
Sbjct: 279 SNI 281
>pdb|3FEX|C Chain C, Crystal Structure Of The Cbc-Importin Alpha Complex.
pdb|3FEY|C Chain C, Crystal Structure Of The Cbc-Importin Alpha Complex
Length = 467
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 54/291 (18%), Positives = 122/291 (41%), Gaps = 13/291 (4%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELIKLLNDED- 134
++ +++K +N + ++ AT+A KLL+ E Q D RA IP+ + L D
Sbjct: 9 SVDDIVKGINSSNVENQLQATQAAR---KLLSREKQPPIDNIIRAGLIPKFVSFLGRTDC 65
Query: 135 QVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHH 194
+ ++A + ++ + + + + A + ++ S ++ AV L N++
Sbjct: 66 SPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGD 124
Query: 195 RQGLLA-IFKSGGIPALVKLLSSPVESVLFYAI-----TTLHNLLLHQEGSKMAVRLAGG 248
+ K G + L+ LL+ P S L TL NL ++ + +
Sbjct: 125 GSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQI 184
Query: 249 LQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLW 308
L +V LL ++ + LA + L G E +++ + +LV+++ + + +
Sbjct: 185 LPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTP 244
Query: 309 CTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS 359
+ +++ +++AG + L +P + + WT+ N++
Sbjct: 245 ALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIT 295
>pdb|1WA5|B Chain B, Crystal Structure Of The Exportin Cse1p Complexed With Its
Cargo (Kap60p) And Rangtp
Length = 530
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 171
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 249 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 307
Query: 172 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 229
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 308 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 365
Query: 230 HNL 232
N+
Sbjct: 366 SNI 368
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 485 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSK-KEASRHAIMNSPQMVAALVHA 543
Q D + ++A+P L KL+ D + A + LS + + A+++ ++ LV
Sbjct: 249 QPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RIPKRLVEL 307
Query: 544 ISNSNDLETTKG--AVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 601
+S+ + L T AVG + ++ + + +G +PAL LLSSP E++ A T+
Sbjct: 308 LSHESTLVQTPALRAVGNI--VTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 365
Query: 602 HNL 604
N+
Sbjct: 366 SNI 368
>pdb|1P4X|A Chain A, Crystal Structure Of Sars Protein From Staphylococcus
Aureus
Length = 250
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 44/89 (49%)
Query: 48 ALVKLLSKTLVTASSNNTLILQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKL 107
+ V+ ++T+ + N ++L+D + P+ ++ LN+ + + R+ + K+
Sbjct: 157 SFVEFTILAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKI 216
Query: 108 LNDEDQDDADLATRAIPELIKLLNDEDQV 136
L D D A + + ++ +LL D+D +
Sbjct: 217 LIHMDDAQQDHAEQLLAQVNQLLADKDHL 245
>pdb|1EI6|A Chain A, Crystal Structure Of Phosphonoacetate Hydrolase Complexed
With Phosphonoformate
pdb|1EI6|B Chain B, Crystal Structure Of Phosphonoacetate Hydrolase Complexed
With Phosphonoformate
pdb|1EI6|C Chain C, Crystal Structure Of Phosphonoacetate Hydrolase Complexed
With Phosphonoformate
pdb|1EI6|D Chain D, Crystal Structure Of Phosphonoacetate Hydrolase Complexed
With Phosphonoformate
Length = 406
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 219 ESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGN 278
E+ FYA+ + H++G+ +A+ G+ +GR N+ FL + D YG
Sbjct: 213 EANAFYAMMDSYFKRYHEQGAIVAITADHGMNAKTDAIGRPNILFLQDLLDA----QYGA 268
Query: 279 QESKLII 285
Q +++++
Sbjct: 269 QRTRVLL 275
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 591 ESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGN 650
E+ FYA+ + H++G+ +A+ G+ +GR N+ FL + D YG
Sbjct: 213 EANAFYAMMDSYFKRYHEQGAIVAITADHGMNAKTDAIGRPNILFLQDLLDA----QYGA 268
Query: 651 QESKLII 657
Q +++++
Sbjct: 269 QRTRVLL 275
>pdb|4AAY|A Chain A, Crystal Structure Of The Arsenite Oxidase Protein Complex
From Rhizobium Species Strain Nt-26
pdb|4AAY|C Chain C, Crystal Structure Of The Arsenite Oxidase Protein Complex
From Rhizobium Species Strain Nt-26
pdb|4AAY|E Chain E, Crystal Structure Of The Arsenite Oxidase Protein Complex
From Rhizobium Species Strain Nt-26
pdb|4AAY|G Chain G, Crystal Structure Of The Arsenite Oxidase Protein Complex
From Rhizobium Species Strain Nt-26
Length = 845
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 448 GIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQ 507
G + T F A+ T QRLT+P + ++ + ++ D DL R +++K ED
Sbjct: 105 GARMAETSFSEARNTQQQRLTDP-LVWRYGQMQPTSWDDALDLVARVTAKIVK-EKGEDA 162
Query: 508 VVVS 511
++VS
Sbjct: 163 LIVS 166
>pdb|4IL3|A Chain A, Crystal Structure Of S. Mikatae Ste24p
pdb|4IL3|B Chain B, Crystal Structure Of S. Mikatae Ste24p
Length = 461
Score = 29.6 bits (65), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 776 LVQTIVNAGDREEITEPADHSVNMWQQQNYLVDSGIHSGVNT 817
L T+VN+ +EIT H + W Q+N++V+ I S ++T
Sbjct: 278 LFDTLVNSNSTDEITAVLAHEIGHW-QKNHIVNMVIFSQLHT 318
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,808,047
Number of Sequences: 62578
Number of extensions: 911313
Number of successful extensions: 3070
Number of sequences better than 100.0: 71
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 2133
Number of HSP's gapped (non-prelim): 408
length of query: 986
length of database: 14,973,337
effective HSP length: 108
effective length of query: 878
effective length of database: 8,214,913
effective search space: 7212693614
effective search space used: 7212693614
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)