RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15604
(986 letters)
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 529
Score = 205 bits (522), Expect = 9e-58
Identities = 258/547 (47%), Positives = 311/547 (56%), Gaps = 38/547 (6%)
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V +
Sbjct: 9 QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTM 68
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNL
Sbjct: 69 QNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 128
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 292
LLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP
Sbjct: 129 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 188
Query: 293 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 352
LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PSQRLVQNCL
Sbjct: 189 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCL 248
Query: 353 WTLRNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCE-LAQDKEGAETIEAEG 400
WTLRNLSDA TK V LL ++ N+ AAG+L + + + G
Sbjct: 249 WTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVG 308
Query: 401 ATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQ 460
L + + +I + + + + L G+ +
Sbjct: 309 GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPS 368
Query: 461 PTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQL 520
+ + T L AIP L++LL Q + +
Sbjct: 369 HWPLIKATVGLIRNL----ALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTS------ 418
Query: 521 SKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIP 580
M + E +G G LH L+ + I IP
Sbjct: 419 ---------------MGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIP 463
Query: 581 ALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVT 640
V+LL SP+E++ A L L +E ++ G + LL N
Sbjct: 464 LFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEA-EGATAPLTELLHSRNEGVATYAA 522
Query: 641 DCLQILA 647
L ++
Sbjct: 523 AVLFRMS 529
Score = 204 bits (519), Expect = 2e-57
Identities = 270/531 (50%), Positives = 314/531 (59%), Gaps = 41/531 (7%)
Query: 477 AVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQM 536
AVVNLINYQDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQM
Sbjct: 1 AVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQM 60
Query: 537 VAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFY 596
V+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFY
Sbjct: 61 VSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFY 120
Query: 597 AITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLI 656
AITTLHNLLLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLI
Sbjct: 121 AITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLI 180
Query: 657 ILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPS 716
ILAS GP LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL PS
Sbjct: 181 ILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPS 240
Query: 717 QRLVQNCLWTLRNLSDAGTKVDGLESLLQSLVQLLASQDINVITCAAGVTVCQVGGVEAL 776
QRLVQNCLWTLRNLSDA TK +G+E LL +LVQLL S DINV+TCAAG+
Sbjct: 241 QRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKN 300
Query: 777 VQTIVNAGDREEITEPADHSVNMWQQQNYLVDSGIHSGVNTNAPSLTG------------ 824
+ G E + + + + + H +
Sbjct: 301 KMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVV 360
Query: 825 ----KEEDMDGDQLMFEMDQGFGQGFTQDQVTVCQVGGVEALVQTIVNAGD--------- 871
+ + + G + LVQ +V A
Sbjct: 361 VKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMG 420
Query: 872 -----------REEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPPSRWP 920
EEI E AL L + +R I V LL P
Sbjct: 421 GTQQQFVEGVRMEEIVEGCTGALHILAR----DVHNRIVIRGLNTIPLFVQLLYSPIE-N 475
Query: 921 LVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLF 971
+ + G++ LA + + GA L LL+ + LF
Sbjct: 476 IQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLF 526
Score = 89.6 bits (220), Expect = 5e-19
Identities = 94/545 (17%), Positives = 192/545 (35%), Gaps = 34/545 (6%)
Query: 231 NLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQG 290
NL+ +Q+ +++A R + ++ LL + + + L+ I+ + Q
Sbjct: 4 NLINYQDDAELATR---AIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQM 60
Query: 291 PVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQN 350
+VR M++ + + CT+ L LS AI ++GG+ AL LG P ++
Sbjct: 61 VSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFY 120
Query: 351 CLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTDLLH 410
+ TL NL + +Q++ A L + A L
Sbjct: 121 AITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLI 180
Query: 411 SRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEP 470
G + + + + K+ ++ ++ + + Q +
Sbjct: 181 ILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPS 240
Query: 471 SQMLKHAVVNLIN----YQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEAS 526
+++++ + L N + + L +D+ VV A ++ + +
Sbjct: 241 QRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKN 300
Query: 527 RHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLS----HHRQGLLAIFKSGGIPAL 582
+ + + A + + + + T+ A+ L +L+ A+ G+P +
Sbjct: 301 KMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVV 360
Query: 583 VKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDC 642
VKLL P L A L L + +R G + ++V LL R +
Sbjct: 361 VKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAH---------- 410
Query: 643 LQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEA 702
Q + Q VE VR+ E+++ + L +L+ N+ I
Sbjct: 411 -----QDTQRRTSMGGTQQQFVEGVRM------EEIVEGCTGALHILARDVHNRIVIRGL 459
Query: 703 GGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDGLESL--LQSLVQLLASQDINVIT 760
+ L P + + + L L+ + +E+ L +LL S++ V T
Sbjct: 460 NTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVAT 519
Query: 761 CAAGV 765
AA V
Sbjct: 520 YAAAV 524
Score = 79.6 bits (194), Expect = 7e-16
Identities = 98/429 (22%), Positives = 170/429 (39%), Gaps = 25/429 (5%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTLVTAS 61
+MV+A+V + N+ND+ET + GTLHNLSHHR+GLLAIFKSGGIPALVK+L + +
Sbjct: 59 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVL 118
Query: 62 SNNTLILQD---------DADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDED 112
L + A + +++ LLN + + T + L +++
Sbjct: 119 FYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAY--GNQE 176
Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
LA+ L+ ++ + V ++ +S + + AL +
Sbjct: 177 SKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHL 236
Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
++ + + + TL NLS G + LV+LL S +V+ A L NL
Sbjct: 237 TDPSQ-RLVQNCLWTLRNLSDAATK--QEGMEGLLGTLVQLLGSDDINVVTCAAGILSNL 293
Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFL-----AIVTDCLQILAYGNQESKLIILA 287
+ +KM V GG++ +V + R + L + ++ +
Sbjct: 294 TCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRL 353
Query: 288 SQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRL 347
G +V+++ + L+ T +++ L++C +N + E G + L L Q
Sbjct: 354 HYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 413
Query: 348 VQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTD 407
+ +E I G L LA+D I
Sbjct: 414 QRRTSMGGTQQQFVEGV------RMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQ 467
Query: 408 LLHSRNEGV 416
LL+S E +
Sbjct: 468 LLYSPIENI 476
Score = 69.9 bits (169), Expect = 7e-13
Identities = 95/539 (17%), Positives = 178/539 (33%), Gaps = 49/539 (9%)
Query: 4 VAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGG-IPALVKLLSKTL-VTAS 61
+ L + N D A +H LS AI +S + A+V+ + T V +
Sbjct: 19 IPELTKLL-NDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETA 77
Query: 62 SNNTLILQDDAD--------LATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQ 113
L + + + IP L+K+L A + LL+ E
Sbjct: 78 RCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTL--HNLLLHQEGA 135
Query: 114 DDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAIS 173
A + +++ LLN + ++ + L+ I+ + ALV+ +
Sbjct: 136 KMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMR 195
Query: 174 NSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLL 233
+ L LS AI ++GG+ AL L+ P + ++ + TL NL
Sbjct: 196 TYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLS 255
Query: 234 LHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVE 293
+ + G L +V LLG +++ + L L N ++K+++ G
Sbjct: 256 DAATKQEG---MEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEA 312
Query: 294 LVRIM-----RSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLV 348
LVR + R E + + + A+ G+ + L PS +
Sbjct: 313 LVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPL 372
Query: 349 QNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTDL 408
L N ++ A L +L +
Sbjct: 373 IKATVGLIRN-----LALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFV 427
Query: 409 LHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLT 468
R E EI+ + + + +R + P VQ L
Sbjct: 428 EGVRME--EIVEGCTGALHILARDVHNRIVIR-----GLN----------TIPLFVQLLY 470
Query: 469 EPSQMLKHAVV----NLINYQDDADL--ATRAIPELIKLLNDEDQVVVSQAAMMVHQLS 521
P + ++ L ++ A+ A A L +LL+ ++ V + AA ++ ++S
Sbjct: 471 SPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS 529
Score = 39.5 bits (90), Expect = 0.002
Identities = 16/117 (13%), Positives = 37/117 (31%), Gaps = 5/117 (4%)
Query: 857 GGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPP 916
+ L + + + + + A + L+ + +R + IV +
Sbjct: 17 RAIPELTKLL--NDEDQVVVNKAAVMVHQLSK---KEASRHAIMRSPQMVSAIVRTMQNT 71
Query: 917 SRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFFR 973
+ + G + NL+ + + + G I LV +L + T L
Sbjct: 72 NDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 128
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 457
Score = 109 bits (271), Expect = 1e-25
Identities = 69/440 (15%), Positives = 130/440 (29%), Gaps = 33/440 (7%)
Query: 207 IPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAI 266
IP V+ LSS E + + E +K V GG+ K+V LL N
Sbjct: 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQA 63
Query: 267 VTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPA 326
L+ L + + +KL G E V ++R ++ + +L LS K
Sbjct: 64 AAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEE 123
Query: 327 IVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCEL 386
++ + LA + P R + D + A G L L
Sbjct: 124 LIA-DALPVLADRVIIPFSGWCDGNSNMSREVVD------------PEVFFNATGCLRNL 170
Query: 387 AQDKEGAETIEAEGATAP-LTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETL 445
+ G +T+ L + + + V + +R P
Sbjct: 171 SSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRY 230
Query: 446 EEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATR-----AIPELIK 500
+ + T M + L + + + AI +
Sbjct: 231 RQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLN 290
Query: 501 LLNDEDQVVV------SQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTK 554
L+ + + + + I + + + + + N + +
Sbjct: 291 LMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNS-DVVR 349
Query: 555 GAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSS------PVESVLFYAITTLHNLLLHQ 608
L N+S H + + P + +LL+S E +L A T+ NL+ Q
Sbjct: 350 SGASLLSNMSRHPLLHRVM-GNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQ 408
Query: 609 EGSKMAVRLAGGLQKMVLLL 628
+ L ++ L
Sbjct: 409 PQLAKQYFSSSMLNNIINLC 428
Score = 99.5 bits (246), Expect = 2e-22
Identities = 81/468 (17%), Positives = 150/468 (32%), Gaps = 40/468 (8%)
Query: 162 PQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGL-LAIFKSGGIPALVKLLSSPVES 220
P+ V L +S D + + + + +++ GGI LV LL SP ++
Sbjct: 5 PKAVQYL-----SSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQN 59
Query: 221 VLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQE 280
V A L NL+ +K+ R G+++ V LL R + L E
Sbjct: 60 VQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 119
Query: 281 SK--------------LIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPA 326
K +II S + R ++ + + L+ LS + +
Sbjct: 120 LKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQT 179
Query: 327 IVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCEL 386
+ G+ M + ++ N + +L N + +L
Sbjct: 180 MRNYSGLIDSLMAYVQNCVAASRCDDKSVENC------MCVLHNLSYRLDAEVPTRYRQL 233
Query: 387 AQDKEGAETIEAEGATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLE 446
+ A T ++ N + + K H + L
Sbjct: 234 EYNARNAYTEKSS-TGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAI--RTYLN 290
Query: 447 EGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDED 506
+ A A+Q LT ++ + LI ++ +P++ +LL +
Sbjct: 291 LMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEK------GLPQIARLLQSGN 344
Query: 507 QVVVSQAAMMVHQLSKKEASRHAIMNS--PQMVAALVHAISN-SNDLETTKGAVGTLHNL 563
VV A ++ +S+ + N P++ L N SN + A T+ NL
Sbjct: 345 SDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNL 404
Query: 564 S-HHRQGLLAIFKSGGIPALVKLL-SSPVESVLFYAITTLHNLLLHQE 609
Q F S + ++ L SS A L ++ +E
Sbjct: 405 MASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 452
Score = 91.4 bits (225), Expect = 7e-20
Identities = 59/395 (14%), Positives = 116/395 (29%), Gaps = 10/395 (2%)
Query: 579 IPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAI 638
IP V+ LSS E + + E +K V GG+ K+V LL N
Sbjct: 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQA 63
Query: 639 VTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPA 698
L+ L + + +KL G E V ++R ++ + +L LS K
Sbjct: 64 AAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEE 123
Query: 699 IVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDGLESLLQSLVQLLASQDINV 758
++ + LA + P R + D + L Q +
Sbjct: 124 LIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRN 182
Query: 759 ITCAAGVTVCQVGG---VEALVQTIVNAGDREEITEPADHSVNMWQQQNYLVDSGIHSGV 815
+ + V V + + L + ++
Sbjct: 183 YSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYT 242
Query: 816 NTNAPSLTGKEEDMDGDQLMFEMDQGFGQGFTQDQVTVCQVGGVEALVQTIVNAGDREEI 875
++ + D + + + + + + + + ++
Sbjct: 243 EKSSTGCFSNKSDKMMNNNY-DCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK-SKKDAT 300
Query: 876 TEPAVCALRHLTSRHVE--SEMAQNAVRLNYGIQTIVNLLNPPSRWPLVKAVIGLIRNLA 933
E AL++LT+ S M+Q G+ I LL +V++ L+ N++
Sbjct: 301 LEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMS 359
Query: 934 LCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRT 968
H + + LL +T
Sbjct: 360 RHPLLHRVMGN-QVFPEVTRLLTSHTGNTSNSEDI 393
Score = 76.8 bits (187), Expect = 3e-15
Identities = 64/450 (14%), Positives = 131/450 (29%), Gaps = 54/450 (12%)
Query: 534 PQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGL-LAIFKSGGIPALVKLLSSPVES 592
P+ V L +S D + + + + +++ GGI LV LL SP ++
Sbjct: 5 PKAVQYL-----SSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQN 59
Query: 593 VLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQE 652
V A L NL+ +K+ R G+++ V LL R + L E
Sbjct: 60 VQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 119
Query: 653 SK--------------LIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPA 698
K +II S + R ++ + + L+ LS + +
Sbjct: 120 LKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQT 179
Query: 699 IVEAGGMQALAMHLGHPS-------QRLVQNCLWTLRNLSDAGTKVDGLESLLQSLVQLL 751
+ G+ M + V+NC+ L NLS
Sbjct: 180 MRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARN 239
Query: 752 ASQDINVITCAAGVTVCQVGGVEALVQTIVNAGDREEITEPADHSVNMWQQQNYLVDSGI 811
A + + C + ++N + E + +
Sbjct: 240 AYTEKSSTGCFSN-----------KSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTY 288
Query: 812 HSGVNTNAPSLTGKEEDMDGDQLMFEMDQGFGQGFTQDQVTVCQVGGVEALVQTIVNAGD 871
+ + + T + L Q+ + G+ + + + +
Sbjct: 289 LNLMGKSKKDATLEACAGALQNLTASKGL---MSSGMSQLIGLKEKGLPQIARLLQS--G 343
Query: 872 REEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPPSRWP-----LVKAVI 926
++ L +++ + V N + LL + ++ +
Sbjct: 344 NSDVVRSGASLLSNMSRHP-----LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSAC 398
Query: 927 GLIRNLALCQANHA-PLREYGAIHLLVILL 955
+RNL Q A ++ ++ L
Sbjct: 399 YTVRNLMASQPQLAKQYFSSSMLNNIINLC 428
Score = 73.7 bits (179), Expect = 3e-14
Identities = 58/498 (11%), Positives = 138/498 (27%), Gaps = 57/498 (11%)
Query: 79 IPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVV 138
IP+ ++ L+ +D+ + I DE I +L+ LL +Q V
Sbjct: 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCF--QDESAKQQVYQLGGICKLVDLLRSPNQNVQ 61
Query: 139 SQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGL 198
AA + L + + + V + + + E K G L NLS +
Sbjct: 62 QAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELK 121
Query: 199 LAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGR 258
+ +++ + +
Sbjct: 122 EELIADALPVLADRVIIPFSGWCDGNSNMSREV--------------------------- 154
Query: 259 NNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLS 318
+ + T CL+ L+ + + + S L+ +++ + ++
Sbjct: 155 VDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDD--KSVENCM 212
Query: 319 VCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRV 378
N ++A + + N+ + +
Sbjct: 213 CVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSS------------TGCFSNKSDKMMNN 260
Query: 379 AA-GLLCELAQDKEGAETIEAEGATAPLTDLLH-SRNEGVEILIQGVHKIFKIHKINIHR 436
L E + +G+ + A +L+ S+ + G + K +
Sbjct: 261 NYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSS 320
Query: 437 GCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIP 496
G E+G+ + + V+ + + + + P
Sbjct: 321 GMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS------RHPLLHRVMGNQVFP 374
Query: 497 ELIKLLNDEDQV------VVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDL 550
E+ +LL ++S A V L + S M+ +++ +S
Sbjct: 375 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASP 434
Query: 551 ETTKGAVGTLHNLSHHRQ 568
+ + A L ++ ++
Sbjct: 435 KAAEAARLLLSDMWSSKE 452
Score = 57.9 bits (138), Expect = 3e-09
Identities = 64/443 (14%), Positives = 128/443 (28%), Gaps = 64/443 (14%)
Query: 13 NSNDLETTKGAVGTLHNLSHHRQGL-LAIFKSGGIPALVKLLSKTLVTASSNNTLILQDD 71
+S D + + + + +++ GGI LV LL +
Sbjct: 12 SSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS--------------PN 57
Query: 72 ADLATRAIPELIKL-LNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLL 130
++ A L L I E + LL + + +
Sbjct: 58 QNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 117
Query: 131 NDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHN 190
++ + +++ A ++ S NS D E A G L N
Sbjct: 118 DELKEELIADALPVLADRVIIPFSGWCDGNSNMS--------REVVDPEVFFNATGCLRN 169
Query: 191 LSHHRQGL-LAIFKSGGIPALVKLLSSPVESV------LFYAITTLHNLLLHQEGSKMA- 242
LS G SG I +L+ + + V + + + LHNL +
Sbjct: 170 LSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTR 229
Query: 243 -------VRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELV 295
R A + + K + DC N + + S +
Sbjct: 230 YRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYL 289
Query: 296 RIMRSYDYEKLLWCTSRVLKVLSVCSS------NKPAIVEAGGMQALAMHLGHPSQRLVQ 349
+M + L + L+ L+ ++ ++ G+ +A L + +V+
Sbjct: 290 NLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVR 349
Query: 350 NCLWTLRNLSDAGTKVSLLFNEI------------------ENIQRVAAGLLCELA-QDK 390
+ L N+S ++ N++ E+I A + L
Sbjct: 350 SGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP 409
Query: 391 EGAETIEAEGATAPLTDLLHSRN 413
+ A+ + + +L S
Sbjct: 410 QLAKQYFSSSMLNNIINLCRSSA 432
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId:
10090]}
Length = 434
Score = 76.8 bits (187), Expect = 3e-15
Identities = 63/454 (13%), Positives = 132/454 (29%), Gaps = 47/454 (10%)
Query: 204 SGGIPALVKLLSSPVESVLFYAITTLHNLL-LHQEGSKMAVRLAGGLQKMVLLLGRNNVK 262
+ + +VK ++S A LL ++ + AG + K V LG+ +
Sbjct: 12 NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCS 71
Query: 263 FLAI-VTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCS 321
+ L +A G E ++ + ++ S + + S
Sbjct: 72 PIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGS 131
Query: 322 SNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAG 381
+ + +++ G + L L P + R
Sbjct: 132 AFRDLVIKHGAIDPLLALLAVPDLSTLACGYL-----------------------RNLTW 168
Query: 382 LLCELAQDKEG-AETIEAEGATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLM 440
L L ++K E L LLH + V +
Sbjct: 169 TLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVK 228
Query: 441 FPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIK 500
Q + P+ +V + Q + A+
Sbjct: 229 K---------GVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPS 279
Query: 501 LLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTL 560
LL + + +A + ++ + + + +V LV + + D +T K A +
Sbjct: 280 LLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVG-VLSKADFKTQKEAAWAI 338
Query: 561 HNLSHHR--QGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLL------HQEGSK 612
N + + ++ + G I L+ LLS+ ++ + + N+ E
Sbjct: 339 TNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLS 398
Query: 613 MAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQIL 646
+ + GGL K+ L N + L ++
Sbjct: 399 IMIEECGGLDKIEALQRHENES---VYKASLNLI 429
Score = 76.4 bits (186), Expect = 5e-15
Identities = 63/385 (16%), Positives = 144/385 (37%), Gaps = 28/385 (7%)
Query: 70 DDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRA--IPELI 127
+ ++ +++K +N + + AT+A KLL+ E Q D RA IP+ +
Sbjct: 6 SNQGTVNWSVEDIVKGINSNNLESQLQATQA---ARKLLSREKQPPIDNIIRAGLIPKFV 62
Query: 128 KLLNDEDQV-VVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVG 186
L D + ++A + ++ + + + + A + +++ + + +
Sbjct: 63 SFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWA 122
Query: 187 TLHNLSHHRQGLLAIFKSGGIPALVKLL-----SSPVESVLFYAITTLHNLLLHQEGSKM 241
+ + K G I L+ LL S+ L TL NL ++ +
Sbjct: 123 LGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPP 182
Query: 242 AVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSY 301
+ L +V LL N+ + LA + L G E +++ +LV+++ +
Sbjct: 183 LDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGAT 242
Query: 302 DYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDA 361
+ + + +++ +++AG + L +P + + WT+ N++
Sbjct: 243 ELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAG 302
Query: 362 GTK--------------VSLLFNEIENIQRVAAGLLCELAQ--DKEGAETIEAEGATAPL 405
V +L Q+ AA + E + G PL
Sbjct: 303 RQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPL 362
Query: 406 TDLLHSRNEGV-EILIQGVHKIFKI 429
+LL +++ + ++++ + IF+
Sbjct: 363 MNLLSAKDTKIIQVILDAISNIFQA 387
Score = 67.5 bits (163), Expect = 3e-12
Identities = 45/249 (18%), Positives = 89/249 (35%), Gaps = 9/249 (3%)
Query: 486 DDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEAS--RHAIMNSPQMVAALVHA 543
+ ++ +++K +N + QA +L +E I+ + ++ V
Sbjct: 6 SNQGTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRA-GLIPKFVSF 64
Query: 544 ISNSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLH 602
+ ++ + L N+ S + A+ G IPA + LL+SP + A+ L
Sbjct: 65 LGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALG 124
Query: 603 NLLLHQEGSKMAVRLAGGLQKMVLLLGRNN-----VKFLAIVTDCLQILAYGNQESKLII 657
N+ + V G + ++ LL + +L +T L L + +
Sbjct: 125 NIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLD 184
Query: 658 LASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQ 717
Q LVR++ D E L + + + +V+ G + L LG
Sbjct: 185 AVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATEL 244
Query: 718 RLVQNCLWT 726
+V L
Sbjct: 245 PIVTPALRA 253
Score = 66.4 bits (160), Expect = 7e-12
Identities = 73/460 (15%), Positives = 150/460 (32%), Gaps = 47/460 (10%)
Query: 285 ILASQGPV-----ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKP--AIVEAGGMQALA 337
I ++QG V ++V+ + S + E L T K+LS P I+ AG +
Sbjct: 4 IGSNQGTVNWSVEDIVKGINSNNLESQLQATQAARKLLSR-EKQPPIDNIIRAGLIPKFV 62
Query: 338 MHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELA-QDKEGAETI 396
LG + IQ +A L +A E + +
Sbjct: 63 SFLGK---------------------------TDCSPIQFESAWALTNIASGTSEQTKAV 95
Query: 397 EAEGATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQF 456
GA LL S + + + +
Sbjct: 96 VDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDL 155
Query: 457 DTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMM 516
T ++ LT L N D + +P L++LL+ D V++ +
Sbjct: 156 STLACGYLRNLTWTLSNLCRNK----NPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWA 211
Query: 517 VHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKS 576
+ L+ R ++ +V LV + + T + ++ + + +
Sbjct: 212 ISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDA 271
Query: 577 GGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFL 636
G + LL++P ++ A T+ N+ ++ V G + +V +L + + K
Sbjct: 272 GALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQ 331
Query: 637 AIVTDCLQILAYGNQESKLIILASQGPVE-LVRIMRSYDYE---KLLWCTSRVLKVLSVC 692
+ G +++ L G +E L+ ++ + D + +L S + +
Sbjct: 332 KEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKL 391
Query: 693 SSNKPA---IVEAGGMQALAMHLGHPSQRLVQNCLWTLRN 729
+ I E GG+ + H ++ + + L +
Sbjct: 392 GETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIEK 431
Score = 65.2 bits (157), Expect = 2e-11
Identities = 82/436 (18%), Positives = 147/436 (33%), Gaps = 52/436 (11%)
Query: 4 VAALVHAISNSNDLETTKGAVGTLHN-LSHHRQGLL-AIFKSGGIPALVKLLSKT----- 56
V +V I NSN+LE+ A LS +Q + I ++G IP V L KT
Sbjct: 15 VEDIVKGI-NSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPI 73
Query: 57 ----------LVTASSNNTLILQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIK 106
+ + +S T + D AIP I LL ++ A A+
Sbjct: 74 QFESAWALTNIASGTSEQTKAVVDGG-----AIPAFISLLASPHAHISEQAVWAL--GNI 126
Query: 107 LLNDEDQDDADLATRAIPELIKLLNDEDQ-----VVVSQAAMMVHQLSKKEASRHAIMNS 161
+ D + AI L+ LL D + + L + + +
Sbjct: 127 AGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAV 186
Query: 162 PQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESV 221
Q++ LV + +++ + + + + K G +P LVKLL + +
Sbjct: 187 EQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPI 246
Query: 222 LFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQES 281
+ A+ + N++ + V AG L LL T + + G Q+
Sbjct: 247 VTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQ 306
Query: 282 KLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSS-NKPAIVEAGGMQALAMHL 340
++ LV ++ D++ + S + +V G ++ L L
Sbjct: 307 IQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLL 366
Query: 341 GHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEG 400
+++Q L + N+ A K L + ++ + IE G
Sbjct: 367 SAKDTKIIQVILDAISNIFQAAEK---------------------LGETEKLSIMIEECG 405
Query: 401 ATAPLTDLLHSRNEGV 416
+ L NE V
Sbjct: 406 GLDKIEALQRHENESV 421
Score = 59.0 bits (141), Expect = 1e-09
Identities = 57/375 (15%), Positives = 128/375 (34%), Gaps = 20/375 (5%)
Query: 3 MVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLS----KTL 57
++ V + ++ + L N+ S + A+ G IPA + LL+
Sbjct: 57 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHIS 116
Query: 58 VTASSNNTLILQDDADLATRAIP--------ELIKLLNDEDQDDADLATRAIPELIKLLN 109
A I D + I L+ + + L N
Sbjct: 117 EQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRN 176
Query: 110 DEDQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALV 169
D + +P L++LL+ D V++ + + L+ R ++ +V LV
Sbjct: 177 KNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLV 236
Query: 170 HAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 229
+ + T + ++ + + +G + LL++P ++ A T+
Sbjct: 237 KLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTM 296
Query: 230 HNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQ 289
N+ ++ V G + +V +L + + K + G +++ L
Sbjct: 297 SNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC 356
Query: 290 GPVE-LVRIMRSYDYE---KLLWCTSRVLKVLSVCSSNKPA---IVEAGGMQALAMHLGH 342
G +E L+ ++ + D + +L S + + + I E GG+ + H
Sbjct: 357 GIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRH 416
Query: 343 PSQRLVQNCLWTLRN 357
++ + + L +
Sbjct: 417 ENESVYKASLNLIEK 431
Score = 52.5 bits (124), Expect = 2e-07
Identities = 61/405 (15%), Positives = 128/405 (31%), Gaps = 45/405 (11%)
Query: 576 SGGIPALVKLLSSPVESVLFYAITTLHNLL-LHQEGSKMAVRLAGGLQKMVLLLGRNNVK 634
+ + +VK ++S A LL ++ + AG + K V LG+ +
Sbjct: 12 NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCS 71
Query: 635 FLAI-VTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCS 693
+ L +A G E ++ + ++ S + + S
Sbjct: 72 PIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGS 131
Query: 694 SNKPAIVEAGGMQALAMHLGHP-----SQRLVQNCLWTLRNL---SDAGTKVDGLESLLQ 745
+ + +++ G + L L P + ++N WTL NL + +D +E +L
Sbjct: 132 AFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILP 191
Query: 746 SLVQLLASQDINVITCAAGVTVCQVGGVEALVQTIVNAGDREEITEPADHSVNMWQQQNY 805
+LV+LL D V+ + G ++ +V G ++ + +
Sbjct: 192 TLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIV---- 247
Query: 806 LVDSGIHSGVNTNAPSLTGKEEDMDGDQLMFEMDQGFGQGFTQDQVTVCQVGGVEALVQT 865
T A G +Q +D G F
Sbjct: 248 -----------TPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTN------------- 283
Query: 866 IVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPPSRWPLVKAV 925
+ I + A + ++T+ + L + +++ + ++ A+
Sbjct: 284 -----PKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAI 338
Query: 926 IGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGL 970
+ Q + L G I L+ LL+ T +V +
Sbjct: 339 TNYTSGGTVEQIVY--LVHCGIIEPLMNLLSAKDTKIIQVILDAI 381
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 503
Score = 76.3 bits (186), Expect = 7e-15
Identities = 65/430 (15%), Positives = 137/430 (31%), Gaps = 45/430 (10%)
Query: 249 LQKMVLLLGRNNVKF-LAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLL 307
L +M L ++++ L+ QIL+ ++ +++ + LV MR E L
Sbjct: 78 LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQ 137
Query: 308 WCTSRVLKVLSVCSSNKP-AIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAG---- 362
+ L ++ +S + +V+A + L S + + +W L N++
Sbjct: 138 LEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYR 197
Query: 363 ----------TKVSLLFNEIENIQRVAAGLLCELAQDKE-GAETIEAEGATAPLTDLLHS 411
+ L + ++ R A L L + K+ + A L L++S
Sbjct: 198 DYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYS 257
Query: 412 RNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPS 471
+ + + + + + P+
Sbjct: 258 MDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHES---------TLVQTPA 308
Query: 472 QMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIM 531
+V + Q + +P L LL+ + + +A + ++ + +
Sbjct: 309 LRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAV 368
Query: 532 NSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHH----RQGLLAIFKSGGIPALVKLLS 587
+ + + + +T K A + N S + + G I L LL
Sbjct: 369 ID-ANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLE 427
Query: 588 SPVESVLFYAITTLHNLLLHQEGSKMAVRL-----------AGGLQKMVLLLGRNNVKFL 636
++ + L N+L E K A L AGG++K+ N K
Sbjct: 428 IADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNENDK-- 485
Query: 637 AIVTDCLQIL 646
I +I+
Sbjct: 486 -IYEKAYKII 494
Score = 74.7 bits (182), Expect = 2e-14
Identities = 73/437 (16%), Positives = 147/437 (33%), Gaps = 28/437 (6%)
Query: 102 PELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRH-AIMN 160
E + DQ + +P++ + LN +D A + Q+ +E ++
Sbjct: 57 DEEDESSVSADQQFYSQLQQELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVI 116
Query: 161 SPQMVAALVHAISNSNDLETTKGAVGTLHNL-SHHRQGLLAIFKSGGIPALVKLLSSPVE 219
+V LV + + A L N+ S + + +P ++LL +
Sbjct: 117 QAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSV 176
Query: 220 SVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQ 279
V AI L N+ + V ++ ++ L N + T L L G +
Sbjct: 177 EVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKK 236
Query: 280 ESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMH 339
+ SQ L +++ S D E L+ + + A+++ + L
Sbjct: 237 PQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVEL 296
Query: 340 LGHPSQRLVQNCLWTLRNLSDAGT--------------KVSLLFNEIENIQRVAAGLLCE 385
L H S + L + N+ LL + ENI++ A +
Sbjct: 297 LSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISN 356
Query: 386 L-AQDKEGAETIEAEGATAPLTDLLHSRNEGVEI--------LIQGVHKIFKIHKINIHR 436
+ A + E + + PL LL + G + I + + +
Sbjct: 357 ITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQ 416
Query: 437 GCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIP 496
GC+ + L + +EI + A++ + + + K A IN D +
Sbjct: 417 GCI---KPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGME 473
Query: 497 ELIKLLNDEDQVVVSQA 513
++ +E+ + +A
Sbjct: 474 KIFNCQQNENDKIYEKA 490
Score = 65.9 bits (159), Expect = 1e-11
Identities = 65/419 (15%), Positives = 125/419 (29%), Gaps = 55/419 (13%)
Query: 2 EMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTLVTAS 61
+V LV + + A L N++ +
Sbjct: 119 GVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDAD---------------- 162
Query: 62 SNNTLILQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATR 121
A+P I+LL + + A A+ + D D L
Sbjct: 163 ----------------AVPLFIQLLYTGSVEVKEQAIWAL--GNVAGDSTDYRDYVLQCN 204
Query: 122 AIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETT 181
A+ ++ L N ++ A + L + + + Q + L I + +
Sbjct: 205 AMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLV 264
Query: 182 KGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKM 241
+ ++ + A+ LV+LLS V A+ + N++ +
Sbjct: 265 DACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQ 324
Query: 242 AVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSY 301
V AG L + LLL + + GN E ++ + LV+++
Sbjct: 325 VVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVA 384
Query: 302 DYEKLLWCTSRVLKVLSVCSSNKPAI----VEAGGMQALAMHLGHPSQRLVQNCLWTLRN 357
+Y+ + S +P I V G ++ L L R+++ L L N
Sbjct: 385 EYK-TKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALEN 443
Query: 358 LSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTDLLHSRNEGV 416
+ G N E A+ IE G + + + N+ +
Sbjct: 444 ILKMGEADKEARGLNIN----------------ENADFIEKAGGMEKIFNCQQNENDKI 486
Score = 59.7 bits (143), Expect = 1e-09
Identities = 47/279 (16%), Positives = 94/279 (33%), Gaps = 8/279 (2%)
Query: 494 AIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETT 553
A+P I+LL V QA + ++ + + ++ + NSN
Sbjct: 163 AVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILG-LFNSNKPSLI 221
Query: 554 KGAVGTLHNLSHHRQGLLAIFK-SGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSK 612
+ A TL NL ++ S +P L KL+ S L A + L + +
Sbjct: 222 RTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAI 281
Query: 613 MAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRS 672
AV +++V LL + + + GN +++ + L ++ S
Sbjct: 282 QAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSS 341
Query: 673 YDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSD 732
+ + + + A+++A + L L + + W + N S
Sbjct: 342 PKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASS 401
Query: 733 AGTKVDGL------ESLLQSLVQLLASQDINVITCAAGV 765
G + + + ++ L LL D +I
Sbjct: 402 GGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDA 440
Score = 52.8 bits (125), Expect = 2e-07
Identities = 58/371 (15%), Positives = 122/371 (32%), Gaps = 28/371 (7%)
Query: 621 LQKMVLLLGRNNVKF-LAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLL 679
L +M L ++++ L+ QIL+ ++ +++ + LV MR E L
Sbjct: 78 LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQ 137
Query: 680 WCTSRVLKVLSVCSSNKP-AIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKV- 737
+ L ++ +S + +V+A + L S + + +W L N++ T
Sbjct: 138 LEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYR 197
Query: 738 --DGLESLLQSLVQLLASQDINVITCAAGVTV------------CQVGGVEALVQTIVNA 783
+ ++ ++ L S ++I A V + ++ +
Sbjct: 198 DYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYS 257
Query: 784 GDREEITEPADHSVNMWQQQNYLVDSGIHSGVNTNAPSLTGKEEDMDGDQLMFEMDQGFG 843
D E + + + + + I + L E + + +
Sbjct: 258 MDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVT 317
Query: 844 QGFTQDQVTVCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLN 903
Q QV G + AL + + +E I + A + ++T+ + E A ++
Sbjct: 318 GNDLQTQVV-INAGVLPALRLLLSS--PKENIKKEACWTISNITAGNTEQIQAV----ID 370
Query: 904 YGIQTIVNLLNPPSRWPLVKAVIGLIRNLALCQANHAP----LREYGAIHLLVILLNRAF 959
+ + L + + K I N + L G I L LL A
Sbjct: 371 ANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIAD 430
Query: 960 TDTQRVSRTGL 970
V+ L
Sbjct: 431 NRIIEVTLDAL 441
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein
1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Length = 1207
Score = 65.5 bits (158), Expect = 2e-11
Identities = 80/685 (11%), Positives = 196/685 (28%), Gaps = 48/685 (7%)
Query: 68 LQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELI 127
++ D D + + ++KLL D++ + +LA + + L+ + + + L
Sbjct: 36 IKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQ------VETIVDTLC 89
Query: 128 KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMN-----SPQMVAALVHAISNSNDLETTK 182
+ + + + +++ + + + + ++ L AI+ D+
Sbjct: 90 TNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQL 149
Query: 183 GAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMA 242
A+ + ++ + GLL F + L+ L+SP +V I L +L++
Sbjct: 150 EALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFV 209
Query: 243 VRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYD 302
+ L + L +++ C+ ++ L P+ + + D
Sbjct: 210 DLIEHLLSE---LSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVV-KFCNVDD 265
Query: 303 YEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAG 362
E +C + C V + +L + + + G
Sbjct: 266 DELREYCIQAFESFVRRCPKEVYPHVST-IINICLKYLTYDPNYNYDDEDEDENAMDADG 324
Query: 363 TK---------VSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTDLLHSRN 413
S + ++R AA L + + + + L R
Sbjct: 325 GDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKERE 384
Query: 414 EGV-EILIQGVHKIFKIHK-INIHRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPS 471
E V + + K + + E E + + +Q +++ E S
Sbjct: 385 ENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKS 444
Query: 472 QMLKHAVVNLINY------QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVH-QLSKKE 524
+ N++ +P +I LND+ + + +
Sbjct: 445 VKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCN 504
Query: 525 ASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVK 584
S Q + V A + T A+ L + L P +
Sbjct: 505 HSPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKD 564
Query: 585 LLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQ 644
L + T+ L ++ R + ++ + + + + LQ
Sbjct: 565 LFT-----------CTIKRLKAADIDQEVKERAISCMGQI---ICNLGDNLGSDLPNTLQ 610
Query: 645 ILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGG 704
I + + + + D +L +L + +
Sbjct: 611 IFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSA 670
Query: 705 MQALAMHLGHPSQRLVQNCLWTLRN 729
+ L + + + +
Sbjct: 671 LDILIKNYSDSLTAAMIDAVLDELP 695
Score = 51.7 bits (122), Expect = 4e-07
Identities = 43/280 (15%), Positives = 90/280 (32%), Gaps = 26/280 (9%)
Query: 75 ATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDED-QDDADLATRAIPELIKLLNDE 133
A+ I L++ + D+D A +L+ L + + D D + + ++KLL D+
Sbjct: 1 ASYHISNLLEKMTSSDKD---FRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDK 57
Query: 134 DQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSH 193
+ V + A + L K +V L + + + ++
Sbjct: 58 NGEVQNLAVKCLGPLVSKVKEYQV----ETIVDTLCTNMLSDKEQLRDISSI-------- 105
Query: 194 HRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMV 253
GL + + L++ V + L + + QE + + + M+
Sbjct: 106 ---GLKTVIGELPPASSGSALAANVCKKI---TGRLTSAIAKQEDVSVQLEALDIMADML 159
Query: 254 LLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRV 313
G V F + CL + + LV + + L+ +
Sbjct: 160 SRQGGLLVNFHPSILTCLLPQL-TSPRLAVRKRTIIALGHLVMSCGNIVFVDLI---EHL 215
Query: 314 LKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLW 353
L LS S + A++ GH ++ +
Sbjct: 216 LSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIP 255
Score = 39.7 bits (91), Expect = 0.002
Identities = 16/144 (11%), Positives = 40/144 (27%), Gaps = 12/144 (8%)
Query: 72 ADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLN 131
L+K ++ ++ + +L + + +P L L
Sbjct: 923 KPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPET----------LLPRLKGYLI 972
Query: 132 DEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNL 191
S V + + + + + DL + A+ T ++
Sbjct: 973 SGSSYARSSVVTAVKFTISD-HPQPIDPLLKNCIGDFLKTLEDP-DLNVRRVALVTFNSA 1030
Query: 192 SHHRQGLLAIFKSGGIPALVKLLS 215
+H++ L+ +P L
Sbjct: 1031 AHNKPSLIRDLLDTVLPHLYNETK 1054
Score = 35.1 bits (79), Expect = 0.057
Identities = 62/590 (10%), Positives = 168/590 (28%), Gaps = 52/590 (8%)
Query: 1 MEMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTLVTA 60
++ + V A + T A+ L + L P + L + T+
Sbjct: 514 VQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIKRL 573
Query: 61 SSNNTLILQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLAT 120
+ + D ++ RAI + +++ + + + ++ L +E
Sbjct: 574 KAADI-----DQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEITRLT--TV 626
Query: 121 RAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLET 180
+A+ + D V + + ++ R + + + L+ S+S
Sbjct: 627 KALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAM 686
Query: 181 TKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSK 240
+ L L ++ + L K+ S + + + L L+
Sbjct: 687 IDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQG 746
Query: 241 MAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESK---LIILASQGPVELVRI 297
A+ + +++ G NN+ ++ ++ + + ++ L R
Sbjct: 747 GALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRA 806
Query: 298 MRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRN 357
+ V S S A++ G + H+ Q +++ +
Sbjct: 807 CPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLG---EVGHHIDLSGQLELKSVI----- 858
Query: 358 LSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTDLLHSRNEGVE 417
+ + E ++ A+ L ++ + + S+ +
Sbjct: 859 -------LEAFSSPSEEVKSAASYALGSISVGN-------LPEYLPFVLQEITSQPKRQY 904
Query: 418 ILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHA 477
+L+ + +I + + ++ + ++
Sbjct: 905 LLLHSLKEIISS-----------------ASVVGLKPYVENIWALLLKHCECAEEGTRNV 947
Query: 478 VVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMV 537
V + + +P L L S V + +
Sbjct: 948 VAECLG-KLTLIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISD-HPQPIDPLLKNCI 1005
Query: 538 AALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLS 587
+ + + DL + A+ T ++ +H++ L+ +P L
Sbjct: 1006 GDFLKTLEDP-DLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETK 1054
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment
{Human (Homo sapiens) [TaxId: 9606]}
Length = 579
Score = 59.0 bits (142), Expect = 2e-09
Identities = 65/452 (14%), Positives = 139/452 (30%), Gaps = 44/452 (9%)
Query: 65 TLILQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIP 124
+ D+A A+ +K D + LA R + + +
Sbjct: 71 MNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIR---------VDKITEYLCE 121
Query: 125 ELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGA 184
L K L DED V AA+ V +L ++ + +L I++SN +
Sbjct: 122 PLRKCLKDEDPYVRKTAAVCVAKLHDI---NAQMVEDQGFLDSLRDLIADSNPMVVANAV 178
Query: 185 VGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL--LLHQEGSKMA 242
H L I L+ L+ E + + L N +E +
Sbjct: 179 AALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSIC 238
Query: 243 VRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYD 302
R+ L N+ L+ V ++ L ++S + + + + S +
Sbjct: 239 ERVTPRLSH------ANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGE 292
Query: 303 YEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAG 362
E L+ +++ +P I++ + + + L + L+
Sbjct: 293 PE----VQYVALRNINLIVQKRPEILKQ--EIKVFFVKYNDPIYVKLEKLDIMIRLASQA 346
Query: 363 TKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTDLLHSRNEGVEILIQG 422
++ + E++ A G I+ E + L ++++
Sbjct: 347 N-IAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTL------LDLIQTK 399
Query: 423 VHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLI 482
V+ + + + I +P E I D+ + A++ ++
Sbjct: 400 VNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLD----------EPDARAAMIWIV 449
Query: 483 -NYQDDADLATRAIPELIKLLNDEDQVVVSQA 513
Y + D A + ++ +DE V
Sbjct: 450 GEYAERIDNADELLESFLEGFHDESTQVQLTL 481
Score = 55.9 bits (134), Expect = 2e-08
Identities = 42/348 (12%), Positives = 111/348 (31%), Gaps = 29/348 (8%)
Query: 461 PTAVQRLTEPSQMLKHAVVNLI--NYQDDADLATRA--IPELIKLLNDEDQVVVSQAAMM 516
+ L + ++ + + +A + + L L+ D + +VV+ A
Sbjct: 121 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAA 180
Query: 517 VHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKS 576
+ ++S+ + + + +PQ + L+ A++ + + L N +
Sbjct: 181 LSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIF-ILDCLSNYNPKDDREAQSI-- 237
Query: 577 GGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFL 636
+ LS +V+ A+ L L + L+K+ L
Sbjct: 238 --CERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML--LKKLAPPLVTLLSGEP 293
Query: 637 AIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLS--VCSS 694
+ L+ + LI+ ++ + Y ++ L ++ +
Sbjct: 294 EVQYVALRNIN-------LIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQA 346
Query: 695 NKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDGLESLLQSLVQLLASQ 754
N ++ L + V+ + + + + E + +L+ L+ ++
Sbjct: 347 NIAQVLA-----ELKEYATEVDVDFVRKAVRAIGRCAIKVEQS--AERCVSTLLDLIQTK 399
Query: 755 DINVITCAAGVTVCQVGGVEALVQTIVNAGDR--EEITEPADHSVNMW 800
V+ A V ++I+ + + EP + +W
Sbjct: 400 VNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIW 447
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 264
Score = 55.8 bits (133), Expect = 5e-09
Identities = 37/226 (16%), Positives = 77/226 (34%), Gaps = 9/226 (3%)
Query: 443 ETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATR-----AIPE 497
E ++ + + S A Q Q + A+ L + ++ D A +
Sbjct: 5 EQMKSCLRVLSQPMPPTAGEAEQ--AADQQEREGALELLADLCENMDNAADFCQLSGMHL 62
Query: 498 LI-KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGA 556
L+ + L + +AA ++ S+ A+ + + L+ + A
Sbjct: 63 LVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKA 122
Query: 557 VGTLHNLS-HHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAV 615
+ + L GLL + G L++ + V+ + + L NLL+ K +
Sbjct: 123 LFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTL 182
Query: 616 RLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQ 661
G +Q++V L+ + F V L L + +
Sbjct: 183 CSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDFPQGVRECREPE 228
Score = 50.0 bits (118), Expect = 4e-07
Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 4/219 (1%)
Query: 75 ATRAIPELIKLLNDEDQDDADLATR--AIPELIKLLNDEDQDDADLATRAIPELI-KLLN 131
R + + + E + AD R A+ L L + D + L+ + L
Sbjct: 10 CLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLE 69
Query: 132 DEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNL 191
+ +AA ++ S+ A+ + + L+ + A+ + L
Sbjct: 70 AGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCL 129
Query: 192 S-HHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQ 250
GLL + G L++ + V+ + + L NLL+ K + G +Q
Sbjct: 130 VREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQ 189
Query: 251 KMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQ 289
++V L+ + F V L L + +
Sbjct: 190 QLVALVRTEHSPFHEHVLGALCSLVTDFPQGVRECREPE 228
Score = 47.7 bits (112), Expect = 2e-06
Identities = 35/267 (13%), Positives = 76/267 (28%), Gaps = 35/267 (13%)
Query: 7 LVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTL 66
+ D + +GA+ L +L + + G+ LV
Sbjct: 21 TAGEAEQAADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGR-------------- 66
Query: 67 ILQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPEL 126
L A + I + N + L A+ +L
Sbjct: 67 ------------------YLEAGAAGLRWRAAQLIGTCSQ--NVAAIQEQVLGLGALRKL 106
Query: 127 IKLLND-EDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAV 185
++LL+ V +A + L +++ + + L+ A+ K A
Sbjct: 107 LRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAF 166
Query: 186 GTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRL 245
+ L H + + G + LV L+ + + + L +L+ R
Sbjct: 167 LLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDFPQGVRECRE 226
Query: 246 AGGLQKMVLLLGRNNVKFLAIVTDCLQ 272
+ +L ++ + L+
Sbjct: 227 PELGLEELLRHRCQLLQQHEEYQEELE 253
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 54.4 bits (130), Expect = 4e-08
Identities = 60/398 (15%), Positives = 124/398 (31%), Gaps = 41/398 (10%)
Query: 2 EMVAALVHAISN--SNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKT--L 57
++ + A++ SN + + L + L+ + A+ L+
Sbjct: 63 DIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLI----NNAIKNDLASRNPT 118
Query: 58 VTASSNNTLILQDDADLATRAIPELIKLLNDEDQDDA--DLATRAIPELIKLLNDEDQDD 115
+ + + ++A E+ K+L D D+ A + L + D
Sbjct: 119 FMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMG 178
Query: 116 ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNS 175
++ LLND+ VV+ A ++ L++K S + S S
Sbjct: 179 -----DWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSAS 233
Query: 176 NDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLH 235
DL+ LS LL + PA+ L+ +E++L A + +
Sbjct: 234 TDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQ 293
Query: 236 QEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV--- 292
+K AV +++ + Q L + + + L S +
Sbjct: 294 HSNAKNAVLFE--AISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASS 351
Query: 293 ---------ELVRIMRSYDYEKLLWCTSRVLKVLS--VCSSNKPAIVEAGGMQALAMHLG 341
+ ++ + E+ + R + +L SN IV + +L
Sbjct: 352 EFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVA-----EMLSYLE 406
Query: 342 HPSQRLVQNCLWTLRNL-----SDAGTKVSLLFNEIEN 374
+ + + + L D V + N I
Sbjct: 407 TADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRI 444
Score = 54.0 bits (129), Expect = 6e-08
Identities = 46/303 (15%), Positives = 97/303 (32%), Gaps = 26/303 (8%)
Query: 476 HAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQ 535
++ L D ++ LLND+ VV+ A ++ L++K S
Sbjct: 162 LCLLRLYRTSPDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLA 221
Query: 536 MVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLF 595
+ S S DL+ LS LL + PA+ L+ +E++L
Sbjct: 222 VSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILN 281
Query: 596 YAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKL 655
A + + +K AV +++ + Q L + +
Sbjct: 282 KAQEPPKSKKVQHSNAKNAVLFE--AISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRY 339
Query: 656 IILASQGPV------------ELVRIMRSYDYEKLLWCTSRVLKVLS--VCSSNKPAIVE 701
+ L S + + ++ + E+ + R + +L SN IV
Sbjct: 340 LALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVA 399
Query: 702 AGGMQALAMHLGHPSQRLVQNCLWTLRNL-----SDAGTKVDGLESLLQSLVQLLASQDI 756
+ +L + + + + L D VD + +L++ ++ +
Sbjct: 400 -----EMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVW 454
Query: 757 NVI 759
+
Sbjct: 455 YRV 457
Score = 43.2 bits (101), Expect = 1e-04
Identities = 43/313 (13%), Positives = 93/313 (29%), Gaps = 43/313 (13%)
Query: 457 DTAQPTAVQRLTEPSQMLKH----AVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQ 512
D AV L+ K + L+N +++L + L + +
Sbjct: 65 DFGHMEAVNLLSSNRYTEKQIGYLFISVLVN--SNSELIRLINNAIKNDLASRNPTFMGL 122
Query: 513 AAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLA 572
A + A + S +M A I T +V L R +
Sbjct: 123 ALHCI-----------ANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTS 171
Query: 573 ---IFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLG 629
+ +V LL+ V+ A + + L ++ +
Sbjct: 172 PDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNP------------EEFKTSVS 219
Query: 630 RNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVL 689
+ IVT L + + A V+L+R+++ Y + R+ + L
Sbjct: 220 LAVSRLSRIVTSASTDL---QDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECL 276
Query: 690 SVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDGLESLLQSLVQ 749
+ ++ +Q + ++ + + + ++ + L L Q
Sbjct: 277 ETILNKAQEPPKSKKVQ-----HSNAKNAVLFEAISLIIHHD---SEPNLLVRACNQLGQ 328
Query: 750 LLASQDINVITCA 762
L ++ N+ A
Sbjct: 329 FLQHRETNLRYLA 341
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein
phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 588
Score = 47.1 bits (110), Expect = 8e-06
Identities = 74/578 (12%), Positives = 161/578 (27%), Gaps = 39/578 (6%)
Query: 77 RAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQV 136
R EL+ L D D+ ++ +L + +P L L E+ V
Sbjct: 45 RTRSELLPFLTDTIYDEDEVLLALAEQLGTFT--TLVGGPEYVHCLLPPLESLATVEETV 102
Query: 137 VVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQ 196
V +A + +S + + LV ++ + + A G
Sbjct: 103 VRDKAVESLRAISHEHSPSDLE----AHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVS 158
Query: 197 GLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLL 256
+ K+ L S V A + L E + + +
Sbjct: 159 ---SAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDE 215
Query: 257 GRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKV 316
+ + L L++ + E Y
Sbjct: 216 QDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTEL------ 269
Query: 317 LSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQ 376
+ P I + + A + + ++ + + + I
Sbjct: 270 ---QKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQIL 326
Query: 377 RVAAGLLCELAQDKEGAETIEAEGATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINI-H 435
L+ + Q + A G + L + L Q + ++ I +
Sbjct: 327 PCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISN 386
Query: 436 RGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAI 495
C+ + + + A R+ + + + +
Sbjct: 387 LDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVE---FFDEKLN 443
Query: 496 PELIKLLNDEDQVVVSQAAMMVHQLSK---KEASRHAIMNSPQMVAALVHAISNSNDLET 552
+ L D + A + +L + KE + I+ P+++A N T
Sbjct: 444 SLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATII--PKVLAMSGD--PNYLHRMT 499
Query: 553 TKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSK 612
T + L + I +P ++++ PV +V F +L + + S
Sbjct: 500 TLFCINVLSEVCGQD-----ITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNST 554
Query: 613 MAVRLAGGLQKMVLLLGRN-NVKFLAIVTDCLQILAYG 649
+ + L+K L ++ +VK+ A + L +L+
Sbjct: 555 LQSEVKPILEK--LTQDQDVDVKYFA--QEALTVLSLA 588
Score = 28.2 bits (61), Expect = 6.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 70 DDADLATRAIPELIKLLNDEDQDDADLATRAIPEL 104
D++ L + P L KL D+D D A A+ L
Sbjct: 551 DNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVL 585
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli
[TaxId: 562]}
Length = 276
Score = 44.8 bits (104), Expect = 3e-05
Identities = 19/151 (12%), Positives = 42/151 (27%), Gaps = 26/151 (17%)
Query: 85 LLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATR---------AIPELIKLLNDEDQ 135
L N + + D EL +LL+D + + R A+ I+ +D++
Sbjct: 12 LYNQCKKLNDD-------ELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNY 64
Query: 136 VVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHR 195
+ A ++ Q+ + + L + N A+ +
Sbjct: 65 IRRDIGAFILGQIKICKKCE------DNVFNILNNMALNDKSACVRATAIESTAQRCKKN 118
Query: 196 QGLLAIFKSGGIPALVKLLSSPVESVLFYAI 226
I+ + +V
Sbjct: 119 ----PIYSPKIVEQSQITAFDKSTNVRRATA 145
Score = 37.5 bits (85), Expect = 0.005
Identities = 12/135 (8%), Positives = 38/135 (28%), Gaps = 14/135 (10%)
Query: 464 VQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKK 523
+ L + + + + + ++ + D A+ I+ +D++ + A ++ Q+
Sbjct: 25 FRLLDDHNSLKRISSARVLQLRGGQD----AVRLAIEFCSDKNYIRRDIGAFILGQIKIC 80
Query: 524 EASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALV 583
+ + L + N A+ + I+ +
Sbjct: 81 KKCE------DNVFNILNNMALNDKSACVRATAIESTAQRCKKN----PIYSPKIVEQSQ 130
Query: 584 KLLSSPVESVLFYAI 598
+V
Sbjct: 131 ITAFDKSTNVRRATA 145
Score = 28.3 bits (61), Expect = 5.1
Identities = 9/75 (12%), Positives = 24/75 (32%), Gaps = 12/75 (16%)
Query: 494 AIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETT 553
EL +LL+D + + +A ++ ++A V + + +
Sbjct: 20 NDDELFRLLDDHNSLKRISSARVLQLRGGQDA-----------VRLAIEFC-SDKNYIRR 67
Query: 554 KGAVGTLHNLSHHRQ 568
L + ++
Sbjct: 68 DIGAFILGQIKICKK 82
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter
vinelandii [TaxId: 354]}
Length = 233
Score = 39.3 bits (91), Expect = 0.001
Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 78 AIPELIKLLNDEDQDDADLATRAIPE--LIKLLNDEDQDDADLATRA--IPELIKLLNDE 133
+ L L+ D D+ +P L L+ DED++ + +L ++ D
Sbjct: 67 PVEALTPLIRDSDEVVRRAVAYRLPREQLSALMFDEDREVRITVADRLPLEQLEQMAADR 126
Query: 134 DQVVVSQA 141
D +V +
Sbjct: 127 DYLVRAYV 134
Score = 38.6 bits (89), Expect = 0.002
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 79 IPELIKLLNDEDQDDADLATRAIPE--LIKLLNDEDQDDADLATR--AIPELIKLLNDED 134
+ +L ++ D D + IP L + + DED+ L + L + D +
Sbjct: 116 LEQLEQMAADRDYLVRAYVVQRIPPGRLFRFMRDEDRQVRKLVAKRLPEESLGLMTQDPE 175
Query: 135 QVVVSQAAMMVH 146
V A +
Sbjct: 176 PEVRRIVASRLR 187
Score = 35.5 bits (81), Expect = 0.020
Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 82 LIKLLNDEDQDDADLATR--AIPELIKLLNDEDQDDADLATR--AIPELIKLLNDEDQVV 137
L + + DED+ L + L + D + + + +L++LL+D D V
Sbjct: 143 LFRFMRDEDRQVRKLVAKRLPEESLGLMTQDPEPEVRRIVASRLRGDDLLELLHDPDWTV 202
Query: 138 VSQAA 142
A
Sbjct: 203 RLAAV 207
Score = 30.5 bits (68), Expect = 0.89
Identities = 29/162 (17%), Positives = 48/162 (29%), Gaps = 17/162 (10%)
Query: 102 PELI-KLLNDEDQDDADLATR--AIPELIKLLNDEDQVVVSQAAMM-----VHQLSKKEA 153
P L + L D + +A R + L L+ D D+VV A + L E
Sbjct: 44 PHLAVQYLADPFWERRAIAVRYSPVEALTPLIRDSDEVVRRAVAYRLPREQLSALMFDED 103
Query: 154 SRHAIMNSPQMVAALVHAISNSNDLETTKGAVG-----TLHNLSHHRQGLL--AIFKSGG 206
I + ++ + ++ D V L + + K
Sbjct: 104 REVRITVADRLPLEQLEQMAADRDYLVRAYVVQRIPPGRLFRFMRDEDRQVRKLVAKRLP 163
Query: 207 IPALVKLLSSPVESVLFYAITTLHNLLLHQ--EGSKMAVRLA 246
+L + P V + L L + VRLA
Sbjct: 164 EESLGLMTQDPEPEVRRIVASRLRGDDLLELLHDPDWTVRLA 205
Score = 28.2 bits (62), Expect = 4.3
Identities = 23/139 (16%), Positives = 39/139 (28%), Gaps = 14/139 (10%)
Query: 494 AIPELIKLLNDEDQVVVSQAAMM-----VHQLSKKEASRHAIMNSPQMVAALVHAISNSN 548
+ L L+ D D+VV A + L E I + ++ + ++
Sbjct: 67 PVEALTPLIRDSDEVVRRAVAYRLPREQLSALMFDEDREVRITVADRLPLEQLEQMAADR 126
Query: 549 DLETTKGAVG-----TLHNLSHHRQGLL--AIFKSGGIPALVKLLSSPVESVLFYAITTL 601
D V L + + K +L + P V + L
Sbjct: 127 DYLVRAYVVQRIPPGRLFRFMRDEDRQVRKLVAKRLPEESLGLMTQDPEPEVRRIVASRL 186
Query: 602 HNLLLHQ--EGSKMAVRLA 618
L + VRLA
Sbjct: 187 RGDDLLELLHDPDWTVRLA 205
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 111
Score = 33.4 bits (75), Expect = 0.026
Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 18/90 (20%)
Query: 72 ADLATRAIPELIKLLNDEDQDDADLATR---------AIPELIKLLNDEDQDDADLATRA 122
+ + A L++ L++ED A A+ LIKLL D+ A R+
Sbjct: 17 SRMGDEAFEPLLESLSNEDWRIRGAAAWIIGNFQDERAVEPLIKLLEDDSGFVRSGAARS 76
Query: 123 ---------IPELIKLLNDEDQVVVSQAAM 143
+ KL A
Sbjct: 77 LEQIGGERVRAAMEKLAETGTGFARKVAVN 106
Score = 33.0 bits (74), Expect = 0.038
Identities = 21/144 (14%), Positives = 45/144 (31%), Gaps = 36/144 (25%)
Query: 86 LNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVVSQAAMMV 145
+ DE++ + A+ + + A L++ L++ED + AA ++
Sbjct: 1 MADENKWVRRDVSTAL--------------SRMGDEAFEPLLESLSNEDWRIRGAAAWII 46
Query: 146 HQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSG 205
+ V L+ + + + GA +L + R
Sbjct: 47 GN-----------FQDERAVEPLIKLLEDDSG-FVRSGAARSLEQIGGERV--------- 85
Query: 206 GIPALVKLLSSPVESVLFYAITTL 229
A+ KL + A+ L
Sbjct: 86 -RAAMEKLAETGTGFARKVAVNYL 108
Score = 33.0 bits (74), Expect = 0.046
Identities = 18/114 (15%), Positives = 37/114 (32%), Gaps = 22/114 (19%)
Query: 488 ADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNS 547
+ + A L++ L++ED + AA ++ + V L+ + +
Sbjct: 17 SRMGDEAFEPLLESLSNEDWRIRGAAAWIIGN-----------FQDERAVEPLIKLLEDD 65
Query: 548 NDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTL 601
+ GA +L + R A+ KL + A+ L
Sbjct: 66 SG-FVRSGAARSLEQIGGERV----------RAAMEKLAETGTGFARKVAVNYL 108
>d1nria_ c.80.1.3 (A:) Hypothetical protein HI0754 {Haemophilus
influenzae [TaxId: 727]}
Length = 248
Score = 29.7 bits (66), Expect = 1.4
Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 55 KTLVTASSNNTLILQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKL 107
TL+T N + D+ ++ E+++L+N+ED+ +P++
Sbjct: 2 STLITEQRN-----PNSVDIDRQSTLEIVRLMNEEDKLVPLAIESCLPQISLA 49
Score = 28.6 bits (63), Expect = 3.6
Identities = 7/36 (19%), Positives = 19/36 (52%)
Query: 94 ADLATRAIPELIKLLNDEDQDDADLATRAIPELIKL 129
D+ ++ E+++L+N+ED+ +P++
Sbjct: 14 VDIDRQSTLEIVRLMNEEDKLVPLAIESCLPQISLA 49
>d2ffja1 e.50.1.1 (A:7-288) Hypothetical protein AF1104
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 282
Score = 27.5 bits (61), Expect = 7.3
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 67 ILQDDADLATRAIPELIKLLNDEDQDD---ADLATRAIPELIKLLNDED------QDDAD 117
++ DD DL ++ + E +K+L + A LATR + ++L ED +
Sbjct: 15 LVTDDEDLISQCVDESLKILAENYSSRPINAHLATRIHRRVYEILGVEDPYAEVKARANE 74
Query: 118 LATRAIPELIKLLN 131
+A + +P +++
Sbjct: 75 VARQVLPLAKEIVE 88
>d1hfel1 c.96.1.1 (L:87-398) Fe-only hydrogenase larger subunit,
C-domain {Desulfovibrio desulfuricans [TaxId: 876]}
Length = 312
Score = 27.6 bits (61), Expect = 8.5
Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 8/90 (8%)
Query: 123 IPELIKLLNDEDQVVVSQAAMMVH-QLSKKEASRHAIMNSPQMVAAL-------VHAISN 174
+PE+ K L D ++ A V L + + +M+AAL
Sbjct: 2 VPEVEKKLKDGKVKCIAMPAPAVRYALGDAFGMPVGSVTTGKMLAALQKLGFAHCWDTEF 61
Query: 175 SNDLETTKGAVGTLHNLSHHRQGLLAIFKS 204
+ D+ + + L+ L F S
Sbjct: 62 TADVTIWEEGSEFVERLTKKSDMPLPQFTS 91
Score = 27.6 bits (61), Expect = 8.5
Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 8/90 (8%)
Query: 495 IPELIKLLNDEDQVVVSQAAMMVH-QLSKKEASRHAIMNSPQMVAAL-------VHAISN 546
+PE+ K L D ++ A V L + + +M+AAL
Sbjct: 2 VPEVEKKLKDGKVKCIAMPAPAVRYALGDAFGMPVGSVTTGKMLAALQKLGFAHCWDTEF 61
Query: 547 SNDLETTKGAVGTLHNLSHHRQGLLAIFKS 576
+ D+ + + L+ L F S
Sbjct: 62 TADVTIWEEGSEFVERLTKKSDMPLPQFTS 91
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.133 0.376
Gapped
Lambda K H
0.267 0.0534 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,230,722
Number of extensions: 143492
Number of successful extensions: 572
Number of sequences better than 10.0: 1
Number of HSP's gapped: 432
Number of HSP's successfully gapped: 70
Length of query: 986
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 892
Effective length of database: 1,116,976
Effective search space: 996342592
Effective search space used: 996342592
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.6 bits)