Query psy15606
Match_columns 80
No_of_seqs 102 out of 195
Neff 4.9
Searched_HMMs 46136
Date Fri Aug 16 17:00:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15606.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15606hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05826 Phospholip_A2_2: Phos 100.0 4.3E-40 9.3E-45 215.8 -0.9 65 16-80 1-65 (99)
2 cd04704 PLA2_bee_venom_like PL 100.0 5.3E-39 1.2E-43 210.4 2.0 66 15-80 1-66 (97)
3 cd04705 PLA2_group_III_like PL 99.9 2.2E-23 4.8E-28 137.8 1.6 50 31-80 24-73 (100)
4 cd00618 PLA2_like PLA2_like: P 99.7 1.4E-18 3E-23 108.1 1.4 62 17-80 1-75 (83)
5 smart00085 PA2c Phospholipase 99.2 4.1E-12 8.9E-17 85.2 2.1 58 12-79 15-72 (117)
6 cd04706 PLA2_plant PLA2_plant: 98.3 1.9E-07 4.1E-12 63.4 1.4 47 18-79 23-69 (117)
7 PF08398 Parvo_coat_N: Parvovi 96.7 0.00038 8.2E-09 43.1 -0.1 43 17-62 1-44 (64)
8 cd00125 PLA2c PLA2c: Phospholi 96.6 0.00085 1.8E-08 45.1 1.0 30 21-56 25-54 (115)
9 cd04707 otoconin_90 otoconin_9 96.0 0.0013 2.8E-08 44.6 -0.6 30 21-56 22-51 (117)
10 KOG4087|consensus 94.8 0.011 2.3E-07 41.7 0.6 28 29-56 38-75 (144)
11 PF00068 Phospholip_A2_1: Phos 91.6 0.039 8.4E-07 36.6 -0.6 30 22-57 27-56 (116)
12 PF08036 Antimicrobial_6: Diap 62.0 2.7 5.8E-05 23.7 0.1 13 38-50 14-26 (39)
13 PF06951 PLA2G12: Group XII se 31.5 23 0.0005 25.8 0.8 41 14-56 73-113 (184)
14 PHA03323 nuclear egress membra 23.7 48 0.001 25.7 1.4 18 15-32 20-37 (272)
15 PF13899 Thioredoxin_7: Thiore 23.4 28 0.00062 20.5 0.1 24 2-25 8-31 (82)
No 1
>PF05826 Phospholip_A2_2: Phospholipase A2; InterPro: IPR001211 Phospholipase A2 (3.1.1.4 from EC) (PLA2) is a small lipolytic enzyme that releases fatty acids from the second carbon group of glycerol. It is involved in a number of physiologically important cellular processes, such as the liberation of arachidonic acid from membrane phospholipids []. It plays a pivotal role in the biosynthesis of prostaglandin and other mediators of inflammation. PLA2 has four to seven disulphide bonds and binds a calcium ion that is essential for activity. Within the active enzyme, the alpha amino group is involved in a conserved hydrogen-bonding network linking the N-terminal region to the active site. The side chains of two conserved residues, His and Asp, participate in the catalytic network. Many PLA2's are widely distributed in snakes, lizards, bees and mammals. In mammals there are at least four forms: pancreatic, membrane-associated as well as two less well characterised forms. The venom of most snakes contains multiple forms of PLA2. Some of them are presynaptic neurotoxins which inhibit neuromuscular transmission by blocking acetylcholine release from the nerve termini. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Api m 1.; GO: 0004623 phospholipase A2 activity, 0005509 calcium ion binding, 0016042 lipid catabolic process; PDB: 1POC_A.
Probab=100.00 E-value=4.3e-40 Score=215.79 Aligned_cols=65 Identities=54% Similarity=1.110 Sum_probs=49.8
Q ss_pred eecCccccCCCCCCCCCCCCCCCCchhhhcccccCCCCcccCCCccCCeecCCCccccCCccCCC
Q psy15606 16 LVPGTKWCGYGNGATGFTDLGSFSSTDLCCRRHDSCQYTIPGFSWRYKYFNMKPFTLSHCTCDQR 80 (80)
Q Consensus 16 ~~pGTkWCG~Gn~A~~y~dLG~~~~tD~CCR~HD~C~~~I~~~~~k~gl~N~~~~T~shC~CD~r 80 (80)
|||||||||+||+|.+|+|||.+.+||+|||+||+|+++|+++++||||+|.++||+|||+||+|
T Consensus 1 i~pGT~WCG~gn~a~~~~dlG~~~~tD~CCR~HD~C~~~I~~~~~k~gl~N~~~~T~~hC~Cd~~ 65 (99)
T PF05826_consen 1 IYPGTKWCGPGNIAKNYSDLGEFKETDRCCREHDHCPDKIPPGETKYGLHNPRPFTISHCDCDSR 65 (99)
T ss_dssp B-TT-SSSBSS---SSTT---SSHHHHHHHHHHHT-SSEE-TT-EETTEE--SSS-EEBHHHHHH
T ss_pred CCCCCcccCCCCCccCcccccccHHHHHHHHhhccCCCccCCCccccccccCCcCceeecCcccH
Confidence 79999999999999999999999999999999999999999999999999999999999999964
No 2
>cd04704 PLA2_bee_venom_like PLA2_bee_venom_like: A sub-family of Phospholipase A2, similar to bee venom PLA2. PLA2 is a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. Enzymatically active PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids; secreted PLA2s have also been found to specifically bind to a variety of soluble and membrane proteins in mammals, including receptors. As a toxin, PLA2 is a potent presynaptic neurotoxin which blocks nerve terminals by binding to the nerve membrane and hydrolyzing stable membrane lipids. The products of the hydrolysis cannot form bilayers leading to a change in membrane conformation and ultimately to a block in the release of neurotransmitters. PLA2 may form dimers or oligomers. Bee venom PLA2 has fewer conserved disulfide bridges than most canonical PLA2s.
Probab=100.00 E-value=5.3e-39 Score=210.40 Aligned_cols=66 Identities=53% Similarity=1.075 Sum_probs=64.3
Q ss_pred eeecCccccCCCCCCCCCCCCCCCCchhhhcccccCCCCcccCCCccCCeecCCCccccCCccCCC
Q psy15606 15 MLVPGTKWCGYGNGATGFTDLGSFSSTDLCCRRHDSCQYTIPGFSWRYKYFNMKPFTLSHCTCDQR 80 (80)
Q Consensus 15 ~~~pGTkWCG~Gn~A~~y~dLG~~~~tD~CCR~HD~C~~~I~~~~~k~gl~N~~~~T~shC~CD~r 80 (80)
||||||||||+||+|.+|+|||.+.+||+|||+||+||++|++++++|||+|.++||++||+||.+
T Consensus 1 ~~~pGTkWCG~Gn~a~~~~dlG~~~~tD~CCr~HD~C~~~i~~~~~kyg~~N~~~~t~~~C~CD~~ 66 (97)
T cd04704 1 FIVPGTKWCGPGNIATNYSDLGAFRETDKCCREHDHCPDIISAGEYKYGLTNTRLFTRSHCDCDNR 66 (97)
T ss_pred CccCCCeecCCCCCCCCcccccCccccchHHHccccCcCcccccccccCccCCCccccccCcHHHH
Confidence 689999999999999999999999999999999999999999999999999999999999999964
No 3
>cd04705 PLA2_group_III_like PLA2_group_III_like: A sub-family of Phospholipase A2, similar to human group III PLA2. PLA2 is a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. Enzymatically active PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids; secreted PLA2s have also been found to specifically bind to a variety of soluble and membrane proteins in mammals, including receptors. As a toxin, PLA2 is a potent presynaptic neurotoxin which blocks nerve terminals by binding to the nerve membrane and hydrolyzing stable membrane lipids. The products of the hydrolysis cannot form bilayers leading to a change in membrane conformation and ultimately to a block in the release of neurotransmitters. PLA2 may form dimers or oligomers.
Probab=99.87 E-value=2.2e-23 Score=137.76 Aligned_cols=50 Identities=32% Similarity=0.584 Sum_probs=47.4
Q ss_pred CCCCCCCCCchhhhcccccCCCCcccCCCccCCeecCCCccccCCccCCC
Q psy15606 31 GFTDLGSFSSTDLCCRRHDSCQYTIPGFSWRYKYFNMKPFTLSHCTCDQR 80 (80)
Q Consensus 31 ~y~dLG~~~~tD~CCR~HD~C~~~I~~~~~k~gl~N~~~~T~shC~CD~r 80 (80)
.+.+||++.+||+|||+||+||++|.+++++|||+|.++||+|||+||.|
T Consensus 24 ~~~~lG~~~~~DrCCR~HD~Cp~~I~~~~~k~gl~N~~~~tisHCdCD~r 73 (100)
T cd04705 24 PFLSEGEFKEPDRCCWKHKQCPGHIIPPFSSDGHHNFHLHSVSHCDCDSR 73 (100)
T ss_pred cccccccccchhhhhhhhhcCccccCCcccccceecCCCcccccccHHHH
Confidence 44689999999999999999999999999999999999999999999974
No 4
>cd00618 PLA2_like PLA2_like: Phospholipase A2, a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a metal-dependent reaction, to generate lysophospholipid (LysoPL) and a free fatty acid (FA). The resulting products are either dietary or used in synthetic pathways for leukotrienes and prostaglandins. Often, arachidonic acid is released as a free fatty acid and acts as second messenger in signaling networks. Secreted PLA2s have also been found to specifically bind to a variety of soluble and membrane proteins in mammals, including receptors. As a toxin, PLA2 is a potent presynaptic neurotoxin which blocks nerve terminals by binding to the nerve membrane and hydrolyzing stable membrane lipids. The products of the hydrolysis (LysoPL and FA) cannot form bilayers leading to a change in membrane conformation and ultimately
Probab=99.72 E-value=1.4e-18 Score=108.08 Aligned_cols=62 Identities=35% Similarity=0.572 Sum_probs=56.9
Q ss_pred ecCccccCCCCCCCCCCCCCCCCchhhhcccccCCCCcccCCCccCC-------------eecCCCccccCCccCCC
Q psy15606 17 VPGTKWCGYGNGATGFTDLGSFSSTDLCCRRHDSCQYTIPGFSWRYK-------------YFNMKPFTLSHCTCDQR 80 (80)
Q Consensus 17 ~pGTkWCG~Gn~A~~y~dLG~~~~tD~CCR~HD~C~~~I~~~~~k~g-------------l~N~~~~T~shC~CD~r 80 (80)
.|+++|||.|+.+.++..++ .+||+|||+||+|++.|...+.+++ +.|..+++++||+||.+
T Consensus 1 ~~ygc~CG~g~~~~~~g~p~--D~~D~CC~~HD~Cy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~C~CD~~ 75 (83)
T cd00618 1 LPYGCYCGPGGSACPSGQPV--DETDRCCRKHDCCYDQISDGGCCDGCLSYSFSEGGVTCLTNSDLCTRSHCDCDRR 75 (83)
T ss_pred CCcCcccCCCCcCCCCCCCC--CcchhhhhhCccHhhhhhccCCCCCcceeeecCCceeECCCCChhhHhhCcccHH
Confidence 47899999999999888877 6999999999999999999998888 78999999999999963
No 5
>smart00085 PA2c Phospholipase A2.
Probab=99.22 E-value=4.1e-12 Score=85.16 Aligned_cols=58 Identities=28% Similarity=0.384 Sum_probs=47.1
Q ss_pred cCceeecCccccCCCCCCCCCCCCCCCCchhhhcccccCCCCcccCCCccCCeecCCCccccCCccCC
Q psy15606 12 SNLMLVPGTKWCGYGNGATGFTDLGSFSSTDLCCRRHDSCQYTIPGFSWRYKYFNMKPFTLSHCTCDQ 79 (80)
Q Consensus 12 ~~~~~~pGTkWCG~Gn~A~~y~dLG~~~~tD~CCR~HD~C~~~I~~~~~k~gl~N~~~~T~shC~CD~ 79 (80)
.+.++.++|+||+-|+.+.... ...||+||++||+|++.|++ +.-+. .+++++|+|+.
T Consensus 15 ~~~~~~y~~YGCyCG~gg~G~p----vD~~D~CC~~HD~Cy~~~~~-~~C~~-----~~~~y~~~c~~ 72 (117)
T smart00085 15 KRAWLSYGDYGCYCGWGGSGTP----VDATDRCCFVHDCCYGKAEK-EGCNP-----KTTTYSYSCDN 72 (117)
T ss_pred CCcccchhccCcccCCCCCCCc----cccccchhhhcCchhhhccc-CCCcc-----cccceEEEEEC
Confidence 3578999999999999887653 67999999999999999987 44443 67788888875
No 6
>cd04706 PLA2_plant PLA2_plant: Plant-specific sub-family of Phospholipase A2, a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. Enzymatically active PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids; secreted PLA2s have also been found to specifically bind to a variety of soluble and membrane proteins in mammals, including receptors. As a toxin, PLA2 is a potent presynaptic neurotoxin which blocks nerve terminals by binding to the nerve membrane and hydrolyzing stable membrane lipids. The products of the hydrolysis cannot form bilayers leading to a change in membrane conformation and ultimately to a block in the release of neurotransmitters. PLA2 may form dimers or oligomers. This sub-family does not appear to have a conserved active site and metal-binding loop.
Probab=98.33 E-value=1.9e-07 Score=63.44 Aligned_cols=47 Identities=23% Similarity=0.475 Sum_probs=35.0
Q ss_pred cCccccCCCCCCCCCCCCCCCCchhhhcccccCCCCcccCCCccCCeecCCCccccCCccCC
Q psy15606 18 PGTKWCGYGNGATGFTDLGSFSSTDLCCRRHDSCQYTIPGFSWRYKYFNMKPFTLSHCTCDQ 79 (80)
Q Consensus 18 pGTkWCG~Gn~A~~y~dLG~~~~tD~CCR~HD~C~~~I~~~~~k~gl~N~~~~T~shC~CD~ 79 (80)
--.+|||+|+.+.. ++.--..+|+||+.||+|...+ ...+.+|.||+
T Consensus 23 ~YG~yCG~g~~g~~--~~~P~D~lD~CC~~HD~Cy~~~-------------~~~~~~c~C~~ 69 (117)
T cd04706 23 RYGKYCGPGYSGCP--GERPCDDLDACCMTHDACVQAK-------------KNDYLSLECNE 69 (117)
T ss_pred ccCcccCCCCCCCC--CCCCcchhhHHHHhCcCcccCC-------------CCCcCCchHHH
Confidence 37899999997532 3335578999999999999754 23467788875
No 7
>PF08398 Parvo_coat_N: Parvovirus coat protein VP1; InterPro: IPR013607 Parvoviruses are some of the smallest viruses containing linear, non-segmented single-stranded DNA genomes, with an average genome size of 5000 nucleotides. Parvoviruses have been described that infect a wide range of invertebrates and vertebrates and are well known for causing enteric disease in mammals. Genomes contains two large ORFs: NS1 and VP1; other ORFs are found in some sub-types and different gene products can arise from splice variants and the use of different start codons []. This is the N-terminal region of the Parvovirus VP1 coat protein []; its function is not known. ; GO: 0005198 structural molecule activity, 0019028 viral capsid
Probab=96.70 E-value=0.00038 Score=43.10 Aligned_cols=43 Identities=26% Similarity=0.332 Sum_probs=32.8
Q ss_pred ecCccccCCCCCCCCCCCCCCCCchhhhcccccCCCCc-ccCCCccC
Q psy15606 17 VPGTKWCGYGNGATGFTDLGSFSSTDLCCRRHDSCQYT-IPGFSWRY 62 (80)
Q Consensus 17 ~pGTkWCG~Gn~A~~y~dLG~~~~tD~CCR~HD~C~~~-I~~~~~k~ 62 (80)
+||++++||||.-.+-.. -.++|..+|+||...+. |..+..-|
T Consensus 1 lPg~~YlGPgn~l~~g~P---v~~~D~aA~~HD~aY~~~lk~G~NPY 44 (64)
T PF08398_consen 1 LPGYKYLGPGNPLDNGEP---VNPVDAAAREHDEAYDELLKHGDNPY 44 (64)
T ss_pred CCCCCccCCCCCcCCCCC---CCHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 599999999998655544 35899999999988774 65554433
No 8
>cd00125 PLA2c PLA2c: Phospholipase A2, a family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a metal-dependent reaction, to generate lysophospholipid (LysoPL) and a free fatty acid (FA). The resulting products are either dietary or used in synthetic pathways for leukotrienes and prostaglandins. Often, arachidonic acid is released as a free fatty acid and acts as second messenger in signaling networks. Secreted PLA2s have also been found to specifically bind to a variety of soluble and membrane proteins in mammals, including receptors. As a toxin, PLA2 is a potent presynaptic neurotoxin which blocks nerve terminals by binding to the nerve membrane and hydrolyzing stable membrane lipids. The products of the hydrolysis (LysoPL and FA) cannot form bilayers leading to a change in membrane conformation and ultimately to a block in
Probab=96.60 E-value=0.00085 Score=45.12 Aligned_cols=30 Identities=37% Similarity=0.812 Sum_probs=22.2
Q ss_pred cccCCCCCCCCCCCCCCCCchhhhcccccCCCCccc
Q psy15606 21 KWCGYGNGATGFTDLGSFSSTDLCCRRHDSCQYTIP 56 (80)
Q Consensus 21 kWCG~Gn~A~~y~dLG~~~~tD~CCR~HD~C~~~I~ 56 (80)
-|||.|..-.. -..+|+||+.||.|...+.
T Consensus 25 CyCG~GG~G~P------vD~~DrCC~~HD~CY~~~~ 54 (115)
T cd00125 25 CYCGLGGSGTP------VDDTDRCCQVHDCCYDRAE 54 (115)
T ss_pred CccCCCCCCCC------cccHHHHHHHHHhHHhccc
Confidence 37887764322 2378999999999999765
No 9
>cd04707 otoconin_90 otoconin_90: Phospholipase A2-like domains present in otoconin-90 and otoconin-95, mammal proteins that are principal matrix proteins of calcitic otoconia. Interactions involving otoconin-90 may trigger or constitute key events in otoconia formation. The PLA2-like domains in otoconins may have lost their metal-binding sites.
Probab=96.03 E-value=0.0013 Score=44.56 Aligned_cols=30 Identities=23% Similarity=0.556 Sum_probs=21.1
Q ss_pred cccCCCCCCCCCCCCCCCCchhhhcccccCCCCccc
Q psy15606 21 KWCGYGNGATGFTDLGSFSSTDLCCRRHDSCQYTIP 56 (80)
Q Consensus 21 kWCG~Gn~A~~y~dLG~~~~tD~CCR~HD~C~~~I~ 56 (80)
-|||.|..-.. -.++|+||..||.|...+.
T Consensus 22 CyCG~GG~G~P------vD~~DrCC~~HD~CY~~~~ 51 (117)
T cd04707 22 CYCGQEGEGLP------VDELDRCCFQHRCCLEQAS 51 (117)
T ss_pred CcccCCCCCCC------cccchhHHHHhHHHHhhhh
Confidence 36776654221 1379999999999998653
No 10
>KOG4087|consensus
Probab=94.76 E-value=0.011 Score=41.67 Aligned_cols=28 Identities=29% Similarity=0.801 Sum_probs=21.4
Q ss_pred CCCCCCCCCC----------CchhhhcccccCCCCccc
Q psy15606 29 ATGFTDLGSF----------SSTDLCCRRHDSCQYTIP 56 (80)
Q Consensus 29 A~~y~dLG~~----------~~tD~CCR~HD~C~~~I~ 56 (80)
|.+|+.+|-+ .++|+||.+||.|.+-..
T Consensus 38 ~l~Y~~YGCyCGlGG~G~P~D~iDwCC~~HDcCY~~le 75 (144)
T KOG4087|consen 38 ALSYNKYGCYCGLGGSGQPKDAIDWCCHAHDCCYDRLE 75 (144)
T ss_pred cceecCccccccCCCCCCccchHHHHHhcccHHHHHHH
Confidence 5666666544 689999999999987543
No 11
>PF00068 Phospholip_A2_1: Phospholipase A2; InterPro: IPR001211 Phospholipase A2 (3.1.1.4 from EC) (PLA2) is a small lipolytic enzyme that releases fatty acids from the second carbon group of glycerol. It is involved in a number of physiologically important cellular processes, such as the liberation of arachidonic acid from membrane phospholipids []. It plays a pivotal role in the biosynthesis of prostaglandin and other mediators of inflammation. PLA2 has four to seven disulphide bonds and binds a calcium ion that is essential for activity. Within the active enzyme, the alpha amino group is involved in a conserved hydrogen-bonding network linking the N-terminal region to the active site. The side chains of two conserved residues, His and Asp, participate in the catalytic network. Many PLA2's are widely distributed in snakes, lizards, bees and mammals. In mammals there are at least four forms: pancreatic, membrane-associated as well as two less well characterised forms. The venom of most snakes contains multiple forms of PLA2. Some of them are presynaptic neurotoxins which inhibit neuromuscular transmission by blocking acetylcholine release from the nerve termini. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Api m 1.; GO: 0004623 phospholipase A2 activity, 0005509 calcium ion binding, 0016042 lipid catabolic process; PDB: 1OQS_F 1S6B_B 1XXW_B 1MH2_B 2RD4_B 1OZ6_A 2OSN_A 2PH4_B 1FDK_A 2BP2_A ....
Probab=91.65 E-value=0.039 Score=36.65 Aligned_cols=30 Identities=33% Similarity=0.923 Sum_probs=20.9
Q ss_pred ccCCCCCCCCCCCCCCCCchhhhcccccCCCCcccC
Q psy15606 22 WCGYGNGATGFTDLGSFSSTDLCCRRHDSCQYTIPG 57 (80)
Q Consensus 22 WCG~Gn~A~~y~dLG~~~~tD~CCR~HD~C~~~I~~ 57 (80)
|||.|.... --.++|+||+.|+.|..-+..
T Consensus 27 yCg~~g~G~------PvD~iD~~C~~h~~Cy~~~~~ 56 (116)
T PF00068_consen 27 YCGFGGKGQ------PVDEIDRCCRKHDQCYKCAKE 56 (116)
T ss_dssp TBSSSSSSS-------SSHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCCC------CcccccchhHHhHHHHHHHhc
Confidence 888765321 134799999999999775543
No 12
>PF08036 Antimicrobial_6: Diapausin family of antimicrobial peptide; InterPro: IPR012525 This family consists of diapausin-related antimicrobial peptides. Diapause during periods of environmental adversity is an essential part of the life cycle of many organisms with the molecular basis being different among animals. Diapause-specific peptides provide anti-fungal activity and act as N-type voltage-gated calcium channel blocker [].; GO: 0050832 defense response to fungus, 0005576 extracellular region; PDB: 2E2F_A.
Probab=62.01 E-value=2.7 Score=23.69 Aligned_cols=13 Identities=38% Similarity=0.864 Sum_probs=10.0
Q ss_pred CCchhhhcccccC
Q psy15606 38 FSSTDLCCRRHDS 50 (80)
Q Consensus 38 ~~~tD~CCR~HD~ 50 (80)
..+-|.|||+|-+
T Consensus 14 ~~Er~eCCrAhG~ 26 (39)
T PF08036_consen 14 VPERDECCRAHGY 26 (39)
T ss_dssp STTTHHHHHHTT-
T ss_pred chhHHHHHHHcCc
Confidence 3578999999975
No 13
>PF06951 PLA2G12: Group XII secretory phospholipase A2 precursor (PLA2G12); InterPro: IPR010711 This family consists of several group XII secretory phospholipase A2 precursor (PLA2G12) (3.1.1.4 from EC) proteins. Group XII and group V PLA(2)s are thought to participate in helper T cell immune response through release of immediate second signals and generation of downstream eicosanoids [].; GO: 0004623 phospholipase A2 activity, 0005509 calcium ion binding, 0016042 lipid catabolic process, 0005576 extracellular region
Probab=31.49 E-value=23 Score=25.79 Aligned_cols=41 Identities=24% Similarity=0.344 Sum_probs=24.7
Q ss_pred ceeecCccccCCCCCCCCCCCCCCCCchhhhcccccCCCCccc
Q psy15606 14 LMLVPGTKWCGYGNGATGFTDLGSFSSTDLCCRRHDSCQYTIP 56 (80)
Q Consensus 14 ~~~~pGTkWCG~Gn~A~~y~dLG~~~~tD~CCR~HD~C~~~I~ 56 (80)
.+-+|=-+-||+--....++. | ....-.||-+||.|.++=.
T Consensus 73 g~k~p~~NGCGS~~~G~~~d~-~-iP~~t~CCn~HDiCYdTCg 113 (184)
T PF06951_consen 73 GYKPPEPNGCGSYFLGLQIDI-G-IPAMTKCCNQHDICYDTCG 113 (184)
T ss_pred CCCCCCCCCCCCcccCCcccC-C-CCchhccchhhhhHHHccC
Confidence 345566778887221111222 2 2237899999999998643
No 14
>PHA03323 nuclear egress membrane protein UL34; Provisional
Probab=23.75 E-value=48 Score=25.65 Aligned_cols=18 Identities=33% Similarity=0.649 Sum_probs=15.4
Q ss_pred eeecCccccCCCCCCCCC
Q psy15606 15 MLVPGTKWCGYGNGATGF 32 (80)
Q Consensus 15 ~~~pGTkWCG~Gn~A~~y 32 (80)
+|+||++-||.|+.....
T Consensus 20 LvV~g~L~~g~gd~~~~~ 37 (272)
T PHA03323 20 LVVPGNLRCGEGDAGLYE 37 (272)
T ss_pred EEeccCccccCCCCCCCC
Confidence 699999999999986543
No 15
>PF13899 Thioredoxin_7: Thioredoxin-like; PDB: 2LST_A 3PH9_A 1UC7_A 2JU5_A 1VRS_D 2FWG_A 2FWF_A 2FWH_A 2FWE_A 3FK8_A ....
Probab=23.38 E-value=28 Score=20.52 Aligned_cols=24 Identities=21% Similarity=0.379 Sum_probs=18.0
Q ss_pred chhhhhhhcccCceeecCccccCC
Q psy15606 2 STLDRLKLGLSNLMLVPGTKWCGY 25 (80)
Q Consensus 2 ~~~~~~~~~~~~~~~~pGTkWCG~ 25 (80)
++|+..|++-...+++=|..||+.
T Consensus 8 ~al~~A~~~~kpvlv~f~a~wC~~ 31 (82)
T PF13899_consen 8 EALAEAKKEGKPVLVDFGADWCPP 31 (82)
T ss_dssp HHHHHHHHHTSEEEEEEETTTTHH
T ss_pred HHHHHHHHcCCCEEEEEECCCCHh
Confidence 356666776667788889999974
Done!