RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15606
         (80 letters)



>d1poca_ a.133.1.1 (A:) Phospholipase A2 {European honeybee (Apis
          mellifera) [TaxId: 7460]}
          Length = 134

 Score = 88.4 bits (219), Expect = 5e-25
 Identities = 25/66 (37%), Positives = 35/66 (53%)

Query: 15 MLVPGTKWCGYGNGATGFTDLGSFSSTDLCCRRHDSCQYTIPGFSWRYKYFNMKPFTLSH 74
          ++ PGT WCG+GN ++G  +LG F  TD CCR HD C   +     ++   N    T   
Sbjct: 1  IIYPGTLWCGHGNKSSGPNELGRFKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLS 60

Query: 75 CTCDQR 80
          C CD +
Sbjct: 61 CDCDDK 66


>d1b63a2 d.122.1.2 (A:-2-216) DNA mismatch repair protein MutL
           {Escherichia coli [TaxId: 562]}
          Length = 218

 Score = 24.7 bits (53), Expect = 1.3
 Identities = 7/59 (11%), Positives = 13/59 (22%), Gaps = 3/59 (5%)

Query: 22  WCGYGNGATGFTDLGS-FSSTD--LCCRRHDSCQYTIPGFSWRYKYFNMKPFTLSHCTC 77
               G       D G      +  L   RH + +               +   L+  + 
Sbjct: 48  IERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISS 106


>d2g58a1 a.133.1.2 (A:1-133) Snake phospholipase A2 {Snake (Daboia
          russellii pulchella), different isoforms [TaxId:
          97228]}
          Length = 121

 Score = 23.0 bits (49), Expect = 5.2
 Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 11/64 (17%)

Query: 22 WCGYGNGATGFTDLGSFSSTDLCCRRHDSCQYTIPGF-----SWRYKYFNMKPFTLSHCT 76
          +CG+G   T          TD CC  HD C   +P        ++YK  N         +
Sbjct: 27 YCGWGGKGTPKDA------TDRCCFVHDCCYGNLPDCNPKSDRYKYKRVNGAIVCEKGTS 80

Query: 77 CDQR 80
          C+ R
Sbjct: 81 CENR 84


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.139    0.489 

Gapped
Lambda     K      H
   0.267   0.0588    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 326,862
Number of extensions: 12554
Number of successful extensions: 81
Number of sequences better than 10.0: 1
Number of HSP's gapped: 81
Number of HSP's successfully gapped: 24
Length of query: 80
Length of database: 2,407,596
Length adjustment: 46
Effective length of query: 34
Effective length of database: 1,776,016
Effective search space: 60384544
Effective search space used: 60384544
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.2 bits)