Query psy15609
Match_columns 567
No_of_seqs 294 out of 1736
Neff 7.7
Searched_HMMs 46136
Date Fri Aug 16 17:04:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15609.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15609hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK06170 amidase; Provisional 100.0 1.6E-97 4E-102 812.3 47.5 452 66-562 6-489 (490)
2 KOG1212|consensus 100.0 4.1E-98 9E-103 792.7 40.6 504 27-563 5-559 (560)
3 PRK07042 amidase; Provisional 100.0 3E-96 7E-101 796.7 47.7 442 69-565 4-461 (464)
4 PRK06169 putative amidase; Pro 100.0 3.4E-96 7E-101 796.7 47.0 442 68-563 3-463 (466)
5 PRK07487 amidase; Provisional 100.0 5.7E-96 1E-100 795.0 47.5 448 68-564 4-463 (469)
6 COG0154 GatA Asp-tRNAAsn/Glu-t 100.0 2.5E-96 5E-101 791.7 42.5 447 68-563 3-474 (475)
7 PRK07486 amidase; Provisional 100.0 1.2E-95 2E-100 796.0 45.4 446 64-559 4-474 (484)
8 PRK07488 indole acetimide hydr 100.0 4.1E-95 9E-100 789.4 44.5 448 68-561 7-471 (472)
9 TIGR02715 amido_AtzE amidohydr 100.0 6.2E-95 1.4E-99 783.9 45.4 426 73-553 1-447 (452)
10 PRK09201 amidase; Provisional 100.0 9.1E-95 2E-99 784.8 45.8 438 69-563 4-462 (465)
11 PRK07056 amidase; Provisional 100.0 9.8E-95 2.1E-99 782.3 45.2 430 73-557 7-453 (454)
12 PRK06102 hypothetical protein; 100.0 1.3E-94 2.9E-99 780.9 45.2 432 69-557 3-451 (452)
13 PRK08137 amidase; Provisional 100.0 6.5E-94 1.4E-98 784.7 45.8 452 68-560 2-487 (497)
14 PRK06061 amidase; Provisional 100.0 2.3E-93 5.1E-98 776.6 47.5 440 68-560 14-472 (483)
15 TIGR00132 gatA glutamyl-tRNA(G 100.0 6.4E-94 1.4E-98 778.6 41.1 435 77-553 1-460 (460)
16 PRK12470 amidase; Provisional 100.0 8.7E-93 1.9E-97 768.2 46.9 437 69-559 6-455 (462)
17 PRK00012 gatA aspartyl/glutamy 100.0 1.3E-93 2.7E-98 776.0 40.3 434 81-551 1-459 (459)
18 PRK07869 amidase; Provisional 100.0 5.6E-93 1.2E-97 772.4 45.3 438 67-560 10-466 (468)
19 PRK06529 amidase; Provisional 100.0 1.6E-92 3.5E-97 770.9 45.4 429 71-553 3-477 (482)
20 PRK08186 allophanate hydrolase 100.0 1E-90 2.2E-95 768.3 44.7 432 71-558 6-450 (600)
21 PRK05962 amidase; Validated 100.0 1.7E-90 3.8E-95 743.1 41.7 400 122-555 9-421 (424)
22 PRK06828 amidase; Provisional 100.0 8.8E-90 1.9E-94 746.1 45.8 439 71-563 12-489 (491)
23 PRK07235 amidase; Provisional 100.0 3.8E-90 8.2E-95 752.3 40.6 448 68-553 21-500 (502)
24 PRK11910 amidase; Provisional 100.0 5.1E-89 1.1E-93 742.6 46.7 435 67-563 160-614 (615)
25 PF01425 Amidase: Amidase; In 100.0 3.7E-91 8E-96 751.9 27.8 413 90-544 1-441 (441)
26 PRK06707 amidase; Provisional 100.0 9.1E-87 2E-91 726.4 46.5 432 68-562 67-535 (536)
27 PRK06565 amidase; Validated 100.0 1.5E-84 3.2E-89 703.0 41.1 461 68-563 3-562 (566)
28 TIGR02713 allophanate_hyd allo 100.0 1.3E-84 2.8E-89 712.9 40.9 399 129-558 2-413 (561)
29 PRK07139 amidase; Provisional 100.0 1.9E-82 4.1E-87 682.8 37.4 383 158-556 33-434 (439)
30 PRK08310 amidase; Provisional 100.0 4.1E-81 8.9E-86 664.8 36.8 362 157-553 21-393 (395)
31 PLN02722 indole-3-acetamide am 100.0 5.7E-79 1.2E-83 651.1 36.2 397 125-552 4-420 (422)
32 KOG1211|consensus 100.0 1.2E-72 2.6E-77 593.4 23.0 437 81-553 27-494 (506)
33 KOG1212|consensus 93.9 0.016 3.4E-07 63.6 -0.0 146 176-326 184-330 (560)
34 PF09889 DUF2116: Uncharacteri 39.2 84 0.0018 24.1 5.0 15 16-30 25-39 (59)
35 PRK09458 pspB phage shock prot 35.0 61 0.0013 26.1 3.8 56 33-89 6-62 (75)
36 PF06667 PspB: Phage shock pro 34.0 65 0.0014 26.0 3.9 27 32-58 5-31 (75)
37 PF06072 Herpes_US9: Alphaherp 27.8 2.2E+02 0.0047 21.9 5.5 23 30-52 35-57 (60)
38 PF11373 DUF3175: Protein of u 27.7 56 0.0012 26.7 2.5 66 3-81 19-84 (86)
39 PF07782 DC_STAMP: DC-STAMP-li 27.4 1.1E+02 0.0023 29.2 5.0 55 1-55 26-84 (191)
40 PF05240 APOBEC_C: APOBEC-like 25.8 17 0.00038 27.4 -0.6 40 198-238 7-46 (55)
41 PRK03202 6-phosphofructokinase 23.9 1.4E+02 0.003 31.2 5.3 57 118-187 86-142 (320)
42 PF00365 PFK: Phosphofructokin 22.2 1E+02 0.0022 31.5 3.9 71 118-204 85-155 (282)
43 cd00363 PFK Phosphofructokinas 21.8 1.9E+02 0.0041 30.4 5.9 62 118-186 85-146 (338)
44 PF14237 DUF4339: Domain of un 20.3 35 0.00076 24.3 0.1 21 72-92 14-34 (45)
45 PF07423 DUF1510: Protein of u 20.3 1.2E+02 0.0025 29.8 3.7 17 21-37 8-24 (217)
46 COG1049 AcnB Aconitase B [Ener 20.1 40 0.00086 37.6 0.5 27 73-99 128-154 (852)
No 1
>PRK06170 amidase; Provisional
Probab=100.00 E-value=1.6e-97 Score=812.26 Aligned_cols=452 Identities=29% Similarity=0.434 Sum_probs=378.2
Q ss_pred hhhhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHH
Q psy15609 66 ENELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKL 145 (567)
Q Consensus 66 ~~~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~ 145 (567)
.+++..+|+.+|+++|++|++|++||+++||+|| +++|+.+|||++.++++|+++|++
T Consensus 6 ~~~~~~~s~~~l~~~~~~g~~t~~ev~~~~l~ri----------------------~~~~~~lna~~~~~~e~al~~A~~ 63 (490)
T PRK06170 6 ADEWSFLPATELAAALAAGEVSSVELTDLAIARI----------------------ERHDGKINAIVVRDFDRARAAARA 63 (490)
T ss_pred cchhhhcCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCCCcCEEEECCHHHHHHHHHH
Confidence 3567888999999999999999999999999999 999999999999999999999999
Q ss_pred hhHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCC
Q psy15609 146 LDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETR 225 (567)
Q Consensus 146 ~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~ 225 (567)
+|+++++| ..+|||||||+|||+|+++|++||+||..++++++.+||++|++||+||||++||||||||+++.++.
T Consensus 64 ~d~~~~~g----~~gpL~GvPv~VKD~~~v~G~~tt~Gs~~~~~~~~~~da~vV~rLr~aGAii~GKTn~~E~~~~~~~~ 139 (490)
T PRK06170 64 ADAARARG----ERGPLLGIPVTVKESFNVAGLPTTWGFPDLRDYVPAEDAVAVARLKAAGAVILGKTNVPLGLQDWQSY 139 (490)
T ss_pred HHHHHhcC----CCCCcCCceEEEecccccCCcccCCCChhhcCCCCCccHHHHHHHHHCCCEEEEecCChhhccCCCcc
Confidence 99998876 35999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCC---CCC
Q psy15609 226 NMVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSG---KEA 302 (567)
Q Consensus 226 n~~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~---~~~ 302 (567)
|.+||+|+||||+.|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||+.|++|.+. ...
T Consensus 140 n~~~G~t~NP~~~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~Grv~~~G~~~~~~~~~~~~ 219 (490)
T PRK06170 140 NEIYGTTNNPWDLARTPGGSSGGSAAALAAGFGALSIGSDIGGSLRVPAHYCGVYAHKPTLGLVPLRGHIPPPAPALPGQ 219 (490)
T ss_pred CCCCCCCCCCCCCCCCCCCChHHHHHHHHcCCCceeeecCCCCccccChHHhCceeecCCCCcCcCCCcCCccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998210 112
Q ss_pred CCcceeccccCCHhhHHHHHHHhcCCcccCcC---cccc----cCCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Q psy15609 303 RTMVSAGPIVKHAEDILPFIKCLVIPEKLHQL---KLDR----THDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRA 375 (567)
Q Consensus 303 ~~~~~~GpmaR~v~Dl~~ll~v~ag~~p~~~~---~l~~----~~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~ 375 (567)
.++|++|||||+|+|+++++++|+|+++.++. .... ..+++++||||+.+++ ...++++++++++++++.
T Consensus 220 ~~~d~~Gp~arsv~D~a~~l~~l~g~d~~d~~~~~~~~~~~~~~~~~~~lrig~~~~~~---~~~~~~~v~~a~~~a~~~ 296 (490)
T PRK06170 220 ADLAVAGPMARSARDLALLLDVMAGPDPLDGGVAYRLALPPARHGRLKDFRVLVLDEHP---LLPTDAAVRAAIERLAAA 296 (490)
T ss_pred cccccccCccCCHHHHHHHHHHHhCCCccccccccccCCCcccccccCCCEEEEECCcC---CCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999998755521 1111 1246789999997643 457899999999999999
Q ss_pred hhhcCCcEEEEecC--ccchHHHHHHHHHHHhccCc-chhHHhhhcccccchHHHHHHHHhCCC---CCchHHHHHHHH-
Q psy15609 376 LDEITEVSAEKLEN--IKQFKKSYALWRYWMTKEPG-NFARDLVNQEGEASWWRETIKIFLGMS---DHTLPAIMKLID- 448 (567)
Q Consensus 376 L~~~lG~~V~ev~~--lp~~~~~~~~~~~~~~~e~~-~~~~~l~~~~~~~~~~~el~k~~~~~s---~~~~~~~~~l~~- 448 (567)
|+++ |++|+++ + ++.+.+....+...+..+.. .+.. +......... ....+.+...+.
T Consensus 297 L~~~-G~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (490)
T PRK06170 297 LADA-GARVVRH-SPLLPDLAESARLYMRLLFAASAARFPP-------------DAYADAQARAAGLSADDRSLAAERLR 361 (490)
T ss_pred HHHC-CCEEEEc-CCCCCchHHHHHHHHHHHHHHHhhccch-------------hHHHHhhhccccccchhHHHHHHHhc
Confidence 9996 9999988 6 45555555544333322110 0100 0001111000 011122222222
Q ss_pred -hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCcccc----------C----CCCcchhHhhHhhCC
Q psy15609 449 -MHLPLPKDDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFF----------R----PYNFAYWAIFNVLGF 513 (567)
Q Consensus 449 -~~~s~~~~~~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~----------~----~~~~~yT~l~NllGl 513 (567)
..++..+|.++++.|+.++++|.++|+++|+||+||+|.+||.++.... . ...+.||.+||++|+
T Consensus 362 g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~ 441 (490)
T PRK06170 362 GAVLSHRDWLFADAAREELRAAWRRFFAEFDVVLCPVTPTPAFPHDHAPDPLERRIDIDGVSYPYWDQLVWAGLATLPGL 441 (490)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCCCCccccccccccccCCcccchhhhhhhcceecccCC
Confidence 5678899999999999999999999999999999999999999864210 0 011358899999999
Q ss_pred CeEEEcCCCCCCCCceEEEEEcCCCChHHHHHHHHHHHHhhcCCCCCCC
Q psy15609 514 PVVNVPVGLSKDGLPLGVQIVATTNNDKLCIDVANYLEKQSVIGWKPPF 562 (567)
Q Consensus 514 PaisVP~G~~~~GLPvGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~p~ 562 (567)
|+++||+|++.+|||+||||||++|+|++||++|++||+. +++|++|+
T Consensus 442 PaisvP~g~~~~GlPvGlQlig~~~~D~~LL~~a~~lE~~-~~~~~~~~ 489 (490)
T PRK06170 442 PATAIPIGLSATGLPVGVQIVGPALEDRTPLRLAELLEEE-FGGFRPPP 489 (490)
T ss_pred CeEEEECCcCCCCCceeEEEecCCCCHHHHHHHHHHHHHh-cCCCCCCC
Confidence 9999999998899999999999999999999999999999 99997554
No 2
>KOG1212|consensus
Probab=100.00 E-value=4.1e-98 Score=792.67 Aligned_cols=504 Identities=33% Similarity=0.500 Sum_probs=424.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccCC----CCcchhhhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhcc
Q psy15609 27 VACNLLTMFLTFVRSLVDWCIDFVFSFIYEE-QKFA----LPPVENELLLQSATTVATKIKNKAISCEEVVKIFIHRIDC 101 (567)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~p~~~~~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~ 101 (567)
..|.++.|....+..+.+..+.+.+.+..+. +... +.+..+.|+.+|+++|+++|++|++||+||++||++||
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~il~~~~~~L~~~L~~~e~~~~~vl~Ay~~Ra-- 82 (560)
T KOG1212|consen 5 FVMKFLLRQLALIEDAENRLIKFRLLLSLRVKKAKSTAPKLDTTRNAILKLDATELAQALQSGELTSVEVLCAYCHRA-- 82 (560)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhcccCcccchHHHHHhhcCHHHHHHHHHhCcCcHHHHHHHHHHHH--
Confidence 3788888888888888888877766553222 1111 33345789999999999999999999999999999999
Q ss_pred CCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhhHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCC
Q psy15609 102 KVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFS 181 (567)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt 181 (567)
.++|+.+|||++..+|+|+.+|++.|..++.+ ..++||+||||+|||+|.+||+.+|
T Consensus 83 --------------------~~vn~~lNcV~~~i~e~~~~~a~~~d~~~~~~---~~k~PL~GvP~SvKe~~~vkg~d~T 139 (560)
T KOG1212|consen 83 --------------------IEVNQKLNCVVEFIFEAALQAAALDDEYTAPL---YEKPPLYGVPFSVKESISVKGYDST 139 (560)
T ss_pred --------------------HHhccCcceeeeehhhHHHHHhhchhhhhchh---cccCCceecceehhhheeecCcccc
Confidence 99999999999999999999999999886543 3668999999999999999999999
Q ss_pred CCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCcc
Q psy15609 182 IGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLG 261 (567)
Q Consensus 182 ~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~ 261 (567)
.|...+++.++++|+.+|+.||++|||++.+||+||.|||+++.|++||+|.||||.+|+||||||||||++|||+++||
T Consensus 140 ~G~~~~~~~~a~~ds~~V~~lk~~GaIpf~~TnvPq~~ls~~tsn~v~G~T~NP~d~~rt~GGSSGGEaALigaggS~lG 219 (560)
T KOG1212|consen 140 AGLLARTNQPATTDSVIVEFLKKLGAIPFVLTNVPQSLLSYETSNPVYGTTKNPYDLSRTPGGSSGGEAALLGAGGSLLG 219 (560)
T ss_pred chhhhccCCCCccchHHHHHHHHcCCCceeecCCchhhhhhhhcCCCCCCCCChhhccCCCCCCchHHHHHHhCCcceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcceeccccCCHhhHHHHHHHhcCCcccCcCcccccC-
Q psy15609 262 LGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSAGPIVKHAEDILPFIKCLVIPEKLHQLKLDRTH- 340 (567)
Q Consensus 262 lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~~- 340 (567)
||||+||||||||+|||+||||||.+++|..|+.+...+.+..+.++|||+|+++|+.++|++|.|.. ......+.+.
T Consensus 220 iGsDigGSiRiPa~f~Gl~GlKPT~~r~~~~G~~~~~~g~~~~~~~~GPm~r~v~dl~~~L~~~i~~~-~~~~~~p~~~p 298 (560)
T KOG1212|consen 220 IGSDIGGSIRIPAAFCGLFGLKPTPGRVSVKGHHPSVPGRETIMLVIGPMTRDVEDLVLLLRLMIGDS-GPKLLDPYPVP 298 (560)
T ss_pred cccccCCceeechhhccccccCCCCCeeeecCcCCCCCcccccccccCcccccHHHHHHHHHHhcCCc-cccccCCCCCC
Confidence 99999999999999999999999999999999999876777889999999999999999999999965 2211111111
Q ss_pred ---------CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCccchHHHHHHHHHHHhccCcch
Q psy15609 341 ---------DLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSAEKLENIKQFKKSYALWRYWMTKEPGNF 411 (567)
Q Consensus 341 ---------~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~V~ev~~lp~~~~~~~~~~~~~~~e~~~~ 411 (567)
.-++++|||..++| +.++.|.+++|+.++++.|++. |++++++ ++|++++..++|.. ...+...+
T Consensus 299 ~~~~~~~y~~~~~~~ig~~~~dg---~~~~~pa~~RAv~~~~~~l~~~-g~~~~~f-~~~~~~~~~~~~~~-~~~~~~~~ 372 (560)
T KOG1212|consen 299 VKFMEVFYKSSDKLVIGYYVDDG---FFDPSPAMQRAVQETIDLLEKA-GHEVVPF-DLPDLKHVADMFFR-VMPDDGDY 372 (560)
T ss_pred chhhhhhhhccCCccceEEecCC---CCCcCHHHHHHHHHHHHHHHhc-CcceeEe-cCCcchHHHHHHHH-Hcccccch
Confidence 34578999988776 5678999999999999999996 9999999 99999999999977 33223332
Q ss_pred h-HHhh-hcc----cccchHHHHHHHHhCCCCCchHHHHH-HHH---hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Q psy15609 412 A-RDLV-NQE----GEASWWRETIKIFLGMSDHTLPAIMK-LID---MHLPLPKDDWAQEQTDKLRKKLTDVLADDGVLI 481 (567)
Q Consensus 412 ~-~~l~-~~~----~~~~~~~el~k~~~~~s~~~~~~~~~-l~~---~~~s~~~~~~a~~~r~~l~~~~~~ll~~~dvLL 481 (567)
. ..+. +.. .....++++.+++++.+.++...+.. ++. ..++...+.++..+..+++......++++||||
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~e~yrlk~~~~~~~~~~dVll 452 (560)
T KOG1212|consen 373 ISEMYLLDIGDPTLNLFVKFVELPKVFLGRSLHSYIVLPFCIMDAKNSDTAELRQNYEDIESYRLKFILYWLLGKDDVLI 452 (560)
T ss_pred hhHHhhcccCccccchheeeeeccHHHHhhhhhhhHhHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 2 2221 111 12234667776777766665443333 444 334444555555555556666667778999999
Q ss_pred ecCCCCCCCCCCccccCCCCcchhHhhHhhCCC-------------------------eEEEcCC-CCCCCCceEEEEEc
Q psy15609 482 FPSCPCPATYHYTTFFRPYNFAYWAIFNVLGFP-------------------------VVNVPVG-LSKDGLPLGVQIVA 535 (567)
Q Consensus 482 ~Pt~p~~Ap~~~~~~~~~~~~~yT~l~NllGlP-------------------------aisVP~G-~~~~GLPvGvQvVg 535 (567)
||++|+|||+|+.+...+.++.||++||+||+| +..+|.| .+..|||+||||||
T Consensus 453 ~Ps~~~pA~~h~~P~~~~~~~~Yt~LfN~Ld~Pag~vpvt~v~~~d~~~~~~~~~D~~~~~~~~g~~~s~GlPigVQVVa 532 (560)
T KOG1212|consen 453 CPSFPTPAPPHNYPLLLVNGFSYTGLFNVLDFPAGVVPVTTVTQKDEKEEEYPMNDKWATKVPKGSLDSRGLPIGVQVVA 532 (560)
T ss_pred eCCCCCCCCcCCCchhhccchhHHHHHHhccCCcccccccccchhhhcccccccccHHHHhCcccccCCCCCceeEEEec
Confidence 999999999999999999999999999999999 5555556 67889999999999
Q ss_pred CCCChHHHHHHHHHHHHhhcCCCCCCCC
Q psy15609 536 TTNNDKLCIDVANYLEKQSVIGWKPPFN 563 (567)
Q Consensus 536 ~~~~D~~lLavA~~lE~~~~~gw~~p~p 563 (567)
+||+|++||++|+++|+. |+||++|.|
T Consensus 533 ~p~~delcL~va~~lE~~-~gg~~~p~~ 559 (560)
T KOG1212|consen 533 NPNQDELCLAVARELERK-FGGWVRPGP 559 (560)
T ss_pred CCCchHHHHHHHHHHHHH-hCCccCCCC
Confidence 999999999999999999 999999987
No 3
>PRK07042 amidase; Provisional
Probab=100.00 E-value=3e-96 Score=796.66 Aligned_cols=442 Identities=24% Similarity=0.319 Sum_probs=371.2
Q ss_pred hhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhhH
Q psy15609 69 LLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDK 148 (567)
Q Consensus 69 i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~ 148 (567)
+..+|+.+|+++|++|++|++||+++|++|| +++|+.+|||++.++++|+++|+++|+
T Consensus 4 ~~~~~~~~l~~~~~~g~~s~~el~~~~l~ri----------------------~~~~~~lna~~~~~~d~al~~A~~~d~ 61 (464)
T PRK07042 4 LHDLSAVELLAGYRARSLSPVEVTEAVLAHI----------------------ARWEPHLNALYAFDPEAARAAARASTA 61 (464)
T ss_pred hhhCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHHCCCccEEEEcCHHHHHHHHHHHHH
Confidence 5567999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCC
Q psy15609 149 QIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMV 228 (567)
Q Consensus 149 ~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~ 228 (567)
++++| ...+|||||||+|||+|+++|++||+||..++++++++||++|++||+||||++||||||||+++.+|.|.+
T Consensus 62 ~~~~g---~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~~Lr~aGAiilGKTn~~Efa~~~~~~n~~ 138 (464)
T PRK07042 62 RWAKG---EPLGPLDGVPVTIKENIATRGVPVPLGTAATDLPPAAADAPPAARLREAGAVILAKTTMPDYGMLSSGLSSF 138 (464)
T ss_pred HHHcC---CCCCCcCCCEEEEEcccccCCcccCCCChhhcCCCCCcchHHHHHHHHCCCEEEEecCchHhhcCCCCCCCC
Confidence 99887 367999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCccee
Q psy15609 229 FGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSA 308 (567)
Q Consensus 229 ~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~ 308 (567)
||+|+||||++|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||..|.+ +.|++
T Consensus 139 ~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~Grv~~~g~~--------~~d~~ 210 (464)
T PRK07042 139 HGLTRNPWDLDQNPGGSSAGAGAAAAAGYGPLHLGTDIGGSVRLPAGWCGIVGLKPSLGRIPIDPPY--------TGRCA 210 (464)
T ss_pred CCCcCCCCCCCCCCCCChHHHHHHHHcCCCceeeecCCCCccccchHhhCceeecCCCCccCCCCCc--------ccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999998742 34799
Q ss_pred ccccCCHhhHHHHHHHhcCCcccCcCccccc--------CCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcC
Q psy15609 309 GPIVKHAEDILPFIKCLVIPEKLHQLKLDRT--------HDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEIT 380 (567)
Q Consensus 309 GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~--------~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~l 380 (567)
|||||+|+|+++++++|+|+++.|+.....+ .+++++||||+.+++ ....++++++++++++++.|+++
T Consensus 211 Gp~arsv~D~a~~l~vl~g~d~~d~~~~~~~~~~~~~~~~~~~~lrigv~~~~~--~~~~~~~~v~~a~~~a~~~L~~~- 287 (464)
T PRK07042 211 GPMTRTVDDAALLMSVLSRPDARDGTSLPPQDIDWSDLDIDVRGLRIGLMLDAG--CGLAVDPEVRAAVEAAARRFEAA- 287 (464)
T ss_pred CCccCCHHHHHHHHHHhcCCCCCCccccCCCCcChhhhccCcCCCEEEEECccc--CCCCCCHHHHHHHHHHHHHHHHC-
Confidence 9999999999999999999886665433211 235789999986543 22468999999999999999995
Q ss_pred CcEEEEecCccchHHHHHHHHHHHhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHHHHH--hCCChHHHHH
Q psy15609 381 EVSAEKLENIKQFKKSYALWRYWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMKLID--MHLPLPKDDW 458 (567)
Q Consensus 381 G~~V~ev~~lp~~~~~~~~~~~~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~l~~--~~~s~~~~~~ 458 (567)
|++|+++ +++......+.+...+..+ . +.++..+.....+...+.+...+. ..++..+|.+
T Consensus 288 G~~v~~~-~~~~~~~~~~~~~~~~~~~---~-------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 350 (464)
T PRK07042 288 GAIVEPV-PPFLTRAMLDGLDRFWRAR---L-------------WSDLAALPPERRAKVLPYIRRWAEGGADLSGVEAVR 350 (464)
T ss_pred CCEEEEe-CCchhHHHHHHHHHHHHHH---H-------------HHHHHHHhhhhhhhcCHHHHHHHHhccCCCHHHHHH
Confidence 9999999 7554332322221111110 0 000001100011111233333223 5778899999
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCccc------cCCCCcchhHhhHhhCCCeEEEcCCCCCCCCceEEE
Q psy15609 459 AQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTF------FRPYNFAYWAIFNVLGFPVVNVPVGLSKDGLPLGVQ 532 (567)
Q Consensus 459 a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~------~~~~~~~yT~l~NllGlPaisVP~G~~~~GLPvGvQ 532 (567)
+...++++++.|.++|+++|+||+||+|.+||.++... .....+.||.+||++|+|+++||+|++.+|||+|||
T Consensus 351 a~~~~~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~~GlPvGlQ 430 (464)
T PRK07042 351 GFNQTFAMRAAAARLFAEFDYVLSPVAPVPAFPAEWASPTNDPARPFEHIAFTVPWNMSEQPAASINCGFTRDGLPIGLQ 430 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEcCCCCCCCCCcccccccccchhhhcccccccceeccCCCeEEeecCcCCCCCCeEEE
Confidence 99999999999999999999999999999999886311 111224589999999999999999998899999999
Q ss_pred EEcCCCChHHHHHHHHHHHHhhcCCCCCCCCCC
Q psy15609 533 IVATTNNDKLCIDVANYLEKQSVIGWKPPFNLH 565 (567)
Q Consensus 533 vVg~~~~D~~lLavA~~lE~~~~~gw~~p~p~~ 565 (567)
|+|++++|+.||++|++||+. + +|+.+.|.-
T Consensus 431 lvg~~~~D~~lL~~a~~le~~-~-~~~~~~~~~ 461 (464)
T PRK07042 431 IVGPRFDDLGVLRLAKAFEGW-R-GPQRPWPEP 461 (464)
T ss_pred EecCCCcHHHHHHHHHHHHHh-c-cccccCCCc
Confidence 999999999999999999999 5 788776643
No 4
>PRK06169 putative amidase; Provisional
Probab=100.00 E-value=3.4e-96 Score=796.70 Aligned_cols=442 Identities=24% Similarity=0.346 Sum_probs=373.8
Q ss_pred hhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhh
Q psy15609 68 ELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLD 147 (567)
Q Consensus 68 ~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D 147 (567)
++..+|+.+|+++|++|++|++||+++|++|| +++|+.+|||++.++++|+++|+++|
T Consensus 3 ~~~~~~~~~l~~~l~~g~~t~~ev~~~~l~ri----------------------~~~~~~lna~~~~~~~~al~~A~~~d 60 (466)
T PRK06169 3 DLADLTAVELLAAYRRGELSPVEATQAVLDRI----------------------DRRDPAVNAFCLVDAEGALAAARASE 60 (466)
T ss_pred chhhCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCCCCCEEEEeCHHHHHHHHHHHH
Confidence 46678999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCC-CCcHHHHHHHHHCCCeEEEEcCccccccCCCCCC
Q psy15609 148 KQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKG-TEDAYIVERLKSAGAILLGVTNVPELCLWSETRN 226 (567)
Q Consensus 148 ~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a-~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n 226 (567)
+++++|. ..+|||||||+|||+|+++|++||+||..+++..+ .+||++|++||+||||++||||||||+++.++.|
T Consensus 61 ~~~~~g~---~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~p~~~da~vV~~Lr~aGAii~GKTn~~E~a~~~~~~n 137 (466)
T PRK06169 61 ERWRRGE---PCGLLDGVPVSIKDIFLTRGWPTLRGSRAIDADGPWDVDAPAVARLREAGAVLLGKTTTPEFGWKGVTDS 137 (466)
T ss_pred HHHhcCC---CCCCcCCceEEEecccccCCcccCccChhhccCCCCCCCHHHHHHHHHCCCEEEEecCchHhhcCCCCCC
Confidence 9998873 67999999999999999999999999999996655 7999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcc
Q psy15609 227 MVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMV 306 (567)
Q Consensus 227 ~~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~ 306 (567)
.+||+|+||||++|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|++|+.|+.|.+ ++|
T Consensus 138 ~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGv~G~KPT~G~vs~~g~~~~~-----~~d 212 (466)
T PRK06169 138 PLYGITRNPWDTRLTAGGSSGGAAAAVALGMGPLSVGTDGGGSVRIPASFCGTFGFKPTFGRVPLYPASPFG-----TLA 212 (466)
T ss_pred CCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceeeecCCCCcchhchHhhCceeecCCCCccCCCCCCCCc-----ccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999987743 799
Q ss_pred eeccccCCHhhHHHHHHHhcCCcccCcCcccc---------cCCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhh
Q psy15609 307 SAGPIVKHAEDILPFIKCLVIPEKLHQLKLDR---------THDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALD 377 (567)
Q Consensus 307 ~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~---------~~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~ 377 (567)
++|||||+++|+++++++|+|+++.|+..... ..+++++||||+++++ ...++++++++++++++.|+
T Consensus 213 ~~Gp~arsv~D~~~~~~~l~g~~~~d~~~~~~~~~~~~~~~~~~~~~lrig~~~~~~---~~~~~~~v~~a~~~a~~~L~ 289 (466)
T PRK06169 213 HVGPMTRTVADAALLLDVIARPDARDWSALPPPTTSFLDALDRDVRGLRIAYSPTLG---YVDVDPEVAALVAQAVQRLA 289 (466)
T ss_pred ccCCeeCCHHHHHHHHHHhcCCCCCCCcccCCCCcchhhhhccCCCCCEEEEECCcC---CCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999987655543321 1246889999987643 45689999999999999999
Q ss_pred hcCCcEEEEecCccchHHHHHHHHHHHhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHHHHH--hCCChHH
Q psy15609 378 EITEVSAEKLENIKQFKKSYALWRYWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMKLID--MHLPLPK 455 (567)
Q Consensus 378 ~~lG~~V~ev~~lp~~~~~~~~~~~~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~l~~--~~~s~~~ 455 (567)
++ |++|+++ +++ +.+....+...+.. +....+ +.+. ....+...+.+...++ ..++..+
T Consensus 290 ~~-G~~v~~~-~~~-~~~~~~~~~~~~~~---~~~~~~-----------~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~ 350 (466)
T PRK06169 290 AL-GARVEEV-DPG-FSDPVEAFHVLWFA---GAARLL-----------RALP--PGQRALLDPGLRRIAERGATYSASD 350 (466)
T ss_pred Hc-CCEEEEe-CCC-cchHHHHHHHHHHH---HHHHHH-----------HHhh--hcchhhcCHHHHHHHHhcccCCHHH
Confidence 95 9999999 755 33333333222221 011111 0000 0001111133333333 6788899
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCccc--cCC-----CCcchhHhhHhhCCCeEEEcCCCCCCCCc
Q psy15609 456 DDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTF--FRP-----YNFAYWAIFNVLGFPVVNVPVGLSKDGLP 528 (567)
Q Consensus 456 ~~~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~--~~~-----~~~~yT~l~NllGlPaisVP~G~~~~GLP 528 (567)
|.++++.|+.++++|.++|+++|+||+||+|.+||.++... ... ....||.+||++|+|+++||+|++.+|||
T Consensus 351 ~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~~GlP 430 (466)
T PRK06169 351 YLDATAVRAALGARMGAFHERYDLLLTPTLPIPAFEAGHDVPPGSGLTDWTQWTPFTYPFNLTQQPAASVPCGFTAAGLP 430 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCCCCccCCCccchhhhhhhhcccccccccCCCeEEEecCcCCCCCc
Confidence 99999999999999999999999999999999999886521 110 11358999999999999999999889999
Q ss_pred eEEEEEcCCCChHHHHHHHHHHHHhhcCCCCCCCC
Q psy15609 529 LGVQIVATTNNDKLCIDVANYLEKQSVIGWKPPFN 563 (567)
Q Consensus 529 vGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~p~p 563 (567)
+||||||++++|+.||++|++||+. .+|..+.|
T Consensus 431 vGlQlvg~~~~d~~lL~~a~~le~~--~~~~~~~p 463 (466)
T PRK06169 431 VGLQIVGPRHSDDLVLRVARAYEQA--LPWPHGAP 463 (466)
T ss_pred eEEEEecCCCcHHHHHHHHHHHHhh--cCcccCCC
Confidence 9999999999999999999999999 57886655
No 5
>PRK07487 amidase; Provisional
Probab=100.00 E-value=5.7e-96 Score=795.01 Aligned_cols=448 Identities=27% Similarity=0.383 Sum_probs=374.0
Q ss_pred hhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhh
Q psy15609 68 ELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLD 147 (567)
Q Consensus 68 ~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D 147 (567)
++..+|+.+|+++|++|++|++||+++|++|| +++|+.+|||++.++|+|+++|+++|
T Consensus 4 ~~~~~~~~~l~~~l~~g~~t~~ev~~~~l~ri----------------------~~~~~~lna~~~~~~e~al~~A~~~d 61 (469)
T PRK07487 4 ELWRLSAAELAAAVRSRDVSAREAAEAALARL----------------------DAVNPAINAVVDHRPEEALAQADAVD 61 (469)
T ss_pred hhhhCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHHCCCccEEEEeCHHHHHHHHHHhH
Confidence 36678999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCC
Q psy15609 148 KQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNM 227 (567)
Q Consensus 148 ~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~ 227 (567)
+++++|+ ..+|||||||+|||+|+++|++||+||..++++++.+||++|++||+||||++||||||||++++++.|.
T Consensus 62 ~~~~~g~---~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~da~vV~rLr~aGAii~GKTn~~Efa~~~~~~n~ 138 (469)
T PRK07487 62 AARARGD---DPGPLAGVPVTVKVNVDQAGFATTNGVRLQKDLIAPADSPVVDNLRKAGAVIIGRTNTPAFSYRWFTDNP 138 (469)
T ss_pred HHHhcCC---CCCCcCCCEEEEecccccCCCccCcchHHhcCCCCCCchHHHHHHHHCCCEEEEecChhhhhcCCCCCCC
Confidence 9988873 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCC-CCCCCcc
Q psy15609 228 VFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSG-KEARTMV 306 (567)
Q Consensus 228 ~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~-~~~~~~~ 306 (567)
+||+|+||||+.|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||..|+++... ....++|
T Consensus 139 ~~G~t~NP~d~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~is~~g~~~~~~~l~~~~~~ 218 (469)
T PRK07487 139 LHGRTLNPWDPSLTPGGSSGGAAAAVAAGIGAIAHGTDIGGSIRYPAYACGVHGLRPTLGRVPAYNASSPERPIGAQLMS 218 (469)
T ss_pred CCCCCCCCCCCCCCCCcchHHHHHHHHcCCCceeeecCCCCccccchhhcCceeecCCCCccCCCCCCcccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999874221 1124789
Q ss_pred eeccccCCHhhHHHHHHHhcCCcccCcCccccc--CCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcEE
Q psy15609 307 SAGPIVKHAEDILPFIKCLVIPEKLHQLKLDRT--HDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSA 384 (567)
Q Consensus 307 ~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~--~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~V 384 (567)
++|||||+|+|+++++++|+|+++.|+.....+ .+++++||||..+++ ..+++++++++++++++.|++. |++|
T Consensus 219 ~~Gplarsv~D~a~~~~~l~g~d~~d~~~~~~~~~~~~~~lrig~~~~~~---~~~~~~~v~~a~~~a~~~L~~~-G~~v 294 (469)
T PRK07487 219 VQGPLARTVADLRLALAAMAAPDPRDPWWVPAPLEGPPRPKRVALCVRPD---GLDVDPEVEAALRDAARRLEDA-GWTV 294 (469)
T ss_pred ccCCeeCCHHHHHHHHHHHhCCCCCCCccCCCCccCCCCCcEEEEECCCC---CCCCCHHHHHHHHHHHHHHHHC-CCEE
Confidence 999999999999999999999886665433222 246789999987643 3568999999999999999995 9999
Q ss_pred EEecCccchHHHHHHHHHHHhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHHHHH--hCCChHHHHHHHHH
Q psy15609 385 EKLENIKQFKKSYALWRYWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMKLID--MHLPLPKDDWAQEQ 462 (567)
Q Consensus 385 ~ev~~lp~~~~~~~~~~~~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~l~~--~~~s~~~~~~a~~~ 462 (567)
+++.++|.+.+.+..|...+..|. ... + .+.+.. .+ .+...+.+...++ ..++..+|.++++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~e~--~~~-~----------~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 359 (469)
T PRK07487 295 EEVDDTPPLREAAELQERLWLGDG--YEA-L----------LAAAEA-EG-DPGALAALRGQRAKARPLDLAGYMNALAR 359 (469)
T ss_pred EecCCCCchHHHHHHHHHHHHHHH--HHH-H----------HHHHHh-hc-hhhhhHHHHHHHHhccCCCHHHHHHHHHH
Confidence 885146766666665544433211 100 0 011100 00 0111111111223 56789999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEecCCCCCCCCCCccccC--CC-----CcchhHhhHhhCCCeEEEcCCCCCCCCceEEEEEc
Q psy15609 463 TDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFFR--PY-----NFAYWAIFNVLGFPVVNVPVGLSKDGLPLGVQIVA 535 (567)
Q Consensus 463 r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~~--~~-----~~~yT~l~NllGlPaisVP~G~~~~GLPvGvQvVg 535 (567)
|++++++|.++|+++|+||+||+|++||+++..... .+ ...+|.+||++|+|+++||+|++ +|||+||||||
T Consensus 360 r~~~~~~~~~~~~~~D~ll~Pt~p~~a~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~-~GlPvGlQlvg 438 (469)
T PRK07487 360 RATLTRQWQLFFEDYPLLLMPVSAELPFPDDLDRQGAEGFRRVWEAQLPQIALPFMGLPGLSVPTGLV-GGVPVGVQLVA 438 (469)
T ss_pred HHHHHHHHHHHHhcCCEEEcCCCCCCCCCCCCcCCchhhhhHHHHhhcccccccccCCCeEEEECccC-CCcceeEEEeC
Confidence 999999999999999999999999999988642111 11 11246789999999999999995 79999999999
Q ss_pred CCCChHHHHHHHHHHHHhhcCCCCCCCCC
Q psy15609 536 TTNNDKLCIDVANYLEKQSVIGWKPPFNL 564 (567)
Q Consensus 536 ~~~~D~~lLavA~~lE~~~~~gw~~p~p~ 564 (567)
++++|+.||++|++||++ ++ +|.|.
T Consensus 439 ~~~~D~~lL~~a~~lE~~-~~---~~~~~ 463 (469)
T PRK07487 439 GRFREDLCLAAGEAIEAR-GG---PPTPI 463 (469)
T ss_pred CCCCHHHHHHHHHHHHHh-hC---CCCcc
Confidence 999999999999999999 54 55554
No 6
>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.5e-96 Score=791.70 Aligned_cols=447 Identities=28% Similarity=0.412 Sum_probs=378.5
Q ss_pred hhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHH--HHHH
Q psy15609 68 ELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALE--EAKL 145 (567)
Q Consensus 68 ~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~--~A~~ 145 (567)
.+...++.+|+++++++++|++|++++||+|| ++.|+.+||++....+.|+. +|++
T Consensus 3 ~~~~~~~~~l~~~~~~~~~s~~e~~~~~l~ri----------------------~~~~~~~na~~~~~~e~a~~~~~A~~ 60 (475)
T COG0154 3 ALTELTAAELAALLRAKELSAVELVEAYLARI----------------------EALNPDLNAFVAVDPEAALALAEAAA 60 (475)
T ss_pred chhhhhHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCCCCCEEEEeChhhcchHHHHHH
Confidence 35667999999999999999999999999999 99999999999999998866 9999
Q ss_pred hhHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCC
Q psy15609 146 LDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETR 225 (567)
Q Consensus 146 ~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~ 225 (567)
+|+++++| ...+||+||||+|||||+++|++||+||..++++++++||++|++||+||||++||||||||+|+..+.
T Consensus 61 ~d~~~~~g---~~~gpL~GvPiavKDn~~~~G~~Tt~gS~~l~~~~p~~DA~vV~rL~~aGaviiGKTNm~Efa~g~~~~ 137 (475)
T COG0154 61 ADARLAAG---EPLGPLAGVPIAVKDNIDTAGLPTTAGSKALEDYVPPYDATVVERLRAAGAVILGKTNMDEFAMGSSTE 137 (475)
T ss_pred HHHHHhcC---CCCCCcCCceEEEeeccccCCCccCccChhhccCCCCcCcHHHHHHHHCCCEEEeecCCchhhcCCCCC
Confidence 99999888 367999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCc
Q psy15609 226 NMVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTM 305 (567)
Q Consensus 226 n~~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~ 305 (567)
|++||.|+||||++|+||||||||||+||+|.+++++|||||||||+||+||||||||||+|+||+.|++|.+ .++
T Consensus 138 ~s~~G~t~NP~~~~~~pGGSSgGSAaAVAag~~~~alGSDtGGSIR~PAa~cGvvGlKPT~Grvsr~g~~~~a----~sl 213 (475)
T COG0154 138 NSAFGPTRNPWNLERVPGGSSGGSAAAVAAGLVPLALGSDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPLA----SSL 213 (475)
T ss_pred CCCCCCCCCCCCCCCCCCcCchHHHHHHHhCCcchhcccCCCCchhhhhhhhCceeeCCCCCccCCCCCcccc----CCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 789
Q ss_pred ceeccccCCHhhHHHHHHHhcCCcccCc-Ccc----c---ccCCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhh
Q psy15609 306 VSAGPIVKHAEDILPFIKCLVIPEKLHQ-LKL----D---RTHDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALD 377 (567)
Q Consensus 306 ~~~GpmaR~v~Dl~~ll~v~ag~~p~~~-~~l----~---~~~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~ 377 (567)
|++|||||+|+|+++++++|+|+|+.|. ... . ...+++++|||++.+.+ ...+.++++.++++++++.|+
T Consensus 214 d~~GplartV~D~a~l~~v~~g~D~~d~~~~~~~~~~~~~~~~~~~~lrigv~~~~~--~~~~~~~~v~~~~~~a~~~l~ 291 (475)
T COG0154 214 DQIGPLARTVRDAALLLDVIAGPDPRDSPLPPPPPVPPALAGKDLKGLRIGVPKELG--GGGPLDPDVRAAFEAAVKALE 291 (475)
T ss_pred CccCcccCCHHHHHHHHHHHcCCCCcccccccccCccchhhccCCCCcEEEEECccc--ccCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999886652 221 1 12367889999998764 335688999999999999999
Q ss_pred hcCCcEEEEecCccchHH--HHHHHH-HHHhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHH-HHH-hCCC
Q psy15609 378 EITEVSAEKLENIKQFKK--SYALWR-YWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMK-LID-MHLP 452 (567)
Q Consensus 378 ~~lG~~V~ev~~lp~~~~--~~~~~~-~~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~-l~~-~~~s 452 (567)
++ |++|+++ ++|.+.. ....|+ ..+.. ..+.. .... . +.........+.+.. ++. ...+
T Consensus 292 ~~-Ga~v~~v-~lp~~~~~~~~~~~~~~~~~~--~~~~~-------~~~~--~---~~~~~~~~~~~~v~~ri~~G~~~~ 355 (475)
T COG0154 292 AA-GAEVVEV-SLPLLSDDYALAAYYLARFDG--ERYGL-------RAAD--L---YGKTRAEGFGPEVKRRIMLGTYLL 355 (475)
T ss_pred HC-CCEEEec-cCCchhhhhhhhHHHHHHhhh--hhhhh-------cchh--h---hhhhhhhcccHHHHHHHhcccccc
Confidence 96 9999999 9995443 333331 11111 00000 0000 0 001111122244444 333 6778
Q ss_pred hHHHHHHHHHHHHH---HHHHHHHhcCCcEEEecCCCCCCCCCCc-c--ccC----CCCcchhHhhHhhCCCeEEEcCCC
Q psy15609 453 LPKDDWAQEQTDKL---RKKLTDVLADDGVLIFPSCPCPATYHYT-T--FFR----PYNFAYWAIFNVLGFPVVNVPVGL 522 (567)
Q Consensus 453 ~~~~~~a~~~r~~l---~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~-~--~~~----~~~~~yT~l~NllGlPaisVP~G~ 522 (567)
..+|..+...+.+. ++++.++|.++|+||+||+|++||.+++ . ... .....||.++|++|+|+++||+|+
T Consensus 356 ~~~~~~a~~~~~~~~~i~~~~~~~f~~~D~ll~Pt~~~~a~~ig~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~ 435 (475)
T COG0154 356 SAGYYDAYYRRAQKTLIRRAFDKLFEEVDVLLTPTTPTPAPKIGESESDGDDPLEMYLLDVFTVPANLAGLPAISVPAGF 435 (475)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCCEEEeCCCCCCCcccccccccccCHHHHhhhccccccccccCCCeEEeccCC
Confidence 88888888888665 9999999999999999999999999987 1 111 112478999999999999999999
Q ss_pred CCCCCceEEEEEcCCCChHHHHHHHHHHHHhhcCCCCCCCC
Q psy15609 523 SKDGLPLGVQIVATTNNDKLCIDVANYLEKQSVIGWKPPFN 563 (567)
Q Consensus 523 ~~~GLPvGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~p~p 563 (567)
+.+|||+||||||++|+|..||++|++||++ .+|..+.|
T Consensus 436 ~~~GlPvGlqlig~~~~d~~LL~~a~~~E~~--~~~~~~~~ 474 (475)
T COG0154 436 TADGLPVGLQLIGPAFDDATLLRLAAALEQA--LGWHRRPP 474 (475)
T ss_pred CCCCCCeeEEEecCCCCHHHHHHHHHHHHHh--hCCCCCCC
Confidence 8889999999999999999999999999999 56766554
No 7
>PRK07486 amidase; Provisional
Probab=100.00 E-value=1.2e-95 Score=796.04 Aligned_cols=446 Identities=25% Similarity=0.374 Sum_probs=370.6
Q ss_pred cchhhhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCCh-HHHHHH
Q psy15609 64 PVENELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRF-SEALEE 142 (567)
Q Consensus 64 ~~~~~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~-~~Al~~ 142 (567)
|..+++..+|+++|+++|++|++|++||+++||+|| +++|+.+|||++.+. ++|+++
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~g~~t~~ev~~~~l~ri----------------------~~~~~~~na~~~~~~~~~al~~ 61 (484)
T PRK07486 4 PPPDPIVRLSAHALSRAIRRRQVSCVEVMRAYLAHI----------------------ERVNPAVNAIVALRDRDALLAE 61 (484)
T ss_pred CChhhhhhCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCCCCceEEEeCccHHHHHH
Confidence 344568889999999999999999999999999999 999999999999866 456999
Q ss_pred HHHhhHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCC
Q psy15609 143 AKLLDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWS 222 (567)
Q Consensus 143 A~~~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~ 222 (567)
|+++|+++++| ...+|||||||+|||+|+++|++||+||..++++++.+||++|++||+||||++||||||||+++.
T Consensus 62 A~~~d~~~~~g---~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rLr~AGaii~GKTn~~Efa~~~ 138 (484)
T PRK07486 62 AAEKDAALARG---EYRGWLHGMPQAPKDLAPTKGIRTTLGSPIFADQVPQEDAIVVERMRAAGAIFIGKTNTPEFGLGS 138 (484)
T ss_pred HHHHHHHHhcC---CCCCCcCCCeEEEecccccCCcCcccccHhhCCCCCCCcHHHHHHHHHCCCeeEEecCchHHhcCC
Confidence 99999999887 367999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCC-CCCCCC
Q psy15609 223 ETRNMVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMG-FRSGKE 301 (567)
Q Consensus 223 ~~~n~~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~-p~~~~~ 301 (567)
++.|++||+|+||||++|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||+.|.. +++
T Consensus 139 ~~~n~~~G~t~NP~~~~~~pGGSSgGsAaaVAaG~~~~aiGtDtgGSIRiPAa~cGvvGlKPT~G~vs~~g~~~~~~--- 215 (484)
T PRK07486 139 HTYNPVYGATRNPYDPSRSAGGSSGGAAAALALRMLPVADGSDMMGSLRNPAAFNNVYGFRPSQGRVPHGPGGDVFV--- 215 (484)
T ss_pred CCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceEeecCCCCCeecchhhhCceeecCCCCcccCCCCccccc---
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999855 566
Q ss_pred CCCcceeccccCCHhhHHHHHHHhcCCcccCcCccccc---------CCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHH
Q psy15609 302 ARTMVSAGPIVKHAEDILPFIKCLVIPEKLHQLKLDRT---------HDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKC 372 (567)
Q Consensus 302 ~~~~~~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~---------~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~a 372 (567)
.++|++|||||+|+|+++++++|+|+++.++.....+ .+++++||||+.+.. ....++++++++++++
T Consensus 216 -~s~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~~~~~~~~~~~~~~~~lrigv~~~~~--~~~~~~~~v~~a~~~a 292 (484)
T PRK07486 216 -QQLGTEGPMGRTVEDVALLLAVQAGYDPRDPLSLAEDPARFAQPLEADLRGKRIAWLGDWG--GYLPMEAGVLELCEAA 292 (484)
T ss_pred -ccccccCCeeCCHHHHHHHHHHHhCCCCCCCccccCCCcchhhHhccCCCCCEEEEeCccc--CCCCCCHHHHHHHHHH
Confidence 7899999999999999999999999887665543211 146889999986532 1236899999999999
Q ss_pred HHHhhhcCCcEEEEecCcc-chHHHHHHHHHHHhcc-CcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHHHHH--
Q psy15609 373 VRALDEITEVSAEKLENIK-QFKKSYALWRYWMTKE-PGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMKLID-- 448 (567)
Q Consensus 373 v~~L~~~lG~~V~ev~~lp-~~~~~~~~~~~~~~~e-~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~l~~-- 448 (567)
++.|+++ |++|+++ .++ ......+.|......+ ...+. +.+.. ........+.+...++
T Consensus 293 ~~~L~~~-G~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~-~~~~~~~~~~~~~~~~~g 355 (484)
T PRK07486 293 LATLREL-GCDVEAA-LPAFPPERLWRAWLTLRHFLVGGSLL--------------ALYRD-PARRALLKPEAIWEIEGG 355 (484)
T ss_pred HHHHHHC-CCEEEEe-CCCcchHHHHHHHHHHHHHHHHHhHH--------------HHhcc-ccchhhcCHHHHHHHHhc
Confidence 9999995 9999988 755 2222223332211100 00000 00000 0000111122222223
Q ss_pred hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCccc-----cCCC-----CcchhHhhHhhCCCeEEE
Q psy15609 449 MHLPLPKDDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTF-----FRPY-----NFAYWAIFNVLGFPVVNV 518 (567)
Q Consensus 449 ~~~s~~~~~~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~-----~~~~-----~~~yT~l~NllGlPaisV 518 (567)
..++..+|.++++.|+.+++.|.++|+++|+||+||+|.++|.++... .... ...||.+||++|+|+++|
T Consensus 356 ~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~Paisv 435 (484)
T PRK07486 356 LALTAAQVYEASVIRSAWYQALLRLFERYDFLALPTAQVFPFDAEWRWPRAIAGRAMDTYHRWMEVVVPATLAGLPAISV 435 (484)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEcCCCCCCCCccccccccccccchhhhhhhhhcccccccccCCCeEEE
Confidence 568889999999999999999999999999999999999998775310 0010 123677999999999999
Q ss_pred cCCCCCCCCceEEEEEcCCCChHHHHHHHHHHHHhhcCCCC
Q psy15609 519 PVGLSKDGLPLGVQIVATTNNDKLCIDVANYLEKQSVIGWK 559 (567)
Q Consensus 519 P~G~~~~GLPvGvQvVg~~~~D~~lLavA~~lE~~~~~gw~ 559 (567)
|+|++.+|||+||||+|++++|+.||++|++||+. .+|+
T Consensus 436 P~g~~~~glPvGlQlvg~~~~D~~lL~~a~~le~~--~~~~ 474 (484)
T PRK07486 436 PVGFNAAGLPMGMQIIGPPRADLAVLQLAHAYEQA--TDWV 474 (484)
T ss_pred ECCcCCCCCceEEEEECCCCCHHHHHHHHHHHHhc--cCcc
Confidence 99998899999999999999999999999999999 5786
No 8
>PRK07488 indole acetimide hydrolase; Validated
Probab=100.00 E-value=4.1e-95 Score=789.36 Aligned_cols=448 Identities=24% Similarity=0.332 Sum_probs=371.6
Q ss_pred hhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhh
Q psy15609 68 ELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLD 147 (567)
Q Consensus 68 ~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D 147 (567)
++..+|+++|+++|++|++|++||+++|++|| ++.| .+|||++.++++|+++|+++|
T Consensus 7 ~~~~~~~~~l~~~l~~g~~s~~ev~~~~l~ri----------------------~~~~-~lna~~~~~~~~al~~A~~~d 63 (472)
T PRK07488 7 DVASLSLTEAAAALRSGRLSCLELVEALLARA----------------------AALA-PLNAFTTVDAEGALAAARRID 63 (472)
T ss_pred hhhhCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhC-cCCEEEEcCHHHHHHHHHHHH
Confidence 47788999999999999999999999999999 8877 599999999999999999999
Q ss_pred HHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCC
Q psy15609 148 KQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNM 227 (567)
Q Consensus 148 ~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~ 227 (567)
++++.|. ..+ ||||||+|||+|+++|++||+||..++++++.+||++|++||+||||++||||||||+++.++.|.
T Consensus 64 ~~~~~g~---~~g-L~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rLr~aGAii~GKTn~~E~~~~~~~~n~ 139 (472)
T PRK07488 64 AQRAAGA---ALL-LAGVPIVIKDNINTAGMPTTAGTPALLGFVPATDAPVVQRLLDAGAVPLGKANMHELAFGITSNNG 139 (472)
T ss_pred HHHhcCC---CCC-cCceEEEEEcccccCCCccCcCChhhccCCCCCCHHHHHHHHHCCCeeeeccChhHHhcCCCCCCC
Confidence 9987763 446 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcce
Q psy15609 228 VFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVS 307 (567)
Q Consensus 228 ~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~ 307 (567)
+||+|+||||+.|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||++|++|++ .++|+
T Consensus 140 ~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~G~vs~~G~~p~~----~~~d~ 215 (472)
T PRK07488 140 AFGAVRNPYDPARIAGGSSGGTAAAVAARLAPAGLGTDTGGSVRIPAALCGVVGLRPTVGRYSGDGVVPIS----HTRDT 215 (472)
T ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHcCCCceeeecCCCCCeecChHhhCceeeccCCCCCCCCCccccc----ccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988 89999
Q ss_pred eccccCCHhhHHHHHHHhcCCcccCcCcccccCCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcEEEEe
Q psy15609 308 AGPIVKHAEDILPFIKCLVIPEKLHQLKLDRTHDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSAEKL 387 (567)
Q Consensus 308 ~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~V~ev 387 (567)
+|||||+|+|+++++++|+|+++.++ +.+++++||||+++++ +..++++++++++++++.|+++ |++|+++
T Consensus 216 ~Gp~arsv~D~a~~~~vl~g~d~~~~-----~~~~~~lrig~~~~~~---~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~ 286 (472)
T PRK07488 216 VGPIARSVADLALLDAVITGDAALPA-----PVALAGLRLGVPAAPF---WDGLDPDVAAVAEAALAKLAAA-GVTFVEL 286 (472)
T ss_pred ccCccCCHHHHHHHHHHhcCCCCCCC-----CcCcCCCEEEEEcchh---ccCCCHHHHHHHHHHHHHHHHC-CCEEEee
Confidence 99999999999999999999874221 2357889999997543 4568999999999999999996 9999999
Q ss_pred cCccchHHHHHH-HHHHHhccC-cchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHH-HHH-hCCChHHHHHHHHH-
Q psy15609 388 ENIKQFKKSYAL-WRYWMTKEP-GNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMK-LID-MHLPLPKDDWAQEQ- 462 (567)
Q Consensus 388 ~~lp~~~~~~~~-~~~~~~~e~-~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~-l~~-~~~s~~~~~~a~~~- 462 (567)
++|.+.+.... +......|. ..+..++...+... .+.+.+.... . ..+..... .+. ..++..+|.++++.
T Consensus 287 -~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 361 (472)
T PRK07488 287 -DLPGLHELNEAVGFPIALYEALADLRAYLRENGAGV-SFEELVARIA--S-PDVRAIFRDLLDPPQISEDAYRAALDVG 361 (472)
T ss_pred -CCcCHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCC-CHHHHHhhcc--C-HHHHHHHHHHhhcccCCHHHHHHHHHHH
Confidence 88776543221 111111111 11222222111111 1222221111 1 11111111 122 35788899999888
Q ss_pred HHHHHHHHHHHhc--CCcEEEecCCCCCCCCCCcccc-----C---C--CCcchhHhhHhhCCCeEEEcCCCCCCCCceE
Q psy15609 463 TDKLRKKLTDVLA--DDGVLIFPSCPCPATYHYTTFF-----R---P--YNFAYWAIFNVLGFPVVNVPVGLSKDGLPLG 530 (567)
Q Consensus 463 r~~l~~~~~~ll~--~~dvLL~Pt~p~~Ap~~~~~~~-----~---~--~~~~yT~l~NllGlPaisVP~G~~~~GLPvG 530 (567)
|+.+++.|.++|+ ++|+||+||+|.++|++++... . . ....||.+||++|+|+++||+|++.+|||+|
T Consensus 362 r~~~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~t~~~n~~G~PaisvP~g~~~~glPvG 441 (472)
T PRK07488 362 RPRLQAWYRQAFARHGLDAILFPTTPLTAPPIGDDDTVILNGAAVPTFARVIRNTDPASNAGLPGLSLPAGLTPHGLPVG 441 (472)
T ss_pred HHHHHHHHHHHHhhCCCCEEEeCCCCCCCccccccccccccccchhhhhhhhcccccccccCCCeEEEecCCCCCCCCee
Confidence 9999999999998 6899999999999998875310 0 0 1124789999999999999999988999999
Q ss_pred EEEEcCCCChHHHHHHHHHHHHhhcCCCCCC
Q psy15609 531 VQIVATTNNDKLCIDVANYLEKQSVIGWKPP 561 (567)
Q Consensus 531 vQvVg~~~~D~~lLavA~~lE~~~~~gw~~p 561 (567)
|||+|++++|..||++|++||+. ++.|++|
T Consensus 442 lqlig~~~~d~~LL~~A~~lE~~-~~~~~~~ 471 (472)
T PRK07488 442 LELDGPAGSDRRLLAIGRALERV-LGRLPAP 471 (472)
T ss_pred EEEeCCCCCHHHHHHHHHHHHHh-hCCCCCC
Confidence 99999999999999999999999 7555554
No 9
>TIGR02715 amido_AtzE amidohydrolase, AtzE family. Members of this protein family are aminohydrolases related to, but distinct from, glutamyl-tRNA(Gln) amidotransferase subunit A. The best characterized member is the biuret hydrolase of Pseudomonas sp. ADP, which hydrolyzes ammonia from the three-nitrogen compound biuret to yield allophanate. Allophanate is also an intermediate in urea degradation by the urea carboxylase/allophanate hydrolase pathway, an alternative to urease.
Probab=100.00 E-value=6.2e-95 Score=783.93 Aligned_cols=426 Identities=27% Similarity=0.389 Sum_probs=359.6
Q ss_pred CHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhhHHHHc
Q psy15609 73 SATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDKQIAL 152 (567)
Q Consensus 73 s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~~~~~ 152 (567)
|+++|+++|++|++|++||+++||+|| +++|+.+|||++..+++|+++|+++|+++++
T Consensus 1 ~~~~l~~~l~~g~~s~~ev~~~~l~ri----------------------~~~~~~lna~~~~~~~~al~~A~~~d~~~~~ 58 (452)
T TIGR02715 1 SIVEIAGAIRSGRVSARAVAEATLARI----------------------NQADGGLNAFTAVTAERALADAARIDADLAA 58 (452)
T ss_pred CHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHHCCCccEEEEeCHHHHHHHHHHHHHHHHC
Confidence 689999999999999999999999999 9999999999999999999999999999988
Q ss_pred CCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCC-CCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCCCCC
Q psy15609 153 DEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKG-TEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVFGQ 231 (567)
Q Consensus 153 ~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a-~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~G~ 231 (567)
| +..+|||||||+|||+|+++|++||+||..++++++ .+||++|++||+||||++||||||||+++.++.|.+||+
T Consensus 59 g---~~~gpL~GvPv~vKD~~~v~G~~tt~Gs~~~~~~~p~~~dA~vV~rL~~AGAii~GkTn~~Ef~~~~~~~n~~~G~ 135 (452)
T TIGR02715 59 G---SPLGPLAGVPFAVKNLFDVAGLTTLAGAKINRDLAPAKRDATLVQRLSAAGAVLVGALNMDEFAYGFTTENAHYGP 135 (452)
T ss_pred C---CCCCCcCCCeEEEEeccccCCceeCcCChhhccCCCCCCCHHHHHHHHHCCCEEEEeccCHhhhcCCCCCCCCCCC
Confidence 7 367999999999999999999999999999999887 799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcceeccc
Q psy15609 232 TNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSAGPI 311 (567)
Q Consensus 232 t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~Gpm 311 (567)
|+||||++|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||+.|++|++ .++|++|||
T Consensus 136 t~NP~~~~~~~GGSSgGsAaaVAag~~~~alGtDtgGSiRiPAa~cGv~GlKPT~Grvs~~G~~~~~----~s~d~~Gp~ 211 (452)
T TIGR02715 136 TRNPHDLTRIAGGSSGGSAAAVAAGLVPFSLGSDTNGSIRVPASLCGVFGLKPTYGRLSRQGVFPFV----ASLDHVGPF 211 (452)
T ss_pred CCCCCCCCCCCCcchHHHHHHHHCCCCceEEeeCCCCcchhhHHHhCceeeeCCCCCccCCCCCCCc----cccCcccCe
Confidence 9999999999999999999999999999999999999999999999999999999999999999988 899999999
Q ss_pred cCCHhhHHHHHHHhcCCcccCcCccccc---------CCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCc
Q psy15609 312 VKHAEDILPFIKCLVIPEKLHQLKLDRT---------HDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEV 382 (567)
Q Consensus 312 aR~v~Dl~~ll~v~ag~~p~~~~~l~~~---------~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~ 382 (567)
||+|+|+++++++|+|+++.|+.....+ .+++++||||+.+. +...++++++++++++++.|+..
T Consensus 212 arsv~D~a~~l~~l~g~~~~d~~~~~~p~~~~~~~~~~~~~~lrig~~~~~---~~~~~~~~v~~a~~~a~~~L~~~--- 285 (452)
T TIGR02715 212 ARSVEDLALAYDVMQGPDPQDPFCTDRPAEPTVPLLPAGISGLRIAVLGGW---FQQNADPEALAAVGRVAKALGAT--- 285 (452)
T ss_pred eCCHHHHHHHHHHhcCCCCCCcccccCCCcchhhhhhcCCCCCEEEEECcc---ccCCCCHHHHHHHHHHHHhcCCe---
Confidence 9999999999999999876665433211 13688999998542 23468999999999999998553
Q ss_pred EEEEecCccchHHHHHHHHHHHhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHHHHH--hCCChHHHHHHH
Q psy15609 383 SAEKLENIKQFKKSYALWRYWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMKLID--MHLPLPKDDWAQ 460 (567)
Q Consensus 383 ~V~ev~~lp~~~~~~~~~~~~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~l~~--~~~s~~~~~~a~ 460 (567)
. ++ ++|........++..+..|.. ..+ .+ +.....+...+.+...+. ..++..+|.+++
T Consensus 286 ~--~v-~~~~~~~~~~~~~~~~~~e~~---~~~----------~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~ 346 (452)
T TIGR02715 286 T--IV-ELPDAERARAAAFVITASEGG---NLH----------LD---ALRTRPQDFDPATRDRLLAGALLPASWYAQAQ 346 (452)
T ss_pred e--ee-cCCchHHHHHHHHHHHHHHHH---HHH----------HH---HhhhchhhcCHHHHHHHHcccCCCHHHHHHHH
Confidence 2 24 445544333333333222110 000 01 111111111233333223 557889999999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCcccc----CC-----CCcchhHhhHhhCCCeEEEcCCCCCCCCceEE
Q psy15609 461 EQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFF----RP-----YNFAYWAIFNVLGFPVVNVPVGLSKDGLPLGV 531 (567)
Q Consensus 461 ~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~----~~-----~~~~yT~l~NllGlPaisVP~G~~~~GLPvGv 531 (567)
+.|+.+++.|.++|+++|+||+||+|.+||.++.... .. ....||.+||++|+|+++||+|+ .+|||+|+
T Consensus 347 ~~r~~~~~~~~~~~~~~Dvll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~-~~glPvGl 425 (452)
T TIGR02715 347 RFRHWFRDAIRELFQRVDVLIAPATPCSAPLIGQETMIIDGVPVPVRANLGIFTQPISFAGLPVLAAPLPR-PGRLPIGV 425 (452)
T ss_pred HHHHHHHHHHHHHHhcCCEEEeCCCCCCCCcCcccccccCccchhhhhhHHhcCccchhcCCCeEEEeCCC-CCCCCeEE
Confidence 9999999999999999999999999999998864210 00 11248999999999999999998 58999999
Q ss_pred EEEcCCCChHHHHHHHHHHHHh
Q psy15609 532 QIVATTNNDKLCIDVANYLEKQ 553 (567)
Q Consensus 532 QvVg~~~~D~~lLavA~~lE~~ 553 (567)
||||++++|+.||++|++||++
T Consensus 426 Qivg~~~~D~~lL~~a~~le~~ 447 (452)
T TIGR02715 426 QLIAAPWREDLCLRAAAVLERQ 447 (452)
T ss_pred EEECCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999987
No 10
>PRK09201 amidase; Provisional
Probab=100.00 E-value=9.1e-95 Score=784.77 Aligned_cols=438 Identities=27% Similarity=0.355 Sum_probs=366.7
Q ss_pred hhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhhH
Q psy15609 69 LLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDK 148 (567)
Q Consensus 69 i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~ 148 (567)
+..+|+++|+++|++|++|++||+++||+|| +++|+.+|||++.++++|+++|+++|+
T Consensus 4 ~~~~~~~~l~~~~~~g~~t~~ev~~~~l~ri----------------------~~~~~~lna~~~~~~d~al~~A~~~d~ 61 (465)
T PRK09201 4 LSSLSAAEIAAAVRAGELSARAVAQATLARI----------------------ARANPQLNAFTAVTAERALAEAARIDA 61 (465)
T ss_pred cccCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCCCceEEEEcCHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCC-CCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCC
Q psy15609 149 QIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKG-TEDAYIVERLKSAGAILLGVTNVPELCLWSETRNM 227 (567)
Q Consensus 149 ~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a-~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~ 227 (567)
++++| +..+|||||||+|||+|+++|++||+||..+++.++ ++||++|++||+||||++||||||||+++.++.|+
T Consensus 62 ~~~~g---~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~~dA~vV~~Lr~aGAii~GKTn~~Efa~~~~~~n~ 138 (465)
T PRK09201 62 ARAAG---EPLGPLAGVPFAVKNLFDVAGLTTLAGSKINRDRPPATRDATAVRRLEAAGAVLVGALNMDEYAYGFTTENS 138 (465)
T ss_pred HHHcC---CCCCCcCCceEEEEeccccCCcccCcCChhhccCCCCCCChHHHHHHHHCCCEEEEecChHHHhcCCCCCCC
Confidence 99887 367999999999999999999999999999999988 69999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcce
Q psy15609 228 VFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVS 307 (567)
Q Consensus 228 ~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~ 307 (567)
+||+|+||||++|+||||||||||+||+|++++|+|||+|||||+||+||||||||||+|+||+.|++|++ .++|+
T Consensus 139 ~~G~t~NP~~~~~~pGGSSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGv~G~KPT~Grvs~~G~~~~~----~s~d~ 214 (465)
T PRK09201 139 HYGATRNPHDLTRIAGGSSGGSAAAVAAGLVPFTLGSDTNGSIRVPASLCGIFGLKPTYGRLSRAGSFPFV----ASLDH 214 (465)
T ss_pred CCCCCCCCCCCCCCCCcchHHHHHHHHcCCCceEEecCCCCcchhhhHHhCceeeeCCCCccCCCCCCCcc----cccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988 79999
Q ss_pred eccccCCHhhHHHHHHHhcCCcccCcCccccc---------CCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhh
Q psy15609 308 AGPIVKHAEDILPFIKCLVIPEKLHQLKLDRT---------HDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDE 378 (567)
Q Consensus 308 ~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~---------~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~ 378 (567)
+|||||+++|+++++++|+|+++.|+.....+ .+++++||||+.+. +...++++++++++++++.|+.
T Consensus 215 ~Gp~arsv~D~a~~l~~l~g~d~~d~~~~~~~~~~~~~~~~~~~~~lrig~~~~~---~~~~~~~~v~~a~~~a~~~L~~ 291 (465)
T PRK09201 215 IGPFARSVADLALVYDVLQGPDPQDPFQADRPAEPTAPLLDRGAEGLRIAVLGGY---FAQWADPEARAAVDRVAKALGA 291 (465)
T ss_pred ccCccCCHHHHHHHHHHhcCCCCCCcccccCCCcchhhhhccCCCCCEEEEECcc---ccCCCCHHHHHHHHHHHHHccC
Confidence 99999999999999999999876665433221 13578999999653 2346899999999999999855
Q ss_pred cCCcEEEEecCccchHHHHHHHHHHHhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHHHHH--hCCChHHH
Q psy15609 379 ITEVSAEKLENIKQFKKSYALWRYWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMKLID--MHLPLPKD 456 (567)
Q Consensus 379 ~lG~~V~ev~~lp~~~~~~~~~~~~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~l~~--~~~s~~~~ 456 (567)
. . ++ ++|........++..+..|.. .. +.+.++ ...+...+.+...+. ..++..+|
T Consensus 292 ~---~--~v-~~~~~~~~~~~~~~~~~~e~~---~~----------~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~ 349 (465)
T PRK09201 292 T---R--EV-ELPEAARARAAAFIITASEGG---NL----------HLPALR---TRPQDFDPASRDRLLAGAMLPAAWY 349 (465)
T ss_pred c---e--ee-cCCchhHHHHHHHHHHHHHHH---HH----------HHHHHh---hhhhhcCHHHHHHHHhhcCCCHHHH
Confidence 2 2 34 445544443333222221110 00 011110 011111133333223 56889999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCcccc----C-----CCCcchhHhhHhhCCCeEEEcCCCCCCCC
Q psy15609 457 DWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFF----R-----PYNFAYWAIFNVLGFPVVNVPVGLSKDGL 527 (567)
Q Consensus 457 ~~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~----~-----~~~~~yT~l~NllGlPaisVP~G~~~~GL 527 (567)
.++++.|+.++++|.++|+++|+||+||+|.+||.+++... . .....||.+||++|+|+++||+|. .+||
T Consensus 350 ~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~-~~Gl 428 (465)
T PRK09201 350 VQAQRFRRWFRQAVLELFEHVDVLIAPATPCSAPLIGQETMRIDGVELPVRANLGILTQPISFIGLPVVAVPLRT-PGGL 428 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCcccccccccCcchhhhhhhHHHhCccccccCCCeEEEeCCC-CCCc
Confidence 99999999999999999999999999999999999865210 0 011348999999999999999996 6799
Q ss_pred ceEEEEEcCCCChHHHHHHHHHHHHhhcCCCCCCCC
Q psy15609 528 PLGVQIVATTNNDKLCIDVANYLEKQSVIGWKPPFN 563 (567)
Q Consensus 528 PvGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~p~p 563 (567)
|+||||+|++++|+.||++|++||++ +.-..|.|
T Consensus 429 PvGlQivg~~~~D~~lL~~A~~le~~--~~~~~~~~ 462 (465)
T PRK09201 429 PIGVQLIAAPWREDLALRAAAALEQQ--GVAAAPVP 462 (465)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHhh--CcccCcCC
Confidence 99999999999999999999999999 44444444
No 11
>PRK07056 amidase; Provisional
Probab=100.00 E-value=9.8e-95 Score=782.31 Aligned_cols=430 Identities=20% Similarity=0.222 Sum_probs=368.2
Q ss_pred CHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcC-cccEEEeCChHHHHHHHHHhhHHHH
Q psy15609 73 SATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNS-KINSVVDNRFSEALEEAKLLDKQIA 151 (567)
Q Consensus 73 s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~-~lna~v~~~~~~Al~~A~~~D~~~~ 151 (567)
|+++|+++|++|++|++||+++||+|| +++|+ .+||+++.++++|+++|+++|++++
T Consensus 7 ~~~~l~~~~~~g~~s~~ev~~~~l~ri----------------------~~~~~~~lna~~~~~~~~al~~A~~~d~~~~ 64 (454)
T PRK07056 7 TLAALAADLAAGRTTSRALVEAALARI----------------------ADPAGEGARVFTHVDADAARAAADAADALRA 64 (454)
T ss_pred CHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HhhCCCCccEEEEeCHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999 99997 5999999999999999999999988
Q ss_pred cCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCC-CCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCCCC
Q psy15609 152 LDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKG-TEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVFG 230 (567)
Q Consensus 152 ~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a-~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~G 230 (567)
.| ...+|||||||+|||+|+++|++||+||..+++.++ ++||++|++||+||||++||||||||+++.++.|.+||
T Consensus 65 ~g---~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~~dA~vV~rLr~aGAii~GKTn~~E~~~~~~~~n~~~G 141 (454)
T PRK07056 65 AG---AAPSPLAGIPVSVKDLFDVAGQVTRAGSRVLADAPPAAADAPAVARLRRAGAVLIGRTNMTEFAFSGLGLNPHYG 141 (454)
T ss_pred CC---CCCCCcCCCeEEEEeeeccCCCccCCCChhhccCCCCCCCHHHHHHHHHCCCEEEEeccchhHhhCCCCCCCCCC
Confidence 77 367999999999999999999999999999999988 69999999999999999999999999999999999999
Q ss_pred CCCCCC----CCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcc
Q psy15609 231 QTNNPY----NLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMV 306 (567)
Q Consensus 231 ~t~NP~----~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~ 306 (567)
+|+||| |++|+||||||||||+||+|++++|+|||+|||||+||+||||||||||+|+||+.|++|++ .++|
T Consensus 142 ~t~NP~~~~~~~~~~~GGSSgGsAaaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~G~vs~~G~~~~~----~~~d 217 (454)
T PRK07056 142 TPRNPWRRDVGDGRIPGGSSSGAAVSVADGMAAAALGTDTGGSIRIPAALCGLTGFKPTARRVPLQGAVPLS----TTLD 217 (454)
T ss_pred CCCCCCCCCCCCCcCCCCcchHHHHHHHcCCCceEEeeCCCCccccchHhhCceeeccCCCccCCCCcccCc----cccC
Confidence 999999 89999999999999999999999999999999999999999999999999999999999988 8999
Q ss_pred eeccccCCHhhHHHHHHHhcCCcccCcCcccccCCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcEEEE
Q psy15609 307 SAGPIVKHAEDILPFIKCLVIPEKLHQLKLDRTHDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSAEK 386 (567)
Q Consensus 307 ~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~V~e 386 (567)
++|||||+++|+++++++|+|+++.++.. .+++++||||+.+.. ...++++++++++++++.|++. |++|++
T Consensus 218 ~~Gp~arsv~D~a~~~~vl~g~d~~d~~~----~~~~~lrig~~~~~~---~~~~~~~v~~~~~~a~~~L~~~-G~~v~~ 289 (454)
T PRK07056 218 SIGPLARSVACCALVDAVLAGEEPVVPAA----RPLEGLRLAVPTTVV---LDGLDATVAAAFERALKRLSAA-GAIIEE 289 (454)
T ss_pred cccCccCCHHHHHHHHHHhcCCCCCCccc----ccccCcEEEEcchhh---ccCCCHHHHHHHHHHHHHHHHC-CCEEEE
Confidence 99999999999999999999987555433 246789999986532 3568999999999999999996 999999
Q ss_pred ecCccchHHHHHHHHH-HHhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHHHHH--hCCChHHHHHHHHHH
Q psy15609 387 LENIKQFKKSYALWRY-WMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMKLID--MHLPLPKDDWAQEQT 463 (567)
Q Consensus 387 v~~lp~~~~~~~~~~~-~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~l~~--~~~s~~~~~~a~~~r 463 (567)
+ ++|.+.+..+++.. .+.. .+ .... +..++. ...+...+.+...+. ..++..+|.++++.|
T Consensus 290 ~-~~~~~~~~~~~~~~~~~~~-~e-~~~~----------~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~r 353 (454)
T PRK07056 290 I-AFPELAELAEINAKGGFSA-AE-SYAW----------HRPLLA---RHRDQYDPRVAARILRGEPMSAADYIDLLAAR 353 (454)
T ss_pred e-cCcchHHHHHHHHhhhHHH-HH-HHHH----------HHHHHh---hhhhhCCHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 9 88876655544311 1110 00 0000 001110 011111233333333 578889999999999
Q ss_pred HHHHHHHHHHhcCCcEEEecCCCCCCCCCCccccC--CC------CcchhHhhHhhCCCeEEEcCCCCCCCCceEEEEEc
Q psy15609 464 DKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFFR--PY------NFAYWAIFNVLGFPVVNVPVGLSKDGLPLGVQIVA 535 (567)
Q Consensus 464 ~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~~--~~------~~~yT~l~NllGlPaisVP~G~~~~GLPvGvQvVg 535 (567)
+.+++.|.++|+++|+||+|++|.+||.+++.... .+ ...||.+||++|+|+++||+|+ .+|||+||||+|
T Consensus 354 ~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~g~PaisvP~g~-~~glPvGlqivg 432 (454)
T PRK07056 354 AAWIARAAARLARFDALVMPTVPIVPPRIADLEADDAAFFRTNALLLRNPSLINFLDGCALSLPCHA-PGEAPVGLMLAG 432 (454)
T ss_pred HHHHHHHHHHHccCCEEEECCCCCCCCCcccccccchhhHHHHHHHhhcCccchhcCCCEEEEeCCC-CCCCCEEEEEEC
Confidence 99999999999999999999999999998652100 01 1247899999999999999997 679999999999
Q ss_pred CCCChHHHHHHHHHHHHhhcCC
Q psy15609 536 TTNNDKLCIDVANYLEKQSVIG 557 (567)
Q Consensus 536 ~~~~D~~lLavA~~lE~~~~~g 557 (567)
++++|+.||++|++||+. +.|
T Consensus 433 ~~~~D~~lL~~a~~le~~-l~~ 453 (454)
T PRK07056 433 APGRDDRLLAIALAVEAV-LRG 453 (454)
T ss_pred CCCCHHHHHHHHHHHHHH-hcc
Confidence 999999999999999998 654
No 12
>PRK06102 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-94 Score=780.89 Aligned_cols=432 Identities=22% Similarity=0.253 Sum_probs=366.9
Q ss_pred hhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhhH
Q psy15609 69 LLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDK 148 (567)
Q Consensus 69 i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~ 148 (567)
+..+|+.+|+++|++|++|++||+++||+|| +++|+ +|||++..+++|+++|+++|+
T Consensus 3 ~~~~~~~~l~~~l~~g~~s~~ev~~~~l~ri----------------------~~~~~-~na~~~~~~~~al~~A~~~d~ 59 (452)
T PRK06102 3 TGAKSAAQLAVLIQSGALDPVQVAEQALDAI----------------------ASYAD-QAVFISLTEERAMREAEASSA 59 (452)
T ss_pred ccccCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HhhCC-CCEEEEeCHHHHHHHHHHHHH
Confidence 3457899999999999999999999999999 88896 899999999999999999999
Q ss_pred HHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCC-CCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCC
Q psy15609 149 QIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKG-TEDAYIVERLKSAGAILLGVTNVPELCLWSETRNM 227 (567)
Q Consensus 149 ~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a-~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~ 227 (567)
+++.| +..+|||||||+|||+|+++|++||+||..++++++ .+||++|++||+||||++||||||||+++.++.|.
T Consensus 60 ~~~~g---~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~~dA~vV~rL~~aGAii~GKTn~~E~a~~~~~~n~ 136 (452)
T PRK06102 60 RWRAG---RSLGLLDGIPIAWKDLFDVAGSVTTAGSVVLANAAPASRDAAVVALLARAGMVSIGRTNMSEFAFSGLGLNP 136 (452)
T ss_pred HHHCC---CCCCCcCCCeEEEEeccccCCCccCcCChhhccCCCCCCCHHHHHHHHHCCCEEEEeechHhHhcCCCCCCC
Confidence 99877 367999999999999999999999999999999876 79999999999999999999999999999999999
Q ss_pred CCCCCCCCCCC--CCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCc
Q psy15609 228 VFGQTNNPYNL--SRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTM 305 (567)
Q Consensus 228 ~~G~t~NP~~~--~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~ 305 (567)
+||+|+||||+ .|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||+.|++|++ +++
T Consensus 137 ~~G~t~NP~~~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGv~G~KPT~G~v~~~G~~~~~----~s~ 212 (452)
T PRK06102 137 HYGTPVNPRSTDVPRIPGGSSSGSAVAVAAGLVPVAMGTDTGGSVRIPAAFNGLVGYKATRGRYSMDGVFPLA----KSL 212 (452)
T ss_pred CCCCCCCCCCCCCCcCCCCCcHHHHHHHHcCCCceEEecCCCCcchhhhHHhCceeEecCCCcccCCCCcccc----ccc
Confidence 99999999986 799999999999999999999999999999999999999999999999999999999988 899
Q ss_pred ceeccccCCHhhHHHHHHHhcCCcccCcCcccccCCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcEEE
Q psy15609 306 VSAGPIVKHAEDILPFIKCLVIPEKLHQLKLDRTHDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSAE 385 (567)
Q Consensus 306 ~~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~V~ 385 (567)
|++|||||+++|+++++++|+|.++.+.. +..++++||++..+. +...+++++.++++++++.|+++ |++|+
T Consensus 213 d~~Gp~arsv~D~a~~~~~l~g~~~~~~~----~~~~~~~ri~~~~~~---~~~~~~~~v~~~~~~a~~~L~~~-G~~v~ 284 (452)
T PRK06102 213 DSLGPLCRSVRDAVWIDAAMRGLTAPDVV----RRPLAGLRLVVPETV---VFDDAEPGVRAAFEAAVERLQAA-GALVE 284 (452)
T ss_pred CcccCccCCHHHHHHHHHHHcCCCCcccc----ccCCCCCEEEEecch---hcccCCHHHHHHHHHHHHHHHhC-CCEEE
Confidence 99999999999999999999998633222 124678999997653 23568999999999999999996 99999
Q ss_pred EecCccchHHHHHHHHH--HH-hccCcchhHHhhhcccccchHHHHHHHHhC-CCCCchHHHHHHHH--hCCChHHHHHH
Q psy15609 386 KLENIKQFKKSYALWRY--WM-TKEPGNFARDLVNQEGEASWWRETIKIFLG-MSDHTLPAIMKLID--MHLPLPKDDWA 459 (567)
Q Consensus 386 ev~~lp~~~~~~~~~~~--~~-~~e~~~~~~~l~~~~~~~~~~~el~k~~~~-~s~~~~~~~~~l~~--~~~s~~~~~~a 459 (567)
++ ++|.+.+...++.. .+ ..|. . . ....+... ..+...+.+...++ ..++..+|.++
T Consensus 285 ~~-~~~~~~~~~~~~~~~~~~~~~e~--~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a 347 (452)
T PRK06102 285 RQ-AFPAFQEILDLIARHGWLVTAEA--F-A-------------LHQERLDGPDAARMDPRVVKRTRLGRKITASDYIAL 347 (452)
T ss_pred ec-CCccHHHHHHHHHHHHHHHHHHH--H-H-------------HHHHHhhccchhhCCHHHHHHHHhccCCCHHHHHHH
Confidence 99 88877655543211 11 1100 0 0 00001101 01111133323233 56888999999
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCcccc--------CCCCcchhHhhHhhCCCeEEEcCCCCCCCCceEE
Q psy15609 460 QEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFF--------RPYNFAYWAIFNVLGFPVVNVPVGLSKDGLPLGV 531 (567)
Q Consensus 460 ~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~--------~~~~~~yT~l~NllGlPaisVP~G~~~~GLPvGv 531 (567)
++.|++++++|.++|+ +|+||+||+|.+||.+++... ....+.||.+||++|+|+++||+|++.+|||+||
T Consensus 348 ~~~r~~~~~~~~~~~~-~D~ll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~~t~~~nl~g~PaisvP~g~~~~glPvGl 426 (452)
T PRK06102 348 LEARERLIAQVTRELG-GALLATPTVAHVAPPLAPLEADDDLFFATNLKTLRNTMPGNFLDMCGVSLPCGTGAAGMPVGL 426 (452)
T ss_pred HHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCccccccCchhhhhhhhhhhhcCccccccCCCeEEEecCCCCCCCCEEE
Confidence 9999999999999998 899999999999998864210 0112358999999999999999999889999999
Q ss_pred EEEcCCCChHHHHHHHHHHHHhhcCC
Q psy15609 532 QIVATTNNDKLCIDVANYLEKQSVIG 557 (567)
Q Consensus 532 QvVg~~~~D~~lLavA~~lE~~~~~g 557 (567)
||||++++|+.||++|++||++ +++
T Consensus 427 Qivg~~~~D~~lL~~a~~le~~-l~~ 451 (452)
T PRK06102 427 LLSAPAGRDERLLRAALAVEAV-IRG 451 (452)
T ss_pred EEECCCCCHHHHHHHHHHHHHH-hcC
Confidence 9999999999999999999998 643
No 13
>PRK08137 amidase; Provisional
Probab=100.00 E-value=6.5e-94 Score=784.69 Aligned_cols=452 Identities=19% Similarity=0.248 Sum_probs=367.6
Q ss_pred hhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHH---cCcccEEEeCChHHHHHHHH
Q psy15609 68 ELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQV---NSKINSVVDNRFSEALEEAK 144 (567)
Q Consensus 68 ~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~---n~~lna~v~~~~~~Al~~A~ 144 (567)
+++.+|+.+|+++|++|++||+||+++||+|| +++ |+.+|||++..+ +|+++|+
T Consensus 2 ~~~~~~~~~l~~~l~~g~~t~~ev~~~~l~ri----------------------~~~~~~~~~lna~~~~~~-~al~~A~ 58 (497)
T PRK08137 2 TALEERAGALQAAMPAGAAPASQLTRAYLQRI----------------------ARIDRDGPRLNAVIELNP-DAEADAA 58 (497)
T ss_pred chhhCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhcCCCCceeEEEEeCH-HHHHHHH
Confidence 46788999999999999999999999999999 766 789999999876 5999999
Q ss_pred HhhHHHHcCCCCCCCCCcccceEEeecCcCCC-CCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccC--
Q psy15609 145 LLDKQIALDEIDFSQKPFLGVPFTSKNSTASK-GLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLW-- 221 (567)
Q Consensus 145 ~~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~-G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~-- 221 (567)
++|+++++| ...+|||||||+|||+|+++ |++||+||..++++++.+||++|++||+||||++||||||||+++
T Consensus 59 ~~d~~~~~g---~~~gpL~GvPi~vKD~~~v~~G~~tt~Gs~~~~~~~~~~DA~vV~rLr~AGAii~GKTn~~Efa~~~~ 135 (497)
T PRK08137 59 ALDAERKAG---KVRGPLHGIPVLLKDNIDAADPMPTTAGSLALAGNRPTRDAFLVARLRDAGAVILGKANLSEWANFRS 135 (497)
T ss_pred HHHHHHhcC---CCCCCcCCceeeeecceeecCCCCcCcCcHhhcCCCCCcCcHHHHHHHHCCCEEEeecChHHhhccCC
Confidence 999998877 36799999999999999999 999999999999999999999999999999999999999999954
Q ss_pred ---CCCCCCCCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCC
Q psy15609 222 ---SETRNMVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRS 298 (567)
Q Consensus 222 ---~~~~n~~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~ 298 (567)
.+++|.+||+|+||||++|+||||||||||+||+|++++|+|||+|||||+||+||||||||||+|+||+.|++|++
T Consensus 136 ~~~~~g~n~~~G~t~NP~~~~~~~GGSSgGsAaAVAaG~~~~aiGtDtgGSiRiPAa~cGv~GlKPT~Grvs~~G~~~~~ 215 (497)
T PRK08137 136 TRSSSGWSARGGLTRNPYALDRSPCGSSSGSGAAVAAGLAAVAIGTETDGSITCPAAINGLVGLKPTVGLVSRDGIVPIS 215 (497)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCcCccHHHHHHHcCCCceeeecCCCCccccchhhcCeeeecCCCCceeCCCCCCcc
Confidence 44589999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCcceeccccCCHhhHHHHHHHhcCCcccCcCccccc------------CCCCCcEEEEEcCCCCCCCCCCCHHHH
Q psy15609 299 GKEARTMVSAGPIVKHAEDILPFIKCLVIPEKLHQLKLDRT------------HDLKQLKVFYVEQPGDLKVSPVSGEMI 366 (567)
Q Consensus 299 ~~~~~~~~~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~------------~~l~~lrIg~~~~~g~~~~~~vd~~v~ 366 (567)
+++|++|||+|+|+|+++++++|+|+++.|+.....+ ..++++||||+.+. . .++++++
T Consensus 216 ----~s~d~~Gp~arsv~D~a~~l~vl~g~d~~d~~~~~~~~~~~~~~~~~~~~~~~~lrIgv~~~~----~-~~~~~v~ 286 (497)
T PRK08137 216 ----HSQDTAGPMTRTVADAAAVLTAIAGGDPADPATASAPAPAVDYVAALDADALRGARLGVARNY----L-GYHPEVD 286 (497)
T ss_pred ----cccCcccCeeCCHHHHHHHHHHHhCCCCCCcccccCCCCccchhhhccccccCCCEEEEEchh----c-cCCHHHH
Confidence 7899999999999999999999999886665433211 13688999998652 2 4799999
Q ss_pred HHHHHHHHHhhhcCCcEEEEecCccchHHHHHHHHHHHhccCc-chhHHhhhc--ccccchHHHHHHHHhCCC----CCc
Q psy15609 367 GAIRKCVRALDEITEVSAEKLENIKQFKKSYALWRYWMTKEPG-NFARDLVNQ--EGEASWWRETIKIFLGMS----DHT 439 (567)
Q Consensus 367 ~a~~~av~~L~~~lG~~V~ev~~lp~~~~~~~~~~~~~~~e~~-~~~~~l~~~--~~~~~~~~el~k~~~~~s----~~~ 439 (567)
++++++++.|+++ |++|+++ ++|.+......+...+..|.. .+..++... ......+.+++.+..... ...
T Consensus 287 ~a~~~a~~~L~~~-G~~v~~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (497)
T PRK08137 287 AQFERALAELKAA-GAVVIDV-VDLDDGDWGEAEKVVLLHEFKAGLNAYLRSTAPHAPVRTLADLIAFNRAQHAREMPYF 364 (497)
T ss_pred HHHHHHHHHHHHC-CCEEEec-cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhhccchhhhccc
Confidence 9999999999995 9999999 877654433332222222111 111222110 011122334433221100 111
Q ss_pred hHHHHHHHH--hCCChHHHHHHHHHHHHH--HHHHHHHhc--CCcEEEecCCCCCCCCCCccccCCCCcchhHhhHhhCC
Q psy15609 440 LPAIMKLID--MHLPLPKDDWAQEQTDKL--RKKLTDVLA--DDGVLIFPSCPCPATYHYTTFFRPYNFAYWAIFNVLGF 513 (567)
Q Consensus 440 ~~~~~~l~~--~~~s~~~~~~a~~~r~~l--~~~~~~ll~--~~dvLL~Pt~p~~Ap~~~~~~~~~~~~~yT~l~NllGl 513 (567)
.+.+...+. ..++..+|.++++.++.+ +++|.++|+ ++|+||+||++ +||.+++.........||.+||++|+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~D~ll~Pt~~-~ap~~~~~~~~~~~~~~t~~~nl~G~ 443 (497)
T PRK08137 365 GQELFEQAQAAPGLDDPAYLDALADAKRLAGPEGIDAALKEHRLDALVAPTTG-PAWLIDLINGDSFGGSSSTPAAVAGY 443 (497)
T ss_pred CHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEeCCCC-CCcccccccccccccccccccHhhCC
Confidence 133333222 567889999998766555 478999997 67999999999 88888642212222347889999999
Q ss_pred CeEEEcCCCCCCCCceEEEEEcCCCChHHHHHHHHHHHHhhcCCCCC
Q psy15609 514 PVVNVPVGLSKDGLPLGVQIVATTNNDKLCIDVANYLEKQSVIGWKP 560 (567)
Q Consensus 514 PaisVP~G~~~~GLPvGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~ 560 (567)
|+++||+|+. +|||+||||||++|+|+.||++|++||+. + .|+.
T Consensus 444 PaisvP~g~~-~GlPvGvQlig~~~~d~~LL~~a~~lE~~-~-~~~~ 487 (497)
T PRK08137 444 PHLTVPMGQV-QGLPVGLSFIGAAWSEARLLELGYAYEQA-T-HARR 487 (497)
T ss_pred CeEEEeCCCC-CCcCeEEEEECCCCCHHHHHHHHHHHHHh-c-CcCC
Confidence 9999999996 89999999999999999999999999999 5 6764
No 14
>PRK06061 amidase; Provisional
Probab=100.00 E-value=2.3e-93 Score=776.64 Aligned_cols=440 Identities=25% Similarity=0.327 Sum_probs=364.2
Q ss_pred hhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhh
Q psy15609 68 ELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLD 147 (567)
Q Consensus 68 ~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D 147 (567)
+.-.+|+++|+++|++|++|++||+++||+|| +++|+.+||+++..+++|+++|+++|
T Consensus 14 ~~~~~s~~~l~~~l~~g~~s~~el~~~~l~ri----------------------~~~~~~lna~~~~~~~~al~~A~~~d 71 (483)
T PRK06061 14 NDRLPGLTDQAYQLASGAVTSVELVRRSLRRI----------------------EASQPTLNAFRVVRAEAALAEAAEAD 71 (483)
T ss_pred CcccCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCCcCCEEEEeChHHHHHHHHHHH
Confidence 45578999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCC
Q psy15609 148 KQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNM 227 (567)
Q Consensus 148 ~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~ 227 (567)
++++++. . +|||||||+|||+|+++|++||+||.... .++++||++|++||+||||++||||||||+++.++.|+
T Consensus 72 ~~~~~g~---~-~pL~GvPv~vKD~~~v~G~~tt~Gs~~~~-~~a~~dA~vV~~Lr~AGAii~GKTn~~Efa~~~~~~n~ 146 (483)
T PRK06061 72 RRRAAGD---R-LPLLGVPIAVKDDVDVAGVPTAFGTAGEV-PPATADSEVVRRLRAAGAVIVGKTNTCELGQWPFTSGP 146 (483)
T ss_pred HHHhcCC---C-CCcCCCeEEEEcccccCCceecCCCcccC-CCCCCCHHHHHHHHHCCCEEEEecCcchhccCCCCCCC
Confidence 9988773 3 59999999999999999999999998532 34479999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcce
Q psy15609 228 VFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVS 307 (567)
Q Consensus 228 ~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~ 307 (567)
+||+|+||||+.|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||+.|+.|.+ .++|+
T Consensus 147 ~~G~t~NP~~~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~G~vs~~g~~~~~----~~~d~ 222 (483)
T PRK06061 147 AFGHTRNPWSRDHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSVRIPAAWTHLVGIKPQRGRISTWPLPEAF----NGLTV 222 (483)
T ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHcCCCceEeecCCCCcchhchhhcCceeecCCCCccCCCCCCccc----ccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999988876 78999
Q ss_pred eccccCCHhhHHHHHHHhcCCcccCcCcccc-------cCCCCCcEEEEEcCCC-CCCCCCCCHHHHHHHHHHHHHhhhc
Q psy15609 308 AGPIVKHAEDILPFIKCLVIPEKLHQLKLDR-------THDLKQLKVFYVEQPG-DLKVSPVSGEMIGAIRKCVRALDEI 379 (567)
Q Consensus 308 ~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~-------~~~l~~lrIg~~~~~g-~~~~~~vd~~v~~a~~~av~~L~~~ 379 (567)
+|||||+|+|+++++++|+|+++.++..... ...++++||||+.+++ ..+...++++++++++++++.|++.
T Consensus 223 ~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~~~~~~~~~~~~~~lrig~~~~~~~~~~~~~~~p~v~~a~~~a~~~L~~~ 302 (483)
T PRK06061 223 NGPLARTVADAALLLDAASGNHPGDRHRPPPVTVSDAVGRAPGPLRIALSTRFPFTGFPAKLHPEIRAAVRRVAEQLALL 302 (483)
T ss_pred eCCEeCCHHHHHHHHHHHhCCCCCCCcccCCccchhhhccCCCCcEEEEECCccccccccCCCHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999987655432111 1235789999987543 0122468999999999999999995
Q ss_pred CCcEEEEecCccchHHHHHHHHHHHhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHHHHH--hCCChHHHH
Q psy15609 380 TEVSAEKLENIKQFKKSYALWRYWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMKLID--MHLPLPKDD 457 (567)
Q Consensus 380 lG~~V~ev~~lp~~~~~~~~~~~~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~l~~--~~~s~~~~~ 457 (567)
|++|+++ +++. ...... .+... . +.. +....+.. .......+.+...++ ..++..+|.
T Consensus 303 -G~~v~~~-~~~~-~~~~~~--~~~~~-~--~~~-----------~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~ 362 (483)
T PRK06061 303 -GHTVVPA-DPDY-GLRLGL--NFLPR-S--TAG-----------LRDWAERL-GDPVLLDPRTVSNARMGRLLSQAILR 362 (483)
T ss_pred -CCEEEEe-CCch-hhHHHH--HHHHH-H--HHH-----------HHHHHhhc-cChhhCCHHHHHHHHhcccCCHHHHH
Confidence 9999988 7432 111111 11110 0 000 00011110 011111133333333 568889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCcccc---C------CCCcchhHhhHhhCCCeEEEcCCCCCCCCc
Q psy15609 458 WAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFF---R------PYNFAYWAIFNVLGFPVVNVPVGLSKDGLP 528 (567)
Q Consensus 458 ~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~---~------~~~~~yT~l~NllGlPaisVP~G~~~~GLP 528 (567)
++++.|+++++.|.++|.++|+||+||+|.+||.+++... . .....||.+||++|+|+++||+|++.+|||
T Consensus 363 ~a~~~r~~~~~~~~~~~~~~D~ll~Pt~p~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~GlP 442 (483)
T PRK06061 363 LARAAEAAAQRRVGSIFDIVDVVLAPTTAQPPPRVGAFDRLGGWATDRAMIAACPYTWPWNVLGWPSINVPAGFTSDGLP 442 (483)
T ss_pred HHHHHHHHHHHHHHHHHhcCCEEEcCCCCCCCCCcccccccccchhhhhhhhcccccccccccCCCeEEEecCcCCCCCC
Confidence 9999999999999999999999999999999998875210 0 011348999999999999999999889999
Q ss_pred eEEEEEcCCCChHHHHHHHHHHHHhhcCCCCC
Q psy15609 529 LGVQIVATTNNDKLCIDVANYLEKQSVIGWKP 560 (567)
Q Consensus 529 vGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~ 560 (567)
+||||||++++|+.||++|++||++ .+|..
T Consensus 443 vGlQivg~~~~D~~LL~~A~~le~~--~~~~~ 472 (483)
T PRK06061 443 IGAQLMGPANSEPLLISLAAQLEAV--SGWAE 472 (483)
T ss_pred eeeEEECCCCCHHHHHHHHHHHHhh--cCccc
Confidence 9999999999999999999999999 57853
No 15
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species.
Probab=100.00 E-value=6.4e-94 Score=778.59 Aligned_cols=435 Identities=27% Similarity=0.391 Sum_probs=360.0
Q ss_pred HHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhhHHHHcCCCC
Q psy15609 77 VATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDKQIALDEID 156 (567)
Q Consensus 77 l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~~~~~~~~~ 156 (567)
|+++|++|++||+||+++|++|| +++|+.+|||++.++++|+++|+++|+++
T Consensus 1 l~~~~~~g~~s~~ev~~~~l~ri----------------------~~~~~~~na~~~~~~~~al~~A~~~d~~~------ 52 (460)
T TIGR00132 1 LRQLLKKKEISIKEVLEASLDRI----------------------EANKDKINAFLEVTVEKALKQAKKLDKAI------ 52 (460)
T ss_pred ChhHHhcCCCCHHHHHHHHHHHH----------------------HHhcccCCeEEEcCHHHHHHHHHHHHHhc------
Confidence 57899999999999999999999 99999999999999999999999999863
Q ss_pred CCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCCCCCCCCCC
Q psy15609 157 FSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVFGQTNNPY 236 (567)
Q Consensus 157 ~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~G~t~NP~ 236 (567)
. +|||||||+|||+|+++|++||+||..++++++.+||++|++||+||||++||||||||+++.++.|.+||+|+|||
T Consensus 53 -~-gpL~GvPv~vKD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~~L~~aGAii~GKTn~~E~a~~~~~~n~~~G~t~NP~ 130 (460)
T TIGR00132 53 -L-TPLAGIPIAVKDNISTKGIVTTCASKILENYIPPYDATVIERLKQAGALIIGKTNMDEFAMGSSTETSAFGPTKNPW 130 (460)
T ss_pred -c-CCcCCcEEEEecccccCCcccCcCChhhccCCCCCchHHHHHHHHCCCEEEEEechhHHhcCCCCCCCCCCCCCCCC
Confidence 2 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcceeccccCCHh
Q psy15609 237 NLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSAGPIVKHAE 316 (567)
Q Consensus 237 ~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~ 316 (567)
|+.|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||++|++|.+ +++|++|||||+|+
T Consensus 131 ~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSIRiPAa~cGv~G~KPT~G~vs~~G~~~~~----~~~d~~Gp~arsv~ 206 (460)
T TIGR00132 131 NLDRVPGGSSGGSAAAVAADLAPFSLGSDTGGSIRQPASFCGVVGFKPTYGRVSRYGLVAYA----SSLDQIGPFARTVE 206 (460)
T ss_pred CCCCCCCcCcHHHHHHHHcCCCCeEeecCCCCcchhhhHhcCceeECCCCCcCCCCCCcCcc----cCCCcccCeeCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999988 89999999999999
Q ss_pred hHHHHHHHhcCCcccCcCccccc---------CCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcEEEEe
Q psy15609 317 DILPFIKCLVIPEKLHQLKLDRT---------HDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSAEKL 387 (567)
Q Consensus 317 Dl~~ll~v~ag~~p~~~~~l~~~---------~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~V~ev 387 (567)
|+++++++|+|+++.|+.....+ .+++++||||..+.+ ..++++++++++++++.|+++ |++|+++
T Consensus 207 D~a~~~~~l~g~~~~d~~~~~~~~~~~~~~~~~~~~~lrig~~~~~~----~~~~~~v~~a~~~a~~~L~~~-G~~v~~~ 281 (460)
T TIGR00132 207 DIALLLDVISGHDKRDSTSAKVPDPEFFEELKKDLKGLKVGVVKEFS----EEMDKEVQEKFENALEVLEEL-GAEIVEV 281 (460)
T ss_pred HHHHHHHHHcCCCCCCCcccCCCccchhhhhhcccCCCEEEEECccc----ccCCHHHHHHHHHHHHHHHHC-CCEEEEe
Confidence 99999999999876555433211 136789999986542 237999999999999999996 9999999
Q ss_pred cCccchHHHHHHHHHHHhccCc-chhHHhhhc-c---cccchHHHHHHHHhCCCCCchHHHHH-HHH-h-----CCChHH
Q psy15609 388 ENIKQFKKSYALWRYWMTKEPG-NFARDLVNQ-E---GEASWWRETIKIFLGMSDHTLPAIMK-LID-M-----HLPLPK 455 (567)
Q Consensus 388 ~~lp~~~~~~~~~~~~~~~e~~-~~~~~l~~~-~---~~~~~~~el~k~~~~~s~~~~~~~~~-l~~-~-----~~s~~~ 455 (567)
++|.+.+....+...+..|.. .+..+.... . .....+.+.+.... .....+.+.. +.. . .+...+
T Consensus 282 -~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~ 358 (460)
T TIGR00132 282 -SFPHVKYALPIYYIISPSEASSNLARYDGIRYGYRIEEPNSLKELYAKTR--AEGFGEEVKRRIMLGNYALSAGYYDKY 358 (460)
T ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHhccccccccccccccccHHHHHhhcc--hhhcCHHHHHHHHccccccccchhhHH
Confidence 888776655554333322110 011110000 0 00111222222111 1111122222 211 1 223455
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCccccC----CCCcchhHhhHhhCCCeEEEcCCCCCCCCceEE
Q psy15609 456 DDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFFR----PYNFAYWAIFNVLGFPVVNVPVGLSKDGLPLGV 531 (567)
Q Consensus 456 ~~~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~~----~~~~~yT~l~NllGlPaisVP~G~~~~GLPvGv 531 (567)
|.++++.|+++++.+.++|.++|+||+||+|.+||.+++.... .....||.+||++|+|+++||+|++.+|+|+||
T Consensus 359 ~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~t~~~nl~g~PaisvP~g~~~~GlPvGl 438 (460)
T TIGR00132 359 YLKAQKVRTLIIDDFLKLFEEVDVIVSPTAPTLPFKIGEKLDDPLEMYLSDILTVPANLAGLPAISVPCGVKEKGLPIGL 438 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCCcccccCchHhhhcccceeccccccCCCcEEEecCcCCCCCCeeE
Confidence 8899999999999999999999999999999999998753211 112247999999999999999999889999999
Q ss_pred EEEcCCCChHHHHHHHHHHHHh
Q psy15609 532 QIVATTNNDKLCIDVANYLEKQ 553 (567)
Q Consensus 532 QvVg~~~~D~~lLavA~~lE~~ 553 (567)
||||++|+|+.||++|++||++
T Consensus 439 qlig~~~~D~~lL~~A~~le~~ 460 (460)
T TIGR00132 439 QIIGKCFDDKTLLQVSYAFEQA 460 (460)
T ss_pred EEECCCCchHHHHHHHHHHhhC
Confidence 9999999999999999999974
No 16
>PRK12470 amidase; Provisional
Probab=100.00 E-value=8.7e-93 Score=768.19 Aligned_cols=437 Identities=23% Similarity=0.350 Sum_probs=358.8
Q ss_pred hhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhhH
Q psy15609 69 LLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDK 148 (567)
Q Consensus 69 i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~ 148 (567)
+..+|+++|+++|++|++|++||+++||+|| ++.|+.+|||++..+++|+++|+++|+
T Consensus 6 ~~~~s~~~l~~~~~~g~~s~~e~~~~~l~ri----------------------~~~~~~lna~~~~~~~~a~~~A~~~d~ 63 (462)
T PRK12470 6 LAFAGAAAQARMLADGELTAPMLLEVYLQRI----------------------ERLDSHLRAYRVVLFDRARAEAEAAQQ 63 (462)
T ss_pred hhhCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHHCCCcCEEEEeCHHHHHHHHHHhHH
Confidence 5567999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCC
Q psy15609 149 QIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMV 228 (567)
Q Consensus 149 ~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~ 228 (567)
++++|. .. |||||||+|||+|+++|++||+||..+ ++++.+||++|++||+||||++||||||||+++..+.|.+
T Consensus 64 ~~~~g~---~~-pL~GvPi~vKD~~~v~G~~tt~Gs~~~-~~~~~~dA~vV~rLr~aGaii~GKTn~~Efa~~~~~~n~~ 138 (462)
T PRK12470 64 RLDAGE---RL-PLLGVPIAIKDDVDVAGEVTTYGSAGH-GPAATSDAEVVRRLRAAGAVIIGKTNVPELMIMPFTESLA 138 (462)
T ss_pred HHhcCC---CC-CcCCCeEEEecCcccCCceeCCCCccc-CCCCCccHHHHHHHHHCCCeEEEEeChHhHhcCCCCCCCC
Confidence 988873 45 999999999999999999999999985 5788999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCccee
Q psy15609 229 FGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSA 308 (567)
Q Consensus 229 ~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~ 308 (567)
||+|+||||+.|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||..|++|++ +++|++
T Consensus 139 ~G~t~NP~~~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~G~vs~~g~~~~~----~~ld~~ 214 (462)
T PRK12470 139 FGATRNPWDPNRTPGGSSGGSAAAVAAGLAPVALGSDGGGSIRIPSTWCGLFGLKPQRDRISLEPHDGAW----QGLSVN 214 (462)
T ss_pred CCCCCCCCCCCCCCCcchhHHHHHHHcCCCceEEecCCCCchhhchhhhCceeecCCCCCcCCCCCCCcc----cCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988 799999
Q ss_pred ccccCCHhhHHHHHHHhcCCcccCcCccc--ccCCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcEEEE
Q psy15609 309 GPIVKHAEDILPFIKCLVIPEKLHQLKLD--RTHDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSAEK 386 (567)
Q Consensus 309 GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~--~~~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~V~e 386 (567)
|||||+|+|+++++++|++.++.+ ..+. .....+++||||+.+....+...++++++++++++++.|++. |++|++
T Consensus 215 Gp~ar~v~D~a~~~~vl~~~~~~~-~~~~~~~~~~~~~lrig~~~~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~ 292 (462)
T PRK12470 215 GPIARSVMDAALLLDATTTVPGPE-GEFVAAAAREPGRLRIALSTRVPTPLPVRCGKQELAAVHQAGALLRDL-GHDVVV 292 (462)
T ss_pred CCeeCCHHHHHHHHHHhcCCCCCC-cchhhhhccCCCCCEEEEECCccccCCCCCCHHHHHHHHHHHHHHHhC-CCEEEE
Confidence 999999999999999999865222 1211 112457899999865320012568999999999999999995 999999
Q ss_pred ecCccchHHHHHHHHHHHhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHHHHH--hCCChHHHHHHHHHHH
Q psy15609 387 LENIKQFKKSYALWRYWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMKLID--MHLPLPKDDWAQEQTD 464 (567)
Q Consensus 387 v~~lp~~~~~~~~~~~~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~l~~--~~~s~~~~~~a~~~r~ 464 (567)
+ +++........|...+.. .+.... ..........+.+...+. ..++..+|.....++.
T Consensus 293 ~-~~~~~~~~~~~~~~~~~~---~~~~~~---------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 353 (462)
T PRK12470 293 R-DPDYPAATYANYLPRFFR---GISDDA---------------DAQAHPDRLEARTRAIARLGSFFSDRRMAALRAAEV 353 (462)
T ss_pred e-CCCchhHHHHHHHHHHHH---HHHHhh---------------ccccChhhcCHHHHHHHHhcccCCHHHHHHHHHHHH
Confidence 8 744211111111111000 000000 000000111122222222 5567777774444555
Q ss_pred HHHHHHHHHhcCCcEEEecCCCCCCCCCCccccC----C-----CCcchhHhhHhhCCCeEEEcCCCCCCCCceEEEEEc
Q psy15609 465 KLRKKLTDVLADDGVLIFPSCPCPATYHYTTFFR----P-----YNFAYWAIFNVLGFPVVNVPVGLSKDGLPLGVQIVA 535 (567)
Q Consensus 465 ~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~~----~-----~~~~yT~l~NllGlPaisVP~G~~~~GLPvGvQvVg 535 (567)
++++.|.++|+++|+||+||+|.+||++++.... . ....||.+||++|+|+++||+|++.+|||+|+||||
T Consensus 354 ~~~~~~~~~~~~~D~ll~Pt~p~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~~GlPvGlqlvg 433 (462)
T PRK12470 354 VLSARIQSIFDDVDVVVTPGTATGPSRIGAYQRRGAVSTLLLVVQRVPYFQVWNLTGQPAAVVPWDFDGDGLPMSVQLVG 433 (462)
T ss_pred HHHHHHHHHHhCCCEEeCCCCCCCCCCCCccCCCcchhhhhhhhhccCcCccchhcCCCeEEEecCcCCCCCceEEEEEC
Confidence 8999999999999999999999999988642110 0 123489999999999999999998899999999999
Q ss_pred CCCChHHHHHHHHHHHHhhcCCCC
Q psy15609 536 TTNNDKLCIDVANYLEKQSVIGWK 559 (567)
Q Consensus 536 ~~~~D~~lLavA~~lE~~~~~gw~ 559 (567)
++++|+.||++|++||++ .+|.
T Consensus 434 ~~~~D~~LL~~A~~le~~--~~~~ 455 (462)
T PRK12470 434 RPYDEATLLALAAQIESA--RPWA 455 (462)
T ss_pred CCCcHHHHHHHHHHHHcc--CCcc
Confidence 999999999999999999 5785
No 17
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed
Probab=100.00 E-value=1.3e-93 Score=776.05 Aligned_cols=434 Identities=26% Similarity=0.377 Sum_probs=359.9
Q ss_pred HHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhhHHHHcCCCCCCCC
Q psy15609 81 IKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDKQIALDEIDFSQK 160 (567)
Q Consensus 81 i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~~~~~~~~~~~~~ 160 (567)
|++|++||+||+++|++|| +++|+.+|||++.++++|+++|+++|+++++| . .+
T Consensus 1 i~~g~~t~~ev~~~~l~ri----------------------~~~~~~lna~~~~~~~~al~~A~~~d~~~~~g---~-~g 54 (459)
T PRK00012 1 LKNKEISAVELTQAYLDRI----------------------EEVDPKLNAFITVTEEEALAQAKAADAKLAAG---E-AG 54 (459)
T ss_pred CCCCcCCHHHHHHHHHHHH----------------------HHhcccCCeEEEeCHHHHHHHHHHHHHHHhcC---C-CC
Confidence 5789999999999999999 99999999999999999999999999998776 3 79
Q ss_pred CcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCCCCCCCCCCCCCC
Q psy15609 161 PFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVFGQTNNPYNLSR 240 (567)
Q Consensus 161 PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~G~t~NP~~~~r 240 (567)
|||||||+|||+|+++|++||+||..+++.++++||++|++||+||||++||||||||+++.++.|.+||+|+||||+.|
T Consensus 55 pL~GvPv~vKD~~~v~G~~tt~Gs~~~~~~~~~~da~vV~~Lr~aGAiilGkTn~~E~~~~~~~~n~~~G~t~NP~~~~~ 134 (459)
T PRK00012 55 PLAGIPIAIKDNICTKGIRTTCASKILENYVPPYDATVVEKLKAAGAVILGKTNMDEFAMGSSTENSAFGPTKNPWDLER 134 (459)
T ss_pred ccCCeEEEEecccccCCCccCccCHhhccCCCCcchHHHHHHHHCCCEEEeeccchhhhcCCCCCCCCCCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcceeccccCCHhhHHH
Q psy15609 241 TVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSAGPIVKHAEDILP 320 (567)
Q Consensus 241 ~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ 320 (567)
+||||||||||+||+|++++|+|||+|||||+||+||||||||||+|+||+.|++|.+ +++|++|||||+|+|+++
T Consensus 135 ~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~G~vp~~G~~~~~----~~~d~~Gp~arsv~D~a~ 210 (459)
T PRK00012 135 VPGGSSGGSAAAVAAGLAPAALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRYGLIAFA----SSLDQIGPFARTVEDAAL 210 (459)
T ss_pred CCCCCcHHHHHHHHcCCCceEEeeCCCCccchhHHHcCceeecCCCCcccCCCCcCcc----cCCCcccCccCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988 789999999999999999
Q ss_pred HHHHhcCCcccCcCccccc---------CCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCcc
Q psy15609 321 FIKCLVIPEKLHQLKLDRT---------HDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSAEKLENIK 391 (567)
Q Consensus 321 ll~v~ag~~p~~~~~l~~~---------~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~V~ev~~lp 391 (567)
++++|+|+++.|+.....+ .+++++|||++.+. +...++++++++++++++.|+++ |++|+++ ++|
T Consensus 211 ~~~~l~g~d~~d~~~~~~~~~~~~~~~~~~~~~lrig~~~~~---~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~-~~~ 285 (459)
T PRK00012 211 LLNAIAGHDPKDSTSADVPVPDYTAALGKDIKGLKIGVPKEY---FGEGLDPEVKEAVEAAIKKLEDL-GAEIVEV-SLP 285 (459)
T ss_pred HHHHHhCCCCCCcccccCCCCchhhhhcccccccEEEEEccc---ccccCCHHHHHHHHHHHHHHHHC-CCEEEEe-CCC
Confidence 9999999876554433111 13688999998653 23568999999999999999995 9999999 888
Q ss_pred chHHHHHHHHHHHhccCc-chhHHhhh-cc---cccchHHHHHHHHhCCCCCchHHHHH-HHH-h-----CCChHHHHHH
Q psy15609 392 QFKKSYALWRYWMTKEPG-NFARDLVN-QE---GEASWWRETIKIFLGMSDHTLPAIMK-LID-M-----HLPLPKDDWA 459 (567)
Q Consensus 392 ~~~~~~~~~~~~~~~e~~-~~~~~l~~-~~---~~~~~~~el~k~~~~~s~~~~~~~~~-l~~-~-----~~s~~~~~~a 459 (567)
.+.+....+...+..|.. .+..+... .. .....+.+.+.+.. .....+.+.. +.. . .+....|.++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a 363 (459)
T PRK00012 286 HTKYALPAYYIIAPAEASSNLARYDGVRYGYRAEDAKDLEEMYEKTR--SEGFGEEVKRRIMLGTYVLSAGYYDAYYLKA 363 (459)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcccccccccccccccHHHHHhhhh--hhccCHHHHHHHHhCcchhccccchHHHHHH
Confidence 766555444333322110 11111100 00 01122333332211 1111133333 221 1 2233568889
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCccc----cCCCCcchhHhhHhhCCCeEEEcCCCCCCCCceEEEEEc
Q psy15609 460 QEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTF----FRPYNFAYWAIFNVLGFPVVNVPVGLSKDGLPLGVQIVA 535 (567)
Q Consensus 460 ~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~----~~~~~~~yT~l~NllGlPaisVP~G~~~~GLPvGvQvVg 535 (567)
++.|++++++|.++|.++|+||+|++|.+||.|+... .......||.+||++|+|+++||+|++.+|+|+||||||
T Consensus 364 ~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~t~~~n~~G~PaisvP~g~~~~glPvGlqlvg 443 (459)
T PRK00012 364 QKVRTLIKQDFEKAFEKVDVILGPTAPTTAFKIGEKTDDPLAMYLSDIFTVPANLAGLPAISVPAGFDDGGLPVGLQLIG 443 (459)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEeCCCCCCCcccccccCchHhhhccccccccccccCCCcEEEecCCCCCCCCEEEEEEC
Confidence 9999999999999999999999999999999986421 111223489999999999999999998889999999999
Q ss_pred CCCChHHHHHHHHHHH
Q psy15609 536 TTNNDKLCIDVANYLE 551 (567)
Q Consensus 536 ~~~~D~~lLavA~~lE 551 (567)
++++|++||++|++||
T Consensus 444 ~~~~D~~LL~~a~~~E 459 (459)
T PRK00012 444 KYFDEETLLNVAYAFE 459 (459)
T ss_pred CCCchHHHHHHHHHhC
Confidence 9999999999999987
No 18
>PRK07869 amidase; Provisional
Probab=100.00 E-value=5.6e-93 Score=772.35 Aligned_cols=438 Identities=23% Similarity=0.287 Sum_probs=357.6
Q ss_pred hhhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHh
Q psy15609 67 NELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLL 146 (567)
Q Consensus 67 ~~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~ 146 (567)
+++..+|+++|+++|++|++|++||+++|++|| +++|+.+|||++.++++|+++|+++
T Consensus 10 ~~~~~~~~~~l~~~~~~g~~s~~el~~~~l~ri----------------------~~~~~~lna~~~~~~e~a~~~A~~~ 67 (468)
T PRK07869 10 DALGDLDAVGLAEAIRAGRVSAAEVVEAAIARA----------------------EAVNPALNALAYAAFDRARDRAARP 67 (468)
T ss_pred hhhhcCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCCCcCEEEEcCHHHHHHHHHhc
Confidence 456778999999999999999999999999999 9999999999999999999999998
Q ss_pred hHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCC
Q psy15609 147 DKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRN 226 (567)
Q Consensus 147 D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n 226 (567)
|. ..+|||||||+|||+|+++|++||+||..++++++.+||++|++||+||||++||||||||+++.++.|
T Consensus 68 d~---------~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~~~n 138 (468)
T PRK07869 68 GS---------QGGFFSGVPTFIKDNVDVAGLPTMHGSDAWTPRPAKADSDFARQFLATGLISLGKTQLPEFGFSASTEH 138 (468)
T ss_pred CC---------CCCCcCCCeEEEecCcccCCcccCcccHhhcCCCCCCcHHHHHHHHHCCCEEEEecCchHhhcCCCCCC
Confidence 72 358999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcc
Q psy15609 227 MVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMV 306 (567)
Q Consensus 227 ~~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~ 306 (567)
.+||+|+||||++|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||..|+.|... .++|
T Consensus 139 ~~~G~t~NP~d~~~~pGGSSgGsAaAVAaG~~~~alGTDtgGSiRiPAa~cGvvG~KPT~G~vs~~g~~~~~~---~~~d 215 (468)
T PRK07869 139 PRLGPVRNPWNTDYSAGASSGGSAALVAAGVVPIAHANDGGGSIRIPAACCGLVGLKPSRGRLPLDPELRRLP---VNIV 215 (468)
T ss_pred CCCCCcCCCCCCCCCCCCCchHHHHHHHcCCCceeeecCCCCccccchhhcCeeeecCCCCcccCCCCcccCc---cccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999876431 4679
Q ss_pred eeccccCCHhhHHHHHHHhcCCcccCcCcc---cccCCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcE
Q psy15609 307 SAGPIVKHAEDILPFIKCLVIPEKLHQLKL---DRTHDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVS 383 (567)
Q Consensus 307 ~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l---~~~~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~ 383 (567)
++|||||+|+|+++++++|+|.++.+..+. ....+++++||||+.+++ ....++++++++++++++.|++. |++
T Consensus 216 ~~Gp~arsv~D~a~l~~v~~g~~~~~~~~~~~~~~~~~~~~lrigv~~~~~--~~~~~~p~v~~a~~~a~~~L~~~-G~~ 292 (468)
T PRK07869 216 ANGVLTRTVRDTAAFYREAERYYRNPKLPPIGDVTGPGKQRLRIAVVTDSV--TGREADPEVREAVLATARLLEEL-GHR 292 (468)
T ss_pred eecCeeCcHHHHHHHHHHHhccCccCCCCchhhhcccCCCCCEEEEECCcc--CCCCCCHHHHHHHHHHHHHHHHC-CCE
Confidence 999999999999999999999764322111 001136889999986543 22578999999999999999995 999
Q ss_pred EEEecCccchHHHHH---HHHHHHhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHH-HHH--hCCChHHHH
Q psy15609 384 AEKLENIKQFKKSYA---LWRYWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMK-LID--MHLPLPKDD 457 (567)
Q Consensus 384 V~ev~~lp~~~~~~~---~~~~~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~-l~~--~~~s~~~~~ 457 (567)
|+++ ++|...+... .+...... .+.... .+.... .........+.. +.. .. +..+|.
T Consensus 293 v~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~ 355 (468)
T PRK07869 293 VEPV-DLPVPASFVDDFLLYWGFLAF---ALVRGG----------RRTFGP--SFDRTRLDNLTLGLARHARR-NLHRLP 355 (468)
T ss_pred EEEe-CCCchHHHHHHHHHHHHHHHH---HHHhhh----------hhhccc--ccCHHHhhHHHHHHHHHHhh-hHHHHH
Confidence 9999 8775322221 11111110 000000 000000 000000011111 111 12 345678
Q ss_pred HHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCccccC---------C-CCcchhHhhHhhCCCeEEEcCCCCCCCC
Q psy15609 458 WAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFFR---------P-YNFAYWAIFNVLGFPVVNVPVGLSKDGL 527 (567)
Q Consensus 458 ~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~~---------~-~~~~yT~l~NllGlPaisVP~G~~~~GL 527 (567)
++++.++++++.+.++|+++|+||+||+|.+||.+++.... . ....||.+||++|+|+++||+|++.+||
T Consensus 356 ~a~~~~~~~~~~~~~~~~~~Dvll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~~Gl 435 (468)
T PRK07869 356 LAIARLRRLRRVYARFFGTYDVVLTPTLAHTTPEIGYLDPTQDFDTVLDRLISYVAFTPLQNATGEPAISLPLGQSSDGL 435 (468)
T ss_pred HHHHHHHHHHHHHHHHHhcCCEEecCCCCCCCCCCCccCccccchhhhHHHhcccccCccccccCCCceeeecCcCCCCC
Confidence 88889999999999999999999999999999988642110 0 1224799999999999999999988999
Q ss_pred ceEEEEEcCCCChHHHHHHHHHHHHhhcCCCCC
Q psy15609 528 PLGVQIVATTNNDKLCIDVANYLEKQSVIGWKP 560 (567)
Q Consensus 528 PvGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~ 560 (567)
|+||||||++++|+.||++|++||+. .+|..
T Consensus 436 PvGlQivg~~~~D~~lL~~A~~le~~--~~~~~ 466 (468)
T PRK07869 436 PVGMMFSADVGDEATLLELAYELEEA--QPWPR 466 (468)
T ss_pred CeeEEEecCCCchHHHHHHHHHHHhc--CCCcc
Confidence 99999999999999999999999998 56753
No 19
>PRK06529 amidase; Provisional
Probab=100.00 E-value=1.6e-92 Score=770.90 Aligned_cols=429 Identities=26% Similarity=0.348 Sum_probs=356.6
Q ss_pred ccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhhHHH
Q psy15609 71 LQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDKQI 150 (567)
Q Consensus 71 ~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~~~ 150 (567)
.+|+++|+++|++|++|++||+++||+|| +++|+.+|||++.++++|+++|+++|+.
T Consensus 3 ~~~~~~l~~~~~~g~~s~~e~~~~~l~ri----------------------~~~~~~lna~~~~~~e~al~~A~~~d~~- 59 (482)
T PRK06529 3 YKDATAMAQAVQQGQVTPLELVTQAIYKA----------------------KKLNPTLNAIVSERYEEALEEAKQRDFS- 59 (482)
T ss_pred cCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHHCCcccEEEecChHHHHHHHHhcccc-
Confidence 57899999999999999999999999999 9999999999999999999999999852
Q ss_pred HcCCCCCCCCCcccceEEeecC-cCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCCC
Q psy15609 151 ALDEIDFSQKPFLGVPFTSKNS-TASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVF 229 (567)
Q Consensus 151 ~~~~~~~~~~PL~GvPi~vKD~-~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~ 229 (567)
.+|||||||+|||+ |+++|++||+||..++++++.+||++|++||+||||++||||||||+++.++.|++|
T Consensus 60 --------~~PL~GvPi~vKD~~~~v~G~~tt~Gs~~~~~~~~~~Da~vV~rLr~AGAiilGKTn~~E~~~~~~~~n~~~ 131 (482)
T PRK06529 60 --------GKPFAGVPIFLKDLGQELKGQLSTSGSRLFKNYQATKTDLYVKRLEDLGFIILGRSNTPEFGFKNISDSSLH 131 (482)
T ss_pred --------CCCcCCCeEEEecCCcccCCCccCcchHHhcCCCCCcchHHHHHHHHCCCeEEEecCchHhhcCCCCCCcCC
Confidence 15999999999998 799999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCccee-
Q psy15609 230 GQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSA- 308 (567)
Q Consensus 230 G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~- 308 (567)
|+|+||||+.|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||..+..+.+ .+.+++
T Consensus 132 G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~aiGtDtgGSIRiPAa~cGvvGlKPT~Grvp~~~~~~~~----~~~~~~~ 207 (482)
T PRK06529 132 GPVNLPFDNSRNAGGSSGGAAALVSSGIVALAAASDGGGSIRIPASFNGLIGLKPSRGRIPVGPGSYRG----WQGASVH 207 (482)
T ss_pred CCCCCCCCCCCCCCcCcHHHHHHHHcCCCceeeecCCCCCeecChHhhCceeEccCCCccCCCCCCccc----ccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999986654433 345544
Q ss_pred ccccCCHhhHHHHHHHhcCCcccCcCccccc-------CCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCC
Q psy15609 309 GPIVKHAEDILPFIKCLVIPEKLHQLKLDRT-------HDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITE 381 (567)
Q Consensus 309 GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~-------~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG 381 (567)
|||||+|+|+++++++|+|+++.++.++... ..++++||||+.+++ ....++++++++++++++.|+++ |
T Consensus 208 Gpiarsv~D~a~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~lrIg~~~~~~--~~~~~~p~v~~a~~~a~~~L~~~-G 284 (482)
T PRK06529 208 FALTKSVRDTRRLLYYLQMYQMESPFPLATLSKESLFQSLQRPLKIAFYQRSP--DGSPVSLDAAKALKQAVTFLREQ-G 284 (482)
T ss_pred CCccCcHHHHHHHHHHhhCCCCCCCcccCCcccchhccccCCCCEEEEECCCC--CCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 8999999999999999999875555443210 124789999997643 23578999999999999999995 9
Q ss_pred cEEEEecC-cc-chHHHHHHHHHHHhccCcc-hhHHhhhcccccchHHHHHHHHhCCC--CCch-HHHHHHHH--hCCCh
Q psy15609 382 VSAEKLEN-IK-QFKKSYALWRYWMTKEPGN-FARDLVNQEGEASWWRETIKIFLGMS--DHTL-PAIMKLID--MHLPL 453 (567)
Q Consensus 382 ~~V~ev~~-lp-~~~~~~~~~~~~~~~e~~~-~~~~l~~~~~~~~~~~el~k~~~~~s--~~~~-~~~~~l~~--~~~s~ 453 (567)
++|+++ + +| .+.+....+......|... +..+ ....+.. ...+ +....++. ..++.
T Consensus 285 ~~v~ev-~~~p~~~~~~~~~~~~~~~~e~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 348 (482)
T PRK06529 285 HEVVEL-EEFPLDMTEVMRSYYIMNSVETAAMFDDI---------------EDALGRPMTKDDMETMTWAIYQSGQDIPA 348 (482)
T ss_pred CEEEEc-CCCCCCHHHHHHHHHHHHHHHHHHHHHHH---------------HHhcCCCCChhhcCHHHHHHHHHhhcCCH
Confidence 999998 7 35 3444444443333221110 1110 0001110 0001 11111222 56788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCccccC-----------------------------CCCcch
Q psy15609 454 PKDDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFFR-----------------------------PYNFAY 504 (567)
Q Consensus 454 ~~~~~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~~-----------------------------~~~~~y 504 (567)
.+|.++++.|+.+++.|.++|.++|+||+||+|++||.+++.... .....|
T Consensus 349 ~~~~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (482)
T PRK06529 349 KRYSQVLQKWDTYSATMASFHETYDLLLTFTTNTPAPKHGQLDPDSKLMANLAQAEIFSSEEQQNLVETMFEKSLAITPY 428 (482)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCCccCcccchhhhccccccccchhhhhhhhhhhhhhhhcccc
Confidence 999999999999999999999999999999999999988641100 011248
Q ss_pred hHhhHhhCCCeEEEcCCCCCCCCceEEEEEcCCCChHHHHHHHHHHHHh
Q psy15609 505 WAIFNVLGFPVVNVPVGLSKDGLPLGVQIVATTNNDKLCIDVANYLEKQ 553 (567)
Q Consensus 505 T~l~NllGlPaisVP~G~~~~GLPvGvQvVg~~~~D~~lLavA~~lE~~ 553 (567)
|.+||++|+|+++||+|++.+|||+||||||++++|+.||++|++||++
T Consensus 429 t~~~Nl~G~PaisvP~g~~~~GlPvGlQlvg~~~~D~~lL~~a~~le~~ 477 (482)
T PRK06529 429 TALANLTGQPAISLPTYETKEGLPMGVQLIAAKGREDLLLGIAEQFEAA 477 (482)
T ss_pred cccccccCCCeEEeecCcCCCCCceeEEEecCCCcHHHHHHHHHHHHhc
Confidence 9999999999999999998899999999999999999999999999987
No 20
>PRK08186 allophanate hydrolase; Provisional
Probab=100.00 E-value=1e-90 Score=768.33 Aligned_cols=432 Identities=21% Similarity=0.267 Sum_probs=361.6
Q ss_pred ccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCCh-HHHHHHHHHhhHH
Q psy15609 71 LQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRF-SEALEEAKLLDKQ 149 (567)
Q Consensus 71 ~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~-~~Al~~A~~~D~~ 149 (567)
.+|+.+|+++|++|++|++||+++|++|| ++ |+.+|+++.... ++|+++|+++|++
T Consensus 6 ~~t~~~l~~~~~~g~~t~~evv~a~l~ri----------------------~~-~~~~~a~i~~~~~~~a~~~A~~ld~~ 62 (600)
T PRK08186 6 DLTLASLRAAYRAGTLTPRAVVAALYARI----------------------AA-VDDPEVWIHLRPEADLLAQAAALEAR 62 (600)
T ss_pred cCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------Hh-cCCCCEEEEeCchHHHHHHHHHHhhh
Confidence 45899999999999999999999999999 77 678999999876 6899999999987
Q ss_pred HHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCCC
Q psy15609 150 IALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVF 229 (567)
Q Consensus 150 ~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~ 229 (567)
++ ..+|||||||+|||||+++|++||+||..+. +++++||++|++||+||||++||||||||+++.++.|+.|
T Consensus 63 ~~------~~gPL~GVP~aVKDnidvaG~pTTaGs~~~~-~~p~~DA~vV~rLr~AGAIilGKTN~~Efa~g~~g~n~~y 135 (600)
T PRK08186 63 DP------AALPLYGVPFAVKDNIDVAGLPTTAACPAFA-YTPERDATVVARLRAAGAIVIGKTNLDQFATGLVGTRSPY 135 (600)
T ss_pred cc------ccCCCCCCeEEeecceecCCcccCcCCHhHc-CCCCcChHHHHHHHHCCCEEEeeecchhhhcCCCCCCCCC
Confidence 53 3589999999999999999999999999886 6889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcceec
Q psy15609 230 GQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSAG 309 (567)
Q Consensus 230 G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~G 309 (567)
|+|+||||++|++||||||||++||+|+++||+|||||||||+||+||||||||||+|+||+.|++|.+ .++|++|
T Consensus 136 G~t~NP~~~~~~~GGSSsGSAaAVAaG~~~~alGTDtgGSiRiPAa~cGlvGlKPT~G~vs~~Gv~p~~----~slD~vG 211 (600)
T PRK08186 136 GAVRNAFDPEYVSGGSSSGSAVAVALGLVSFALGTDTAGSGRVPAAFNNIVGLKPTLGLLSTRGVVPAC----RTLDCVS 211 (600)
T ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHcCCcceEeeecCCCcchhhhHHhCceEEeCCCCcccCCCccccc----ccCCcee
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred cccCCHhhHHHHHHHhcCCcccCcCccccc-----CCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcEE
Q psy15609 310 PIVKHAEDILPFIKCLVIPEKLHQLKLDRT-----HDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSA 384 (567)
Q Consensus 310 pmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~-----~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~V 384 (567)
||+|+++|+++++++|+|.|+.|+.....+ ...+++|||++.++. +....+++++++++++++.|++. |++|
T Consensus 212 p~Arsv~D~~~~l~vl~g~d~~D~~s~~~p~~~~~~~~~~lrIgv~~~~~--~~~~~~~~v~~a~~~a~~~L~~~-G~~v 288 (600)
T PRK08186 212 VFALTVDDADAVLAVMAGFDPADPYSRANPADAPAALPAGPRVGVPRAAQ--LEFFGDAEAEAAFAAALARLEAL-GAEL 288 (600)
T ss_pred cccCCHHHHHHHHHHhcCCCCCCcccccCCcccccccCCCCEEEEEcchh--ccccCCHHHHHHHHHHHHHHHHc-CCeE
Confidence 999999999999999999887666544322 135789999985432 11225899999999999999996 9999
Q ss_pred EEecCccchHHHHHH-HHHHHhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHHHHH--hCCChHHHHHHHH
Q psy15609 385 EKLENIKQFKKSYAL-WRYWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMKLID--MHLPLPKDDWAQE 461 (567)
Q Consensus 385 ~ev~~lp~~~~~~~~-~~~~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~l~~--~~~s~~~~~~a~~ 461 (567)
+++ ++|.+.+.... +...+..|. + ..+.+++. ...+...+.+..++. ..++..+|.+++.
T Consensus 289 ~ei-~~~~~~~~~~~~~~~~~~ae~--~-----------~~~~~~~~---~~~~~~~p~~~~~i~~g~~~sa~~~~~a~~ 351 (600)
T PRK08186 289 VEI-DFSPFLEAARLLYEGPWVAER--Y-----------AAVGEFLE---AHPDAVDPVVRGIIAGAAAFSAADAFRALY 351 (600)
T ss_pred EEe-cchhHHHHHHHHHHHHHHHHH--H-----------HHHHHHHh---hChhhcCHHHHHHHHhCcCCCHHHHHHHHH
Confidence 999 88766443322 211111100 0 01111111 111111233333333 6788999999999
Q ss_pred HHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCc---ccc-CCCCcchhHhhHhhCCCeEEEcCCCCCCCCceEEEEEcCC
Q psy15609 462 QTDKLRKKLTDVLADDGVLIFPSCPCPATYHYT---TFF-RPYNFAYWAIFNVLGFPVVNVPVGLSKDGLPLGVQIVATT 537 (567)
Q Consensus 462 ~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~---~~~-~~~~~~yT~l~NllGlPaisVP~G~~~~GLPvGvQvVg~~ 537 (567)
.|+.+++.++++|+++|+||+||+|.+++.+.. +.. ......||.+||++|+|+++||+|+..+|||+||||||++
T Consensus 352 ~r~~l~~~~~~~~~~~D~Ll~Pt~p~~~~~~~~~~~~~~~~~~~~~yT~~~Nl~glPAisvP~g~~~~GlPvGvqlig~~ 431 (600)
T PRK08186 352 RLAELRRAAEAVLAGIDALLVPTAPTHPTIAEVAADPIGLNSRLGTYTNFVNLLDLCALAVPAGFRADGLPFGVTLIAPA 431 (600)
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCCCCCCCchhhcCCchhhhhhhhhccccccccCCCeEEEecccCCCCCCeeEEEEcCC
Confidence 999999999999999999999999998753321 111 1111248999999999999999999889999999999999
Q ss_pred CChHHHHHHHHHHHHhhcCCC
Q psy15609 538 NNDKLCIDVANYLEKQSVIGW 558 (567)
Q Consensus 538 ~~D~~lLavA~~lE~~~~~gw 558 (567)
|+|+.||++|++||+. + +|
T Consensus 432 ~~D~~LL~~A~~le~~-~-~~ 450 (600)
T PRK08186 432 FADQALADLAARLQAA-L-AL 450 (600)
T ss_pred CCHHHHHHHHHHHHhh-c-cc
Confidence 9999999999999998 5 55
No 21
>PRK05962 amidase; Validated
Probab=100.00 E-value=1.7e-90 Score=743.07 Aligned_cols=400 Identities=20% Similarity=0.234 Sum_probs=337.4
Q ss_pred HHHcCcccEEEeCChHHHHHHHHHhhHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCC-CCcHHHHH
Q psy15609 122 EQVNSKINSVVDNRFSEALEEAKLLDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKG-TEDAYIVE 200 (567)
Q Consensus 122 ~~~n~~lna~v~~~~~~Al~~A~~~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a-~~da~~V~ 200 (567)
+++|+.+|||++..+++|+++|+++|+++++| +..+|||||||+|||+|+++|++||+||..+++.++ .+||++|+
T Consensus 9 ~~~~~~lna~~~~~~~~al~~A~~~d~~~~~g---~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~~dA~vV~ 85 (424)
T PRK05962 9 AARAGEEHVFSKLYAERARAEADAADARRRAG---RSLGPLDGRIVSIKDLFDVAGEPTLAGSVIRRDAPPAGADALIVQ 85 (424)
T ss_pred HhhCCcccEEEEECHHHHHHHHHHHHHHHHcC---CCCCCCCCCEEEEEeeeecCCcccCCCChhhhcCCCCcCChHHHH
Confidence 99999999999999999999999999998877 367999999999999999999999999999999888 69999999
Q ss_pred HHHHCCCeEEEEcCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCce
Q psy15609 201 RLKSAGAILLGVTNVPELCLWSETRNMVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVY 280 (567)
Q Consensus 201 ~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~ 280 (567)
+||+||||++||||||||+++.++.|.+||+|+||||+.|+||||||||||+||+|++++|+|||||||||+||+|||||
T Consensus 86 rL~~aGAiilGKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRiPAa~cGv~ 165 (424)
T PRK05962 86 RLRNAGAVIIGKTHMTEFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNGLV 165 (424)
T ss_pred HHHHCCCEEEEecCchHHhcCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceEEeeCCCCcchhhhHhhCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCCcCCCCCCCCCCCCCCcceeccccCCHhhHHHHHHHhcCCcccCcCcccccCCCCCcEEEEEcCCCCCCCCC
Q psy15609 281 GYKLTTGFINTKGMGFRSGKEARTMVSAGPIVKHAEDILPFIKCLVIPEKLHQLKLDRTHDLKQLKVFYVEQPGDLKVSP 360 (567)
Q Consensus 281 G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~~~l~~lrIg~~~~~g~~~~~~ 360 (567)
|||||+|+||+.|++|++ +++|++|||||+++|+++++++|+|+++.+.. ...++++|||+..+++ ...
T Consensus 166 GlKPT~G~v~~~G~~~~~----~s~d~~Gp~arsv~D~~~~~~vl~g~~~~~~~----~~~~~~lrig~~~~~~---~~~ 234 (424)
T PRK05962 166 GFKPTARRIPLEGAFPLS----PSLDSIGPLARTVADCAAADAVMAGEKPIPLE----VLPVAGLRIGLPKGYL---LAD 234 (424)
T ss_pred eeecCCCceeCCCcccCc----cccCccccccCCHHHHHHHHHHHcCCCCCccc----ccCcCCcEEEEEcccc---ccc
Confidence 999999999999999988 79999999999999999999999998743321 2246789999987543 456
Q ss_pred CCHHHHHHHHHHHHHhhhcCCcEEEEecCccchHHHHHHHHH--HHhccCcchhHHhhhcccccchHHHHHHHHhCCCCC
Q psy15609 361 VSGEMIGAIRKCVRALDEITEVSAEKLENIKQFKKSYALWRY--WMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDH 438 (567)
Q Consensus 361 vd~~v~~a~~~av~~L~~~lG~~V~ev~~lp~~~~~~~~~~~--~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~ 438 (567)
++++++++++++++.|+++ |++|+++ ++|.+.+.+..+.. .+.. . +.... +. .+.......
T Consensus 235 ~~~~v~~a~~~a~~~L~~~-G~~v~~~-~~~~~~~~~~~~~~~~~~~~-~-e~~~~----------~~---~~~~~~~~~ 297 (424)
T PRK05962 235 MEPDVAAAFEASLAALEKA-GARIADL-AIDDLIARLAEATRIGSIAG-I-EASHI----------HA---DWLADLDAN 297 (424)
T ss_pred CCHHHHHHHHHHHHHHHHC-CCEEEEe-ccchHHHHHHHHHHHhHHHH-H-HHHHH----------HH---HHHhhchhh
Confidence 8999999999999999996 9999999 87764332222211 0110 0 00000 00 011111111
Q ss_pred chHHHHHHH-H-hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCccccCC--C------CcchhHhh
Q psy15609 439 TLPAIMKLI-D-MHLPLPKDDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFFRP--Y------NFAYWAIF 508 (567)
Q Consensus 439 ~~~~~~~l~-~-~~~s~~~~~~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~~~--~------~~~yT~l~ 508 (567)
..+.+...+ . ..++..+|.++++.|..+++.|.++|.++|+||+||+|.++|+++...... + .+.||.+|
T Consensus 298 ~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~t~~~ 377 (424)
T PRK05962 298 VDIRVKRPLSRRIKVPLEAYHRLMRTRAALARAMDERLAGFDMFALPATPIVAPTIASVSEDEEEYDRVENLLLRNTQVA 377 (424)
T ss_pred CCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCCCCccccccchHHHHHHHHHHHhhCcCc
Confidence 223333322 2 568889999999999999999999999999999999999999886522111 1 12489999
Q ss_pred HhhCCCeEEEcCCCCCCCCceEEEEEcCCCChHHHHHHHHHHHHhhc
Q psy15609 509 NVLGFPVVNVPVGLSKDGLPLGVQIVATTNNDKLCIDVANYLEKQSV 555 (567)
Q Consensus 509 NllGlPaisVP~G~~~~GLPvGvQvVg~~~~D~~lLavA~~lE~~~~ 555 (567)
|++|+|+++||+|. +|||+||||||++++|+.||++|++||+. +
T Consensus 378 n~~G~Pa~svP~g~--~glPvGlqlvg~~~~D~~lL~~a~~le~~-l 421 (424)
T PRK05962 378 NQFDLCSITLPMPG--MALPAGLMLTARNGSDRRLLAAAASVEKL-L 421 (424)
T ss_pred cccCCCeEEEECCC--CCCCEEEEEECCCCCHHHHHHHHHHHHHH-h
Confidence 99999999999984 69999999999999999999999999998 5
No 22
>PRK06828 amidase; Provisional
Probab=100.00 E-value=8.8e-90 Score=746.10 Aligned_cols=439 Identities=21% Similarity=0.287 Sum_probs=359.0
Q ss_pred ccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHc---CcccEEEeCChHHHHHHHHHhh
Q psy15609 71 LQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVN---SKINSVVDNRFSEALEEAKLLD 147 (567)
Q Consensus 71 ~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n---~~lna~v~~~~~~Al~~A~~~D 147 (567)
.+++.+|+++|++|++||+||+++||+|| +++| +.+|||++.+.+ |+++|+++|
T Consensus 12 ~~~~~~l~~~l~~g~~t~~el~~~~l~ri----------------------~~~~~~~~~lna~~~~~~~-al~~A~~~d 68 (491)
T PRK06828 12 ELTIHDIQTAMEDGKLTSKELVMYYLHRI----------------------AKYDQDGPKINSILEINPD-AIFIAEALD 68 (491)
T ss_pred cCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCCCCCeeEEEEecCHH-HHHHHHHHH
Confidence 45899999999999999999999999999 8899 589999998865 899999999
Q ss_pred HHHHcCCCCCCCCCcccceEEeecCcCCCC-CcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccC-----
Q psy15609 148 KQIALDEIDFSQKPFLGVPFTSKNSTASKG-LNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLW----- 221 (567)
Q Consensus 148 ~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G-~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~----- 221 (567)
++++.| ...+|||||||+|||+|+++| ++||+||..+.++++.+||++|++||+||||++||||||||+++
T Consensus 69 ~~~~~g---~~~gpL~GvPv~vKD~~~v~gg~~tt~Gs~~~~~~~~~~da~vV~~Lr~aGaii~GKTn~~Efa~~~~~~~ 145 (491)
T PRK06828 69 HERKIK---GVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQHISSEDAFLVTKLREAGAVILGKANMTELANFMSFEM 145 (491)
T ss_pred HHHhcC---CCCCCccCceeeeeeeEEecCCCcCCcCcHHHcCCCCCCChHHHHHHHHCCCEEEeecChHHHhhccCCCC
Confidence 998877 367999999999999999996 99999999999999999999999999999999999999999964
Q ss_pred CCCCCCCCCCCCCCCCC---CCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCC
Q psy15609 222 SETRNMVFGQTNNPYNL---SRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRS 298 (567)
Q Consensus 222 ~~~~n~~~G~t~NP~~~---~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~ 298 (567)
..+.|.+||+|+||||+ .|+|||||||||++||+|++++|+|||||||||+||+||||||||||+|+||+.|++|++
T Consensus 146 ~~g~n~~~G~t~NP~d~~~~~r~pGGSSgGsAaaVAag~~~~aiGtDtgGSiRiPAa~cGvvGlKPT~G~vs~~G~~p~~ 225 (491)
T PRK06828 146 WAGYSARGGQTINPYGTGEDDMFVGGSSTGSAIAVAANFTVVSVGTETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFT 225 (491)
T ss_pred CCCcCCCCCCcCCCCCCccCCcCCCcCchHHHHHHHcCCCceEeecCCCCccccchhhcCceeecCCCCCccCCCCCCCc
Confidence 58889999999999999 689999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcceeccccCCHhhHHHHHHHhcCCcccCcCcccc------c-------CCCCCcEEEEEcCCCCCCCCCCCHHH
Q psy15609 299 GKEARTMVSAGPIVKHAEDILPFIKCLVIPEKLHQLKLDR------T-------HDLKQLKVFYVEQPGDLKVSPVSGEM 365 (567)
Q Consensus 299 ~~~~~~~~~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~------~-------~~l~~lrIg~~~~~g~~~~~~vd~~v 365 (567)
.++|++|||||+|+|+++++++|+|+++.|+.+... + .+++++||||+.++...+. .+++++
T Consensus 226 ----~s~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~lrigv~~~~~~~~~-~~~~~v 300 (491)
T PRK06828 226 ----YSQDTAGPFARTVTDAAILLGSLTGVDEKDVVTHKSEGIAEHDYTKYLDANGLNGAKIGVYNNAPKEYY-ESGEYD 300 (491)
T ss_pred ----cCCCeeccccCCHHHHHHHHHHHhCCCccCccccccCcCCCCchhhhhccccCCCCEEEEEcCcccccc-CCCHHH
Confidence 899999999999999999999999988665543211 0 1468999999854211122 589999
Q ss_pred HHHHHHHHHHhhhcCCcEEEE-ecCccchHHHHHHHHHHHhccC-cchhHHhhhcc--cccchHHHHHHHHhCCCC---C
Q psy15609 366 IGAIRKCVRALDEITEVSAEK-LENIKQFKKSYALWRYWMTKEP-GNFARDLVNQE--GEASWWRETIKIFLGMSD---H 438 (567)
Q Consensus 366 ~~a~~~av~~L~~~lG~~V~e-v~~lp~~~~~~~~~~~~~~~e~-~~~~~~l~~~~--~~~~~~~el~k~~~~~s~---~ 438 (567)
+++++++++.|+++ |++|++ + ++|.+......+ .+..|. .++..++.... .....+.+++.+...... .
T Consensus 301 ~~a~~~a~~~L~~~-G~~v~~~~-~~p~~~~~~~~~--~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (491)
T PRK06828 301 EKLFKETIEVLRSE-GATVVEDI-DIPSFHREWSWG--VLLYELKHSLDNYLSKLPSTIPVHSISELMEFNENIAERALK 376 (491)
T ss_pred HHHHHHHHHHHHhc-CCEEEecc-cCccchhHHHHH--HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHhhhchhhhhc
Confidence 99999999999996 999998 7 777654332111 111111 11222222111 122234454443221111 1
Q ss_pred chHHHHH-HHH--hCCChHHHHHHHHHHHHH--HHHHHHHhcC--CcEEEecCCCCCCCCCCccccCCCCcchhHhhHhh
Q psy15609 439 TLPAIMK-LID--MHLPLPKDDWAQEQTDKL--RKKLTDVLAD--DGVLIFPSCPCPATYHYTTFFRPYNFAYWAIFNVL 511 (567)
Q Consensus 439 ~~~~~~~-l~~--~~~s~~~~~~a~~~r~~l--~~~~~~ll~~--~dvLL~Pt~p~~Ap~~~~~~~~~~~~~yT~l~Nll 511 (567)
..+.... .++ ..++..+|.++++.|..+ ++.+.++|.+ +|+||+||.+.. .++|++
T Consensus 377 ~~~~~~~~~~~~g~~~~~~~y~~a~~~r~~~~~~~~~~~~~~~~~~D~ll~Pt~~~~-----------------~~~~~~ 439 (491)
T PRK06828 377 YGQTKLERRKDFPNTLRNPEYLNARLEDIYFSQEQGIDFALEKYNLDAILFPSYIGS-----------------TICAKA 439 (491)
T ss_pred cCHHHHHHHHhcCCCCChHHHHHHHHHHHHhhhHHHHHHHHHhcCCCEEEeCCCCcc-----------------cchhhc
Confidence 1133333 343 567889999999998875 4689999984 799999998864 235899
Q ss_pred CCCeEEEcCCCCCCCCceEEEEEcCCCChHHHHHHHHHHHHhhcCCCCCCCC
Q psy15609 512 GFPVVNVPVGLSKDGLPLGVQIVATTNNDKLCIDVANYLEKQSVIGWKPPFN 563 (567)
Q Consensus 512 GlPaisVP~G~~~~GLPvGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~p~p 563 (567)
|+|+++||+|++.+|||+||||||++|+|..||++|++||++ + .|+.+++
T Consensus 440 GlPaisvP~G~~~~GlPvGlQlig~~~~D~~LL~~A~a~E~~-~-~~r~~P~ 489 (491)
T PRK06828 440 GYPSIAIPAGYMEGGRPFGITLASTAFSEGTLIKLAYAFEQA-T-KHRKIPG 489 (491)
T ss_pred CCCeEEeecCCCCCCcCeEEEEECCCCCHHHHHHHHHHHHHh-C-CCCCCCC
Confidence 999999999998899999999999999999999999999999 6 4554444
No 23
>PRK07235 amidase; Provisional
Probab=100.00 E-value=3.8e-90 Score=752.29 Aligned_cols=448 Identities=21% Similarity=0.297 Sum_probs=370.4
Q ss_pred hhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhh
Q psy15609 68 ELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLD 147 (567)
Q Consensus 68 ~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D 147 (567)
++..+++.++.++++ +++++.|++++.++|| +.+++..|++.....++++..|...+
T Consensus 21 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~a~~~~ 77 (502)
T PRK07235 21 DLTDEELASYLSLMQ-ASLDAYDRIDELPDEI----------------------PPVKYPRTPGYRPEAEENPYGAWYVK 77 (502)
T ss_pred CCChhhHHHHHHHHH-hccCHHHHHHHHhhcc----------------------cccCCCcccccccCcccChhcChhhh
Confidence 355678999999999 9999999999999999 88999999999988899998898888
Q ss_pred HHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCC
Q psy15609 148 KQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNM 227 (567)
Q Consensus 148 ~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~ 227 (567)
.+ .+| +..+|||||||+|||||+++|++||+||..++++++.+||++|++|++||||++|||||||||++..+.|+
T Consensus 78 ~~-~~g---~~~gpL~GvPiavKD~i~v~G~ptt~Gs~~~~~~~p~~DA~vV~rL~~AGAii~GKTn~~Ef~~~~~t~n~ 153 (502)
T PRK07235 78 TS-IKG---AAEGKLAGKTVALKDNVAVAGVPMMNGSSTLEGFVPSFDATVVTRLLDAGATIVGKATCEDLCFSGGSHTS 153 (502)
T ss_pred hc-cCC---CCCCCcCCceEEEecccccCCcccCccChhhcCCCCCCCHHHHHHHHHCCCEEEEEecchhhhcCCCCCCC
Confidence 77 455 46799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcce
Q psy15609 228 VFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVS 307 (567)
Q Consensus 228 ~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~ 307 (567)
.||+|+||||++|+||||||||||+||+|.+++|+|||+|||||+||+||||||||||+|+||+.|++|.+ .++|+
T Consensus 154 ~~G~t~NP~~~~~~~GGSSgGsAAaVAaG~v~~aiGtDtGGSIRiPAa~cGvvGlKPT~G~vp~~G~~~~~----~sld~ 229 (502)
T PRK07235 154 DPGPVHNPRDPGYSAGGSSSGSAALVAAGEVDMAIGGDQGGSIRIPSAWCGIYGMKPTHGLVPYTGAFPIE----RTIDH 229 (502)
T ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHcCCCCeEEecCCCCCcCccHHHcCcceecCCCcccCCCCCCCcc----cccCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988 78999
Q ss_pred eccccCCHhhHHHHHHHhcCCcccCcCccccc----------CCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhh
Q psy15609 308 AGPIVKHAEDILPFIKCLVIPEKLHQLKLDRT----------HDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALD 377 (567)
Q Consensus 308 ~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~----------~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~ 377 (567)
+|||||+|+|+++++++|+|+|+.|+.....+ .+++++|||++.++. ....+++++.++++++++.|+
T Consensus 230 ~Gpmarsv~D~a~ll~viag~d~~d~~~~~~~~~~~~~~~l~~~~~~lrIgv~~~~~--~~~~~~~~v~~a~~~a~~~L~ 307 (502)
T PRK07235 230 LGPMTATVRDNALLLEVIAGRDGLDPRQPAQPPVDDYTAALDRGVKGLKIGILREGF--GLPNSEPEVDEAVRAAAKRLE 307 (502)
T ss_pred eeceeCCHHHHHHHHHHHcCCCCCCccccccCCccchhHHhccCCcCCEEEEecccc--CCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999886665443211 236889999986531 135689999999999999999
Q ss_pred hcCCcEEEEecCccchHHHHHHHHHHHhccCcchhHHhhhc--ccc-----cchHHHHHH-HHhCCCCCchHHHHH-HHH
Q psy15609 378 EITEVSAEKLENIKQFKKSYALWRYWMTKEPGNFARDLVNQ--EGE-----ASWWRETIK-IFLGMSDHTLPAIMK-LID 448 (567)
Q Consensus 378 ~~lG~~V~ev~~lp~~~~~~~~~~~~~~~e~~~~~~~l~~~--~~~-----~~~~~el~k-~~~~~s~~~~~~~~~-l~~ 448 (567)
+. |++|+++ ++|.......+|..+... ......+... +.. ...+.+.+. +.....+...+.+.. +..
T Consensus 308 ~~-G~~V~~v-~~p~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (502)
T PRK07235 308 DL-GATVEEV-SIPLHRLALAIWNPIATE--GATAQMMLGNGYGFNWKGLYDTGLLDAFGAGWRERADDLSETVKLVMLL 383 (502)
T ss_pred HC-CCEEEEe-CCCchhhHHHHHHHHHHH--HHHHHhhhccccccccccccchhHHHHHhhhhhcchhhcCHHHHHHHHh
Confidence 95 9999999 988766555555432211 1111111100 000 001122221 111111112233333 222
Q ss_pred -h----CCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCccccC-------CC-CcchhHhhHhhCCCe
Q psy15609 449 -M----HLPLPKDDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFFR-------PY-NFAYWAIFNVLGFPV 515 (567)
Q Consensus 449 -~----~~s~~~~~~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~~-------~~-~~~yT~l~NllGlPa 515 (567)
. .++..+|.++++.|+++++.|+++|+++|+||+||+|.+||.+++.... .. ...||.+||++|+|+
T Consensus 384 g~~~~~~~~~~~y~~a~~~r~~~~~~~~~~~~~~Dvll~Pt~p~~a~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~Pa 463 (502)
T PRK07235 384 GQYGLERYHGRYYAKARNLARRLRAAYDEALRKYDLLVMPTTPMVATPLPAPDASREEYVSRALEMIANTAPFDVTGHPA 463 (502)
T ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeeCCCCCCCCCcccccCchHHHHHHHHhhhccCccchhhCCCe
Confidence 2 3577899999999999999999999999999999999999988643110 01 234899999999999
Q ss_pred EEEcCCCCCCCCceEEEEEcCCCChHHHHHHHHHHHHh
Q psy15609 516 VNVPVGLSKDGLPLGVQIVATTNNDKLCIDVANYLEKQ 553 (567)
Q Consensus 516 isVP~G~~~~GLPvGvQvVg~~~~D~~lLavA~~lE~~ 553 (567)
++||+|+ .+|||+||||||++|+|+.||++|++||++
T Consensus 464 lsvP~g~-~~GlPvGlQlvg~~~~D~~lL~~A~~~E~~ 500 (502)
T PRK07235 464 MSVPCGL-VDGLPVGLMLVGRHFDEATILRAAAAFEAS 500 (502)
T ss_pred EEEECCc-CCCCCeEEEEeCCCCCHHHHHHHHHHHHhh
Confidence 9999999 589999999999999999999999999987
No 24
>PRK11910 amidase; Provisional
Probab=100.00 E-value=5.1e-89 Score=742.63 Aligned_cols=435 Identities=21% Similarity=0.296 Sum_probs=359.1
Q ss_pred hhhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcC---cccEEEeCChHHHHHHH
Q psy15609 67 NELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNS---KINSVVDNRFSEALEEA 143 (567)
Q Consensus 67 ~~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~---~lna~v~~~~~~Al~~A 143 (567)
..|++.++.+|+++|++|++||+||+++||+|| +++|+ .+|||++.+. +|+++|
T Consensus 160 ~~i~~~ti~~L~~~l~~g~lT~~elv~a~L~RI----------------------~~~n~~g~~LnA~i~~~~-~Al~~A 216 (615)
T PRK11910 160 PLIIGADVTKLQQLIATKQLSYKELAGIYLNRI----------------------KKYDQNGLNLNAITEINP-TIIAEA 216 (615)
T ss_pred ccchhCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCCCCCceeEEEEcCH-HHHHHH
Confidence 457788999999999999999999999999999 88897 8999999986 599999
Q ss_pred HHhhHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccC--
Q psy15609 144 KLLDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLW-- 221 (567)
Q Consensus 144 ~~~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~-- 221 (567)
+++|++++.+ ++|||||||+|||||+++||+||+||.++.+.++.+||++|++||+||||++|||||+||+++
T Consensus 217 ~~lD~~~~~~-----~gPL~GIPv~VKDni~t~G~pTTaGS~al~~~~p~~DA~vV~rLr~AGAIIlGKTNm~EfA~~~~ 291 (615)
T PRK11910 217 EQLDKENTTN-----KSALYGMPVLLKDNIGTKELPTSAGTVALKDWVIGKDATIVENLKANGALILGKTNMSEWAAGMD 291 (615)
T ss_pred HHHHHHhccC-----CCCcCCCEEEEEcCcccCCCccCcccHhhcCCCCCCCHHHHHHHHHCCCEEEEEeCcchhhhCCC
Confidence 9999886543 489999999999999999999999999999999999999999999999999999999999976
Q ss_pred ---CCCCCCCCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCC
Q psy15609 222 ---SETRNMVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRS 298 (567)
Q Consensus 222 ---~~~~n~~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~ 298 (567)
..++|.+||+|+||||++|+|||||||||++||+|++++|+|||||||||+||+||||+|||||+|+||+.|++|++
T Consensus 292 ~~~~~g~s~~~G~t~NP~~~~r~pGGSSsGSAAAVAaG~a~~AiGTDTgGSIR~PAa~cGvVGlKPT~G~vSr~GviPls 371 (615)
T PRK11910 292 EDLPNGYSGKKGQSKNPYSSNLDPSGSSSGSATAATSDFAAIAIGTETNGSIITPASAQSAVGYKPSQGLVNNKGIIPLS 371 (615)
T ss_pred CCCCCCCCCCCCCcCCCCCCCCCCCCCCchHHHHHhcCCceEEeecCCCCccccchHHcCceeEecCCCCCCCCCCcCCc
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceeccccCCHhhHHHHHHHhcCCcccCcCcccccCCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhh
Q psy15609 299 GKEARTMVSAGPIVKHAEDILPFIKCLVIPEKLHQLKLDRTHDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDE 378 (567)
Q Consensus 299 ~~~~~~~~~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~ 378 (567)
+++|++|||||+|+|++.++++|+|.++.+++.. .+++++||||+.++ .++++.++++++++.|++
T Consensus 372 ----~slDtvGPmaRsV~D~a~ll~vi~g~~~~~~l~~---~~lkglRIGv~~~~-------~~~~v~~a~~~a~~~L~~ 437 (615)
T PRK11910 372 ----SRFDTPGPLTRTVNDAYLTTNALTNTTSNPPLST---DALKGKRIGLLADG-------ESNEETAVIKKIKLDLQK 437 (615)
T ss_pred ----CCCCeeccccCCHHHHHHHHHHhcCCCCcCccCc---ccCCCCEEEEECCC-------CCHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999774444322 25889999998541 467899999999999999
Q ss_pred cCCcEEEE-ecCccchHHHHHHHHHHHhccCc-chhHHhhhcccccchHHHHHHHHhCCCCC---chHHHHHHHH---hC
Q psy15609 379 ITEVSAEK-LENIKQFKKSYALWRYWMTKEPG-NFARDLVNQEGEASWWRETIKIFLGMSDH---TLPAIMKLID---MH 450 (567)
Q Consensus 379 ~lG~~V~e-v~~lp~~~~~~~~~~~~~~~e~~-~~~~~l~~~~~~~~~~~el~k~~~~~s~~---~~~~~~~l~~---~~ 450 (567)
+ |++|++ + .+|.+......+...+..|.. ++..++.........+.++..+...++.. ..+. .++. ..
T Consensus 438 ~-Ga~Vve~~-~~p~~~~~~~~~~~l~~~E~~~~l~~yl~~~~~~v~sL~dl~~fn~~~~~~~~~~gq~--~~~~~~~~~ 513 (615)
T PRK11910 438 A-GATIIEGI-AVGEFEQKDTDYASLLNADFKHDLNQFLQVNHSPMSTLESIIQFNQTNPTRNMKYGQS--ELVKSQQST 513 (615)
T ss_pred C-CCEEEeCC-CCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHhcCcccccCcCHH--HHHhhhccC
Confidence 6 999998 6 667665555545444444322 24555543334445566665554433311 1111 1122 22
Q ss_pred CChHHHH-HHHHHHHHHHHHHHHHhc--CCcEEEecCCCCCCCCCCccccCCCCcchhHhhHhhCCCeEEEcCCCCC-CC
Q psy15609 451 LPLPKDD-WAQEQTDKLRKKLTDVLA--DDGVLIFPSCPCPATYHYTTFFRPYNFAYWAIFNVLGFPVVNVPVGLSK-DG 526 (567)
Q Consensus 451 ~s~~~~~-~a~~~r~~l~~~~~~ll~--~~dvLL~Pt~p~~Ap~~~~~~~~~~~~~yT~l~NllGlPaisVP~G~~~-~G 526 (567)
.+..++. .+++.++.+++.++++|. +.|+||+|+... . ....++++|+|+++||+|++. +|
T Consensus 514 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lDalv~P~~~~-------------~--~~~~~~~aG~PaItVP~G~~~~~G 578 (615)
T PRK11910 514 ITKQQADNLASNLIQSSQNELDSVLQKDKLDAVVTIGMGG-------------S--VMFLAPIAGNPELTIPAGYDEESN 578 (615)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCcEEEeCCCCC-------------c--chhhhhhcCCCeEEecccCCCCCC
Confidence 4444433 355566677888999996 789999997321 0 122356999999999999986 69
Q ss_pred CceEEEEEcCCCChHHHHHHHHHHHHhhcCCCCCCCC
Q psy15609 527 LPLGVQIVATTNNDKLCIDVANYLEKQSVIGWKPPFN 563 (567)
Q Consensus 527 LPvGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~p~p 563 (567)
||+|+||+|++|+|+.||++|++||++ +..|++|..
T Consensus 579 lPvGlqliG~~~sE~~LL~~A~a~Eq~-t~~r~~P~~ 614 (615)
T PRK11910 579 QPISLTFITARNSDKILLNMGYAYEQQ-SKNRKSPNL 614 (615)
T ss_pred cCeEEEEECCCCCHHHHHHHHHHHHHh-cCCCCCCCC
Confidence 999999999999999999999999999 888887753
No 25
>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence. They are widespread, being found in both prokaryotes and eukaryotes. AS enzymes catalyse the hydrolysis of amide bonds (CO-NH2), although the family has diverged widely with regard to substrate specificity and function. Nonetheless, these enzymes maintain a core alpha/beta/alpha structure, where the topologies of the N- and C-terminal halves are similar. AS enzymes characteristically have a highly conserved C-terminal region rich in serine and glycine residues, but devoid of aspartic acid and histidine residues, therefore they differ from classical serine hydrolases. These enzymes posses a unique, highly conserved Ser-Ser-Lys catalytic triad used for amide hydrolysis, although the catalytic mechanism for acyl-enzyme intermediate formation can differ between enzymes []. Examples of AS enzymes include: Peptide amidase (Pam) [], which catalyses the hydrolysis of the C-terminal amide bond of peptides. Fatty acid amide hydrolases [], which hydrolyse fatty acid amid substrates (e.g. cannabinoid anandamide and sleep-inducing oleamide), thereby controlling the level and duration of signalling induced by this diverse class of lipid transmitters. Malonamidase E2 [], which catalyses the hydrolysis of malonamate into malonate and ammonia, and which is involved in the transport of fixed nitrogen from bacteroids to plant cells in symbiotic nitrogen metabolism. Subunit A of Glu-tRNA(Gln) amidotransferase [],a heterotrimeric enzyme that catalyses the formation of Gln-tRNA(Gln) by the transamidation of misacylated Glu-tRNA(Gln) via amidolysis of glutamine. ; GO: 0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor; PDB: 1OCL_B 1OBK_A 1OBL_B 1OBJ_A 1OCM_B 1OCH_A 1OCK_B 1OBI_A 1O9Q_A 1O9N_B ....
Probab=100.00 E-value=3.7e-91 Score=751.87 Aligned_cols=413 Identities=30% Similarity=0.468 Sum_probs=328.7
Q ss_pred HHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhhHHHHcCCCCCCCCCcccceEEe
Q psy15609 90 EVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDKQIALDEIDFSQKPFLGVPFTS 169 (567)
Q Consensus 90 evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~~~~~~~~~~~~~PL~GvPi~v 169 (567)
||+++||+|| +++|+.+||+++..+++|+++|+++|++++++ ...+|||||||+|
T Consensus 1 e~~~~~~~ri----------------------~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~~---~~~~pL~Gip~~v 55 (441)
T PF01425_consen 1 ELVEAYLARI----------------------EAYNPELNAFVEVDFDEALAQARELDARRARG---KPRGPLHGIPISV 55 (441)
T ss_dssp HHHHHHHHHH----------------------HHHHHHH--EEEEEHHHHHHHHHHHHHHHHTT---SSSSTTTT-EEEE
T ss_pred CHHHHHHHHH----------------------HHhCcccCEEEEECcHHHHHHHHHHHHHHhhc---CCCCCCCCCceec
Confidence 8999999999 99999999999999999999999999999877 4789999999999
Q ss_pred ecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q psy15609 170 KNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVFGQTNNPYNLSRTVGGSSGGE 249 (567)
Q Consensus 170 KD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~G~t~NP~~~~r~~GGSSgGs 249 (567)
||+|+++|++||+|+..+++.++++||++|++||+||||++|||||||||++.++.|+.||+|+||||++++||||||||
T Consensus 56 KD~~~~~g~~tt~G~~~~~~~~~~~~a~~v~~L~~aGai~~gkt~~~e~~~~~~~~~~~~g~~~Np~~~~~~~GGSS~Gs 135 (441)
T PF01425_consen 56 KDNIDVAGLPTTAGSPALADNPPTEDAPVVQRLRAAGAIIIGKTNMPEFAMGPTTSNPLYGRTRNPWNPSRTPGGSSGGS 135 (441)
T ss_dssp ETTBSBTTSBB-TTSGGGTTBBBSSS-HHHHHHHHTT-EEEEEE--SGGGCSSSSTTTTTEE-EBTTBTTBE--SSSHHH
T ss_pred cccccccccccccccccccCcCcccccchhhheecccccceeeecccceeccccccccccccccCccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcceeccccCCHhhHHHHHHHhcCCc
Q psy15609 250 SAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSAGPIVKHAEDILPFIKCLVIPE 329 (567)
Q Consensus 250 aaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~v~ag~~ 329 (567)
|++||+|++++|+|||||||||+||+||||||||||.|+||.+|++|.+ .++|++|||||||+|+++++++|+|++
T Consensus 136 aaavaag~~~~a~GtDtgGSiR~PAa~~Gv~GlkPT~G~vs~~G~~~~~----~~~d~~GpmaRsv~Dl~~~l~vl~g~~ 211 (441)
T PF01425_consen 136 AAAVAAGFVPLAIGTDTGGSIRIPAAFCGVVGLKPTRGRVSRDGVFPLS----PSFDTVGPMARSVEDLALLLDVLAGPD 211 (441)
T ss_dssp HHHHHTTSSSEEEEEESSSTTHHHHHHHTSEEEE-STTSS--TTB-CSS----TTT-EEEEEESSHHHHHHHHHHHBSCB
T ss_pred ccccceecccccccccccccccCchhccccceecccccccccccccccc----ccccccccccCcHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999988 899999999999999999999999998
Q ss_pred ccCcCccc-----------ccCCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCccchHHHHH
Q psy15609 330 KLHQLKLD-----------RTHDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSAEKLENIKQFKKSYA 398 (567)
Q Consensus 330 p~~~~~l~-----------~~~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~V~ev~~lp~~~~~~~ 398 (567)
+.+..... ....++++||||+.+++ ....++++++++++++++.|+++ |++|+++ ++|.+.+...
T Consensus 212 ~~d~~~~~~~~~~~~~~~~~~~~~~~lrIGv~~~~~--~~~~~~~~v~~a~~~a~~~L~~~-G~~vv~~-~~p~~~~~~~ 287 (441)
T PF01425_consen 212 PWDPDSLPVPPPPPDFDAPLPKSLKGLRIGVPRDDG--QWVPVDPEVRRAFEEAAEALEAA-GAEVVEV-DLPDLDEAMD 287 (441)
T ss_dssp TTBTTSCSTT--SS-CSTTTTSTTTT-EEEEEGGGG---SSTSSHHHHHHHHHHHHHHHHT-T-EEEEE---TTGGHHHH
T ss_pred ccCCCccccccccccccccccccccCcccccccccc--ccccccHHHHHHHHHHHHhhccc-ccccccc-cCchHHHHHH
Confidence 65543332 22467899999998753 25789999999999999999996 9999999 9999888777
Q ss_pred HHHHHHhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHHHHH-------hCCChHHHHHHHHHHHHHHHHHH
Q psy15609 399 LWRYWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMKLID-------MHLPLPKDDWAQEQTDKLRKKLT 471 (567)
Q Consensus 399 ~~~~~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~l~~-------~~~s~~~~~~a~~~r~~l~~~~~ 471 (567)
.+...+..+... . +... ..+...+..... ....+.+...+. .......|.++++.|..+++++.
T Consensus 288 ~~~~~~~~e~~~--~-~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~r~~~~~~~~ 358 (441)
T PF01425_consen 288 AYYRIFVSEGAA--N-LARY----KDFARLLAKWRD--PPLSPIVRSRLEQGAAISSAEDDSEYYLQAQRRRARLRRRFD 358 (441)
T ss_dssp HHHHHHHHHHHH--H-HTTT----CSHHHHHHHHHH--HHSHHHHHHHHHHHHHHHCTTTTTTHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHH--H-Hhhh----hHHHHhhhcccc--cccccchhhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHH
Confidence 665544421110 0 0000 011111111000 000011111111 22233459999999999999999
Q ss_pred HHhcCCcEEEecCCCCCCCCCCccccCC----------CCcchhHhhHhhCCCeEEEcCCCCCCCCceEEEEEcCCCChH
Q psy15609 472 DVLADDGVLIFPSCPCPATYHYTTFFRP----------YNFAYWAIFNVLGFPVVNVPVGLSKDGLPLGVQIVATTNNDK 541 (567)
Q Consensus 472 ~ll~~~dvLL~Pt~p~~Ap~~~~~~~~~----------~~~~yT~l~NllGlPaisVP~G~~~~GLPvGvQvVg~~~~D~ 541 (567)
++|+++|+||+|+++.+||.++...... ....||.++|++|+|+++||+|+..+|||+||||||++|+|+
T Consensus 359 ~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~t~~~n~~g~PaisvP~g~~~~GlPvGvqlvg~~~~D~ 438 (441)
T PF01425_consen 359 ELFEEYDALLTPTTPVPAPPIGEPSPLGPDYTALWNLLDFTAYTSPANLAGLPAISVPVGFDPDGLPVGVQLVGRPGSDE 438 (441)
T ss_dssp HHHHHSSEEEEESSSSS-BBTTTTCCCTSCHHHHHHHHTTTTTTHHHHHHTHHEEEEEEEEETTTEEEEEEEEESTTBHH
T ss_pred HHHhhcceecccCCCcCCCccccccccccchhhhhhhhhhhccccccccccCcceeeecCCCCCCcCEeEEEECCCCCcc
Confidence 9999999999999999999998764311 124578999999999999999998899999999999999999
Q ss_pred HHH
Q psy15609 542 LCI 544 (567)
Q Consensus 542 ~lL 544 (567)
+||
T Consensus 439 ~LL 441 (441)
T PF01425_consen 439 KLL 441 (441)
T ss_dssp HHH
T ss_pred CcC
Confidence 997
No 26
>PRK06707 amidase; Provisional
Probab=100.00 E-value=9.1e-87 Score=726.37 Aligned_cols=432 Identities=23% Similarity=0.301 Sum_probs=347.5
Q ss_pred hhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHc---CcccEEEeCChHHHHHHHH
Q psy15609 68 ELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVN---SKINSVVDNRFSEALEEAK 144 (567)
Q Consensus 68 ~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n---~~lna~v~~~~~~Al~~A~ 144 (567)
.|...++.+|+++|++|++||+||+++||+|| +++| +.+|||++.+. +|+++|+
T Consensus 67 ~i~~~~i~~l~~~~~~g~lt~~el~~~~l~ri----------------------~~~~~~~~~lna~~~~~~-~al~~A~ 123 (536)
T PRK06707 67 EVVNATVDELQKMIDDGKLSYEELTSIYLFRI----------------------QEHDQNGITLNSVTEINP-NAMEEAR 123 (536)
T ss_pred hhhhCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCCCCCceEEEEECCH-HHHHHHH
Confidence 45678999999999999999999999999999 8888 47999999975 5999999
Q ss_pred HhhHHHHcCCCCCCCCCcccceEEeecCcCC-CCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccC--
Q psy15609 145 LLDKQIALDEIDFSQKPFLGVPFTSKNSTAS-KGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLW-- 221 (567)
Q Consensus 145 ~~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v-~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~-- 221 (567)
++|++++++ ..+|||||||+|||||++ +|++||+||..+.++++.+||++|++||+||||++|||||+||++.
T Consensus 124 ~~d~~~~~~----~~~pL~GiPi~vKD~i~~~~g~~TtaGs~~l~~~~~~~DA~vV~rLr~AGAiilGKtnm~E~a~~~~ 199 (536)
T PRK06707 124 KLDQERSRN----KKSNLYGIPVVVKDNVQTAKVMPTSAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANMSEWANYLS 199 (536)
T ss_pred HHHHHHhcC----CCCCcCCCeEEEecccccCCCCccCcccHhhccCCCCCChHHHHHHHHCCCEEEEecCchhhhccCC
Confidence 999987766 248999999999999999 9999999999999999999999999999999999999999999952
Q ss_pred ---CCCCCCCCCCCCCCCCC-CCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCC
Q psy15609 222 ---SETRNMVFGQTNNPYNL-SRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFR 297 (567)
Q Consensus 222 ---~~~~n~~~G~t~NP~~~-~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~ 297 (567)
..++|.+||+|+||||+ .++|||||||||++||+|++++|+|||||||||+||+||||+|||||+|+||+.|++|+
T Consensus 200 ~~~~~g~s~~~G~t~NP~~~~~~~pGGSSsGSAaAVAag~~~~aiGtDtgGSIr~PAs~~GvvGlKPT~G~vs~~Gv~p~ 279 (536)
T PRK06707 200 FTMPSGYSGKKGQNLNPYGPIKFDTSGSSSGSATVVAADFAPLAVGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPL 279 (536)
T ss_pred CCCCCCCCCCCCCCCCCCCcccCCCCCCCchHHHHHhCCCCceEEecCCCCcccccHHHcCeEEEeCCCCcccCCCCcCc
Confidence 46788899999999998 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcceeccccCCHhhHHHHHHHhcCCcccCcCccccc-------------CCCCCcEEEEEcCCCCCCCCCCCHH
Q psy15609 298 SGKEARTMVSAGPIVKHAEDILPFIKCLVIPEKLHQLKLDRT-------------HDLKQLKVFYVEQPGDLKVSPVSGE 364 (567)
Q Consensus 298 ~~~~~~~~~~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~-------------~~l~~lrIg~~~~~g~~~~~~vd~~ 364 (567)
+ +++|++|||+|+|+|+++++++|+|.|+.|+.....+ ..++++|||++.++ ..+++
T Consensus 280 s----~slDt~Gp~artV~D~a~~l~~~~g~d~~d~~~~~~~~~~~~~~~~~l~~~~l~~~rigv~~~~------~~~~~ 349 (536)
T PRK06707 280 A----ETLDTAGPMARTVKDAATLFNAMIGYDEKDVMTEKVKDKERIDYTKDLSIDGLKGKKIGLLFSV------DQQDE 349 (536)
T ss_pred c----cccCeecCeeCCHHHHHHHHHHHcCCCCCccccccccccCCcchhhhccccCCCCCEEEEECCc------CCCHH
Confidence 8 8999999999999999999999999887665432111 24788999998652 25788
Q ss_pred HHHH-HHHHHHHhhhcCCcEEEE-ecCccchHHHHHHHHHHHhccC-cchhHHhhhc-ccccchHHHHHHHHhCCCCCch
Q psy15609 365 MIGA-IRKCVRALDEITEVSAEK-LENIKQFKKSYALWRYWMTKEP-GNFARDLVNQ-EGEASWWRETIKIFLGMSDHTL 440 (567)
Q Consensus 365 v~~a-~~~av~~L~~~lG~~V~e-v~~lp~~~~~~~~~~~~~~~e~-~~~~~~l~~~-~~~~~~~~el~k~~~~~s~~~~ 440 (567)
+.++ ++++++.|+++ |++|++ + ++|..... ....+..|. .++..|+... +.....+.+++... . ....
T Consensus 350 ~~~a~~~~a~~~L~~~-Ga~iv~~~-~l~~~~~~---~~~~~~~e~~~~l~~y~~~~~~~~~~~~~~~~~~~--~-~~~~ 421 (536)
T PRK06707 350 NRKAVAEKIRKDLQDA-GAILTDYI-QLNNGGVD---NLQTLEYEFKHNVNDYFSQQKNVPVKSLEEIIAFN--K-KDSK 421 (536)
T ss_pred HHHHHHHHHHHHHHHc-CCEEEecc-CCchhhHH---HHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHhc--C-HHHH
Confidence 8888 59999999996 999999 8 77742211 111222211 1233333211 11112233332210 0 0000
Q ss_pred HHHHH---HHH----hCCChHHH-HHHHHHHHHHHHHHHHHhc--CCcEEEecCCCCCCCCCCccccCCCCcchhHhhHh
Q psy15609 441 PAIMK---LID----MHLPLPKD-DWAQEQTDKLRKKLTDVLA--DDGVLIFPSCPCPATYHYTTFFRPYNFAYWAIFNV 510 (567)
Q Consensus 441 ~~~~~---l~~----~~~s~~~~-~~a~~~r~~l~~~~~~ll~--~~dvLL~Pt~p~~Ap~~~~~~~~~~~~~yT~l~Nl 510 (567)
..+.. ++. ...+..+| ..+.+.|+.+++.++++|. +.|+|++|.. ..|.++|+
T Consensus 422 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~Dall~p~~-----------------~~t~~an~ 484 (536)
T PRK06707 422 RRIKYGQTLIEASEKSAITKDEFEKVVQTSQENAKKELDRYLVEKGLDALVMINN-----------------EEVLLSAV 484 (536)
T ss_pred HHHHccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEecCC-----------------CcchhhHh
Confidence 00000 001 11233344 3456677788899999998 7899999832 12678999
Q ss_pred hCCCeEEEcCCCCCCCCceEEEEEcCCCChHHHHHHHHHHHHhhcCCCCCCC
Q psy15609 511 LGFPVVNVPVGLSKDGLPLGVQIVATTNNDKLCIDVANYLEKQSVIGWKPPF 562 (567)
Q Consensus 511 lGlPaisVP~G~~~~GLPvGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~p~ 562 (567)
+|+|+++||+|++.+|+|+|+||||++|+|..||++|++||++ ...|++|+
T Consensus 485 aG~PaitvP~G~~~~GlP~Glqlig~~~~e~~LL~~A~~~E~~-~~~r~~p~ 535 (536)
T PRK06707 485 AGYPELAVPAGYDNNGEPVGAVFVGKQFGEKELFNIGYAYEQQ-SKNRKPPK 535 (536)
T ss_pred cCCCeEEEecccCCCCCCeEEEEECCCCChHHHHHHHHHHHHh-CcCCCCCC
Confidence 9999999999998899999999999999999999999999999 87777774
No 27
>PRK06565 amidase; Validated
Probab=100.00 E-value=1.5e-84 Score=702.96 Aligned_cols=461 Identities=23% Similarity=0.269 Sum_probs=357.3
Q ss_pred hhhccCHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHc-----CcccEEEeCChHHHHHH
Q psy15609 68 ELLLQSATTVATKIKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVN-----SKINSVVDNRFSEALEE 142 (567)
Q Consensus 68 ~i~~~s~~~l~~~i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n-----~~lna~v~~~~~~Al~~ 142 (567)
+|+.+|+.+|+++|++|++||+||+++||+|| +++| +.+|||++.+ ++|+++
T Consensus 3 ~i~~~si~~L~~~l~~g~~t~~elv~a~l~ri----------------------~~~~~~~~~~~lna~~~~~-~~Al~~ 59 (566)
T PRK06565 3 EVTEVSIAELRAALESGRTTAVELVKAYLARI----------------------DAYDGPATGTALNAVVVRN-PDALKE 59 (566)
T ss_pred ccccCCHHHHHHHHHcCCCCHHHHHHHHHHHH----------------------HHhCccccCcceEEEEecC-HHHHHH
Confidence 46678999999999999999999999999999 8889 6899999876 459999
Q ss_pred HHHhhHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCC
Q psy15609 143 AKLLDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWS 222 (567)
Q Consensus 143 A~~~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~ 222 (567)
|+++|+++++| +..+|||||||+|||+|+++|++||+||..+++.++++||++|++||+||||++||||||||+++.
T Consensus 60 A~~~D~~~~~g---~~~gpL~GIPi~vKD~~~v~G~~TT~Gs~~l~~~~~~~DA~vV~rLr~AGAIilGKTnm~E~a~g~ 136 (566)
T PRK06565 60 AEASDARRARG---ETLGPLDGIPYTAKDSYLVKGLTAASGSPAFKDLVAQRDAFTIERLRAAGAICLGKTNMPPMANGG 136 (566)
T ss_pred HHHHHHHHhcC---CCCCCCCCCEEEEecccccCCCCcccccHhhcCCCCCCCHHHHHHHHHCCCEEEEecccchhhhCC
Confidence 99999998877 367999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCCCCCCC----CCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCC
Q psy15609 223 ETRNMVFGQTNNPYNLSR----TVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRS 298 (567)
Q Consensus 223 ~~~n~~~G~t~NP~~~~r----~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~ 298 (567)
.+ |.+||+|+||||+.| +|||||||||++||+|++++|+|||||||||+||+||||||||||+|+||+.|++|++
T Consensus 137 ~~-~~~~G~t~NP~n~~~~~~~~pGGSSgGsAaAVAag~~~~alGtDtgGSIR~PAa~~GivG~KPT~G~vs~~Gv~p~~ 215 (566)
T PRK06565 137 MQ-RGVYGRAESPYNAAYLTAPFASGSSNGAGTATAASFSAFGLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLT 215 (566)
T ss_pred CC-CCCCCCcCCCcCcccCcCCCCCCCCccHHHHHhCCCCcceeecCCCCchhhhHHHcCeeEEeCCCCccCCCCccccc
Confidence 65 779999999999999 5999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcceeccccCCHhhHHHHHHHhcCCcccCcC--------------------ccc----ccCCCCCcEEEEEcCCC
Q psy15609 299 GKEARTMVSAGPIVKHAEDILPFIKCLVIPEKLHQL--------------------KLD----RTHDLKQLKVFYVEQPG 354 (567)
Q Consensus 299 ~~~~~~~~~~GpmaR~v~Dl~~ll~v~ag~~p~~~~--------------------~l~----~~~~l~~lrIg~~~~~g 354 (567)
.++|++|||+|+|+|+++++++|+|.|+.|.. .+. ....++++|||+++...
T Consensus 216 ----~s~D~vGp~aRsV~D~a~~l~vl~g~D~~d~~~~~~~~~~~~~p~~~~~~~~~y~~~~~~~~~l~g~RIGv~~~~~ 291 (566)
T PRK06565 216 ----PTMDVVVPYARTMADLLEVLDVIVADDPDTRGDLWRLQPWVPIPKASEVRPASYLALAAGADALKGKRFGVPRMYI 291 (566)
T ss_pred ----CCCCeecceeCCHHHHHHHHHHhcCCCcccccchhhccccccCccccccCccchhhhhccccCCCCCEEEEEChhh
Confidence 89999999999999999999999998754421 000 01257899999986421
Q ss_pred -CC----------------CCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCccchHHHHHH--H------------HHH
Q psy15609 355 -DL----------------KVSPVSGEMIGAIRKCVRALDEITEVSAEKLENIKQFKKSYAL--W------------RYW 403 (567)
Q Consensus 355 -~~----------------~~~~vd~~v~~a~~~av~~L~~~lG~~V~ev~~lp~~~~~~~~--~------------~~~ 403 (567)
.. ....+++++.++++++++.|+++ |++|+++ ++|.+.. ++- + ..+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~a~~~L~~~-Ga~vv~v-~~p~~~~-~e~~~~~~~~~~~~~~~~~~~ 368 (566)
T PRK06565 292 NADPDAGTSENPGIGGPTGQRIHTRPSVIDLWEAARRALEAA-GAEVIEV-DFPLVSN-CEGDRPGAPTVFNRGLVSPEF 368 (566)
T ss_pred ccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHC-CCEEEEe-ecCCccc-cccccccccccccccccchhh
Confidence 00 01136899999999999999996 9999999 8886321 110 0 001
Q ss_pred HhccC-----cchhHHhhhcc-cccchHHHHHHHHh-CCCCCchH----HHHH----HHH---hCC----ChHHHHHHHH
Q psy15609 404 MTKEP-----GNFARDLVNQE-GEASWWRETIKIFL-GMSDHTLP----AIMK----LID---MHL----PLPKDDWAQE 461 (567)
Q Consensus 404 ~~~e~-----~~~~~~l~~~~-~~~~~~~el~k~~~-~~s~~~~~----~~~~----l~~---~~~----s~~~~~~a~~ 461 (567)
...|. .+++.||.... .....+.++..... ......++ .+.. +.+ ... ....|.+.++
T Consensus 369 ~~~e~~~~~~~~~~~yL~~~~~~~~~sl~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (566)
T PRK06565 369 LHDELWELSGWAFDDFLRANGDPKLNRLADVDGPQIFPHDPGTLPNREGDLAAGMDEYVNMAKRGLKSWDQIPTLPDGLR 448 (566)
T ss_pred hhccccchhHHHHHHHHHhcCCCCCCCHHHhhhhhcccCcccccccchhhhhhhHHHHHHHhhcCCCChhhccchHHHHH
Confidence 11111 12445554332 23344444443211 11111111 1100 111 111 2234556666
Q ss_pred HHHHHHH-HHHHHhc--CCcEEEecCCCCCCCCCCccccCCC--------Ccch-hHhhHhhCCCeEEEcCCCC-CCCCc
Q psy15609 462 QTDKLRK-KLTDVLA--DDGVLIFPSCPCPATYHYTTFFRPY--------NFAY-WAIFNVLGFPVVNVPVGLS-KDGLP 528 (567)
Q Consensus 462 ~r~~l~~-~~~~ll~--~~dvLL~Pt~p~~Ap~~~~~~~~~~--------~~~y-T~l~NllGlPaisVP~G~~-~~GLP 528 (567)
.++..++ .+++.|. +.|+|++|+.+..++...+...... .... ....+.+|+|+|+||+|+. ..|||
T Consensus 449 ~l~~~~~~~~e~~~~~~~lDalv~P~~~~~~~~~~~~~~~~~~~~~~~g~~~~ng~~a~~~~G~P~vtVP~G~~~~~G~P 528 (566)
T PRK06565 449 GLEKTRKLDLEDWMDGLGLDAVLFPTVADVGPADADVNPASADIAWSNGVWVANGNLAIRHLGVPTVTVPMGVMADIGMP 528 (566)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEeCCCCCCccccccccchhhhhccccCcccccchhhHHhcCCCeeEeeccccCCCCCC
Confidence 6666655 5777775 4589999999888876554322110 0122 3455999999999999997 47999
Q ss_pred eEEEEEcCCCChHHHHHHHHHHHHhhcCCCCCCCC
Q psy15609 529 LGVQIVATTNNDKLCIDVANYLEKQSVIGWKPPFN 563 (567)
Q Consensus 529 vGvQvVg~~~~D~~lLavA~~lE~~~~~gw~~p~p 563 (567)
+|++|+|++|+|..||++|+++|++ ...+++|.+
T Consensus 529 vGl~~~G~a~~e~~Ll~~A~a~E~~-~~~r~~p~~ 562 (566)
T PRK06565 529 VGLTFAGRAYDDNALLRFAAAFEAT-GSRRMVPPR 562 (566)
T ss_pred eeEEeecCCcchHHHHHHHHHHHHH-hcCCCCCCC
Confidence 9999999999999999999999999 766666643
No 28
>TIGR02713 allophanate_hyd allophanate hydrolase. Allophanate hydrolase catalyzes the second reaction in an ATP-dependent two-step degradation of urea to ammonia and C02, following the action of the biotin-containing urea carboxylase. The yeast enzyme, a fusion of allophanate hydrolase to urea carboxylase, is designated urea amidolyase.
Probab=100.00 E-value=1.3e-84 Score=712.91 Aligned_cols=399 Identities=23% Similarity=0.279 Sum_probs=329.9
Q ss_pred cEEEeCCh-HHHHHHHHHhhHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCC
Q psy15609 129 NSVVDNRF-SEALEEAKLLDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGA 207 (567)
Q Consensus 129 na~v~~~~-~~Al~~A~~~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGA 207 (567)
|++++... ++|+++|+++|++++++ ..+|||||||+|||||+++|++||+||..+. +++.+||++|++||+|||
T Consensus 2 ~a~i~~~~~e~al~~A~~ld~~~~~~----~~~PL~GvP~aVKD~idvaG~pTTaGs~~~~-~~p~~DA~vV~rLr~AGA 76 (561)
T TIGR02713 2 EAWISLLSEEDLLAQAAALDARDARP----ERLPLYGVPFAVKDNIDVAGLPTTAACPAFA-YTPEEDATVVALLRAAGA 76 (561)
T ss_pred cEEEEeCCHHHHHHHHHHHHHHHhcC----CCCCccCCeEEEEcccccCCCccCcCCHhHc-CCCCcCHHHHHHHHHCCC
Confidence 67888754 78999999999998766 3589999999999999999999999999986 788999999999999999
Q ss_pred eEEEEcCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCC
Q psy15609 208 ILLGVTNVPELCLWSETRNMVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTG 287 (567)
Q Consensus 208 I~lgkTn~~E~~~~~~~~n~~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G 287 (567)
|++||||||||+++..+.|++||.|+||||+.|+|||||||||++||+|++++|+|||||||||+||+||||||||||+|
T Consensus 77 IiiGKTN~~Efa~g~~g~n~~~G~t~NP~d~~~~~GGSSsGSAaAVAaG~v~~alGTDtgGSiRiPAa~cGlvGlKPT~G 156 (561)
T TIGR02713 77 IVVGKTNLDQFATGLVGTRSPYGAVRNAFDPAYISGGSSSGSAVAVARGLVPFALGTDTAGSGRVPAALNNIVGLKPTKG 156 (561)
T ss_pred EEEEEeCchHhhcCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCCceEEeecCCCcchhhhHHhCceeEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCCCCCCCCcceeccccCCHhhHHHHHHHhcCCcccCcCcccccC-----CCCCcEEEEEcCCCCCCCCCCC
Q psy15609 288 FINTKGMGFRSGKEARTMVSAGPIVKHAEDILPFIKCLVIPEKLHQLKLDRTH-----DLKQLKVFYVEQPGDLKVSPVS 362 (567)
Q Consensus 288 ~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~~-----~l~~lrIg~~~~~g~~~~~~vd 362 (567)
+||+.|++|.+ .++|++|||+|+++|++.++++|+|+|+.|+.....+. ..+++|||++..+. .....+
T Consensus 157 ~vs~~Gv~p~~----~slD~vG~~Arsv~D~~~~l~v~~g~d~~d~~s~~~p~~~~~~~~~~lrigv~~~~~--~~~~~~ 230 (561)
T TIGR02713 157 LVSTTGVVPAC----RSLDCVSIFALTVADAEQVLRIAAAPDARDPYSRPLPAAALRRLPPPPRVGVPRAAQ--LEFFGD 230 (561)
T ss_pred CccCCCccccc----cCCCeeechhCCHHHHHHHHHhhcCCCCcCccccCCCchhhcccCCCCEEEEECchh--cCCCCC
Confidence 99999999998 89999999999999999999999998876765443221 23779999996332 111258
Q ss_pred HHHHHHHHHHHHHhhhcCCcEEEEecCccchHHHHHHHHHH-HhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchH
Q psy15609 363 GEMIGAIRKCVRALDEITEVSAEKLENIKQFKKSYALWRYW-MTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLP 441 (567)
Q Consensus 363 ~~v~~a~~~av~~L~~~lG~~V~ev~~lp~~~~~~~~~~~~-~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~ 441 (567)
++++++++++++.|++. |++|+++ +++.+.+.....+.. +..|. + ..+.+++ ..+.+...+
T Consensus 231 ~~v~~a~~~a~~~L~~~-G~~v~~v-~~~~~~~~~~~l~~~~~~~e~--~-----------~~~~~~~---~~~~~~~~p 292 (561)
T TIGR02713 231 SQAEAAFAAAVERLEAL-GVEVVEI-DFAPFLETAALLYEGPWVAER--Y-----------AAVGEFV---EAQPDALDP 292 (561)
T ss_pred HHHHHHHHHHHHHHHHC-CCEEEEe-cchhHHHHHHHHHHHHHHHHH--H-----------HHHHHHH---hhChhhcCH
Confidence 89999999999999995 9999999 887654333222111 11100 0 0011111 111122223
Q ss_pred HHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCc---ccc-CCCCcchhHhhHhhCCCe
Q psy15609 442 AIMKLID--MHLPLPKDDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYT---TFF-RPYNFAYWAIFNVLGFPV 515 (567)
Q Consensus 442 ~~~~l~~--~~~s~~~~~~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~---~~~-~~~~~~yT~l~NllGlPa 515 (567)
.+..+++ ..++..+|.+++++|+++++.+.++|.++|+||+||+|.+++.+.. +.. ......||.++|++|+|+
T Consensus 293 ~~~~~l~~g~~~sa~~~~~a~~~r~~l~~~~~~~~~~~DvLl~Pt~p~~~~~~~~~~~~~~~~~~~~~yT~~~Nl~glPA 372 (561)
T TIGR02713 293 VVRGIITSATRFSAADAFAAQYRLAALRRKAEALLAGVDVLLVPTAPTHPTIEEVLADPVGLNSRLGTYTNFVNLLDLCA 372 (561)
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCchhccCCchhhhhhhhcccccccccCCce
Confidence 3333333 6788899999999999999999999999999999999998754321 110 111135899999999999
Q ss_pred EEEcCCCCCCCCceEEEEEcCCCChHHHHHHHHHHHHhhcCCC
Q psy15609 516 VNVPVGLSKDGLPLGVQIVATTNNDKLCIDVANYLEKQSVIGW 558 (567)
Q Consensus 516 isVP~G~~~~GLPvGvQvVg~~~~D~~lLavA~~lE~~~~~gw 558 (567)
++||+|+..+|||+||||||++++|+.||++|++||++ .+|
T Consensus 373 isvP~g~~~~GlPvGvqlig~~~~D~~LL~~A~~le~~--~~~ 413 (561)
T TIGR02713 373 VAVPAGFRSDGLPFGVTLIGPAFHDAALASLGRRLQAA--SAL 413 (561)
T ss_pred EEeecccCCCCCCEEEEEEcCCCChHHHHHHHHHHHhc--cCc
Confidence 99999998899999999999999999999999999998 355
No 29
>PRK07139 amidase; Provisional
Probab=100.00 E-value=1.9e-82 Score=682.79 Aligned_cols=383 Identities=20% Similarity=0.251 Sum_probs=302.9
Q ss_pred CCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCCCCCCCCCCC
Q psy15609 158 SQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVFGQTNNPYN 237 (567)
Q Consensus 158 ~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~G~t~NP~~ 237 (567)
..+|||||||+|||+|+++|++||+||..++++++.+||++|++||+||||++||||||||+++..+.|.+||+|+||||
T Consensus 33 ~~gpL~GvPvavKD~~~v~G~~tt~Gs~~l~~~~~~~dA~vV~rLr~AGAIilGKTn~~Efa~~~~~~n~~~G~t~NP~~ 112 (439)
T PRK07139 33 KDGPLANCVFTIKDNFATSEGPTHASSKSLENFKPSYNATVVQKLINAGAKPVAKVHCDELGLGGTGLFSAFGLIKNPLD 112 (439)
T ss_pred CCCCcCCcEEEEEcceecCCCccCcChHHHccCCCCCchHHHHHHHHCCCEEEEeechhhHhcCCCCCCCCCCCcCCCCC
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcceeccccCCHhh
Q psy15609 238 LSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSAGPIVKHAED 317 (567)
Q Consensus 238 ~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~D 317 (567)
++|+||||||||||+||++ +++|+|||+|||||+||+||||||||||+|+||+.|++|++ .++|++|||||+++|
T Consensus 113 ~~~~pGGSSgGSAAaVAag-~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~vs~~G~~p~~----~sld~~Gp~arsv~D 187 (439)
T PRK07139 113 SSKLVGGSSSGSAATFNKN-ISFAIGSDTGDSVRLPASFIGKVGFKPSYGAISRYGLFAYA----SSLDTVAYFTHNVND 187 (439)
T ss_pred CCCCCCCCchHHHHHHHCC-CCEEEEcCCCcchhhhHHHcCeEEEeCCCCCcCCCCcccCc----ccCCccccccCCHHH
Confidence 9999999999999999987 69999999999999999999999999999999999999988 799999999999999
Q ss_pred HHHHHHHhcCCcccCcCccccc----CCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCccc-
Q psy15609 318 ILPFIKCLVIPEKLHQLKLDRT----HDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSAEKLENIKQ- 392 (567)
Q Consensus 318 l~~ll~v~ag~~p~~~~~l~~~----~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~V~ev~~lp~- 392 (567)
+++++++|+|+++.|+.....+ ..++++||||... ...++++++++++++++.|++. |++|+++ ++|.
T Consensus 188 ~a~~~~vl~g~d~~d~~~~~~~~~~~~~~~~lrig~~~~-----~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~-~~~~~ 260 (439)
T PRK07139 188 AIILSKVLFGKDENDLTSVDVKINNVKKTKPKKVAYLDC-----FKELEEYVAKKYKKLINILKSE-NIEVEKI-KIDEK 260 (439)
T ss_pred HHHHHHHHcCCCcCCccccccCcccccccCCCEEEEECc-----cccCCHHHHHHHHHHHHHHHHC-CCEEEEe-CCChh
Confidence 9999999999886666543222 1357899999743 2457999999999999999996 9999998 8764
Q ss_pred -hHHHHHHHHHHHhccCcc-hhHHhh---hcccccchHHHHHHHHhCCCCCchHHHHHHHH--hCCC-----hHHHHHHH
Q psy15609 393 -FKKSYALWRYWMTKEPGN-FARDLV---NQEGEASWWRETIKIFLGMSDHTLPAIMKLID--MHLP-----LPKDDWAQ 460 (567)
Q Consensus 393 -~~~~~~~~~~~~~~e~~~-~~~~l~---~~~~~~~~~~el~k~~~~~s~~~~~~~~~l~~--~~~s-----~~~~~~a~ 460 (567)
+......|......|... +..+.. ........+.+.+... ......+.+...+. ..++ ..+|.+++
T Consensus 261 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~ 338 (439)
T PRK07139 261 LLKAIKPVYKIISYSEASSNLANLNGIAFGNREKGSSWEEIMINT--RSEGFGKMVQKRLILGSYFLEEENQEKYFLKAK 338 (439)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccHHHHHHhc--chhccCHHHHHHHHcccccccccccHHHHHHHH
Confidence 222122221111111100 111000 0000111122222111 11111122222222 2233 34588999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCcccc--CCCCcchhHhhHhhCCCeEEEcCCCCCCCCceEEEEEcCCC
Q psy15609 461 EQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFF--RPYNFAYWAIFNVLGFPVVNVPVGLSKDGLPLGVQIVATTN 538 (567)
Q Consensus 461 ~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~--~~~~~~yT~l~NllGlPaisVP~G~~~~GLPvGvQvVg~~~ 538 (567)
+.|+++++.|.++|+++|+||+||+|++||.++.... ..+...+|.++|++|+|+++||+| ..+|||+||||+|+++
T Consensus 339 ~~r~~~~~~~~~~f~~~D~ll~Pt~~~~ap~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g-~~~glPiGlqivg~~~ 417 (439)
T PRK07139 339 KVRRVIKNYYESIHNKFDIVIYPAYADIAPDIDENENKSDNYMDYILTISNLVGNPSLSIPLG-KYNNLPFNLAIDSKIY 417 (439)
T ss_pred HHHHHHHHHHHHHHhcCCEEEeCCCCCCCCcccccccchhhhhhhcccCcccCCCCeEEEeCC-CCCCCCeEEEEECCCC
Confidence 9999999999999999999999999999998865211 111111477899999999999999 5789999999999999
Q ss_pred ChHHHHHHHHHHHHhhcC
Q psy15609 539 NDKLCIDVANYLEKQSVI 556 (567)
Q Consensus 539 ~D~~lLavA~~lE~~~~~ 556 (567)
+|+.||++|++||++ +.
T Consensus 418 ~D~~LL~~A~~lE~~-~~ 434 (439)
T PRK07139 418 DDEKLLSYSLYIEEL-IK 434 (439)
T ss_pred ChHHHHHHHHHHHHH-hc
Confidence 999999999999998 54
No 30
>PRK08310 amidase; Provisional
Probab=100.00 E-value=4.1e-81 Score=664.75 Aligned_cols=362 Identities=21% Similarity=0.304 Sum_probs=299.0
Q ss_pred CCCCCcccceEEeecCcCCCCCcCCCCccccc--CCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCCCCCCCC
Q psy15609 157 FSQKPFLGVPFTSKNSTASKGLNFSIGLLKRK--DVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVFGQTNN 234 (567)
Q Consensus 157 ~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~--~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~G~t~N 234 (567)
+..+|||||||+|||+|+++|++||+||..+. +.++++||++|++||+||||++||||||||+|+.++.|..||+|+|
T Consensus 21 ~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~~~dA~vV~~L~~aGAii~GKTn~~E~~~~~~~~n~~~G~t~N 100 (395)
T PRK08310 21 AASGPLAGLRFAVKDVFDVAGYVTGCGNPDWLAESPVATRTAPAVEKLLAAGARFVGKTQTDELAFSLNGQNAHYGTPVN 100 (395)
T ss_pred CCCCCcCCCeEEEeeccccCCCccCCCCHHHHhcCCCCCCCHHHHHHHHHCCCEEEEeccchHHhcCCCCCCCCCCCCCC
Confidence 46799999999999999999999999999884 4688899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcceeccccCC
Q psy15609 235 PYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSAGPIVKH 314 (567)
Q Consensus 235 P~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~ 314 (567)
|||+.|+||||||||||+||+|++++|+|||||||||+||+||||||||||+|+||++|+.|.+ .++|++|||||+
T Consensus 101 P~~~~~~pGGSSgGsAaaVAag~~~~aiGtDtGGSIRiPAa~cGv~G~KPT~Grvs~~G~~~~~----~~~d~~Gp~ars 176 (395)
T PRK08310 101 PAAPDRVPGGSSSGSAAAVAGGLADFALGTDTGGSVRAPASFCGLYGLRPTHGRISLEGVMPLA----PSFDTVGWFARD 176 (395)
T ss_pred CCCCCCCCCCCchHHHHHHHcCCcceEEecCCCCCeecchHhcCeeEeecCCCcccCCCCcccc----cCCCeeeeeeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999988 789999999999
Q ss_pred HhhHHHHHHHhcCCcccCcCcccccCCCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCccc--
Q psy15609 315 AEDILPFIKCLVIPEKLHQLKLDRTHDLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSAEKLENIKQ-- 392 (567)
Q Consensus 315 v~Dl~~ll~v~ag~~p~~~~~l~~~~~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~V~ev~~lp~-- 392 (567)
++|+++++++|+|.++.+. ...+||++..+ ....++++++++++++++.|+++ +.+++++ +.+.
T Consensus 177 v~D~~~~~~~l~g~~~~~~--------~~~~ri~~~~~----~~~~~~~~v~~a~~~a~~~L~~~-~g~vv~~-~~~~~~ 242 (395)
T PRK08310 177 IALLERVGEVLLGDDAQEF--------PLTQRLLIPVD----LFALLDPAVRAALEAALARLRPH-LGPAKPA-SVPPLS 242 (395)
T ss_pred HHHHHHHHHHHcCCCcccC--------CcCceEEEecc----ccccCCHHHHHHHHHHHHHHHHh-CCceeee-cCCccc
Confidence 9999999999999874321 12468988754 24568999999999999999985 4488887 6442
Q ss_pred hHHHHHHHHHHHhccCcchhHHhhhcccccchHHHHHHHHhCCCCCchHHHHHHHH--hCCChHHHHHHHHHHHHHHHHH
Q psy15609 393 FKKSYALWRYWMTKEPGNFARDLVNQEGEASWWRETIKIFLGMSDHTLPAIMKLID--MHLPLPKDDWAQEQTDKLRKKL 470 (567)
Q Consensus 393 ~~~~~~~~~~~~~~e~~~~~~~l~~~~~~~~~~~el~k~~~~~s~~~~~~~~~l~~--~~~s~~~~~~a~~~r~~l~~~~ 470 (567)
+......+...... +... .+.+.++ .......+.+...++ ..++..+|.++.+.|+++++++
T Consensus 243 ~~~~~~~~~~~~~~---~~~~----------~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~ 306 (395)
T PRK08310 243 LDEWYEAFRVLQAA---EAWE----------THGAWIS---SGNPQLGPGVADRFAAGAEVTADQVEAARARRAAFAREL 306 (395)
T ss_pred HHHHHHHHHHHHHH---HHHH----------HHHHHHH---hchhhcCHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHH
Confidence 33332222111111 0000 0011111 011111133333233 6688899999999999999999
Q ss_pred HHHhcCCcEEEecCCCCCCCCCCccccCC-----CCcchhHhhHhhCCCeEEEcCCCCCCCCceEEEEEcCCCChHHHHH
Q psy15609 471 TDVLADDGVLIFPSCPCPATYHYTTFFRP-----YNFAYWAIFNVLGFPVVNVPVGLSKDGLPLGVQIVATTNNDKLCID 545 (567)
Q Consensus 471 ~~ll~~~dvLL~Pt~p~~Ap~~~~~~~~~-----~~~~yT~l~NllGlPaisVP~G~~~~GLPvGvQvVg~~~~D~~lLa 545 (567)
.++|.++|+||+|++|.+||+++...... ....||.+||++|+|+++||+|. .+|||+||||||++++|++||+
T Consensus 307 ~~~~~~~Dvll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~t~~~N~~G~PaisvP~g~-~~glPvglQivg~~~~D~~lL~ 385 (395)
T PRK08310 307 AALLGPDAVLLLPTVPGAAPLRGAPFEALEAYRERALRLLCIAGLAGLPQISLPLAS-VDGAPFGLSLIGPRGSDRSLLA 385 (395)
T ss_pred HHHhcCCCEEEeCCCCCCCccCCCccchHHHHHHHHHhhceeehhcCCCeEEEECCC-CCCCCEEEEEECCCCCHHHHHH
Confidence 99999999999999999999987532111 12358999999999999999997 6899999999999999999999
Q ss_pred HHHHHHHh
Q psy15609 546 VANYLEKQ 553 (567)
Q Consensus 546 vA~~lE~~ 553 (567)
+|++||++
T Consensus 386 ~a~~le~~ 393 (395)
T PRK08310 386 LAQTIAAA 393 (395)
T ss_pred HHHHHHhh
Confidence 99999997
No 31
>PLN02722 indole-3-acetamide amidohydrolase
Probab=100.00 E-value=5.7e-79 Score=651.15 Aligned_cols=397 Identities=22% Similarity=0.294 Sum_probs=309.1
Q ss_pred cCcccEEEeCChHHHHHHHHHhhHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccC-C-CCCCcHHHHHHH
Q psy15609 125 NSKINSVVDNRFSEALEEAKLLDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKD-V-KGTEDAYIVERL 202 (567)
Q Consensus 125 n~~lna~v~~~~~~Al~~A~~~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~-~-~a~~da~~V~~L 202 (567)
|..+||+++.. +. ++......+|||||||+|||+|+++|++||+||..+.+ . ++.+||++|++|
T Consensus 4 ~~~~~a~~~~~--~~------------~~~~~~~~gpL~GvPiaVKD~~~v~G~~Tt~GS~~~~~~~~~~~~dA~vV~rL 69 (422)
T PLN02722 4 NPDYGAFMEKF--VL------------SPTSSSHDLPLHGLTFAVKDIFDVEGYVTGFGNPDWARTHSAATSTAPAVLAV 69 (422)
T ss_pred CCCCCcceeec--cc------------cCCCCCCCCCCCCCeEEEEcccccCCCccCCCCHHHHhcCCCCCCChHHHHHH
Confidence 55789999852 11 00000256899999999999999999999999998774 4 567999999999
Q ss_pred HHCCCeEEEEcCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceee
Q psy15609 203 KSAGAILLGVTNVPELCLWSETRNMVFGQTNNPYNLSRTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGY 282 (567)
Q Consensus 203 r~aGAI~lgkTn~~E~~~~~~~~n~~~G~t~NP~~~~r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~ 282 (567)
|+||||++|||||+||+++..+.|.+||.|+||||+.|+||||||||||+||+|.+++++|||+|||||+||+|||||||
T Consensus 70 ~~AGAiilGKTn~~Efa~~~~g~n~~~G~t~NP~~~~r~pGGSSsGSAaAVAaG~~p~AlGtDtgGSIRiPAa~cGvvG~ 149 (422)
T PLN02722 70 LRGGATCVGKTIMDEMAYSINGENAHYGTPTNPIAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGF 149 (422)
T ss_pred HHCCCEEEEEechhhHhhCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceEeecCCCcccccChhHcceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCcCCCCCCCCCCCCCCcceeccccCCHhhHHHHHHHhcCCcccCcCcccccCCCCCcEEEEEcCCCCCCCCCCC
Q psy15609 283 KLTTGFINTKGMGFRSGKEARTMVSAGPIVKHAEDILPFIKCLVIPEKLHQLKLDRTHDLKQLKVFYVEQPGDLKVSPVS 362 (567)
Q Consensus 283 KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~v~ag~~p~~~~~l~~~~~l~~lrIg~~~~~g~~~~~~vd 362 (567)
|||+|+||+.|++|++ +++|++|||+|+++|+++++++|+|+++.++ ...+||++.++... .....+
T Consensus 150 KPT~G~vp~~G~~pla----~sld~~G~~ar~v~D~a~~~~~l~g~~~~d~--------~~~~ri~~~~~~~~-~~~~~~ 216 (422)
T PLN02722 150 RPSHGAVSTVGVIPMA----QSFDTVGWFARDPVILKRVGHVLLQQPDVNP--------IKPSQIIIAEDCFQ-LSSIPH 216 (422)
T ss_pred ecCCCccCCCCCCccc----CCCCcccceeCCHHHHHHHHHHHcCCCCCCC--------cCCceEEechhhhh-hccccc
Confidence 9999999999999998 8999999999999999999999999874332 23479998864210 013457
Q ss_pred HHHHHHHHHHHHHhhhcCCcEEEEecCccc-hHHHHHHHHHHHhcc-------CcchhHHhhhc--ccccchHHHHHH-H
Q psy15609 363 GEMIGAIRKCVRALDEITEVSAEKLENIKQ-FKKSYALWRYWMTKE-------PGNFARDLVNQ--EGEASWWRETIK-I 431 (567)
Q Consensus 363 ~~v~~a~~~av~~L~~~lG~~V~ev~~lp~-~~~~~~~~~~~~~~e-------~~~~~~~l~~~--~~~~~~~~el~k-~ 431 (567)
+++.+++.++++.|++. |++|+++ +++. .....+.+...+... ...+....... -...+ ..+..+ +
T Consensus 217 ~~~~~~~~~~~~~l~~~-g~~v~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~~~~~ 293 (422)
T PLN02722 217 DRLVQVLVKSVEKLFGG-GDIVKHV-NLGDYVEDKVPSLKHFMSKEIKEQEYNIPSLAALSSAMRLLQRYE-FKINHGEW 293 (422)
T ss_pred HHHHHHHHHHHHHHhcC-CCeeeec-chhHHHHHhHHHHHHHhhcccccceecchhHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 89999999999999995 9999888 7653 222222221111000 00000000000 00000 011111 1
Q ss_pred HhCCCCCchHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCCCCccccC--C---CCcch
Q psy15609 432 FLGMSDHTLPAIMKLID--MHLPLPKDDWAQEQTDKLRKKLTDVLADDGVLIFPSCPCPATYHYTTFFR--P---YNFAY 504 (567)
Q Consensus 432 ~~~~s~~~~~~~~~l~~--~~~s~~~~~~a~~~r~~l~~~~~~ll~~~dvLL~Pt~p~~Ap~~~~~~~~--~---~~~~y 504 (567)
.....+...+.+...++ ..++..+|.++++.|.++++++.++|+++|+||+||+|.+||.++..... . ..+.|
T Consensus 294 ~~~~~~~~~~~v~~~~~~g~~~s~~~y~~a~~~r~~~~~~~~~~~~~~D~Ll~Pt~p~~ap~~~~~~~~~~~~~~~~~~~ 373 (422)
T PLN02722 294 ITAVKPEFGPGISERIWEAVRTTEEKIDACQSVKTELRAALTTLLGEFGVLVIPTVPGPPPKLQADPTTLESFRARAFSL 373 (422)
T ss_pred HHhhhhhCCHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCCCCcccCcchHHHHHHHHHHh
Confidence 11111112244554333 78899999999999999999999999999999999999999988642111 1 12357
Q ss_pred hHhhHhhCCCeEEEcCCCCCCCCceEEEEEcCCCChHHHHHHHHHHHH
Q psy15609 505 WAIFNVLGFPVVNVPVGLSKDGLPLGVQIVATTNNDKLCIDVANYLEK 552 (567)
Q Consensus 505 T~l~NllGlPaisVP~G~~~~GLPvGvQvVg~~~~D~~lLavA~~lE~ 552 (567)
|.++|++|+|+++||+|++ +|||+||||||++++|+.||++|+.|..
T Consensus 374 t~~~nl~G~PaisvP~g~~-~glPvGlqivg~~~~D~~lL~~a~~l~~ 420 (422)
T PLN02722 374 LSIAGVSGFCQVSIPLGLH-DNLPVSVSLLAKHGSDGFLLNLVESLYG 420 (422)
T ss_pred hhcccccCCCEEEEeCCCC-CCCCEEEEEECCCCChHHHHHHHHHHHh
Confidence 8999999999999999995 7999999999999999999999999875
No 32
>KOG1211|consensus
Probab=100.00 E-value=1.2e-72 Score=593.37 Aligned_cols=437 Identities=22% Similarity=0.327 Sum_probs=342.8
Q ss_pred HHcCCCCHHHHHHHHHHHhccCCCCchhhhhhhhhhhhhHHHHHcCcccEEEeCChHHHHHHHHHhhHHHHcCCCCCCCC
Q psy15609 81 IKNKAISCEEVVKIFIHRIDCKVPPQLLRKSKTKQSLVKKIEQVNSKINSVVDNRFSEALEEAKLLDKQIALDEIDFSQK 160 (567)
Q Consensus 81 i~~~~~t~~evv~a~i~ri~~~~~~~~~~~~~~~~~~~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~~~~~~~~~~~~~ 160 (567)
+.+|.+++.++++.|++|+ ...++..+.+.+. .++++.+|+++|++.+.+ ...+
T Consensus 27 l~~~~l~~~~~ie~~l~~~----------------------~~~~~~~~~i~~~-~~~~~~~a~~~~~~~~~~---~~~~ 80 (506)
T KOG1211|consen 27 LSSGLLTSKRIIESYLERI----------------------NKWKPLNAKITVI-NEEALKQAEEVTRRRKNG---MEKG 80 (506)
T ss_pred hcccccchHHHHHHHHHHH----------------------hhcccccceeeec-cHHHHHHhhhccccccCC---CcCC
Confidence 7899999999999999999 7788776666665 499999999999987766 4779
Q ss_pred CcccceEEeecCcCCCCCcC-CCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCCCCCCCCCCCCC
Q psy15609 161 PFLGVPFTSKNSTASKGLNF-SIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVFGQTNNPYNLS 239 (567)
Q Consensus 161 PL~GvPi~vKD~~~v~G~~t-t~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~G~t~NP~~~~ 239 (567)
||+||||+|||||+++|++| |+++..+.++.++.||++|++||++|||++|||||+||+|+..+.|.+||+|+|||++.
T Consensus 81 ~L~Gv~i~IKDnf~tk~~~t~t~~S~~l~~~~~p~dAtVV~~L~~aGaiilGKTnmdEfamg~~~~~s~~G~t~np~~~~ 160 (506)
T KOG1211|consen 81 PLQGVPIAIKDNFDTKDKPTTTAASWMLEHYNPPKDATVVKKLREAGAIILGKTNMDEFAMGSSGENSHYGTTRNPLSLW 160 (506)
T ss_pred CcCCceEEEeeceecCCccCCchhhhhhccCCCccccHHHHHHhhcCceEEccccHHHHhhccccccccCCccCCCCccc
Confidence 99999999999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCchhHHHhhcCCCCccccccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcceeccccCCHhhHH
Q psy15609 240 RTVGGSSGGESAIVSACGSPLGLGTDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSAGPIVKHAEDIL 319 (567)
Q Consensus 240 r~~GGSSgGsaaavaag~~~~~lGsD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~ 319 (567)
+.|||||||||++||++.+.|++|||||||+|+||++|||+|||||+|++|+.|++|++ .++|++||+||++.|+.
T Consensus 161 ~v~GGSS~GSA~aVaa~l~~~alGtDTgGSvR~PAa~~gvvG~KPT~G~~Sr~Gvip~~----~SlD~vGi~a~tv~D~~ 236 (506)
T KOG1211|consen 161 RVPGGSSSGSAAAVAAGLCDFALGTDTGGSVRVPAAYCGVVGFKPTYGRVSRFGVIPLS----NSLDTVGIFARTVYDAV 236 (506)
T ss_pred ccCCCCcchhHHHHHhccchhhccccCCCCccCcHHhcCccccccCcceecccccchhh----hcccccchhhcccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHhcCCcccCcCcccccC------------CCCCcEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHhhhcCCcEEEEe
Q psy15609 320 PFIKCLVIPEKLHQLKLDRTH------------DLKQLKVFYVEQPGDLKVSPVSGEMIGAIRKCVRALDEITEVSAEKL 387 (567)
Q Consensus 320 ~ll~v~ag~~p~~~~~l~~~~------------~l~~lrIg~~~~~g~~~~~~vd~~v~~a~~~av~~L~~~lG~~V~ev 387 (567)
.++.++.|.|+.|..++..|. +++++|+|++... .+..++.++.+.+++..+.|+.. |..+.++
T Consensus 237 ~v~~~~~g~d~~d~~t~~~p~~~~~~~~~~~~~~l~~~r~GIp~~~---~~~~~~~~v~~~~~~~~~~l~~~-~~~~~~~ 312 (506)
T KOG1211|consen 237 EVLGAIVGIDELDSTTLAQPAPFPIVLELIGSMDLSGLRIGIPKER---LVQGLSSGVLSLWEELADLLGSL-GAKVNEV 312 (506)
T ss_pred HHhhhhcCCCccCcccccCCcccccchhhcccccccccccCceeec---ccccccHHHHHHHHHHHHHhhcc-cccceee
Confidence 999999998876766555443 6788999998764 35566789999999999999995 9999999
Q ss_pred cCccchHHHHHHHHHHHhccC----cchhHHhhhcc----cccchHHHHHHHHhCCCCCchHHHH--H-HHHhCCChHHH
Q psy15609 388 ENIKQFKKSYALWRYWMTKEP----GNFARDLVNQE----GEASWWRETIKIFLGMSDHTLPAIM--K-LIDMHLPLPKD 456 (567)
Q Consensus 388 ~~lp~~~~~~~~~~~~~~~e~----~~~~~~l~~~~----~~~~~~~el~k~~~~~s~~~~~~~~--~-l~~~~~s~~~~ 456 (567)
.+|........+...-.+|. ..++.++.... ...+.+++..+..... ......+. . ++......+.+
T Consensus 313 -~lp~~~~~~~~~~~~s~~ea~s~laryd~~~~~~r~~~~~~~~~v~~~~rs~~~n-~~v~~~i~~g~~~l~~~~~~~~f 390 (506)
T KOG1211|consen 313 -SLPTTINGLCGYSLSSASEAASNLARYDGILYGHRRDFKVADEEVYALSRSFGFN-FEVKGRILSGNYILAKENDQDYF 390 (506)
T ss_pred -ecchhhhccccccccchhhhhhhHHHHHHHHhhcchhhhhccceeeeeccccccc-hhhcceeeccceehhhhhhHHHH
Confidence 98987655443321111110 01222211111 1111222221111100 00000000 0 00012223334
Q ss_pred HHHHHHHHHHHHHHH---HHhcCCcEEEecCCCCCCCCCCcc----ccCCCCcchhHhhHhhCCCeEEEcCCCCCCCCce
Q psy15609 457 DWAQEQTDKLRKKLT---DVLADDGVLIFPSCPCPATYHYTT----FFRPYNFAYWAIFNVLGFPVVNVPVGLSKDGLPL 529 (567)
Q Consensus 457 ~~a~~~r~~l~~~~~---~ll~~~dvLL~Pt~p~~Ap~~~~~----~~~~~~~~yT~l~NllGlPaisVP~G~~~~GLPv 529 (567)
..+++.|+....++. ..+++.|+++.||.|.+....-.. .....+..++.+.|+.|+|++++|+|+..+|+|+
T Consensus 391 ~~a~~~rr~i~~~~~~~~~~~~~vD~l~~pt~~~~~~~~~~~~~~~~~~~~~~~~~~~anlaGlP~isiP~G~~~~g~P~ 470 (506)
T KOG1211|consen 391 EKALEVRRLIQEDFNRRKAALEGVDYLVTPTAPPPLYREFEKETLFAVSTLDDIFTQPANLAGLPAISIPVGLKNGGLPI 470 (506)
T ss_pred HHHHHHHHHHHHhhhhcccccccCCeeeccCCCCcchhhhhhcccccccccccceeecccccCCCceEEeeeecCCCCce
Confidence 445555555555555 567789999999944333222121 1112245678999999999999999999999999
Q ss_pred EEEEEcCCCChHHHHHHHHHHHHh
Q psy15609 530 GVQIVATTNNDKLCIDVANYLEKQ 553 (567)
Q Consensus 530 GvQvVg~~~~D~~lLavA~~lE~~ 553 (567)
|+|++|..|+|..++.++.++++.
T Consensus 471 glqi~g~~~~e~~~~~l~~~~~~~ 494 (506)
T KOG1211|consen 471 GLQIMGGAFAEPTLIDLALAIGQA 494 (506)
T ss_pred EEEeecccccchHHHHHHHhhccc
Confidence 999999999999999999999876
No 33
>KOG1212|consensus
Probab=93.93 E-value=0.016 Score=63.60 Aligned_cols=146 Identities=8% Similarity=-0.244 Sum_probs=109.0
Q ss_pred CCCcCCCCcccccCCCCCCcHHHHHHHHHCCCeEEEEcCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHhhc
Q psy15609 176 KGLNFSIGLLKRKDVKGTEDAYIVERLKSAGAILLGVTNVPELCLWSETRNMVFGQTNNPYNLSRTVGGSSGGESAIVSA 255 (567)
Q Consensus 176 ~G~~tt~Gs~~~~~~~a~~da~~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~G~t~NP~~~~r~~GGSSgGsaaavaa 255 (567)
.++.-|..........+.-++.-.+.|..|||.++|.++-- .|..-...+..+...++|...+.+.+|++++.. +.
T Consensus 184 n~v~G~T~NP~d~~rt~GGSSGGEaALigaggS~lGiGsDi-gGSiRiPa~f~Gl~GlKPT~~r~~~~G~~~~~~---g~ 259 (560)
T KOG1212|consen 184 NPVYGTTKNPYDLSRTPGGSSGGEAALLGAGGSLLGIGSDI-GGSIRIPAAFCGLFGLKPTPGRVSVKGHHPSVP---GR 259 (560)
T ss_pred CCCCCCCCChhhccCCCCCCchHHHHHHhCCcceecccccc-CCceeechhhccccccCCCCCeeeecCcCCCCC---cc
Confidence 34444444555556778889999999999999999998877 665556666778888999999999999999977 45
Q ss_pred CCCCcccc-ccCCCccccCccccCceeeeCCCCCCcCCCCCCCCCCCCCCcceeccccCCHhhHHHHHHHhc
Q psy15609 256 CGSPLGLG-TDIGGSCRMPGFYCGVYGYKLTTGFINTKGMGFRSGKEARTMVSAGPIVKHAEDILPFIKCLV 326 (567)
Q Consensus 256 g~~~~~lG-sD~gGSIRiPA~~~Gv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~v~a 326 (567)
....+.+| .+...+.+.|...|.+.+. +..+..|...-+|....-..+.+..+++.+.-++...+..+|.
T Consensus 260 ~~~~~~~GPm~r~v~dl~~~L~~~i~~~-~~~~~~p~~~p~~~~~~~y~~~~~~~ig~~~~dg~~~~~pa~~ 330 (560)
T KOG1212|consen 260 ETIMLVIGPMTRDVEDLVLLLRLMIGDS-GPKLLDPYPVPVKFMEVFYKSSDKLVIGYYVDDGFFDPSPAMQ 330 (560)
T ss_pred cccccccCcccccHHHHHHHHHHhcCCc-cccccCCCCCCchhhhhhhhccCCccceEEecCCCCCcCHHHH
Confidence 55554444 5888999999999999999 8888888887777654333455667777775555544444443
No 34
>PF09889 DUF2116: Uncharacterized protein containing a Zn-ribbon (DUF2116); InterPro: IPR019216 This entry contains various hypothetical prokaryotic proteins whose functions are unknown. They contain a conserved zinc ribbon motif in the N-terminal part and a predicted transmembrane segment in the C-terminal part.
Probab=39.20 E-value=84 Score=24.12 Aligned_cols=15 Identities=27% Similarity=0.428 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHH
Q psy15609 16 RKKQQKRSRRQVACN 30 (567)
Q Consensus 16 ~~~~~~~~~~~~~~~ 30 (567)
|++..+|.+|+.-..
T Consensus 25 ~~~~~k~qk~~~~~~ 39 (59)
T PF09889_consen 25 REEYRKRQKRMRKTQ 39 (59)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444444444444333
No 35
>PRK09458 pspB phage shock protein B; Provisional
Probab=35.04 E-value=61 Score=26.08 Aligned_cols=56 Identities=16% Similarity=0.071 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccCC-CCcchhhhhccCHHHHHHHHHcCCCCHH
Q psy15609 33 TMFLTFVRSLVDWCIDFVFSFIYEEQKFA-LPPVENELLLQSATTVATKIKNKAISCE 89 (567)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~i~~~s~~~l~~~i~~~~~t~~ 89 (567)
+.+-.++|.++...++.++.+..+.|... +...+.+. .....+.|++++.+--|-|
T Consensus 6 l~~PliiF~ifVaPiWL~LHY~sk~~~~~~Ls~~d~~~-L~~L~~~A~rm~~RI~tLE 62 (75)
T PRK09458 6 LAIPLTIFVLFVAPIWLWLHYRSKRQGSQGLSQEEQQR-LAQLTEKAERMRERIQALE 62 (75)
T ss_pred HHHhHHHHHHHHHHHHHHHhhcccccCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 33444566666677777775544333222 44333222 2345555666655433333
No 36
>PF06667 PspB: Phage shock protein B; InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=34.01 E-value=65 Score=25.97 Aligned_cols=27 Identities=7% Similarity=-0.037 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy15609 32 LTMFLTFVRSLVDWCIDFVFSFIYEEQ 58 (567)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 (567)
++.+..+++.++...++.++.+..+.+
T Consensus 5 fl~~plivf~ifVap~WL~lHY~sk~~ 31 (75)
T PF06667_consen 5 FLFVPLIVFMIFVAPIWLILHYRSKWK 31 (75)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444455566666777777776654443
No 37
>PF06072 Herpes_US9: Alphaherpesvirus tegument protein US9; InterPro: IPR009278 This family consists of several US9 and related proteins from the Alphaherpesviruses. The function of the US9 protein is unknown although in Bovine herpesvirus 5 Us9 is essential for the anterograde spread of the virus from the olfactory mucosa to the bulb [].; GO: 0019033 viral tegument
Probab=27.84 E-value=2.2e+02 Score=21.86 Aligned_cols=23 Identities=4% Similarity=0.102 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy15609 30 NLLTMFLTFVRSLVDWCIDFVFS 52 (567)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~ 52 (567)
-+...+..++.-++..++..++.
T Consensus 35 ~v~~v~~~~~~c~~S~~lG~~~~ 57 (60)
T PF06072_consen 35 AVAIVFAVVALCVLSGGLGALVA 57 (60)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 44444444444455555544443
No 38
>PF11373 DUF3175: Protein of unknown function (DUF3175); InterPro: IPR021513 This entry is represented by Ralstonia phage RSL1, Orf186. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=27.68 E-value=56 Score=26.73 Aligned_cols=66 Identities=29% Similarity=0.390 Sum_probs=43.5
Q ss_pred CCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchhhhhccCHHHHHHHH
Q psy15609 3 VKKRDSPKTISSSRKKQQKRSRRQVACNLLTMFLTFVRSLVDWCIDFVFSFIYEEQKFALPPVENELLLQSATTVATKI 81 (567)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~i~~~s~~~l~~~i 81 (567)
|-+.+.|+.|-.|-|.-.++|+|.+.-.+ ...+.++. | +|. +...++|..+..+|+..-.+|.+.+
T Consensus 19 vF~~~dp~~IA~SLk~Sae~S~RRk~~pf--------~SAMSML~-F---YIN-RAGk~L~~~rr~~LE~AK~eLR~~f 84 (86)
T PF11373_consen 19 VFKSDDPKKIAASLKRSAEHSRRRKATPF--------RSAMSMLN-F---YIN-RAGKNLPKERRAVLERAKDELRKAF 84 (86)
T ss_pred ccCCCCHHHHHHHHHHHHHhhcccCCCch--------HHHHHHHH-H---HHh-cccccCCHHHHHHHHHHHHHHHHHh
Confidence 45778999999999999999999765332 12222211 1 122 2232499998888887777777654
No 39
>PF07782 DC_STAMP: DC-STAMP-like protein; InterPro: IPR012858 This group of sequences is similar to a region of the dendritic cell-specific transmembrane protein (DC-STAMP, Q9H295 from SWISSPROT). This is thought to be a novel receptor protein that shares no identity with other multimembrane-spanning proteins []. It is thought to have seven putative transmembrane regions [], two of which are found in the region featured in this family. DC-STAMP is also described as having potential N-linked glycosylation sites and a potential phosphorylation site for PKC [], but these are not conserved. ; GO: 0016021 integral to membrane
Probab=27.36 E-value=1.1e+02 Score=29.24 Aligned_cols=55 Identities=20% Similarity=0.471 Sum_probs=28.8
Q ss_pred CCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhh
Q psy15609 1 MPVKKRDSPKTISSSRKKQQKRSRRQVACNLLTMFLTF----VRSLVDWCIDFVFSFIY 55 (567)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 55 (567)
+|.+++...+-|....-+..++.++....+++..++.+ ++-++|..+..++..+.
T Consensus 26 LPL~~~E~~~yi~~~s~~lt~~E~~~~~~~~~~l~~~~~~~~~~~~~D~~ly~ll~~i~ 84 (191)
T PF07782_consen 26 LPLRKKERKKYIDPTSLRLTRKERKRLLRSLLFLLLHLLQWLVIIALDYLLYWLLDIIR 84 (191)
T ss_pred CCCCccccccEeccCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47777777666654444444444444555554444444 44455555555554433
No 40
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=25.79 E-value=17 Score=27.37 Aligned_cols=40 Identities=23% Similarity=0.203 Sum_probs=24.6
Q ss_pred HHHHHHHCCCeEEEEcCccccccCCCCCCCCCCCCCCCCCC
Q psy15609 198 IVERLKSAGAILLGVTNVPELCLWSETRNMVFGQTNNPYNL 238 (567)
Q Consensus 198 ~V~~Lr~aGAI~lgkTn~~E~~~~~~~~n~~~G~t~NP~~~ 238 (567)
-..+|.++|| -+-.-+.+||...|++.=..-|...+||+.
T Consensus 7 gLr~L~~aG~-~v~iM~~~eF~~CW~nFV~~~~~~F~pW~~ 46 (55)
T PF05240_consen 7 GLRRLCQAGA-QVSIMTYSEFQYCWENFVDNQGRPFQPWEK 46 (55)
T ss_dssp HHHHHHHTT--EEEE--HHHHHHHHHHCB--TT------TT
T ss_pred HHHHHHHCCC-eEEecCcHHHHHHHHHHhcCCCCCCCcchh
Confidence 4678999996 788889999999998888888888999973
No 41
>PRK03202 6-phosphofructokinase; Provisional
Probab=23.87 E-value=1.4e+02 Score=31.18 Aligned_cols=57 Identities=21% Similarity=0.360 Sum_probs=42.9
Q ss_pred hhHHHHHcCcccEEEeCChHHHHHHHHHhhHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccc
Q psy15609 118 VKKIEQVNSKINSVVDNRFSEALEEAKLLDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKR 187 (567)
Q Consensus 118 ~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~ 187 (567)
+|.+++. .+++++-.=-+..+..|..+.+. .-|.-|||-|| || |+.|...|.|...-
T Consensus 86 ~~~l~~~--~Id~Li~IGGd~s~~~a~~L~e~---------~i~vigiPkTI-DN-Dl~gtd~s~Gf~TA 142 (320)
T PRK03202 86 IENLKKL--GIDALVVIGGDGSYMGAKRLTEH---------GIPVIGLPGTI-DN-DIAGTDYTIGFDTA 142 (320)
T ss_pred HHHHHHc--CCCEEEEeCChHHHHHHHHHHhc---------CCcEEEecccc-cC-CCCCCccCcCHHHH
Confidence 4444665 48999988778889888776542 36899999999 65 77788888887543
No 42
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes []. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [, ]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains []). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react []. Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise []. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [].; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005945 6-phosphofructokinase complex; PDB: 3O8O_E 3OPY_H 1PFK_A 2PFK_D 1MTO_F 3U39_C 6PFK_A 4PFK_A 3PFK_A 3HNO_B ....
Probab=22.18 E-value=1e+02 Score=31.52 Aligned_cols=71 Identities=20% Similarity=0.379 Sum_probs=47.9
Q ss_pred hhHHHHHcCcccEEEeCChHHHHHHHHHhhHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCcccccCCCCCCcHH
Q psy15609 118 VKKIEQVNSKINSVVDNRFSEALEEAKLLDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLKRKDVKGTEDAY 197 (567)
Q Consensus 118 ~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~a~~da~ 197 (567)
+|.+++. .+++++-.=-++.+..|..+-+.. .-|.-|||-|| || |+.|..+|.|...-.+.. +.
T Consensus 85 ~~~l~~~--~Id~Li~IGG~gs~~~a~~L~~~~--------~i~vigiPkTI-DN-Di~gtd~siGf~TA~~~~----~~ 148 (282)
T PF00365_consen 85 VENLKKL--GIDALIVIGGDGSMKGAHKLSEEF--------GIPVIGIPKTI-DN-DIPGTDYSIGFDTAVNYI----AE 148 (282)
T ss_dssp HHHHHHT--TESEEEEEESHHHHHHHHHHHHHH--------HSEEEEEEEET-TS-SCTTSSS-BTHHHHHHHH----HH
T ss_pred HHHHHHh--CCCEEEEecCCCHHHHHHHHHhcC--------ceEEEEEeccc-cC-CcCCCCCCcccCchhHHH----HH
Confidence 3444654 488898877789999998886542 26899999999 55 777888888875433322 34
Q ss_pred HHHHHHH
Q psy15609 198 IVERLKS 204 (567)
Q Consensus 198 ~V~~Lr~ 204 (567)
+|..++.
T Consensus 149 ~i~~i~~ 155 (282)
T PF00365_consen 149 AIDNIKT 155 (282)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 43
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=21.76 E-value=1.9e+02 Score=30.36 Aligned_cols=62 Identities=21% Similarity=0.328 Sum_probs=45.1
Q ss_pred hhHHHHHcCcccEEEeCChHHHHHHHHHhhHHHHcCCCCCCCCCcccceEEeecCcCCCCCcCCCCccc
Q psy15609 118 VKKIEQVNSKINSVVDNRFSEALEEAKLLDKQIALDEIDFSQKPFLGVPFTSKNSTASKGLNFSIGLLK 186 (567)
Q Consensus 118 ~~~~~~~n~~lna~v~~~~~~Al~~A~~~D~~~~~~~~~~~~~PL~GvPi~vKD~~~v~G~~tt~Gs~~ 186 (567)
+|++++.| +++++.+=-++.+..|..+-+.+.+. ...-|.-|||-||-.. +.|...|.|...
T Consensus 85 ~~~l~~~~--I~~Lv~IGGd~s~~~a~~L~e~~~~~---~~~i~vigiPkTIDND--l~~td~s~Gf~T 146 (338)
T cd00363 85 AENLKKHG--IDALVVIGGDGSYTGADLLTEEWPSK---YQGFNVIGLPGTIDND--IKGTDYTIGFDT 146 (338)
T ss_pred HHHHHHhC--CCEEEEeCCHHHHHHHHHHHHHHHhc---CCCccEEEeeecccCC--CcCcccCcCHHH
Confidence 45556664 89999887788888888877665433 2457899999999444 458888888753
No 44
>PF14237 DUF4339: Domain of unknown function (DUF4339)
Probab=20.33 E-value=35 Score=24.25 Aligned_cols=21 Identities=19% Similarity=0.167 Sum_probs=17.4
Q ss_pred cCHHHHHHHHHcCCCCHHHHH
Q psy15609 72 QSATTVATKIKNKAISCEEVV 92 (567)
Q Consensus 72 ~s~~~l~~~i~~~~~t~~evv 92 (567)
.|..+|.++|++|+|++..+|
T Consensus 14 ~s~~el~~l~~~g~i~~~tlv 34 (45)
T PF14237_consen 14 FSLEELRQLISSGEIDPDTLV 34 (45)
T ss_pred cCHHHHHHHHHcCCCCCCCeE
Confidence 478899999999999986554
No 45
>PF07423 DUF1510: Protein of unknown function (DUF1510); InterPro: IPR009988 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown.
Probab=20.27 E-value=1.2e+02 Score=29.80 Aligned_cols=17 Identities=18% Similarity=0.247 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy15609 21 KRSRRQVACNLLTMFLT 37 (567)
Q Consensus 21 ~~~~~~~~~~~~~~~~~ 37 (567)
||.|-|.++++++-++.
T Consensus 8 KrRK~N~iLNiaI~IV~ 24 (217)
T PF07423_consen 8 KRRKTNKILNIAIGIVS 24 (217)
T ss_pred HhhhhhhhHHHHHHHHH
Confidence 44455666666654444
No 46
>COG1049 AcnB Aconitase B [Energy production and conversion]
Probab=20.14 E-value=40 Score=37.62 Aligned_cols=27 Identities=19% Similarity=0.170 Sum_probs=19.3
Q ss_pred CHHHHHHHHHcCCCCHHHHHHHHHHHh
Q psy15609 73 SATTVATKIKNKAISCEEVVKIFIHRI 99 (567)
Q Consensus 73 s~~~l~~~i~~~~~t~~evv~a~i~ri 99 (567)
...+++++.++|.--+.+|++.|-+.-
T Consensus 128 ~f~dv~e~ak~Gn~~Ak~Vl~SwA~ae 154 (852)
T COG1049 128 AFHDVAEKAKAGNAYAKQVLQSWADAE 154 (852)
T ss_pred hHHHHHHHHhccCHHHHHHHHHHhhhh
Confidence 356777777888777888887776543
Done!