BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1561
(285 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P21369|PNCA_ECOLI Pyrazinamidase/nicotinamidase OS=Escherichia coli (strain K12)
GN=pncA PE=3 SV=1
Length = 213
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 87/167 (52%), Gaps = 19/167 (11%)
Query: 89 NKLLD--TVNFNAVFYSLDWHPSNHVSFIDNIKLRKIHHTSTIQPEDAQTYDTVVFDGDT 146
N+L+D AV S DWHP+NH SF + Y DG
Sbjct: 34 NRLIDWCQSRGEAVIASQDWHPANHGSFASQ--------------HGVEPYTPGQLDG-- 77
Query: 147 PIRQRLWPRHCVQDSWGAELHKDLKVVDNAIKVYKGTDPEVDSYSVFWDNKKLKGTSLAK 206
+ Q WP HCVQ+S GA+LH L A +KG +P VDSYS F+DN + + TSL
Sbjct: 78 -LPQTFWPDHCVQNSEGAQLHPLLHQKAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDD 136
Query: 207 QLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGVDM 253
L ++ ++ V GLA D CV + +DA+ +GY+ +I D CRGV++
Sbjct: 137 WLRDHEIDELIVMGLATDYCVKFTVLDALQLGYKVNVITDGCRGVNI 183
>sp|P53184|PNC1_YEAST Nicotinamidase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PNC1 PE=1 SV=1
Length = 216
Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 14/179 (7%)
Query: 84 VIEPINKLLDTVN--FNAVFYSLDWHPSNHVSFIDNIKLRKIHHTSTIQPEDAQTYDTVV 141
+I PI+ L+ + ++ + + DWHPS H+SF N K + +P TY +
Sbjct: 28 LINPISDLMQDADRDWHRIVVTRDWHPSRHISFAKNHKDK--------EPYSTYTYHSPR 79
Query: 142 FDGDTPIRQRLWPRHCVQDSWGAELHKDL--KVVDNAIKVY-KGTDPEVDSYSVFWDNKK 198
D+ LWP HCV+++WG++L + +VV IK+ KG + + YS F D
Sbjct: 80 PGDDSTQEGILWPVHCVKNTWGSQLVDQIMDQVVTKHIKIVDKGFLTDREYYSAFHDIWN 139
Query: 199 LKGTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGVDMDDME 257
T + K LE +VY+ G+A + CV A+AI A +GY+T ++ D R + DD E
Sbjct: 140 FHKTDMNKYLEKHHTDEVYIVGVALEYCVKATAISAAELGYKTTVLLDYTRPIS-DDPE 197
>sp|Q9USS0|PNC1_SCHPO Nicotinamidase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=pnc1 PE=3 SV=2
Length = 220
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 21/172 (12%)
Query: 84 VIEPINKLLDT-VNFNAVFYSLDWHPSNHVSFIDNIKLRKIHHTSTIQPE----DAQTYD 138
V+ IN+LL+ ++ V + D HP +H+SF + H+ST +P + + Y
Sbjct: 31 VVPVINRLLENDYKWDTVIATKDVHPKDHLSFTTS-------HSSTPKPSGTVVNIEAYG 83
Query: 139 TVVFDGDTPIRQRLWPRHCVQDSWGAELHKDLKVVDNAIKVYKGTDPEVDSYSVFWDNKK 198
V +Q LW HCV+++ G E L + KG+D V+SYS F+D
Sbjct: 84 HVY-------KQTLWNSHCVENTPGCEFPDSLNGDRIEFVIPKGSDRLVESYSGFYDAIG 136
Query: 199 LKGTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRG 250
+ L L+ K +TDV++ G+A D+CV +A+ A Y T +I + +G
Sbjct: 137 -RDNGLKAILDKKGITDVFIAGVATDICVKETALHA-RHWYNTYIISEAVKG 186
>sp|Q88FY5|NICF_PSEPK Maleamate amidohydrolase OS=Pseudomonas putida (strain KT2440)
GN=nicF PE=1 SV=1
Length = 213
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%)
Query: 202 TSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGVDMDDMERTRN 261
TSLA L A+ V V + G + C+ ASA+DA+ G+RTI++ +C D E
Sbjct: 130 TSLAPLLHAQGVDTVVLAGCSTSGCIRASAVDAMQHGFRTIVVRECVGDRHSDPHEANLF 189
Query: 262 TILENYGSCVQSDEVLGQ 279
I YG V + + Q
Sbjct: 190 DIDSKYGDVVTRQDAMQQ 207
>sp|P94573|YWOC_BACSU Uncharacterized isochorismatase family protein YwoC OS=Bacillus
subtilis (strain 168) GN=ywoC PE=3 SV=2
Length = 189
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 201 GTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGVDMDDMERTR 260
GT L QL + + + +CG+A ++ V ++A +A +GY+ I I D ++ E T
Sbjct: 109 GTDLDLQLRRRGIDTIVLCGIATNIGVESTAREAFQLGYQQIFITDAMSTFSDEEHEATL 168
Query: 261 NTILENYGSCVQSDEVLGQ 279
I G ++E L Q
Sbjct: 169 RFIFPRIGKSRTTEEFLEQ 187
>sp|O32091|PNCA_BACSU Uncharacterized isochorismatase family protein PncA OS=Bacillus
subtilis (strain 168) GN=pncA PE=3 SV=1
Length = 183
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 151 RLWPRHCVQDSWGAELHKDLKVVDNAIKVYKGTDPEVDSYSVFWDN-KKLKGTSLAKQLE 209
RL+P H ++ + G +L+ L + +Y+ + E + Y + GT L +L
Sbjct: 66 RLFPPHNIKGTEGKDLYGKL------LPLYQKHEHEPNVYYMEKTRYSAFAGTDLELKLR 119
Query: 210 AKKVTDVYVCGLAYDVCVGASAIDAITIGYRTIL 243
+++ ++++ G+ D+CV +A+DA G+R ++
Sbjct: 120 ERQIGELHLAGVCTDICVLHTAVDAYNKGFRIVV 153
>sp|Q1MW86|STTH_STRA9 Streptothricin hydrolase OS=Streptomyces albulus GN=sttH PE=1 SV=2
Length = 276
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 202 TSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDC 247
T L L+A VT++ VCG+ ++CV A+A A+ +G+R +L D
Sbjct: 152 TGLGALLDAAGVTELAVCGVLSEMCVAATARTALELGHRVVLPHDA 197
>sp|P0ADI7|YECD_ECOLI Isochorismatase family protein YecD OS=Escherichia coli (strain
K12) GN=yecD PE=1 SV=2
Length = 188
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 37/77 (48%)
Query: 201 GTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGVDMDDMERTR 260
GT L QL + + + +CG++ ++ V ++A +A +G+ ++ ED C + +
Sbjct: 109 GTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSI 168
Query: 261 NTILENYGSCVQSDEVL 277
N I +E+L
Sbjct: 169 NHIYPRIARVRSVEEIL 185
>sp|P0ADI8|YECD_ECO57 Uncharacterized isochorismatase family protein YecD OS=Escherichia
coli O157:H7 GN=yecD PE=3 SV=2
Length = 188
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 37/77 (48%)
Query: 201 GTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGVDMDDMERTR 260
GT L QL + + + +CG++ ++ V ++A +A +G+ ++ ED C + +
Sbjct: 109 GTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSI 168
Query: 261 NTILENYGSCVQSDEVL 277
N I +E+L
Sbjct: 169 NHIYPRIARVRSVEEIL 185
>sp|C5NU54|STTH_STRNR Streptothricin hydrolase OS=Streptomyces noursei GN=sttH PE=1 SV=1
Length = 252
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 202 TSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIED 246
T L L VT++ VCG+ ++CV A+A A+ G+R +L D
Sbjct: 134 TPLGDLLTDAGVTELAVCGVLSEMCVAATARTALVRGHRVVLPHD 178
>sp|Q97TR7|Y4030_CLOAB Uncharacterized isochorismatase family protein CA_P0030
OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792
/ JCM 1419 / LMG 5710 / VKM B-1787) GN=CA_P0030 PE=3
SV=1
Length = 187
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 35/79 (44%)
Query: 201 GTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGVDMDDMERTR 260
GT L QL + + + +CG++ + V +A +A GY I +ED ++
Sbjct: 108 GTDLDLQLRRRGIDTMVLCGISTGIGVDTTAREAFQHGYNQIFVEDAMTARSREEHAYVC 167
Query: 261 NTILENYGSCVQSDEVLGQ 279
I G ++E+L Q
Sbjct: 168 KYIFPRLGRIRNTEEILEQ 186
>sp|P96654|YDDQ_BACSU Uncharacterized isochorismatase family protein YddQ OS=Bacillus
subtilis (strain 168) GN=yddQ PE=3 SV=1
Length = 180
Score = 35.0 bits (79), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 160 DSWGAELHKDLKVVDNAIKVYKGTDPEVDSYSVFWDNKKLKGTSLAKQLEAKKVTDVYVC 219
++ G E+H+ ++ ++ + K + F++ T L +L+ + V ++ VC
Sbjct: 64 NTEGVEIHESVRPLEKETVIVKHMP------NSFFN------TDLNGKLQEEGVKELVVC 111
Query: 220 GLAYDVCVGASAIDAITIGYRTILIEDCC 248
G+ +C+ A+ A+ GY ++ED C
Sbjct: 112 GMMSHMCIDATVRSAVEHGYVCQVVEDAC 140
>sp|O07081|YRDC_BACSU Uncharacterized isochorismatase family protein YrdC OS=Bacillus
subtilis (strain 168) GN=yrdC PE=3 SV=1
Length = 187
Score = 34.7 bits (78), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 196 NKKLKGTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGVDMDD 255
N GT+L + L+ ++T V + GL CV + + +G+ T LI D M D
Sbjct: 88 NSSFIGTNLEEFLKLNEITTVVITGLTTPHCVSTTTRMSGNLGFDTYLISDATAAFGMRD 147
Query: 256 MERT 259
T
Sbjct: 148 QNDT 151
>sp|P08032|SPTA1_MOUSE Spectrin alpha chain, erythrocytic 1 OS=Mus musculus GN=Spta1 PE=2
SV=3
Length = 2415
Score = 34.7 bits (78), Expect = 0.75, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 12 DVQNDFIS-GTLNLSQCSAKQNGLQALFRNDKGKIYALKDNELEETFAVFDLNQDGLIDR 70
D+ + IS GT N+ Q K NG+ F N + + A +L+ET+A+F QD +D
Sbjct: 1666 DLAQELISSGTFNIDQIEEKMNGVNERFENVQ-SLAAAHHEKLKETYALFQFFQD--LDD 1722
Query: 71 EE 72
EE
Sbjct: 1723 EE 1724
>sp|P81660|TNNC2_ANGAN Troponin C, skeletal muscle OS=Anguilla anguilla PE=1 SV=1
Length = 160
Score = 34.3 bits (77), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 19 SGTLNLSQCSAKQNGLQALFRNDKGKIYALKDNELEETFAVFDLNQDGLIDREEFA 74
SGT++ + L + R K + EL E F VFD N DG IDREEF
Sbjct: 68 SGTIDFEEF------LVMMVRQLKEDQAGKSEEELAEFFRVFDKNGDGFIDREEFG 117
>sp|C5CN80|RUTB_VARPS Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Variovorax paradoxus (strain S110) GN=rutB PE=3 SV=1
Length = 252
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 149 RQRLWPRHCVQDSWGAELHKDLKVVDNAIKVYKGTDPEVDSYSVFWDNKKLKGTSLAKQL 208
R L + + W EL ++K I V K YS F++ ++L L
Sbjct: 127 RPELAGKFLAKGGWDYELIAEMKPQPGDIVVPK------TRYSGFFN------STLDSTL 174
Query: 209 EAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCC 248
A+ + + G+A +VCV ++ DA + Y +++ED
Sbjct: 175 RARGIRHLVFTGIATNVCVESTLRDAFHLEYFAVMLEDAT 214
>sp|Q9D0E5|EFC11_MOUSE EF-hand calcium-binding domain-containing protein 11 OS=Mus
musculus GN=Efcab11 PE=2 SV=1
Length = 162
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 13 VQNDFISGTLNLSQCSAKQNG-LQALFRNDKGKIYALKDNELEETFAVFDLNQDGLIDRE 71
++ D + ++N + G L A+ R + ++Y NE+ + F FD++ G + E
Sbjct: 58 IEADAVMSSVNPNTSGVSLEGFLSAVKRKKEARLY---RNEIRQIFTAFDVHYRGFLTLE 114
Query: 72 EFAFCWNRWIKVVIEPINKLLDTVNFNAVFYSLDWHPSNHVSFID 116
+F ++R + P +L+ VF D HVSF D
Sbjct: 115 DFKRAFSRVAPKL--PARTVLE------VFREADQDSDGHVSFRD 151
>sp|Q6FFZ6|RUTB_ACIAD Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Acinetobacter sp. (strain ADP1) GN=rutB PE=3 SV=1
Length = 245
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 186 EVDSYSVFWDNKKLKGTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIE 245
E YS F++ T+L L A+ + ++ G+A +VCV ++ D + Y + ++
Sbjct: 146 EKPRYSGFFN------TALDSMLRARGIRNLVFVGIATNVCVESTLRDGFFLEYFGVALD 199
Query: 246 DCCRGVDMDDMERT 259
D C +M R
Sbjct: 200 DACYQAGPVEMHRA 213
>sp|A9KHL4|ASSY_CLOPH Argininosuccinate synthase OS=Clostridium phytofermentans (strain
ATCC 700394 / DSM 18823 / ISDg) GN=argG PE=3 SV=1
Length = 407
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 157 CVQDSWGAELH--KDLKVVDNAIKVY--KGTDPEVDSY-------SVFWDNKKLKGTSLA 205
C+ G EL ++ + A K+Y TD VD Y ++NK L GTS+A
Sbjct: 34 CIDVGQGNELDGLEERAKLSGATKLYIEHVTDEFVDEYVMPCVKAGAVYENKYLLGTSMA 93
Query: 206 KQLEAKKVTDVYVCGLAYDVCVGASA 231
+ + AKK+ +V + A +C GA+
Sbjct: 94 RPVIAKKLVEVAIKENAVAICHGATG 119
>sp|P90740|FAN1_CAEEL Fanconi-associated nuclease 1 homolog OS=Caenorhabditis elegans
GN=fan-1 PE=1 SV=1
Length = 865
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 77 WNRWIKVVIEPINKLLDTVNFNAVFYSLD-WHPSNHVSFIDNIKL 120
W +IK+ I+ + +++ T F+ FY+ D W PS+ ++F ++L
Sbjct: 213 WPYYIKITIKIMKRVISTEKFDGTFYADDFWLPSDIITFYRFVEL 257
>sp|A8IAC9|RUTB_AZOC5 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=rutB PE=3 SV=1
Length = 227
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 208 LEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCC 248
L A+ + ++ CG+A +VCV ++ D + Y IL+ED
Sbjct: 146 LRARGIRNLVFCGIATNVCVESTLRDGFHLEYFGILLEDAT 186
>sp|Q96S96|PEBP4_HUMAN Phosphatidylethanolamine-binding protein 4 OS=Homo sapiens GN=PEBP4
PE=1 SV=3
Length = 227
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 133 DAQTYDTVVFDGDTP----IRQRLWPRHCVQDSWGAELHKDLKVVDNAIKVYKGTDPEVD 188
D TY V+ D D P RQR W V D GA+L K K+ + Y+ P
Sbjct: 86 DGATYILVMVDPDAPSRAEPRQRFWRHWLVTDIKGADLKKG-KIQGQELSAYQAPSPPAH 144
Query: 189 S 189
S
Sbjct: 145 S 145
>sp|P58760|RUTB_AGRT5 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=rutB PE=3 SV=1
Length = 228
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 190 YSVFWDNKKLKGTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCR 249
YS F++ T++ L A+ + ++ G+A +VCV +S DA + Y +++ED
Sbjct: 135 YSGFFN------TNMDSVLRARGIRNLVFVGIATNVCVESSLRDAFHLEYFGVMLEDATH 188
Query: 250 GVDMDDMERT 259
+ D +++
Sbjct: 189 HLGPDFIQQA 198
>sp|B9JLT8|RUTB_AGRRK Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868)
GN=rutB PE=3 SV=1
Length = 246
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 190 YSVFWDNKKLKGTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCR 249
YS F++ T++ L A+ + ++ G+A +VCV +S DA + Y +++ED
Sbjct: 153 YSGFFN------TNMDSVLRARGIRNLVFVGIATNVCVESSLRDAFHLEYFGVMLEDATH 206
Query: 250 GVDMDDMERT 259
+ D +++
Sbjct: 207 HLGPDFIQQA 216
>sp|Q9R9I9|MYCC_BACIU Mycosubtilin synthase subunit C OS=Bacillus subtilis GN=mycC PE=3
SV=1
Length = 2609
Score = 31.6 bits (70), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 5 NSALLVIDVQNDFISGTLNLSQCSAKQNGLQALFRNDKGKIYALKDNELEETFAVFDLNQ 64
N A+L DV D + G LNL+ S + A+ D+ + K+ +T FD+
Sbjct: 133 NDAILHQDVPFDKMVGPLNLNYNSNHLPMIPAIVSLDQIHLIHFKETAASDTLFQFDIKN 192
Query: 65 DGL---IDREEFAFCWNRWIKVVIEPINKLLDTVNFN 98
D + + E A+ +++ VIE +N+L + F
Sbjct: 193 DAIHLKVTYNEQAYD-RQYMMQVIEHLNRLFSIILFQ 228
>sp|P80322|TNNC_BRALA Troponin C OS=Branchiostoma lanceolatum PE=1 SV=1
Length = 163
Score = 31.6 bits (70), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 1 IVRPNSALLVIDVQNDFISGTLNLSQCSAKQNGLQALFRNDKGKIYALKDNELEETFAVF 60
I R ++ +V D SGT++ + L+ + R + + D+EL F V
Sbjct: 50 ISREELQQMIDEVDED-ASGTIDFEEF------LEMMARAMQDSEREIPDDELRAAFRVL 102
Query: 61 DLNQDGLIDREEF 73
D N DG ID++EF
Sbjct: 103 DKNGDGFIDKDEF 115
>sp|A8K855|EFCB7_HUMAN EF-hand calcium-binding domain-containing protein 7 OS=Homo sapiens
GN=EFCAB7 PE=2 SV=1
Length = 629
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 35 QALFRNDKGKIYALKD--NELEETFAVFDLNQDGLIDREEFAF 75
Q ++R++ G+++ K+ + L + F V DL+ +GL+ EE+ F
Sbjct: 388 QLVYRDETGELFLTKEFKSTLSDIFEVIDLDGNGLLSLEEYNF 430
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,444,823
Number of Sequences: 539616
Number of extensions: 4455255
Number of successful extensions: 10668
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 10618
Number of HSP's gapped (non-prelim): 60
length of query: 285
length of database: 191,569,459
effective HSP length: 116
effective length of query: 169
effective length of database: 128,974,003
effective search space: 21796606507
effective search space used: 21796606507
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)