Your job contains 1 sequence.
>psy15610
LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL
VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKG
ADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHV
INFDLPSDVEEYVHRIGRTGRMGNLDFPFSYNQPGYGGSYGGSSSQNSNAPDWWNDK
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15610
(237 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0263231 - symbol:bel "belle" species:7227 "Drosoph... 441 2.1e-42 2
UNIPROTKB|B4E132 - symbol:DDX3Y "Uncharacterized protein"... 422 1.4e-39 1
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"... 424 1.6e-39 1
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"... 424 1.6e-39 1
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"... 425 1.7e-39 1
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"... 425 1.7e-39 1
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"... 425 1.7e-39 1
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica... 425 1.7e-39 1
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi... 425 1.7e-39 1
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po... 425 1.7e-39 1
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"... 425 1.8e-39 1
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"... 425 2.6e-39 1
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"... 422 3.6e-39 1
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica... 422 3.7e-39 1
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"... 421 4.9e-39 1
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-... 419 8.0e-39 1
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu... 419 8.1e-39 1
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 416 2.3e-38 1
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al... 411 9.4e-38 1
RGD|2314437 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box po... 401 7.7e-37 1
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo... 401 8.1e-37 1
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 389 1.4e-35 1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 387 2.6e-35 1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 374 5.4e-34 1
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ... 369 3.0e-33 1
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation... 367 3.9e-33 1
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme... 361 2.2e-32 1
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu... 357 3.9e-32 1
WB|WBGene00002244 - symbol:laf-1 species:6239 "Caenorhabd... 354 1.5e-31 1
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ... 344 1.2e-30 1
UNIPROTKB|I3LRT7 - symbol:DDX4 "Probable ATP-dependent RN... 325 2.7e-29 1
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd... 331 3.9e-29 1
UNIPROTKB|Q90ZF6 - symbol:olvas "VASA" species:8090 "Oryz... 329 5.2e-29 1
UNIPROTKB|F1NL04 - symbol:DDX4 "Uncharacterized protein" ... 326 6.3e-29 1
UNIPROTKB|F1N991 - symbol:DDX4 "Uncharacterized protein" ... 326 7.9e-29 1
UNIPROTKB|B2C6E9 - symbol:B2C6E9 "VASA" species:9337 "Tri... 328 1.0e-28 1
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN... 328 1.1e-28 1
UNIPROTKB|E2RMU5 - symbol:DDX4 "Uncharacterized protein" ... 328 1.1e-28 1
UNIPROTKB|D4ADV9 - symbol:Ddx4 "Probable ATP-dependent RN... 325 1.9e-28 1
MGI|MGI:102670 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box ... 325 2.1e-28 1
UNIPROTKB|Q4R5S7 - symbol:DDX4 "Probable ATP-dependent RN... 325 2.3e-28 1
UNIPROTKB|F1MYC6 - symbol:DDX4 "Probable ATP-dependent RN... 325 2.3e-28 1
UNIPROTKB|Q5W5U4 - symbol:DDX4 "Probable ATP-dependent RN... 325 2.3e-28 1
UNIPROTKB|D6RDK4 - symbol:DDX4 "Probable ATP-dependent RN... 324 2.7e-28 1
UNIPROTKB|Q6GWX0 - symbol:DDX4 "Probable ATP-dependent RN... 324 2.9e-28 1
UNIPROTKB|Q9NQI0 - symbol:DDX4 "Probable ATP-dependent RN... 324 2.9e-28 1
ZFIN|ZDB-GENE-990415-272 - symbol:vasa "vasa homolog" spe... 319 9.8e-28 1
RGD|1308793 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box pol... 314 3.4e-27 1
UNIPROTKB|Q64060 - symbol:Ddx4 "Probable ATP-dependent RN... 314 3.4e-27 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 284 3.0e-26 2
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 284 3.0e-26 2
GENEDB_PFALCIPARUM|PF08_0096 - symbol:PF08_0096 "RNA heli... 303 9.1e-26 1
UNIPROTKB|Q8IAU1 - symbol:PF08_0096 "RNA helicase, putati... 303 9.1e-26 1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 295 1.2e-25 1
UNIPROTKB|G5EHR3 - symbol:MGCH7_ch7g509 "ATP-dependent RN... 297 1.6e-25 1
WB|WBGene00013214 - symbol:Y54G11A.3 species:6239 "Caenor... 249 2.6e-25 3
UNIPROTKB|Q91372 - symbol:ddx4 "Probable ATP-dependent RN... 296 2.8e-25 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 275 3.7e-25 2
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 292 3.8e-25 1
DICTYBASE|DDB_G0283661 - symbol:ddx3 "DEAD/DEAH box helic... 294 4.9e-25 1
TAIR|locus:2057640 - symbol:AT2G33730 species:3702 "Arabi... 257 9.2e-25 2
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 289 1.0e-24 1
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel... 278 4.1e-24 1
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he... 278 4.1e-24 1
WB|WBGene00001598 - symbol:glh-1 species:6239 "Caenorhabd... 284 6.7e-24 1
UNIPROTKB|P34689 - symbol:glh-1 "ATP-dependent RNA helica... 284 6.7e-24 1
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 280 8.5e-24 1
WB|WBGene00001599 - symbol:glh-2 species:6239 "Caenorhabd... 284 1.0e-23 1
UNIPROTKB|Q966L9 - symbol:glh-2 "ATP-dependent RNA helica... 284 1.0e-23 1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 279 1.1e-23 1
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 278 1.3e-23 1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 280 1.4e-23 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 279 1.4e-23 1
DICTYBASE|DDB_G0287361 - symbol:ddx41 "DEAD box protein a... 279 1.8e-23 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 274 2.5e-23 1
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 279 2.6e-23 1
UNIPROTKB|B4DLW8 - symbol:DDX5 "Probable ATP-dependent RN... 274 3.3e-23 1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 274 4.9e-23 1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 274 4.9e-23 1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 274 4.9e-23 1
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 274 4.9e-23 1
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 274 4.9e-23 1
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 274 4.9e-23 1
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 274 5.0e-23 1
WB|WBGene00001600 - symbol:glh-3 species:6239 "Caenorhabd... 275 5.5e-23 1
UNIPROTKB|O01836 - symbol:glh-3 "ATP-dependent RNA helica... 275 5.5e-23 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 272 6.0e-23 1
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 274 6.1e-23 1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 273 7.3e-23 1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 273 7.3e-23 1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 273 7.3e-23 1
UNIPROTKB|E9PT29 - symbol:Ddx17 "Protein Ddx17" species:1... 273 7.3e-23 1
DICTYBASE|DDB_G0269192 - symbol:tifA "eukaryotic translat... 265 8.3e-23 1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 273 9.3e-23 1
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 273 9.4e-23 1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 273 9.5e-23 1
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 273 9.5e-23 1
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 271 9.6e-23 1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 271 1.0e-22 1
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi... 258 1.0e-22 2
WARNING: Descriptions of 784 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 441 (160.3 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 85/98 (86%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTL+FVETKKGAD LE+FL+ +PVTSIHGDRTQKEREEALR FRSG+ PILVATAV
Sbjct: 559 DSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAV 618
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL
Sbjct: 619 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 656
Score = 333 (122.3 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 70/98 (71%), Positives = 78/98 (79%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQ-EELGDEALTL 60
LA +FL YIFLA+GRVGSTSENITQ I WV E DKRS LLDLLSS E ++LTL
Sbjct: 504 LASDFLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTL 563
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
+FVETKKGAD LE+FL+ +PVTSIHGDRTQKEREEA
Sbjct: 564 IFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEA 601
Score = 39 (18.8 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 5/5 (100%), Positives = 5/5 (100%)
Query: 230 APDWW 234
APDWW
Sbjct: 792 APDWW 796
>UNIPROTKB|B4E132 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
Ensembl:ENST00000420730 Uniprot:B4E132
Length = 407
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 79/98 (80%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 186 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 245
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +V+HVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 246 AARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNL 283
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 65/98 (66%), Positives = 81/98 (82%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV++ DKRS LLD+L + G ++LTL
Sbjct: 136 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGAT-----GSDSLTL 190
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 191 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 228
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 424 (154.3 bits), Expect = 1.6e-39, P = 1.6e-39
Identities = 80/98 (81%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 418 DSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 477
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 478 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 515
Score = 340 (124.7 bits), Expect = 3.6e-30, P = 3.6e-30
Identities = 67/98 (68%), Positives = 82/98 (83%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 368 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT-----GKDSLTL 422
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 423 VFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEA 460
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 424 (154.3 bits), Expect = 1.6e-39, P = 1.6e-39
Identities = 80/98 (81%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 419 DSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 478
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 479 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 516
Score = 340 (124.7 bits), Expect = 3.7e-30, P = 3.7e-30
Identities = 67/98 (68%), Positives = 82/98 (83%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 369 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT-----GKDSLTL 423
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 424 VFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEA 461
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 425 (154.7 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 80/98 (81%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 440 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 499
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 500 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 537
Score = 343 (125.8 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 67/98 (68%), Positives = 82/98 (83%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 390 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT-----GKDSLTL 444
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 445 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 482
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 425 (154.7 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 80/98 (81%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 538
Score = 343 (125.8 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 67/98 (68%), Positives = 82/98 (83%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 391 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT-----GKDSLTL 445
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 446 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 483
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 425 (154.7 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 80/98 (81%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 538
Score = 343 (125.8 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 67/98 (68%), Positives = 82/98 (83%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 391 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT-----GKDSLTL 445
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 446 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 483
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 425 (154.7 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 80/98 (81%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 538
Score = 343 (125.8 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 67/98 (68%), Positives = 82/98 (83%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 391 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT-----GKDSLTL 445
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 446 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 483
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 425 (154.7 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 80/98 (81%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 538
Score = 340 (124.7 bits), Expect = 4.2e-30, P = 4.2e-30
Identities = 67/98 (68%), Positives = 82/98 (83%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 391 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNAT-----GKDSLTL 445
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 446 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 483
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 425 (154.7 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 80/98 (81%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 538
Score = 340 (124.7 bits), Expect = 4.2e-30, P = 4.2e-30
Identities = 67/98 (68%), Positives = 82/98 (83%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 391 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNAT-----GKDSLTL 445
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 446 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 483
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 425 (154.7 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 80/98 (81%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 442 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 501
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 502 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 539
Score = 343 (125.8 bits), Expect = 2.0e-30, P = 2.0e-30
Identities = 67/98 (68%), Positives = 82/98 (83%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 392 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT-----GKDSLTL 446
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 447 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 484
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 425 (154.7 bits), Expect = 2.6e-39, P = 2.6e-39
Identities = 80/98 (81%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 485 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 544
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 545 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 582
Score = 350 (128.3 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 68/98 (69%), Positives = 83/98 (84%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ E G ++LTL
Sbjct: 433 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT---ESGKDSLTL 489
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 490 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 527
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 422 (153.6 bits), Expect = 3.6e-39, P = 3.6e-39
Identities = 79/98 (80%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 436 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 495
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +V+HVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 496 AARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNL 533
Score = 336 (123.3 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 65/98 (66%), Positives = 81/98 (82%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV++ DKRS LLD+L + G ++LTL
Sbjct: 386 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGAT-----GSDSLTL 440
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 441 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 478
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 422 (153.6 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 79/98 (80%), Positives = 92/98 (93%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 439 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 498
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +V+HVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 499 AARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNL 536
Score = 336 (123.3 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 65/98 (66%), Positives = 81/98 (82%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV++ DKRS LLD+L + G ++LTL
Sbjct: 389 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGAT-----GSDSLTL 443
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 444 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 481
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 421 (153.3 bits), Expect = 4.9e-39, P = 4.9e-39
Identities = 79/98 (80%), Positives = 91/98 (92%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLP D+EEYVHRIGRTGR+GNL
Sbjct: 501 AARGLDISNVKHVINFDLPGDIEEYVHRIGRTGRVGNL 538
Score = 342 (125.4 bits), Expect = 2.5e-30, P = 2.5e-30
Identities = 67/98 (68%), Positives = 82/98 (83%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 391 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNAT-----GTDSLTL 445
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 446 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 483
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 419 (152.6 bits), Expect = 8.0e-39, P = 8.0e-39
Identities = 79/98 (80%), Positives = 91/98 (92%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++L LVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 439 DSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 498
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 499 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 536
Score = 336 (123.3 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 66/98 (67%), Positives = 81/98 (82%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++L L
Sbjct: 389 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNAT-----GKDSLIL 443
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 444 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 481
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 419 (152.6 bits), Expect = 8.1e-39, P = 8.1e-39
Identities = 79/98 (80%), Positives = 91/98 (92%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++L LVFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEAL +FRSG++PILVATAV
Sbjct: 440 DSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 499
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 500 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 537
Score = 336 (123.3 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 66/98 (67%), Positives = 81/98 (82%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++L L
Sbjct: 390 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNAT-----GKDSLIL 444
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+H GY TSIHGDR+Q++REEA
Sbjct: 445 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA 482
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 416 (151.5 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 90/144 (62%), Positives = 107/144 (74%)
Query: 70 DQLEDFLHHHGYPVTSIHGDRTQK----EREEAQQYTL----ISCDEALTLVFVETKKGA 121
D LED++ V S + TQK E + + + L + ++LTLVFVETKKGA
Sbjct: 427 DFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGA 486
Query: 122 DQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVI 181
D LEDFL+ GY TSIHGDR+Q++REEAL +FRSG PILVATAVAARGLDI +VKHVI
Sbjct: 487 DALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARGLDISNVKHVI 546
Query: 182 NFDLPSDVEEYVHRIGRTGRMGNL 205
NFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 547 NFDLPSDIEEYVHRIGRTGRVGNL 570
Score = 333 (122.3 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 66/98 (67%), Positives = 81/98 (82%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 423 ILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNAT-----GKDSLTL 477
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+ GY TSIHGDR+Q++REEA
Sbjct: 478 VFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEA 515
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 411 (149.7 bits), Expect = 9.4e-38, P = 9.4e-38
Identities = 78/98 (79%), Positives = 89/98 (90%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LEDFL+ GY TSIHGDR+Q++REEAL +FRSG PI+VATAV
Sbjct: 489 DSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAV 548
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 549 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 586
Score = 335 (123.0 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 66/98 (67%), Positives = 81/98 (82%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 439 ILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNAT-----GKDSLTL 493
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LEDFL+ GY TSIHGDR+Q++REEA
Sbjct: 494 VFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEA 531
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 401 (146.2 bits), Expect = 7.7e-37, P = 7.7e-37
Identities = 78/98 (79%), Positives = 87/98 (88%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LE+FL Y TSIHGDR+QK+REEAL +FRSG PILVATAV
Sbjct: 434 DSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAV 493
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 494 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 531
Score = 319 (117.4 bits), Expect = 7.6e-28, P = 7.6e-28
Identities = 65/98 (66%), Positives = 79/98 (80%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 384 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT-----GRDSLTL 438
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LE+FL Y TSIHGDR+QK+REEA
Sbjct: 439 VFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEA 476
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 401 (146.2 bits), Expect = 8.1e-37, P = 8.1e-37
Identities = 78/98 (79%), Positives = 87/98 (88%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETKKGAD LE+FL Y TSIHGDR+QK+REEAL +FRSG PILVATAV
Sbjct: 440 DSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAV 499
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AARGLDI +VKHVINFDLPSD+EEYVHRIGRTGR+GNL
Sbjct: 500 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL 537
Score = 320 (117.7 bits), Expect = 6.1e-28, P = 6.1e-28
Identities = 65/98 (66%), Positives = 79/98 (80%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL YIFLA+GRVGSTSENITQ++ WV+E DKRS LLDLL++ G ++LTL
Sbjct: 390 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT-----GKDSLTL 444
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LE+FL Y TSIHGDR+QK+REEA
Sbjct: 445 VFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEA 482
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 389 (142.0 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 75/106 (70%), Positives = 90/106 (84%)
Query: 98 AQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSG 157
AQ+ I +ALTLVFVETK+GAD LE++L +G+P TSIHGDRTQ+ERE AL+ F+SG
Sbjct: 408 AQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSG 467
Query: 158 ETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
TPILVAT VAARGLDIPHV HV+NFDLP+D+++YVHRIGRTGR G
Sbjct: 468 RTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG 513
Score = 281 (104.0 bits), Expect = 9.3e-24, P = 9.3e-24
Identities = 58/98 (59%), Positives = 77/98 (78%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEEL-GDEALTL 60
LA +FL YIFLA+GRVGS+++ I QR+ +V + DKRS L+DLL + + + G +ALTL
Sbjct: 363 LAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTL 422
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETK+GAD LE++L +G+P TSIHGDRTQ+ERE A
Sbjct: 423 VFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVA 460
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 387 (141.3 bits), Expect = 2.6e-35, P = 2.6e-35
Identities = 72/97 (74%), Positives = 87/97 (89%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
+ALTLVFVETKKGAD LE++L +G+P T+IHGDR+Q+ERE ALR F++G TPILVAT V
Sbjct: 405 QALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDV 464
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
AARGLDIPHV HV+NFDLP+D+++YVHRIGRTGR GN
Sbjct: 465 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGN 501
Score = 279 (103.3 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 57/98 (58%), Positives = 76/98 (77%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQE-ELGDEALTL 60
LA +FL YIFLA+GRVGS+++ I QR+ +V + DKRS L+DLL + + G +ALTL
Sbjct: 350 LASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTL 409
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKKGAD LE++L +G+P T+IHGDR+Q+ERE A
Sbjct: 410 VFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVA 447
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 374 (136.7 bits), Expect = 5.4e-34, P = 5.4e-34
Identities = 70/96 (72%), Positives = 85/96 (88%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
++LTLVFVETK+GAD LE++L + +P TSIHGDRTQ+ERE ALR F++G TPILVAT V
Sbjct: 408 QSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDV 467
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
AARGLDIPHV HV+NFDLP+D+++YVHRIGRTGR G
Sbjct: 468 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG 503
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 369 (135.0 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 79/143 (55%), Positives = 103/143 (72%)
Query: 70 DQLEDFLHHHGYPVTSIHGDRTQK----EREEAQQYTL--ISCDE-ALTLVFVETKKGAD 122
D L+D++ V S + TQK E +E + L +S +E LT+VF ETK+ AD
Sbjct: 398 DFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVILDLLSANENGLTIVFTETKRMAD 457
Query: 123 QLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVIN 182
L D+L+ G+P T+IHGDR+Q ERE+AL F++G PILVATAVAARGLDIP+V HVIN
Sbjct: 458 NLADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGLDIPNVSHVIN 517
Query: 183 FDLPSDVEEYVHRIGRTGRMGNL 205
+DLPSD+++YVHRIGRTGR GN+
Sbjct: 518 YDLPSDIDDYVHRIGRTGRAGNV 540
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 367 (134.2 bits), Expect = 3.9e-33, P = 3.9e-33
Identities = 87/164 (53%), Positives = 107/164 (65%)
Query: 55 DEALTLVFVETKKGADQL--EDFLHHHGY----PVTSIHGDRTQK----EREEAQQYTLI 104
+E TL+F T QL DFL + + V S + TQK E E + Y L
Sbjct: 363 EERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLD 422
Query: 105 SCD----EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETP 160
E LTL+FVETK+ AD L D+L + +P TSIHGDRTQ+ERE AL FRSG T
Sbjct: 423 ILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTS 482
Query: 161 ILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
I+VATAVA+RGLDIP+V HVIN+DLP+D+++YVHRIGRTGR GN
Sbjct: 483 IMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGN 526
Score = 280 (103.6 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 57/98 (58%), Positives = 75/98 (76%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LLA++FL Y+FL++GRVGSTSENITQ++ V++ +KRS LLD+L + L E LTL
Sbjct: 380 LLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDILHT-----LPPEGLTL 434
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
+FVETK+ AD L D+L + +P TSIHGDRTQ+ERE A
Sbjct: 435 IFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERA 472
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 361 (132.1 bits), Expect = 2.2e-32, P = 2.2e-32
Identities = 68/95 (71%), Positives = 81/95 (85%)
Query: 110 LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAA 169
LTL+FVETK+ AD L +FL + +P T+IHGDRTQ+ERE AL FRSG PILVATAVAA
Sbjct: 448 LTLIFVETKRMADALSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAA 507
Query: 170 RGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
RGLDIP+V HVIN+DLP+D+++YVHRIGRTGR GN
Sbjct: 508 RGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGN 542
Score = 283 (104.7 bits), Expect = 6.4e-24, P = 6.4e-24
Identities = 78/202 (38%), Positives = 114/202 (56%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LA++FL Y+FL++GRVGSTSENITQ++ +V++ DKRS LLD+L + G LTL
Sbjct: 396 MLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDILHTH-----GTTGLTL 450
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKG 120
+FVETK+ AD L +FL + +P T+IHGDRTQ+ERE A + L V + G
Sbjct: 451 IFVETKRMADALSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAAR-G 509
Query: 121 ADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHV 180
D + + H Y + + D + R R+G T I ATA RG + V+ +
Sbjct: 510 LD-IPNVTHVINYDLPTDIDDYVHRIG----RTGRAGNTGI--ATAFFNRG-NRGVVRDL 561
Query: 181 INF--DLPSDVEEYVHRIGRTG 200
I+ + +V ++ I R G
Sbjct: 562 IDLLKEAHQEVPSFLESIAREG 583
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 357 (130.7 bits), Expect = 3.9e-32, P = 3.9e-32
Identities = 71/112 (63%), Positives = 86/112 (76%)
Query: 93 KEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALR 152
++++ A L + + LTL+FVETK+ ADQL DFL + T+IHGDRTQ ERE AL
Sbjct: 384 QDKKSALLDLLSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALA 443
Query: 153 RFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
FRSG +LVATAVAARGLDIP+V HVIN+DLPSDV++YVHRIGRTGR GN
Sbjct: 444 AFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGN 495
Score = 280 (103.6 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 58/97 (59%), Positives = 74/97 (76%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLV 61
LA++FL YIFL++GRVGSTSENITQ++ +V+ QDK+S LLDLLS+ + + LTL+
Sbjct: 351 LARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSAST------DGLTLI 404
Query: 62 FVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
FVETK+ ADQL DFL + T+IHGDRTQ ERE A
Sbjct: 405 FVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERA 441
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 354 (129.7 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 72/116 (62%), Positives = 88/116 (75%)
Query: 94 EREEAQQYTL----ISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
E +E + Y + + D +LTLVFVETK+GA L +L+ Y V +IHGD Q ERE+
Sbjct: 474 EEDEKRSYLMDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREK 533
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
L FR+G PILVATAVAARGLDIP+VKHVIN+DLPSDV+EYVHRIGRTGR+GN+
Sbjct: 534 HLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNV 589
Score = 264 (98.0 bits), Expect = 8.2e-22, P = 8.2e-22
Identities = 56/98 (57%), Positives = 71/98 (72%)
Query: 1 LLAKEFLYR-YIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALT 59
LLA++FL Y+FLA+GRVGSTSENI Q+I WV+E +KRS L+DLL + GD +LT
Sbjct: 441 LLAQDFLKENYVFLAVGRVGSTSENIMQKIVWVEEDEKRSYLMDLLDAT-----GDSSLT 495
Query: 60 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 97
LVFVETK+GA L +L+ Y V +IHGD Q ERE+
Sbjct: 496 LVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREK 533
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 344 (126.2 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 68/103 (66%), Positives = 82/103 (79%)
Query: 103 LISCD-EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPI 161
L+S + + LTL+FVETK+ ADQL DFL + T+IHGDRTQ ERE AL F++ I
Sbjct: 405 LLSAEHKGLTLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADI 464
Query: 162 LVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
LVATAVAARGLDIP+V HVIN+DLPSD+++YVHRIGRTGR GN
Sbjct: 465 LVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGN 507
Score = 287 (106.1 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 69/136 (50%), Positives = 87/136 (63%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLV 61
LA++FL YIFL++GRVGSTSENITQRI +VD+ DK+S LLDLLS+ E G LTL+
Sbjct: 363 LARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLLSA---EHKG---LTLI 416
Query: 62 FVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKGA 121
FVETK+ ADQL DFL + T+IHGDRTQ ERE A + + L V + G
Sbjct: 417 FVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAAR-GL 475
Query: 122 DQLEDFLHHHGYPVTS 137
D + + H Y + S
Sbjct: 476 D-IPNVTHVINYDLPS 490
>UNIPROTKB|I3LRT7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00620000087942 EMBL:CU929824
Ensembl:ENSSSCT00000031627 OMA:VGDERTM Uniprot:I3LRT7
Length = 290
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 66/98 (67%), Positives = 77/98 (78%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
DE T+VFVETKK AD + FL TSIHGDR Q+ERE+AL FR G+ P+LVAT+
Sbjct: 107 DER-TMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATS 165
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
VAARGLDI +V+HVINFDLPS ++EYVHRIGRTGR GN
Sbjct: 166 VAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGN 203
Score = 187 (70.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 45/98 (45%), Positives = 61/98 (62%)
Query: 2 LAKEFLY-RYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA EFL Y+F+A+G+VG ++ Q I V + KR L+++L + +GDE T+
Sbjct: 58 LAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRN-----IGDER-TM 111
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKK AD + FL TSIHGDR Q+ERE+A
Sbjct: 112 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQA 149
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 331 (121.6 bits), Expect = 3.9e-29, P = 3.9e-29
Identities = 68/113 (60%), Positives = 81/113 (71%)
Query: 93 KEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALR 152
++R + + E L LVFVETK+GA++L FL+ SIHGD Q ERE L
Sbjct: 383 EKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLE 442
Query: 153 RFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
FRSG+ PILVATAVAARGLDIP+V+HVIN+DLP D +EYVHRIGRTGR GNL
Sbjct: 443 LFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNL 495
Score = 249 (92.7 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 79/210 (37%), Positives = 115/210 (54%)
Query: 1 LLAKEFLY-RYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALT 59
+LAK+FL YIFLA+GRVGSTSENI QR+ WV+E +KRS L+++L + E L
Sbjct: 347 VLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHSENL-----V 401
Query: 60 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETK- 118
LVFVETK+GA++L FL+ SIHGD Q ERE + L + LV
Sbjct: 402 LVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERE--RNLELFRSGQCPILVATAVAA 459
Query: 119 KGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRF-RSGETPIL-VATAV---AARGLD 173
+G D + + H Y + GD +E + R R+G L +AT+ RG+
Sbjct: 460 RGLD-IPNVRHVINY---DLPGDS-----DEYVHRIGRTGRCGNLGIATSFFNDKNRGIG 510
Query: 174 IPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+K++I + +V E++H++ GR+G
Sbjct: 511 -RDLKNLI-VESNQEVPEWLHQVAAEGRIG 538
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 329 (120.9 bits), Expect = 5.2e-29, P = 5.2e-29
Identities = 62/94 (65%), Positives = 77/94 (81%)
Query: 111 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAAR 170
T+VFVETK+ AD + FL P TSIHGDR Q+ERE+AL FRSG+ P+LVAT+VA+R
Sbjct: 436 TMVFVETKRQADFIAAFLCQEKVPTTSIHGDREQREREKALADFRSGKCPVLVATSVASR 495
Query: 171 GLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
GLDIP V+HV+NFDLP+ +++YVHRIGRTGR GN
Sbjct: 496 GLDIPDVQHVVNFDLPNTIDDYVHRIGRTGRCGN 529
Score = 179 (68.1 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 45/98 (45%), Positives = 60/98 (61%)
Query: 2 LAKEFL-YRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA +FL Y+F+A+G VG ++ Q V + +KR LLDLL + +G E T+
Sbjct: 384 LAADFLKVDYLFVAVGVVGGACTDVEQTFLQVTKFNKREQLLDLLRT-----IGSER-TM 437
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETK+ AD + FL P TSIHGDR Q+ERE+A
Sbjct: 438 VFVETKRQADFIAAFLCQEKVPTTSIHGDREQREREKA 475
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 326 (119.8 bits), Expect = 6.3e-29, P = 6.3e-29
Identities = 65/94 (69%), Positives = 76/94 (80%)
Query: 111 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAAR 170
T+VFV+TKK AD L FL P TSIHGDR Q+ERE ALR FRSG+ ILVAT+VA+R
Sbjct: 422 TMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVASR 481
Query: 171 GLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
GLDI +V+HVINFDLP+ +E+YVHRIGRTGR GN
Sbjct: 482 GLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGN 515
Score = 173 (66.0 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 52/130 (40%), Positives = 67/130 (51%)
Query: 2 LAKEFLYR-YIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA EFL YIFL IG ++ Q I V KR L+++L S E T+
Sbjct: 370 LAGEFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSKRDKLIEILQSTGGER------TM 423
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA-QQYTLISCDEALTLVFVETKK 119
VFV+TKK AD L FL P TSIHGDR Q+ERE A + + C + L V ++
Sbjct: 424 VFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKC-QILVATSVASR- 481
Query: 120 GADQLEDFLH 129
G D +E+ H
Sbjct: 482 GLD-IENVQH 490
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 326 (119.8 bits), Expect = 7.9e-29, P = 7.9e-29
Identities = 65/94 (69%), Positives = 76/94 (80%)
Query: 111 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAAR 170
T+VFV+TKK AD L FL P TSIHGDR Q+ERE ALR FRSG+ ILVAT+VA+R
Sbjct: 422 TMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVASR 481
Query: 171 GLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
GLDI +V+HVINFDLP+ +E+YVHRIGRTGR GN
Sbjct: 482 GLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGN 515
Score = 173 (66.0 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 52/130 (40%), Positives = 67/130 (51%)
Query: 2 LAKEFLYR-YIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA EFL YIFL IG ++ Q I V KR L+++L S E T+
Sbjct: 370 LAGEFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSKRDKLIEILQSTGGER------TM 423
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA-QQYTLISCDEALTLVFVETKK 119
VFV+TKK AD L FL P TSIHGDR Q+ERE A + + C + L V ++
Sbjct: 424 VFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKC-QILVATSVASR- 481
Query: 120 GADQLEDFLH 129
G D +E+ H
Sbjct: 482 GLD-IENVQH 490
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 328 (120.5 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 68/113 (60%), Positives = 81/113 (71%)
Query: 92 QKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
Q + E L + E T+VFVETKK AD + FL TSIHGDR Q+ERE+AL
Sbjct: 504 QYSKREKLVEILRNIGEERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQAL 563
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
FR G+ P+LVAT+VAARGLDI +V+HVINFDLPS ++EYVHRIGRTGR GN
Sbjct: 564 GDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGN 616
Score = 159 (61.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 40/98 (40%), Positives = 57/98 (58%)
Query: 3 AKEFLYRYIF--LAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
A EFL +A+G+VG ++ Q + V + KR L+++L + +G+E T+
Sbjct: 471 AGEFLKNLTICLVAVGQVGGACSDVQQTVLQVGQYSKREKLVEILRN-----IGEER-TM 524
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKK AD + FL TSIHGDR Q+ERE+A
Sbjct: 525 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQA 562
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 328 (120.5 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 63/94 (67%), Positives = 76/94 (80%)
Query: 111 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAAR 170
T+VFV+TKK AD + FL P TSIHGDR QKERE ALR FR+G+ P++VAT+VAAR
Sbjct: 541 TMVFVKTKKKADFIATFLCQEKVPSTSIHGDREQKERETALRDFRTGQCPVIVATSVAAR 600
Query: 171 GLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
GLDI +V +VINFD+P D++EYVHRIGRTGR GN
Sbjct: 601 GLDIENVSYVINFDIPDDIDEYVHRIGRTGRCGN 634
Score = 185 (70.2 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 44/98 (44%), Positives = 61/98 (62%)
Query: 2 LAKEFLYR-YIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA+E L Y+F+ +G+VG ++ Q + VDE K+ L+++L +E+G E T+
Sbjct: 489 LAREILKPDYLFVVVGQVGGACSDVEQMVIEVDEFGKKDKLMEIL-----QEIGSER-TM 542
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFV+TKK AD + FL P TSIHGDR QKERE A
Sbjct: 543 VFVKTKKKADFIATFLCQEKVPSTSIHGDREQKERETA 580
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 328 (120.5 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 68/113 (60%), Positives = 81/113 (71%)
Query: 92 QKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
Q + E L S + T+VFVETKK AD + FL TSIHGDR Q+ERE+AL
Sbjct: 525 QYSKREKLVEILRSIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQAL 584
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
FR G+ P+LVAT+VAARGLDI +V+HVINFDLPS ++EYVHRIGRTGR GN
Sbjct: 585 GDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGN 637
Score = 190 (71.9 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 46/98 (46%), Positives = 61/98 (62%)
Query: 2 LAKEFLY-RYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA EFL Y+F+A+G+VG ++ Q I V + KR L+++L S +GDE T+
Sbjct: 492 LAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRS-----IGDER-TM 545
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKK AD + FL TSIHGDR Q+ERE+A
Sbjct: 546 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQA 583
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 325 (119.5 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 66/98 (67%), Positives = 77/98 (78%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
DE T+VFVETKK AD + FL TSIHGDR Q+ERE+AL FR G+ P+LVAT+
Sbjct: 514 DER-TMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATS 572
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
VAARGLDI +V+HVINFDLPS ++EYVHRIGRTGR GN
Sbjct: 573 VAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGN 610
Score = 187 (70.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 45/98 (45%), Positives = 61/98 (62%)
Query: 2 LAKEFLY-RYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA EFL Y+F+A+G+VG ++ Q I V + KR L+++L + +GDE T+
Sbjct: 465 LAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKLVEILRN-----IGDER-TM 518
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKK AD + FL TSIHGDR Q+ERE+A
Sbjct: 519 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQA 556
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 325 (119.5 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 66/98 (67%), Positives = 77/98 (78%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
DE T+VFVETKK AD + FL TSIHGDR Q+ERE+AL FR G+ P+LVAT+
Sbjct: 513 DER-TMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATS 571
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
VAARGLDI +V+HVINFDLPS ++EYVHRIGRTGR GN
Sbjct: 572 VAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGN 609
Score = 183 (69.5 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 44/98 (44%), Positives = 61/98 (62%)
Query: 2 LAKEFLYR-YIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA +FL Y+F+A+G+VG ++ Q I V + KR L+++L + +GDE T+
Sbjct: 464 LAGDFLKSSYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRN-----IGDER-TM 517
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKK AD + FL TSIHGDR Q+ERE+A
Sbjct: 518 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQA 555
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 325 (119.5 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 66/98 (67%), Positives = 77/98 (78%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
DE T+VFVETKK AD + FL TSIHGDR Q+ERE+AL FR G+ P+LVAT+
Sbjct: 541 DER-TMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATS 599
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
VAARGLDI +V+HVINFDLPS ++EYVHRIGRTGR GN
Sbjct: 600 VAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGN 637
Score = 185 (70.2 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 44/98 (44%), Positives = 61/98 (62%)
Query: 2 LAKEFLY-RYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA EFL Y+F+A+G+VG ++ Q + V + KR L+++L + +GDE T+
Sbjct: 492 LAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRN-----IGDER-TM 545
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKK AD + FL TSIHGDR Q+ERE+A
Sbjct: 546 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQA 583
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 325 (119.5 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 66/98 (67%), Positives = 77/98 (78%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
DE T+VFVETKK AD + FL TSIHGDR Q+ERE+AL FR G+ P+LVAT+
Sbjct: 542 DER-TMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATS 600
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
VAARGLDI +V+HVINFDLPS ++EYVHRIGRTGR GN
Sbjct: 601 VAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGN 638
Score = 187 (70.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 45/98 (45%), Positives = 61/98 (62%)
Query: 2 LAKEFLY-RYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA EFL Y+F+A+G+VG ++ Q I V + KR L+++L + +GDE T+
Sbjct: 493 LAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRN-----IGDER-TM 546
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKK AD + FL TSIHGDR Q+ERE+A
Sbjct: 547 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQA 584
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 325 (119.5 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 66/98 (67%), Positives = 77/98 (78%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
DE T+VFVETKK AD + FL TSIHGDR Q+ERE+AL FR G+ P+LVAT+
Sbjct: 542 DER-TMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATS 600
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
VAARGLDI +V+HVINFDLPS ++EYVHRIGRTGR GN
Sbjct: 601 VAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGN 638
Score = 187 (70.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 45/98 (45%), Positives = 61/98 (62%)
Query: 2 LAKEFLY-RYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA EFL Y+F+A+G+VG ++ Q I V + KR L+++L + +GDE T+
Sbjct: 493 LAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRN-----IGDER-TM 546
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKK AD + FL TSIHGDR Q+ERE+A
Sbjct: 547 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQA 584
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 324 (119.1 bits), Expect = 2.7e-28, P = 2.7e-28
Identities = 66/98 (67%), Positives = 77/98 (78%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
DE T+VFVETKK AD + FL TSIHGDR Q+ERE+AL FR G+ P+LVAT+
Sbjct: 520 DER-TMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATS 578
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
VAARGLDI +V+HVINFDLPS ++EYVHRIGRTGR GN
Sbjct: 579 VAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGN 616
Score = 185 (70.2 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 44/98 (44%), Positives = 61/98 (62%)
Query: 2 LAKEFLY-RYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA EFL Y+F+A+G+VG ++ Q + V + KR L+++L + +GDE T+
Sbjct: 471 LAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRN-----IGDER-TM 524
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKK AD + FL TSIHGDR Q+ERE+A
Sbjct: 525 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQA 562
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 324 (119.1 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 66/98 (67%), Positives = 77/98 (78%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
DE T+VFVETKK AD + FL TSIHGDR Q+ERE+AL FR G+ P+LVAT+
Sbjct: 538 DER-TMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATS 596
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
VAARGLDI +V+HVINFDLPS ++EYVHRIGRTGR GN
Sbjct: 597 VAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGN 634
Score = 184 (69.8 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 45/98 (45%), Positives = 60/98 (61%)
Query: 2 LAKEFLY-RYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA EFL Y+F+A+G+VG ++ Q V + KR LL++L + +GDE T+
Sbjct: 489 LAAEFLKSNYLFVAVGQVGGACRDVQQADLQVGQYSKREKLLEILRN-----IGDER-TM 542
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKK AD + FL TSIHGDR Q+ERE+A
Sbjct: 543 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQA 580
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 324 (119.1 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 66/98 (67%), Positives = 77/98 (78%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
DE T+VFVETKK AD + FL TSIHGDR Q+ERE+AL FR G+ P+LVAT+
Sbjct: 540 DER-TMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATS 598
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
VAARGLDI +V+HVINFDLPS ++EYVHRIGRTGR GN
Sbjct: 599 VAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGN 636
Score = 185 (70.2 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 44/98 (44%), Positives = 61/98 (62%)
Query: 2 LAKEFLY-RYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA EFL Y+F+A+G+VG ++ Q + V + KR L+++L + +GDE T+
Sbjct: 491 LAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRN-----IGDER-TM 544
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKK AD + FL TSIHGDR Q+ERE+A
Sbjct: 545 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQA 582
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 319 (117.4 bits), Expect = 9.8e-28, P = 9.8e-28
Identities = 66/121 (54%), Positives = 85/121 (70%)
Query: 84 TSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRT 143
T + D+ K R++ + + +E T+VFVETK+ AD + FL TSIHGDR
Sbjct: 507 TVVQVDQYSK-RDQLLELLRATGNER-TMVFVETKRSADFIATFLCQEKISTTSIHGDRE 564
Query: 144 QKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
Q+ERE+AL FR G P+LVAT+VAARGLDI V+HV+NFD+PS ++EYVHRIGRTGR G
Sbjct: 565 QREREKALSDFRLGHCPVLVATSVAARGLDIEQVQHVVNFDMPSSIDEYVHRIGRTGRCG 624
Query: 204 N 204
N
Sbjct: 625 N 625
Score = 188 (71.2 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 52/130 (40%), Positives = 69/130 (53%)
Query: 2 LAKEFL-YRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+A +FL YIFLA+G VG ++ Q + VD+ KR LL+LL + E T+
Sbjct: 480 MAADFLKVDYIFLAVGVVGGACSDVEQTVVQVDQYSKRDQLLELLRATGNER------TM 533
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA-QQYTLISCDEALTLVFVETKK 119
VFVETK+ AD + FL TSIHGDR Q+ERE+A + L C L V +
Sbjct: 534 VFVETKRSADFIATFLCQEKISTTSIHGDREQREREKALSDFRLGHCP-VLVATSVAAR- 591
Query: 120 GADQLEDFLH 129
G D +E H
Sbjct: 592 GLD-IEQVQH 600
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 314 (115.6 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 62/93 (66%), Positives = 74/93 (79%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
+VFVETKK AD + FL TSIHGDR Q+ERE+AL FR G+ P+LVAT+VAARG
Sbjct: 529 MVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARG 588
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
LDI +V+HVINF+LPS ++EYVHRIGRTGR GN
Sbjct: 589 LDIENVQHVINFNLPSTIDEYVHRIGRTGRCGN 621
Score = 170 (64.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 43/98 (43%), Positives = 59/98 (60%)
Query: 2 LAKEFLY-RYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA EFL Y+F+A+G+VG ++ Q I V K+ L+++L + +GDE +
Sbjct: 476 LAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILRN-----IGDER-PM 529
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKK AD + FL TSIHGDR Q+ERE+A
Sbjct: 530 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQA 567
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 314 (115.6 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 62/93 (66%), Positives = 74/93 (79%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
+VFVETKK AD + FL TSIHGDR Q+ERE+AL FR G+ P+LVAT+VAARG
Sbjct: 529 MVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARG 588
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
LDI +V+HVINF+LPS ++EYVHRIGRTGR GN
Sbjct: 589 LDIENVQHVINFNLPSTIDEYVHRIGRTGRCGN 621
Score = 170 (64.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 43/98 (43%), Positives = 59/98 (60%)
Query: 2 LAKEFLY-RYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA EFL Y+F+A+G+VG ++ Q I V K+ L+++L + +GDE +
Sbjct: 476 LAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILRN-----IGDER-PM 529
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFVETKK AD + FL TSIHGDR Q+ERE+A
Sbjct: 530 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQA 567
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 284 (105.0 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 54/98 (55%), Positives = 71/98 (72%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
D +VFVETKK AD + L G P IHGD+ Q+ER L F++G++PI++AT
Sbjct: 359 DNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATD 418
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
VA+RGLDI +VK+VINFD P+ +E+YVHRIGRTGR G+
Sbjct: 419 VASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGS 456
Score = 39 (18.8 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 44 LLSSPSQEELGDEALTLVFVETKKGADQL 72
+L+ P+ + GD + LV T++ A+Q+
Sbjct: 175 ILAQPNLK-YGDGPIVLVLAPTRELAEQI 202
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 284 (105.0 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 54/98 (55%), Positives = 71/98 (72%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
D +VFVETKK AD + L G P IHGD+ Q+ER L F++G++PI++AT
Sbjct: 359 DNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATD 418
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
VA+RGLDI +VK+VINFD P+ +E+YVHRIGRTGR G+
Sbjct: 419 VASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGS 456
Score = 39 (18.8 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 44 LLSSPSQEELGDEALTLVFVETKKGADQL 72
+L+ P+ + GD + LV T++ A+Q+
Sbjct: 175 ILAQPNLK-YGDGPIVLVLAPTRELAEQI 202
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 303 (111.7 bits), Expect = 9.1e-26, P = 9.1e-26
Identities = 58/99 (58%), Positives = 76/99 (76%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
+ LT++FVETK+ AD +E FL + IHGD++Q ERE AL+ F+ G ILVAT
Sbjct: 644 NNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKLFKRGIKNILVATD 703
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
VAARGLDI ++KHVINFDLPS++++Y+HRIGRTGR GN+
Sbjct: 704 VAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRAGNI 742
Score = 204 (76.9 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 44/98 (44%), Positives = 66/98 (67%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LAKE+L +Y FL +G+VGST+E I Q + +V+E++K + LL+LL+ + LT+
Sbjct: 596 VLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYLLNLLAE------NNNGLTI 649
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
+FVETK+ AD +E FL + IHGD++Q ERE A
Sbjct: 650 LFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERA 687
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 303 (111.7 bits), Expect = 9.1e-26, P = 9.1e-26
Identities = 58/99 (58%), Positives = 76/99 (76%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
+ LT++FVETK+ AD +E FL + IHGD++Q ERE AL+ F+ G ILVAT
Sbjct: 644 NNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKLFKRGIKNILVATD 703
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
VAARGLDI ++KHVINFDLPS++++Y+HRIGRTGR GN+
Sbjct: 704 VAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRAGNI 742
Score = 204 (76.9 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 44/98 (44%), Positives = 66/98 (67%)
Query: 1 LLAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+LAKE+L +Y FL +G+VGST+E I Q + +V+E++K + LL+LL+ + LT+
Sbjct: 596 VLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYLLNLLAE------NNNGLTI 649
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
+FVETK+ AD +E FL + IHGD++Q ERE A
Sbjct: 650 LFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERA 687
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 295 (108.9 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 56/97 (57%), Positives = 72/97 (74%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
D + LVF++TKKG DQ+ L G+P SIHGD++Q ER+ L FRSG++PI+ AT
Sbjct: 343 DGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATD 402
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
VAARGLD+ VK+VIN+D P +E+YVHRIGRTGR G
Sbjct: 403 VAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAG 439
Score = 139 (54.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 36/96 (37%), Positives = 54/96 (56%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
L+K+FLY + IG + I Q + + E K + L+ LL E++ D + L
Sbjct: 294 LSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLL-----EDIMDGSRIL 348
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 96
VF++TKKG DQ+ L G+P SIHGD++Q ER+
Sbjct: 349 VFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERD 384
>UNIPROTKB|G5EHR3 [details] [associations]
symbol:MGCH7_ch7g509 "ATP-dependent RNA helicase DED1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
EMBL:CM001237 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 RefSeq:XP_003720990.1 ProteinModelPortal:G5EHR3
EnsemblFungi:MGG_02762T0 GeneID:2682767 KEGG:mgr:MGG_02762
Uniprot:G5EHR3
Length = 619
Score = 297 (109.6 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 58/99 (58%), Positives = 76/99 (76%)
Query: 111 TLVFVETKKGADQLEDFLHHH-GYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAA 169
T++FV K AD+L+D+L++ P TS+H DRTQ+ERE+ALR FR+G PILV T V A
Sbjct: 389 TIIFVNNKWTADELDDYLYNECKLPCTSMHADRTQREREDALRAFRAGTAPILVTTGVTA 448
Query: 170 RGLDIPHVKHVINFDLPS-D---VEEYVHRIGRTGRMGN 204
RG+D+ +V HV+N+DLPS D +EEY HRIGRTGR+GN
Sbjct: 449 RGIDVRNVAHVVNYDLPSMDHGGIEEYTHRIGRTGRIGN 487
Score = 173 (66.0 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 51/143 (35%), Positives = 76/143 (53%)
Query: 2 LAKEFLYR-YIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSS-PSQEELGDEALT 59
LA+E L ++ L +GR GST NI Q + +K+ L DL++S P Q T
Sbjct: 337 LAREHLSEDHVQLRVGRAGSTHSNIIQTVIETAPMNKKRALNDLINSMPPQR-------T 389
Query: 60 LVFVETKKGADQLEDFLHHH-GYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETK 118
++FV K AD+L+D+L++ P TS+H DRTQ+ERE+A + L V T
Sbjct: 390 IIFVNNKWTADELDDYLYNECKLPCTSMHADRTQREREDALRAFRAGTAPILVTTGV-TA 448
Query: 119 KGADQLEDFLHHHGYPVTSI-HG 140
+G D + + H Y + S+ HG
Sbjct: 449 RGID-VRNVAHVVNYDLPSMDHG 470
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 249 (92.7 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 46/92 (50%), Positives = 63/92 (68%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
++FV++K AD L G +HG R+Q +RE +L RSGE ILVAT +A+RG
Sbjct: 342 IIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREMSLNMLRSGEVQILVATDLASRG 401
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+D+P + HV+N+D P D+EEYVHR+GRTGR G
Sbjct: 402 IDVPDITHVLNYDFPMDIEEYVHRVGRTGRAG 433
Score = 46 (21.3 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 49 SQEELGDEALTLVFVETKKGADQLEDFLH---HHGYPVTSIHGDRTQKEREEA 98
+ EE LV T++ A Q+E + ++GY ++G ++ E+ EA
Sbjct: 156 NDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGYKSVCLYGGGSRPEQVEA 208
Score = 36 (17.7 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 4/5 (80%), Positives = 5/5 (100%)
Query: 233 WWNDK 237
WWND+
Sbjct: 443 WWNDR 447
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 296 (109.3 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 58/102 (56%), Positives = 76/102 (74%)
Query: 103 LISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPIL 162
L S ++ T++FV TKK AD + +L + TSIHGDR Q +RE AL FR+G+ ++
Sbjct: 521 LKSSEKERTMIFVNTKKKADFIAGYLCQEKFSSTSIHGDREQYQRESALWDFRTGKCTVI 580
Query: 163 VATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
V TAVAARGLDI +V+HVIN+D+P +V+EYVHRIGRTGR GN
Sbjct: 581 VCTAVAARGLDIENVQHVINYDVPKEVDEYVHRIGRTGRCGN 622
Score = 146 (56.5 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 35/98 (35%), Positives = 53/98 (54%)
Query: 2 LAKEFLY-RYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA +L ++F+ +G VG ++ Q + + E K LL++L S +E T+
Sbjct: 477 LASNYLKSEHLFVVVGLVGGACSDVAQTVLEMRENGKMEKLLEILKSSEKER------TM 530
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
+FV TKK AD + +L + TSIHGDR Q +RE A
Sbjct: 531 IFVNTKKKADFIAGYLCQEKFSSTSIHGDREQYQRESA 568
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 275 (101.9 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 56/115 (48%), Positives = 75/115 (65%)
Query: 89 DRTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 148
DR K E A L D + LVF TK+ D++ +L G+P +IHGD+ Q ER+
Sbjct: 360 DRLVKHLESA----LNEKDNKI-LVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERD 414
Query: 149 EALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
L FR G+T I+VAT VAARG+D+ + HVIN+D+P ++E+YVHRIGRTGR G
Sbjct: 415 WVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGG 469
Score = 136 (52.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/96 (35%), Positives = 53/96 (55%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
L +++L I + IG + + S ITQ + +DE KR L+ L S E+ D + L
Sbjct: 322 LTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEK--DNKI-L 378
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 96
VF TK+ D++ +L G+P +IHGD+ Q ER+
Sbjct: 379 VFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERD 414
Score = 40 (19.1 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 40 CLLDLLSSPSQEEL--GDEALTLVFVETKKGADQLE 73
CL ++ +Q +L GD + LV T++ A Q++
Sbjct: 182 CLPSIVHINAQPQLQYGDGPIVLVLAPTRELAVQIQ 217
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 292 (107.8 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 55/132 (41%), Positives = 84/132 (63%)
Query: 72 LEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHH 131
LE H+ + + D +++R T +E TL+F TK+ D + +L
Sbjct: 324 LELSASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLRED 383
Query: 132 GYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEE 191
G+P +IHGD+ Q+ER+ L+ FR+G +PI+VAT VAARG+D+ + +VIN+D+P ++E+
Sbjct: 384 GWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIED 443
Query: 192 YVHRIGRTGRMG 203
YVHRIGRTGR G
Sbjct: 444 YVHRIGRTGRAG 455
Score = 145 (56.1 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA ++L I + +G + S S NITQ + V + +KR L L + SQ+ +E TL
Sbjct: 308 LAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYLETASQD---NEYKTL 364
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 96
+F TK+ D + +L G+P +IHGD+ Q+ER+
Sbjct: 365 IFASTKRMCDDITKYLREDGWPALAIHGDKDQRERD 400
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 294 (108.6 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 74/158 (46%), Positives = 96/158 (60%)
Query: 59 TLVFVET--KKGADQLEDFLHHHGYPVTSIHGDR---TQK-E---REEAQQYTL--ISC- 106
TL+F T K+ + DFL+++ + + G TQ+ E E+ Y L +S
Sbjct: 442 TLMFSATFPKQIQNLAADFLYNYIFLKVGVVGTTQNITQRIEYVVEEDKNSYLLDYLSGL 501
Query: 107 -DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVAT 165
+ L L+FVETK+ D L FL+ +P T IHGD TQ ERE AL+ FRS TP LVAT
Sbjct: 502 KSDGLCLIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQPERENALQSFRSFATPFLVAT 561
Query: 166 AVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+A+RGL I +V VINFDLP+D+ YVHRIGRTGR G
Sbjct: 562 DIASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAG 599
Score = 240 (89.5 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 54/99 (54%), Positives = 65/99 (65%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLV 61
LA +FLY YIFL +G VG+T +NITQRI +V E+DK S LLD LS L + L L+
Sbjct: 456 LAADFLYNYIFLKVGVVGTT-QNITQRIEYVVEEDKNSYLLDYLSG-----LKSDGLCLI 509
Query: 62 FVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQ 100
FVETK+ D L FL+ +P T IHGD TQ ERE A Q
Sbjct: 510 FVETKRSCDTLTYFLNQRNFPTTCIHGDLTQPERENALQ 548
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 257 (95.5 bits), Expect = 9.2e-25, Sum P(2) = 9.2e-25
Identities = 54/113 (47%), Positives = 70/113 (61%)
Query: 93 KEREE--AQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 150
KE E+ Q L E +VFV TKK D + L GY VT++HG ++Q++RE +
Sbjct: 559 KESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREIS 618
Query: 151 LRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
L FR+ +LVAT V RG+DIP V HVIN+D+P +E Y HRIGRTGR G
Sbjct: 619 LEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAG 671
Score = 145 (56.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 34/95 (35%), Positives = 56/95 (58%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLV 61
LA+++L + + IG G T++ I+Q + + E +K L LL +ELG++ +V
Sbjct: 528 LARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLL-----DELGEKT-AIV 581
Query: 62 FVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 96
FV TKK D + L GY VT++HG ++Q++RE
Sbjct: 582 FVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQRE 616
Score = 60 (26.2 bits), Expect = 9.2e-25, Sum P(2) = 9.2e-25
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 48 PSQEELGDEA-LTLVFVETKKGADQLED----FLHHHGYPVTSIHGDRTQKER 95
P EE E +V T++ A Q+E+ F H+ G+ VTSI G ++ +E+
Sbjct: 380 PMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQ 432
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 289 (106.8 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 52/97 (53%), Positives = 71/97 (73%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
D + L+FVETK+G DQ+ L G+P +IHGD+TQ ER+ L F+SG +PI+ AT
Sbjct: 409 DGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATD 468
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
VAARGLD+ +K V+N+D P+ +E+Y+HRIGRTGR G
Sbjct: 469 VAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAG 505
Score = 141 (54.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 41/99 (41%), Positives = 60/99 (60%)
Query: 2 LAKEFLYRYIFLAIGRVGST----SENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEA 57
LA++FL R + AI +GST +++I Q I V +K + LL LL ++L D +
Sbjct: 360 LARQFL-RDPYKAI--IGSTDLKANQSINQVIEIVPTPEKYNRLLTLL-----KQLMDGS 411
Query: 58 LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 96
L+FVETK+G DQ+ L G+P +IHGD+TQ ER+
Sbjct: 412 KILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERD 450
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 278 (102.9 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 50/92 (54%), Positives = 68/92 (73%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
+VF TKK D++ + L+ GY +HGD +Q+ER + ++ F++G+T +LVAT VAARG
Sbjct: 243 IVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARG 302
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP V HVINFD+P + E Y+HRIGRTGR G
Sbjct: 303 LDIPDVSHVINFDIPQNPESYIHRIGRTGRAG 334
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 278 (102.9 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 50/92 (54%), Positives = 68/92 (73%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
+VF TKK D++ + L+ GY +HGD +Q+ER + ++ F++G+T +LVAT VAARG
Sbjct: 243 IVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARG 302
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP V HVINFD+P + E Y+HRIGRTGR G
Sbjct: 303 LDIPDVSHVINFDIPQNPESYIHRIGRTGRAG 334
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 284 (105.0 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 53/94 (56%), Positives = 69/94 (73%)
Query: 111 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAAR 170
T+VFV + AD L L P +IHG R Q+ER EALR+FR+G P+L+ATAVA R
Sbjct: 609 TMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAER 668
Query: 171 GLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
GLDI V HVIN+D+P ++++Y+HRIGRTGR+GN
Sbjct: 669 GLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGN 702
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 3 AKEFLYR-YIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLS----SPSQEELGD-- 55
A+ FL Y+ +AI ++G+ ++ + Q + +K+ LL+LL S + E+ +
Sbjct: 546 ARAFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVY 605
Query: 56 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
T+VFV + AD L L P +IHG R Q+ER EA
Sbjct: 606 TKKTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEA 648
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 284 (105.0 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 53/94 (56%), Positives = 69/94 (73%)
Query: 111 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAAR 170
T+VFV + AD L L P +IHG R Q+ER EALR+FR+G P+L+ATAVA R
Sbjct: 609 TMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAER 668
Query: 171 GLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
GLDI V HVIN+D+P ++++Y+HRIGRTGR+GN
Sbjct: 669 GLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGN 702
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 3 AKEFLYR-YIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLS----SPSQEELGD-- 55
A+ FL Y+ +AI ++G+ ++ + Q + +K+ LL+LL S + E+ +
Sbjct: 546 ARAFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVY 605
Query: 56 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
T+VFV + AD L L P +IHG R Q+ER EA
Sbjct: 606 TKKTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEA 648
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 280 (103.6 bits), Expect = 8.5e-24, P = 8.5e-24
Identities = 51/94 (54%), Positives = 71/94 (75%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
E T++FVETK+ AD+L + G+P IHGD+ Q ER+ L+ F++G+TPI++AT V
Sbjct: 376 ECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDV 435
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
AARGLD+ +K VIN+D P++ E+YVHRIGRTGR
Sbjct: 436 AARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGR 469
Score = 148 (57.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 43/139 (30%), Positives = 74/139 (53%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA +F FL +G + + + NITQ + ++E K++ L++LL+ ++ E T+
Sbjct: 324 LASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELLNHIMNQK---ECKTI 380
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKG 120
+FVETK+ AD+L + G+P IHGD+ Q ER+ Q + + L +G
Sbjct: 381 IFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQ-EFKAGKTPIMLATDVAARG 439
Query: 121 ADQLED--FLHHHGYPVTS 137
D ++D F+ ++ YP S
Sbjct: 440 LD-VDDIKFVINYDYPNNS 457
>WB|WBGene00001599 [details] [associations]
symbol:glh-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 284 (105.0 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 53/94 (56%), Positives = 69/94 (73%)
Query: 111 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAAR 170
T+VFV + AD L L P +IHG R Q+ER EALR+FR+G P+L+ATAVA R
Sbjct: 820 TIVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAER 879
Query: 171 GLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
GLDI V HVIN+D+P ++++Y+HRIGRTGR+GN
Sbjct: 880 GLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGN 913
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 32/95 (33%), Positives = 46/95 (48%)
Query: 10 YIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQE---ELGDEALT---LVFV 63
YI LAI ++G+ ++ + Q D +K+ LL++L E E T +VFV
Sbjct: 765 YIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFV 824
Query: 64 ETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
+ AD L L P +IHG R Q+ER EA
Sbjct: 825 SQRAMADTLASILSSAQVPAITIHGAREQRERSEA 859
>UNIPROTKB|Q966L9 [details] [associations]
symbol:glh-2 "ATP-dependent RNA helicase glh-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 284 (105.0 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 53/94 (56%), Positives = 69/94 (73%)
Query: 111 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAAR 170
T+VFV + AD L L P +IHG R Q+ER EALR+FR+G P+L+ATAVA R
Sbjct: 820 TIVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAER 879
Query: 171 GLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
GLDI V HVIN+D+P ++++Y+HRIGRTGR+GN
Sbjct: 880 GLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGN 913
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 32/95 (33%), Positives = 46/95 (48%)
Query: 10 YIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQE---ELGDEALT---LVFV 63
YI LAI ++G+ ++ + Q D +K+ LL++L E E T +VFV
Sbjct: 765 YIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFV 824
Query: 64 ETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
+ AD L L P +IHG R Q+ER EA
Sbjct: 825 SQRAMADTLASILSSAQVPAITIHGAREQRERSEA 859
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 279 (103.3 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 58/168 (34%), Positives = 97/168 (57%)
Query: 36 DKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKER 95
D+++C+ +L + L +++ G+ L +H + + + +++R
Sbjct: 318 DRQTCMWSATWPKEVRQLASDFLNN-YIQVNIGSMDLS--ANHRITQIVEVISEFEKRDR 374
Query: 96 EEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFR 155
++ LVF TK+ AD++ FL G+P SIHGD+ Q+ER+ L F+
Sbjct: 375 MIKHLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFK 434
Query: 156 SGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+G++PI+VAT VA+RG+D+ + HVIN+D P++ E+YVHRIGRTGR G
Sbjct: 435 TGKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAG 482
Score = 150 (57.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 47/142 (33%), Positives = 72/142 (50%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA +FL YI + IG + S + ITQ + + E +KR ++ L E G++ L
Sbjct: 335 LASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEK-IMENRGNKCL-- 391
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET--- 117
VF TK+ AD++ FL G+P SIHGD+ Q+ER+ + L + + V T
Sbjct: 392 VFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERD----WVLNEFKTGKSPIMVATDVA 447
Query: 118 KKGADQLEDFLH--HHGYPVTS 137
+G D + D H ++ YP S
Sbjct: 448 SRGID-VRDITHVINYDYPNNS 468
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 278 (102.9 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 48/92 (52%), Positives = 72/92 (78%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+FV TK+ AD++ FL G+P SIHGD+ Q ER+ L +F++G++PI+VAT VA+RG
Sbjct: 378 LIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRG 437
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+D+ ++ HV+N+D P++ E+Y+HRIGRTGR G
Sbjct: 438 IDVRNITHVLNYDYPNNSEDYIHRIGRTGRAG 469
Score = 138 (53.6 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 33/96 (34%), Positives = 53/96 (55%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
+A +FL +I + IG + S + ITQ + V E +KR ++ + + + L
Sbjct: 320 MAADFLQDFIQVNIGSLDLSANHRITQIVEVVSESEKRDRMIRHMEKVMDGKDSKNKI-L 378
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 96
+FV TK+ AD++ FL G+P SIHGD+ Q ER+
Sbjct: 379 IFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERD 414
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 280 (103.6 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 69/176 (39%), Positives = 103/176 (58%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L +V+ GA LE +H+ + + +
Sbjct: 267 VDQIRPDRQTLMWSATWPKEVRQLAEDFLQ-DYVQINIGA--LELSANHNILQIVDVCME 323
Query: 90 RTQKEREEAQQYTLISCD-EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 148
+K+ + Q I + E T++FVETKK D+L + G+P IHGD++Q ER+
Sbjct: 324 N-EKDNKLIQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERD 382
Query: 149 EALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
L FRSG+ PIL+AT VA+RGLD+ VK VIN+D P+ E+YVHRIGRT R N
Sbjct: 383 WVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTN 438
Score = 154 (59.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 46/140 (32%), Positives = 75/140 (53%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL Y+ + IG + S + NI Q + E +K + L+ L+ E+ E T+
Sbjct: 290 LAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKLIQLMEEIMAEK---ENKTI 346
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
+FVETKK D+L + G+P IHGD++Q ER+ T +A L+ + +
Sbjct: 347 IFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWV--LTEFRSGKAPILIATDVASR 404
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 405 GLD-VEDVKFVINYDYPNSS 423
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 279 (103.3 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 63/172 (36%), Positives = 101/172 (58%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L +++ GA QL +H+ + + D
Sbjct: 268 VDQIRPDRQTLMWSATWPKEVRQLAEDFLK-EYIQINVGALQLS--ANHNILQIVDVCND 324
Query: 90 RTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
++++ ++S E T++FVETK+ D L + G+P IHGD+ Q+ER+
Sbjct: 325 GEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDW 384
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
L F+ G+ PIL+AT VA+RGLD+ VK VINFD P++ E+Y+HRIGRT R
Sbjct: 385 VLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTAR 436
Score = 144 (55.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 44/140 (31%), Positives = 71/140 (50%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL YI + +G + S + NI Q + ++ +K L+ LL E+ E T+
Sbjct: 291 LAEDFLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDKLIRLLEEIMSEK---ENKTI 347
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
+FVETK+ D L + G+P IHGD+ Q+ER+ +A L+ + +
Sbjct: 348 IFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNE--FKYGKAPILIATDVASR 405
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ + YP S
Sbjct: 406 GLD-VEDVKFVINFDYPNNS 424
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 279 (103.3 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 53/113 (46%), Positives = 75/113 (66%)
Query: 95 REEAQQYTLISCDEAL---TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+ EA+ L+ C + L+F E KK D + ++L SIHGD++Q ERE A+
Sbjct: 458 KPEAKIVYLLECLQKTPPPVLIFCENKKDVDDIYEYLLLKQVEAVSIHGDKSQDERESAI 517
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
+ FR G+ +LVAT VA++GLD P ++HVINFD+P ++E Y+HRIGRTGR GN
Sbjct: 518 KAFREGKKDVLVATDVASKGLDFPEIQHVINFDMPREIENYIHRIGRTGRRGN 570
Score = 114 (45.2 bits), Expect = 0.00059, P = 0.00059
Identities = 30/96 (31%), Positives = 47/96 (48%)
Query: 3 AKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVF 62
A+ L + + +GR G+ + N+TQ + +V + K LL+ L L+F
Sbjct: 428 ARSALVLPVEVNVGRAGAANLNVTQEVEFVKPEAKIVYLLECLQKTPPP-------VLIF 480
Query: 63 VETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
E KK D + ++L SIHGD++Q ERE A
Sbjct: 481 CENKKDVDDIYEYLLLKQVEAVSIHGDKSQDERESA 516
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 274 (101.5 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 67/176 (38%), Positives = 102/176 (57%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L +V+ G LE +H+ + + +
Sbjct: 262 VDQIRPDRQTLMWSATWPKEVRQLAEDFLQ-DYVQINVG--NLELSANHNILQIVDVCME 318
Query: 90 RTQKEREEAQQYTLISCD-EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 148
++K+ + Q I + E T++FVETK+ D L + G+P IHGD++Q ER+
Sbjct: 319 -SEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERD 377
Query: 149 EALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
L FRSG+ PIL+AT VA+RGLD+ VK VIN+D P+ E+YVHRIGRT R N
Sbjct: 378 WVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTN 433
Score = 142 (55.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/140 (30%), Positives = 72/140 (51%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL Y+ + +G + S + NI Q + E +K L+ L+ E+ E T+
Sbjct: 285 LAEDFLQDYVQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK---ENKTI 341
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
+FVETK+ D L + G+P IHGD++Q ER+ +A L+ + +
Sbjct: 342 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNE--FRSGKAPILIATDVASR 399
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 400 GLD-VEDVKFVINYDYPNSS 418
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 279 (103.3 bits), Expect = 2.6e-23, P = 2.6e-23
Identities = 67/169 (39%), Positives = 100/169 (59%)
Query: 38 RSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 96
R L+ + P + +L +E L +++ G+ L +H+ + + D +K +
Sbjct: 336 RQVLMWSATWPKEVRQLAEEFLNN-YIQVNIGSLSLS--ANHNILQIVDVC-DENEKLMK 391
Query: 97 EAQQYTLISCD-EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFR 155
+ T IS + E T++FVETKK D++ + G+ +IHGD++Q+ER+ L FR
Sbjct: 392 LIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFR 451
Query: 156 SGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
+G ILVAT VAARGLD+ VK VIN+D PS+ E+YVHRIGRTGR N
Sbjct: 452 NGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNN 500
Score = 164 (62.8 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 49/142 (34%), Positives = 77/142 (54%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA+EFL YI + IG + S + NI Q + DE +K L+ LL+ S E +E T+
Sbjct: 352 LAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAE---NETKTI 408
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETK-- 118
+FVETKK D++ + G+ +IHGD++Q+ER+ + L S + V T
Sbjct: 409 IFVETKKRVDEITRNISRQGWRACAIHGDKSQQERD----FVLSSFRNGRHSILVATDVA 464
Query: 119 -KGADQLED--FLHHHGYPVTS 137
+G D ++D F+ ++ YP S
Sbjct: 465 ARGLD-VDDVKFVINYDYPSNS 485
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 274 (101.5 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 64/172 (37%), Positives = 100/172 (58%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L ++ GA LE +H+ + + D
Sbjct: 187 VDQIRPDRQTLMWSATWPKEVRQLAEDFLK-DYIHINIGA--LELSANHNILQIVDVCHD 243
Query: 90 RTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+ E+ ++S E T+VFVETK+ D+L + G+P IHGD++Q+ER+
Sbjct: 244 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDW 303
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
L F+ G+ PIL+AT VA+RGLD+ VK VIN+D P+ E+Y+HRIGRT R
Sbjct: 304 VLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR 355
Score = 146 (56.5 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 45/140 (32%), Positives = 74/140 (52%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL YI + IG + S + NI Q + + +K L+ L+ E+ E T+
Sbjct: 210 LAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEK---ENKTI 266
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
VFVETK+ D+L + G+P IHGD++Q+ER+ +A L+ + +
Sbjct: 267 VFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNE--FKHGKAPILIATDVASR 324
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 325 GLD-VEDVKFVINYDYPNSS 343
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 274 (101.5 bits), Expect = 4.9e-23, P = 4.9e-23
Identities = 64/172 (37%), Positives = 100/172 (58%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L ++ GA LE +H+ + + D
Sbjct: 266 VDQIRPDRQTLMWSATWPKEVRQLAEDFLK-DYIHINIGA--LELSANHNILQIVDVCHD 322
Query: 90 RTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+ E+ ++S E T+VFVETK+ D+L + G+P IHGD++Q+ER+
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDW 382
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
L F+ G+ PIL+AT VA+RGLD+ VK VIN+D P+ E+Y+HRIGRT R
Sbjct: 383 VLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR 434
Score = 146 (56.5 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 45/140 (32%), Positives = 74/140 (52%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL YI + IG + S + NI Q + + +K L+ L+ E+ E T+
Sbjct: 289 LAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEK---ENKTI 345
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
VFVETK+ D+L + G+P IHGD++Q+ER+ +A L+ + +
Sbjct: 346 VFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNE--FKHGKAPILIATDVASR 403
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 404 GLD-VEDVKFVINYDYPNSS 422
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 274 (101.5 bits), Expect = 4.9e-23, P = 4.9e-23
Identities = 64/172 (37%), Positives = 100/172 (58%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L ++ GA LE +H+ + + D
Sbjct: 266 VDQIRPDRQTLMWSATWPKEVRQLAEDFLK-DYIHINIGA--LELSANHNILQIVDVCHD 322
Query: 90 RTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+ E+ ++S E T+VFVETK+ D+L + G+P IHGD++Q+ER+
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDW 382
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
L F+ G+ PIL+AT VA+RGLD+ VK VIN+D P+ E+Y+HRIGRT R
Sbjct: 383 VLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR 434
Score = 146 (56.5 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 45/140 (32%), Positives = 74/140 (52%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL YI + IG + S + NI Q + + +K L+ L+ E+ E T+
Sbjct: 289 LAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEK---ENKTI 345
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
VFVETK+ D+L + G+P IHGD++Q+ER+ +A L+ + +
Sbjct: 346 VFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNE--FKHGKAPILIATDVASR 403
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 404 GLD-VEDVKFVINYDYPNSS 422
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 274 (101.5 bits), Expect = 4.9e-23, P = 4.9e-23
Identities = 64/172 (37%), Positives = 100/172 (58%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L ++ GA LE +H+ + + D
Sbjct: 266 VDQIRPDRQTLMWSATWPKEVRQLAEDFLK-DYIHINIGA--LELSANHNILQIVDVCHD 322
Query: 90 RTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+ E+ ++S E T+VFVETK+ D+L + G+P IHGD++Q+ER+
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDW 382
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
L F+ G+ PIL+AT VA+RGLD+ VK VIN+D P+ E+Y+HRIGRT R
Sbjct: 383 VLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR 434
Score = 146 (56.5 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 45/140 (32%), Positives = 74/140 (52%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL YI + IG + S + NI Q + + +K L+ L+ E+ E T+
Sbjct: 289 LAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEK---ENKTI 345
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
VFVETK+ D+L + G+P IHGD++Q+ER+ +A L+ + +
Sbjct: 346 VFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNE--FKHGKAPILIATDVASR 403
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 404 GLD-VEDVKFVINYDYPNSS 422
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 274 (101.5 bits), Expect = 4.9e-23, P = 4.9e-23
Identities = 64/172 (37%), Positives = 100/172 (58%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L ++ GA LE +H+ + + D
Sbjct: 266 VDQIRPDRQTLMWSATWPKEVRQLAEDFLK-DYIHINIGA--LELSANHNILQIVDVCHD 322
Query: 90 RTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+ E+ ++S E T+VFVETK+ D+L + G+P IHGD++Q+ER+
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDW 382
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
L F+ G+ PIL+AT VA+RGLD+ VK VIN+D P+ E+Y+HRIGRT R
Sbjct: 383 VLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR 434
Score = 146 (56.5 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 45/140 (32%), Positives = 74/140 (52%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL YI + IG + S + NI Q + + +K L+ L+ E+ E T+
Sbjct: 289 LAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEK---ENKTI 345
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
VFVETK+ D+L + G+P IHGD++Q+ER+ +A L+ + +
Sbjct: 346 VFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNE--FKHGKAPILIATDVASR 403
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 404 GLD-VEDVKFVINYDYPNSS 422
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 274 (101.5 bits), Expect = 4.9e-23, P = 4.9e-23
Identities = 64/172 (37%), Positives = 100/172 (58%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L ++ GA LE +H+ + + D
Sbjct: 266 VDQIRPDRQTLMWSATWPKEVRQLAEDFLK-DYIHINIGA--LELSANHNILQIVDVCHD 322
Query: 90 RTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+ E+ ++S E T+VFVETK+ D+L + G+P IHGD++Q+ER+
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDW 382
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
L F+ G+ PIL+AT VA+RGLD+ VK VIN+D P+ E+Y+HRIGRT R
Sbjct: 383 VLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR 434
Score = 146 (56.5 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 45/140 (32%), Positives = 74/140 (52%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL YI + IG + S + NI Q + + +K L+ L+ E+ E T+
Sbjct: 289 LAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEK---ENKTI 345
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
VFVETK+ D+L + G+P IHGD++Q+ER+ +A L+ + +
Sbjct: 346 VFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNE--FKHGKAPILIATDVASR 403
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 404 GLD-VEDVKFVINYDYPNSS 422
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 274 (101.5 bits), Expect = 4.9e-23, P = 4.9e-23
Identities = 64/172 (37%), Positives = 100/172 (58%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L ++ GA LE +H+ + + D
Sbjct: 266 VDQIRPDRQTLMWSATWPKEVRQLAEDFLK-DYIHINIGA--LELSANHNILQIVDVCHD 322
Query: 90 RTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+ E+ ++S E T+VFVETK+ D+L + G+P IHGD++Q+ER+
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDW 382
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
L F+ G+ PIL+AT VA+RGLD+ VK VIN+D P+ E+Y+HRIGRT R
Sbjct: 383 VLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR 434
Score = 146 (56.5 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 45/140 (32%), Positives = 74/140 (52%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL YI + IG + S + NI Q + + +K L+ L+ E+ E T+
Sbjct: 289 LAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEK---ENKTI 345
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
VFVETK+ D+L + G+P IHGD++Q+ER+ +A L+ + +
Sbjct: 346 VFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNE--FKHGKAPILIATDVASR 403
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 404 GLD-VEDVKFVINYDYPNSS 422
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 274 (101.5 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 64/172 (37%), Positives = 100/172 (58%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L ++ GA LE +H+ + + D
Sbjct: 266 VDQIRPDRQTLMWSATWPKEVRQLAEDFLK-DYIHINIGA--LELSANHNILQIVDVCHD 322
Query: 90 RTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+ E+ ++S E T+VFVETK+ D+L + G+P IHGD++Q+ER+
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDW 382
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
L F+ G+ PIL+AT VA+RGLD+ VK VIN+D P+ E+Y+HRIGRT R
Sbjct: 383 VLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR 434
Score = 146 (56.5 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 45/140 (32%), Positives = 74/140 (52%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL YI + IG + S + NI Q + + +K L+ L+ E+ E T+
Sbjct: 289 LAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEK---ENKTI 345
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
VFVETK+ D+L + G+P IHGD++Q+ER+ +A L+ + +
Sbjct: 346 VFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNE--FKHGKAPILIATDVASR 403
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 404 GLD-VEDVKFVINYDYPNSS 422
>WB|WBGene00001600 [details] [associations]
symbol:glh-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0043186 "P granule" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA helicase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 275 (101.9 bits), Expect = 5.5e-23, P = 5.5e-23
Identities = 52/94 (55%), Positives = 68/94 (72%)
Query: 111 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAAR 170
T+VFV +K AD L + P +IHG R QKER AL+ FRSG P+L+ATAV R
Sbjct: 566 TIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVER 625
Query: 171 GLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
GLDI V HVIN+D+P+++++Y+HRIGRTGR+GN
Sbjct: 626 GLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGN 659
>UNIPROTKB|O01836 [details] [associations]
symbol:glh-3 "ATP-dependent RNA helicase glh-3"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 275 (101.9 bits), Expect = 5.5e-23, P = 5.5e-23
Identities = 52/94 (55%), Positives = 68/94 (72%)
Query: 111 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAAR 170
T+VFV +K AD L + P +IHG R QKER AL+ FRSG P+L+ATAV R
Sbjct: 566 TIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVER 625
Query: 171 GLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
GLDI V HVIN+D+P+++++Y+HRIGRTGR+GN
Sbjct: 626 GLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGN 659
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 272 (100.8 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 48/92 (52%), Positives = 66/92 (71%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+F TK+ AD + FL G+P +IHGD+ Q ER+ L FR+G++PI+VAT VA+RG
Sbjct: 373 LIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRG 432
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+D+ + HV N+D P + E+YVHRIGRTGR G
Sbjct: 433 IDVKGITHVFNYDFPGNTEDYVHRIGRTGRAG 464
Score = 145 (56.1 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 36/97 (37%), Positives = 54/97 (55%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGD-EALT 59
LA+++L YI + +G + + S NI Q + VD DKR+ L +E L D +
Sbjct: 317 LARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRA----RLGKDIEEVLKDRDNKV 372
Query: 60 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 96
L+F TK+ AD + FL G+P +IHGD+ Q ER+
Sbjct: 373 LIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERD 409
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 274 (101.5 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 64/172 (37%), Positives = 100/172 (58%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L ++ GA LE +H+ + + D
Sbjct: 323 VDQIRPDRQTLMWSATWPKEVRQLAEDFLK-DYIHINIGA--LELSANHNILQIVDVCHD 379
Query: 90 RTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+ E+ ++S E T+VFVETK+ D+L + G+P IHGD++Q+ER+
Sbjct: 380 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDW 439
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
L F+ G+ PIL+AT VA+RGLD+ VK VIN+D P+ E+Y+HRIGRT R
Sbjct: 440 VLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR 491
Score = 146 (56.5 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 45/140 (32%), Positives = 74/140 (52%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL YI + IG + S + NI Q + + +K L+ L+ E+ E T+
Sbjct: 346 LAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEK---ENKTI 402
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
VFVETK+ D+L + G+P IHGD++Q+ER+ +A L+ + +
Sbjct: 403 VFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNE--FKHGKAPILIATDVASR 460
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 461 GLD-VEDVKFVINYDYPNSS 479
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 273 (101.2 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 59/141 (41%), Positives = 85/141 (60%)
Query: 65 TKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCD-EALTLVFVETKKGADQ 123
T+ LE +H+ + + + ++K+ + Q I + E T++FVETK+ D
Sbjct: 296 TQINVGNLELSANHNILQIVDVCME-SEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDD 354
Query: 124 LEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINF 183
L + G+P IHGD++Q ER+ L FRSG+ PIL+AT VA+RGLD+ VK VIN+
Sbjct: 355 LTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINY 414
Query: 184 DLPSDVEEYVHRIGRTGRMGN 204
D P+ E+YVHRIGRT R N
Sbjct: 415 DYPNSSEDYVHRIGRTARSTN 435
Score = 137 (53.3 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL Y + +G + S + NI Q + E +K L+ L+ E+ E T+
Sbjct: 287 LAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK---ENKTI 343
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
+FVETK+ D L + G+P IHGD++Q ER+ +A L+ + +
Sbjct: 344 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNE--FRSGKAPILIATDVASR 401
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 402 GLD-VEDVKFVINYDYPNSS 420
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 273 (101.2 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 59/141 (41%), Positives = 85/141 (60%)
Query: 65 TKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCD-EALTLVFVETKKGADQ 123
T+ LE +H+ + + + ++K+ + Q I + E T++FVETK+ D
Sbjct: 296 TQINVGNLELSANHNILQIVDVCME-SEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDD 354
Query: 124 LEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINF 183
L + G+P IHGD++Q ER+ L FRSG+ PIL+AT VA+RGLD+ VK VIN+
Sbjct: 355 LTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINY 414
Query: 184 DLPSDVEEYVHRIGRTGRMGN 204
D P+ E+YVHRIGRT R N
Sbjct: 415 DYPNSSEDYVHRIGRTARSTN 435
Score = 137 (53.3 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL Y + +G + S + NI Q + E +K L+ L+ E+ E T+
Sbjct: 287 LAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK---ENKTI 343
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
+FVETK+ D L + G+P IHGD++Q ER+ +A L+ + +
Sbjct: 344 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNE--FRSGKAPILIATDVASR 401
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 402 GLD-VEDVKFVINYDYPNSS 420
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 273 (101.2 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 59/141 (41%), Positives = 85/141 (60%)
Query: 65 TKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCD-EALTLVFVETKKGADQ 123
T+ LE +H+ + + + ++K+ + Q I + E T++FVETK+ D
Sbjct: 296 TQINVGNLELSANHNILQIVDVCME-SEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDD 354
Query: 124 LEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINF 183
L + G+P IHGD++Q ER+ L FRSG+ PIL+AT VA+RGLD+ VK VIN+
Sbjct: 355 LTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINY 414
Query: 184 DLPSDVEEYVHRIGRTGRMGN 204
D P+ E+YVHRIGRT R N
Sbjct: 415 DYPNSSEDYVHRIGRTARSTN 435
Score = 137 (53.3 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL Y + +G + S + NI Q + E +K L+ L+ E+ E T+
Sbjct: 287 LAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK---ENKTI 343
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
+FVETK+ D L + G+P IHGD++Q ER+ +A L+ + +
Sbjct: 344 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNE--FRSGKAPILIATDVASR 401
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 402 GLD-VEDVKFVINYDYPNSS 420
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 273 (101.2 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 59/141 (41%), Positives = 85/141 (60%)
Query: 65 TKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCD-EALTLVFVETKKGADQ 123
T+ LE +H+ + + + ++K+ + Q I + E T++FVETK+ D
Sbjct: 295 TQINVGNLELSANHNILQIVDVCME-SEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDD 353
Query: 124 LEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINF 183
L + G+P IHGD++Q ER+ L FRSG+ PIL+AT VA+RGLD+ VK VIN+
Sbjct: 354 LTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINY 413
Query: 184 DLPSDVEEYVHRIGRTGRMGN 204
D P+ E+YVHRIGRT R N
Sbjct: 414 DYPNSSEDYVHRIGRTARSTN 434
Score = 137 (53.3 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL Y + +G + S + NI Q + E +K L+ L+ E+ E T+
Sbjct: 286 LAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK---ENKTI 342
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
+FVETK+ D L + G+P IHGD++Q ER+ +A L+ + +
Sbjct: 343 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNE--FRSGKAPILIATDVASR 400
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 401 GLD-VEDVKFVINYDYPNSS 419
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 265 (98.3 bits), Expect = 8.3e-23, P = 8.3e-23
Identities = 53/114 (46%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
E+E+ + TL ++LT+ +F TKK DQL + + + V S+HGD QKEREE
Sbjct: 253 EKEDWKFGTLCDIYDSLTITQAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREE 312
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FRSGE +L+ T + ARG+D+ V VIN+DLP D E Y+HRIGR+GR G
Sbjct: 313 IIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFG 366
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 273 (101.2 bits), Expect = 9.3e-23, P = 9.3e-23
Identities = 59/141 (41%), Positives = 85/141 (60%)
Query: 65 TKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCD-EALTLVFVETKKGADQ 123
T+ LE +H+ + + + ++K+ + Q I + E T++FVETK+ D
Sbjct: 375 TQINVGNLELSANHNILQIVDVCME-SEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDD 433
Query: 124 LEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINF 183
L + G+P IHGD++Q ER+ L FRSG+ PIL+AT VA+RGLD+ VK VIN+
Sbjct: 434 LTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINY 493
Query: 184 DLPSDVEEYVHRIGRTGRMGN 204
D P+ E+YVHRIGRT R N
Sbjct: 494 DYPNSSEDYVHRIGRTARSTN 514
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL Y + +G + S + NI Q + E +K L+ L+ E+ E T+
Sbjct: 366 LAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK---ENKTI 422
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
+FVETK+ D L + G+P IHGD++Q ER+ +A L+ + +
Sbjct: 423 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNE--FRSGKAPILIATDVASR 480
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 481 GLD-VEDVKFVINYDYPNSS 499
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 273 (101.2 bits), Expect = 9.4e-23, P = 9.4e-23
Identities = 59/141 (41%), Positives = 85/141 (60%)
Query: 65 TKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCD-EALTLVFVETKKGADQ 123
T+ LE +H+ + + + ++K+ + Q I + E T++FVETK+ D
Sbjct: 375 TQINVGNLELSANHNILQIVDVCME-SEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDD 433
Query: 124 LEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINF 183
L + G+P IHGD++Q ER+ L FRSG+ PIL+AT VA+RGLD+ VK VIN+
Sbjct: 434 LTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINY 493
Query: 184 DLPSDVEEYVHRIGRTGRMGN 204
D P+ E+YVHRIGRT R N
Sbjct: 494 DYPNSSEDYVHRIGRTARSTN 514
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL Y + +G + S + NI Q + E +K L+ L+ E+ E T+
Sbjct: 366 LAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK---ENKTI 422
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
+FVETK+ D L + G+P IHGD++Q ER+ +A L+ + +
Sbjct: 423 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNE--FRSGKAPILIATDVASR 480
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 481 GLD-VEDVKFVINYDYPNSS 499
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 273 (101.2 bits), Expect = 9.5e-23, P = 9.5e-23
Identities = 59/141 (41%), Positives = 85/141 (60%)
Query: 65 TKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCD-EALTLVFVETKKGADQ 123
T+ LE +H+ + + + ++K+ + Q I + E T++FVETK+ D
Sbjct: 377 TQINVGNLELSANHNILQIVDVCME-SEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDD 435
Query: 124 LEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINF 183
L + G+P IHGD++Q ER+ L FRSG+ PIL+AT VA+RGLD+ VK VIN+
Sbjct: 436 LTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINY 495
Query: 184 DLPSDVEEYVHRIGRTGRMGN 204
D P+ E+YVHRIGRT R N
Sbjct: 496 DYPNSSEDYVHRIGRTARSTN 516
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL Y + +G + S + NI Q + E +K L+ L+ E+ E T+
Sbjct: 368 LAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK---ENKTI 424
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
+FVETK+ D L + G+P IHGD++Q ER+ +A L+ + +
Sbjct: 425 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNE--FRSGKAPILIATDVASR 482
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 483 GLD-VEDVKFVINYDYPNSS 501
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 273 (101.2 bits), Expect = 9.5e-23, P = 9.5e-23
Identities = 59/141 (41%), Positives = 85/141 (60%)
Query: 65 TKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCD-EALTLVFVETKKGADQ 123
T+ LE +H+ + + + ++K+ + Q I + E T++FVETK+ D
Sbjct: 377 TQINVGNLELSANHNILQIVDVCME-SEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDD 435
Query: 124 LEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINF 183
L + G+P IHGD++Q ER+ L FRSG+ PIL+AT VA+RGLD+ VK VIN+
Sbjct: 436 LTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINY 495
Query: 184 DLPSDVEEYVHRIGRTGRMGN 204
D P+ E+YVHRIGRT R N
Sbjct: 496 DYPNSSEDYVHRIGRTARSTN 516
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL Y + +G + S + NI Q + E +K L+ L+ E+ E T+
Sbjct: 368 LAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK---ENKTI 424
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
+FVETK+ D L + G+P IHGD++Q ER+ +A L+ + +
Sbjct: 425 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNE--FRSGKAPILIATDVASR 482
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 483 GLD-VEDVKFVINYDYPNSS 501
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 271 (100.5 bits), Expect = 9.6e-23, P = 9.6e-23
Identities = 64/172 (37%), Positives = 99/172 (57%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L +V GA LE +H+ + + D
Sbjct: 254 VDQIRPDRQTLMWSATWPKEVRQLAEDFLK-EYVHINIGA--LELSANHNILQIVDVCHD 310
Query: 90 RTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+ ++ ++S E T+VFVETK+ D L + G+P IHGD++Q+ER+
Sbjct: 311 VEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDW 370
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
L F+ G+ PIL+AT VA+RGLD+ VK VIN+D P+ E+Y+HRIGRT R
Sbjct: 371 VLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR 422
Score = 145 (56.1 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 44/140 (31%), Positives = 73/140 (52%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL Y+ + IG + S + NI Q + + +K L+ L+ E+ E T+
Sbjct: 277 LAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEK---ENKTI 333
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
VFVETK+ D L + G+P IHGD++Q+ER+ +A L+ + +
Sbjct: 334 VFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNE--FKHGKAPILIATDVASR 391
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 392 GLD-VEDVKFVINYDYPNSS 410
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 271 (100.5 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 64/172 (37%), Positives = 99/172 (57%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L +V GA LE +H+ + + D
Sbjct: 262 VDQIRPDRQTLMWSATWPKEVRQLAEDFLK-EYVHINIGA--LELSANHNILQIVDVCHD 318
Query: 90 RTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+ ++ ++S E T+VFVETK+ D L + G+P IHGD++Q+ER+
Sbjct: 319 VEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDW 378
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
L F+ G+ PIL+AT VA+RGLD+ VK VIN+D P+ E+Y+HRIGRT R
Sbjct: 379 VLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR 430
Score = 145 (56.1 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 44/140 (31%), Positives = 73/140 (52%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL Y+ + IG + S + NI Q + + +K L+ L+ E+ E T+
Sbjct: 285 LAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEK---ENKTI 341
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
VFVETK+ D L + G+P IHGD++Q+ER+ +A L+ + +
Sbjct: 342 VFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNE--FKHGKAPILIATDVASR 399
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 400 GLD-VEDVKFVINYDYPNSS 418
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 258 (95.9 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 49/92 (53%), Positives = 67/92 (72%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
++F TK+ DQL L + +IHGD++Q ER++ L +FRSG TP+LVAT VAARG
Sbjct: 478 IIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARG 536
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LD+ ++ V+N+D P+ VE+YVHRIGRTGR G
Sbjct: 537 LDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAG 568
Score = 39 (18.8 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 15 IGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGD 55
+ V + + + W E R DLL +P+Q +G+
Sbjct: 400 VNEVPTKRQTLMYTATWPKEV--RKIAADLLVNPAQVNIGN 438
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 271 (100.5 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 51/113 (45%), Positives = 74/113 (65%)
Query: 95 REEAQQYTLISCDEAL---TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+EEA+ L+ C + L+F E K D + ++L G +IHG + Q+ER +A+
Sbjct: 412 KEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI 471
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
FR G+ +LVAT VA++GLD P ++HVIN+D+P ++E YVHRIGRTGR GN
Sbjct: 472 EAFRDGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGN 524
Score = 114 (45.2 bits), Expect = 0.00052, P = 0.00052
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 3 AKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVF 62
AK L + I + +GR G+ S ++ Q + +V E+ K LL+ L L+F
Sbjct: 382 AKSALVKPITINVGRAGAASLDVVQEVEYVKEEAKMVYLLECLQKTPPP-------VLIF 434
Query: 63 VETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
E K D + ++L G +IHG + Q+ER +A
Sbjct: 435 AEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKA 470
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 271 (100.5 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 51/113 (45%), Positives = 74/113 (65%)
Query: 95 REEAQQYTLISCDEAL---TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+EEA+ L+ C + L+F E K D + ++L G +IHG + Q+ER +A+
Sbjct: 416 KEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI 475
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
FR G+ +LVAT VA++GLD P ++HVIN+D+P ++E YVHRIGRTGR GN
Sbjct: 476 EAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGN 528
Score = 112 (44.5 bits), Expect = 0.00092, P = 0.00091
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 3 AKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVF 62
AK L + + + +GR G+ S ++ Q + +V E+ K LL+ L L+F
Sbjct: 386 AKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPP-------VLIF 438
Query: 63 VETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
E K D + ++L G +IHG + Q+ER +A
Sbjct: 439 AEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKA 474
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 271 (100.5 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 51/113 (45%), Positives = 74/113 (65%)
Query: 95 REEAQQYTLISCDEAL---TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+EEA+ L+ C + L+F E K D + ++L G +IHG + Q+ER +A+
Sbjct: 416 KEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI 475
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
FR G+ +LVAT VA++GLD P ++HVIN+D+P ++E YVHRIGRTGR GN
Sbjct: 476 EAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGN 528
Score = 112 (44.5 bits), Expect = 0.00092, P = 0.00091
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 3 AKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVF 62
AK L + + + +GR G+ S ++ Q + +V E+ K LL+ L L+F
Sbjct: 386 AKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPP-------VLIF 438
Query: 63 VETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
E K D + ++L G +IHG + Q+ER +A
Sbjct: 439 AEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKA 474
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 271 (100.5 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 51/113 (45%), Positives = 74/113 (65%)
Query: 95 REEAQQYTLISCDEAL---TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+EEA+ L+ C + L+F E K D + ++L G +IHG + Q+ER +A+
Sbjct: 416 KEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI 475
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
FR G+ +LVAT VA++GLD P ++HVIN+D+P ++E YVHRIGRTGR GN
Sbjct: 476 EAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGN 528
Score = 112 (44.5 bits), Expect = 0.00092, P = 0.00091
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 3 AKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVF 62
AK L + + + +GR G+ S ++ Q + +V E+ K LL+ L L+F
Sbjct: 386 AKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPP-------VLIF 438
Query: 63 VETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
E K D + ++L G +IHG + Q+ER +A
Sbjct: 439 AEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKA 474
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 271 (100.5 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 51/113 (45%), Positives = 74/113 (65%)
Query: 95 REEAQQYTLISCDEAL---TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+EEA+ L+ C + L+F E K D + ++L G +IHG + Q+ER +A+
Sbjct: 416 KEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI 475
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
FR G+ +LVAT VA++GLD P ++HVIN+D+P ++E YVHRIGRTGR GN
Sbjct: 476 EAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGN 528
Score = 112 (44.5 bits), Expect = 0.00092, P = 0.00091
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 3 AKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVF 62
AK L + + + +GR G+ S ++ Q + +V E+ K LL+ L L+F
Sbjct: 386 AKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPP-------VLIF 438
Query: 63 VETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
E K D + ++L G +IHG + Q+ER +A
Sbjct: 439 AEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKA 474
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 271 (100.5 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 51/113 (45%), Positives = 74/113 (65%)
Query: 95 REEAQQYTLISCDEAL---TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+EEA+ L+ C + L+F E K D + ++L G +IHG + Q+ER +A+
Sbjct: 416 KEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI 475
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
FR G+ +LVAT VA++GLD P ++HVIN+D+P ++E YVHRIGRTGR GN
Sbjct: 476 EAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGN 528
Score = 112 (44.5 bits), Expect = 0.00092, P = 0.00091
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 3 AKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVF 62
AK L + + + +GR G+ S ++ Q + +V E+ K LL+ L L+F
Sbjct: 386 AKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPP-------VLIF 438
Query: 63 VETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
E K D + ++L G +IHG + Q+ER +A
Sbjct: 439 AEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKA 474
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 51/113 (45%), Positives = 74/113 (65%)
Query: 95 REEAQQYTLISCDEAL---TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+EEA+ L+ C + L+F E K D + ++L G +IHG + Q+ER +A+
Sbjct: 434 KEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI 493
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
FR G+ +LVAT VA++GLD P ++HVIN+D+P ++E YVHRIGRTGR GN
Sbjct: 494 EAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGN 546
Score = 112 (44.5 bits), Expect = 0.00095, P = 0.00095
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 3 AKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVF 62
AK L + + + +GR G+ S ++ Q + +V E+ K LL+ L L+F
Sbjct: 404 AKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPP-------VLIF 456
Query: 63 VETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
E K D + ++L G +IHG + Q+ER +A
Sbjct: 457 AEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKA 492
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 51/113 (45%), Positives = 74/113 (65%)
Query: 95 REEAQQYTLISCDEAL---TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+EEA+ L+ C + L+F E K D + ++L G +IHG + Q+ER +A+
Sbjct: 443 KEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI 502
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
FR G+ +LVAT VA++GLD P ++HVIN+D+P ++E YVHRIGRTGR GN
Sbjct: 503 EAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGN 555
Score = 112 (44.5 bits), Expect = 0.00097, P = 0.00097
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 3 AKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVF 62
AK L + + + +GR G+ S ++ Q + +V E+ K LL+ L L+F
Sbjct: 413 AKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPP-------VLIF 465
Query: 63 VETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
E K D + ++L G +IHG + Q+ER +A
Sbjct: 466 AEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKA 501
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 270 (100.1 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 64/172 (37%), Positives = 99/172 (57%)
Query: 32 VDE-QDKRSCLLDLLSSPSQ-EELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGD 89
VD+ + R L+ + P + +L ++ L ++ GA LE +H+ + + D
Sbjct: 266 VDQIRPDRQTLMWSATWPKEVRQLAEDFLK-DYIHINIGA--LELSANHNILQIVDVCHD 322
Query: 90 RTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+ E+ ++S E T+VFVETK+ D+L + G+P IHGD++Q+ER
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGW 382
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
L F+ G+ PIL+AT VA+RGLD+ VK VIN+D P+ E+Y+HRIGRT R
Sbjct: 383 VLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR 434
Score = 143 (55.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 45/140 (32%), Positives = 73/140 (52%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL YI + IG + S + NI Q + + +K L+ L+ E+ E T+
Sbjct: 289 LAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEK---ENKTI 345
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET-KK 119
VFVETK+ D+L + G+P IHGD++Q+ER +A L+ + +
Sbjct: 346 VFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQER--GWVLNEFKHGKAPILIATDVASR 403
Query: 120 GADQLED--FLHHHGYPVTS 137
G D +ED F+ ++ YP +S
Sbjct: 404 GLD-VEDVKFVINYDYPNSS 422
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 267 (99.0 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 54/94 (57%), Positives = 64/94 (68%)
Query: 110 LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAA 169
L +VF TK+ D+L + L+ GY IHGD TQ +R ALR+F+ G +LVAT VAA
Sbjct: 243 LAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAA 302
Query: 170 RGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
RGLDI V HV NFD+P D E YVHRIGRTGR G
Sbjct: 303 RGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAG 336
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 268 (99.4 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 53/94 (56%), Positives = 63/94 (67%)
Query: 110 LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAA 169
L +VF TK+ D+L + L+ GY IHGD TQ +R LR+F+ G +LVAT VAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 170 RGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
RGLDI V HV NFD+P D E YVHRIGRTGR G
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAG 335
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 268 (99.4 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 53/94 (56%), Positives = 63/94 (67%)
Query: 110 LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAA 169
L +VF TK+ D+L + L+ GY IHGD TQ +R LR+F+ G +LVAT VAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 170 RGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
RGLDI V HV NFD+P D E YVHRIGRTGR G
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAG 335
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 268 (99.4 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 53/94 (56%), Positives = 63/94 (67%)
Query: 110 LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAA 169
L +VF TK+ D+L + L+ GY IHGD TQ +R LR+F+ G +LVAT VAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 170 RGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
RGLDI V HV NFD+P D E YVHRIGRTGR G
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAG 335
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 268 (99.4 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 53/94 (56%), Positives = 63/94 (67%)
Query: 110 LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAA 169
L +VF TK+ D+L + L+ GY IHGD TQ +R LR+F+ G +LVAT VAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 170 RGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
RGLDI V HV NFD+P D E YVHRIGRTGR G
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAG 335
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 268 (99.4 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 53/94 (56%), Positives = 63/94 (67%)
Query: 110 LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAA 169
L +VF TK+ D+L + L+ GY IHGD TQ +R LR+F+ G +LVAT VAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 170 RGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
RGLDI V HV NFD+P D E YVHRIGRTGR G
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAG 335
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 268 (99.4 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 53/94 (56%), Positives = 63/94 (67%)
Query: 110 LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAA 169
L +VF TK+ D+L + L+ GY IHGD TQ +R LR+F+ G +LVAT VAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 170 RGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
RGLDI V HV NFD+P D E YVHRIGRTGR G
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAG 335
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 267 (99.0 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 54/94 (57%), Positives = 64/94 (68%)
Query: 110 LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAA 169
L +VF TK+ D+L + L+ GY IHGD TQ +R ALR+F+ G +LVAT VAA
Sbjct: 243 LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAA 302
Query: 170 RGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
RGLDI V HV NFD+P D E YVHRIGRTGR G
Sbjct: 303 RGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAG 336
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 268 (99.4 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 53/94 (56%), Positives = 63/94 (67%)
Query: 110 LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAA 169
L +VF TK+ D+L + L+ GY IHGD TQ +R LR+F+ G +LVAT VAA
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 170 RGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
RGLDI V HV NFD+P D E YVHRIGRTGR G
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAG 335
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 268 (99.4 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 51/92 (55%), Positives = 68/92 (73%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
LVF TK GA++L ++L HG +IHG+++Q R +AL F++GE ILVAT +AARG
Sbjct: 253 LVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGEVRILVATDIAARG 312
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDI + HV+NF+LP+ E+YVHRIGRTGR G
Sbjct: 313 LDIDQLPHVVNFELPNVDEDYVHRIGRTGRAG 344
Score = 131 (51.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 45/164 (27%), Positives = 77/164 (46%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLV 61
LA + L+ + + +T E I QR+ + KR+ L L+++ + E++ LV
Sbjct: 201 LAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALLAHLITAGAWEQV------LV 254
Query: 62 FVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVE-TKKG 120
F TK GA++L ++L HG +IHG+++Q R +A E LV + +G
Sbjct: 255 FTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKA--LADFKAGEVRILVATDIAARG 312
Query: 121 ADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVA 164
D ++ H + + ++ D + R RSGE LVA
Sbjct: 313 LD-IDQLPHVVNFELPNVDEDYVHRIGRTG-RAGRSGEAISLVA 354
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 267 (99.0 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 50/113 (44%), Positives = 74/113 (65%)
Query: 95 REEAQQYTLISCDEAL---TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+EEA+ L+ C + L+F + K D + ++L G +IHG + Q+ER +A+
Sbjct: 415 KEEAKMVYLLECLQKTPPPVLIFAKKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI 474
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
FR G+ +LVAT VA++GLD P ++HVIN+D+P ++E YVHRIGRTGR GN
Sbjct: 475 EAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGN 527
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 268 (99.4 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 51/90 (56%), Positives = 67/90 (74%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
++FVETK+ D L F+ G +IHGD++Q ER+ LR FRSG++ ILVAT VAARG
Sbjct: 534 IIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARG 593
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
LD+ +K+VINFD P + E+Y+HRIGRTGR
Sbjct: 594 LDVDGIKYVINFDYPQNSEDYIHRIGRTGR 623
Score = 130 (50.8 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 37/98 (37%), Positives = 52/98 (53%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSS--PSQEELGDEAL 58
LA++FL YI + IG + S + NI Q + DE K L LLS + E G
Sbjct: 476 LAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGK--- 532
Query: 59 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 96
++FVETK+ D L F+ G +IHGD++Q ER+
Sbjct: 533 IIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERD 570
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 262 (97.3 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 53/94 (56%), Positives = 63/94 (67%)
Query: 110 LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAA 169
L +VF TK+ D+L + L+ GY IHGD +Q +R LR+F+ G ILVAT VAA
Sbjct: 242 LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAA 301
Query: 170 RGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
RGLDI V HV NFD+P D E YVHRIGRTGR G
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAG 335
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 265 (98.3 bits), Expect = 4.5e-22, P = 4.5e-22
Identities = 54/116 (46%), Positives = 74/116 (63%)
Query: 91 TQKEREEAQQYTLISCD-EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
T++E+ + L S + +VFV K AD L L G PV S+HGDR Q +R++
Sbjct: 428 TEEEKRSLVKEFLQSLSPKDKVIVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQSDRDQ 487
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AL FR+G IL+AT +AARGLD+ V HV N++ P ++EEYVHR+GRTGR G +
Sbjct: 488 ALEDFRTGRVKILIATDLAARGLDVSDVTHVYNYNFPRNIEEYVHRVGRTGRAGKI 543
Score = 126 (49.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSEN-ITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA+ +L + + + +G + + N + Q I E++KRS + + L S S ++ +
Sbjct: 396 LAQSYLKQPMIVYVGTLDLVTVNTVKQNIIVTTEEEKRSLVKEFLQSLSPKDK-----VI 450
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFV K AD L L G PV S+HGDR Q +R++A
Sbjct: 451 VFVSRKLVADDLSSDLSIQGIPVQSLHGDREQSDRDQA 488
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 258 (95.9 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 52/114 (45%), Positives = 77/114 (67%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+REE + TLI + LT+ +F T++ D L D + + V+S+HGD QK+R+E
Sbjct: 247 DREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDE 306
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FR+G T +L++T V ARGLD+P V VIN+DLP++ E Y+HRIGR+GR G
Sbjct: 307 VMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFG 360
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 258 (95.9 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 52/114 (45%), Positives = 77/114 (67%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
+REE + TLI + LT+ +F T++ D L D + + V+S+HGD QK+R+E
Sbjct: 247 DREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDE 306
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FR+G T +L++T V ARGLD+P V VIN+DLP++ E Y+HRIGR+GR G
Sbjct: 307 VMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFG 360
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 261 (96.9 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 48/112 (42%), Positives = 73/112 (65%)
Query: 95 REEAQQYTLISCDEAL---TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+EEA+ L+ C + L+F E K D + ++L G +IHG + Q+ER +A+
Sbjct: 267 KEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAI 326
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
F+ G+ +LVAT VA++GLD P ++HV+N+D+P ++E YVHRIGRTGR G
Sbjct: 327 EAFKEGKKDVLVATDVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSG 378
Score = 115 (45.5 bits), Expect = 0.00028, P = 0.00028
Identities = 46/171 (26%), Positives = 72/171 (42%)
Query: 3 AKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVF 62
AK L + I + +GR G+ S ++ Q + +V E+ K LL+ L L+F
Sbjct: 237 AKSALVKPITINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPP-------VLIF 289
Query: 63 VETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKGAD 122
E K D + ++L G +IHG + Q+ER +A + + L V +K G D
Sbjct: 290 AEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVATDVASK-GLD 348
Query: 123 QLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLD 173
H Y + + + R RSG+T I AT +G D
Sbjct: 349 -FPAIQHVVNYDMP----EEIENYVHRIGRTGRSGKTGI--ATTFINKGCD 392
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 259 (96.2 bits), Expect = 7.8e-22, P = 7.8e-22
Identities = 49/94 (52%), Positives = 67/94 (71%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
LVF+ TK GA++L +L+ G +IHG+++Q R AL F++GE ILVAT +AARG
Sbjct: 247 LVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAARG 306
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
+DIP + V+NF+LP E+YVHRIGRTGR G +
Sbjct: 307 IDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEV 340
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 259 (96.2 bits), Expect = 7.8e-22, P = 7.8e-22
Identities = 49/94 (52%), Positives = 67/94 (71%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
LVF+ TK GA++L +L+ G +IHG+++Q R AL F++GE ILVAT +AARG
Sbjct: 247 LVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAARG 306
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
+DIP + V+NF+LP E+YVHRIGRTGR G +
Sbjct: 307 IDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEV 340
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 263 (97.6 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 49/92 (53%), Positives = 68/92 (73%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
LVF TK GA++L ++L HG +IHG+++Q R +AL F++G+ I+VAT +AARG
Sbjct: 253 LVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKAGDVRIMVATDIAARG 312
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDI + HV+NF+LP+ E+YVHRIGRTGR G
Sbjct: 313 LDIDQLPHVVNFELPNVDEDYVHRIGRTGRAG 344
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 44/163 (26%), Positives = 76/163 (46%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLV 61
LA + L+ + + +T E I QR+ + KRS L L++ + E++ LV
Sbjct: 201 LAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANHKRSLLAHLITVGAWEQV------LV 254
Query: 62 FVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKGA 121
F TK GA++L ++L HG +IHG+++Q R +A + D + + +G
Sbjct: 255 FTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALA-DFKAGDVRIMVATDIAARGL 313
Query: 122 DQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVA 164
D ++ H + + ++ D + R RSGE LVA
Sbjct: 314 D-IDQLPHVVNFELPNVDEDYVHRIGRTG-RAGRSGEAISLVA 354
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 262 (97.3 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 54/116 (46%), Positives = 74/116 (63%)
Query: 91 TQKEREEAQQYTLISCD-EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
T++E+ Q L S + +VFV K AD L L G PV S+HGDR Q +RE
Sbjct: 442 TEEEKRSLFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRER 501
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AL F++G+ IL+AT +A+RGLD+ V HV N++ P ++EEYVHR+GRTGR G +
Sbjct: 502 ALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKM 557
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 2 LAKEFLYRYIFLAIGRVGSTS-ENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA +L + + +G + + + + Q I E++KRS + L S S ++ +
Sbjct: 410 LAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQSLSPKDK-----VI 464
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFV K AD L L G PV S+HGDR Q +RE A
Sbjct: 465 VFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERA 502
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 261 (96.9 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 53/115 (46%), Positives = 77/115 (66%)
Query: 89 DRTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 148
D+ +K + ++Y + L+F KK A ++E+FL + + V +IHGD +Q++R
Sbjct: 381 DKEKKLIQLLRKYNANESSDNKILIFALYKKEASRIENFLKRNRFSVAAIHGDLSQQQRT 440
Query: 149 EALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
AL F+SG++ +L+AT VAARGLDIP+VK VIN P +E+YVHRIGRTGR G
Sbjct: 441 AALSAFKSGQSNLLLATDVAARGLDIPNVKVVINLTFPLTIEDYVHRIGRTGRAG 495
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSEN--ITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALT 59
LA F+ + + +G S N ITQ + +++ DK L+ LL + E D +
Sbjct: 345 LANNFMNSPVKVTVGDRDELSANKRITQVVEVINKFDKEKKLIQLLRKYNANESSDNKI- 403
Query: 60 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
L+F KK A ++E+FL + + V +IHGD +Q++R A
Sbjct: 404 LIFALYKKEASRIENFLKRNRFSVAAIHGDLSQQQRTAA 442
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 262 (97.3 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 54/116 (46%), Positives = 74/116 (63%)
Query: 91 TQKEREEAQQYTLISCD-EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
T++E+ Q L S + +VFV K AD L L G PV S+HGDR Q +RE
Sbjct: 451 TEEEKRSLFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRER 510
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
AL F++G+ IL+AT +A+RGLD+ V HV N++ P ++EEYVHR+GRTGR G +
Sbjct: 511 ALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKM 566
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 2 LAKEFLYRYIFLAIGRVGSTS-ENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA +L + + +G + + + + Q I E++KRS + L S S ++ +
Sbjct: 419 LAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQSLSPKDK-----VI 473
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
VFV K AD L L G PV S+HGDR Q +RE A
Sbjct: 474 VFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERA 511
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 261 (96.9 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 59/121 (48%), Positives = 77/121 (63%)
Query: 91 TQKEREEAQQYTL---ISCDE-ALTLVFVETKKGADQLEDFLHHHG--YPVTSIHGDRTQ 144
T ++ +A TL S DE A TL+F TKKGAD L+ ++ +G + ++HGD Q
Sbjct: 367 TDADKVDALMDTLGEIYSADEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQ 426
Query: 145 KEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
RE ++ F++ I+VAT VA+RGLDI + HVINF LPSD E YVHRIGRTGR G
Sbjct: 427 NRRERIVQDFKNKRLDIVVATDVASRGLDIKGISHVINFSLPSDCETYVHRIGRTGRAGA 486
Query: 205 L 205
L
Sbjct: 487 L 487
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 34/102 (33%), Positives = 54/102 (52%)
Query: 3 AKEFLYRYIFLAIGRVGSTS-ENITQRIAWVD-EQDKRSCLLDLLSSPSQEELGDEALTL 60
A++ + I L IG T+ +NI+Q+ V + DK L+D L + ++A TL
Sbjct: 335 AEKHIRTPIRLQIGSSQLTANKNISQKFKIVPTDADKVDALMDTLGEIYSAD--EKAQTL 392
Query: 61 VFVETKKGADQLEDFLHHHG--YPVTSIHGDRTQKEREEAQQ 100
+F TKKGAD L+ ++ +G + ++HGD Q RE Q
Sbjct: 393 IFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNRRERIVQ 434
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 262 (97.3 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 59/143 (41%), Positives = 85/143 (59%)
Query: 65 TKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCD-EALTLVFVETKKGADQ 123
T+ LE +H+ + + + ++K+ + Q I + E T++FVETK+ D
Sbjct: 296 TQINVGNLELSANHNILQIVDVCME-SEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDD 354
Query: 124 LEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGL--DIPHVKHVI 181
L + G+P IHGD++Q ER+ L FRSG+ PIL+AT VA+RGL D+ VK VI
Sbjct: 355 LTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLGFDVEDVKFVI 414
Query: 182 NFDLPSDVEEYVHRIGRTGRMGN 204
N+D P+ E+YVHRIGRT R N
Sbjct: 415 NYDYPNSSEDYVHRIGRTARSTN 437
Score = 132 (51.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA++FL Y + +G + S + NI Q + E +K L+ L+ E+ E T+
Sbjct: 287 LAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK---ENKTI 343
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 96
+FVETK+ D L + G+P IHGD++Q ER+
Sbjct: 344 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERD 379
>UNIPROTKB|E1BSE5 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
ArrayExpress:E1BSE5 Uniprot:E1BSE5
Length = 402
Score = 255 (94.8 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 52/114 (45%), Positives = 75/114 (65%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL + LT+ +F TK+ D L + + + V+S+HGD QKERE
Sbjct: 255 EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERES 314
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FRSG + +L++T V ARGLD+P V +IN+DLP++ E Y+HRIGR+GR G
Sbjct: 315 IMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYG 368
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 259 (96.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 52/92 (56%), Positives = 69/92 (75%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+F KK A ++E L ++GY V +IHGD +Q++R +AL F+SG++ +L+AT VAARG
Sbjct: 363 LIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARG 422
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP+VK VIN P VE+YVHRIGRTGR G
Sbjct: 423 LDIPNVKTVINLTFPLTVEDYVHRIGRTGRAG 454
Score = 123 (48.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSEN--ITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALT 59
LA F+ I ++IG + N ITQ + VD + K LL+LL +E +
Sbjct: 304 LASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKV- 362
Query: 60 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
L+F KK A ++E L ++GY V +IHGD +Q++R +A
Sbjct: 363 LIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQA 401
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 255 (94.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 52/114 (45%), Positives = 75/114 (65%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL + LT+ +F TK+ D L + + + V+S+HGD QKERE
Sbjct: 259 EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERES 318
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FRSG + +L++T V ARGLD+P V +IN+DLP++ E Y+HRIGR+GR G
Sbjct: 319 IMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYG 372
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 255 (94.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 52/114 (45%), Positives = 75/114 (65%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL + LT+ +F TK+ D L + + + V+S+HGD QKERE
Sbjct: 259 EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERES 318
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FRSG + +L++T V ARGLD+P V +IN+DLP++ E Y+HRIGR+GR G
Sbjct: 319 IMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYG 372
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 255 (94.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 52/114 (45%), Positives = 75/114 (65%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL + LT+ +F TK+ D L + + + V+S+HGD QKERE
Sbjct: 259 EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERES 318
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FRSG + +L++T V ARGLD+P V +IN+DLP++ E Y+HRIGR+GR G
Sbjct: 319 IMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYG 372
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 255 (94.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 52/114 (45%), Positives = 75/114 (65%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL + LT+ +F TK+ D L + + + V+S+HGD QKERE
Sbjct: 259 EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERES 318
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FRSG + +L++T V ARGLD+P V +IN+DLP++ E Y+HRIGR+GR G
Sbjct: 319 IMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYG 372
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 255 (94.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 52/114 (45%), Positives = 75/114 (65%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL + LT+ +F TK+ D L + + + V+S+HGD QKERE
Sbjct: 259 EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERES 318
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FRSG + +L++T V ARGLD+P V +IN+DLP++ E Y+HRIGR+GR G
Sbjct: 319 IMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYG 372
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 255 (94.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 52/114 (45%), Positives = 75/114 (65%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL + LT+ +F TK+ D L + + + V+S+HGD QKERE
Sbjct: 259 EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERES 318
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FRSG + +L++T V ARGLD+P V +IN+DLP++ E Y+HRIGR+GR G
Sbjct: 319 IMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYG 372
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 255 (94.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 52/114 (45%), Positives = 75/114 (65%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL + LT+ +F TK+ D L + + + V+S+HGD QKERE
Sbjct: 260 EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERES 319
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FRSG + +L++T V ARGLD+P V +IN+DLP++ E Y+HRIGR+GR G
Sbjct: 320 IMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYG 373
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 250 (93.1 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 53/113 (46%), Positives = 74/113 (65%)
Query: 92 QKEREEAQQYTLISCDE-ALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 150
Q E+E + L S + + ++F TK+ D L + H + IHGD+TQ ER+
Sbjct: 663 QMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRH-FGAVVIHGDKTQGERDWV 721
Query: 151 LRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
L +FRSG++ +L+AT VAARGLDI ++ VIN+D P+ VE+YVHRIGRTGR G
Sbjct: 722 LNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAG 774
Score = 42 (19.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 77 HHHGYPVTSIHGDRTQKEREEAQ 99
H HG+P + TQ++++ Q
Sbjct: 140 HPHGHPSVQTYQPTTQQQQQGMQ 162
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 255 (94.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 52/114 (45%), Positives = 75/114 (65%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL + LT+ +F TK+ D L + + + V+S+HGD QKERE
Sbjct: 262 EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERES 321
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FRSG + +L++T V ARGLD+P V +IN+DLP++ E Y+HRIGR+GR G
Sbjct: 322 IMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYG 375
>UNIPROTKB|Q9NZE6 [details] [associations]
symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
UCSC:uc003fqv.3 Uniprot:Q9NZE6
Length = 312
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 160 EREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDV 219
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 220 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 273
>UNIPROTKB|F1LP27 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
Uniprot:F1LP27
Length = 312
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 160 EREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDV 219
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 220 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 273
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 260 (96.6 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 48/112 (42%), Positives = 76/112 (67%)
Query: 95 REEAQQYTLISCDEALT---LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
++EA+ L+ C + + L+F E K D + ++L G +IHG + Q++RE A+
Sbjct: 381 KQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAI 440
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
F++G+ +LVAT VA++GLD P ++HVIN+D+P+++E YVHRIGRTGR G
Sbjct: 441 SSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCG 492
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 259 (96.2 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 48/112 (42%), Positives = 75/112 (66%)
Query: 95 REEAQQYTLISCDEALT---LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
++EA+ L+ C + T L+F E K D + ++L G +IHG + Q++R+ A+
Sbjct: 332 KQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAI 391
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
F++G+ +LVAT VA++GLD P ++HVIN+D+P ++E YVHRIGRTGR G
Sbjct: 392 SLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCG 443
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 253 (94.1 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 249 EREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDV 308
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 309 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 362
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 261 (96.9 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 52/127 (40%), Positives = 82/127 (64%)
Query: 77 HHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVT 136
+H+ + + D +KER + + + DE + +VF ET+KG D L+ L G+
Sbjct: 600 NHNVRQIVEVCQDFEKKERMLSFLGS-VGRDEKV-IVFAETRKGVDDLQRVLQFSGFKSI 657
Query: 137 SIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRI 196
IHG+++Q ER+ L +F++G PI++AT VA+RGLDI +K+V+N+D P+ +E Y+HRI
Sbjct: 658 GIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRI 717
Query: 197 GRTGRMG 203
GRT R G
Sbjct: 718 GRTARAG 724
Score = 122 (48.0 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSE-NITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA +FL +I + IG T+ N+ Q + + +K+ +L L S ++E +
Sbjct: 579 LAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSFLGSVGRDEK-----VI 633
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 96
VF ET+KG D L+ L G+ IHG+++Q ER+
Sbjct: 634 VFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERD 669
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 259 (96.2 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 49/92 (53%), Positives = 66/92 (71%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
++F TK+ DQL L + +IHGD++Q ER+ L +FRSG TP+LVAT VAARG
Sbjct: 407 IIFCSTKRMCDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARG 465
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LD+ ++ V+N+D P+ VE+YVHRIGRTGR G
Sbjct: 466 LDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAG 497
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 254 EREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDV 313
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 314 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 367
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 254 EREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDV 313
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 314 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 367
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 254 EREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDV 313
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 314 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 367
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 254 EREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDV 313
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 314 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 367
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 254 EREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDV 313
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 314 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 367
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 254 EREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDV 313
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 314 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 367
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 253 (94.1 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 254 EREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDV 313
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 314 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 367
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 253 (94.1 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 271 EREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDV 330
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 331 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 384
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 252 (93.8 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 255 EREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDV 314
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 315 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 368
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 252 (93.8 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 255 EREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDV 314
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 315 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 368
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 252 (93.8 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 255 EREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDV 314
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 315 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 368
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 252 (93.8 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 255 EREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDV 314
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 315 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 368
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 252 (93.8 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 255 EREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDV 314
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 315 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 368
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 252 (93.8 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 255 EREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDV 314
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 315 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 368
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 252 (93.8 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 255 EREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDV 314
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 315 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 368
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 254 (94.5 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 50/98 (51%), Positives = 67/98 (68%)
Query: 106 CDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVAT 165
C + + +VFV+ AD + L G PV S+HGDR Q +RE+AL F+ G+ ILVAT
Sbjct: 296 CTDVV-VVFVQLHVVADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVAT 354
Query: 166 AVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+A+RGLD+ + HV NFD P ++EEYVHR+GRTGR G
Sbjct: 355 DLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAG 392
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 242 (90.2 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 46/92 (50%), Positives = 63/92 (68%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
++FV K AD L L V S+HG+R Q +RE AL+ F++G+ IL+AT +A+RG
Sbjct: 490 IIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSFKTGKVRILIATDLASRG 549
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LD+ V HV N+D P ++EEYVHR+GRTGR G
Sbjct: 550 LDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAG 581
Score = 40 (19.1 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 35 QDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLED 74
Q K ++D L +E + L + V+ G D ++D
Sbjct: 123 QSKAKTVIDDLVKKQEEYKTESKLGVAAVQLSDGKDAMKD 162
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 252 (93.8 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 256 EREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDV 315
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 316 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 369
>UNIPROTKB|O05855 [details] [associations]
symbol:rhlE "PROBABLE ATP-DEPENDENT RNA HELICASE RHLE"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
EMBL:BX842582 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOGENOM:HOG000268807 EMBL:CP003248 PIR:D70595 RefSeq:NP_217727.1
RefSeq:NP_337835.1 RefSeq:YP_006516683.1 SMR:O05855
EnsemblBacteria:EBMYCT00000003215 EnsemblBacteria:EBMYCT00000071518
GeneID:13318029 GeneID:888840 GeneID:923099 KEGG:mtc:MT3307
KEGG:mtu:Rv3211 KEGG:mtv:RVBD_3211 PATRIC:18129030
TubercuList:Rv3211 OMA:RWQLIDK ProtClustDB:CLSK792349
Uniprot:O05855
Length = 527
Score = 256 (95.2 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 52/110 (47%), Positives = 70/110 (63%)
Query: 94 EREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRR 153
++ E L + D T++F TK+ A ++ D L G+ V ++HGD Q RE+AL+
Sbjct: 256 DKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKA 315
Query: 154 FRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
FR+G +LVAT VAARG+DI V HVIN+ P D + YVHRIGRTGR G
Sbjct: 316 FRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAG 365
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 253 (94.1 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 64/177 (36%), Positives = 93/177 (52%)
Query: 27 QRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFLHHHGYPVTSI 86
Q+I + +++ L S + ++L +E + V + + D + YPV
Sbjct: 170 QKILQAVNKKRQNLLFSATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVE-- 227
Query: 87 HGDRTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKE 146
Q+ + E + + LVF T+ AD L L+ G P +HG++ Q
Sbjct: 228 -----QRRKRELLSELIGKKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGS 282
Query: 147 REEALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
R ALR F SG+ +LVAT VAARGLDIP +++V+NFDLP E+YVHRIGRTGR G
Sbjct: 283 RRRALREFVSGKVRVLVATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAG 339
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 251 (93.4 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 50/92 (54%), Positives = 63/92 (68%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+F+ETK GA +L L G SIH R Q RE+ L F+SG+ LVATA+AARG
Sbjct: 252 LIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIKFLVATAIAARG 311
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDI + VIN+DLP+ V++Y+HRIGRTGR G
Sbjct: 312 LDIGELSRVINYDLPAQVDDYIHRIGRTGRAG 343
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 251 (93.4 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
E+EE + TL + LT+ +F TK+ D L + + H + V+S+HGD QKER+
Sbjct: 256 EKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDA 315
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+ FRSG++ +L+ T V ARG+D+ V VIN+DLP++ E Y+HRIGR+GR G
Sbjct: 316 IMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG 369
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 257 (95.5 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 49/92 (53%), Positives = 64/92 (69%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
++FV K AD + L G PV S+HGDR Q +RE+AL F+ G+ ILVAT +A+RG
Sbjct: 488 IIFVGKKSTADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVATDLASRG 547
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LD+ + HV NFD P ++EEYVHR+GRTGR G
Sbjct: 548 LDVHDITHVFNFDFPRNIEEYVHRVGRTGRAG 579
Score = 124 (48.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 52/204 (25%), Positives = 93/204 (45%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSEN-ITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LAK +L + + +G + + N + Q++ ++E++K++ + + + S + D+A+
Sbjct: 434 LAKSYLRNPMIVYVGTLDLAAVNTVEQKVIVINEEEKKAFMENFIDSMKPK---DKAI-- 488
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVET--- 117
+FV K AD + L G PV S+HGDR Q +RE+A L + + V T
Sbjct: 489 IFVGKKSTADDIASDLGVQGVPVQSLHGDREQCDREQA----LDDFKKGKVRILVATDLA 544
Query: 118 KKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA---VAARGLDI 174
+G D + D H + + + R R+G+ L+ A+ +DI
Sbjct: 545 SRGLD-VHDITHVFNFDFPRNIEEYVHRVGRTG-RAGRTGKAVTLITKKDWKAASELIDI 602
Query: 175 -PHVKHVINFDLPSDVEEYV-HRI 196
K V+ +L S E Y H+I
Sbjct: 603 LQRAKQVVPDELISMAERYKQHQI 626
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 257 (95.5 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 55/114 (48%), Positives = 72/114 (63%)
Query: 91 TQKEREEAQQYTLISCDEA-LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
T++E+ Q L S +VFV K AD L L V S+HGDR Q++RE+
Sbjct: 469 TEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREK 528
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
AL F++G+ IL+AT +A+RGLD+ V HV NFD P ++EEYVHRIGRTGR G
Sbjct: 529 ALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAG 582
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 251 (93.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 259 EREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDI 318
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 319 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 372
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 251 (93.4 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 66/179 (36%), Positives = 100/179 (55%)
Query: 27 QRIAWVDEQDKRSCLLDLLSSPSQEELGDEAL-TLVFVETKKGADQLEDFLHHHGYPVTS 85
+RI + + +++ L S +EL D+ L + +E + + + H +PV
Sbjct: 182 RRILKLLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVAR-RNTAAARITHVVHPV-- 238
Query: 86 IHGDRTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQK 145
DR Q++RE + + S + LVF TK GA++L L G +IHG+++Q
Sbjct: 239 ---DR-QRKRE-LLSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQA 293
Query: 146 EREEALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
R AL +F+ G+ +LVAT VAARGLDI + HVINF+LP ++YVHR+GRTGR N
Sbjct: 294 ARMRALTQFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASN 352
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 251 (93.4 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 66/179 (36%), Positives = 100/179 (55%)
Query: 27 QRIAWVDEQDKRSCLLDLLSSPSQEELGDEAL-TLVFVETKKGADQLEDFLHHHGYPVTS 85
+RI + + +++ L S +EL D+ L + +E + + + H +PV
Sbjct: 182 RRILKLLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVAR-RNTAAARITHVVHPV-- 238
Query: 86 IHGDRTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQK 145
DR Q++RE + + S + LVF TK GA++L L G +IHG+++Q
Sbjct: 239 ---DR-QRKRE-LLSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQA 293
Query: 146 EREEALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
R AL +F+ G+ +LVAT VAARGLDI + HVINF+LP ++YVHR+GRTGR N
Sbjct: 294 ARMRALTQFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASN 352
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 259 (96.2 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 49/94 (52%), Positives = 67/94 (71%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
+VFVETK + + + GY TSIHGD+TQ ER+ L+ FR+G++ IL+AT VA+RG
Sbjct: 495 IVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASRG 554
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNL 205
LD+ +++VIN+D P+ E YVHRIGRTGR L
Sbjct: 555 LDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQL 588
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/141 (32%), Positives = 71/141 (50%)
Query: 2 LAKEFLYRYIFLAIGRVG-STSENITQRIAWVDEQDKRSCLLDLLS--SPSQEELGDEAL 58
LA +FL YI + IG + S + NI Q + E +K L+ LL+ SP + +
Sbjct: 434 LAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNGNK 493
Query: 59 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETK 118
+VFVETK + + + GY TSIHGD+TQ ER+ + L V ++
Sbjct: 494 IIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASR 553
Query: 119 KGADQLED--FLHHHGYPVTS 137
G D +ED ++ ++ YP +S
Sbjct: 554 -GLD-VEDLQYVINYDYPNSS 572
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 255 (94.8 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 49/110 (44%), Positives = 73/110 (66%)
Query: 95 REEAQQYTLISCDEALT---LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
++EA+ L+ C + L+F E K+ D + ++L G +IHG + Q+ER A+
Sbjct: 412 KQEAKVVYLLDCLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAV 471
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
+R G+ +LVAT VA++GLD P+V+HVIN+D+P D+E YVHRIGRTGR
Sbjct: 472 DAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGR 521
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 3 AKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVF 62
A+ L + + + +GR G+ S N+TQ++ +V ++ K LLD L + L+F
Sbjct: 382 ARSALVKPVTINVGRAGAASMNVTQQVEYVKQEAKVVYLLDCLQKTAPP-------VLIF 434
Query: 63 VETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKGAD 122
E K+ D + ++L G +IHG + Q+ER A + + L V +K G D
Sbjct: 435 AEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASK-GLD 493
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 255 (94.8 bits), Expect = 6.7e-21, P = 6.7e-21
Identities = 49/110 (44%), Positives = 70/110 (63%)
Query: 94 EREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRR 153
E++EA L + + ++VFV T++ ++L D+L G+ ++HGD Q RE +
Sbjct: 251 EKDEAMARLLETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDH 310
Query: 154 FRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+ G ILVAT V ARGLD+P + HV N+D+P DVE Y+HRIGRTGR G
Sbjct: 311 IKQGVIDILVATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAG 360
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 255 (94.8 bits), Expect = 6.7e-21, P = 6.7e-21
Identities = 49/110 (44%), Positives = 70/110 (63%)
Query: 94 EREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRR 153
E++EA L + + ++VFV T++ ++L D+L G+ ++HGD Q RE +
Sbjct: 251 EKDEAMARLLETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDH 310
Query: 154 FRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+ G ILVAT V ARGLD+P + HV N+D+P DVE Y+HRIGRTGR G
Sbjct: 311 IKQGVIDILVATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAG 360
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 248 (92.4 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 50/114 (43%), Positives = 75/114 (65%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL + LT+ +F TK+ D L + + + V+S+HGD QKER+E
Sbjct: 247 EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDE 306
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FR+G++ +L+ T V ARG+D+ V VIN+DLP++ E Y+HRIGR+GR G
Sbjct: 307 IMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG 360
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 255 (94.8 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 55/114 (48%), Positives = 72/114 (63%)
Query: 92 QKEREEAQQYTLISCDEAL--TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
Q++ ++ + I E L L+FV K AD L L G V S+HGDR Q +REE
Sbjct: 505 QEDEKKDYVFDFIHRMEPLDKVLIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREE 564
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
AL+ F+ G ILVAT +A+RGLD+ + HV N+D P +VEEYVHR+GRTGR G
Sbjct: 565 ALQDFKDGRVRILVATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGRAG 618
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 49/164 (29%), Positives = 72/164 (43%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSEN-ITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTL 60
LAK +L + + +G + + N + Q + +V E +K+ + D + E L D+ L
Sbjct: 473 LAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYVFDFIHR--MEPL-DKVL-- 527
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVE-TKK 119
+FV K AD L L G V S+HGDR Q +REEA Q LV + +
Sbjct: 528 IFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREEALQD--FKDGRVRILVATDLASR 585
Query: 120 GADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILV 163
G D + D H Y + + R RSGE+ LV
Sbjct: 586 GLD-VHDITHVFNYDFPRNVEEYVHRVGRTG-RAGRSGESVTLV 627
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 250 (93.1 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 49/115 (42%), Positives = 69/115 (60%)
Query: 89 DRTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 148
+ T + + +A ++ + L ++F TK A +L D L GY +HGD Q +RE
Sbjct: 225 ETTDRAKPDALRFVMDRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRE 284
Query: 149 EALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FR + L+AT VAARGLD+ V HV N+D+P DVE Y+HRIGRTGR G
Sbjct: 285 RVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAG 339
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 250 (93.1 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 49/115 (42%), Positives = 69/115 (60%)
Query: 89 DRTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 148
+ T + + +A ++ + L ++F TK A +L D L GY +HGD Q +RE
Sbjct: 225 ETTDRAKPDALRFVMDRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRE 284
Query: 149 EALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FR + L+AT VAARGLD+ V HV N+D+P DVE Y+HRIGRTGR G
Sbjct: 285 RVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAG 339
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 248 (92.4 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 48/114 (42%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
E+EE + TL E LT+ +F+ T++ D L + +H + V+++HGD QKER+
Sbjct: 254 EKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMEQKERDV 313
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 314 IMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 367
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 252 (93.8 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 55/127 (43%), Positives = 73/127 (57%)
Query: 77 HHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVT 136
+H + + +R + +R A + LVF K A++LE FL G+
Sbjct: 335 NHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAV 394
Query: 137 SIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRI 196
SIHG++ Q ER +L F+ G P+LVAT VAARGLDIP V+ VIN+ P E+YVHRI
Sbjct: 395 SIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRI 454
Query: 197 GRTGRMG 203
GRTGR G
Sbjct: 455 GRTGRAG 461
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 248 (92.4 bits), Expect = 9.6e-21, P = 9.6e-21
Identities = 57/141 (40%), Positives = 80/141 (56%)
Query: 64 ETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKGADQ 123
E K AD +E ++ + DR + E + + S + LVF TK+ AD
Sbjct: 213 EKNKAADDVEQLVY-------GVDADR----KRELTSFLIGSRNWKQVLVFTRTKQCADD 261
Query: 124 LEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINF 183
L + G +IHGD++Q RE+AL F+ G+ L+AT VAARG+DI + HVIN+
Sbjct: 262 LAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVINY 321
Query: 184 DLPSDVEEYVHRIGRTGRMGN 204
+LP + E+YVHRIGRT R GN
Sbjct: 322 ELPYNAEDYVHRIGRTARAGN 342
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 248 (92.4 bits), Expect = 9.6e-21, P = 9.6e-21
Identities = 57/141 (40%), Positives = 80/141 (56%)
Query: 64 ETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKGADQ 123
E K AD +E ++ + DR + E + + S + LVF TK+ AD
Sbjct: 213 EKNKAADDVEQLVY-------GVDADR----KRELTSFLIGSRNWKQVLVFTRTKQCADD 261
Query: 124 LEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINF 183
L + G +IHGD++Q RE+AL F+ G+ L+AT VAARG+DI + HVIN+
Sbjct: 262 LAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVINY 321
Query: 184 DLPSDVEEYVHRIGRTGRMGN 204
+LP + E+YVHRIGRT R GN
Sbjct: 322 ELPYNAEDYVHRIGRTARAGN 342
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 248 (92.4 bits), Expect = 9.9e-21, P = 9.9e-21
Identities = 50/112 (44%), Positives = 74/112 (66%)
Query: 92 QKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+K + E Y + S + LVF +T++G+D L + L G SI+GD++Q R++AL
Sbjct: 235 KKRKRELLSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKAL 294
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
F++G+ L+AT VAARGLDI ++ V+N+D+P E+YVHRIGRTGR G
Sbjct: 295 DDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAG 346
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 248 (92.4 bits), Expect = 9.9e-21, P = 9.9e-21
Identities = 50/112 (44%), Positives = 74/112 (66%)
Query: 92 QKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+K + E Y + S + LVF +T++G+D L + L G SI+GD++Q R++AL
Sbjct: 235 KKRKRELLSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKAL 294
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
F++G+ L+AT VAARGLDI ++ V+N+D+P E+YVHRIGRTGR G
Sbjct: 295 DDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAG 346
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 247 (92.0 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 51/114 (44%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
EREE + TL + LT+ +F TK+ D L + + + V+S+HGD QKERE
Sbjct: 254 EREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERES 313
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FRSG + +L++T V ARGLD+ V +IN+DLP++ E Y+HRIGR+GR G
Sbjct: 314 IMKEFRSGASRVLISTDVWARGLDVSQVSLIINYDLPNNRELYIHRIGRSGRYG 367
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 257 (95.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 48/104 (46%), Positives = 72/104 (69%)
Query: 101 YTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETP 160
Y+ ++A +L+FV+ ++ AD L L GYP SIHG + Q +R+ + F++G P
Sbjct: 786 YSTDENEDARSLIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFP 845
Query: 161 ILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
+L+AT+VAARGLD+ +K V+N+D P+ +E+YVHR GRTGR GN
Sbjct: 846 VLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGN 889
Score = 124 (48.7 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLV 61
LA++ L + I + +G + ITQ + +E+ K LL+LL + + ++A +L+
Sbjct: 739 LARKTLTKPIEIVVGGRSVVAPEITQIVEVCNEEKKFVRLLELLGNLYSTDENEDARSLI 798
Query: 62 FVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 96
FV+ ++ AD L L GYP SIHG + Q +R+
Sbjct: 799 FVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRD 833
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 248 (92.4 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 48/93 (51%), Positives = 67/93 (72%)
Query: 111 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAAR 170
T++FV TK+ A+ L++ L+ + +P I GD Q++R + L F+SG+ PI++AT VA+R
Sbjct: 249 TMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPIMIATDVASR 308
Query: 171 GLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
GL I V HVIN+DLP D E+YVHRIGRT R G
Sbjct: 309 GLHIDGVSHVINYDLPQDAEDYVHRIGRTARAG 341
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 249 (92.7 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 52/92 (56%), Positives = 62/92 (67%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L F KK A ++E L G+ V IHGD +Q+ER +L F+SG +LVAT VAARG
Sbjct: 327 LAFCLYKKEAMRVERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVATDVAARG 386
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIPHVK V+N P VE+YVHRIGRTGR G
Sbjct: 387 LDIPHVKLVVNVTFPLTVEDYVHRIGRTGRAG 418
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 247 (92.0 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 48/114 (42%), Positives = 74/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
E+EE + TL E LT+ +F+ T++ D L + +H + V+++HGD QK+R+
Sbjct: 277 EKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKDRDL 336
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VIN+DLP++ E Y+HRIGR GR G
Sbjct: 337 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFG 390
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 231 (86.4 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 44/92 (47%), Positives = 62/92 (67%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+FV K A++L + L G+ + +HGD Q ER + + F+ + P+LVAT VAARG
Sbjct: 502 LLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARG 561
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP +K VIN+D+ D++ + HRIGRTGR G
Sbjct: 562 LDIPSIKTVINYDVARDIDTHTHRIGRTGRAG 593
Score = 49 (22.3 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 17 RVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFL 76
++GS N + A+ +++++ S +DL P++ + V++ D LE F+
Sbjct: 61 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM 120
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 231 (86.4 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 44/92 (47%), Positives = 62/92 (67%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+FV K A++L + L G+ + +HGD Q ER + + F+ + P+LVAT VAARG
Sbjct: 502 LLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARG 561
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP +K VIN+D+ D++ + HRIGRTGR G
Sbjct: 562 LDIPSIKTVINYDVARDIDTHTHRIGRTGRAG 593
Score = 49 (22.3 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 17 RVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFL 76
++GS N + A+ +++++ S +DL P++ + V++ D LE F+
Sbjct: 61 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM 120
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 231 (86.4 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 44/92 (47%), Positives = 62/92 (67%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+FV K A++L + L G+ + +HGD Q ER + + F+ + P+LVAT VAARG
Sbjct: 501 LLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARG 560
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP +K VIN+D+ D++ + HRIGRTGR G
Sbjct: 561 LDIPSIKTVINYDVARDIDTHTHRIGRTGRAG 592
Score = 49 (22.3 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 17 RVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFL 76
++GS N + A+ +++++ S +DL P++ + V++ D LE F+
Sbjct: 61 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM 120
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 247 (92.0 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 51/115 (44%), Positives = 71/115 (61%)
Query: 95 REEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRF 154
R+EA + L+ ++VF TK+ + D LH G+ V +HGD Q+ER++AL +F
Sbjct: 230 RDEALETLLLHHQPTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQF 289
Query: 155 RSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLDFPF 209
+ ILVAT VAARGLD+ ++ V N+DL D E +VHRIGRTGR G+ F
Sbjct: 290 ANKSISILVATDVAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAF 344
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 251 (93.4 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 46/92 (50%), Positives = 65/92 (70%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+F +TK+ D L L +H Y SIHGD+ Q+ER+ L +++ ILVAT VA+RG
Sbjct: 604 LIFCDTKRNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVATDVASRG 663
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDI ++ VIN+D+P+ +E+Y+HRIGRTGR G
Sbjct: 664 LDIKNISVVINYDIPNTIEDYIHRIGRTGRAG 695
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 231 (86.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 44/92 (47%), Positives = 62/92 (67%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+FV K A++L + L G+ + +HGD Q ER + + F+ + P+LVAT VAARG
Sbjct: 502 LLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARG 561
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP +K VIN+D+ D++ + HRIGRTGR G
Sbjct: 562 LDIPSIKTVINYDVARDIDTHTHRIGRTGRAG 593
Score = 48 (22.0 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 12/60 (20%), Positives = 29/60 (48%)
Query: 17 RVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFL 76
++GS N + A+ +++++ S +DL P++ + +++ D LE F+
Sbjct: 61 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPIDSDSDDDPLEAFM 120
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 247 (92.0 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 47/96 (48%), Positives = 64/96 (66%)
Query: 108 EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAV 167
EA+ +VFV TK+ +++ + L G+ +I GD Q +RE + R G+ ILVAT V
Sbjct: 251 EAM-IVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDV 309
Query: 168 AARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
AARGLD+ + HV+N+D+P D E YVHRIGRTGR G
Sbjct: 310 AARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAG 345
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 251 (93.4 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 46/93 (49%), Positives = 64/93 (68%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+FV TK +QL L G+ ++HGD+ Q ER + ++ F+ G+ IL+AT VAARG
Sbjct: 554 LIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARG 613
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
LDIP +K+V+N+D D+E + HRIGRTGR GN
Sbjct: 614 LDIPLIKNVVNYDTSRDIESHTHRIGRTGRAGN 646
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 251 (93.4 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 46/98 (46%), Positives = 69/98 (70%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
D+ +L+FVE ++ AD+L L GY S+HG + Q +R+ + F+SG P+++AT+
Sbjct: 627 DDVRSLIFVERQEKADELLRELLRKGYGCMSLHGGKDQVDRDSTISDFKSGVCPVMIATS 686
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
VAARGLD+ +K V+N+D P+ +E+YVHR GRTGR GN
Sbjct: 687 VAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGN 724
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 30/95 (31%), Positives = 52/95 (54%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLV 61
L K+ L + + +G + ITQ + DE+ K + LL+LL +++ D+ +L+
Sbjct: 576 LVKKVLKNPVEIEVGGKSVVASEITQIVEIRDEKSKFNRLLELLGELYKDD--DDVRSLI 633
Query: 62 FVETKKGADQLEDFLHHHGYPVTSIHGDRTQKERE 96
FVE ++ AD+L L GY S+HG + Q +R+
Sbjct: 634 FVERQEKADELLRELLRKGYGCMSLHGGKDQVDRD 668
>UNIPROTKB|Q9KKW0 [details] [associations]
symbol:VCA0990 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GenomeReviews:AE003853_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:IGAKENA ProtClustDB:CLSK869861
EMBL:AE004426 PIR:H82390 RefSeq:NP_233374.1
ProteinModelPortal:Q9KKW0 DNASU:2612329 GeneID:2612329
KEGG:vch:VCA0990 PATRIC:20086502 Uniprot:Q9KKW0
Length = 428
Score = 225 (84.3 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 45/92 (48%), Positives = 60/92 (65%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
LVF+ K+ AD L L+ G T +HGD++Q ERE AL F++G T +L+AT + ARG
Sbjct: 262 LVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATDLLARG 321
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+ I + VINF+LP E YVHR+GRT R G
Sbjct: 322 IHIELLPVVINFELPMHAETYVHRVGRTARAG 353
Score = 38 (18.4 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 56 EALTLVFVETKKGADQLEDFLHHHG 80
E LV V T++ A Q+ + L H G
Sbjct: 89 EQQALVLVPTRELAMQVSEVLTHVG 113
>TIGR_CMR|VC_A0990 [details] [associations]
symbol:VC_A0990 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GenomeReviews:AE003853_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:IGAKENA ProtClustDB:CLSK869861
EMBL:AE004426 PIR:H82390 RefSeq:NP_233374.1
ProteinModelPortal:Q9KKW0 DNASU:2612329 GeneID:2612329
KEGG:vch:VCA0990 PATRIC:20086502 Uniprot:Q9KKW0
Length = 428
Score = 225 (84.3 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 45/92 (48%), Positives = 60/92 (65%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
LVF+ K+ AD L L+ G T +HGD++Q ERE AL F++G T +L+AT + ARG
Sbjct: 262 LVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATDLLARG 321
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+ I + VINF+LP E YVHR+GRT R G
Sbjct: 322 IHIELLPVVINFELPMHAETYVHRVGRTARAG 353
Score = 38 (18.4 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 56 EALTLVFVETKKGADQLEDFLHHHG 80
E LV V T++ A Q+ + L H G
Sbjct: 89 EQQALVLVPTRELAMQVSEVLTHVG 113
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 247 (92.0 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 49/112 (43%), Positives = 68/112 (60%)
Query: 95 REEAQQYTLISCDEALT---LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
R E + ++ C + + L+F E K D + ++L G V SIHG + Q +R +
Sbjct: 425 RSENKLVRVLECLQKTSPKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKDQSDRHAGI 484
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
FR E +LVAT VA++GLD ++HVINFD+P D+E YVHRIGRTGR G
Sbjct: 485 EAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSG 536
Score = 112 (44.5 bits), Expect = 0.00093, P = 0.00093
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 3 AKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVF 62
AK L + I + +GR G+ S N+ Q + +V ++K +L+ L S + L+F
Sbjct: 395 AKSALVKPIVVNVGRAGAASLNVLQELEFVRSENKLVRVLECLQKTSPK-------VLIF 447
Query: 63 VETKKGADQLEDFLHHHGYPVTSIHGDRTQKER 95
E K D + ++L G V SIHG + Q +R
Sbjct: 448 AEKKVDVDNIYEYLLVKGVEVASIHGGKDQSDR 480
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 244 (91.0 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 50/113 (44%), Positives = 72/113 (63%)
Query: 93 KEREEAQQYTLISCDE-ALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
K+R+ A LI + A L+F++TK GA +L L G + H R+Q RE+ L
Sbjct: 227 KDRKSALLSHLIKENNWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLL 286
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
F++G+ P LVAT V +RG+DI ++ VIN+DLP + ++Y+HRIGRTGR GN
Sbjct: 287 IDFKAGKVPFLVATGVVSRGIDIDALERVINYDLPDEADDYIHRIGRTGRAGN 339
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 244 (91.0 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 50/113 (44%), Positives = 72/113 (63%)
Query: 93 KEREEAQQYTLISCDE-ALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
K+R+ A LI + A L+F++TK GA +L L G + H R+Q RE+ L
Sbjct: 227 KDRKSALLSHLIKENNWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLL 286
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
F++G+ P LVAT V +RG+DI ++ VIN+DLP + ++Y+HRIGRTGR GN
Sbjct: 287 IDFKAGKVPFLVATGVVSRGIDIDALERVINYDLPDEADDYIHRIGRTGRAGN 339
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 230 (86.0 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 44/92 (47%), Positives = 62/92 (67%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+FV K A++L + L G+ + +HGD Q ER + + F+ + P+LVAT VAARG
Sbjct: 502 LLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVILDFKKKDIPVLVATDVAARG 561
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP +K VIN+D+ D++ + HRIGRTGR G
Sbjct: 562 LDIPSIKTVINYDVARDIDTHTHRIGRTGRAG 593
Score = 46 (21.3 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 12/60 (20%), Positives = 28/60 (46%)
Query: 17 RVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFL 76
++GS N + A+ +++++ S +DL P++ + ++ D LE F+
Sbjct: 61 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFRSKPADSDSDDDPLEAFM 120
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 231 (86.4 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 44/92 (47%), Positives = 62/92 (67%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+FV K A++L + L G+ + +HGD Q ER + + F+ + P+LVAT VAARG
Sbjct: 502 LLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARG 561
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP +K VIN+D+ D++ + HRIGRTGR G
Sbjct: 562 LDIPSIKTVINYDVARDIDTHTHRIGRTGRAG 593
Score = 45 (20.9 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 12/60 (20%), Positives = 28/60 (46%)
Query: 17 RVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFL 76
++GS N + A+ +++++ S +DL P++ + ++ D LE F+
Sbjct: 61 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPADSDSDDDPLEAFM 120
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 241 (89.9 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 49/114 (42%), Positives = 72/114 (63%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
E+EE + TL E LT+ ++ T+K D L +H+ + V+ +HGD QK+R+
Sbjct: 244 EKEEWKLDTLCDLYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDL 303
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG T +LV T + ARG+D+ V VIN+DLP+ + Y+HRIGR+GR G
Sbjct: 304 IMREFRSGSTRVLVTTDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFG 357
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 241 (89.9 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 49/114 (42%), Positives = 72/114 (63%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
E+EE + TL E LT+ ++ T+K D L +H+ + V+ +HGD QK+R+
Sbjct: 244 EKEEWKLDTLCDLYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDL 303
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG T +LV T + ARG+D+ V VIN+DLP+ + Y+HRIGR+GR G
Sbjct: 304 IMREFRSGSTRVLVTTDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFG 357
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 241 (89.9 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 48/93 (51%), Positives = 64/93 (68%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+F TK+G D+L L+ G S HGD +Q RE+ L+ F+ G +LVAT VAARG
Sbjct: 249 LIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARG 308
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
LDI +++VINF+LP E+Y+HRIGRTGR G+
Sbjct: 309 LDIAELQYVINFELPFIAEDYIHRIGRTGRAGS 341
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 241 (89.9 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 48/93 (51%), Positives = 64/93 (68%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+F TK+G D+L L+ G S HGD +Q RE+ L+ F+ G +LVAT VAARG
Sbjct: 249 LIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARG 308
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
LDI +++VINF+LP E+Y+HRIGRTGR G+
Sbjct: 309 LDIAELQYVINFELPFIAEDYIHRIGRTGRAGS 341
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 246 (91.7 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 44/92 (47%), Positives = 63/92 (68%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
++FV T+ +L + L GY + +HGD Q+ RE A+ + ++G+ IL+AT VAARG
Sbjct: 248 IIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKNGKLDILIATDVAARG 307
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LD+ + HV+N+D+P D E YVHRIGRTGR G
Sbjct: 308 LDVERIGHVVNYDIPYDTEAYVHRIGRTGRAG 339
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 243 (90.6 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 55/126 (43%), Positives = 69/126 (54%)
Query: 83 VTSIHGDRTQKEREEAQQY--TLISCD-EALT--LVFVETKKGADQLEDFLHHHGYPVTS 137
V G R +E E + LI + E T ++F K D + L +GY
Sbjct: 222 VVLFKGSRRDREASEKRAVLRALIDAEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAP 281
Query: 138 IHGDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIG 197
IHGD Q +R L FR G+ +LVA+ VAARGLD+P V HV NFD+P E+YVHRIG
Sbjct: 282 IHGDLDQSQRTRTLDGFREGKLRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIG 341
Query: 198 RTGRMG 203
RTGR G
Sbjct: 342 RTGRAG 347
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 230 (86.0 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 44/92 (47%), Positives = 61/92 (66%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+FV K A++L L G+ + +HGD Q ER + + F+ + P+LVAT VAARG
Sbjct: 502 LLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARG 561
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP +K VIN+D+ D++ + HRIGRTGR G
Sbjct: 562 LDIPSIKTVINYDVARDIDTHTHRIGRTGRAG 593
Score = 45 (20.9 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 12/60 (20%), Positives = 28/60 (46%)
Query: 17 RVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFL 76
++GS N + A+ +++++ S +DL P++ + ++ D LE F+
Sbjct: 61 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPADSDSDDDPLEAFM 120
>UNIPROTKB|Q8EI96 [details] [associations]
symbol:srmB "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 239 (89.2 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 48/97 (49%), Positives = 61/97 (62%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
D +VFV+T+ LE L G P + GD QK+R +AL RF GE +L+AT
Sbjct: 244 DVKRAIVFVKTRDVVSSLEGQLLQAGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLLATD 303
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
VAARG+DI + HVINFD+P + Y+HRIGRTGR G
Sbjct: 304 VAARGIDIDDISHVINFDMPRSADTYIHRIGRTGRAG 340
>TIGR_CMR|SO_0947 [details] [associations]
symbol:SO_0947 "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 239 (89.2 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 48/97 (49%), Positives = 61/97 (62%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
D +VFV+T+ LE L G P + GD QK+R +AL RF GE +L+AT
Sbjct: 244 DVKRAIVFVKTRDVVSSLEGQLLQAGIPCAFMRGDMEQKKRFQALSRFTKGEVNVLLATD 303
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
VAARG+DI + HVINFD+P + Y+HRIGRTGR G
Sbjct: 304 VAARGIDIDDISHVINFDMPRSADTYIHRIGRTGRAG 340
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 223 (83.6 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 44/92 (47%), Positives = 60/92 (65%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+FV K A++L + L + + +HGD Q ER + + F+ PILVAT VAARG
Sbjct: 497 LLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARG 556
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP +K VIN+D+ D++ + HRIGRTGR G
Sbjct: 557 LDIPSIKTVINYDVARDIDTHTHRIGRTGRAG 588
Score = 46 (21.3 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 11/60 (18%), Positives = 28/60 (46%)
Query: 17 RVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFL 76
++GS N + A+ +++++ + +DL P++ + ++ D LE F+
Sbjct: 56 KIGSKRANFDEENAYFEDEEEDNSNVDLPYIPAENSPTRQQFNSKSADSDSDDDPLEAFM 115
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 240 (89.5 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 49/110 (44%), Positives = 71/110 (64%)
Query: 92 QKEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAL 151
+K + E + + + LVF TK GA+ L + L+ G +IHG+++Q R AL
Sbjct: 229 KKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRAL 288
Query: 152 RRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
F+SG+ +LVAT +AARGLDI + HV+N++LP+ E+YVHRIGRTGR
Sbjct: 289 ADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGR 338
Score = 124 (48.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 41/162 (25%), Positives = 77/162 (47%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLV 61
LA++ L+ + + + R + S+ +TQ + +VD++ KR L ++ + +++ LV
Sbjct: 197 LAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQV------LV 250
Query: 62 FVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQYTLISCDEALTLVFVETKKGA 121
F TK GA+ L + L+ G +IHG+++Q R A S D + + +G
Sbjct: 251 FTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALA-DFKSGDIRVLVATDIAARGL 309
Query: 122 DQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILV 163
D +E+ H Y + ++ D + R +GE LV
Sbjct: 310 D-IEELPHVVNYELPNVPEDYVHRIGRTG-RAAATGEALSLV 349
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 243 (90.6 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 46/92 (50%), Positives = 62/92 (67%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
++FV T+ + + L GYP +++GD Q +RE + + +SG++ ILVAT V ARG
Sbjct: 258 IIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSGKSSILVATDVVARG 317
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP + VIN+DLP D E YVHRIGRTGR G
Sbjct: 318 LDIPRISLVINYDLPGDNEAYVHRIGRTGRAG 349
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 48/93 (51%), Positives = 63/93 (67%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
LVF +TK GA++L L G +IHG+++Q R +AL F+ G ILVAT +AARG
Sbjct: 254 LVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGSVKILVATDIAARG 313
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
+DI + V+NFDLP+ E+YVHRIGRT R GN
Sbjct: 314 IDIDLLPQVVNFDLPNVPEDYVHRIGRTARAGN 346
Score = 113 (44.8 bits), Expect = 0.00046, P = 0.00046
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLV 61
LAK + + +++ ST+E +TQ + VD++ K + L L+ + +++ LV
Sbjct: 202 LAKGMVNNPLEISVDAENSTAEKVTQWLTAVDKKRKPAVLTHLIKENNWQQV------LV 255
Query: 62 FVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEA 98
F +TK GA++L L G +IHG+++Q R +A
Sbjct: 256 FTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKA 292
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 242 (90.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 48/111 (43%), Positives = 69/111 (62%)
Query: 93 KEREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALR 152
++R Q + + ++FV K AD L L V S+HG+R Q +RE AL+
Sbjct: 474 EKRSHIQTFIESMSPKDKVIIFVSRKAVADHLSSDLGIRHISVESLHGNREQGDRERALK 533
Query: 153 RFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
F++G+ IL+AT +A+RGLD+ V HV N+D P ++EEYVHR+GRTGR G
Sbjct: 534 NFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAG 584
>ASPGD|ASPL0000072637 [details] [associations]
symbol:AN4903 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BN001303 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACD01000084 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 RefSeq:XP_662507.1 ProteinModelPortal:Q5B3H7
EnsemblFungi:CADANIAT00005498 GeneID:2872706 KEGG:ani:AN4903.2
HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW Uniprot:Q5B3H7
Length = 525
Score = 240 (89.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 52/110 (47%), Positives = 69/110 (62%)
Query: 97 EAQQYTLISCDEALT---LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRR 153
EA + L+S + +T +VF T K AD LE L G+ VTS+H Q ER L R
Sbjct: 336 EAFLHVLLSTESNITKSAIVFTNTTKSADLLERLLRSLGHRVTSLHSLLPQSERNSNLAR 395
Query: 154 FRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
FR+ +LVAT VA+RGLDIP V V+NF++P + ++YVHR+GRT R G
Sbjct: 396 FRASAARVLVATDVASRGLDIPSVSLVVNFEVPRNPDDYVHRVGRTARAG 445
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 236 (88.1 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 48/114 (42%), Positives = 72/114 (63%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
++EE + TL ++LT+ +F TKK D L L + V S+HGD Q+ER++
Sbjct: 247 DKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDK 306
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+ FR+G + +L++T V ARG+D+ V VIN+DLP +E Y+HRIGR+GR G
Sbjct: 307 VMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFG 360
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 240 (89.5 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 45/90 (50%), Positives = 58/90 (64%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+F TK GA+ L D + G+ S+ G+ +Q R + FR G ILVAT +AARG
Sbjct: 243 LIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGNFKILVATDIAARG 302
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGR 201
LDI H+ HVIN+D+P E+Y HRIGRTGR
Sbjct: 303 LDIDHISHVINYDMPDTPEDYTHRIGRTGR 332
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 238 (88.8 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 50/111 (45%), Positives = 69/111 (62%)
Query: 94 EREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRR 153
+R +A + L+ T +F TKK Q+ D LH G+ V ++HGD Q++R++ L R
Sbjct: 235 DRLDALRLLLLGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLR 294
Query: 154 FRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
F + ILVAT VAARGLDI + VIN+ + D E +VHRIGRTGR G+
Sbjct: 295 FANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGS 345
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 238 (88.8 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 50/111 (45%), Positives = 69/111 (62%)
Query: 94 EREEAQQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRR 153
+R +A + L+ T +F TKK Q+ D LH G+ V ++HGD Q++R++ L R
Sbjct: 235 DRLDALRLLLLGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLR 294
Query: 154 FRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
F + ILVAT VAARGLDI + VIN+ + D E +VHRIGRTGR G+
Sbjct: 295 FANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGS 345
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 239 (89.2 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 56/116 (48%), Positives = 72/116 (62%)
Query: 89 DRTQKEREEAQQYTLISCDE-ALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKER 147
D+TQK A LI + LVF TK GA++L L +IHG+++Q R
Sbjct: 226 DKTQKS---ALLIQLIKQENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGAR 282
Query: 148 EEALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+AL F+SGE +LVAT +AARGLDI + V+NFDLP+ E+YVHRIGRTGR G
Sbjct: 283 TKALADFKSGEVRVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAG 338
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 235 (87.8 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 47/114 (41%), Positives = 73/114 (64%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
E+EE + TL + LT+ +F T++ D L D + + V+S+HG+ QKER+
Sbjct: 246 EKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDS 305
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
++ FR G + +L++T V ARG+D+ V VIN+DLP++ E Y+HRIGR+GR G
Sbjct: 306 IMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFG 359
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 235 (87.8 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 41/93 (44%), Positives = 65/93 (69%)
Query: 111 TLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAAR 170
+++F T++ DQL + H + V+++HGD Q++RE +++FRSG + +L+ T + AR
Sbjct: 272 SVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLAR 331
Query: 171 GLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
G+D+ V VIN+DLPS+ E Y+HRIGR GR G
Sbjct: 332 GIDVQQVSLVINYDLPSNRENYIHRIGRGGRFG 364
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 223 (83.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 44/92 (47%), Positives = 60/92 (65%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+FV K A++L + L + + +HGD Q ER + + F+ PILVAT VAARG
Sbjct: 502 LLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARG 561
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP +K VIN+D+ D++ + HRIGRTGR G
Sbjct: 562 LDIPSIKTVINYDVARDIDTHTHRIGRTGRAG 593
Score = 46 (21.3 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 11/60 (18%), Positives = 28/60 (46%)
Query: 17 RVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFL 76
++GS N + A+ +++++ + +DL P++ + ++ D LE F+
Sbjct: 61 KIGSKRANFDEENAYFEDEEEDNSNVDLPYIPAENSPTRQQFNSKSADSDSDDDPLEAFM 120
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 223 (83.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 44/92 (47%), Positives = 60/92 (65%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
L+FV K A++L + L + + +HGD Q ER + + F+ PILVAT VAARG
Sbjct: 504 LLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARG 563
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDIP +K VIN+D+ D++ + HRIGRTGR G
Sbjct: 564 LDIPSIKTVINYDVARDIDTHTHRIGRTGRAG 595
Score = 46 (21.3 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 11/60 (18%), Positives = 28/60 (46%)
Query: 17 RVGSTSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFL 76
++GS N + A+ +++++ + +DL P++ + ++ D LE F+
Sbjct: 61 KIGSKRANFDEENAYFEDEEEDNSNVDLPYIPAENSPTRQQFNSKSADSDSDDDPLEAFM 120
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 236 (88.1 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 46/93 (49%), Positives = 63/93 (67%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
+VF TK GAD + L +IHG+++Q +RE+AL F++G PILVAT +AARG
Sbjct: 254 IVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILVATDIAARG 313
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
+ + + HVIN+DLP E++VHRIGRT R GN
Sbjct: 314 IHVDALTHVINYDLPDVPEQFVHRIGRTARAGN 346
>TIGR_CMR|BA_4509 [details] [associations]
symbol:BA_4509 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268806 OMA:YAHVEPK HSSP:P10081
RefSeq:NP_846734.1 RefSeq:YP_021153.1 RefSeq:YP_030436.1
ProteinModelPortal:Q81LV0 SMR:Q81LV0
EnsemblBacteria:EBBACT00000013143 EnsemblBacteria:EBBACT00000016547
EnsemblBacteria:EBBACT00000022918 GeneID:1088235 GeneID:2818505
GeneID:2850064 KEGG:ban:BA_4509 KEGG:bar:GBAA_4509 KEGG:bat:BAS4187
ProtClustDB:CLSK887589 BioCyc:BANT260799:GJAJ-4244-MONOMER
BioCyc:BANT261594:GJ7F-4386-MONOMER Uniprot:Q81LV0
Length = 436
Score = 234 (87.4 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 45/95 (47%), Positives = 66/95 (69%)
Query: 110 LTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAA 169
L +VF TKK ADQ+ D L G V IHGD + ++R++ +++ R E +VAT +AA
Sbjct: 248 LAVVFTNTKKMADQVADGLMERGLKVGRIHGDLSPRDRKKMMKQIRDLEFQYIVATDLAA 307
Query: 170 RGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
RG+DI + HVIN++LPSD++ +VHR+GRT R G+
Sbjct: 308 RGIDIEGISHVINYELPSDLDFFVHRVGRTARAGH 342
>UNIPROTKB|Q9KV52 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006401 "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 234 (87.4 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 48/92 (52%), Positives = 59/92 (64%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
++F TK +Q+ L + V + GD QK+RE L +F G+ ILVAT VAARG
Sbjct: 260 IIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDILVATDVAARG 319
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
L IP V HV N+DLP D E+YVHRIGRTGR G
Sbjct: 320 LHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAG 351
>TIGR_CMR|VC_0305 [details] [associations]
symbol:VC_0305 "ATP-dependent RNA helicase RhlB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 234 (87.4 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 48/92 (52%), Positives = 59/92 (64%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
++F TK +Q+ L + V + GD QK+RE L +F G+ ILVAT VAARG
Sbjct: 260 IIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDILVATDVAARG 319
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
L IP V HV N+DLP D E+YVHRIGRTGR G
Sbjct: 320 LHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAG 351
>UNIPROTKB|Q8EJQ5 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 234 (87.4 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 53/104 (50%), Positives = 63/104 (60%)
Query: 102 TLISCD-EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETP 160
TLI D +VF TK + L +L G+ V + GD QK+R L +F G+
Sbjct: 249 TLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLD 308
Query: 161 ILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
ILVAT VAARGL I V HV N+DLP D E+YVHRIGRTGR GN
Sbjct: 309 ILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGN 352
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 44/167 (26%), Positives = 75/167 (44%)
Query: 21 TSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFLHHHG 80
TS+NI + I + ++DK LL L+ +E+ ++A+ VF TK + L +L G
Sbjct: 227 TSKNIKEEIFYPSQEDKMRLLLTLI----EEDWPEKAI--VFSNTKHSCENLWSWLEGDG 280
Query: 81 YPVTSIHGDRTQKEREEA-QQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIH 139
+ V + GD QK+R +Q+T D LV + + D H + Y +
Sbjct: 281 HRVGLLTGDVPQKKRIRILEQFTQGQLD---ILVATDVAARGLHISDVSHVYNYDLP--- 334
Query: 140 GDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLP 186
D + R R+G + V+ A L++P ++ IN +P
Sbjct: 335 -DDCEDYVHRIGRTGRAGNKGVSVSFACEEYALNLPAIETYINHSIP 380
>TIGR_CMR|SO_0407 [details] [associations]
symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 234 (87.4 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 53/104 (50%), Positives = 63/104 (60%)
Query: 102 TLISCD-EALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETP 160
TLI D +VF TK + L +L G+ V + GD QK+R L +F G+
Sbjct: 249 TLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLD 308
Query: 161 ILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
ILVAT VAARGL I V HV N+DLP D E+YVHRIGRTGR GN
Sbjct: 309 ILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGN 352
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 44/167 (26%), Positives = 75/167 (44%)
Query: 21 TSENITQRIAWVDEQDKRSCLLDLLSSPSQEELGDEALTLVFVETKKGADQLEDFLHHHG 80
TS+NI + I + ++DK LL L+ +E+ ++A+ VF TK + L +L G
Sbjct: 227 TSKNIKEEIFYPSQEDKMRLLLTLI----EEDWPEKAI--VFSNTKHSCENLWSWLEGDG 280
Query: 81 YPVTSIHGDRTQKEREEA-QQYTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIH 139
+ V + GD QK+R +Q+T D LV + + D H + Y +
Sbjct: 281 HRVGLLTGDVPQKKRIRILEQFTQGQLD---ILVATDVAARGLHISDVSHVYNYDLP--- 334
Query: 140 GDRTQKEREEALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLP 186
D + R R+G + V+ A L++P ++ IN +P
Sbjct: 335 -DDCEDYVHRIGRTGRAGNKGVSVSFACEEYALNLPAIETYINHSIP 380
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 233 (87.1 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 48/114 (42%), Positives = 69/114 (60%)
Query: 94 EREEAQQYTLISCDEALTL----VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREE 149
E+EE + TL E L + +FV T++ D L D + + V++ HGD Q R+
Sbjct: 260 EKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDI 319
Query: 150 ALRRFRSGETPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+R FRSG + +L+ T + ARG+D+ V VINFDLP+ E Y+HRIGR+GR G
Sbjct: 320 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG 373
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 239 (89.2 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 47/100 (47%), Positives = 67/100 (67%)
Query: 107 DEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATA 166
DE LVF K D++E L + + V ++HGD+ Q R E L++F+SG +L+AT
Sbjct: 472 DEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATD 531
Query: 167 VAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLD 206
VAARGLDI +K V+N+D+ D++ +VHRIGRTGR G+ D
Sbjct: 532 VAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRD 571
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 62/191 (32%), Positives = 92/191 (48%)
Query: 2 LAKEFLYRYIFLAIGRVGSTSENITQRIAWV-DEQDKRSCLLDLLSSPSQEELGDEALTL 60
LA+E L I + +G VG +E+ITQ + + + +K LL+ L P + GD L
Sbjct: 423 LAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKL--PGMIDEGD---VL 477
Query: 61 VFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEAQQ-------YTLISCDEA---L 110
VF K D++E L + + V ++HGD+ Q R E Q + LI+ D A L
Sbjct: 478 VFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGL 537
Query: 111 TLVFVETKKGADQLEDF-LHHHGYPVTSIHGDR-----TQKEREEALRRFRSGETPILVA 164
+ ++T D +D +H H T GDR T + EA RF +GE LV
Sbjct: 538 DIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREA--RF-AGE---LVN 591
Query: 165 TAVAARGLDIP 175
+ VAA G ++P
Sbjct: 592 SLVAA-GQNVP 601
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 232 (86.7 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 42/103 (40%), Positives = 68/103 (66%)
Query: 101 YTLISCDEALTLVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETP 160
Y +++ +A+ +F T++ D L + + + + V+ +HGD Q ER+ +R FRSG +
Sbjct: 263 YNVVNVTQAV--IFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSR 320
Query: 161 ILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
+L+ T + ARG+D+ V VIN+DLPS+ E Y+HRIGR+GR G
Sbjct: 321 VLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFG 363
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 206 (77.6 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 48/104 (46%), Positives = 62/104 (59%)
Query: 103 LISCDEALT-LVFVETKKGADQLEDFLHHHGYPVTSI--HGDRTQKEREEALRRFRSGET 159
+++ D T +VF K D + +L V SI H + Q+ RE L+ FR
Sbjct: 354 ILTADPTNTVIVFCNEKYKCDDFQHYLSTQKN-VKSIVLHSGKDQRMRESGLKLFRDHRI 412
Query: 160 PILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
IL+AT VAARGLDIP VK V N+ LP ++E+YVHRIGRTGR G
Sbjct: 413 RILIATDVAARGLDIPSVKAVFNYRLPGNIEDYVHRIGRTGRAG 456
Score = 54 (24.1 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 41 LLDLLSSPSQEELGDEALTLVFVETKKGADQLED 74
LL ++S P + G L LV T++ A Q+E+
Sbjct: 169 LLKIISLPKRPSYGATPLVLVMAPTRELAQQIEE 202
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 219 (82.2 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 41/93 (44%), Positives = 60/93 (64%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
++FV KK D + L T +H R+Q++RE AL F+ + +L+AT VA+RG
Sbjct: 685 IIFVNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAALEGFKKRKYEVLIATGVASRG 744
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGN 204
+ + V HVINFD+P ++E+Y HRIGRTGR G+
Sbjct: 745 IHVDGVTHVINFDIPKNIEDYTHRIGRTGRAGS 777
Score = 45 (20.9 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 55 DEALTLVFVETKKGADQLE----DFLHHHGYPVTSIHGDRTQKER 95
D LV T++ Q+E +F H G+ V S+ G ++ +++
Sbjct: 488 DGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQ 532
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 237 (88.5 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 47/92 (51%), Positives = 61/92 (66%)
Query: 112 LVFVETKKGADQLEDFLHHHGYPVTSIHGDRTQKEREEALRRFRSGETPILVATAVAARG 171
++F K AD L L G+ IHG+R Q +RE+A+ +SG ILVAT VA+RG
Sbjct: 533 IIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRG 592
Query: 172 LDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 203
LDI + HVIN+D P ++EEYVHR+GRTGR G
Sbjct: 593 LDIEDITHVINYDFPHNIEEYVHRVGRTGRAG 624
WARNING: HSPs involving 634 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 237 217 0.00090 112 3 11 22 0.38 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 884
No. of states in DFA: 605 (64 KB)
Total size of DFA: 175 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 20.96u 0.07s 21.03t Elapsed: 00:00:13
Total cpu time: 21.00u 0.07s 21.07t Elapsed: 00:00:15
Start: Thu Aug 15 11:43:45 2013 End: Thu Aug 15 11:44:00 2013
WARNINGS ISSUED: 2