Query psy15612
Match_columns 131
No_of_seqs 219 out of 1666
Neff 12.2
Searched_HMMs 46136
Date Fri Aug 16 17:08:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15612.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15612hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0272|consensus 100.0 5.6E-34 1.2E-38 172.0 9.2 130 1-130 243-375 (459)
2 KOG0272|consensus 100.0 1.4E-31 3.1E-36 161.7 12.8 127 2-128 328-458 (459)
3 KOG0279|consensus 100.0 3.1E-30 6.7E-35 149.2 15.0 130 1-130 87-222 (315)
4 KOG0263|consensus 100.0 4.4E-30 9.6E-35 164.4 12.8 129 2-130 518-649 (707)
5 KOG0263|consensus 100.0 1.6E-29 3.4E-34 161.9 14.1 131 1-131 475-608 (707)
6 KOG0271|consensus 100.0 2.4E-29 5.3E-34 151.1 13.3 129 1-130 139-276 (480)
7 KOG0271|consensus 100.0 4.8E-29 1E-33 149.9 12.3 115 16-130 113-235 (480)
8 KOG0266|consensus 100.0 1.9E-27 4E-32 151.7 16.4 130 1-130 183-318 (456)
9 KOG0266|consensus 100.0 5.5E-27 1.2E-31 149.5 18.0 130 1-130 227-364 (456)
10 KOG0286|consensus 100.0 5.2E-27 1.1E-31 136.8 15.1 128 2-129 169-302 (343)
11 KOG0279|consensus 100.0 7.1E-27 1.5E-31 135.4 14.4 129 2-130 41-180 (315)
12 KOG0285|consensus 100.0 3.5E-27 7.6E-32 141.0 13.4 131 1-131 175-308 (460)
13 KOG0315|consensus 100.0 1E-26 2.2E-31 133.2 13.9 129 1-130 22-154 (311)
14 PTZ00420 coronin; Provisional 99.9 1.5E-25 3.2E-30 144.6 18.9 130 1-130 56-197 (568)
15 KOG0286|consensus 99.9 4.3E-26 9.4E-31 133.0 14.5 127 2-128 212-343 (343)
16 KOG0291|consensus 99.9 7E-26 1.5E-30 145.6 15.3 128 2-129 333-507 (893)
17 KOG0645|consensus 99.9 2.1E-25 4.4E-30 129.0 15.6 129 1-129 39-179 (312)
18 KOG0315|consensus 99.9 1.1E-25 2.4E-30 129.0 14.4 130 1-130 107-288 (311)
19 KOG0295|consensus 99.9 1.2E-25 2.6E-30 134.3 14.5 130 1-130 217-364 (406)
20 PTZ00421 coronin; Provisional 99.9 5.1E-25 1.1E-29 140.9 17.7 115 16-130 73-198 (493)
21 KOG0284|consensus 99.9 8.2E-27 1.8E-31 141.0 8.9 130 1-130 162-294 (464)
22 KOG0292|consensus 99.9 6.2E-26 1.4E-30 148.3 11.6 129 1-129 33-164 (1202)
23 KOG0273|consensus 99.9 4.8E-25 1E-29 135.4 14.4 130 1-130 341-482 (524)
24 KOG0278|consensus 99.9 1.2E-24 2.7E-29 125.0 14.0 129 1-130 167-297 (334)
25 PTZ00421 coronin; Provisional 99.9 8.5E-24 1.8E-28 135.4 18.5 130 1-130 100-245 (493)
26 KOG0282|consensus 99.9 4.9E-25 1.1E-29 135.5 8.7 130 1-130 239-372 (503)
27 KOG0284|consensus 99.9 6.6E-25 1.4E-29 132.8 8.7 129 1-129 204-336 (464)
28 KOG0319|consensus 99.9 1E-23 2.2E-28 135.3 14.0 128 1-128 487-617 (775)
29 KOG0273|consensus 99.9 2.6E-23 5.6E-28 127.9 15.1 131 1-131 383-524 (524)
30 KOG0289|consensus 99.9 2.5E-23 5.5E-28 127.0 14.9 130 1-130 285-419 (506)
31 KOG0276|consensus 99.9 6.9E-24 1.5E-28 134.5 12.8 129 1-129 121-256 (794)
32 KOG0291|consensus 99.9 1.8E-23 3.9E-28 134.7 14.5 130 1-130 374-550 (893)
33 PTZ00420 coronin; Provisional 99.9 1.4E-22 3.1E-27 130.9 18.7 130 1-130 99-248 (568)
34 PLN00181 protein SPA1-RELATED; 99.9 1.2E-22 2.6E-27 137.2 18.5 129 1-130 557-690 (793)
35 KOG0295|consensus 99.9 4E-23 8.6E-28 123.6 13.9 129 1-129 259-405 (406)
36 KOG0319|consensus 99.9 2.4E-23 5.2E-28 133.6 13.2 130 1-130 436-577 (775)
37 KOG0269|consensus 99.9 1E-23 2.2E-28 135.9 10.8 130 1-130 112-250 (839)
38 KOG0265|consensus 99.9 6.7E-23 1.4E-27 120.1 13.0 115 16-130 45-163 (338)
39 KOG0277|consensus 99.9 7E-23 1.5E-27 117.9 12.9 130 1-130 85-221 (311)
40 KOG0282|consensus 99.9 4.5E-23 9.8E-28 127.0 11.9 130 1-130 282-462 (503)
41 KOG0277|consensus 99.9 6.6E-23 1.4E-27 118.0 11.3 130 1-130 129-265 (311)
42 KOG0296|consensus 99.9 6.7E-22 1.4E-26 118.5 15.8 129 2-130 89-220 (399)
43 KOG0318|consensus 99.9 6.9E-22 1.5E-26 123.2 15.6 123 8-130 136-265 (603)
44 cd00200 WD40 WD40 domain, foun 99.9 1E-21 2.2E-26 117.8 16.1 128 1-128 159-289 (289)
45 KOG0265|consensus 99.9 1.6E-22 3.4E-27 118.6 11.9 131 1-131 114-247 (338)
46 KOG0281|consensus 99.9 2.5E-23 5.4E-28 124.6 8.8 123 1-129 219-347 (499)
47 KOG0645|consensus 99.9 2.9E-21 6.4E-26 112.0 16.9 128 3-130 87-225 (312)
48 KOG0313|consensus 99.9 1.8E-22 3.9E-27 121.4 12.3 127 1-128 283-416 (423)
49 KOG0285|consensus 99.9 1.2E-22 2.5E-27 121.9 11.5 115 16-130 149-265 (460)
50 KOG0316|consensus 99.9 4.1E-22 8.9E-27 113.8 12.6 128 1-130 41-173 (307)
51 KOG0275|consensus 99.9 8.7E-24 1.9E-28 125.8 6.1 129 1-129 237-377 (508)
52 KOG0276|consensus 99.9 6.9E-22 1.5E-26 125.6 14.5 130 1-130 79-215 (794)
53 cd00200 WD40 WD40 domain, foun 99.9 4.8E-21 1E-25 114.8 17.6 130 1-130 117-249 (289)
54 KOG0264|consensus 99.9 5E-22 1.1E-26 121.3 13.2 130 1-130 202-347 (422)
55 KOG0302|consensus 99.9 7.9E-22 1.7E-26 118.8 13.6 130 1-130 236-378 (440)
56 KOG0264|consensus 99.9 1.4E-21 3E-26 119.4 14.2 130 1-130 252-404 (422)
57 KOG0281|consensus 99.9 1.3E-22 2.8E-27 121.6 9.2 123 1-129 259-387 (499)
58 KOG0647|consensus 99.9 2.1E-21 4.7E-26 114.0 13.9 128 1-130 52-184 (347)
59 KOG0643|consensus 99.9 4.2E-21 9.2E-26 111.3 14.7 130 1-130 76-220 (327)
60 KOG0316|consensus 99.9 1.5E-21 3.3E-26 111.6 12.7 119 12-130 10-131 (307)
61 KOG0269|consensus 99.9 2.8E-22 6.1E-27 129.4 10.4 130 1-130 158-296 (839)
62 KOG0647|consensus 99.9 9.7E-22 2.1E-26 115.5 11.6 115 16-130 25-145 (347)
63 KOG0267|consensus 99.9 5.7E-23 1.2E-27 131.9 6.6 130 1-130 94-226 (825)
64 PLN00181 protein SPA1-RELATED; 99.9 1.5E-20 3.3E-25 127.1 18.5 128 1-129 600-737 (793)
65 KOG0310|consensus 99.9 8E-21 1.7E-25 117.2 15.0 128 1-129 135-267 (487)
66 KOG0318|consensus 99.9 1.8E-20 3.9E-25 117.0 16.7 114 16-129 188-349 (603)
67 KOG0283|consensus 99.9 8.3E-22 1.8E-26 127.6 11.1 120 10-130 360-481 (712)
68 KOG0310|consensus 99.9 5.4E-22 1.2E-26 122.3 9.7 130 1-130 50-184 (487)
69 KOG1407|consensus 99.9 1.3E-20 2.7E-25 109.0 14.6 130 1-130 89-219 (313)
70 KOG0973|consensus 99.9 2.6E-21 5.6E-26 128.3 12.9 114 16-129 67-200 (942)
71 KOG0292|consensus 99.9 4E-21 8.6E-26 126.3 13.2 130 1-130 117-280 (1202)
72 KOG0283|consensus 99.9 1.1E-20 2.4E-25 122.5 14.9 130 1-130 392-532 (712)
73 KOG0308|consensus 99.9 4.7E-21 1E-25 122.0 12.1 130 1-130 97-243 (735)
74 KOG0293|consensus 99.9 4.5E-21 9.8E-26 116.9 11.3 114 16-129 222-341 (519)
75 KOG0639|consensus 99.9 3.9E-21 8.5E-26 119.9 11.1 131 1-131 533-705 (705)
76 KOG0274|consensus 99.9 2.9E-20 6.2E-25 120.0 15.1 125 1-130 273-400 (537)
77 KOG1446|consensus 99.9 1.3E-19 2.8E-24 106.9 16.4 130 1-130 82-262 (311)
78 KOG0305|consensus 99.9 4.8E-21 1E-25 120.7 11.1 128 1-130 241-376 (484)
79 KOG0313|consensus 99.9 1.1E-20 2.4E-25 113.9 12.1 119 11-130 252-376 (423)
80 KOG0288|consensus 99.9 3.7E-20 7.9E-25 112.7 14.2 128 1-128 324-459 (459)
81 KOG0306|consensus 99.9 1.1E-20 2.4E-25 122.1 12.4 127 2-128 533-662 (888)
82 KOG0640|consensus 99.9 9.7E-21 2.1E-25 112.2 10.8 118 12-129 165-290 (430)
83 KOG0268|consensus 99.9 1.9E-21 4.2E-26 116.7 7.6 129 1-129 212-344 (433)
84 KOG0305|consensus 99.9 2.2E-20 4.7E-25 117.8 12.5 127 1-129 199-330 (484)
85 KOG0303|consensus 99.9 9.9E-21 2.1E-25 114.8 10.3 115 16-130 79-203 (472)
86 KOG0639|consensus 99.9 7.6E-21 1.6E-25 118.6 9.8 130 1-130 442-581 (705)
87 KOG0274|consensus 99.9 2.2E-19 4.7E-24 115.9 16.7 126 1-130 230-359 (537)
88 KOG0302|consensus 99.9 1.9E-20 4E-25 113.0 10.8 120 11-130 203-332 (440)
89 KOG0646|consensus 99.9 9.8E-20 2.1E-24 112.1 14.1 130 1-130 105-307 (476)
90 KOG0278|consensus 99.8 2E-21 4.4E-26 111.9 5.7 128 2-130 84-213 (334)
91 KOG0772|consensus 99.8 8.9E-21 1.9E-25 118.3 8.5 115 16-130 266-394 (641)
92 KOG0306|consensus 99.8 3.3E-20 7.1E-25 120.0 11.1 130 1-130 45-179 (888)
93 KOG4283|consensus 99.8 6.3E-20 1.4E-24 108.1 11.1 129 1-129 126-275 (397)
94 KOG0640|consensus 99.8 5.4E-20 1.2E-24 109.0 10.9 129 1-129 196-334 (430)
95 KOG0300|consensus 99.8 1.7E-20 3.6E-25 111.7 8.7 129 2-130 173-344 (481)
96 KOG0267|consensus 99.8 5.6E-21 1.2E-25 122.9 6.7 128 3-130 54-184 (825)
97 KOG0294|consensus 99.8 3.3E-19 7.1E-24 105.5 13.4 128 1-129 65-196 (362)
98 KOG0289|consensus 99.8 4.4E-19 9.6E-24 108.8 14.2 125 3-127 329-459 (506)
99 PF08662 eIF2A: Eukaryotic tra 99.8 3.1E-18 6.6E-23 98.5 16.8 112 16-130 57-179 (194)
100 KOG1036|consensus 99.8 6.2E-19 1.3E-23 103.9 13.7 127 1-130 37-163 (323)
101 KOG2110|consensus 99.8 1.8E-18 4E-23 104.1 15.5 129 1-129 108-247 (391)
102 KOG1274|consensus 99.8 8.4E-19 1.8E-23 115.3 14.6 130 1-130 120-262 (933)
103 KOG0641|consensus 99.8 2.3E-18 4.9E-23 98.6 14.4 130 1-130 206-349 (350)
104 KOG0294|consensus 99.8 7.3E-19 1.6E-23 104.1 12.5 112 16-129 41-156 (362)
105 KOG1407|consensus 99.8 7.1E-19 1.5E-23 101.9 12.0 119 10-128 180-309 (313)
106 KOG0270|consensus 99.8 2.2E-18 4.9E-23 105.7 14.4 130 1-130 268-404 (463)
107 KOG0275|consensus 99.8 2E-19 4.3E-24 107.5 8.8 129 1-129 287-422 (508)
108 KOG1063|consensus 99.8 3.6E-19 7.9E-24 114.2 10.3 117 13-129 520-647 (764)
109 KOG1446|consensus 99.8 1.1E-17 2.4E-22 98.8 15.5 129 1-130 38-170 (311)
110 KOG0772|consensus 99.8 5E-19 1.1E-23 110.7 10.2 129 1-129 293-444 (641)
111 KOG0296|consensus 99.8 9.6E-18 2.1E-22 100.9 15.1 118 12-129 57-177 (399)
112 KOG1539|consensus 99.8 7.3E-19 1.6E-23 114.8 10.5 128 1-128 517-646 (910)
113 KOG0322|consensus 99.8 5.6E-19 1.2E-23 102.5 8.9 129 1-129 177-322 (323)
114 KOG0643|consensus 99.8 5E-17 1.1E-21 94.7 16.9 129 2-130 35-177 (327)
115 KOG0308|consensus 99.8 6E-18 1.3E-22 108.2 14.2 130 1-130 142-285 (735)
116 KOG0288|consensus 99.8 2.1E-18 4.6E-23 105.1 11.2 127 1-129 285-416 (459)
117 KOG2919|consensus 99.8 3.7E-18 8E-23 101.7 11.8 130 1-131 135-282 (406)
118 KOG1332|consensus 99.8 4.6E-18 9.9E-23 97.8 11.7 129 1-129 35-192 (299)
119 KOG0293|consensus 99.8 3.4E-18 7.3E-23 104.6 11.8 126 3-129 250-383 (519)
120 KOG1445|consensus 99.8 5.7E-19 1.2E-23 113.3 8.6 115 16-130 625-750 (1012)
121 KOG1273|consensus 99.8 6.9E-18 1.5E-22 100.3 11.9 98 14-112 20-118 (405)
122 KOG1036|consensus 99.8 1.5E-17 3.4E-22 98.1 13.1 114 16-130 11-124 (323)
123 KOG0300|consensus 99.8 3.7E-18 8E-23 101.8 10.2 114 16-130 270-386 (481)
124 KOG4283|consensus 99.8 1.3E-17 2.8E-22 98.5 12.0 115 16-130 99-219 (397)
125 KOG0268|consensus 99.8 2.2E-18 4.7E-23 103.8 8.9 130 1-130 169-302 (433)
126 KOG2394|consensus 99.8 2.7E-18 5.9E-23 107.8 9.5 92 18-109 290-383 (636)
127 KOG2096|consensus 99.8 1.7E-17 3.7E-22 98.9 11.8 125 1-127 211-399 (420)
128 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 2E-16 4.4E-21 96.3 17.0 128 1-129 13-144 (300)
129 KOG0646|consensus 99.8 2E-17 4.2E-22 102.1 11.6 129 2-130 64-206 (476)
130 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 5.3E-16 1.1E-20 94.5 17.4 130 1-130 55-187 (300)
131 KOG0299|consensus 99.8 1.7E-17 3.7E-22 102.3 10.7 129 1-130 226-356 (479)
132 KOG1063|consensus 99.8 3.1E-17 6.8E-22 105.5 12.2 129 1-129 554-698 (764)
133 KOG2111|consensus 99.8 2.7E-16 5.9E-21 93.4 15.2 95 36-130 155-256 (346)
134 KOG1034|consensus 99.8 2.5E-17 5.5E-22 98.2 10.9 115 16-130 87-211 (385)
135 KOG0299|consensus 99.8 3E-17 6.4E-22 101.2 11.4 115 16-130 140-274 (479)
136 KOG2106|consensus 99.8 2.8E-16 6.1E-21 98.4 15.2 125 1-128 392-519 (626)
137 KOG2096|consensus 99.7 1E-16 2.2E-21 95.6 12.1 114 17-130 186-308 (420)
138 KOG1188|consensus 99.7 8.1E-17 1.8E-21 96.3 11.6 130 1-130 52-196 (376)
139 KOG0641|consensus 99.7 6.1E-16 1.3E-20 88.7 14.4 128 2-130 166-303 (350)
140 KOG0973|consensus 99.7 1.7E-16 3.7E-21 105.9 14.0 80 10-89 120-201 (942)
141 KOG1009|consensus 99.7 3.1E-17 6.8E-22 99.9 9.1 114 16-129 63-194 (434)
142 KOG1007|consensus 99.7 1.7E-16 3.7E-21 93.5 11.8 128 1-128 195-359 (370)
143 KOG1332|consensus 99.7 2.7E-17 5.9E-22 94.7 8.2 129 1-129 82-240 (299)
144 KOG2055|consensus 99.7 2.8E-16 6E-21 97.3 13.1 131 1-131 327-513 (514)
145 KOG1272|consensus 99.7 1.3E-17 2.9E-22 103.2 7.4 129 1-130 193-323 (545)
146 PRK01742 tolB translocation pr 99.7 7.7E-16 1.7E-20 98.3 15.5 130 1-130 186-322 (429)
147 KOG1273|consensus 99.7 4.8E-16 1E-20 92.6 13.3 130 1-130 47-226 (405)
148 KOG0301|consensus 99.7 5.2E-16 1.1E-20 100.0 14.3 123 1-129 163-287 (745)
149 KOG0303|consensus 99.7 2.1E-16 4.5E-21 96.4 11.7 129 1-129 106-248 (472)
150 KOG2048|consensus 99.7 1.8E-15 4E-20 97.2 16.1 129 1-130 49-184 (691)
151 KOG0290|consensus 99.7 1.6E-16 3.5E-21 93.6 10.3 129 2-130 176-318 (364)
152 KOG0301|consensus 99.7 2.9E-16 6.2E-21 101.2 11.4 117 9-129 130-248 (745)
153 KOG1445|consensus 99.7 5E-17 1.1E-21 104.6 7.6 129 1-129 652-797 (1012)
154 KOG0771|consensus 99.7 4.6E-16 1E-20 95.0 11.1 128 1-129 168-353 (398)
155 KOG2055|consensus 99.7 1.1E-15 2.5E-20 94.6 12.8 129 1-129 282-416 (514)
156 KOG3881|consensus 99.7 2.2E-15 4.7E-20 91.6 13.1 130 1-130 175-320 (412)
157 KOG2048|consensus 99.7 6.4E-15 1.4E-19 94.8 15.6 128 2-130 93-233 (691)
158 KOG1009|consensus 99.7 3.1E-15 6.7E-20 91.4 12.5 115 16-130 11-153 (434)
159 KOG1310|consensus 99.7 5.5E-16 1.2E-20 98.3 9.5 115 16-130 48-178 (758)
160 KOG1034|consensus 99.7 2.3E-15 5E-20 90.0 11.6 89 1-89 117-211 (385)
161 KOG1539|consensus 99.7 9.5E-15 2.1E-19 96.1 15.1 128 1-128 184-316 (910)
162 KOG2919|consensus 99.7 2.8E-15 6.1E-20 89.6 11.5 130 1-130 181-327 (406)
163 KOG0270|consensus 99.7 1.2E-15 2.5E-20 94.0 10.1 115 16-130 241-360 (463)
164 KOG0321|consensus 99.7 1.2E-15 2.6E-20 97.7 10.4 115 16-130 98-248 (720)
165 KOG1007|consensus 99.7 2.7E-15 5.8E-20 88.6 10.9 128 1-129 146-288 (370)
166 PRK05137 tolB translocation pr 99.7 2.7E-14 5.8E-19 91.5 16.1 129 1-129 184-321 (435)
167 KOG4378|consensus 99.7 4.3E-15 9.3E-20 93.3 11.9 128 3-130 147-280 (673)
168 KOG1274|consensus 99.7 1.1E-14 2.4E-19 96.5 13.9 127 3-129 80-217 (933)
169 KOG4378|consensus 99.7 2.4E-15 5.3E-20 94.4 10.3 130 1-130 103-239 (673)
170 KOG1523|consensus 99.7 1E-14 2.2E-19 87.0 12.3 128 2-129 35-175 (361)
171 KOG2394|consensus 99.7 3.2E-15 6.9E-20 94.4 10.7 113 18-130 219-362 (636)
172 KOG1408|consensus 99.7 4.1E-15 8.8E-20 97.0 11.2 128 2-130 61-194 (1080)
173 KOG4328|consensus 99.7 1.7E-15 3.7E-20 93.7 8.9 130 1-130 212-353 (498)
174 COG2319 FOG: WD40 repeat [Gene 99.6 1.8E-13 4E-18 85.9 17.9 129 1-130 136-271 (466)
175 KOG0771|consensus 99.6 6.9E-15 1.5E-19 90.0 10.9 107 22-129 148-310 (398)
176 PRK03629 tolB translocation pr 99.6 9.8E-14 2.1E-18 88.8 16.7 129 1-129 181-316 (429)
177 PRK04922 tolB translocation pr 99.6 4.7E-14 1E-18 90.3 15.0 128 1-128 186-320 (433)
178 KOG1963|consensus 99.6 5.2E-14 1.1E-18 92.8 14.9 114 16-129 203-321 (792)
179 KOG1523|consensus 99.6 2.4E-14 5.2E-19 85.4 12.0 113 17-129 9-129 (361)
180 PRK03629 tolB translocation pr 99.6 1.2E-13 2.6E-18 88.3 15.9 129 1-129 225-362 (429)
181 KOG0307|consensus 99.6 2.3E-15 4.9E-20 101.3 8.1 116 16-131 114-241 (1049)
182 KOG2106|consensus 99.6 8.6E-14 1.9E-18 87.6 14.4 120 7-129 357-476 (626)
183 KOG1408|consensus 99.6 2.8E-14 6.1E-19 93.2 12.5 111 19-129 597-712 (1080)
184 PRK05137 tolB translocation pr 99.6 1.4E-13 3.1E-18 88.2 15.7 129 1-129 228-365 (435)
185 PRK02889 tolB translocation pr 99.6 2E-13 4.3E-18 87.4 16.0 128 2-129 179-313 (427)
186 KOG0650|consensus 99.6 3.9E-15 8.4E-20 95.1 8.0 127 1-127 589-732 (733)
187 KOG4227|consensus 99.6 1.1E-14 2.3E-19 89.5 9.6 115 16-130 54-179 (609)
188 PRK01742 tolB translocation pr 99.6 5.7E-14 1.2E-18 89.9 13.4 125 1-129 230-360 (429)
189 KOG2445|consensus 99.6 1.5E-13 3.4E-18 81.7 14.1 114 16-129 11-143 (361)
190 KOG0642|consensus 99.6 8.3E-15 1.8E-19 92.6 9.2 114 16-129 292-425 (577)
191 KOG0644|consensus 99.6 6.4E-16 1.4E-20 101.8 4.4 111 16-130 188-300 (1113)
192 PRK04922 tolB translocation pr 99.6 2.4E-13 5.1E-18 87.2 16.0 129 1-129 230-367 (433)
193 KOG2445|consensus 99.6 4.4E-13 9.6E-18 79.8 15.4 87 1-87 37-142 (361)
194 KOG0642|consensus 99.6 5.8E-14 1.3E-18 88.9 11.8 90 1-90 318-427 (577)
195 PRK02889 tolB translocation pr 99.6 5.1E-13 1.1E-17 85.5 15.9 129 1-129 222-359 (427)
196 TIGR02800 propeller_TolB tol-p 99.6 6.3E-13 1.4E-17 84.8 16.2 129 1-129 216-353 (417)
197 KOG1524|consensus 99.6 1.3E-14 2.8E-19 92.0 8.0 119 10-129 95-215 (737)
198 COG2319 FOG: WD40 repeat [Gene 99.6 2.3E-12 4.9E-17 81.0 17.9 129 1-130 180-314 (466)
199 KOG0307|consensus 99.6 3.3E-14 7.2E-19 95.9 9.7 129 2-130 187-327 (1049)
200 PRK00178 tolB translocation pr 99.6 1.6E-12 3.4E-17 83.4 16.5 127 2-128 182-317 (430)
201 KOG0974|consensus 99.6 1.5E-13 3.2E-18 92.2 11.9 127 1-129 157-287 (967)
202 KOG1188|consensus 99.6 2.3E-13 5E-18 81.9 11.5 130 1-130 96-242 (376)
203 KOG1272|consensus 99.6 1.9E-14 4E-19 89.6 6.8 125 2-128 234-360 (545)
204 KOG4497|consensus 99.5 6.6E-13 1.4E-17 80.0 12.6 128 1-128 73-238 (447)
205 PF08662 eIF2A: Eukaryotic tra 99.5 6.4E-13 1.4E-17 76.6 12.2 90 1-94 85-183 (194)
206 TIGR02800 propeller_TolB tol-p 99.5 2E-12 4.3E-17 82.5 15.6 128 2-129 173-309 (417)
207 KOG2110|consensus 99.5 3E-12 6.5E-17 77.8 15.2 125 2-129 71-203 (391)
208 KOG0321|consensus 99.5 9.2E-14 2E-18 89.4 9.1 109 22-130 53-175 (720)
209 KOG1538|consensus 99.5 3.8E-14 8.3E-19 92.1 7.1 125 1-128 35-160 (1081)
210 PRK11028 6-phosphogluconolacto 99.5 8E-12 1.7E-16 77.6 17.0 130 1-130 59-205 (330)
211 KOG0649|consensus 99.5 8.9E-13 1.9E-17 76.6 11.6 109 19-130 115-235 (325)
212 KOG4328|consensus 99.5 1.6E-13 3.6E-18 85.2 9.1 112 18-129 279-398 (498)
213 KOG2139|consensus 99.5 2.3E-12 4.9E-17 78.5 13.5 126 1-129 122-267 (445)
214 PRK04792 tolB translocation pr 99.5 4E-12 8.7E-17 81.8 15.5 125 3-127 202-333 (448)
215 PRK11028 6-phosphogluconolacto 99.5 1.1E-11 2.5E-16 76.9 17.0 130 1-130 14-156 (330)
216 KOG3914|consensus 99.5 8.8E-13 1.9E-17 80.7 11.5 110 20-130 109-223 (390)
217 KOG4227|consensus 99.5 1.4E-12 3E-17 80.4 12.3 130 1-130 80-225 (609)
218 KOG0974|consensus 99.5 1.7E-12 3.7E-17 87.2 13.3 126 2-129 112-245 (967)
219 KOG1517|consensus 99.5 2.5E-12 5.3E-17 87.3 13.8 129 1-130 1189-1333(1387)
220 KOG0649|consensus 99.5 4.6E-12 9.9E-17 73.7 13.0 124 1-129 138-273 (325)
221 PRK00178 tolB translocation pr 99.5 1.1E-11 2.3E-16 79.6 15.8 129 1-129 225-362 (430)
222 KOG0290|consensus 99.5 1.5E-12 3.3E-17 77.2 10.8 115 16-130 148-274 (364)
223 PRK04792 tolB translocation pr 99.5 2.1E-11 4.5E-16 78.6 16.1 127 1-127 244-377 (448)
224 KOG2139|consensus 99.5 8E-12 1.7E-16 76.2 12.9 110 19-129 196-308 (445)
225 KOG2315|consensus 99.5 1.4E-11 3E-16 78.5 14.5 125 2-129 254-389 (566)
226 KOG1524|consensus 99.5 1.7E-12 3.7E-17 82.6 10.2 122 1-125 128-281 (737)
227 KOG1538|consensus 99.4 7.7E-13 1.7E-17 86.3 7.9 99 20-120 14-113 (1081)
228 KOG1240|consensus 99.4 2E-11 4.4E-16 83.9 14.5 123 9-131 1038-1226(1431)
229 KOG2111|consensus 99.4 2.2E-10 4.7E-15 68.8 16.7 89 2-90 162-257 (346)
230 KOG2321|consensus 99.4 8.8E-12 1.9E-16 79.9 10.4 128 1-129 157-301 (703)
231 PF02239 Cytochrom_D1: Cytochr 99.4 6.7E-10 1.4E-14 70.0 17.8 128 1-128 18-156 (369)
232 KOG0650|consensus 99.4 4.6E-12 1E-16 81.4 8.0 125 3-128 550-678 (733)
233 COG4946 Uncharacterized protei 99.3 2.5E-10 5.3E-15 72.3 14.5 118 2-119 385-507 (668)
234 PRK01029 tolB translocation pr 99.3 4E-10 8.6E-15 72.4 15.2 111 19-129 281-402 (428)
235 PRK01029 tolB translocation pr 99.3 3.2E-10 7E-15 72.8 14.8 129 1-129 213-358 (428)
236 KOG1587|consensus 99.3 2.8E-10 6E-15 74.4 14.1 89 1-89 224-323 (555)
237 KOG4547|consensus 99.3 4.8E-10 1E-14 71.8 14.3 127 1-129 82-219 (541)
238 PRK04043 tolB translocation pr 99.3 1.4E-09 3.1E-14 69.6 16.5 118 1-120 215-338 (419)
239 KOG1310|consensus 99.3 2.2E-11 4.9E-16 77.9 7.6 78 53-130 44-125 (758)
240 PF02239 Cytochrom_D1: Cytochr 99.3 3.5E-10 7.5E-15 71.3 12.9 96 34-129 10-107 (369)
241 KOG1587|consensus 99.3 7.4E-11 1.6E-15 77.0 10.1 115 16-130 396-516 (555)
242 KOG3881|consensus 99.3 6.8E-11 1.5E-15 72.6 9.2 111 1-111 228-342 (412)
243 COG4946 Uncharacterized protei 99.3 1.9E-09 4.1E-14 68.4 15.4 115 15-129 356-476 (668)
244 KOG0280|consensus 99.3 4.7E-10 1E-14 66.9 11.7 110 21-130 124-241 (339)
245 KOG3914|consensus 99.2 5.1E-11 1.1E-15 73.2 7.3 91 3-94 136-228 (390)
246 KOG2321|consensus 99.2 2.4E-10 5.2E-15 73.6 10.3 126 1-127 199-340 (703)
247 KOG4547|consensus 99.2 2.2E-09 4.9E-14 68.9 14.4 128 1-130 17-172 (541)
248 KOG0322|consensus 99.2 6.2E-11 1.3E-15 69.7 6.3 70 19-88 252-322 (323)
249 KOG0644|consensus 99.2 1.4E-11 3.1E-16 82.0 3.4 124 1-128 214-344 (1113)
250 PF10282 Lactonase: Lactonase, 99.2 2.6E-08 5.6E-13 62.6 17.7 129 1-129 168-321 (345)
251 KOG4497|consensus 99.2 2.7E-10 5.8E-15 69.1 8.2 116 5-120 35-153 (447)
252 KOG1409|consensus 99.2 9.9E-10 2.1E-14 66.8 10.5 74 16-89 195-270 (404)
253 PF11768 DUF3312: Protein of u 99.2 1.4E-08 3.1E-13 65.6 16.2 114 16-130 203-329 (545)
254 PLN02919 haloacid dehalogenase 99.2 1.5E-08 3.3E-13 71.4 17.6 111 20-130 741-888 (1057)
255 PRK04043 tolB translocation pr 99.2 2.9E-08 6.4E-13 63.7 17.5 102 19-120 188-296 (419)
256 PF00400 WD40: WD domain, G-be 99.2 2.1E-10 4.6E-15 49.1 5.4 34 95-128 6-39 (39)
257 PF00400 WD40: WD domain, G-be 99.2 2.3E-10 5E-15 49.0 5.5 37 10-46 2-39 (39)
258 KOG1517|consensus 99.2 7.2E-10 1.6E-14 75.9 10.2 128 1-129 1233-1380(1387)
259 KOG1963|consensus 99.1 2.3E-09 4.9E-14 71.6 11.7 114 17-130 250-375 (792)
260 KOG1064|consensus 99.1 6.7E-10 1.4E-14 79.4 9.1 128 1-130 2232-2366(2439)
261 PF11768 DUF3312: Protein of u 99.1 1E-08 2.2E-13 66.3 12.9 73 16-89 257-329 (545)
262 KOG2041|consensus 99.1 4.2E-09 9.2E-14 70.0 10.6 111 16-126 12-141 (1189)
263 PF15492 Nbas_N: Neuroblastoma 99.0 1.4E-07 3.1E-12 56.3 14.9 113 17-129 42-258 (282)
264 TIGR02658 TTQ_MADH_Hv methylam 99.0 1.3E-07 2.9E-12 59.1 15.5 96 1-97 29-144 (352)
265 KOG4532|consensus 99.0 5E-08 1.1E-12 58.0 12.4 99 33-131 131-234 (344)
266 KOG0280|consensus 99.0 8.6E-09 1.9E-13 61.7 9.2 96 16-111 163-264 (339)
267 COG2706 3-carboxymuconate cycl 99.0 3.6E-07 7.8E-12 56.2 15.9 110 20-129 90-220 (346)
268 KOG2695|consensus 99.0 3.6E-09 7.8E-14 64.6 7.1 115 16-130 250-376 (425)
269 COG0823 TolB Periplasmic compo 99.0 2.7E-08 5.9E-13 63.8 11.2 120 1-120 220-345 (425)
270 KOG1334|consensus 99.0 4.7E-09 1E-13 66.5 7.3 115 16-130 140-263 (559)
271 KOG4532|consensus 98.9 4.9E-07 1.1E-11 53.9 14.8 111 20-130 160-282 (344)
272 PRK02888 nitrous-oxide reducta 98.9 2.6E-07 5.7E-12 61.2 14.8 127 3-129 219-403 (635)
273 PF10282 Lactonase: Lactonase, 98.9 2.1E-06 4.6E-11 54.1 19.2 114 17-130 85-222 (345)
274 PLN02919 haloacid dehalogenase 98.9 9.8E-07 2.1E-11 62.7 17.0 109 21-129 685-832 (1057)
275 COG5354 Uncharacterized protei 98.9 3.6E-07 7.7E-12 58.6 13.4 127 2-130 258-395 (561)
276 KOG1240|consensus 98.9 8.5E-08 1.8E-12 67.0 11.4 130 1-130 1175-1334(1431)
277 KOG4714|consensus 98.9 3.5E-08 7.6E-13 58.3 8.1 71 19-89 180-254 (319)
278 KOG1409|consensus 98.9 8.3E-08 1.8E-12 58.8 9.7 78 53-130 191-270 (404)
279 KOG2315|consensus 98.8 7.3E-08 1.6E-12 62.1 9.4 103 3-110 298-410 (566)
280 KOG0309|consensus 98.8 2E-08 4.4E-13 67.0 6.0 114 16-129 112-231 (1081)
281 KOG1275|consensus 98.8 1.2E-07 2.7E-12 64.5 9.4 125 2-128 200-340 (1118)
282 KOG3621|consensus 98.8 1.8E-07 4E-12 61.9 10.0 114 17-130 32-154 (726)
283 KOG2695|consensus 98.8 1.7E-08 3.8E-13 61.7 4.5 96 35-131 229-330 (425)
284 KOG2066|consensus 98.7 1.1E-06 2.3E-11 59.3 12.7 98 29-130 82-187 (846)
285 KOG1354|consensus 98.7 4.3E-08 9.3E-13 60.1 5.7 113 16-130 162-301 (433)
286 TIGR02658 TTQ_MADH_Hv methylam 98.7 2.2E-06 4.7E-11 53.9 13.2 89 40-130 27-136 (352)
287 COG2706 3-carboxymuconate cycl 98.7 4.9E-06 1.1E-10 51.4 14.1 130 1-130 18-175 (346)
288 KOG4640|consensus 98.7 2.7E-07 5.8E-12 60.5 9.2 94 17-110 19-115 (665)
289 KOG1354|consensus 98.7 3.1E-07 6.8E-12 56.4 7.8 128 1-129 187-358 (433)
290 PF08450 SGL: SMP-30/Gluconola 98.6 1.5E-05 3.2E-10 47.9 16.5 127 2-129 63-212 (246)
291 PF04762 IKI3: IKI3 family; I 98.6 6.3E-06 1.4E-10 58.0 14.1 128 1-130 239-379 (928)
292 KOG1334|consensus 98.6 3.1E-07 6.6E-12 58.6 6.8 111 19-129 337-465 (559)
293 KOG4190|consensus 98.6 9.2E-08 2E-12 62.3 4.6 77 16-94 733-817 (1034)
294 PF08553 VID27: VID27 cytoplas 98.6 1.3E-05 2.9E-10 55.1 14.6 126 1-129 506-646 (794)
295 COG0823 TolB Periplasmic compo 98.6 3.4E-06 7.3E-11 54.5 11.1 119 9-127 182-309 (425)
296 KOG1064|consensus 98.5 2.7E-07 5.8E-12 67.0 6.2 104 16-130 2290-2398(2439)
297 KOG1912|consensus 98.5 6.7E-06 1.5E-10 55.8 12.0 127 2-128 38-184 (1062)
298 KOG2314|consensus 98.5 3.5E-06 7.6E-11 55.0 10.3 105 21-128 213-332 (698)
299 KOG4714|consensus 98.5 2.8E-07 6.1E-12 54.7 4.6 68 62-129 182-253 (319)
300 KOG2314|consensus 98.5 2.8E-06 6E-11 55.4 9.1 102 15-118 247-364 (698)
301 KOG3617|consensus 98.5 1E-06 2.3E-11 60.2 7.5 112 17-129 14-130 (1416)
302 KOG2041|consensus 98.5 7.5E-07 1.6E-11 59.8 6.2 113 16-129 69-185 (1189)
303 PF00930 DPPIV_N: Dipeptidyl p 98.5 3.4E-06 7.5E-11 53.3 9.0 102 27-129 1-130 (353)
304 PF13360 PQQ_2: PQQ-like domai 98.4 7.8E-06 1.7E-10 48.7 9.9 128 1-129 5-139 (238)
305 KOG1645|consensus 98.4 2.5E-06 5.3E-11 53.6 7.7 91 3-94 177-271 (463)
306 PF08450 SGL: SMP-30/Gluconola 98.4 7.6E-05 1.6E-09 44.9 17.0 106 21-129 42-163 (246)
307 PF04762 IKI3: IKI3 family; I 98.4 3.6E-05 7.8E-10 54.4 13.4 68 19-86 76-147 (928)
308 PF07433 DUF1513: Protein of u 98.3 0.00014 3E-09 44.9 14.3 117 2-118 31-180 (305)
309 COG5354 Uncharacterized protei 98.3 9.1E-05 2E-09 48.1 12.6 126 2-129 205-347 (561)
310 COG5170 CDC55 Serine/threonine 98.3 1.7E-06 3.6E-11 52.9 4.7 114 16-131 170-310 (460)
311 TIGR03300 assembly_YfgL outer 98.3 4.5E-05 9.8E-10 48.7 11.3 119 2-127 254-376 (377)
312 PRK02888 nitrous-oxide reducta 98.3 9.3E-05 2E-09 49.7 12.7 89 2-90 299-405 (635)
313 KOG0309|consensus 98.3 6.8E-06 1.5E-10 55.5 7.5 90 42-131 93-189 (1081)
314 smart00320 WD40 WD40 repeats. 98.3 6.7E-06 1.4E-10 33.8 5.1 33 96-128 8-40 (40)
315 smart00320 WD40 WD40 repeats. 98.3 7.8E-06 1.7E-10 33.6 5.4 37 10-46 3-40 (40)
316 KOG1275|consensus 98.3 2.4E-05 5.3E-10 54.0 9.7 122 3-128 161-294 (1118)
317 KOG4640|consensus 98.2 1.3E-05 2.8E-10 53.0 8.1 70 59-129 20-91 (665)
318 KOG1645|consensus 98.2 1.7E-05 3.7E-10 50.0 7.4 77 55-131 189-267 (463)
319 PF00930 DPPIV_N: Dipeptidyl p 98.2 2.7E-05 5.7E-10 49.4 8.5 77 2-79 26-120 (353)
320 KOG2079|consensus 98.2 2.9E-05 6.2E-10 54.5 9.0 100 29-130 98-203 (1206)
321 PF04053 Coatomer_WDAD: Coatom 98.2 0.00031 6.7E-09 45.9 13.1 122 1-129 128-261 (443)
322 COG3391 Uncharacterized conser 98.2 0.00051 1.1E-08 44.2 15.9 128 2-129 99-238 (381)
323 KOG1920|consensus 98.1 0.00027 5.9E-09 50.4 13.0 67 19-85 69-135 (1265)
324 KOG1008|consensus 98.1 1.3E-06 2.7E-11 57.8 2.0 129 1-130 131-275 (783)
325 KOG2066|consensus 98.1 5.9E-05 1.3E-09 51.3 9.1 98 20-127 41-143 (846)
326 PF07433 DUF1513: Protein of u 98.1 0.00069 1.5E-08 41.9 15.1 130 1-130 79-247 (305)
327 KOG1920|consensus 98.1 0.00023 5E-09 50.7 11.4 129 1-131 224-366 (1265)
328 KOG2395|consensus 98.1 0.00077 1.7E-08 44.5 13.0 124 3-129 360-499 (644)
329 TIGR03300 assembly_YfgL outer 98.1 0.00091 2E-08 42.8 13.8 90 2-94 78-168 (377)
330 KOG1832|consensus 98.0 1.3E-05 2.8E-10 55.5 4.9 112 16-130 1099-1214(1516)
331 KOG0882|consensus 98.0 0.00043 9.3E-09 44.7 10.9 94 36-129 118-230 (558)
332 KOG2444|consensus 98.0 0.00011 2.3E-09 43.2 7.2 102 29-130 69-177 (238)
333 PRK13616 lipoprotein LpqB; Pro 97.9 0.0013 2.7E-08 44.8 12.7 106 20-129 398-524 (591)
334 PF02897 Peptidase_S9_N: Proly 97.9 0.00077 1.7E-08 43.7 11.0 95 22-118 127-244 (414)
335 KOG3617|consensus 97.9 1.9E-05 4.1E-10 54.4 3.7 71 19-89 60-131 (1416)
336 PRK13616 lipoprotein LpqB; Pro 97.9 0.0008 1.7E-08 45.7 11.1 103 19-126 350-472 (591)
337 KOG0882|consensus 97.9 0.0009 1.9E-08 43.3 10.5 79 16-94 142-236 (558)
338 COG5170 CDC55 Serine/threonine 97.9 0.00032 6.9E-09 43.3 8.3 113 17-130 25-201 (460)
339 KOG4190|consensus 97.8 2.9E-05 6.2E-10 51.2 3.8 94 1-94 806-911 (1034)
340 COG3391 Uncharacterized conser 97.8 0.0029 6.3E-08 40.8 13.4 109 21-129 76-189 (381)
341 PF03178 CPSF_A: CPSF A subuni 97.8 0.0026 5.6E-08 40.0 13.9 112 16-130 86-202 (321)
342 PF12894 Apc4_WD40: Anaphase-p 97.8 0.00022 4.7E-09 31.6 5.2 32 98-129 9-40 (47)
343 KOG4649|consensus 97.8 0.0024 5.1E-08 38.8 12.8 81 30-110 63-145 (354)
344 KOG1912|consensus 97.8 0.00016 3.4E-09 49.6 6.7 99 32-130 439-551 (1062)
345 PF12894 Apc4_WD40: Anaphase-p 97.8 0.00047 1E-08 30.5 6.2 34 16-49 9-42 (47)
346 KOG2114|consensus 97.8 0.0038 8.3E-08 43.5 12.9 110 18-128 125-241 (933)
347 COG3386 Gluconolactonase [Carb 97.6 0.0049 1.1E-07 38.6 13.3 109 9-118 152-273 (307)
348 KOG4649|consensus 97.6 0.0044 9.5E-08 37.7 12.2 100 30-130 23-123 (354)
349 PF05694 SBP56: 56kDa selenium 97.6 0.0067 1.4E-07 39.5 11.7 118 1-118 224-391 (461)
350 PF13360 PQQ_2: PQQ-like domai 97.6 0.0046 1E-07 36.8 14.4 126 1-130 88-230 (238)
351 PRK11138 outer membrane biogen 97.6 0.0078 1.7E-07 39.0 12.6 120 3-129 270-393 (394)
352 PF15492 Nbas_N: Neuroblastoma 97.5 0.0017 3.7E-08 39.5 7.9 65 65-130 3-73 (282)
353 KOG3621|consensus 97.5 0.0005 1.1E-08 46.5 6.2 89 2-90 58-155 (726)
354 PF15390 DUF4613: Domain of un 97.5 0.013 2.8E-07 39.6 12.0 113 16-128 54-184 (671)
355 PF03178 CPSF_A: CPSF A subuni 97.4 0.011 2.3E-07 37.2 12.5 124 1-129 4-156 (321)
356 PF04053 Coatomer_WDAD: Coatom 97.4 0.011 2.3E-07 39.0 10.7 55 71-128 117-171 (443)
357 PF06433 Me-amine-dh_H: Methyl 97.3 0.015 3.2E-07 36.8 14.4 125 1-128 19-163 (342)
358 PF14783 BBS2_Mid: Ciliary BBS 97.3 0.0064 1.4E-07 32.0 14.1 100 21-125 2-109 (111)
359 PF04841 Vps16_N: Vps16, N-ter 97.3 0.019 4.2E-07 37.5 15.1 46 1-49 63-110 (410)
360 PF06977 SdiA-regulated: SdiA- 97.3 0.013 2.9E-07 35.6 13.7 114 16-129 19-146 (248)
361 PF12234 Rav1p_C: RAVE protein 97.2 0.03 6.5E-07 38.5 12.5 105 22-128 33-154 (631)
362 KOG2114|consensus 97.2 0.011 2.4E-07 41.4 9.8 105 23-127 28-152 (933)
363 KOG1008|consensus 97.2 7E-05 1.5E-09 50.0 -0.2 112 19-130 57-184 (783)
364 PF08553 VID27: VID27 cytoplas 97.2 0.0074 1.6E-07 42.3 9.1 69 17-87 576-645 (794)
365 PF10313 DUF2415: Uncharacteri 97.2 0.0028 6E-08 27.3 4.6 30 101-130 1-33 (43)
366 PF14583 Pectate_lyase22: Olig 97.1 0.036 7.8E-07 35.8 12.8 127 2-129 217-380 (386)
367 COG3386 Gluconolactonase [Carb 97.0 0.033 7.2E-07 35.0 13.8 110 19-128 111-241 (307)
368 KOG1832|consensus 97.0 0.0017 3.6E-08 45.8 4.3 75 55-129 1097-1174(1516)
369 PF08596 Lgl_C: Lethal giant l 97.0 0.048 1E-06 35.6 12.2 72 58-130 85-173 (395)
370 PF07569 Hira: TUP1-like enhan 97.0 0.028 6.1E-07 33.5 9.0 62 67-129 18-94 (219)
371 PF12234 Rav1p_C: RAVE protein 96.9 0.032 7E-07 38.4 10.1 86 1-88 53-155 (631)
372 PRK11138 outer membrane biogen 96.8 0.062 1.3E-06 34.9 11.9 95 30-129 256-352 (394)
373 PF10647 Gmad1: Lipoprotein Lp 96.8 0.052 1.1E-06 33.2 12.7 105 20-126 25-140 (253)
374 COG3490 Uncharacterized protei 96.7 0.06 1.3E-06 33.5 12.1 112 8-119 57-180 (366)
375 KOG2079|consensus 96.7 0.02 4.2E-07 41.3 8.0 67 16-82 128-198 (1206)
376 COG3490 Uncharacterized protei 96.6 0.073 1.6E-06 33.1 11.7 116 2-117 94-242 (366)
377 PF00780 CNH: CNH domain; Int 96.6 0.069 1.5E-06 32.8 11.5 62 28-92 5-67 (275)
378 PF10168 Nup88: Nuclear pore c 96.6 0.12 2.7E-06 36.4 11.1 73 20-93 86-183 (717)
379 PF10168 Nup88: Nuclear pore c 96.6 0.14 3.1E-06 36.1 12.7 72 59-130 84-179 (717)
380 PF14870 PSII_BNR: Photosynthe 96.6 0.086 1.9E-06 33.1 12.7 70 56-126 141-211 (302)
381 PF10313 DUF2415: Uncharacteri 96.6 0.017 3.7E-07 24.9 5.5 31 19-49 1-34 (43)
382 COG3204 Uncharacterized protei 96.5 0.09 1.9E-06 32.8 12.6 114 16-129 83-209 (316)
383 PF14583 Pectate_lyase22: Olig 96.4 0.13 2.8E-06 33.4 12.2 112 5-116 16-140 (386)
384 PF02897 Peptidase_S9_N: Proly 96.4 0.14 3E-06 33.5 14.6 90 1-91 152-262 (414)
385 KOG2377|consensus 96.3 0.16 3.5E-06 33.8 9.7 98 17-116 65-169 (657)
386 PRK10115 protease 2; Provision 96.3 0.24 5.2E-06 34.9 13.1 105 21-128 129-253 (686)
387 PF14783 BBS2_Mid: Ciliary BBS 96.2 0.072 1.6E-06 28.2 9.6 64 62-128 2-69 (111)
388 PF07569 Hira: TUP1-like enhan 96.1 0.14 3.1E-06 30.6 8.9 75 17-94 11-100 (219)
389 KOG4499|consensus 96.0 0.17 3.7E-06 30.7 12.0 91 20-110 159-263 (310)
390 PF14870 PSII_BNR: Photosynthe 95.9 0.21 4.7E-06 31.4 15.5 104 16-120 142-252 (302)
391 PF08728 CRT10: CRT10; InterP 95.9 0.37 8E-06 34.0 11.3 109 21-129 103-245 (717)
392 KOG3630|consensus 95.9 0.058 1.3E-06 39.4 6.6 109 20-128 102-226 (1405)
393 KOG4441|consensus 95.8 0.36 7.7E-06 33.3 10.2 120 2-122 304-438 (571)
394 KOG1897|consensus 95.8 0.47 1E-05 34.6 13.2 125 1-128 752-896 (1096)
395 COG5167 VID27 Protein involved 95.8 0.34 7.4E-06 32.9 11.7 122 5-129 496-631 (776)
396 PF03088 Str_synth: Strictosid 95.7 0.12 2.5E-06 26.3 7.8 40 38-77 35-74 (89)
397 TIGR02276 beta_rpt_yvtn 40-res 95.6 0.058 1.2E-06 22.7 5.5 40 69-108 1-41 (42)
398 PF14655 RAB3GAP2_N: Rab3 GTPa 95.6 0.38 8.3E-06 31.8 11.5 79 16-94 305-403 (415)
399 KOG2247|consensus 95.6 0.0013 2.8E-08 43.2 -1.9 102 16-117 72-176 (615)
400 PHA02713 hypothetical protein; 95.4 0.47 1E-05 32.6 9.4 85 41-129 433-532 (557)
401 PF00780 CNH: CNH domain; Int 95.3 0.37 8E-06 29.6 13.0 124 2-129 19-164 (275)
402 KOG1916|consensus 95.2 0.016 3.5E-07 41.2 2.2 66 24-89 189-265 (1283)
403 COG5276 Uncharacterized conser 95.2 0.43 9.3E-06 30.1 13.8 108 16-129 84-198 (370)
404 PHA02713 hypothetical protein; 95.1 0.68 1.5E-05 31.9 10.7 64 29-94 351-445 (557)
405 KOG2280|consensus 95.1 0.78 1.7E-05 32.5 12.2 48 1-51 66-115 (829)
406 PF07676 PD40: WD40-like Beta 95.1 0.092 2E-06 21.8 4.6 31 56-86 5-38 (39)
407 PF11715 Nup160: Nucleoporin N 95.1 0.29 6.4E-06 33.4 7.9 67 28-94 156-253 (547)
408 PF07995 GSDH: Glucose / Sorbo 95.0 0.55 1.2E-05 30.0 11.5 100 20-120 3-133 (331)
409 KOG1916|consensus 94.9 0.034 7.3E-07 39.7 3.0 113 16-130 130-265 (1283)
410 KOG3630|consensus 94.9 0.16 3.5E-06 37.4 6.2 101 18-118 155-261 (1405)
411 COG5276 Uncharacterized conser 94.9 0.56 1.2E-05 29.6 13.6 114 1-118 108-231 (370)
412 cd00216 PQQ_DH Dehydrogenases 94.8 0.77 1.7E-05 31.1 11.1 25 70-94 405-429 (488)
413 PF05096 Glu_cyclase_2: Glutam 94.8 0.53 1.2E-05 29.1 14.9 115 2-119 113-249 (264)
414 PF04841 Vps16_N: Vps16, N-ter 94.5 0.84 1.8E-05 30.2 13.1 54 60-113 217-272 (410)
415 TIGR02171 Fb_sc_TIGR02171 Fibr 94.5 0.49 1.1E-05 34.2 7.8 72 4-75 334-414 (912)
416 PF06977 SdiA-regulated: SdiA- 94.5 0.63 1.4E-05 28.6 10.7 74 55-129 17-93 (248)
417 TIGR02171 Fb_sc_TIGR02171 Fibr 94.4 0.97 2.1E-05 32.9 9.0 75 40-114 329-412 (912)
418 COG4590 ABC-type uncharacteriz 94.4 0.98 2.1E-05 30.4 9.3 100 29-129 279-385 (733)
419 PF12657 TFIIIC_delta: Transcr 94.3 0.53 1.1E-05 27.0 8.7 30 100-129 85-120 (173)
420 PF06433 Me-amine-dh_H: Methyl 94.3 0.84 1.8E-05 29.3 14.2 126 1-129 69-212 (342)
421 KOG2444|consensus 94.2 0.17 3.6E-06 30.4 4.5 61 29-89 113-177 (238)
422 KOG2377|consensus 94.2 1.1 2.4E-05 30.2 10.6 94 22-117 26-128 (657)
423 PHA03098 kelch-like protein; P 94.1 1.2 2.6E-05 30.4 10.9 65 29-94 342-419 (534)
424 TIGR02604 Piru_Ver_Nterm putat 94.1 1 2.2E-05 29.3 12.1 99 19-119 14-142 (367)
425 PF08596 Lgl_C: Lethal giant l 94.1 1.1 2.3E-05 29.6 9.6 72 17-89 85-173 (395)
426 PF10647 Gmad1: Lipoprotein Lp 94.0 0.81 1.8E-05 28.1 13.6 103 19-121 66-186 (253)
427 KOG2395|consensus 94.0 0.4 8.7E-06 32.5 6.3 65 21-87 433-498 (644)
428 PHA03098 kelch-like protein; P 94.0 1.3 2.8E-05 30.2 10.4 98 29-129 389-510 (534)
429 PF15390 DUF4613: Domain of un 93.9 1.4 3.1E-05 30.5 10.5 69 22-90 116-187 (671)
430 TIGR03032 conserved hypothetic 93.9 1 2.2E-05 28.7 11.7 84 29-114 212-318 (335)
431 cd00216 PQQ_DH Dehydrogenases 93.9 1.3 2.9E-05 30.0 12.0 93 32-129 303-423 (488)
432 TIGR02276 beta_rpt_yvtn 40-res 93.4 0.28 6E-06 20.5 5.7 25 28-52 1-26 (42)
433 PF14761 HPS3_N: Hermansky-Pud 93.2 1.1 2.4E-05 26.8 14.7 99 31-131 29-164 (215)
434 PF14761 HPS3_N: Hermansky-Pud 93.1 1.1 2.4E-05 26.8 7.7 48 73-120 30-79 (215)
435 PF14269 Arylsulfotran_2: Aryl 93.0 1.5 3.2E-05 27.8 7.8 68 61-128 145-218 (299)
436 TIGR03075 PQQ_enz_alc_DH PQQ-d 93.0 1.3 2.8E-05 30.4 7.6 51 2-52 444-494 (527)
437 TIGR02604 Piru_Ver_Nterm putat 92.6 1.9 4.1E-05 28.1 13.5 98 19-119 72-202 (367)
438 KOG1900|consensus 92.6 3.7 8E-05 31.3 12.2 129 1-130 101-272 (1311)
439 KOG4441|consensus 92.5 2.5 5.5E-05 29.4 10.3 92 29-122 380-486 (571)
440 PF03088 Str_synth: Strictosid 92.4 0.81 1.8E-05 23.3 7.1 40 79-118 35-74 (89)
441 PF05096 Glu_cyclase_2: Glutam 92.4 1.7 3.7E-05 27.0 14.3 115 12-129 36-156 (264)
442 PF12768 Rax2: Cortical protei 92.3 1.8 3.9E-05 27.2 11.5 87 1-87 18-121 (281)
443 KOG4460|consensus 92.3 2.6 5.7E-05 29.0 8.5 74 20-94 105-203 (741)
444 KOG4499|consensus 92.1 1.8 3.9E-05 26.6 7.2 46 23-68 216-262 (310)
445 KOG4460|consensus 91.9 3 6.4E-05 28.8 10.6 70 60-129 104-197 (741)
446 TIGR03075 PQQ_enz_alc_DH PQQ-d 91.8 3.1 6.6E-05 28.7 10.6 25 70-94 471-495 (527)
447 KOG3616|consensus 91.7 0.96 2.1E-05 32.5 5.9 36 16-51 12-47 (1636)
448 PF01436 NHL: NHL repeat; Int 91.4 0.44 9.5E-06 18.3 4.1 26 102-127 3-28 (28)
449 KOG1900|consensus 91.4 4.5 9.8E-05 30.9 8.9 92 37-131 96-206 (1311)
450 TIGR03606 non_repeat_PQQ dehyd 91.4 3.2 6.9E-05 28.1 15.4 105 16-120 27-165 (454)
451 PF10214 Rrn6: RNA polymerase 91.2 4.4 9.5E-05 29.4 13.3 92 19-111 146-257 (765)
452 KOG0918|consensus 91.2 3.1 6.8E-05 27.6 10.2 93 1-93 231-346 (476)
453 TIGR03074 PQQ_membr_DH membran 91.1 4.5 9.9E-05 29.3 10.4 65 30-94 260-349 (764)
454 PRK10115 protease 2; Provision 90.0 5.5 0.00012 28.5 8.7 57 61-118 128-189 (686)
455 PF14781 BBS2_N: Ciliary BBSom 89.9 2.1 4.6E-05 23.7 11.3 85 24-109 4-101 (136)
456 COG5308 NUP170 Nuclear pore co 89.9 3.1 6.6E-05 30.7 7.0 93 37-131 99-210 (1263)
457 PF05694 SBP56: 56kDa selenium 89.5 4.8 0.0001 27.1 13.4 128 3-130 161-342 (461)
458 KOG3616|consensus 89.4 1.9 4E-05 31.2 5.7 33 59-91 14-46 (1636)
459 PF14655 RAB3GAP2_N: Rab3 GTPa 89.4 4.8 0.0001 26.9 9.2 36 59-94 307-342 (415)
460 PF07995 GSDH: Glucose / Sorbo 88.7 4.6 0.0001 26.0 6.8 65 60-124 253-329 (331)
461 PF11715 Nup160: Nucleoporin N 88.7 1.9 4.1E-05 29.6 5.4 33 20-52 216-252 (547)
462 TIGR03032 conserved hypothetic 87.6 5.7 0.00012 25.6 7.6 52 64-118 207-258 (335)
463 PF07250 Glyoxal_oxid_N: Glyox 87.1 5.2 0.00011 24.6 10.0 120 3-122 50-191 (243)
464 smart00564 PQQ beta-propeller 86.9 1.2 2.7E-05 17.3 3.6 22 73-94 8-29 (33)
465 KOG2280|consensus 86.2 11 0.00023 27.4 8.9 50 40-90 64-113 (829)
466 KOG2247|consensus 85.9 0.28 6.1E-06 33.0 0.4 52 24-75 123-175 (615)
467 PHA02790 Kelch-like protein; P 85.8 8.9 0.00019 26.1 12.1 94 29-129 362-469 (480)
468 PF12768 Rax2: Cortical protei 85.5 7.1 0.00015 24.7 10.4 71 39-109 15-97 (281)
469 COG4880 Secreted protein conta 85.2 9.4 0.0002 25.8 9.1 76 16-91 425-505 (603)
470 COG5167 VID27 Protein involved 85.1 5.4 0.00012 27.6 5.7 58 30-88 573-631 (776)
471 KOG1897|consensus 85.0 14 0.00031 27.7 13.5 103 27-129 496-612 (1096)
472 COG5290 IkappaB kinase complex 85.0 5.6 0.00012 29.1 5.9 89 22-111 250-347 (1243)
473 TIGR03548 mutarot_permut cycli 84.8 8 0.00017 24.6 11.2 27 28-54 170-200 (323)
474 KOG1520|consensus 84.1 9.8 0.00021 25.1 9.5 100 19-118 115-236 (376)
475 PF10214 Rrn6: RNA polymerase 84.0 14 0.00031 26.9 8.6 69 60-129 146-231 (765)
476 COG3204 Uncharacterized protei 83.9 8.8 0.00019 24.5 11.6 120 9-128 117-261 (316)
477 KOG1520|consensus 83.7 8.3 0.00018 25.4 5.9 79 37-115 196-279 (376)
478 COG4590 ABC-type uncharacteriz 83.4 5.4 0.00012 27.2 5.2 73 16-89 218-299 (733)
479 PF08728 CRT10: CRT10; InterP 82.0 17 0.00037 26.4 7.4 73 16-88 161-245 (717)
480 PLN02153 epithiospecifier prot 81.8 11 0.00025 24.2 13.5 65 29-94 137-230 (341)
481 PF07250 Glyoxal_oxid_N: Glyox 81.2 10 0.00023 23.4 6.2 46 83-128 48-97 (243)
482 PRK13684 Ycf48-like protein; P 81.0 12 0.00027 24.1 14.1 103 18-123 172-281 (334)
483 PF01011 PQQ: PQQ enzyme repea 80.1 3.3 7.3E-05 17.0 3.8 21 74-94 3-23 (38)
484 PLN00033 photosystem II stabil 79.7 16 0.00034 24.5 13.0 100 22-124 242-350 (398)
485 PF11635 Med16: Mediator compl 79.6 22 0.00047 26.1 7.7 68 17-84 258-345 (753)
486 PF05787 DUF839: Bacterial pro 79.4 16 0.00035 25.4 6.5 21 98-118 499-519 (524)
487 PF05935 Arylsulfotrans: Aryls 78.2 19 0.00041 24.7 13.4 53 24-78 153-208 (477)
488 PF13570 PQQ_3: PQQ-like domai 76.4 4.6 0.0001 16.7 3.3 21 29-49 20-40 (40)
489 PF13449 Phytase-like: Esteras 76.2 18 0.00039 23.3 13.0 99 19-118 20-164 (326)
490 PLN02153 epithiospecifier prot 75.4 19 0.00041 23.2 13.6 66 29-94 85-172 (341)
491 PF13449 Phytase-like: Esteras 75.4 19 0.00041 23.2 13.4 98 21-118 87-232 (326)
492 PF01731 Arylesterase: Arylest 75.0 9.2 0.0002 19.4 6.5 30 101-130 54-84 (86)
493 PLN02193 nitrile-specifier pro 73.9 25 0.00055 24.0 13.6 90 29-120 278-386 (470)
494 PLN00033 photosystem II stabil 72.3 27 0.00058 23.5 12.9 106 17-127 279-396 (398)
495 PF11635 Med16: Mediator compl 72.0 37 0.0008 25.0 7.8 66 60-125 260-345 (753)
496 PF05787 DUF839: Bacterial pro 72.0 31 0.00067 24.1 6.5 19 58-76 500-518 (524)
497 KOG1230|consensus 71.4 29 0.00063 23.6 10.8 118 1-120 100-251 (521)
498 PF03022 MRJP: Major royal jel 70.5 24 0.00053 22.3 14.0 119 1-120 90-255 (287)
499 PHA02790 Kelch-like protein; P 69.8 33 0.00071 23.5 11.2 66 29-94 318-389 (480)
500 COG4880 Secreted protein conta 69.4 34 0.00073 23.5 8.0 86 42-129 408-502 (603)
No 1
>KOG0272|consensus
Probab=100.00 E-value=5.6e-34 Score=171.98 Aligned_cols=130 Identities=22% Similarity=0.331 Sum_probs=123.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
+++|++.+..++..+ +|..+|..++|+|+|++|++++.|.+-++||+.++.. ....+|...|.+++|+|||..+++|+
T Consensus 243 vklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGG 322 (459)
T KOG0272|consen 243 VKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGG 322 (459)
T ss_pred eeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccC
Confidence 589999988888888 8999999999999999999999999999999998874 55688999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|..-++||+++|+++ ++.+|...|..++|+|+|..+++|+.|++++|||++
T Consensus 323 lD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR 375 (459)
T KOG0272|consen 323 LDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLR 375 (459)
T ss_pred ccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeec
Confidence 9999999999999998 888899999999999999999999999999999997
No 2
>KOG0272|consensus
Probab=100.00 E-value=1.4e-31 Score=161.71 Aligned_cols=127 Identities=23% Similarity=0.383 Sum_probs=121.0
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc-CCCEEEEeC
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA-CGKWFVSTG 78 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~~~~~~ 78 (131)
||||+++|+++..+ +|..+|.+++|+|+|..+++|+.|+++++||++.... ..+.+|...|..++|+| .|+++++++
T Consensus 328 RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~Tas 407 (459)
T KOG0272|consen 328 RVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTAS 407 (459)
T ss_pred heeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcc
Confidence 79999999999998 9999999999999999999999999999999997764 77899999999999999 688999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
.|+++++|...+..++ .+.+|.+.|.+++.++++.++++++.|+++++|.
T Consensus 408 yD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 408 YDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred cCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 9999999999999988 7889999999999999999999999999999995
No 3
>KOG0279|consensus
Probab=99.97 E-value=3.1e-30 Score=149.16 Aligned_cols=130 Identities=17% Similarity=0.302 Sum_probs=119.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc--ccceEEEEEccC--CCEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH--ESCVLSLRFAAC--GKWFV 75 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~--~~~v~~~~~~~~--~~~~~ 75 (131)
+|+||+.+++....+ +|...|.+++|+||.+++++|+.|.++.+|+..+....++..+ ..-|.|+.|+|+ ...|+
T Consensus 87 lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Iv 166 (315)
T KOG0279|consen 87 LRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIV 166 (315)
T ss_pred EEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEE
Confidence 589999999988888 9999999999999999999999999999999988776665544 678999999997 77899
Q ss_pred EeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 76 STGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++.|+++++||+++-+.. ...+|.+.++.+++||||.+.++|+.||.+.+||++
T Consensus 167 s~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~ 222 (315)
T KOG0279|consen 167 SASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLN 222 (315)
T ss_pred EccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEcc
Confidence 9999999999999988877 777899999999999999999999999999999986
No 4
>KOG0263|consensus
Probab=99.97 E-value=4.4e-30 Score=164.36 Aligned_cols=129 Identities=19% Similarity=0.402 Sum_probs=122.0
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
++|.....++++.+ +|...|.++.|+|+..++++|+.|.++++||..++.. +.+.+|.++|.+++|||+|+++++|+.
T Consensus 518 rLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~e 597 (707)
T KOG0263|consen 518 RLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDE 597 (707)
T ss_pred eeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeeccc
Confidence 68998888888888 9999999999999999999999999999999998875 778899999999999999999999999
Q ss_pred CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+.|.+||+.+++.+ ...+|.+.+.++.|+.+|..|++++.|.+|++||+.
T Consensus 598 d~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~ 649 (707)
T KOG0263|consen 598 DGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLT 649 (707)
T ss_pred CCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEch
Confidence 999999999999888 778899999999999999999999999999999985
No 5
>KOG0263|consensus
Probab=99.97 E-value=1.6e-29 Score=161.86 Aligned_cols=131 Identities=15% Similarity=0.254 Sum_probs=123.2
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
||+|.+.+..++..+ +|..+|..+.|+|-|-++++++.|++.++|....... +.+.+|-+.+.|++|+|+..++++||
T Consensus 475 vRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGS 554 (707)
T KOG0263|consen 475 VRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGS 554 (707)
T ss_pred eeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCC
Confidence 689999999999888 9999999999999999999999999999999987664 66788999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 131 (131)
.|.++++||..+|..+ ...+|.++|.+++|||+|++|++|+.|+.|++||+.+
T Consensus 555 sD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~ 608 (707)
T KOG0263|consen 555 SDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLAN 608 (707)
T ss_pred CCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCC
Confidence 9999999999999988 6788999999999999999999999999999999863
No 6
>KOG0271|consensus
Probab=99.97 E-value=2.4e-29 Score=151.10 Aligned_cols=129 Identities=18% Similarity=0.335 Sum_probs=118.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEcc-----CCC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAA-----CGK 72 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~-----~~~ 72 (131)
+|+||..+..+..+. +|...|.+++|+|||+.|++|+.||+|++||..+++. ..+.+|...|.+++|.| ..+
T Consensus 139 vR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r 218 (480)
T KOG0271|consen 139 VRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCR 218 (480)
T ss_pred EEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCcc
Confidence 589999999999888 8999999999999999999999999999999988875 67899999999999986 567
Q ss_pred EEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 73 WFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.+++++.||.++|||+..+.++ .+.+|...|+|+.|..+ .++++++.|++|++|+..
T Consensus 219 ~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~ 276 (480)
T KOG0271|consen 219 RLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRAL 276 (480)
T ss_pred ceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC-ceEEecCCCceEEEEEcc
Confidence 8999999999999999988888 77889999999999655 578999999999999863
No 7
>KOG0271|consensus
Probab=99.96 E-value=4.8e-29 Score=149.85 Aligned_cols=115 Identities=17% Similarity=0.299 Sum_probs=107.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
+|.+.|.+++|+|+|..|++|+.|.++++||+.+... ....+|...|.+++|+|||+.|++|+.||.|.+||..+|+..
T Consensus 113 GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~ 192 (480)
T KOG0271|consen 113 GHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQI 192 (480)
T ss_pred CCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcc
Confidence 7999999999999999999999999999999988775 678999999999999999999999999999999999999988
Q ss_pred --EecCCCCCeEEEEECC-----CCCEEEEecCCCcEEEEEee
Q psy15612 95 --FQSKESSSVLSCDISA-----DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 95 --~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~vw~~~ 130 (131)
.+.+|...|.+++|.| ..+++++++.||.++|||+.
T Consensus 193 g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~ 235 (480)
T KOG0271|consen 193 GRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTK 235 (480)
T ss_pred cccccCcccceeEEeecccccCCCccceecccCCCCEEEEEcc
Confidence 7888999999999976 57899999999999999974
No 8
>KOG0266|consensus
Probab=99.96 E-value=1.9e-27 Score=151.66 Aligned_cols=130 Identities=18% Similarity=0.317 Sum_probs=117.9
Q ss_pred CEEEeCCCCc--eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC-C-eEEeeccccceEEEEEccCCCEEE
Q psy15612 1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP-D-KYQLHLHESCVLSLRFAACGKWFV 75 (131)
Q Consensus 1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~-~-~~~~~~~~~~v~~~~~~~~~~~~~ 75 (131)
+++|++.+.+ .+..+ +|...|..++|+|+++.+++++.|+++++||+... . .+.+.+|...|++++|+|+++.++
T Consensus 183 i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~ 262 (456)
T KOG0266|consen 183 IRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLV 262 (456)
T ss_pred EEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEE
Confidence 4788887666 55555 89999999999999999999999999999999443 4 477889999999999999999999
Q ss_pred EeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 76 STGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++.|+++++||++++++. .+.+|.+.|.+++|+++++++++++.|+.+++||+.
T Consensus 263 Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~ 318 (456)
T KOG0266|consen 263 SGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLE 318 (456)
T ss_pred EecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECC
Confidence 9999999999999999988 888899999999999999999999999999999974
No 9
>KOG0266|consensus
Probab=99.96 E-value=5.5e-27 Score=149.51 Aligned_cols=130 Identities=22% Similarity=0.418 Sum_probs=116.3
Q ss_pred CEEEeC-CCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSV-SPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~-~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++||+ ..+..++++ +|...|++++|+|+++.+++|+.|++|++||++++++ ..+..|...|.+++|+++++.++++
T Consensus 227 iriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~ 306 (456)
T KOG0266|consen 227 LRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSA 306 (456)
T ss_pred EEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEc
Confidence 689999 455788888 9999999999999999999999999999999999876 7789999999999999999999999
Q ss_pred CCCCeEEEeeCCCCc--eE-EecCCCC--CeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 78 GKDNLLNAWRTPYGA--SI-FQSKESS--SVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~--~~-~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+.|+.+++||+.++. +. ....+.. .+.+++|+|++.++++++.|+.+++||++
T Consensus 307 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~ 364 (456)
T KOG0266|consen 307 SYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLR 364 (456)
T ss_pred CCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEcc
Confidence 999999999999998 33 3333322 68999999999999999999999999985
No 10
>KOG0286|consensus
Probab=99.96 E-value=5.2e-27 Score=136.81 Aligned_cols=128 Identities=18% Similarity=0.253 Sum_probs=117.9
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
.+||+++++.+..+ +|.+.|.++.++| +++.+++|+.|+..++||++.+.+ +.+.+|++.|..++|.|+|.-|++|+
T Consensus 169 alWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGS 248 (343)
T KOG0286|consen 169 ALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGS 248 (343)
T ss_pred EEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecC
Confidence 48999999999998 9999999999999 899999999999999999998885 77899999999999999999999999
Q ss_pred CCCeEEEeeCCCCceEEec---CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 79 KDNLLNAWRTPYGASIFQS---KESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.|++.++||++..+.+... .....|.+++||..|++|+.|..|..+.+||.
T Consensus 249 DD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDt 302 (343)
T KOG0286|consen 249 DDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDT 302 (343)
T ss_pred CCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeec
Confidence 9999999999988877322 23577899999999999999999999999996
No 11
>KOG0279|consensus
Probab=99.95 E-value=7.1e-27 Score=135.38 Aligned_cols=129 Identities=16% Similarity=0.198 Sum_probs=112.1
Q ss_pred EEEeCC-----CCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEE
Q psy15612 2 YLQSVS-----PGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWF 74 (131)
Q Consensus 2 ~iwd~~-----~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~ 74 (131)
.+|++. .|..++.+ +|...|..+..++||++.++++.|+++++||+.+++. +.+.+|...|.+++|+||.+.+
T Consensus 41 i~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qi 120 (315)
T KOG0279|consen 41 IVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI 120 (315)
T ss_pred EEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCcee
Confidence 467654 46666667 8999999999999999999999999999999999875 7789999999999999999999
Q ss_pred EEeCCCCeEEEeeCCCCceEEec-C-CCCCeEEEEECCC--CCEEEEecCCCcEEEEEee
Q psy15612 75 VSTGKDNLLNAWRTPYGASIFQS-K-ESSSVLSCDISAD--DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~~~~~~-~-~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw~~~ 130 (131)
+++++|++|++|+.......... . +.+.|.|+.|+|+ ..++++++.|+++++||++
T Consensus 121 vSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~ 180 (315)
T KOG0279|consen 121 VSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLR 180 (315)
T ss_pred ecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccC
Confidence 99999999999999855444322 2 3789999999998 6789999999999999985
No 12
>KOG0285|consensus
Probab=99.95 E-value=3.5e-27 Score=140.99 Aligned_cols=131 Identities=18% Similarity=0.219 Sum_probs=123.2
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|+|||+.+|+...++ +|-+.|..+++++-..++++++.|+.|+.||++.++. +...+|-+.|++++.+|.-..+++++
T Consensus 175 ikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~g 254 (460)
T KOG0285|consen 175 IKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGG 254 (460)
T ss_pred eEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecC
Confidence 589999999998888 7999999999999999999999999999999998885 77889999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 131 (131)
+|..+++||+++...+ .+.+|...|.++.+.|....+++++.|++|++||+++
T Consensus 255 rDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~a 308 (460)
T KOG0285|consen 255 RDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRA 308 (460)
T ss_pred CcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeecc
Confidence 9999999999998888 7888999999999999888899999999999999975
No 13
>KOG0315|consensus
Probab=99.95 E-value=1e-26 Score=133.24 Aligned_cols=129 Identities=15% Similarity=0.218 Sum_probs=117.3
Q ss_pred CEEEeCCCCceeeeecCC-CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQHDFS-SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
||+|...+|.+..++.|+ +.|+.+++.|+++.|+.++. ..|++||+.+.. +..+.+|...|..+.|..+|+++++
T Consensus 22 IRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyT 100 (311)
T KOG0315|consen 22 IRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYT 100 (311)
T ss_pred eeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEe
Confidence 799999999999999665 57999999999999998875 569999998776 3678899999999999999999999
Q ss_pred eCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.||+++|||++...+.....+.++|.++..+|+...|+++..+|.|++||+.
T Consensus 101 gseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~ 154 (311)
T KOG0315|consen 101 GSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLG 154 (311)
T ss_pred cCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEcc
Confidence 999999999999987766777788999999999999999999999999999985
No 14
>PTZ00420 coronin; Provisional
Probab=99.95 E-value=1.5e-25 Score=144.58 Aligned_cols=130 Identities=18% Similarity=0.254 Sum_probs=109.2
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC---------eEEeeccccceEEEEEcc
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD---------KYQLHLHESCVLSLRFAA 69 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~---------~~~~~~~~~~v~~~~~~~ 69 (131)
|++|+......+..+ +|.+.|.+++|+|+ +..|++|+.|+.|++||+.+.. ...+.+|...|.+++|+|
T Consensus 56 I~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P 135 (568)
T PTZ00420 56 IRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNP 135 (568)
T ss_pred EEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECC
Confidence 356666555555555 89999999999997 7899999999999999997532 124577899999999999
Q ss_pred CCCEE-EEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 70 CGKWF-VSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 70 ~~~~~-~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++..+ ++++.|+.+++||+++++......+...+.+++|+|+|+++++++.|+.+++||++
T Consensus 136 ~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~R 197 (568)
T PTZ00420 136 MNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPR 197 (568)
T ss_pred CCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECC
Confidence 98764 68899999999999998877444567889999999999999999999999999985
No 15
>KOG0286|consensus
Probab=99.95 E-value=4.3e-26 Score=133.01 Aligned_cols=127 Identities=22% Similarity=0.336 Sum_probs=116.4
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc---ccceEEEEEccCCCEEEEe
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH---ESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~ 77 (131)
++||++.+.+.+.+ +|+..|++++|.|+|.-+++|+.|++.++||++..+...+..+ ...|.+++||..|++++.+
T Consensus 212 klWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfag 291 (343)
T KOG0286|consen 212 KLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAG 291 (343)
T ss_pred eeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEee
Confidence 79999999999998 9999999999999999999999999999999998775333333 4578999999999999999
Q ss_pred CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 78 GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
..|.++.+||.-.++.. .+.+|..+|.++..+|+|.-+++|+.|.++++|.
T Consensus 292 y~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 292 YDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred ecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 99999999999989888 8889999999999999999999999999999994
No 16
>KOG0291|consensus
Probab=99.95 E-value=7e-26 Score=145.62 Aligned_cols=128 Identities=24% Similarity=0.381 Sum_probs=112.3
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
-+|+.++..-+... +|...+.+++++|||+.+++|+.|++|++||..++-+ .++..|.+.|..+.|+..|+.+++++-
T Consensus 333 lVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSL 412 (893)
T KOG0291|consen 333 LVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSL 412 (893)
T ss_pred EEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeec
Confidence 57887766555444 8999999999999999999999999999999998876 678899999999999999999999999
Q ss_pred CCeEEEeeCC--------------------------------------------CCceE-EecCCCCCeEEEEECCCCCE
Q psy15612 80 DNLLNAWRTP--------------------------------------------YGASI-FQSKESSSVLSCDISADDKY 114 (131)
Q Consensus 80 ~~~i~~w~~~--------------------------------------------~~~~~-~~~~~~~~v~~~~~~~~~~~ 114 (131)
||+++.||+. +|+.+ .+.+|.++|.+++|+|.+..
T Consensus 413 DGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~ 492 (893)
T KOG0291|consen 413 DGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSL 492 (893)
T ss_pred CCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCe
Confidence 9998888843 44444 44589999999999999999
Q ss_pred EEEecCCCcEEEEEe
Q psy15612 115 IVTGSGDKKATVYEV 129 (131)
Q Consensus 115 l~~~~~d~~i~vw~~ 129 (131)
|++++.|.+|++||+
T Consensus 493 LaS~SWDkTVRiW~i 507 (893)
T KOG0291|consen 493 LASGSWDKTVRIWDI 507 (893)
T ss_pred EEeccccceEEEEEe
Confidence 999999999999997
No 17
>KOG0645|consensus
Probab=99.95 E-value=2.1e-25 Score=128.99 Aligned_cols=129 Identities=17% Similarity=0.247 Sum_probs=112.9
Q ss_pred CEEEeCCCC---ceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCC
Q psy15612 1 MYLQSVSPG---RQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGK 72 (131)
Q Consensus 1 i~iwd~~~~---~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~ 72 (131)
||+|++..+ .+...+ +|...|.+++|+|.|++|++++.|.++.+|.-..++. ..+.+|+.+|.+++|+++|+
T Consensus 39 vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~ 118 (312)
T KOG0645|consen 39 VRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGN 118 (312)
T ss_pred EEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCC
Confidence 689998743 334444 6889999999999999999999999999999876652 56789999999999999999
Q ss_pred EEEEeCCCCeEEEeeCCCCceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 73 WFVSTGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+|+++++|+.+.+|....+... .+.+|.+.|..+.|+|...+|++++.|.+|++|+-
T Consensus 119 ~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~ 179 (312)
T KOG0645|consen 119 YLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRD 179 (312)
T ss_pred EEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEee
Confidence 9999999999999998754432 77889999999999999999999999999999963
No 18
>KOG0315|consensus
Probab=99.95 E-value=1.1e-25 Score=129.02 Aligned_cols=130 Identities=18% Similarity=0.248 Sum_probs=113.9
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE---------------------------
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY--------------------------- 53 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~--------------------------- 53 (131)
+||||++...+.+.+.+..+|+++..+|+...|+++..+|.|++||+....+.
T Consensus 107 ~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~n 186 (311)
T KOG0315|consen 107 VKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAAN 186 (311)
T ss_pred EEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEec
Confidence 58999999888888899999999999999999999999999999998754210
Q ss_pred -----------------------EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC-ceE-EecCCCCCeEEEEE
Q psy15612 54 -----------------------QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG-ASI-FQSKESSSVLSCDI 108 (131)
Q Consensus 54 -----------------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~-~~~-~~~~~~~~v~~~~~ 108 (131)
+++.|.+.+..+.+|||++++++++.|.+++||+..+- +.. .+.+|...+...+|
T Consensus 187 nkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~F 266 (311)
T KOG0315|consen 187 NKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAF 266 (311)
T ss_pred CCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeee
Confidence 24467888999999999999999999999999999876 222 66778899999999
Q ss_pred CCCCCEEEEecCCCcEEEEEee
Q psy15612 109 SADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 109 ~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|.+|+||++++.|+.+++|++.
T Consensus 267 S~dg~YlvTassd~~~rlW~~~ 288 (311)
T KOG0315|consen 267 SADGEYLVTASSDHTARLWDLS 288 (311)
T ss_pred ccCccEEEecCCCCceeecccc
Confidence 9999999999999999999974
No 19
>KOG0295|consensus
Probab=99.94 E-value=1.2e-25 Score=134.31 Aligned_cols=130 Identities=18% Similarity=0.233 Sum_probs=118.7
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccC--------
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAAC-------- 70 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~-------- 70 (131)
|+.|+..++.++.++ +|.+.|..++.+.||..+++++.|.++++|-+.+..+ ..+..|+..+.+++|.|.
T Consensus 217 ik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~ 296 (406)
T KOG0295|consen 217 IKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISE 296 (406)
T ss_pred eeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhh
Confidence 589999999999999 8999999999999999999999999999999998876 445678888999998752
Q ss_pred -------CCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 71 -------GKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 71 -------~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.+.++++|++|++||+.+|.++ .+.+|...|..++|+|.|+||++..+|+++++||++
T Consensus 297 at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~ 364 (406)
T KOG0295|consen 297 ATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLK 364 (406)
T ss_pred ccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEec
Confidence 257889999999999999999999 788899999999999999999999999999999985
No 20
>PTZ00421 coronin; Provisional
Probab=99.94 E-value=5.1e-25 Score=140.92 Aligned_cols=115 Identities=19% Similarity=0.254 Sum_probs=103.5
Q ss_pred cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCC--------eEEeeccccceEEEEEccCC-CEEEEeCCCCeEEE
Q psy15612 16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPD--------KYQLHLHESCVLSLRFAACG-KWFVSTGKDNLLNA 85 (131)
Q Consensus 16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~ 85 (131)
+|.+.|.+++|+| +++.|++++.|++|++||+.... ...+.+|...|.+++|+|++ +.+++++.|+.|++
T Consensus 73 GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrI 152 (493)
T PTZ00421 73 GQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNV 152 (493)
T ss_pred CCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEE
Confidence 7899999999999 88899999999999999997542 34567899999999999985 68999999999999
Q ss_pred eeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 86 WRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 86 w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
||+.+++.. ....|...|.+++|+|+++++++++.|++|++||++
T Consensus 153 WDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~r 198 (493)
T PTZ00421 153 WDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPR 198 (493)
T ss_pred EECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECC
Confidence 999998877 556788999999999999999999999999999975
No 21
>KOG0284|consensus
Probab=99.94 E-value=8.2e-27 Score=140.97 Aligned_cols=130 Identities=17% Similarity=0.289 Sum_probs=115.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++|+.......... .|.+.|.+++|+|....+++++.|+.+++||....+. ..+.+|...|.+++|+|....+++++
T Consensus 162 iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgs 241 (464)
T KOG0284|consen 162 IKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGS 241 (464)
T ss_pred EEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEcc
Confidence 567776544333333 4558999999999999999999999999999987764 66789999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||.++|+++ .+..|...|..+.|+|++++|++++.|..++++|++
T Consensus 242 kDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR 294 (464)
T KOG0284|consen 242 KDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIR 294 (464)
T ss_pred CCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehh
Confidence 9999999999999999 788899999999999999999999999999999987
No 22
>KOG0292|consensus
Probab=99.94 E-value=6.2e-26 Score=148.26 Aligned_cols=129 Identities=16% Similarity=0.295 Sum_probs=123.9
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||-+-+.++..+ +|.++|..+.|+|++.++++|+.|..|++|+..+.++ .++.+|-..|..+.|++.-++|+++|
T Consensus 33 IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSAS 112 (1202)
T KOG0292|consen 33 IQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSAS 112 (1202)
T ss_pred eeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEcc
Confidence 689999999999888 9999999999999999999999999999999998886 67899999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.|-+|+||++++++++ .+.+|..-|.|..|+|....++++|-|.+|+|||+
T Consensus 113 DDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDi 164 (1202)
T KOG0292|consen 113 DDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDI 164 (1202)
T ss_pred CCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEee
Confidence 9999999999999999 88999999999999999999999999999999997
No 23
>KOG0273|consensus
Probab=99.94 E-value=4.8e-25 Score=135.37 Aligned_cols=130 Identities=18% Similarity=0.351 Sum_probs=115.4
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCC-------
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACG------- 71 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~------- 71 (131)
|+++-+...++..++ +|.++|.++.|+|.+.+|++++.|+++++|....... ..+..|...|+.+.|+|.|
T Consensus 341 i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~ 420 (524)
T KOG0273|consen 341 IHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPN 420 (524)
T ss_pred EEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCc
Confidence 355666666777777 8999999999999999999999999999999876654 6688999999999999864
Q ss_pred --CEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 72 --KWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 72 --~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
..+++++.|+++++||+..+.++ .+..|..+|.+++|+|+|+++++|+.|+.|.+|+.+
T Consensus 421 ~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~ 482 (524)
T KOG0273|consen 421 MNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTK 482 (524)
T ss_pred CCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecccc
Confidence 45889999999999999999999 666899999999999999999999999999999875
No 24
>KOG0278|consensus
Probab=99.93 E-value=1.2e-24 Score=125.03 Aligned_cols=129 Identities=20% Similarity=0.252 Sum_probs=115.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
||+||.++++.++.+..+..|.++.++++|++|.++ ..+.|.+||..+....+....+..|.+..++|+...+++|+.|
T Consensus 167 VRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged 245 (334)
T KOG0278|consen 167 VRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGED 245 (334)
T ss_pred eEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCccccccccccCCCceEEecCcc
Confidence 699999999999999999999999999999987665 4567999999988765555556678889999999999999999
Q ss_pred CeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 81 NLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 81 ~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
..++.||..+++.+ +.++|.++|.|+.|+|+|...++|+.||+|++|...
T Consensus 246 ~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 246 FKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTT 297 (334)
T ss_pred eEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEec
Confidence 99999999999998 458899999999999999999999999999999863
No 25
>PTZ00421 coronin; Provisional
Probab=99.93 E-value=8.5e-24 Score=135.40 Aligned_cols=130 Identities=15% Similarity=0.194 Sum_probs=107.5
Q ss_pred CEEEeCCCCc-------eeeee-cCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccC
Q psy15612 1 MYLQSVSPGR-------QLQQH-DFSSQIFSLGYCPSG-EWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAAC 70 (131)
Q Consensus 1 i~iwd~~~~~-------~~~~~-~~~~~v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~ 70 (131)
|++||+.++. .+..+ +|...|.+++|+|++ ..|++++.|+.|++||+.++.. ..+..|...|.+++|+|+
T Consensus 100 IkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spd 179 (493)
T PTZ00421 100 IMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLD 179 (493)
T ss_pred EEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECC
Confidence 6899997652 34445 799999999999985 6899999999999999998775 556778899999999999
Q ss_pred CCEEEEeCCCCeEEEeeCCCCceE-EecCCCCC-eEEEEECCCCCEEEEec----CCCcEEEEEee
Q psy15612 71 GKWFVSTGKDNLLNAWRTPYGASI-FQSKESSS-VLSCDISADDKYIVTGS----GDKKATVYEVI 130 (131)
Q Consensus 71 ~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~-v~~~~~~~~~~~l~~~~----~d~~i~vw~~~ 130 (131)
|+.+++++.|+.+++||+++++.+ ....|.+. ...+.|.+++..+++++ .|+.|++||++
T Consensus 180 G~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr 245 (493)
T PTZ00421 180 GSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTR 245 (493)
T ss_pred CCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCC
Confidence 999999999999999999998877 44556543 45778898877776543 47899999985
No 26
>KOG0282|consensus
Probab=99.92 E-value=4.9e-25 Score=135.49 Aligned_cols=130 Identities=12% Similarity=0.200 Sum_probs=118.2
Q ss_pred CEEEeCCC-Cceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCC-CEEEEe
Q psy15612 1 MYLQSVSP-GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACG-KWFVST 77 (131)
Q Consensus 1 i~iwd~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~ 77 (131)
|+||++.. +++++++ +|..+|.+++|+++|..+++++.|..+++||.+++++.........+.++.|+|++ +.+++|
T Consensus 239 vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G 318 (503)
T KOG0282|consen 239 VKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVG 318 (503)
T ss_pred EEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEe
Confidence 68999986 8888888 99999999999999999999999999999999999986655566778999999998 778899
Q ss_pred CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 78 GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+.|+.|+.||+++++.+ ....|-+.+..+.|-++|+.+++++.|+.+++|+.+
T Consensus 319 ~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~ 372 (503)
T KOG0282|consen 319 GSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENR 372 (503)
T ss_pred cCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcC
Confidence 99999999999999977 455678999999999999999999999999999865
No 27
>KOG0284|consensus
Probab=99.92 E-value=6.6e-25 Score=132.83 Aligned_cols=129 Identities=16% Similarity=0.240 Sum_probs=117.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|+|||....+....+ +|.-.|.+++|+|....+++++.|..|++||.+++.+ ..+..|+..|..+.|+|++++|++++
T Consensus 204 ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~s 283 (464)
T KOG0284|consen 204 IKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGS 283 (464)
T ss_pred EEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEcc
Confidence 689999988887777 8999999999999999999999999999999999886 77889999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~ 129 (131)
+|..++++|+++-+.+ ...+|...+.++.|+|- ..+|.+|+.||.+..|.+
T Consensus 284 kD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v 336 (464)
T KOG0284|consen 284 KDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVV 336 (464)
T ss_pred CCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEec
Confidence 9999999999976666 66779999999999995 457788899999999975
No 28
>KOG0319|consensus
Probab=99.92 E-value=1e-23 Score=135.25 Aligned_cols=128 Identities=19% Similarity=0.268 Sum_probs=121.3
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
.+||++++.+...++ +|...|.++.|+|..+.+++++.|.+|++|.+.+..+ .++.+|...|..+.|-.+|+.+++++
T Consensus 487 aKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~ 566 (775)
T KOG0319|consen 487 AKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAG 566 (775)
T ss_pred eeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEecc
Confidence 379999988888888 9999999999999999999999999999999999987 67889999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
.||.+++|++.++++. .+..|..+|+.++.+|....+++|+.|+.|.+|.
T Consensus 567 adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 567 ADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred CCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEee
Confidence 9999999999999998 7788999999999999999999999999999994
No 29
>KOG0273|consensus
Probab=99.92 E-value=2.6e-23 Score=127.91 Aligned_cols=131 Identities=18% Similarity=0.279 Sum_probs=119.1
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCC---------EEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE---------WLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA 69 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~---------~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~ 69 (131)
++||++........+ .|...|+.+.|+|.|. .+++++.|++|++||+..+.+ ..+..|..+|++++|+|
T Consensus 383 lkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~ 462 (524)
T KOG0273|consen 383 LKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSP 462 (524)
T ss_pred eEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecC
Confidence 589998888888777 8999999999999644 588999999999999998886 67789999999999999
Q ss_pred CCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612 70 CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 70 ~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 131 (131)
+|+++++|+.|+.+.+|+.++++........+.|..++|+.+|.++.....|+.+.+.|+|+
T Consensus 463 ~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr~ 524 (524)
T KOG0273|consen 463 NGRYLASGSLDGCVHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLGACASDGSVCVLDLRK 524 (524)
T ss_pred CCcEEEecCCCCeeEeccccchheeEeecCCCeEEEEEEcCCCCEEEEEecCCCceEEEecC
Confidence 99999999999999999999999987767778899999999999998888899999999986
No 30
>KOG0289|consensus
Probab=99.92 E-value=2.5e-23 Score=126.99 Aligned_cols=130 Identities=14% Similarity=0.206 Sum_probs=114.6
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccc---cceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHE---SCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~ 76 (131)
|++|......+.... .|.++|+.+..+|.|.++++++.|+...+.|++++.......++ -.+.+.+|+|||..|.+
T Consensus 285 i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgt 364 (506)
T KOG0289|consen 285 IRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGT 364 (506)
T ss_pred EEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEec
Confidence 578888766555444 89999999999999999999999999999999998865443332 35889999999999999
Q ss_pred eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+..|+.+++||+.++... ...+|.++|..++|+.+|-+|++++.|+.|++||+|
T Consensus 365 gt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLR 419 (506)
T KOG0289|consen 365 GTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLR 419 (506)
T ss_pred cCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEeh
Confidence 999999999999988877 667799999999999999999999999999999997
No 31
>KOG0276|consensus
Probab=99.92 E-value=6.9e-24 Score=134.49 Aligned_cols=129 Identities=15% Similarity=0.205 Sum_probs=116.4
Q ss_pred CEEEeCCCCc-eeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc--CCCEE
Q psy15612 1 MYLQSVSPGR-QLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA--CGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~-~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~--~~~~~ 74 (131)
|++||.+.+- +.+++ +|..-|++++|+| |.+.+++++-|++|++|.+.+... .++.+|...|.++.+-+ |.+++
T Consensus 121 iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpyl 200 (794)
T KOG0276|consen 121 IKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYL 200 (794)
T ss_pred EEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceE
Confidence 6899998654 44556 8999999999999 577899999999999999998876 77899999999999987 45799
Q ss_pred EEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 75 VSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++++.|..+++||.++..++ .+.+|...|..+.|+|.=..+++|++||++++|+-
T Consensus 201 IsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs 256 (794)
T KOG0276|consen 201 ISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNS 256 (794)
T ss_pred EecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecC
Confidence 99999999999999999998 78889999999999999999999999999999974
No 32
>KOG0291|consensus
Probab=99.92 E-value=1.8e-23 Score=134.74 Aligned_cols=130 Identities=17% Similarity=0.210 Sum_probs=114.9
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-E-------------------------
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-Y------------------------- 53 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~------------------------- 53 (131)
|++||...+-|..++ +|+..|..+.|+..|+.+++.+.||+|+.||+...+. +
T Consensus 374 VKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG 453 (893)
T KOG0291|consen 374 VKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAG 453 (893)
T ss_pred EEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEee
Confidence 689999999999999 9999999999999999999999999999999864431 0
Q ss_pred -------------------EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCC
Q psy15612 54 -------------------QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDK 113 (131)
Q Consensus 54 -------------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~ 113 (131)
.+.+|+++|.++.|+|+++.++++++|++|++||+-..... ........+..++|+|+|+
T Consensus 454 ~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~ 533 (893)
T KOG0291|consen 454 AQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGK 533 (893)
T ss_pred ccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCCCC
Confidence 13479999999999999999999999999999999765444 4556778899999999999
Q ss_pred EEEEecCCCcEEEEEee
Q psy15612 114 YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 114 ~l~~~~~d~~i~vw~~~ 130 (131)
.++++.-||.|.+||+.
T Consensus 534 elaVaTldgqItf~d~~ 550 (893)
T KOG0291|consen 534 ELAVATLDGQITFFDIK 550 (893)
T ss_pred eEEEEEecceEEEEEhh
Confidence 99999999999999974
No 33
>PTZ00420 coronin; Provisional
Probab=99.92 E-value=1.4e-22 Score=130.94 Aligned_cols=130 Identities=9% Similarity=0.066 Sum_probs=102.7
Q ss_pred CEEEeCCCCc--------eeeee-cCCCCeEEEEECCCCCE-EEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccC
Q psy15612 1 MYLQSVSPGR--------QLQQH-DFSSQIFSLGYCPSGEW-LAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAAC 70 (131)
Q Consensus 1 i~iwd~~~~~--------~~~~~-~~~~~v~~~~~~~~~~~-l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (131)
|++||+.++. .+..+ +|...|.+++|+|++.. +++++.|+.|++||++++.......+...+.+++|+|+
T Consensus 99 IrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~Slswspd 178 (568)
T PTZ00420 99 IRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIK 178 (568)
T ss_pred EEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCC
Confidence 6899997642 22334 78899999999999876 46889999999999998875332335678999999999
Q ss_pred CCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeE-----EEEECCCCCEEEEecCC----CcEEEEEee
Q psy15612 71 GKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVL-----SCDISADDKYIVTGSGD----KKATVYEVI 130 (131)
Q Consensus 71 ~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~-----~~~~~~~~~~l~~~~~d----~~i~vw~~~ 130 (131)
|+.+++++.|+.+++||+++++.+ ...+|.+.+. ...|++++.++++++.| ++|++||++
T Consensus 179 G~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr 248 (568)
T PTZ00420 179 GNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLK 248 (568)
T ss_pred CCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECC
Confidence 999999999999999999998877 4556765543 23456888888887765 479999986
No 34
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=1.2e-22 Score=137.16 Aligned_cols=129 Identities=12% Similarity=0.201 Sum_probs=110.3
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEc-cCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA-ACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~ 77 (131)
|++||+.+++.+..+ +|.+.|.+++|+| ++..|++++.|+.+++||+.++.......+...+.++.|+ +++..++++
T Consensus 557 v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~latg 636 (793)
T PLN00181 557 VQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFG 636 (793)
T ss_pred EEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEE
Confidence 589999999888777 8999999999997 7889999999999999999887753332344678999995 579999999
Q ss_pred CCCCeEEEeeCCCCce-E-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 78 GKDNLLNAWRTPYGAS-I-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~-~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+.|+.|++||+++++. . ...+|...|.++.|. ++.++++++.|++|++||++
T Consensus 637 s~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~ 690 (793)
T PLN00181 637 SADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLS 690 (793)
T ss_pred eCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCC
Confidence 9999999999987653 3 556789999999997 67889999999999999974
No 35
>KOG0295|consensus
Probab=99.91 E-value=4e-23 Score=123.65 Aligned_cols=129 Identities=20% Similarity=0.336 Sum_probs=117.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCC---------------CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS---------------GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVL 63 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~---------------~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~ 63 (131)
|++|-+.++++...+ +|+.+|.+++|.|. ++.+.+++.|+++++||+.++.+ .++.+|...|.
T Consensus 259 l~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr 338 (406)
T KOG0295|consen 259 LRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVR 338 (406)
T ss_pred EEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceee
Confidence 578999988888777 88999999999662 25789999999999999999986 78899999999
Q ss_pred EEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 64 SLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.++|+|.|++|+++..|+++++||+++++++ ....|...+.+++|+.+..++++|+-|.++++|.-
T Consensus 339 ~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 339 GVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred eeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 9999999999999999999999999999998 66689999999999999999999999999999974
No 36
>KOG0319|consensus
Probab=99.91 E-value=2.4e-23 Score=133.57 Aligned_cols=130 Identities=12% Similarity=0.227 Sum_probs=115.8
Q ss_pred CEEEeCCCCc----eeee------ecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc
Q psy15612 1 MYLQSVSPGR----QLQQ------HDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA 69 (131)
Q Consensus 1 i~iwd~~~~~----~~~~------~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~ 69 (131)
|++|++...+ ++.. ..|...|++++++|+.+++++|+.|.+.++|+++.... ..+.+|...+.++.|+|
T Consensus 436 lK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~ 515 (775)
T KOG0319|consen 436 LKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSK 515 (775)
T ss_pred EEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEecc
Confidence 5789886521 1111 15889999999999999999999999999999996665 67899999999999999
Q ss_pred CCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 70 CGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 70 ~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
..+.++++|.|.+++||.+.+..++ ...+|...|...+|-.+|+.|++++.||.+++|++.
T Consensus 516 ~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnik 577 (775)
T KOG0319|consen 516 NDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIK 577 (775)
T ss_pred ccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEecc
Confidence 9999999999999999999999999 777899999999999999999999999999999973
No 37
>KOG0269|consensus
Probab=99.91 E-value=1e-23 Score=135.90 Aligned_cols=130 Identities=13% Similarity=0.268 Sum_probs=111.2
Q ss_pred CEEEeCCC---Cceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc-CCCE
Q psy15612 1 MYLQSVSP---GRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA-CGKW 73 (131)
Q Consensus 1 i~iwd~~~---~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~ 73 (131)
|-+||+.. .+.+..+ +|...+..+.|++. ...|++|+.|+.|++||++...- ..+.+....|++++|+| .+..
T Consensus 112 i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~ 191 (839)
T KOG0269|consen 112 ISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNK 191 (839)
T ss_pred EEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCce
Confidence 46899976 3444455 89999999999985 55788999999999999987764 45566778899999999 5778
Q ss_pred EEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+++...|.+++||++..... .+..|.+.|.++.|+|++.+|++|+.|+.++|||..
T Consensus 192 F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t 250 (839)
T KOG0269|consen 192 FASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMT 250 (839)
T ss_pred EEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEecc
Confidence 999999999999999977655 677899999999999999999999999999999963
No 38
>KOG0265|consensus
Probab=99.91 E-value=6.7e-23 Score=120.11 Aligned_cols=115 Identities=21% Similarity=0.346 Sum_probs=102.7
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS 93 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 93 (131)
+|++.|+.+.|+|+|..+++++.|..|.+|+..... .-.+.+|.+.|..+.|.+|++.+++++.|.+++.||.++|+.
T Consensus 45 gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~ 124 (338)
T KOG0265|consen 45 GHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKR 124 (338)
T ss_pred CCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEeccccee
Confidence 799999999999999999999999999999986554 355679999999999999999999999999999999999999
Q ss_pred E-EecCCCCCeEEEEECCCCCE-EEEecCCCcEEEEEee
Q psy15612 94 I-FQSKESSSVLSCDISADDKY-IVTGSGDKKATVYEVI 130 (131)
Q Consensus 94 ~-~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~vw~~~ 130 (131)
. ....|...+..+.-+.-|.. +.+++.|+++++||+|
T Consensus 125 ~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R 163 (338)
T KOG0265|consen 125 IRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIR 163 (338)
T ss_pred eehhccccceeeecCccccCCeEEEecCCCceEEEEeec
Confidence 8 67789999998886555554 5678889999999997
No 39
>KOG0277|consensus
Probab=99.91 E-value=7e-23 Score=117.89 Aligned_cols=130 Identities=16% Similarity=0.359 Sum_probs=110.6
Q ss_pred CEEEeCCC-Cceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEcc-CCCEEE
Q psy15612 1 MYLQSVSP-GRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAA-CGKWFV 75 (131)
Q Consensus 1 i~iwd~~~-~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~~~ 75 (131)
+++||+.. ..++..+ +|..+|.++.|++. ++.+++++.|++|++|+...+. +.++.+|...|+..+|+| .++.++
T Consensus 85 Lrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfa 164 (311)
T KOG0277|consen 85 LRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFA 164 (311)
T ss_pred EEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEE
Confidence 58999653 4566666 89999999999985 5567778999999999987655 688899999999999999 477899
Q ss_pred EeCCCCeEEEeeCCC-CceEEecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612 76 STGKDNLLNAWRTPY-GASIFQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++.|+.+++||++. |+.+....|...+.++.|+. +.+.+++++.|+.|+.||+|
T Consensus 165 s~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir 221 (311)
T KOG0277|consen 165 SASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIR 221 (311)
T ss_pred EccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehh
Confidence 999999999999975 55667777889999999997 56678999999999999997
No 40
>KOG0282|consensus
Probab=99.91 E-value=4.5e-23 Score=126.99 Aligned_cols=130 Identities=16% Similarity=0.303 Sum_probs=111.6
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSG-EWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++|+++..+.....+.++.|+|++ +.+++|+.|+.|+.||++++++ +....|-+.+..+.|-++|+.+++++
T Consensus 282 lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissS 361 (503)
T KOG0282|consen 282 LKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSS 361 (503)
T ss_pred eeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeec
Confidence 689999999999999888899999999998 7788999999999999999986 56677889999999999999999999
Q ss_pred CCCeEEEeeCCCCceEEec-----------------------------------------------CC--CCCeEEEEEC
Q psy15612 79 KDNLLNAWRTPYGASIFQS-----------------------------------------------KE--SSSVLSCDIS 109 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~~-----------------------------------------------~~--~~~v~~~~~~ 109 (131)
.|+.+++|+.+.+..+... +| .+--..+.||
T Consensus 362 Ddks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fS 441 (503)
T KOG0282|consen 362 DDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFS 441 (503)
T ss_pred cCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEc
Confidence 9999999996644332000 11 2445688999
Q ss_pred CCCCEEEEecCCCcEEEEEee
Q psy15612 110 ADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 110 ~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|||++|++|+.||.+.+||.+
T Consensus 442 pDG~~l~SGdsdG~v~~wdwk 462 (503)
T KOG0282|consen 442 PDGRTLCSGDSDGKVNFWDWK 462 (503)
T ss_pred CCCCeEEeecCCccEEEeech
Confidence 999999999999999999964
No 41
>KOG0277|consensus
Probab=99.90 E-value=6.6e-23 Score=117.98 Aligned_cols=130 Identities=15% Similarity=0.226 Sum_probs=113.6
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEcc-CCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAA-CGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~~~~ 76 (131)
|++||..-++.+.++ +|+..|+...|+|. +..+++++.|+.+++||++..- ...+..|..++.++.|+. +.+.+++
T Consensus 129 iKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~T 208 (311)
T KOG0277|consen 129 IKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLAT 208 (311)
T ss_pred eEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEe
Confidence 689999888888888 99999999999995 7788999999999999997543 455888999999999998 5667889
Q ss_pred eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~ 130 (131)
++.|+.|+.||+++-+.. .+.+|+-.|..+.|||.. ..|++++.|-++++||..
T Consensus 209 g~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~ 265 (311)
T KOG0277|consen 209 GGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPE 265 (311)
T ss_pred cCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccc
Confidence 999999999999986655 677899999999999964 578899999999999863
No 42
>KOG0296|consensus
Probab=99.90 E-value=6.7e-22 Score=118.47 Aligned_cols=129 Identities=19% Similarity=0.259 Sum_probs=115.6
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
.+|++.+++....+ +|...|.++.|+.+|.+|++|+.+|.|.+|+..++.. ..+...-..+.=+.|+|.+..++.|+.
T Consensus 89 flW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~ 168 (399)
T KOG0296|consen 89 FLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGST 168 (399)
T ss_pred EEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecC
Confidence 58999999977777 9999999999999999999999999999999998875 445545567788999999999999999
Q ss_pred CCeEEEeeCCCCce-EEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 80 DNLLNAWRTPYGAS-IFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 80 ~~~i~~w~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+.+.+|.+.++.. ....+|..++.+-.|.|+|+.++++..|++|++||+.
T Consensus 169 DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~k 220 (399)
T KOG0296|consen 169 DGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPK 220 (399)
T ss_pred CCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecC
Confidence 99999999998544 4778899999999999999999999999999999973
No 43
>KOG0318|consensus
Probab=99.90 E-value=6.9e-22 Score=123.21 Aligned_cols=123 Identities=20% Similarity=0.335 Sum_probs=107.6
Q ss_pred CCceeeee-cCCCCeEEEEECCCCCE-EEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEE
Q psy15612 8 PGRQLQQH-DFSSQIFSLGYCPSGEW-LAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLN 84 (131)
Q Consensus 8 ~~~~~~~~-~~~~~v~~~~~~~~~~~-l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~ 84 (131)
+|..+..+ +|...|+++.|-|...+ +++++.|+.+.+|+-...+. ..+..|...|.+++|+|||..+++++.|+++.
T Consensus 136 SG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~ 215 (603)
T KOG0318|consen 136 SGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIY 215 (603)
T ss_pred CCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEE
Confidence 45555555 89999999999998774 78999999999998766664 45667888999999999999999999999999
Q ss_pred EeeCCCCceE-Eec---CCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 85 AWRTPYGASI-FQS---KESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 85 ~w~~~~~~~~-~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+||-.+|+.+ .+. +|.+.|..++|+||++.+++++.|.++++||+.
T Consensus 216 iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs 265 (603)
T KOG0318|consen 216 IYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVS 265 (603)
T ss_pred EEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEee
Confidence 9999999988 443 699999999999999999999999999999974
No 44
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.90 E-value=1e-21 Score=117.81 Aligned_cols=128 Identities=22% Similarity=0.336 Sum_probs=112.4
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++.+..+ .+...+.++.|+|+++.+++++.++.+.+||+...+. ..+..|...+.++.|+|++.++++++
T Consensus 159 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 238 (289)
T cd00200 159 IKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGS 238 (289)
T ss_pred EEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEc
Confidence 579999988887777 6777999999999999999998899999999987765 44447888999999999988888888
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
.++.+++|+..+++.. ....+...+.+++|+|+++++++++.|+.+++|+
T Consensus 239 ~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 239 EDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred CCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 8999999999987776 4557888999999999999999999999999996
No 45
>KOG0265|consensus
Probab=99.90 E-value=1.6e-22 Score=118.56 Aligned_cols=131 Identities=15% Similarity=0.262 Sum_probs=116.2
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|+.||+++|+++..+ .|..-|+++.-+.-|. ++.+++.|+++++||+++....+....+-++..+.|...+..+.+++
T Consensus 114 v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sgg 193 (338)
T KOG0265|consen 114 VRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGG 193 (338)
T ss_pred EEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeecc
Confidence 578999999999888 8889999998544444 56778999999999999888655555677899999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 131 (131)
-|+.|++||++....+ .+.+|.+.|..+..+|+|.++.+-+.|.++++||+++
T Consensus 194 Idn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp 247 (338)
T KOG0265|consen 194 IDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRP 247 (338)
T ss_pred ccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecc
Confidence 9999999999988888 7889999999999999999999999999999999984
No 46
>KOG0281|consensus
Probab=99.90 E-value=2.5e-23 Score=124.63 Aligned_cols=123 Identities=24% Similarity=0.383 Sum_probs=108.8
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||..+-++...+ +|.+.|.++.| +.+.+++|+.|.+|++||..++++ ..+..|...|..+.|+ ..++++++
T Consensus 219 ikiWD~n~~~c~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcS 294 (499)
T KOG0281|consen 219 IKIWDKNSLECLKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCS 294 (499)
T ss_pred eEEeccccHHHHHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEec
Confidence 689999999998887 99999999998 567999999999999999999986 6678899999999997 56899999
Q ss_pred CCCeEEEeeCCCCceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 79 KDNLLNAWRTPYGASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.|..+.+||+...... .+.+|...|..+.|+ .+++++++.|+++++|+.
T Consensus 295 kDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~ 347 (499)
T KOG0281|consen 295 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWST 347 (499)
T ss_pred CCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEec
Confidence 9999999999876644 567899999999884 569999999999999986
No 47
>KOG0645|consensus
Probab=99.90 E-value=2.9e-21 Score=112.00 Aligned_cols=128 Identities=14% Similarity=0.170 Sum_probs=109.1
Q ss_pred EEeCCC--Cceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC---e-EEeeccccceEEEEEccCCCEEE
Q psy15612 3 LQSVSP--GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD---K-YQLHLHESCVLSLRFAACGKWFV 75 (131)
Q Consensus 3 iwd~~~--~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---~-~~~~~~~~~v~~~~~~~~~~~~~ 75 (131)
||.-.. .+++..+ +|+.+|.+++|+++|.+|++++.|..|-+|.+.... + ..++.|...|..+.|+|....|+
T Consensus 87 Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~ 166 (312)
T KOG0645|consen 87 IWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLF 166 (312)
T ss_pred EeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeE
Confidence 454443 3566667 899999999999999999999999999999997554 2 45688999999999999999999
Q ss_pred EeCCCCeEEEeeCC-CCc--eE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 76 STGKDNLLNAWRTP-YGA--SI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 76 ~~~~~~~i~~w~~~-~~~--~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++.|++|++|.-. ... +. .+.+|...|.+++|++.|..|++++.|++++||...
T Consensus 167 S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~ 225 (312)
T KOG0645|consen 167 SCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLY 225 (312)
T ss_pred EeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeec
Confidence 99999999999766 333 23 667788899999999999999999999999999753
No 48
>KOG0313|consensus
Probab=99.90 E-value=1.8e-22 Score=121.43 Aligned_cols=127 Identities=20% Similarity=0.310 Sum_probs=113.7
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEEccC-CCEEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRFAAC-GKWFV 75 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~~~~-~~~~~ 75 (131)
|+.||+++++....+..+....++..+|..++|++|+.|..+++||.+++. ..++.+|.+.|..+.|+|. ...|+
T Consensus 283 Ik~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~ 362 (423)
T KOG0313|consen 283 IKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLV 362 (423)
T ss_pred EEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEE
Confidence 689999999999988888899999999999999999999999999998765 3678899999999999995 55688
Q ss_pred EeCCCCeEEEeeCCCCc-eE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 76 STGKDNLLNAWRTPYGA-SI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~-~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+++.|+++++||+++.+ ++ -..+|...|.++.|+ ++.++++|+.|.+++++.
T Consensus 363 S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 363 SGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFK 416 (423)
T ss_pred EEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccCcceEEEec
Confidence 99999999999999877 55 667899999999997 456799999999999975
No 49
>KOG0285|consensus
Probab=99.90 E-value=1.2e-22 Score=121.90 Aligned_cols=115 Identities=20% Similarity=0.340 Sum_probs=109.1
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
+|.+.|.++++.|...++++|+.|+++.|||+.++++ ..+.+|...+..+++|+.-.++++++.|+.++.||+...+.+
T Consensus 149 gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvI 228 (460)
T KOG0285|consen 149 GHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVI 228 (460)
T ss_pred hccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhH
Confidence 7999999999999999999999999999999999997 678899999999999999999999999999999999988877
Q ss_pred -EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 95 -FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 95 -~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
...+|-+.|.+++.+|.-..+++++.|..++|||+|
T Consensus 229 R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiR 265 (460)
T KOG0285|consen 229 RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIR 265 (460)
T ss_pred HHhccccceeEEEeccccceeEEecCCcceEEEeeec
Confidence 667899999999999999999999999999999986
No 50
>KOG0316|consensus
Probab=99.90 E-value=4.1e-22 Score=113.84 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=105.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++|+...+.+++++ +|..+|..++.+.|...+++++.|..+.+||..+++. +++.+|.+.|..++|+++...+++++
T Consensus 41 vrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~Sgs 120 (307)
T KOG0316|consen 41 VRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGS 120 (307)
T ss_pred EEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEecc
Confidence 689999999999999 8999999999999999999999999999999999986 78899999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|..+++||.++.... .+......|.++..+ +..+++|+.||+++.||+|
T Consensus 121 fD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR 173 (307)
T KOG0316|consen 121 FDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIR 173 (307)
T ss_pred ccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEee
Confidence 9999999998865432 333344555555542 3445566666666666654
No 51
>KOG0275|consensus
Probab=99.90 E-value=8.7e-24 Score=125.81 Aligned_cols=129 Identities=16% Similarity=0.220 Sum_probs=117.2
Q ss_pred CEEEeCCCCceeeee---------cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEee-ccccceEEEEEcc
Q psy15612 1 MYLQSVSPGRQLQQH---------DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLH-LHESCVLSLRFAA 69 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~-~~~~~v~~~~~~~ 69 (131)
|.+||..+|+..+.+ .+...|.++.|+.|..++++|+.||.+++|.+.++.+ +.+. .|...|.++.|+.
T Consensus 237 iEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSr 316 (508)
T KOG0275|consen 237 IEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSR 316 (508)
T ss_pred eeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEcc
Confidence 468999888776543 3567899999999999999999999999999999997 4454 7999999999999
Q ss_pred CCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 70 CGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 70 ~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
|++.+++++.|.++++-.+.+|+.+ ...+|.+.|....|.++|..+++++.||++++|+.
T Consensus 317 D~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~ 377 (508)
T KOG0275|consen 317 DNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHG 377 (508)
T ss_pred CcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecC
Confidence 9999999999999999999999998 77889999999999999999999999999999985
No 52
>KOG0276|consensus
Probab=99.90 E-value=6.9e-22 Score=125.59 Aligned_cols=130 Identities=15% Similarity=0.225 Sum_probs=117.6
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEcc-CCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAA-CGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~~~~ 76 (131)
||+|+..+++.++.+ .|..-|.+++.+|...++++++.|.+|++|+.+..- .+.+.+|...|.+++|+| |.+.+++
T Consensus 79 IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS 158 (794)
T KOG0276|consen 79 IRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFAS 158 (794)
T ss_pred EEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceee
Confidence 689999999999999 899999999999999999999999999999997654 367899999999999999 6778999
Q ss_pred eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCC--CEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADD--KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~vw~~~ 130 (131)
++-|+++++|.+....+- .+.+|...|.|+.+-+.| .++++|+.|.+++|||.+
T Consensus 159 ~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQ 215 (794)
T KOG0276|consen 159 ASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQ 215 (794)
T ss_pred eeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecc
Confidence 999999999999877766 677899999999997754 589999999999999975
No 53
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.90 E-value=4.8e-21 Score=114.85 Aligned_cols=130 Identities=19% Similarity=0.311 Sum_probs=113.4
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++....+ .|...+.++.|+|++.++++++.++.+.+||+...+. ..+..|...+.++.|+|+++.+++++
T Consensus 117 i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 196 (289)
T cd00200 117 IKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSS 196 (289)
T ss_pred EEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEec
Confidence 578999988877777 5888999999999999988888899999999986664 55667788999999999999999998
Q ss_pred CCCeEEEeeCCCCceEE-ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASIF-QSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.++.+.+||+.+++... ...+...+.+++|+|++.++++++.|+.+++||+.
T Consensus 197 ~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~ 249 (289)
T cd00200 197 SDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLR 249 (289)
T ss_pred CCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcC
Confidence 89999999999888773 44788899999999998888888889999999974
No 54
>KOG0264|consensus
Probab=99.89 E-value=5e-22 Score=121.33 Aligned_cols=130 Identities=8% Similarity=0.165 Sum_probs=106.3
Q ss_pred CEEEeCCCCce-------eeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCC--CCe-EEeeccccceEEEEEc
Q psy15612 1 MYLQSVSPGRQ-------LQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALK--PDK-YQLHLHESCVLSLRFA 68 (131)
Q Consensus 1 i~iwd~~~~~~-------~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~--~~~-~~~~~~~~~v~~~~~~ 68 (131)
|.+||+..... ...+ +|...|..++|+|- ...+++++.|+.+.+||+++ .+. ....+|.+.+.|++|+
T Consensus 202 i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fn 281 (422)
T KOG0264|consen 202 ICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFN 281 (422)
T ss_pred EEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeC
Confidence 57899864322 1223 89999999999995 55678899999999999995 333 4567899999999999
Q ss_pred cC-CCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612 69 AC-GKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 69 ~~-~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~ 130 (131)
|. +..|++++.|+++.+||+++-... ...+|...|.++.|+|. .+.+++++.|+.+.|||+.
T Consensus 282 p~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls 347 (422)
T KOG0264|consen 282 PFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLS 347 (422)
T ss_pred CCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEecc
Confidence 95 567889999999999999976554 67789999999999996 4577888899999999983
No 55
>KOG0302|consensus
Probab=99.89 E-value=7.9e-22 Score=118.78 Aligned_cols=130 Identities=15% Similarity=0.185 Sum_probs=106.8
Q ss_pred CEEEeCCCCceee----eecCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccCCC
Q psy15612 1 MYLQSVSPGRQLQ----QHDFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAACGK 72 (131)
Q Consensus 1 i~iwd~~~~~~~~----~~~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~ 72 (131)
|++|...++.-.. ..+|+..|-.++|||. ...+++|+.|+.|+|||++.+. +.....|.+.|..+.|+.+..
T Consensus 236 I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~ 315 (440)
T KOG0302|consen 236 IHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREP 315 (440)
T ss_pred eEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcc
Confidence 4677766654321 2379999999999996 4578999999999999999874 344588999999999999888
Q ss_pred EEEEeCCCCeEEEeeCCCC---ceE-EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612 73 WFVSTGKDNLLNAWRTPYG---ASI-FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~~~---~~~-~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~ 130 (131)
+|++|+.||.+++||++.- +++ ..+.|..+|+++.|+|. ...+++++.|.+|.+||+.
T Consensus 316 lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 316 LLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred eeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence 9999999999999999853 334 66779999999999996 4467788889999999985
No 56
>KOG0264|consensus
Probab=99.89 E-value=1.4e-21 Score=119.44 Aligned_cols=130 Identities=15% Similarity=0.278 Sum_probs=106.1
Q ss_pred CEEEeCCC--Cceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccC-CCE
Q psy15612 1 MYLQSVSP--GRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAAC-GKW 73 (131)
Q Consensus 1 i~iwd~~~--~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~-~~~ 73 (131)
+.|||+++ .+..... .|.+.+.+++|+|- +..||+|+.|++|.+||++.-. +..+.+|...|.++.|+|+ ...
T Consensus 252 L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etv 331 (422)
T KOG0264|consen 252 LMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETV 331 (422)
T ss_pred EEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCce
Confidence 46999995 4444444 79999999999995 5678899999999999998655 4778999999999999996 557
Q ss_pred EEEeCCCCeEEEeeCCC-Cc-------------eE-EecCCCCCeEEEEECCCCCE-EEEecCCCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWRTPY-GA-------------SI-FQSKESSSVLSCDISADDKY-IVTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~-~~-------------~~-~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~vw~~~ 130 (131)
+++++.|+.+.+||+.. ++ .+ ...+|...|..++|+|+..+ +++.+.|+.+.||+..
T Consensus 332 LASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 332 LASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred eEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 88899999999999752 11 12 34578999999999998775 5788889999999863
No 57
>KOG0281|consensus
Probab=99.89 E-value=1.3e-22 Score=121.63 Aligned_cols=123 Identities=17% Similarity=0.351 Sum_probs=98.9
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe----EEeeccccceEEEEEccCCCEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK----YQLHLHESCVLSLRFAACGKWFV 75 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~ 75 (131)
|++||++++++++++ +|.+.|..+.|+ ..++++++.|.++.+||+....- +.+.+|.+.|..+.|+ .++++
T Consensus 259 vrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIV 334 (499)
T KOG0281|consen 259 VRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIV 334 (499)
T ss_pred EEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEE
Confidence 689999999999988 999999999996 56889999999999999986652 3456788888888885 55888
Q ss_pred EeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 76 STGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+++.|++|++|++.+++.+ .+.+|...|.|+.+ .++++++|+.|.+|++||+
T Consensus 335 sASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi 387 (499)
T KOG0281|consen 335 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDI 387 (499)
T ss_pred EecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEec
Confidence 8888888888888888777 66667777666655 4667777777777777775
No 58
>KOG0647|consensus
Probab=99.89 E-value=2.1e-21 Score=114.02 Aligned_cols=128 Identities=13% Similarity=0.218 Sum_probs=111.2
Q ss_pred CEEEeCCC-Cceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCC--EEE
Q psy15612 1 MYLQSVSP-GRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGK--WFV 75 (131)
Q Consensus 1 i~iwd~~~-~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~ 75 (131)
||+|+++. |..+... .|+++|.+++|+.||..+++|+.|+.+++||+.+++..++..|.++|..+.|-+... +++
T Consensus 52 VR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~ 131 (347)
T KOG0647|consen 52 VRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVSQVAAHDAPVKTCHWVPGMNYQCLV 131 (347)
T ss_pred eEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCeeeeeecccceeEEEEecCCCcceeE
Confidence 68999986 4544332 789999999999999999999999999999999999999999999999999988655 899
Q ss_pred EeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 76 STGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+|++|.+++.||++...++.....++++.++..- ...++.+..++.|.+|+|+
T Consensus 132 TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~--~pm~vVata~r~i~vynL~ 184 (347)
T KOG0647|consen 132 TGSWDKTLKFWDTRSSNPVATLQLPERVYAADVL--YPMAVVATAERHIAVYNLE 184 (347)
T ss_pred ecccccceeecccCCCCeeeeeeccceeeehhcc--CceeEEEecCCcEEEEEcC
Confidence 9999999999999988888777778888888763 4567777788999999984
No 59
>KOG0643|consensus
Probab=99.89 E-value=4.2e-21 Score=111.33 Aligned_cols=130 Identities=19% Similarity=0.294 Sum_probs=114.6
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC-----CCcEEEEeCCCC-------C-eEEeeccccceEEEEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME-----NSNVEVLHALKP-------D-KYQLHLHESCVLSLRF 67 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----~~~v~~~~~~~~-------~-~~~~~~~~~~v~~~~~ 67 (131)
+++||+++|+++..+..+..|..+.|+++|++++.... .+.|.++|++.. + ..++..+.+.+..+.|
T Consensus 76 ~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~W 155 (327)
T KOG0643|consen 76 AKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALW 155 (327)
T ss_pred eEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeee
Confidence 58999999999999999999999999999998776543 457999998732 2 3567778889999999
Q ss_pred ccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 68 AACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|-+.+|++|..++.|..||.++|+.. ....|...|..+.++|+..++++++.|.+.++||.+
T Consensus 156 g~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~ 220 (327)
T KOG0643|consen 156 GPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVR 220 (327)
T ss_pred cccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeecc
Confidence 999999999999999999999999776 445688999999999999999999999999999974
No 60
>KOG0316|consensus
Probab=99.89 E-value=1.5e-21 Score=111.57 Aligned_cols=119 Identities=15% Similarity=0.191 Sum_probs=110.5
Q ss_pred eeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612 12 LQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP 89 (131)
Q Consensus 12 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~ 89 (131)
...+ .+++.|.++.|+-+|++.++++.|.++++|+...+.+ .+..+|..+|.+++.+.|...|++++.|+.+.+||..
T Consensus 10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~ 89 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVN 89 (307)
T ss_pred ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcc
Confidence 3444 7889999999999999999999999999999987775 7788999999999999999999999999999999999
Q ss_pred CCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 90 YGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 90 ~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+|+.. ...+|.+.|..+.|+.+...+++|+-|.++++||.|
T Consensus 90 TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCR 131 (307)
T KOG0316|consen 90 TGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCR 131 (307)
T ss_pred cCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcc
Confidence 99998 778899999999999999999999999999999976
No 61
>KOG0269|consensus
Probab=99.89 E-value=2.8e-22 Score=129.41 Aligned_cols=130 Identities=18% Similarity=0.313 Sum_probs=110.6
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
|++||++..+...++ +..+.|..+.|+|. +..++++...|.+.+||++.... .++.+|.++|.++.|+|++.+|++
T Consensus 158 vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lAT 237 (839)
T KOG0269|consen 158 VKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLAT 237 (839)
T ss_pred EEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeee
Confidence 689999988888777 77788999999995 66889999999999999997764 667899999999999999999999
Q ss_pred eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCE-EEEec--CCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKY-IVTGS--GDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~-l~~~~--~d~~i~vw~~~ 130 (131)
|++|+.+++||+.+++.. .......++.++.|.|..++ |++++ .|..|+|||++
T Consensus 238 GGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvr 296 (839)
T KOG0269|consen 238 GGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVR 296 (839)
T ss_pred cCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeec
Confidence 999999999999865543 44556788999999998665 45544 37789999996
No 62
>KOG0647|consensus
Probab=99.89 E-value=9.7e-22 Score=115.46 Aligned_cols=115 Identities=21% Similarity=0.296 Sum_probs=101.1
Q ss_pred cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCC-Ce--EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612 16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKP-DK--YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG 91 (131)
Q Consensus 16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~-~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 91 (131)
..+..|.+++||| ...+++.++.|++|++|++... .. .....|.+++.+++|+.||..+++++.|+.+++||+.++
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence 4567899999999 5666778999999999999763 32 445678999999999999999999999999999999999
Q ss_pred ceEEecCCCCCeEEEEECCCCC--EEEEecCCCcEEEEEee
Q psy15612 92 ASIFQSKESSSVLSCDISADDK--YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~vw~~~ 130 (131)
+......|.+.|..+.|-+... .|++|+.|.+++.||.|
T Consensus 105 Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R 145 (347)
T KOG0647|consen 105 QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTR 145 (347)
T ss_pred CeeeeeecccceeEEEEecCCCcceeEecccccceeecccC
Confidence 8888888999999999987655 78999999999999986
No 63
>KOG0267|consensus
Probab=99.88 E-value=5.7e-23 Score=131.86 Aligned_cols=130 Identities=19% Similarity=0.345 Sum_probs=119.6
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC-CeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP-DKYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||++.++.+.++ +|...+.++.|+|-+.+.+.|+.|..+.+||.+.. ......+|...+..++|+|+|++++.++
T Consensus 94 iK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ 173 (825)
T KOG0267|consen 94 IKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGG 173 (825)
T ss_pred eeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccC
Confidence 689999999988888 99999999999999999999999999999999844 4566778999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|..+++||...|+.. ....|.+.+..+.|+|..-++++|+.|+++++||+.
T Consensus 174 ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dle 226 (825)
T KOG0267|consen 174 EDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLE 226 (825)
T ss_pred CcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccc
Confidence 9999999999999988 556699999999999999999999999999999985
No 64
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.88 E-value=1.5e-20 Score=127.14 Aligned_cols=128 Identities=23% Similarity=0.299 Sum_probs=110.6
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEEC-CCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYC-PSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++||+++++.+..+.+...+.++.|+ +++..+++|+.|+.|++||++... ...+.+|...|.++.|. ++..++++
T Consensus 600 v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~ 678 (793)
T PLN00181 600 VKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSS 678 (793)
T ss_pred EEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEE
Confidence 689999999988888666789999995 579999999999999999998765 35567899999999997 68899999
Q ss_pred CCCCeEEEeeCCCC------ceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 78 GKDNLLNAWRTPYG------ASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 78 ~~~~~i~~w~~~~~------~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+.|+.+++||+..+ +.+ ...+|...+..++|+|+++++++++.|+.+.+|+.
T Consensus 679 s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~ 737 (793)
T PLN00181 679 STDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHK 737 (793)
T ss_pred ECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEEC
Confidence 99999999999743 233 55678888999999999999999999999999985
No 65
>KOG0310|consensus
Probab=99.88 E-value=8e-21 Score=117.24 Aligned_cols=128 Identities=15% Similarity=0.212 Sum_probs=108.9
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCC-CeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKP-DKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
+++||+.+......+ +|+..|.+.+++|. +.++++|++||+|++||++.. .......|..+|..+.+-|.|..|+++
T Consensus 135 ~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasA 214 (487)
T KOG0310|consen 135 VKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASA 214 (487)
T ss_pred EEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEc
Confidence 478999988864344 89999999999996 557899999999999999876 334445688899999999999999988
Q ss_pred CCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 78 GKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+ .+.+++||+.+|..+ ....|.-.|+|+.+..+++.|++++-|+.+++||+
T Consensus 215 g-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~ 267 (487)
T KOG0310|consen 215 G-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDT 267 (487)
T ss_pred C-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEc
Confidence 7 567999999976655 34449999999999999999999999999999995
No 66
>KOG0318|consensus
Probab=99.88 E-value=1.8e-20 Score=117.01 Aligned_cols=114 Identities=18% Similarity=0.345 Sum_probs=100.7
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEee---ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLH---LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG 91 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 91 (131)
.|..-|.+++|+|||.++++++.|+++.+||-.+++. ..+. +|++.|+.+.|+||++.+++++.|.++++||..+.
T Consensus 188 ~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~ 267 (603)
T KOG0318|consen 188 EHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTN 267 (603)
T ss_pred ccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeecc
Confidence 5777899999999999999999999999999998885 4454 79999999999999999999999999999997755
Q ss_pred ceEE--------------------------------------------ecCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612 92 ASIF--------------------------------------------QSKESSSVLSCDISADDKYIVTGSGDKKATVY 127 (131)
Q Consensus 92 ~~~~--------------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 127 (131)
++.. ..+|...|+++..+|++++|++++.||.|.-|
T Consensus 268 slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W 347 (603)
T KOG0318|consen 268 SLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSW 347 (603)
T ss_pred ceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEE
Confidence 4431 01577889999999999999999999999999
Q ss_pred Ee
Q psy15612 128 EV 129 (131)
Q Consensus 128 ~~ 129 (131)
+.
T Consensus 348 ~~ 349 (603)
T KOG0318|consen 348 DS 349 (603)
T ss_pred ec
Confidence 86
No 67
>KOG0283|consensus
Probab=99.88 E-value=8.3e-22 Score=127.61 Aligned_cols=120 Identities=15% Similarity=0.254 Sum_probs=108.3
Q ss_pred ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEcc-CCCEEEEeCCCCeEEEee
Q psy15612 10 RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAA-CGKWFVSTGKDNLLNAWR 87 (131)
Q Consensus 10 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~ 87 (131)
+++..+ +|.+.|..+.|+. .++|++++.|.+|++|++....+.....|...|+|++|+| |.++|++|+-|+.+++|+
T Consensus 360 kP~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWs 438 (712)
T KOG0283|consen 360 KPFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWS 438 (712)
T ss_pred cchhhhhccchhheeccccc-CCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecccccceEEee
Confidence 344445 8999999999996 5588899999999999999999999999999999999999 789999999999999999
Q ss_pred CCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 88 TPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+...+...-..-..-|++++|.|+|++.+.|+.+|.+++|+..
T Consensus 439 I~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~ 481 (712)
T KOG0283|consen 439 ISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTE 481 (712)
T ss_pred cCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEcc
Confidence 9988888666667999999999999999999999999999863
No 68
>KOG0310|consensus
Probab=99.88 E-value=5.4e-22 Score=122.29 Aligned_cols=130 Identities=24% Similarity=0.301 Sum_probs=110.8
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCC-EEEEe
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGK-WFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~~~~~ 77 (131)
+.||+..+....+++ .....++++.|..||++++.|+..|.|++||..+.. ++.+.+|+.++..+.|+|++. .+++|
T Consensus 50 vqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~ 129 (487)
T KOG0310|consen 50 VQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSG 129 (487)
T ss_pred EEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEec
Confidence 356777766666666 677889999999999999999999999999965543 367889999999999999655 56678
Q ss_pred CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 78 GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
+.|+.+++||+.++... .+.+|.+-|.+.+|+|... .+++|+.||+|++||++
T Consensus 130 sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR 184 (487)
T KOG0310|consen 130 SDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTR 184 (487)
T ss_pred CCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEec
Confidence 88888999999988876 7788999999999999655 77899999999999986
No 69
>KOG1407|consensus
Probab=99.88 E-value=1.3e-20 Score=109.03 Aligned_cols=130 Identities=15% Similarity=0.275 Sum_probs=114.8
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
|++||.+++++.......+.-.-+.|+|+|.+++.++.|..|.+.|.++.+........-.+..+.|+-++.++......
T Consensus 89 ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~Gl 168 (313)
T KOG1407|consen 89 IRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGL 168 (313)
T ss_pred EEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCC
Confidence 68999999999988866666667999999999999999999999999988876555566678889999888888888888
Q ss_pred CeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 81 NLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 81 ~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|.|.|.....-+++ ....|+....|+.|+|+|+++++|+.|-.+.+||+.
T Consensus 169 G~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ 219 (313)
T KOG1407|consen 169 GCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVD 219 (313)
T ss_pred ceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChh
Confidence 99999988877777 778899999999999999999999999999999974
No 70
>KOG0973|consensus
Probab=99.88 E-value=2.6e-21 Score=128.26 Aligned_cols=114 Identities=21% Similarity=0.299 Sum_probs=104.3
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC----------C-C--------eEEeeccccceEEEEEccCCCEEEE
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK----------P-D--------KYQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~----------~-~--------~~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
.|.+.|.++.|+|||++||+|+.|+.+.+|+... + . +..+.+|.+.|.++.|+|++.++++
T Consensus 67 ~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS 146 (942)
T KOG0973|consen 67 DHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVS 146 (942)
T ss_pred cccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEE
Confidence 7899999999999999999999999999998772 0 0 2346789999999999999999999
Q ss_pred eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++-|+.|.+|+..+.+.+ .+.+|.+.|..+.|.|-|+||++-+.|+++++|++
T Consensus 147 ~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt 200 (942)
T KOG0973|consen 147 VSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRT 200 (942)
T ss_pred ecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEc
Confidence 999999999999999777 78899999999999999999999999999999985
No 71
>KOG0292|consensus
Probab=99.87 E-value=4e-21 Score=126.25 Aligned_cols=130 Identities=15% Similarity=0.166 Sum_probs=115.2
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---------------------------
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--------------------------- 52 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--------------------------- 52 (131)
||||+..+.+++..+ +|+.-|++..|+|....+++++-|.+|++||+..-+.
T Consensus 117 IrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~Da 196 (1202)
T KOG0292|consen 117 IRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDA 196 (1202)
T ss_pred EEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCe
Confidence 699999999999998 9999999999999999999999999999999863210
Q ss_pred ---EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce-E--EecCCCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy15612 53 ---YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS-I--FQSKESSSVLSCDISADDKYIVTGSGDKKATV 126 (131)
Q Consensus 53 ---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~-~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 126 (131)
..+.+|...|.-++|+|.-..|++|+.|+.+++|.+...+. . ...+|...|.++-|+|...++++.++|++|+|
T Consensus 197 VVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirV 276 (1202)
T KOG0292|consen 197 VVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRV 276 (1202)
T ss_pred eeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEE
Confidence 12457889999999999999999999999999999875443 2 67789999999999999999999999999999
Q ss_pred EEee
Q psy15612 127 YEVI 130 (131)
Q Consensus 127 w~~~ 130 (131)
||+.
T Consensus 277 wDm~ 280 (1202)
T KOG0292|consen 277 WDMT 280 (1202)
T ss_pred Eecc
Confidence 9974
No 72
>KOG0283|consensus
Probab=99.87 E-value=1.1e-20 Score=122.46 Aligned_cols=130 Identities=12% Similarity=0.147 Sum_probs=110.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
||+|++...+++..+.|+.-|+|++|+| |.+++++|+-|+.++||++...++..-..-...|..++|.|||+..+.|+.
T Consensus 392 VRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~ 471 (712)
T KOG0283|consen 392 VRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTF 471 (712)
T ss_pred EEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEe
Confidence 6999999999999999999999999999 788999999999999999988887554445578999999999999999999
Q ss_pred CCeEEEeeCCCCceE--Ee-------cCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 80 DNLLNAWRTPYGASI--FQ-------SKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~--~~-------~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
+|..++|+...-+.. .. +.....|+.+.|.|... .+++.+.|..|+|+|++
T Consensus 472 ~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~ 532 (712)
T KOG0283|consen 472 NGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGR 532 (712)
T ss_pred ccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEecc
Confidence 999999999876654 11 11234899999997533 56677889999999984
No 73
>KOG0308|consensus
Probab=99.87 E-value=4.7e-21 Score=122.02 Aligned_cols=130 Identities=15% Similarity=0.172 Sum_probs=114.3
Q ss_pred CEEEeCCCC--ceeeee-cCCCCeEEEEE-CCCCCEEEEEeCCCcEEEEeCCCCCe-----------EEee-ccccceEE
Q psy15612 1 MYLQSVSPG--RQLQQH-DFSSQIFSLGY-CPSGEWLAVGMENSNVEVLHALKPDK-----------YQLH-LHESCVLS 64 (131)
Q Consensus 1 i~iwd~~~~--~~~~~~-~~~~~v~~~~~-~~~~~~l~~~~~~~~v~~~~~~~~~~-----------~~~~-~~~~~v~~ 64 (131)
|++|+...+ -++.++ .|...|.++++ .++...+++|+-|+.|.+||+.++.. ..+. ++...+++
T Consensus 97 VK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYS 176 (735)
T KOG0308|consen 97 VKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYS 176 (735)
T ss_pred EEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceee
Confidence 578998866 566666 89999999999 77888999999999999999986621 1122 67889999
Q ss_pred EEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 65 LRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.++.|..+++|+..+.+++||.++.+.. .+.+|...|..+-.+++|+.+++++.|++|++||+.
T Consensus 177 LA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLg 243 (735)
T KOG0308|consen 177 LAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLG 243 (735)
T ss_pred eecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecc
Confidence 999999999999999999999999998877 777999999999999999999999999999999985
No 74
>KOG0293|consensus
Probab=99.87 E-value=4.5e-21 Score=116.91 Aligned_cols=114 Identities=23% Similarity=0.370 Sum_probs=102.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG 91 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 91 (131)
.|..+|..+.||++|++||+++.|.+..+|++.... ..++.+|..+|.-+.||||.+++++++.+..+.+||..+|
T Consensus 222 ~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tg 301 (519)
T KOG0293|consen 222 DHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTG 301 (519)
T ss_pred hCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcc
Confidence 799999999999999999999999999999875332 3567889999999999999999999999999999999999
Q ss_pred ceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 92 ASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 92 ~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
... +..+++-.+.+.+|.|||..+++|+.|+.+..||+
T Consensus 302 d~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdl 341 (519)
T KOG0293|consen 302 DLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDL 341 (519)
T ss_pred hhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecC
Confidence 987 34445688999999999999999999999999986
No 75
>KOG0639|consensus
Probab=99.87 E-value=3.9e-21 Score=119.88 Aligned_cols=131 Identities=61% Similarity=0.908 Sum_probs=119.8
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE--------------------------
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-------------------------- 53 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-------------------------- 53 (131)
|+|||+.++..+..+ +|...+.++.++++|..|.+|+.|.+|+-||++.++..
T Consensus 533 I~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMe 612 (705)
T KOG0639|consen 533 IAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGME 612 (705)
T ss_pred EEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecc
Confidence 689999999999888 99999999999999999999999999999999865310
Q ss_pred ---------------EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe
Q psy15612 54 ---------------QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 54 ---------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 118 (131)
.+..|++.|.+++|++.|+++++.+.|+.+..|.+.-|..++.....+.|.+...+.+.+++++|
T Consensus 613 ns~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~SsVlsCDIS~ddkyIVTG 692 (705)
T KOG0639|consen 613 NSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISFDDKYIVTG 692 (705)
T ss_pred cCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccccCcceeeeeccCceEEEec
Confidence 23357888999999999999999999999999999999999888889999999999999999999
Q ss_pred cCCCcEEEEEeeC
Q psy15612 119 SGDKKATVYEVIY 131 (131)
Q Consensus 119 ~~d~~i~vw~~~~ 131 (131)
+.|.+..||.+.|
T Consensus 693 SGdkkATVYeV~Y 705 (705)
T KOG0639|consen 693 SGDKKATVYEVIY 705 (705)
T ss_pred CCCcceEEEEEeC
Confidence 9999999999987
No 76
>KOG0274|consensus
Probab=99.87 E-value=2.9e-20 Score=119.95 Aligned_cols=125 Identities=18% Similarity=0.219 Sum_probs=111.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
+++||..+|++...+ +|.+.+.++... +..+++|+.|.+|++|++.++.+..+ .+|...|.++..+ +..+++++
T Consensus 273 ~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs 348 (537)
T KOG0274|consen 273 ERVWDCSTGECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGS 348 (537)
T ss_pred EEeEecCCCcEEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEe
Confidence 589999999999999 799999999774 55677889999999999998887554 4599999999997 88999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.|.+||+.+++++ .+.+|...|.++.+.+. ..+++|+.|+.|++||++
T Consensus 349 ~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~ 400 (537)
T KOG0274|consen 349 YDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLR 400 (537)
T ss_pred cCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCC
Confidence 9999999999999999 78889999999988765 889999999999999985
No 77
>KOG1446|consensus
Probab=99.87 E-value=1.3e-19 Score=106.86 Aligned_cols=130 Identities=17% Similarity=0.195 Sum_probs=104.7
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe------------------------
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL------------------------ 55 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~------------------------ 55 (131)
||..++.+.+.++.+ +|...|.+++.+|-+..+++++.|.+|++||++..++.-+
T Consensus 82 IryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~ 161 (311)
T KOG1446|consen 82 IRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGS 161 (311)
T ss_pred eEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCC
Confidence 567788889999888 9999999999999999999999999999999985542100
Q ss_pred ---------------------e-ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecC--C-CCCeEEEEEC
Q psy15612 56 ---------------------H-LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSK--E-SSSVLSCDIS 109 (131)
Q Consensus 56 ---------------------~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~--~-~~~v~~~~~~ 109 (131)
. +...+...+.|||||++++.+...+.+++.|.-+|..+ .... . .......+|+
T Consensus 162 ~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ft 241 (311)
T KOG1446|consen 162 ELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFT 241 (311)
T ss_pred CeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEEC
Confidence 0 12345567999999999999988999999999888876 2211 1 2233678899
Q ss_pred CCCCEEEEecCCCcEEEEEee
Q psy15612 110 ADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 110 ~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+++++++++.||+|.+|++.
T Consensus 242 Pds~Fvl~gs~dg~i~vw~~~ 262 (311)
T KOG1446|consen 242 PDSKFVLSGSDDGTIHVWNLE 262 (311)
T ss_pred CCCcEEEEecCCCcEEEEEcC
Confidence 999999999999999999974
No 78
>KOG0305|consensus
Probab=99.87 E-value=4.8e-21 Score=120.68 Aligned_cols=128 Identities=16% Similarity=0.223 Sum_probs=111.9
Q ss_pred CEEEeCCCCceeeee-c-CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-D-FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
|.|||.++.+.+..+ . |...|.+++|. +..+.+|+.++.+..+|++..+. ..+.+|...|..++|++|++++++
T Consensus 241 v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lAS 318 (484)
T KOG0305|consen 241 VQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLAS 318 (484)
T ss_pred EEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeecc
Confidence 579999988888777 4 89999999997 77889999999999999987763 346789999999999999999999
Q ss_pred eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECC-CCCEEEEec--CCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISA-DDKYIVTGS--GDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~--~d~~i~vw~~~ 130 (131)
++.|+.+.|||....+.+ ....|...|..++|+| ...+||+|+ .|+.|++||..
T Consensus 319 GgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~ 376 (484)
T KOG0305|consen 319 GGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTN 376 (484)
T ss_pred CCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcC
Confidence 999999999999766666 7788999999999999 566788765 48999999974
No 79
>KOG0313|consensus
Probab=99.86 E-value=1.1e-20 Score=113.86 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=101.2
Q ss_pred eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612 11 QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP 89 (131)
Q Consensus 11 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~ 89 (131)
++..+ +|.++|.++.|++ ...+++++.|.+|+.||+.++....-........++..+|..+.+++++.|..+++||.+
T Consensus 252 P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR 330 (423)
T KOG0313|consen 252 PLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPR 330 (423)
T ss_pred ceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCC
Confidence 33445 8999999999998 667889999999999999988864433445678999999999999999999999999999
Q ss_pred CCce--E--EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 90 YGAS--I--FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 90 ~~~~--~--~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
++.- . .+.+|...|..+.|+|... .|++++.|+++++||+|
T Consensus 331 ~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvR 376 (423)
T KOG0313|consen 331 TGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVR 376 (423)
T ss_pred CCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEec
Confidence 7643 2 5678999999999999766 46899999999999997
No 80
>KOG0288|consensus
Probab=99.86 E-value=3.7e-20 Score=112.67 Aligned_cols=128 Identities=13% Similarity=0.172 Sum_probs=110.0
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-eec----cccceEEEEEccCCCEEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-LHL----HESCVLSLRFAACGKWFV 75 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~ 75 (131)
||+||.++..........+.|.++..++++..+.+.+.|.++.+.|+++..+.. +.. .......+.|||++.+++
T Consensus 324 vRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~Yva 403 (459)
T KOG0288|consen 324 VRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVA 403 (459)
T ss_pred eEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceee
Confidence 689999999999888777899999999999999999999999999999988633 221 223477899999999999
Q ss_pred EeCCCCeEEEeeCCCCceE-EecCCC--CCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 76 STGKDNLLNAWRTPYGASI-FQSKES--SSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~-~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+|+.|+.+++|+..++++. .+.... ..|.+++|+|.|..+++++.++.+.+|.
T Consensus 404 AGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 404 AGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred eccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 9999999999999999988 333333 3699999999999999999999999983
No 81
>KOG0306|consensus
Probab=99.86 E-value=1.1e-20 Score=122.07 Aligned_cols=127 Identities=19% Similarity=0.293 Sum_probs=113.9
Q ss_pred EEEeCCCCceeee-ecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 2 YLQSVSPGRQLQQ-HDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 2 ~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
++|-+.+-+--.. ++|.-+|.+|..+||++.+++|+.|.+|++|-+.-+.+ ..+.+|...|.++.|-|+...+.+++.
T Consensus 533 kVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gK 612 (888)
T KOG0306|consen 533 KVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGK 612 (888)
T ss_pred EEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecC
Confidence 4555555554433 49999999999999999999999999999999998888 557899999999999999999999999
Q ss_pred CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
|+.++-||-..-+.. .+.+|...|++++.+|+|.++++++.|..|++|.
T Consensus 613 D~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE 662 (888)
T KOG0306|consen 613 DGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWE 662 (888)
T ss_pred cceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeee
Confidence 999999998877666 7788999999999999999999999999999996
No 82
>KOG0640|consensus
Probab=99.86 E-value=9.7e-21 Score=112.17 Aligned_cols=118 Identities=14% Similarity=0.257 Sum_probs=103.5
Q ss_pred eeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612 12 LQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR 87 (131)
Q Consensus 12 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~ 87 (131)
+.++ .|.++|+.+.|+|....|++++.|++|++||...... .+......++.++.|+|.|.+++.+.....+++||
T Consensus 165 IRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYd 244 (430)
T KOG0640|consen 165 IRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYD 244 (430)
T ss_pred EeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEe
Confidence 3444 8999999999999999999999999999999976543 33445567899999999999999999999999999
Q ss_pred CCCCceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 88 TPYGASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 88 ~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+.+.++. ....|.+.|.++.+++.+++.++++.||.|++||-
T Consensus 245 v~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDG 290 (430)
T KOG0640|consen 245 VNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDG 290 (430)
T ss_pred ccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeecc
Confidence 9998876 23458899999999999999999999999999984
No 83
>KOG0268|consensus
Probab=99.86 E-value=1.9e-21 Score=116.69 Aligned_cols=129 Identities=20% Similarity=0.303 Sum_probs=113.9
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|.+||++++++++.+-....-+.++|+|.+-.+.++++|..+..+|++.-. +.....|.+.|.++.|||.|+-|++|+
T Consensus 212 IvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~Efvsgs 291 (433)
T KOG0268|consen 212 IVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGS 291 (433)
T ss_pred eEEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhcccc
Confidence 578999999999888777888899999976678889999999999997654 355678999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 79 KDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.|.+|+||....+... .....-+.|.++.||.|.+++++||.|+.|++|..
T Consensus 292 yDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka 344 (433)
T KOG0268|consen 292 YDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKA 344 (433)
T ss_pred ccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeec
Confidence 9999999999877665 55666789999999999999999999999999974
No 84
>KOG0305|consensus
Probab=99.86 E-value=2.2e-20 Score=117.77 Aligned_cols=127 Identities=21% Similarity=0.299 Sum_probs=113.5
Q ss_pred CEEEeCCCCceeeeecC-CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeec-cccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDF-SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHL-HESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~-~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++|+..+++....... ...|.++.|+++|..|++|..+|.|.+||....+ ...+.. |...|.+++|+ +..+.+|
T Consensus 199 vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssG 276 (484)
T KOG0305|consen 199 VYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSG 276 (484)
T ss_pred EEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEe
Confidence 68999999987666533 7899999999999999999999999999998766 456666 89999999997 7788999
Q ss_pred CCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 78 GKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++++.|..+|++..+.. ...+|.+.|..+.|+++++++++|+.|+.+.|||.
T Consensus 277 sr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~ 330 (484)
T KOG0305|consen 277 SRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDG 330 (484)
T ss_pred cCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccC
Confidence 99999999999988877 36789999999999999999999999999999996
No 85
>KOG0303|consensus
Probab=99.86 E-value=9.9e-21 Score=114.78 Aligned_cols=115 Identities=21% Similarity=0.357 Sum_probs=102.7
Q ss_pred cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCC--------eEEeeccccceEEEEEccCC-CEEEEeCCCCeEEE
Q psy15612 16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPD--------KYQLHLHESCVLSLRFAACG-KWFVSTGKDNLLNA 85 (131)
Q Consensus 16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~ 85 (131)
+|.++|..++|+| +...|++|+.|.++.+|++..+- ...+.+|...|.-++|+|.. +.+++++.|+.+.+
T Consensus 79 GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~i 158 (472)
T KOG0303|consen 79 GHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSI 158 (472)
T ss_pred CccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEE
Confidence 7999999999999 56788999999999999986432 24578899999999999974 56789999999999
Q ss_pred eeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 86 WRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 86 w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
||+.+|+.+....|+.-|.+++|+.+|.++++++.|++|+|||.+
T Consensus 159 Wnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr 203 (472)
T KOG0303|consen 159 WNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPR 203 (472)
T ss_pred EeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCC
Confidence 999999998666699999999999999999999999999999975
No 86
>KOG0639|consensus
Probab=99.85 E-value=7.6e-21 Score=118.62 Aligned_cols=130 Identities=19% Similarity=0.217 Sum_probs=109.7
Q ss_pred CEEEeCCCC---ceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCC
Q psy15612 1 MYLQSVSPG---RQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~---~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~ 71 (131)
|++||+... ..+..+ ....-+.++.+.|||+.|++|++..++.+||+..... ..+.......+.++.+||.
T Consensus 442 VKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDa 521 (705)
T KOG0639|consen 442 VKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDA 521 (705)
T ss_pred EEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCcc
Confidence 689999753 233333 3445699999999999999999999999999986653 2344444567789999999
Q ss_pred CEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 72 KWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 72 ~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+..+++..||.|.|||+.+...+ .+.+|.+.+.|+..+++|..|-+|+-|.+++-||+|
T Consensus 522 kvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlr 581 (705)
T KOG0639|consen 522 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLR 581 (705)
T ss_pred ceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhh
Confidence 99999999999999999988877 778899999999999999999999999999999986
No 87
>KOG0274|consensus
Probab=99.85 E-value=2.2e-19 Score=115.95 Aligned_cols=126 Identities=20% Similarity=0.298 Sum_probs=111.9
Q ss_pred CEEEeCCCCceeee-e-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQ-H-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~-~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++||..+++.+.. + +|.+.|.++++...+..+++|+.|.++++||..++.+ ..+.+|.+.+.++.. .+..+++|
T Consensus 230 l~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~--~~~~~~sg 307 (537)
T KOG0274|consen 230 LHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTI--DPFLLVSG 307 (537)
T ss_pred eEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEc--cCceEeec
Confidence 46899999988877 6 9999999999988788999999999999999999997 567889999999876 45667788
Q ss_pred CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 78 GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++|.++++|++.+++.+ ...+|.+.|.++..+ +.++++|+.|++|++||++
T Consensus 308 s~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~ 359 (537)
T KOG0274|consen 308 SRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPR 359 (537)
T ss_pred cCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhh
Confidence 99999999999999999 444599999999997 8899999999999999975
No 88
>KOG0302|consensus
Probab=99.85 E-value=1.9e-20 Score=112.97 Aligned_cols=120 Identities=15% Similarity=0.233 Sum_probs=101.2
Q ss_pred eeeee-cCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCe----EEeeccccceEEEEEccC-CCEEEEeCCCCeE
Q psy15612 11 QLQQH-DFSSQIFSLGYCPSG-EWLAVGMENSNVEVLHALKPDK----YQLHLHESCVLSLRFAAC-GKWFVSTGKDNLL 83 (131)
Q Consensus 11 ~~~~~-~~~~~v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i 83 (131)
++.++ +|...-+.++|||-. ..|++|..-+.+++|...++.- ..+.+|...|.+++|||. ...|++++.|+.|
T Consensus 203 Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsI 282 (440)
T KOG0302|consen 203 PLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSI 282 (440)
T ss_pred ceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceE
Confidence 34444 688888999999942 2477888888999999887652 446779999999999995 5578999999999
Q ss_pred EEeeCCCC---ceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 84 NAWRTPYG---ASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 84 ~~w~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+|||++.+ ..+..+.|.+.|.-++|+..-.+|++|+.||+++|||+|
T Consensus 283 rIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR 332 (440)
T KOG0302|consen 283 RIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLR 332 (440)
T ss_pred EEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhh
Confidence 99999988 344678899999999999988899999999999999997
No 89
>KOG0646|consensus
Probab=99.85 E-value=9.8e-20 Score=112.05 Aligned_cols=130 Identities=18% Similarity=0.306 Sum_probs=108.3
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC----------CeEEeeccccceEEEEEcc
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP----------DKYQLHLHESCVLSLRFAA 69 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~----------~~~~~~~~~~~v~~~~~~~ 69 (131)
|++|.+.+|+.+..+ .|-..|.++.|+.||.++++|+.||.|.+|.+..- ....+..|.-+|.++...+
T Consensus 105 lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~ 184 (476)
T KOG0646|consen 105 LYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGS 184 (476)
T ss_pred EEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecC
Confidence 689999999999888 89999999999999999999999999999987421 1355678889999988776
Q ss_pred C--CCEEEEeCCCCeEEEeeCCCCceEE----------------------------------------------------
Q psy15612 70 C--GKWFVSTGKDNLLNAWRTPYGASIF---------------------------------------------------- 95 (131)
Q Consensus 70 ~--~~~~~~~~~~~~i~~w~~~~~~~~~---------------------------------------------------- 95 (131)
. ...+++++.|.++++||+..|..+.
T Consensus 185 Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~ 264 (476)
T KOG0646|consen 185 GGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEE 264 (476)
T ss_pred CCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccc
Confidence 4 3578999999999999976555431
Q ss_pred ------ecCCCC--CeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 96 ------QSKESS--SVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 96 ------~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
..+|.. .|+|++.+-||.+|++|+.||++.|||+.
T Consensus 265 ~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~ 307 (476)
T KOG0646|consen 265 NTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIY 307 (476)
T ss_pred cceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecc
Confidence 013444 89999999999999999999999999973
No 90
>KOG0278|consensus
Probab=99.85 E-value=2e-21 Score=111.95 Aligned_cols=128 Identities=13% Similarity=0.269 Sum_probs=116.1
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
++||.-+|..+..+.|..-|.+++|+.|.+.|++|+.+..+++||+...+ ...+.+|++.|..+.|....+.|++++.
T Consensus 84 kvw~a~tgdelhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSad 163 (334)
T KOG0278|consen 84 KVWDAVTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSAD 163 (334)
T ss_pred hhhhhhhhhhhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeecc
Confidence 58999999999999999999999999999999999999999999998766 4667899999999999998999999999
Q ss_pred CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+.+++||.+++........++.|.++.++++|+++.++ ..+.|+.||..
T Consensus 164 d~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia-~gssV~Fwdak 213 (334)
T KOG0278|consen 164 DKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIA-YGSSVKFWDAK 213 (334)
T ss_pred CCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEe-cCceeEEeccc
Confidence 999999999999999777788999999999999988665 45689999863
No 91
>KOG0772|consensus
Probab=99.85 E-value=8.9e-21 Score=118.32 Aligned_cols=115 Identities=12% Similarity=0.155 Sum_probs=93.6
Q ss_pred cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe-EEee------ccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612 16 DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK-YQLH------LHESCVLSLRFAACGKWFVSTGKDNLLNAWR 87 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~-~~~~------~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~ 87 (131)
+|...+.+-+|+|..+ .+++++.|+++++|++...+. .++. +..-.+..++|++||+.|+.++.||.|.+|+
T Consensus 266 GHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~ 345 (641)
T KOG0772|consen 266 GHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWD 345 (641)
T ss_pred CceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeee
Confidence 5888899999999744 678999999999999976542 2221 2334678999999999999999999999999
Q ss_pred CCCCceE----EecCCCC--CeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 88 TPYGASI----FQSKESS--SVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 88 ~~~~~~~----~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
..+.... ....|.. .|+++.||++|++|++-+.|+++++|||+
T Consensus 346 ~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLr 394 (641)
T KOG0772|consen 346 KGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLR 394 (641)
T ss_pred cCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecc
Confidence 8543221 3445655 89999999999999999999999999997
No 92
>KOG0306|consensus
Probab=99.85 E-value=3.3e-20 Score=119.99 Aligned_cols=130 Identities=16% Similarity=0.230 Sum_probs=115.5
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
|.+||+++++..+.+ .....+.++.-+|+...|+.|..||.|++|+..+... ..+.+|+..|..+.|...|-.+++
T Consensus 45 vn~WdlRtge~~~~l~~~~~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaS 124 (888)
T KOG0306|consen 45 VNIWDLRTGEIEKKLILLKKKAEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLAS 124 (888)
T ss_pred EeEEeeecchhhhhhhhhcccceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEee
Confidence 468999999665544 4446899999999999999999999999999987764 677899999999999999999999
Q ss_pred eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+.|+.|.+||+-...-+ .+.+|...++..-|....+++++.+.|+.+++||+.
T Consensus 125 GskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~ 179 (888)
T KOG0306|consen 125 GSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLE 179 (888)
T ss_pred cCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecc
Confidence 999999999999876666 778899999999999888999999999999999984
No 93
>KOG4283|consensus
Probab=99.84 E-value=6.3e-20 Score=108.07 Aligned_cols=129 Identities=13% Similarity=0.289 Sum_probs=111.0
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCC---CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCE-EE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPS---GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKW-FV 75 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~-~~ 75 (131)
+++||+.+-+....+..++.|++-+++|- ..++++|..+..|++.|+.++.. +.+.+|...|..+.|+|...+ ++
T Consensus 126 lKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLa 205 (397)
T KOG4283|consen 126 LKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLA 205 (397)
T ss_pred EEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEE
Confidence 58999999999988989999999999994 44678889999999999999886 778999999999999998776 57
Q ss_pred EeCCCCeEEEeeCCCCc-eE---------------EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 76 STGKDNLLNAWRTPYGA-SI---------------FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~-~~---------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+++.|+.+++||++... +. ....|.+.+..++|+.++.++++.+.|..+++|+.
T Consensus 206 tgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~ 275 (397)
T KOG4283|consen 206 TGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNM 275 (397)
T ss_pred ecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeec
Confidence 89999999999987431 11 12347788999999999999999999999999985
No 94
>KOG0640|consensus
Probab=99.84 E-value=5.4e-20 Score=109.04 Aligned_cols=129 Identities=20% Similarity=0.407 Sum_probs=109.1
Q ss_pred CEEEeCCCC---ceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE----eeccccceEEEEEccCCCE
Q psy15612 1 MYLQSVSPG---RQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ----LHLHESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~ 73 (131)
|+++|.... +..+.+....+|.++.|+|.|.+|+.|.....+++||+.+.++.. -.+|.+.|.++.+++.|+.
T Consensus 196 vKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~l 275 (430)
T KOG0640|consen 196 VKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSL 275 (430)
T ss_pred EEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccE
Confidence 466776532 223344667889999999999999999999999999999988633 3568899999999999999
Q ss_pred EEEeCCCCeEEEeeCCCCceE--EecCC-CCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 74 FVSTGKDNLLNAWRTPYGASI--FQSKE-SSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~--~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.++++.||.|++||--+++++ ....| ++.|.+..|..+|+++++.+.|..+++|.+
T Consensus 276 YvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi 334 (430)
T KOG0640|consen 276 YVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEI 334 (430)
T ss_pred EEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeee
Confidence 999999999999998888887 44445 467889999999999999999999999987
No 95
>KOG0300|consensus
Probab=99.84 E-value=1.7e-20 Score=111.67 Aligned_cols=129 Identities=19% Similarity=0.294 Sum_probs=114.9
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC------CCCC-----------------------
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHA------LKPD----------------------- 51 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~------~~~~----------------------- 51 (131)
+||.+++++++..+ +|.+.|++++|++.+.++++++.|++-.||.. ....
T Consensus 173 ~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~ 252 (481)
T KOG0300|consen 173 RIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDS 252 (481)
T ss_pred eEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccccccccccc
Confidence 69999999999998 99999999999999999999999999888862 1100
Q ss_pred ------------eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEe
Q psy15612 52 ------------KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 52 ------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~ 118 (131)
+..+.+|.+.|.+..|-..|+.++++++|++-.+||+++|+.+ .+.+|.+....++-+|..+++++.
T Consensus 253 ~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTs 332 (481)
T KOG0300|consen 253 SEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTS 332 (481)
T ss_pred ccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEe
Confidence 0135578888889999999999999999999999999999999 888999999999999999999999
Q ss_pred cCCCcEEEEEee
Q psy15612 119 SGDKKATVYEVI 130 (131)
Q Consensus 119 ~~d~~i~vw~~~ 130 (131)
+.|.+.++||++
T Consensus 333 SrDtTFRLWDFR 344 (481)
T KOG0300|consen 333 SRDTTFRLWDFR 344 (481)
T ss_pred ccCceeEeccch
Confidence 999999999986
No 96
>KOG0267|consensus
Probab=99.84 E-value=5.6e-21 Score=122.90 Aligned_cols=128 Identities=20% Similarity=0.293 Sum_probs=111.8
Q ss_pred EEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612 3 LQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 3 iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
+|.......+..+ +|..+|.++.|+++..+|+.|..+|+|++||++..+. +.+.+|...+..+.|+|-+.+++.++.|
T Consensus 54 L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStd 133 (825)
T KOG0267|consen 54 LWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTD 133 (825)
T ss_pred cccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEecccccc
Confidence 3444444444444 8999999999999999999999999999999998874 7889999999999999999999999999
Q ss_pred CeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 81 NLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 81 ~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
..+.+||.+...+. ...+|...+..+.|+|+|++++.++.|..+++||+.
T Consensus 134 td~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~ 184 (825)
T KOG0267|consen 134 TDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLT 184 (825)
T ss_pred ccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccc
Confidence 99999999955555 666699999999999999999999999999999983
No 97
>KOG0294|consensus
Probab=99.84 E-value=3.3e-19 Score=105.50 Aligned_cols=128 Identities=19% Similarity=0.285 Sum_probs=107.8
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCC--EEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE--WLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~--~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
|+|||++....+..+ .|.+.|+++.|.++-. .|++|+.||.+.+|+.....+ ..+.+|...|..++.+|.++..++
T Consensus 65 I~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALs 144 (362)
T KOG0294|consen 65 IHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALS 144 (362)
T ss_pred EEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEE
Confidence 689999988888776 8999999999998765 899999999999999998875 678899999999999999999999
Q ss_pred eCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 77 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+.|..++.||+-.|+.-+...-......+.|+|.|.+++.+..+ .|-+|.+
T Consensus 145 Vg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~-~i~i~q~ 196 (362)
T KOG0294|consen 145 VGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRN-KIDIYQL 196 (362)
T ss_pred EcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEecc-EEEEEec
Confidence 999999999999888877544444445558888888877776654 4666654
No 98
>KOG0289|consensus
Probab=99.84 E-value=4.4e-19 Score=108.77 Aligned_cols=125 Identities=18% Similarity=0.284 Sum_probs=104.2
Q ss_pred EEeCCCCceeeeecCC---CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 3 LQSVSPGRQLQQHDFS---SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
+.|.+++.++....+. -.+.+.+|+|||..+.+|..|+.+++||+.++. ...+.+|.++|..++|+.+|.++++++
T Consensus 329 Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~a 408 (506)
T KOG0289|consen 329 FSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAA 408 (506)
T ss_pred EEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEe
Confidence 4577788877666442 358999999999999999999999999998776 477899999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612 79 KDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVY 127 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 127 (131)
.|+.+++||++.-+.. +.......+.+++|.+.|++|+.++.|=+|.++
T Consensus 409 dd~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~ 459 (506)
T KOG0289|consen 409 DDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYIC 459 (506)
T ss_pred cCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEE
Confidence 9999999999976655 444455579999999999999998765444443
No 99
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.84 E-value=3.1e-18 Score=98.51 Aligned_cols=112 Identities=16% Similarity=0.265 Sum_probs=86.8
Q ss_pred cCCCCeEEEEECCCCCEEEEE--eCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC---CeEEEeeCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVG--MENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD---NLLNAWRTPY 90 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~w~~~~ 90 (131)
...++|.+++|+|+|..+++. ..+..+.+||++......+. ...+..+.|+|+|++++.++.+ |.+.+||.++
T Consensus 57 ~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~ 134 (194)
T PF08662_consen 57 KKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKGKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK 134 (194)
T ss_pred cCCCceEEEEECcCCCEEEEEEccCCcccEEEcCcccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence 445679999999999987554 45678999999744444443 4566789999999999988654 5699999997
Q ss_pred CceEEecCCCCCeEEEEECCCCCEEEEecC------CCcEEEEEee
Q psy15612 91 GASIFQSKESSSVLSCDISADDKYIVTGSG------DKKATVYEVI 130 (131)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~vw~~~ 130 (131)
.+.+....+.. +..++|+|+|++++++.. |..++||+..
T Consensus 135 ~~~i~~~~~~~-~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 135 KKKISTFEHSD-ATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred CEEeeccccCc-EEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence 77775554444 689999999999987653 6789999863
No 100
>KOG1036|consensus
Probab=99.83 E-value=6.2e-19 Score=103.86 Aligned_cols=127 Identities=13% Similarity=0.226 Sum_probs=109.8
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
+++||....+....+.|..++.+++|.+ ...+++|+.|+.|+.+|+.++....+..|...+.++.+++....++++++|
T Consensus 37 lrlYdv~~~~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~~~~vIsgsWD 115 (323)
T KOG1036|consen 37 LRLYDVPANSLKLKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYEVGCVISGSWD 115 (323)
T ss_pred EEEEeccchhhhhheecCCceeeeeccC-CceEEEeccCceEEEEEecCCcceeeccCCCceEEEEeeccCCeEEEcccC
Confidence 4788888777667779999999999986 667889999999999999999998899999999999999988899999999
Q ss_pred CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 81 NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 81 ~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+.|++||.+..........+..|.++.. .++.|+.|+.|+.+.+||+|
T Consensus 116 ~~ik~wD~R~~~~~~~~d~~kkVy~~~v--~g~~LvVg~~~r~v~iyDLR 163 (323)
T KOG1036|consen 116 KTIKFWDPRNKVVVGTFDQGKKVYCMDV--SGNRLVVGTSDRKVLIYDLR 163 (323)
T ss_pred ccEEEEeccccccccccccCceEEEEec--cCCEEEEeecCceEEEEEcc
Confidence 9999999997544444445568888876 47778888999999999996
No 101
>KOG2110|consensus
Probab=99.83 E-value=1.8e-18 Score=104.07 Aligned_cols=129 Identities=13% Similarity=0.305 Sum_probs=107.9
Q ss_pred CEEEeCCCCceeeee----cCCCCeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCE
Q psy15612 1 MYLQSVSPGRQLQQH----DFSSQIFSLGYCPSGEWLAVGM--ENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~ 73 (131)
|+|||+++.+.+.++ .+...+.++..++.+.+++.-+ ..|.|.+||..+-+. ..+..|++.+-+++|+++|.+
T Consensus 108 IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~l 187 (391)
T KOG2110|consen 108 IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTL 187 (391)
T ss_pred EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCE
Confidence 689999999999887 2344577777777777887642 367899999987764 677899999999999999999
Q ss_pred EEEeCCCCe-EEEeeCCCCceEE--ecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 74 FVSTGKDNL-LNAWRTPYGASIF--QSK-ESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 74 ~~~~~~~~~-i~~w~~~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+++++..|+ |+++.+.+|+.+. ..+ ....|.+++|+|++++|.+.+..++|+++.+
T Consensus 188 lATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL 247 (391)
T KOG2110|consen 188 LATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKL 247 (391)
T ss_pred EEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEe
Confidence 999999887 7899999999883 322 3577899999999999999999999999987
No 102
>KOG1274|consensus
Probab=99.83 E-value=8.4e-19 Score=115.30 Aligned_cols=130 Identities=19% Similarity=0.216 Sum_probs=105.7
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eee-------cc-ccceEEEEEccC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLH-------LH-ESCVLSLRFAAC 70 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~-------~~-~~~v~~~~~~~~ 70 (131)
|++-++.+......+ +|.++|.++.|+|.+.+|++.+.||.|++|++..+.+. .+. .. ...+..++|+|+
T Consensus 120 vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk 199 (933)
T KOG1274|consen 120 VKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPK 199 (933)
T ss_pred EEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCC
Confidence 355666655555555 89999999999999999999999999999999987642 111 11 345667999999
Q ss_pred CCEEEEeCCCCeEEEeeCCCCceEE---ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 71 GKWFVSTGKDNLLNAWRTPYGASIF---QSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 71 ~~~~~~~~~~~~i~~w~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+..++....|+.|++|+..+.+..+ ...+.+.+..+.|+|+|+||++++.||.|.|||+.
T Consensus 200 ~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 200 GGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVD 262 (933)
T ss_pred CCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecc
Confidence 8888888889999999999888772 22345559999999999999999999999999974
No 103
>KOG0641|consensus
Probab=99.83 E-value=2.3e-18 Score=98.55 Aligned_cols=130 Identities=16% Similarity=0.240 Sum_probs=112.5
Q ss_pred CEEEeCCCCceeeeec---CC-----CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCC
Q psy15612 1 MYLQSVSPGRQLQQHD---FS-----SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~---~~-----~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~ 71 (131)
||+||++-..++.+++ |. ..|.+++..|.|++|++|-.|....+||++.++. +.+..|...|.++.|+|..
T Consensus 206 irfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a 285 (350)
T KOG0641|consen 206 IRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGA 285 (350)
T ss_pred EEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCc
Confidence 6899999888887762 22 4589999999999999999999999999998885 7788999999999999999
Q ss_pred CEEEEeCCCCeEEEeeCCCC---ceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 72 KWFVSTGKDNLLNAWRTPYG---ASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 72 ~~~~~~~~~~~i~~w~~~~~---~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.++++++.|..|++=|++.. +.. ....|...+..+.|+|+.-.+++.+.|+++.+|-+.
T Consensus 286 ~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 286 HYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred eEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 99999999999999998731 211 556799999999999999889999999999999753
No 104
>KOG0294|consensus
Probab=99.82 E-value=7.3e-19 Score=104.07 Aligned_cols=112 Identities=18% Similarity=0.267 Sum_probs=101.8
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCC--EEEEeCCCCeEEEeeCCCCc
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGK--WFVSTGKDNLLNAWRTPYGA 92 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~i~~w~~~~~~ 92 (131)
.|.+.+.+++. ++.++++|+.|.+|++||+..... ..+..|.+.+.++.|.++-. .+++++.||.|.+|+...-+
T Consensus 41 aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~ 118 (362)
T KOG0294|consen 41 AHAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWE 118 (362)
T ss_pred ccccceeEEEe--cceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeE
Confidence 68899999998 589999999999999999987764 66778999999999998765 89999999999999998877
Q ss_pred eE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 93 SI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 93 ~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+ .+++|.+.|+.++.+|.+++.++.+.|+.+++||+
T Consensus 119 ~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNL 156 (362)
T KOG0294|consen 119 LLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNL 156 (362)
T ss_pred EeeeecccccccceeEecCCCceEEEEcCCceeeeehh
Confidence 77 78889999999999999999999999999999997
No 105
>KOG1407|consensus
Probab=99.82 E-value=7.1e-19 Score=101.90 Aligned_cols=119 Identities=13% Similarity=0.229 Sum_probs=104.2
Q ss_pred ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612 10 RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR 87 (131)
Q Consensus 10 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~ 87 (131)
+++..+ .|+....+++|+|+|+++++|+.|..+.+||+..-.+ +.+..+.-+|..+.||-||++|++++.|..|-|=+
T Consensus 180 kpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~ 259 (313)
T KOG1407|consen 180 KPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAE 259 (313)
T ss_pred ccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEe
Confidence 444445 6889999999999999999999999999999987765 66778899999999999999999999999999999
Q ss_pred CCCCceEEecCCCCCeEEEEECCCCCEEEEecCC---------CcEEEEE
Q psy15612 88 TPYGASIFQSKESSSVLSCDISADDKYIVTGSGD---------KKATVYE 128 (131)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~vw~ 128 (131)
+++|..+....+.++...++|+|...+|+-++.| |.++++-
T Consensus 260 vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG 309 (313)
T KOG1407|consen 260 VETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFG 309 (313)
T ss_pred cccCCeEEEeeccCCceeEEecCCCceeeEEecCCCCccccccceeEEec
Confidence 9999999888899999999999999998866543 4566664
No 106
>KOG0270|consensus
Probab=99.82 E-value=2.2e-18 Score=105.69 Aligned_cols=130 Identities=12% Similarity=0.159 Sum_probs=109.3
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCC-CEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACG-KWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~-~~~~~ 76 (131)
|++||+.++++..++ .|.+.|.+++|+|. ...|++|+.|++|.+.|.+... ........+.|..++|.|.. ..+++
T Consensus 268 V~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~ 347 (463)
T KOG0270|consen 268 VKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFV 347 (463)
T ss_pred EEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEE
Confidence 689999999999998 58899999999995 6678999999999999998533 23344567889999999964 46778
Q ss_pred eCCCCeEEEeeCCCC-ceE-EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYG-ASI-FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~-~~~-~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~ 130 (131)
+..||.++-+|+++. +++ ....|.+.|.++++++. ..++++++.|+.+++|++.
T Consensus 348 ~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~ 404 (463)
T KOG0270|consen 348 STDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFD 404 (463)
T ss_pred ecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeec
Confidence 889999999999975 566 77889999999999985 4467889999999999973
No 107
>KOG0275|consensus
Probab=99.81 E-value=2e-19 Score=107.48 Aligned_cols=129 Identities=11% Similarity=0.154 Sum_probs=111.3
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++|-+++|+++..+ .|...|.++.|+.|+..+++++.|.++++.-+.++++ ..+.+|.+.|....|.+||..++++
T Consensus 287 IKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisa 366 (508)
T KOG0275|consen 287 IKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISA 366 (508)
T ss_pred EEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEe
Confidence 689999999999988 6999999999999999999999999999999999986 6788999999999999999999999
Q ss_pred CCCCeEEEeeCCCCceE---EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612 78 GKDNLLNAWRTPYGASI---FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~ 129 (131)
+.|+++++|+..+++++ ...+....|.++..-|. ...++.+....++.+-++
T Consensus 367 SsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~ 422 (508)
T KOG0275|consen 367 SSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM 422 (508)
T ss_pred cCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec
Confidence 99999999999999988 22335567777777664 446667767777777665
No 108
>KOG1063|consensus
Probab=99.81 E-value=3.6e-19 Score=114.20 Aligned_cols=117 Identities=21% Similarity=0.364 Sum_probs=102.0
Q ss_pred eeecCCCCeEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612 13 QQHDFSSQIFSLGYCPSGEWLAVGMENS-----NVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAW 86 (131)
Q Consensus 13 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w 86 (131)
+.++|...|++++.+|+++++++++... -|++|+..+... ..+..|.-.|..++|||||+++++.++|++..+|
T Consensus 520 KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~ 599 (764)
T KOG1063|consen 520 KLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLY 599 (764)
T ss_pred HhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEee
Confidence 3458999999999999999999987644 388999887664 5688999999999999999999999999999999
Q ss_pred eCCCCceE-----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 87 RTPYGASI-----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 87 ~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
........ ..+.|...|...+|+|++.+++++|.|.++++|..
T Consensus 600 ~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~ 647 (764)
T KOG1063|consen 600 EVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEE 647 (764)
T ss_pred eeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEec
Confidence 87544332 45679999999999999999999999999999975
No 109
>KOG1446|consensus
Probab=99.81 E-value=1.1e-17 Score=98.83 Aligned_cols=129 Identities=12% Similarity=0.092 Sum_probs=107.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeC--CCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGME--NSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
|++||..+++.++++ .+...+..++|......++.++. |.+|+..++..++ ++.+.+|...|..++.+|-+..+++
T Consensus 38 l~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS 117 (311)
T KOG1446|consen 38 LRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLS 117 (311)
T ss_pred EEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEe
Confidence 589999999999888 55567888888766666655554 7889999998887 4778999999999999999999999
Q ss_pred eCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.|+++++||++..+++......+ ...++|.|+|-++|++.....|++||+|
T Consensus 118 ~S~D~tvrLWDlR~~~cqg~l~~~~-~pi~AfDp~GLifA~~~~~~~IkLyD~R 170 (311)
T KOG1446|consen 118 SSLDKTVRLWDLRVKKCQGLLNLSG-RPIAAFDPEGLIFALANGSELIKLYDLR 170 (311)
T ss_pred cccCCeEEeeEecCCCCceEEecCC-CcceeECCCCcEEEEecCCCeEEEEEec
Confidence 9999999999999888873332222 2358899999999999887799999997
No 110
>KOG0772|consensus
Probab=99.81 E-value=5e-19 Score=110.66 Aligned_cols=129 Identities=19% Similarity=0.259 Sum_probs=97.7
Q ss_pred CEEEeCCCCc-eeeee------cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe----EEeecccc--ceEEEEE
Q psy15612 1 MYLQSVSPGR-QLQQH------DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK----YQLHLHES--CVLSLRF 67 (131)
Q Consensus 1 i~iwd~~~~~-~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~--~v~~~~~ 67 (131)
+||||+...+ .+..+ +..-.+.+++|+|+|+.++.|..||.|.+|+..+... ..-..|.. .|.++.|
T Consensus 293 lRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~F 372 (641)
T KOG0772|consen 293 LRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISF 372 (641)
T ss_pred EEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEe
Confidence 5899997543 23333 2234589999999999999999999999999865432 23356766 8999999
Q ss_pred ccCCCEEEEeCCCCeEEEeeCCCCceE--E--ecCCCCCeEEEEECCCCCEEEEecC------CCcEEEEEe
Q psy15612 68 AACGKWFVSTGKDNLLNAWRTPYGASI--F--QSKESSSVLSCDISADDKYIVTGSG------DKKATVYEV 129 (131)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~--~--~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~vw~~ 129 (131)
|+||++|++-+.|+.+++||++..+.. . -....-.-..++|||+.+++++|.. .+++.++|-
T Consensus 373 S~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~ 444 (641)
T KOG0772|consen 373 SYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDR 444 (641)
T ss_pred ccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEec
Confidence 999999999999999999999976554 1 1223445567899999999998753 356777664
No 111
>KOG0296|consensus
Probab=99.81 E-value=9.6e-18 Score=100.93 Aligned_cols=118 Identities=13% Similarity=0.192 Sum_probs=106.9
Q ss_pred eeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612 12 LQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP 89 (131)
Q Consensus 12 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~ 89 (131)
+..+ .|.+.|.+++.+|+.+++++|+.|..-.+|++.++.. ..+.+|+..|.++.|+.+|.+++++..++.+.+|...
T Consensus 57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~s 136 (399)
T KOG0296|consen 57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVS 136 (399)
T ss_pred eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcc
Confidence 3445 8999999999999999999999999999999998885 6789999999999999999999999999999999999
Q ss_pred CCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 90 YGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 90 ~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++... ........+.=+.|+|.+..++.|+.||.+=+|.+
T Consensus 137 tg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~i 177 (399)
T KOG0296|consen 137 TGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQI 177 (399)
T ss_pred cCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEEC
Confidence 98887 44456677888999999999999999999999986
No 112
>KOG1539|consensus
Probab=99.80 E-value=7.3e-19 Score=114.76 Aligned_cols=128 Identities=16% Similarity=0.306 Sum_probs=113.1
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
+++||..++..+..+.....+..+..+.....++.+..+-.|.++|..+.++ +.+.+|...+.+++|||||+++++++.
T Consensus 517 lkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasm 596 (910)
T KOG1539|consen 517 LKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASM 596 (910)
T ss_pred EEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeec
Confidence 4789999888888887778888888888888888888899999999998885 778899999999999999999999999
Q ss_pred CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC-CcEEEEE
Q psy15612 80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD-KKATVYE 128 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~vw~ 128 (131)
|++|++||+.++..+-.......+.++.|+|+|.+|+++..| .-|.+|-
T Consensus 597 D~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 597 DSTIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVDQNGIYLWS 646 (910)
T ss_pred CCcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEecCceEEEEE
Confidence 999999999999998444466778899999999999999887 5688884
No 113
>KOG0322|consensus
Probab=99.80 E-value=5.6e-19 Score=102.50 Aligned_cols=129 Identities=16% Similarity=0.248 Sum_probs=104.7
Q ss_pred CEEEeCCCCcee----------eee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC--Ce---EEeeccccceEE
Q psy15612 1 MYLQSVSPGRQL----------QQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP--DK---YQLHLHESCVLS 64 (131)
Q Consensus 1 i~iwd~~~~~~~----------~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~--~~---~~~~~~~~~v~~ 64 (131)
+-+||+.++..+ ... .|.++|.++.+.+....=++|+.+..+..|++... .+ ..+.-....+..
T Consensus 177 vv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~g 256 (323)
T KOG0322|consen 177 VVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSG 256 (323)
T ss_pred EEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccc
Confidence 458999886332 222 68899999999876555567777788888988643 22 222333456788
Q ss_pred EEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 65 LRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+...||++.++++++|+.+++|..++.+.+ .++.|.+.|.+++|+|+...++.++.|.+|.+|++
T Consensus 257 vrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 257 VRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred eEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 999999999999999999999999999999 78889999999999999999999999999999986
No 114
>KOG0643|consensus
Probab=99.80 E-value=5e-17 Score=94.68 Aligned_cols=129 Identities=11% Similarity=0.127 Sum_probs=110.5
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC-
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK- 79 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~- 79 (131)
.+|=..+|+.+.++ +|.+.|.++..+-+.+.+++|+.|.++++||.+++++.........|..+.|+++|++++.+..
T Consensus 35 ~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~ 114 (327)
T KOG0643|consen 35 TVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDK 114 (327)
T ss_pred eEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehh
Confidence 35666678999888 9999999999999999999999999999999999998776677889999999999998876643
Q ss_pred ----CCeEEEeeCCCC-------ceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 80 ----DNLLNAWRTPYG-------ASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 80 ----~~~i~~w~~~~~-------~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.+.+.++|++.. ++. ....+.+.+..+-|+|.++++++|..||.|..||++
T Consensus 115 ~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~ 177 (327)
T KOG0643|consen 115 QMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDAR 177 (327)
T ss_pred hcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcc
Confidence 456999998832 222 444567899999999999999999999999999985
No 115
>KOG0308|consensus
Probab=99.80 E-value=6e-18 Score=108.18 Aligned_cols=130 Identities=15% Similarity=0.196 Sum_probs=113.2
Q ss_pred CEEEeCCCCce--ee--------ee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEE
Q psy15612 1 MYLQSVSPGRQ--LQ--------QH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRF 67 (131)
Q Consensus 1 i~iwd~~~~~~--~~--------~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~ 67 (131)
|.+||++++.. +. .+ ++...|++++-++.|..+++|+.++-+++||.++.+ ..++.+|...|..+..
T Consensus 142 IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~ 221 (735)
T KOG0308|consen 142 IFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLV 221 (735)
T ss_pred EEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEE
Confidence 67999997722 21 11 566789999999999999999999999999999877 4778899999999999
Q ss_pred ccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 68 AACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++||..+++++.|++|++||+...+++ ....|...++++..+|+=..+++|+.||.|..=|++
T Consensus 222 ~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~ 285 (735)
T KOG0308|consen 222 NDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLR 285 (735)
T ss_pred cCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccC
Confidence 999999999999999999999988888 666788889999999998999999999998776654
No 116
>KOG0288|consensus
Probab=99.80 E-value=2.1e-18 Score=105.13 Aligned_cols=127 Identities=18% Similarity=0.083 Sum_probs=105.1
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
|++||+..+.+.+.+-....+..+..+ +..++++..|++|++||.++..+.....-.+.|.++..+++|..++++++|
T Consensus 285 iK~WDl~k~~C~kt~l~~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRD 362 (459)
T KOG0288|consen 285 IKLWDLQKAYCSKTVLPGSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRD 362 (459)
T ss_pred hhhhhhhhhheeccccccccccceEec--ceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCC
Confidence 578999998888877566667777765 567788999999999999988875444445589999999999999999999
Q ss_pred CeEEEeeCCCCceEE-e----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 81 NLLNAWRTPYGASIF-Q----SKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 81 ~~i~~w~~~~~~~~~-~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.++.+.|+++.+... . ....+..+.+.|||++.|+++|+.||.|+||++
T Consensus 363 dtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v 416 (459)
T KOG0288|consen 363 DTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSV 416 (459)
T ss_pred CceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEc
Confidence 999999999877651 1 123455889999999999999999999999986
No 117
>KOG2919|consensus
Probab=99.80 E-value=3.7e-18 Score=101.67 Aligned_cols=130 Identities=15% Similarity=0.230 Sum_probs=105.2
Q ss_pred CEEEeCCCCceeeee---cCCCC---eEEEEECCCCCEEEEEeCCCcEEEEeC-CCCC-e--EEe-----eccccceEEE
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQ---IFSLGYCPSGEWLAVGMENSNVEVLHA-LKPD-K--YQL-----HLHESCVLSL 65 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~---v~~~~~~~~~~~l~~~~~~~~v~~~~~-~~~~-~--~~~-----~~~~~~v~~~ 65 (131)
|++||.-+|+....+ .|..+ .-+++|+|||..|+.| .+..|++||+ +.++ + ... .+..+-+.++
T Consensus 135 Ih~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~ 213 (406)
T KOG2919|consen 135 IHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCF 213 (406)
T ss_pred eeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccceeeee
Confidence 689999999988766 45544 4689999999999886 5578999999 4444 2 111 2346778999
Q ss_pred EEccCCC-EEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEeeC
Q psy15612 66 RFAACGK-WFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEVIY 131 (131)
Q Consensus 66 ~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~~~ 131 (131)
+|+|... .++.++....+-++....+.++ .+.+|.+.|+.+.|.++|+.|++|+. |.+|..||+||
T Consensus 214 a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~ 282 (406)
T KOG2919|consen 214 AFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRY 282 (406)
T ss_pred eccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehh
Confidence 9999654 7888998888888888877777 67789999999999999999999886 77899999986
No 118
>KOG1332|consensus
Probab=99.80 E-value=4.6e-18 Score=97.83 Aligned_cols=129 Identities=16% Similarity=0.192 Sum_probs=106.4
Q ss_pred CEEEeCCCC---ceeeee-cCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccC-
Q psy15612 1 MYLQSVSPG---RQLQQH-DFSSQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAAC- 70 (131)
Q Consensus 1 i~iwd~~~~---~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~- 70 (131)
|+|+..+.. +.+..+ +|.++|..++|.. -|.+|++++.|++|.+|.-.+++- .....|.+.|.+++|.|.
T Consensus 35 VkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~waphe 114 (299)
T KOG1332|consen 35 VKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHE 114 (299)
T ss_pred EEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccc
Confidence 578888754 344555 9999999999954 599999999999999999988863 445679999999999996
Q ss_pred -CCEEEEeCCCCeEEEeeCCCC-ceE---EecCCCCCeEEEEECCC---C-----------CEEEEecCCCcEEEEEe
Q psy15612 71 -GKWFVSTGKDNLLNAWRTPYG-ASI---FQSKESSSVLSCDISAD---D-----------KYIVTGSGDKKATVYEV 129 (131)
Q Consensus 71 -~~~~~~~~~~~~i~~w~~~~~-~~~---~~~~~~~~v~~~~~~~~---~-----------~~l~~~~~d~~i~vw~~ 129 (131)
|-.|++++.||.|.+.+.++. ... ....|.-.+.+++|.|. | +.|++|+.|..|+||+.
T Consensus 115 ygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~ 192 (299)
T KOG1332|consen 115 YGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKF 192 (299)
T ss_pred cceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeec
Confidence 557889999999999988754 332 55678999999999986 4 56999999999999985
No 119
>KOG0293|consensus
Probab=99.80 E-value=3.4e-18 Score=104.59 Aligned_cols=126 Identities=18% Similarity=0.203 Sum_probs=103.4
Q ss_pred EEeCCCCce---eeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee--ccccceEEEEEccCCCEEEE
Q psy15612 3 LQSVSPGRQ---LQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH--LHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 3 iwd~~~~~~---~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~ 76 (131)
+|++..... ..++ +|..+|..+.||||.+++++++.+..+.+||+.++...... ++...+.+++|.|||..+++
T Consensus 250 iw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~ 329 (519)
T KOG0293|consen 250 IWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVT 329 (519)
T ss_pred EEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEe
Confidence 566543332 3444 89999999999999999999999999999999999874433 34578899999999999999
Q ss_pred eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 77 TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
|+.|+.+..||+. |... ........|.+++.++||+++++.+.|..+++++.
T Consensus 330 Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~ 383 (519)
T KOG0293|consen 330 GSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNR 383 (519)
T ss_pred cCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEEEecccceeeech
Confidence 9999999999987 4433 22334578999999999999999999999999875
No 120
>KOG1445|consensus
Probab=99.79 E-value=5.7e-19 Score=113.27 Aligned_cols=115 Identities=19% Similarity=0.248 Sum_probs=100.5
Q ss_pred cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCC--------eEEeeccccceEEEEEccC-CCEEEEeCCCCeEEE
Q psy15612 16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPD--------KYQLHLHESCVLSLRFAAC-GKWFVSTGKDNLLNA 85 (131)
Q Consensus 16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~ 85 (131)
-....|..+.|.| |...|+.++.|+.|++|.+..+- ...+..|...|+++.|+|- ...+++++.|.+|++
T Consensus 625 ~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~l 704 (1012)
T KOG1445|consen 625 FNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIEL 704 (1012)
T ss_pred ccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeee
Confidence 3456689999999 78889999999999999986442 1346789999999999995 457889999999999
Q ss_pred eeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 86 WRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 86 w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
||+++++.. .+.+|.+.|..++|||+|+.+++.+.||+++||+.+
T Consensus 705 WDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Pr 750 (1012)
T KOG1445|consen 705 WDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPR 750 (1012)
T ss_pred eehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCC
Confidence 999998887 788999999999999999999999999999999864
No 121
>KOG1273|consensus
Probab=99.79 E-value=6.9e-18 Score=100.30 Aligned_cols=98 Identities=18% Similarity=0.215 Sum_probs=87.8
Q ss_pred eecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612 14 QHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA 92 (131)
Q Consensus 14 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 92 (131)
++.+.. ..++.|++.|.+|++|..+|.+.+||+.+... +.+.+|..+|.+++||+||+.++++++|..+.+||+..|.
T Consensus 20 tld~~~-a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs 98 (405)
T KOG1273|consen 20 TLDNPL-AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGS 98 (405)
T ss_pred eccCCc-cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCC
Confidence 344444 78999999999999999999999999998886 5678899999999999999999999999999999999999
Q ss_pred eEEecCCCCCeEEEEECCCC
Q psy15612 93 SIFQSKESSSVLSCDISADD 112 (131)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~ 112 (131)
++......++|....|+|..
T Consensus 99 ~l~rirf~spv~~~q~hp~k 118 (405)
T KOG1273|consen 99 PLKRIRFDSPVWGAQWHPRK 118 (405)
T ss_pred ceeEEEccCccceeeecccc
Confidence 88777788999999999853
No 122
>KOG1036|consensus
Probab=99.79 E-value=1.5e-17 Score=98.06 Aligned_cols=114 Identities=17% Similarity=0.161 Sum_probs=104.0
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEE
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIF 95 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 95 (131)
.....|.++.|+|.+..|+.++.||.+++|+...........|..++.+++|.+ ...+++++-|+.|+.+|+.++....
T Consensus 11 pP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~ 89 (323)
T KOG1036|consen 11 PPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQ 89 (323)
T ss_pred CChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccC-CceEEEeccCceEEEEEecCCccee
Confidence 346789999999999999999999999999999887766677899999999987 5678899999999999999999988
Q ss_pred ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 96 QSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
...|...+.++..++....+++|+.|++|++||.|
T Consensus 90 igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R 124 (323)
T KOG1036|consen 90 IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPR 124 (323)
T ss_pred eccCCCceEEEEeeccCCeEEEcccCccEEEEecc
Confidence 88999999999999988889999999999999986
No 123
>KOG0300|consensus
Probab=99.78 E-value=3.7e-18 Score=101.85 Aligned_cols=114 Identities=14% Similarity=0.235 Sum_probs=102.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
+|.+.|.+..|-..|+.+++++.|.+..+||+++++. ..+.+|..+...+.-+|..+.++++++|.+.++||.+..-..
T Consensus 270 gH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~s 349 (481)
T KOG0300|consen 270 GHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQS 349 (481)
T ss_pred ccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcce
Confidence 7999999999999999999999999999999999996 667899999999999999999999999999999999843332
Q ss_pred --EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 95 --FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 95 --~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
...+|...|++..|..+.+ +++++.|++|++||++
T Consensus 350 V~VFQGHtdtVTS~vF~~dd~-vVSgSDDrTvKvWdLr 386 (481)
T KOG0300|consen 350 VAVFQGHTDTVTSVVFNTDDR-VVSGSDDRTVKVWDLR 386 (481)
T ss_pred eeeecccccceeEEEEecCCc-eeecCCCceEEEeeec
Confidence 6788999999999987765 7799999999999986
No 124
>KOG4283|consensus
Probab=99.78 E-value=1.3e-17 Score=98.45 Aligned_cols=115 Identities=15% Similarity=0.131 Sum_probs=98.8
Q ss_pred cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccC---CCEEEEeCCCCeEEEeeCCCC
Q psy15612 16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAAC---GKWFVSTGKDNLLNAWRTPYG 91 (131)
Q Consensus 16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~i~~w~~~~~ 91 (131)
.|.-.|.++.|-| |..++.+++.|.++++||..+.+.......++.|++-+|+|- -..++++.++-.+++.|+.+|
T Consensus 99 ~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SG 178 (397)
T KOG4283|consen 99 GHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASG 178 (397)
T ss_pred cceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCC
Confidence 3556799999988 566888899999999999998887655667788999999983 345778888999999999999
Q ss_pred ceE-EecCCCCCeEEEEECCCCCE-EEEecCCCcEEEEEee
Q psy15612 92 ASI-FQSKESSSVLSCDISADDKY-IVTGSGDKKATVYEVI 130 (131)
Q Consensus 92 ~~~-~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~vw~~~ 130 (131)
... .+.+|.+.|.++.|+|...+ |++|+.||.+++||+|
T Consensus 179 s~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiR 219 (397)
T KOG4283|consen 179 SFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIR 219 (397)
T ss_pred cceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEee
Confidence 988 78899999999999998886 5789999999999997
No 125
>KOG0268|consensus
Probab=99.78 E-value=2.2e-18 Score=103.82 Aligned_cols=130 Identities=15% Similarity=0.182 Sum_probs=107.2
Q ss_pred CEEEeCCCCceeeeecC-CCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQHDF-SSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|.|||.+-..++..+.. ...+.++.|+|-.. .|++++.|+.+.+||++.....+-..-......++|+|.+-.|.+++
T Consensus 169 i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ 248 (433)
T KOG0268|consen 169 IDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAAN 248 (433)
T ss_pred eeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceecCccccceeecc
Confidence 46888877777777743 35689999999766 56777799999999999887533333344567899999888899999
Q ss_pred CCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|..++.+|++.-+.. ...+|.+.|..++|||.|+.+++||.|.+|+++.++
T Consensus 249 ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~ 302 (433)
T KOG0268|consen 249 EDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVN 302 (433)
T ss_pred ccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecC
Confidence 9999999999876554 677899999999999999999999999999999864
No 126
>KOG2394|consensus
Probab=99.78 E-value=2.7e-18 Score=107.83 Aligned_cols=92 Identities=16% Similarity=0.272 Sum_probs=82.4
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-E
Q psy15612 18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-F 95 (131)
Q Consensus 18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~ 95 (131)
++.|...+|+|||++|++.+.|+.+++||..+.++ ..+...-+...|++|||||++|++|++|..+.+|.+..++.+ .
T Consensus 290 ~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVAR 369 (636)
T KOG2394|consen 290 EGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVAR 369 (636)
T ss_pred cccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEe
Confidence 45789999999999999999999999999988775 334556678999999999999999999999999999988888 6
Q ss_pred ecCCCCCeEEEEEC
Q psy15612 96 QSKESSSVLSCDIS 109 (131)
Q Consensus 96 ~~~~~~~v~~~~~~ 109 (131)
-.+|.+.|..++|.
T Consensus 370 GqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 370 GQGHKSWVSVVAFD 383 (636)
T ss_pred ccccccceeeEeec
Confidence 67899999999998
No 127
>KOG2096|consensus
Probab=99.77 E-value=1.7e-17 Score=98.86 Aligned_cols=125 Identities=26% Similarity=0.404 Sum_probs=97.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC---CCC------eEEeeccccceEEEEEccC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL---KPD------KYQLHLHESCVLSLRFAAC 70 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~---~~~------~~~~~~~~~~v~~~~~~~~ 70 (131)
|.+||++ |+.+..+ ..+..-...+.+|+|+++++++....|.+|++- .+. ...+.+|.+.|..++|+++
T Consensus 211 i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~ 289 (420)
T KOG2096|consen 211 ICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNS 289 (420)
T ss_pred EEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCC
Confidence 5689999 8888887 455567788899999999999998899999873 222 2457899999999999999
Q ss_pred CCEEEEeCCCCeEEEeeCC-------------CC---------ceE--------------------------------Ee
Q psy15612 71 GKWFVSTGKDNLLNAWRTP-------------YG---------ASI--------------------------------FQ 96 (131)
Q Consensus 71 ~~~~~~~~~~~~i~~w~~~-------------~~---------~~~--------------------------------~~ 96 (131)
...+++.+.||..++||+. .+ +++ ..
T Consensus 290 S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e 369 (420)
T KOG2096|consen 290 STRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELE 369 (420)
T ss_pred cceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHH
Confidence 9999999999999999943 01 000 00
Q ss_pred cCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612 97 SKESSSVLSCDISADDKYIVTGSGDKKATVY 127 (131)
Q Consensus 97 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 127 (131)
..|...|.+++|+++|+++++++ |+.+++.
T Consensus 370 ~~h~~~Is~is~~~~g~~~atcG-dr~vrv~ 399 (420)
T KOG2096|consen 370 DIHSTTISSISYSSDGKYIATCG-DRYVRVI 399 (420)
T ss_pred HhhcCceeeEEecCCCcEEeeec-ceeeeee
Confidence 03567789999999999988865 5666664
No 128
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.77 E-value=2e-16 Score=96.28 Aligned_cols=128 Identities=12% Similarity=0.099 Sum_probs=97.3
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEE-eeccccceEEEEEccCCCEEEEe-
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQ-LHLHESCVLSLRFAACGKWFVST- 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~- 77 (131)
|++||..+++.+..+.....+..+.|+|+++.+ +++..++.+.+||..+++... +..+ ..+..+.|+|+++.++++
T Consensus 13 v~~~d~~t~~~~~~~~~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~ 91 (300)
T TIGR03866 13 ISVIDTATLEVTRTFPVGQRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSG-PDPELFALHPNGKILYIAN 91 (300)
T ss_pred EEEEECCCCceEEEEECCCCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCC-CCccEEEECCCCCEEEEEc
Confidence 578999999888877555557789999999876 566778899999998877533 3333 335678999999977654
Q ss_pred CCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCC-cEEEEEe
Q psy15612 78 GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDK-KATVYEV 129 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~vw~~ 129 (131)
+.++.+.+||+.+++.+........+..++|+|+++++++++.++ .+.+||.
T Consensus 92 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~ 144 (300)
T TIGR03866 92 EDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDT 144 (300)
T ss_pred CCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeC
Confidence 568899999999877664334445578899999999998887764 4566675
No 129
>KOG0646|consensus
Probab=99.77 E-value=2e-17 Score=102.13 Aligned_cols=129 Identities=16% Similarity=0.222 Sum_probs=104.8
Q ss_pred EEEeCCCCceeee-ecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 2 YLQSVSPGRQLQQ-HDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 2 ~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
.+|.+........ .-.++.|.+++-+|.|.+++.|...+.+++|.+.++.+ ..+.+|-..|.++.|+.||.+|++++.
T Consensus 64 ~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgsk 143 (476)
T KOG0646|consen 64 HVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSK 143 (476)
T ss_pred cccccCchhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCC
Confidence 4566654443332 25678899999999999999998999999999999996 456789999999999999999999999
Q ss_pred CCeEEEeeCC---------CCceE-EecCCCCCeEEEEECCC--CCEEEEecCCCcEEEEEee
Q psy15612 80 DNLLNAWRTP---------YGASI-FQSKESSSVLSCDISAD--DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 80 ~~~i~~w~~~---------~~~~~-~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw~~~ 130 (131)
|+.+.+|.+. +.+.. ....|.-.|+.+...+. ..++++++.|+++++||+-
T Consensus 144 Dg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS 206 (476)
T KOG0646|consen 144 DGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLS 206 (476)
T ss_pred CccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEec
Confidence 9999999753 12223 45678888998887764 4578999999999999973
No 130
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.76 E-value=5.3e-16 Score=94.46 Aligned_cols=130 Identities=12% Similarity=0.062 Sum_probs=96.4
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
|++||..+++....+.....+..+.++|+++.++++ ..++.+.+||+.+.+..........+..++|+|+|+.+++++.
T Consensus 55 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~ 134 (300)
T TIGR03866 55 IQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSE 134 (300)
T ss_pred EEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEec
Confidence 578999988887766434446778999999977654 5578999999987664332233345678999999999988877
Q ss_pred CC-eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEee
Q psy15612 80 DN-LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEVI 130 (131)
Q Consensus 80 ~~-~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~~ 130 (131)
++ .+..||..+++..........+..++|+|++++++.+ ..++.+.+||+.
T Consensus 135 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~ 187 (300)
T TIGR03866 135 TTNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVA 187 (300)
T ss_pred CCCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcC
Confidence 64 4677898877765333334456789999999988654 458999999974
No 131
>KOG0299|consensus
Probab=99.76 E-value=1.7e-17 Score=102.29 Aligned_cols=129 Identities=14% Similarity=0.205 Sum_probs=114.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|.|||.++.+.++.+ +|.+.|.+++|-.....+++++.|..+++|++.... +..+.+|+..|..+.-...++.+.+++
T Consensus 226 v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGg 305 (479)
T KOG0299|consen 226 VQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGG 305 (479)
T ss_pred EEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEecc
Confidence 469999999999997 999999999999888899999999999999998665 467889999999998888899999999
Q ss_pred CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+|+++++|.+.....+...++.+.+-|++|-.+ ..+++|+.+|.|.+|++.
T Consensus 306 rDrT~rlwKi~eesqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~ 356 (479)
T KOG0299|consen 306 RDRTVRLWKIPEESQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLL 356 (479)
T ss_pred ccceeEEEeccccceeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeec
Confidence 999999999976666677778889999998754 568899999999999974
No 132
>KOG1063|consensus
Probab=99.76 E-value=3.1e-17 Score=105.54 Aligned_cols=129 Identities=17% Similarity=0.228 Sum_probs=107.3
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-----EEeeccccceEEEEEccCCCEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-----YQLHLHESCVLSLRFAACGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~ 74 (131)
|++|++.+-.....+ .|.-.|..++|||||++|++.+.|.++.+|....... .....|..-|.++.|+|++.+|
T Consensus 554 I~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~F 633 (764)
T KOG1063|consen 554 IRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYF 633 (764)
T ss_pred EEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCccccee
Confidence 689998876666655 8999999999999999999999999999999854432 2356799999999999999999
Q ss_pred EEeCCCCeEEEeeCCCC--ceE---EecCCCCCeEEEEECCC-----CCEEEEecCCCcEEEEEe
Q psy15612 75 VSTGKDNLLNAWRTPYG--ASI---FQSKESSSVLSCDISAD-----DKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~--~~~---~~~~~~~~v~~~~~~~~-----~~~l~~~~~d~~i~vw~~ 129 (131)
+++|+|.++.+|...+. +.+ ....+...|+.+++.|- +..++.|-+.|.|.+|..
T Consensus 634 aTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~ 698 (764)
T KOG1063|consen 634 ATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRR 698 (764)
T ss_pred EEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEec
Confidence 99999999999998877 333 34567899999998762 236678888999999973
No 133
>KOG2111|consensus
Probab=99.76 E-value=2.7e-16 Score=93.38 Aligned_cols=95 Identities=9% Similarity=0.260 Sum_probs=82.8
Q ss_pred EeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCCEEEEeCCCCe-EEEeeCCCCceEE---ecCCCCCeEEEEE
Q psy15612 36 GMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGKWFVSTGKDNL-LNAWRTPYGASIF---QSKESSSVLSCDI 108 (131)
Q Consensus 36 ~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-i~~w~~~~~~~~~---~~~~~~~v~~~~~ 108 (131)
|..-|.|.+-|+...+. ..+.+|.+.|.|++.+.+|..++++|..|+ |++||..+|..+. .......+.+++|
T Consensus 155 g~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaF 234 (346)
T KOG2111|consen 155 GFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAF 234 (346)
T ss_pred CCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEe
Confidence 44568899999986665 667899999999999999999999999887 8999999999882 2235688999999
Q ss_pred CCCCCEEEEecCCCcEEEEEee
Q psy15612 109 SADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 109 ~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
||++.+++.+|..|+++|+.++
T Consensus 235 Sp~~s~LavsSdKgTlHiF~l~ 256 (346)
T KOG2111|consen 235 SPNSSWLAVSSDKGTLHIFSLR 256 (346)
T ss_pred CCCccEEEEEcCCCeEEEEEee
Confidence 9999999999999999999875
No 134
>KOG1034|consensus
Probab=99.76 E-value=2.5e-17 Score=98.20 Aligned_cols=115 Identities=17% Similarity=0.258 Sum_probs=100.0
Q ss_pred cCCCCeEEEEECCC----CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCC-CEEEEeCCCCeEEEeeCC
Q psy15612 16 DFSSQIFSLGYCPS----GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACG-KWFVSTGKDNLLNAWRTP 89 (131)
Q Consensus 16 ~~~~~v~~~~~~~~----~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~ 89 (131)
++.+..+.++|+-+ ..+++.++.-|.|++.|..+.++ ..+.+|...|..+++.|+. +++++++.|..+++|+++
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~ 166 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ 166 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence 36677788888643 45788888999999999998886 5678999999999999964 578899999999999999
Q ss_pred CCceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 90 YGASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 90 ~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+..++ -..+|.+.|.++.|+++|.++++++.|.++++|++.
T Consensus 167 ~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 167 TDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLN 211 (385)
T ss_pred CCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecC
Confidence 99988 234699999999999999999999999999999974
No 135
>KOG0299|consensus
Probab=99.76 E-value=3e-17 Score=101.25 Aligned_cols=115 Identities=15% Similarity=0.238 Sum_probs=102.6
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-----------------Ee--eccccceEEEEEccCCCEEEE
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-----------------QL--HLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-----------------~~--~~~~~~v~~~~~~~~~~~~~~ 76 (131)
.|.-.+.+++++|+.++.++++.+++|.-|+..++... +. ..|...+.+++.++||+++++
T Consensus 140 ~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylat 219 (479)
T KOG0299|consen 140 KHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLAT 219 (479)
T ss_pred cccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEe
Confidence 78889999999999999999999999999998766511 01 256778999999999999999
Q ss_pred eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.|+.+.||+.++.+.+ ...+|.+.|.+++|-.....+++++.|+.+++|++.
T Consensus 220 gg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~ 274 (479)
T KOG0299|consen 220 GGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSID 274 (479)
T ss_pred cCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehh
Confidence 999999999999999998 668899999999999888889999999999999974
No 136
>KOG2106|consensus
Probab=99.75 E-value=2.8e-16 Score=98.42 Aligned_cols=125 Identities=19% Similarity=0.269 Sum_probs=106.0
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
+++|+ ..+.+.......++.++.|+|.| .++.|...|...+.|.++....++....+++.+++|+|+|.+++.++.|
T Consensus 392 v~lW~--~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d 468 (626)
T KOG2106|consen 392 VRLWN--DHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHD 468 (626)
T ss_pred EEEcc--CCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCC
Confidence 47888 56666666677889999999999 9999999999999999997766665568899999999999999999999
Q ss_pred CeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 81 NLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 81 ~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+.|++|.+...... ..+-+.+.+..+.|++|++++.+-+.|..|..|.
T Consensus 469 ~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~ 519 (626)
T KOG2106|consen 469 NHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWK 519 (626)
T ss_pred CeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEc
Confidence 99999988754443 2333569999999999999999999999999994
No 137
>KOG2096|consensus
Probab=99.75 E-value=1e-16 Score=95.63 Aligned_cols=114 Identities=14% Similarity=0.184 Sum_probs=96.5
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC---CCce
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP---YGAS 93 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~---~~~~ 93 (131)
|...+..+-....+.+|++++.|..|.+|++++..+..+......-+..+.||+|+++++++....+++|.+- +|..
T Consensus 186 h~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~f 265 (420)
T KOG2096|consen 186 HQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTF 265 (420)
T ss_pred cccceEEEeecCCceEEEEecCCCcEEEEecCCceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcch
Confidence 4455666777777889999999999999999966667777777777889999999999999999999999853 3432
Q ss_pred E------EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 94 I------FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 94 ~------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
. .+.+|.+.|...+|+++++.+++.+.||+.++||..
T Consensus 266 qev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 266 QEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred hhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 2 567899999999999999999999999999999863
No 138
>KOG1188|consensus
Probab=99.75 E-value=8.1e-17 Score=96.35 Aligned_cols=130 Identities=9% Similarity=0.152 Sum_probs=103.4
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCe---EEeeccc-cceEEEEEccCCCE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPDK---YQLHLHE-SCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~-~~v~~~~~~~~~~~ 73 (131)
|++||..+++.+..+ .++..++.++|.. .+..+.+++.||.|++||++.... ....+++ .+..+++.+-.++.
T Consensus 52 v~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~i 131 (376)
T KOG1188|consen 52 VRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNI 131 (376)
T ss_pred EEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCe
Confidence 689999999988888 7888888899966 466788999999999999987653 2334444 35566766656777
Q ss_pred EEEeCC----CCeEEEeeCCCCce-E--EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612 74 FVSTGK----DNLLNAWRTPYGAS-I--FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~----~~~i~~w~~~~~~~-~--~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~ 130 (131)
++++.. +-.+.+||++..+. + ....|...|+++.|+|. .++|++|+.||.+.++|+.
T Consensus 132 i~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~ 196 (376)
T KOG1188|consen 132 IACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTK 196 (376)
T ss_pred EEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecC
Confidence 877643 45699999998776 3 55679999999999995 6789999999999999974
No 139
>KOG0641|consensus
Probab=99.74 E-value=6.1e-16 Score=88.73 Aligned_cols=128 Identities=17% Similarity=0.220 Sum_probs=106.8
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeec-------cccceEEEEEccCCC
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHL-------HESCVLSLRFAACGK 72 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~-------~~~~v~~~~~~~~~~ 72 (131)
++-|-..|+....+ +|.+.|.++. +=++.++++|+.|.+|++||++-..+ ..+.. ..+.|..++..|.|+
T Consensus 166 y~tdc~~g~~~~a~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgr 244 (350)
T KOG0641|consen 166 YITDCGRGQGFHALSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGR 244 (350)
T ss_pred EEeecCCCCcceeecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcc
Confidence 44466677777777 8888887763 33688999999999999999987664 22211 235788999999999
Q ss_pred EEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 73 WFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.++++..|....+||++.++.+ ...+|...|.++.|+|...++++++.|.+|++=|++
T Consensus 245 ll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlq 303 (350)
T KOG0641|consen 245 LLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ 303 (350)
T ss_pred eeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecc
Confidence 9999999999999999988887 677899999999999999999999999999998875
No 140
>KOG0973|consensus
Probab=99.74 E-value=1.7e-16 Score=105.90 Aligned_cols=80 Identities=23% Similarity=0.373 Sum_probs=72.8
Q ss_pred ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612 10 RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR 87 (131)
Q Consensus 10 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~ 87 (131)
++...+ +|...|..++|+|++.++++++.|++|.+|+..+.+. ..+.+|.+.|-.+.|.|-|++|++-+.|+++++|+
T Consensus 120 k~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwr 199 (942)
T KOG0973|consen 120 KVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWR 199 (942)
T ss_pred eEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEE
Confidence 344555 8999999999999999999999999999999998875 66789999999999999999999999999999998
Q ss_pred CC
Q psy15612 88 TP 89 (131)
Q Consensus 88 ~~ 89 (131)
+.
T Consensus 200 t~ 201 (942)
T KOG0973|consen 200 TS 201 (942)
T ss_pred cc
Confidence 44
No 141
>KOG1009|consensus
Probab=99.74 E-value=3.1e-17 Score=99.89 Aligned_cols=114 Identities=18% Similarity=0.297 Sum_probs=99.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC--------C-----CC---e-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL--------K-----PD---K-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~--------~-----~~---~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
.|...|+.+.|+|+|..|++|+.++.+.+|... + .+ . ..+.+|...++.++|+|++.++++++
T Consensus 63 ~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s 142 (434)
T KOG1009|consen 63 RHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGS 142 (434)
T ss_pred CCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeee
Confidence 788999999999999999999999999999776 2 11 1 33467889999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
-|+.+++||+..|... ....|..-+..++|.|.++++++-+.|+..++.++
T Consensus 143 ~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~ 194 (434)
T KOG1009|consen 143 VDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSA 194 (434)
T ss_pred ccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeee
Confidence 9999999999999998 67789999999999999999999888886655544
No 142
>KOG1007|consensus
Probab=99.74 E-value=1.7e-16 Score=93.50 Aligned_cols=128 Identities=16% Similarity=0.181 Sum_probs=102.1
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEcc-CCCEE
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAA-CGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~~ 74 (131)
++.||+++.++...+ .|...|..+.|+|+.+ .|++++.|+.|++||.+..+ +..+..|...+.+++|+| ..+.+
T Consensus 195 l~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLi 274 (370)
T KOG1007|consen 195 LQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLI 274 (370)
T ss_pred EEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEE
Confidence 468999988877766 7888999999999866 56889999999999998766 467888999999999999 47788
Q ss_pred EEeCCCCeEEEeeCCCCc------------------------------eEEecCCCCCeEEEEECCCCCE-EEEecCCCc
Q psy15612 75 VSTGKDNLLNAWRTPYGA------------------------------SIFQSKESSSVLSCDISADDKY-IVTGSGDKK 123 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~------------------------------~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~ 123 (131)
++++.|..+.+|....-. ......|...|++++|+....+ +++.+.||.
T Consensus 275 Ls~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGR 354 (370)
T KOG1007|consen 275 LSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGR 354 (370)
T ss_pred EecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCce
Confidence 899999999998743211 0012247889999999976665 578899998
Q ss_pred EEEEE
Q psy15612 124 ATVYE 128 (131)
Q Consensus 124 i~vw~ 128 (131)
+.|=.
T Consensus 355 viIs~ 359 (370)
T KOG1007|consen 355 VIISS 359 (370)
T ss_pred EEeec
Confidence 87643
No 143
>KOG1332|consensus
Probab=99.74 E-value=2.7e-17 Score=94.70 Aligned_cols=129 Identities=22% Similarity=0.258 Sum_probs=104.8
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCC-C---eEEeeccccceEEEEEccC-
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKP-D---KYQLHLHESCVLSLRFAAC- 70 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~-~---~~~~~~~~~~v~~~~~~~~- 70 (131)
|.||.-++++-.+.. .|...|++++|.|. |-.|++++.||.|.+.+.... . ......|...+.++.|.|-
T Consensus 82 VIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~ 161 (299)
T KOG1332|consen 82 VIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPAS 161 (299)
T ss_pred EEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcC
Confidence 457776766443333 68899999999986 668899999999999988755 2 1335778999999999985
Q ss_pred --C-----------CEEEEeCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECCCC----CEEEEecCCCcEEEEEe
Q psy15612 71 --G-----------KWFVSTGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISADD----KYIVTGSGDKKATVYEV 129 (131)
Q Consensus 71 --~-----------~~~~~~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~vw~~ 129 (131)
| +.|++++.|+.+++|...+++.. .+.+|.+.|+.++|.|.- .++++++.||++.||..
T Consensus 162 ~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~ 240 (299)
T KOG1332|consen 162 APGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTK 240 (299)
T ss_pred CCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEe
Confidence 4 56999999999999999887654 577899999999999963 46899999999999964
No 144
>KOG2055|consensus
Probab=99.74 E-value=2.8e-16 Score=97.27 Aligned_cols=131 Identities=11% Similarity=0.184 Sum_probs=103.2
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceE--EEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVL--SLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~~~ 78 (131)
|.+....+++.+..+..++.|..+.|+.+++.|+..+.+|.|.+||++...+.......+.+. .++.+++|+++++|+
T Consensus 327 I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS 406 (514)
T KOG2055|consen 327 IHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGS 406 (514)
T ss_pred EEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEecc
Confidence 345566778888888889999999999999999999999999999999988755444444444 566678999999999
Q ss_pred CCCeEEEeeCCC------CceEEe------------------------------------------------cCCCCCeE
Q psy15612 79 KDNLLNAWRTPY------GASIFQ------------------------------------------------SKESSSVL 104 (131)
Q Consensus 79 ~~~~i~~w~~~~------~~~~~~------------------------------------------------~~~~~~v~ 104 (131)
..|.+.|||..+ .+++.. ...-+.++
T Consensus 407 ~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vt 486 (514)
T KOG2055|consen 407 DSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVT 486 (514)
T ss_pred CcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceE
Confidence 999999999431 111100 01236689
Q ss_pred EEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612 105 SCDISADDKYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 105 ~~~~~~~~~~l~~~~~d~~i~vw~~~~ 131 (131)
|++|+|.+.+++.|..+|++.+|.+.+
T Consensus 487 c~aFSP~sG~lAvGNe~grv~l~kL~h 513 (514)
T KOG2055|consen 487 CMAFSPNSGYLAVGNEAGRVHLFKLHH 513 (514)
T ss_pred EEEecCCCceEEeecCCCceeeEeecc
Confidence 999999999999999999999999863
No 145
>KOG1272|consensus
Probab=99.74 E-value=1.3e-17 Score=103.21 Aligned_cols=129 Identities=11% Similarity=0.135 Sum_probs=113.2
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
+++|| ..|..+..+....+|..+.|-|---+|++++..|.+.--|+.++++ ..+....+.+..+.-+|-...+-.|..
T Consensus 193 ~yvYD-~~GtElHClk~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~Ghs 271 (545)
T KOG1272|consen 193 VYVYD-NNGTELHCLKRHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHS 271 (545)
T ss_pred EEEec-CCCcEEeehhhcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCC
Confidence 46777 4577888887778899999999888899999999999999998885 445556677888888998888999999
Q ss_pred CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|++.+|.....+.+ ....|.+.|.++++.++|+|+++++.|+.++|||+|
T Consensus 272 nGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR 323 (545)
T KOG1272|consen 272 NGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLR 323 (545)
T ss_pred CceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeec
Confidence 999999999888887 777899999999999999999999999999999997
No 146
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.73 E-value=7.7e-16 Score=98.32 Aligned_cols=130 Identities=17% Similarity=0.115 Sum_probs=93.7
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++||...........+...+..+.|+|||+.|+..+.+ ..|.+||+.+++...+.........++|+|||+.++.+
T Consensus 186 i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~ 265 (429)
T PRK01742 186 VRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFA 265 (429)
T ss_pred EEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECCCCCEEEEE
Confidence 467787644433333677789999999999999887643 46999999887654444333444578999999988775
Q ss_pred -CCCCeEE--EeeCCCCceEEecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEee
Q psy15612 78 -GKDNLLN--AWRTPYGASIFQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEVI 130 (131)
Q Consensus 78 -~~~~~i~--~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~ 130 (131)
+.++.+. +||+.+++...+..+...+....|+|+|+.++.++ .++...+|++.
T Consensus 266 ~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~ 322 (429)
T PRK01742 266 SSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMS 322 (429)
T ss_pred EecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEE
Confidence 4566554 45776666655555666788999999999876554 57788888763
No 147
>KOG1273|consensus
Probab=99.73 E-value=4.8e-16 Score=92.60 Aligned_cols=130 Identities=15% Similarity=0.228 Sum_probs=102.2
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Ee--e-------ccc----------
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QL--H-------LHE---------- 59 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~--~-------~~~---------- 59 (131)
|-|||+.|...-+.+ .|..+|.+++||++|++|++++.|..+.+||+..+.+. ++ . -|+
T Consensus 47 vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~ 126 (405)
T KOG1273|consen 47 VVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATI 126 (405)
T ss_pred EEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEE
Confidence 468999988766666 89999999999999999999999999999999876531 10 0 000
Q ss_pred ---------------------------cceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECC
Q psy15612 60 ---------------------------SCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISA 110 (131)
Q Consensus 60 ---------------------------~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~ 110 (131)
....+..|.+.|+++++|...|.+.+++..+-+++ +.......|.++.++.
T Consensus 127 ~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~ 206 (405)
T KOG1273|consen 127 MEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSR 206 (405)
T ss_pred ecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEec
Confidence 00011236677899999999999999999988887 2323347899999999
Q ss_pred CCCEEEEecCCCcEEEEEee
Q psy15612 111 DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 111 ~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.++.-+.|+.|+.|++.
T Consensus 207 ~g~~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 207 KGRFLIINTSDRVIRTYEIS 226 (405)
T ss_pred cCcEEEEecCCceEEEEehh
Confidence 99999999999999999874
No 148
>KOG0301|consensus
Probab=99.73 E-value=5.2e-16 Score=100.04 Aligned_cols=123 Identities=20% Similarity=0.300 Sum_probs=102.6
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
|++|.- ++.++++ +|...|..+++-|++. +++++.||.|++|++.+..+....+|.+.++++...+++..+++++.
T Consensus 163 IklWk~--~~~l~tf~gHtD~VRgL~vl~~~~-flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gE 239 (745)
T KOG0301|consen 163 IKLWKG--GTLLKTFSGHTDCVRGLAVLDDSH-FLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSISMALSDGLIVSTGE 239 (745)
T ss_pred eeeccC--CchhhhhccchhheeeeEEecCCC-eEeecCCceEEEEeccCceeeeeeccceEEEEEEecCCCCeEEEecC
Confidence 567764 6677777 8999999999987664 56888999999999977777889999999999998889999999999
Q ss_pred CCeEEEeeCCCCceEEecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 80 DNLLNAWRTPYGASIFQSK-ESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
|+++++|+.. ++..... +...++++.+-++|. +++|+.||.|+||..
T Consensus 240 DrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~ 287 (745)
T KOG0301|consen 240 DRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTV 287 (745)
T ss_pred CceEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEe
Confidence 9999999976 5543333 445899999988888 567788999999965
No 149
>KOG0303|consensus
Probab=99.73 E-value=2.1e-16 Score=96.36 Aligned_cols=129 Identities=12% Similarity=0.167 Sum_probs=102.7
Q ss_pred CEEEeCCCC-------ceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCC
Q psy15612 1 MYLQSVSPG-------RQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~-------~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 71 (131)
|.+|++..+ +.+..+ +|..+|..++|+|. .+.|++++.|..|.+|++.+++......|...|.++.|+-||
T Consensus 106 v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dG 185 (472)
T KOG0303|consen 106 VMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLDHPDMVYSMSFNRDG 185 (472)
T ss_pred EEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecCCCCeEEEEEeccCC
Confidence 568887543 334444 89999999999996 557889999999999999999853333499999999999999
Q ss_pred CEEEEeCCCCeEEEeeCCCCceEE-ecCC-CCCeEEEEECCCCCEEEEec---CCCcEEEEEe
Q psy15612 72 KWFVSTGKDNLLNAWRTPYGASIF-QSKE-SSSVLSCDISADDKYIVTGS---GDKKATVYEV 129 (131)
Q Consensus 72 ~~~~~~~~~~~i~~w~~~~~~~~~-~~~~-~~~v~~~~~~~~~~~l~~~~---~d~~i~vw~~ 129 (131)
+++++.+.|..|++||.++++.+. ...| +.....+-|-.++..+.+|- .++++-+||.
T Consensus 186 s~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp 248 (472)
T KOG0303|consen 186 SLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDP 248 (472)
T ss_pred ceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccccccccceeccCc
Confidence 999999999999999999999883 3344 34556677888888555553 3678999975
No 150
>KOG2048|consensus
Probab=99.73 E-value=1.8e-15 Score=97.23 Aligned_cols=129 Identities=16% Similarity=0.136 Sum_probs=106.7
Q ss_pred CEEEeCCCCceeee-e--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQ-H--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~-~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
|.||+++.+-.... + +....|.+++|++ +..|.+.+.+|.|.-||+.+.+. ..+....+.+.+++.+|.+..++.
T Consensus 49 IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~I 127 (691)
T KOG2048|consen 49 IEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAI 127 (691)
T ss_pred EEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEe
Confidence 56899887644433 2 4556799999995 55667777899999999988875 566777889999999999999999
Q ss_pred eCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.||.+..++...++.. .+....+++.+++|+|++..+++|+.||.|++||+.
T Consensus 128 gcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~ 184 (691)
T KOG2048|consen 128 GCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVK 184 (691)
T ss_pred ecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcC
Confidence 999998888888877766 344567999999999999999999999999999974
No 151
>KOG0290|consensus
Probab=99.72 E-value=1.6e-16 Score=93.60 Aligned_cols=129 Identities=11% Similarity=0.141 Sum_probs=100.5
Q ss_pred EEEeCCCCce---eee-ecCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCeEEe----eccccceEEEEEccC-C
Q psy15612 2 YLQSVSPGRQ---LQQ-HDFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDKYQL----HLHESCVLSLRFAAC-G 71 (131)
Q Consensus 2 ~iwd~~~~~~---~~~-~~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~----~~~~~~v~~~~~~~~-~ 71 (131)
-|||++++.. ... +.|..+|..++|...+. .+++.+.||.+++||++..+-.++ .....+...++|++. .
T Consensus 176 TiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDp 255 (364)
T KOG0290|consen 176 TIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDP 255 (364)
T ss_pred EEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCc
Confidence 4899998743 233 39999999999998655 678899999999999987764322 222456778999884 5
Q ss_pred CEEEEeCCC-CeEEEeeCCCCceE--EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612 72 KWFVSTGKD-NLLNAWRTPYGASI--FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 72 ~~~~~~~~~-~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~ 130 (131)
+++++-..| ..+.+.|++..... .+..|.+.|..++|.|.. ..+.+++.|.++.+||+.
T Consensus 256 nymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~ 318 (364)
T KOG0290|consen 256 NYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQ 318 (364)
T ss_pred hHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecc
Confidence 567765554 56889999976654 677899999999999964 578899999999999985
No 152
>KOG0301|consensus
Probab=99.71 E-value=2.9e-16 Score=101.19 Aligned_cols=117 Identities=15% Similarity=0.283 Sum_probs=100.0
Q ss_pred Cceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612 9 GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR 87 (131)
Q Consensus 9 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~ 87 (131)
+++...+ +|+..|.++..-|++ .+++|+.|.+|++|.- ......+.+|...|+.+++-++ ..|++++.|+.|+.|+
T Consensus 130 ~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~-~~~l~tf~gHtD~VRgL~vl~~-~~flScsNDg~Ir~w~ 206 (745)
T KOG0301|consen 130 GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG-GTLLKTFSGHTDCVRGLAVLDD-SHFLSCSNDGSIRLWD 206 (745)
T ss_pred hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC-CchhhhhccchhheeeeEEecC-CCeEeecCCceEEEEe
Confidence 3444445 899999999999987 7889999999999988 3335678899999999999875 4578999999999999
Q ss_pred CCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 88 TPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 88 ~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+ +|+++ ...+|...+.+++..+++..++++++|+++++|+.
T Consensus 207 ~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~ 248 (745)
T KOG0301|consen 207 L-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKK 248 (745)
T ss_pred c-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeec
Confidence 9 56666 78899999999998888899999999999999974
No 153
>KOG1445|consensus
Probab=99.71 E-value=5e-17 Score=104.58 Aligned_cols=129 Identities=15% Similarity=0.202 Sum_probs=101.9
Q ss_pred CEEEeCCCC-------ceeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccC
Q psy15612 1 MYLQSVSPG-------RQLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAAC 70 (131)
Q Consensus 1 i~iwd~~~~-------~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~ 70 (131)
|++|-++.+ +....+ .|.+.|.++.|+| ....|++++.|.+|++||+.+... ..+.+|...|.+++|||+
T Consensus 652 i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpd 731 (1012)
T KOG1445|consen 652 INLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPD 731 (1012)
T ss_pred EEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCC
Confidence 578887643 222334 7889999999999 466788999999999999998875 678999999999999999
Q ss_pred CCEEEEeCCCCeEEEeeCCCCceEEecC---CCCCeEEEEECCCCCEEEEecCC----CcEEEEEe
Q psy15612 71 GKWFVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISADDKYIVTGSGD----KKATVYEV 129 (131)
Q Consensus 71 ~~~~~~~~~~~~i~~w~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d----~~i~vw~~ 129 (131)
|+.+++.+.|+++++|+.++++.....+ .+.+-..+.|.-+|++++..+-| +++.+||.
T Consensus 732 Gr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~A 797 (1012)
T KOG1445|consen 732 GRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDA 797 (1012)
T ss_pred CcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhh
Confidence 9999999999999999999877652222 23444567788899988776544 46777764
No 154
>KOG0771|consensus
Probab=99.71 E-value=4.6e-16 Score=95.01 Aligned_cols=128 Identities=15% Similarity=0.194 Sum_probs=104.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---------------------------
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--------------------------- 52 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--------------------------- 52 (131)
+|+|+..+...+... .|...|.++.|+|||++|++.+.+ ..++|+..++..
T Consensus 168 lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l 246 (398)
T KOG0771|consen 168 LRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETL 246 (398)
T ss_pred EEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceE
Confidence 588997766666555 889999999999999999999988 799999876610
Q ss_pred --EE------------ee--------------ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCC
Q psy15612 53 --YQ------------LH--------------LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSS 102 (131)
Q Consensus 53 --~~------------~~--------------~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~ 102 (131)
.. +. .....+.+++.+++|++++.++.+|.+.+++..+-+.. ....|...
T Consensus 247 ~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~ 326 (398)
T KOG0771|consen 247 RLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGF 326 (398)
T ss_pred EEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheee
Confidence 00 00 01236789999999999999999999999999887776 45569999
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 103 VLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 103 v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
|+.+.|+|+.+++++.+.|....+..+
T Consensus 327 VT~ltF~Pdsr~~~svSs~~~~~v~~l 353 (398)
T KOG0771|consen 327 VTGLTFSPDSRYLASVSSDNEAAVTKL 353 (398)
T ss_pred eeeEEEcCCcCcccccccCCceeEEEE
Confidence 999999999999998888887777654
No 155
>KOG2055|consensus
Probab=99.70 E-value=1.1e-15 Score=94.62 Aligned_cols=129 Identities=17% Similarity=0.291 Sum_probs=105.3
Q ss_pred CEEEeCCCCceeeee---cCC-CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH---DFS-SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~-~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
++.||+++.+..+.- +++ ..+...+.+|++++|+..+.+|.|.+....+++...-..-.+.+..++|+.|++.++.
T Consensus 282 ~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~ 361 (514)
T KOG2055|consen 282 LYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLA 361 (514)
T ss_pred EEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEE
Confidence 368999988766543 333 3577888999999999999999999999998886544456778999999999999999
Q ss_pred eCCCCeEEEeeCCCCceEEecCCCCCe--EEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 77 TGKDNLLNAWRTPYGASIFQSKESSSV--LSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++.+|.|++||++...++......+.+ ++++.++++.++++|+..|.|.|||.
T Consensus 362 ~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~ 416 (514)
T KOG2055|consen 362 SGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDG 416 (514)
T ss_pred EcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEecc
Confidence 999999999999988777433333333 56777899999999999999999985
No 156
>KOG3881|consensus
Probab=99.70 E-value=2.2e-15 Score=91.64 Aligned_cols=130 Identities=10% Similarity=0.108 Sum_probs=110.1
Q ss_pred CEEEeCCCCceeeee----------cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEE
Q psy15612 1 MYLQSVSPGRQLQQH----------DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLR 66 (131)
Q Consensus 1 i~iwd~~~~~~~~~~----------~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~ 66 (131)
+++||+++.+.+..- ..+-.+.++.|-|. ...++++..-+.+++||.+.++. ..+.-.+..+.++.
T Consensus 175 lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~ 254 (412)
T KOG3881|consen 175 LKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTG 254 (412)
T ss_pred eeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeee
Confidence 579999987665432 12234578888877 78899999999999999987663 55566678899999
Q ss_pred EccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 67 FAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 67 ~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
..|+++.++++..-+.+..||.+.++.. ...+..+.+.++..+|.++++++++-|+.++|+|+.
T Consensus 255 l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~k 320 (412)
T KOG3881|consen 255 LTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIK 320 (412)
T ss_pred ecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecc
Confidence 9999999999999999999999999988 477889999999999999999999999999999974
No 157
>KOG2048|consensus
Probab=99.69 E-value=6.4e-15 Score=94.81 Aligned_cols=128 Identities=20% Similarity=0.253 Sum_probs=104.2
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCCEEEEe
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
--||+.+++....+ ...+.|.+++.+|.+..++.|+.||.+..++....++ ..+...++.+.+++|+|++..++.|
T Consensus 93 ~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~G 172 (691)
T KOG2048|consen 93 TEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGG 172 (691)
T ss_pred EEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEec
Confidence 46999999988888 5667899999999999999999999777777777765 2345567899999999999999999
Q ss_pred CCCCeEEEeeCCCCceEE-----ecC----CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 78 GKDNLLNAWRTPYGASIF-----QSK----ESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~~-----~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+.|+.|++||..++..+. ... ..-.|+++.+-.++ .+++|...|+|++||..
T Consensus 173 s~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~ 233 (691)
T KOG2048|consen 173 SIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSI 233 (691)
T ss_pred ccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEccc
Confidence 999999999999888763 111 23446777777554 47788889999999964
No 158
>KOG1009|consensus
Probab=99.68 E-value=3.1e-15 Score=91.38 Aligned_cols=115 Identities=17% Similarity=0.298 Sum_probs=96.3
Q ss_pred cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCC-------e---EEeeccccceEEEEEccCCCEEEEeCCCCeEE
Q psy15612 16 DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPD-------K---YQLHLHESCVLSLRFAACGKWFVSTGKDNLLN 84 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~-------~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~ 84 (131)
....++.++.|.++.. .+++|+.|..+++|-+.... + ..+..|...|..+.|+|+|..+++++.++.+.
T Consensus 11 H~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~ 90 (434)
T KOG1009|consen 11 HDHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVF 90 (434)
T ss_pred cCCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEE
Confidence 3557899999998776 99999999999999876432 1 23567999999999999999999999999999
Q ss_pred EeeCC--------C------CceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 85 AWRTP--------Y------GASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 85 ~w~~~--------~------~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+|-.. + ...+ .+.+|...+..++|+|+++++++++.|..+++||++
T Consensus 91 lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~ 153 (434)
T KOG1009|consen 91 LWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVH 153 (434)
T ss_pred EEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEec
Confidence 99655 2 1122 345688999999999999999999999999999985
No 159
>KOG1310|consensus
Probab=99.68 E-value=5.5e-16 Score=98.26 Aligned_cols=115 Identities=16% Similarity=0.214 Sum_probs=98.0
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EE-eeccccceEEEEEccC--CCEEEEeCCCCeEEEeeCCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQ-LHLHESCVLSLRFAAC--GKWFVSTGKDNLLNAWRTPYG 91 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~-~~~~~~~v~~~~~~~~--~~~~~~~~~~~~i~~w~~~~~ 91 (131)
+|++.|++++|+.+|.+|++|+.|..+.+||....+. .. -.+|...|.+++|-|. .+.++++..|..|+++|+...
T Consensus 48 GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~ 127 (758)
T KOG1310|consen 48 GHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSS 127 (758)
T ss_pred cccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecccc
Confidence 8999999999999999999999999999999986664 33 3689999999999994 567889999999999998742
Q ss_pred ceE-----------EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612 92 ASI-----------FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 92 ~~~-----------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~ 130 (131)
+.- ....|...|..++-.|++ ..+.++++||+++-+|+|
T Consensus 128 ~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiR 178 (758)
T KOG1310|consen 128 KEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIR 178 (758)
T ss_pred cccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeeccc
Confidence 211 233477889999999988 678899999999999987
No 160
>KOG1034|consensus
Probab=99.68 E-value=2.3e-15 Score=89.99 Aligned_cols=89 Identities=19% Similarity=0.287 Sum_probs=80.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCeEE----eeccccceEEEEEccCCCEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSG-EWLAVGMENSNVEVLHALKPDKYQ----LHLHESCVLSLRFAACGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~ 74 (131)
||+.|..+++....+ +|...|+.+.++|+. +++++++.|..|++|++.+..+.. ..+|...|.++.|+++|.+|
T Consensus 117 IrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i 196 (385)
T KOG1034|consen 117 IRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRI 196 (385)
T ss_pred EEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCee
Confidence 688899888888877 999999999999974 678899999999999999988643 35799999999999999999
Q ss_pred EEeCCCCeEEEeeCC
Q psy15612 75 VSTGKDNLLNAWRTP 89 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~ 89 (131)
++++.|..+.+|++.
T Consensus 197 ~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 197 ASCGMDHSLKLWRLN 211 (385)
T ss_pred eccCCcceEEEEecC
Confidence 999999999999976
No 161
>KOG1539|consensus
Probab=99.68 E-value=9.5e-15 Score=96.07 Aligned_cols=128 Identities=20% Similarity=0.251 Sum_probs=111.1
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc-ccceEEEEEccCCCEE-EEe
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH-ESCVLSLRFAACGKWF-VST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~-~~~ 77 (131)
+++|++++++.+.++ ++...|.++.-+|.=..++.|..+|+|.+++++..+......+ .+.|..+.|.-||+.+ +++
T Consensus 184 lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~ 263 (910)
T KOG1539|consen 184 LQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASG 263 (910)
T ss_pred EEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEec
Confidence 479999999999999 7889999999999888999999999999999999987444444 5999999999999865 556
Q ss_pred CCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 78 GKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+..|.+.+||+...+.. ....|.+.+....|-|....+++++.|..+++|=
T Consensus 264 ~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~v 316 (910)
T KOG1539|consen 264 RSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWV 316 (910)
T ss_pred cCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEE
Confidence 66789999999987776 4557888999999999999999999999999883
No 162
>KOG2919|consensus
Probab=99.68 E-value=2.8e-15 Score=89.64 Aligned_cols=130 Identities=17% Similarity=0.250 Sum_probs=98.7
Q ss_pred CEEEeC-CCCceee---ee-----cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEcc
Q psy15612 1 MYLQSV-SPGRQLQ---QH-----DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAA 69 (131)
Q Consensus 1 i~iwd~-~~~~~~~---~~-----~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~ 69 (131)
|+++|+ +.|+-.. ++ +..+-+.+++|+|. .+.++.++....+-++.-.... +..+.+|.+.|..+.|.+
T Consensus 181 irvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~e 260 (406)
T KOG2919|consen 181 IRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCE 260 (406)
T ss_pred EEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEecc
Confidence 678888 5554322 22 23567899999995 5588999998888888876665 456678999999999999
Q ss_pred CCCEEEEeCC-CCeEEEeeCCCCceE--EecCCCC-CeEEEE--ECCCCCEEEEecCCCcEEEEEee
Q psy15612 70 CGKWFVSTGK-DNLLNAWRTPYGASI--FQSKESS-SVLSCD--ISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 70 ~~~~~~~~~~-~~~i~~w~~~~~~~~--~~~~~~~-~v~~~~--~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+|+.+.++++ +..|..||++..+.+ .+..|.. .-..+- ..|++++|++|+.||.|++||+.
T Consensus 261 dGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk 327 (406)
T KOG2919|consen 261 DGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLK 327 (406)
T ss_pred CcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecC
Confidence 9999999877 667999999976554 3333433 333444 46899999999999999999974
No 163
>KOG0270|consensus
Probab=99.67 E-value=1.2e-15 Score=94.04 Aligned_cols=115 Identities=11% Similarity=0.115 Sum_probs=94.5
Q ss_pred cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCeEE-eeccccceEEEEEccC-CCEEEEeCCCCeEEEeeCCCCc
Q psy15612 16 DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDKYQ-LHLHESCVLSLRFAAC-GKWFVSTGKDNLLNAWRTPYGA 92 (131)
Q Consensus 16 ~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~w~~~~~~ 92 (131)
+|...|.++.|+.. ...|++|+.|.+|.+||+.++++.. +..|...|.++.|+|. ...+++|+.|+++.+.|.+...
T Consensus 241 gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~ 320 (463)
T KOG0270|consen 241 GHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPS 320 (463)
T ss_pred cchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCcc
Confidence 46677888888775 5578999999999999999999844 5558889999999996 5678999999999999999644
Q ss_pred eE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 93 SI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 93 ~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
.. ..-...+.|-.++|.|... .++++..||+++-+|+|
T Consensus 321 ~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R 360 (463)
T KOG0270|consen 321 NSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIR 360 (463)
T ss_pred ccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecC
Confidence 44 4445678899999999765 45677789999999987
No 164
>KOG0321|consensus
Probab=99.67 E-value=1.2e-15 Score=97.74 Aligned_cols=115 Identities=17% Similarity=0.230 Sum_probs=88.4
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCC-CEEEEeCCCCeEEEeeCCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACG-KWFVSTGKDNLLNAWRTPYG 91 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~~~ 91 (131)
.|...|..+.|-|....|++++.|.+++.||+.+..+ ....+|...+.+++|.|.. ..|++|++|+.+.+||++..
T Consensus 98 aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n 177 (720)
T KOG0321|consen 98 AHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCN 177 (720)
T ss_pred cccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEecc
Confidence 6888999999999777889999999999999998875 3368899999999999964 57889999999999997632
Q ss_pred ceE----------------------------EecCCCCCeEE---EEECCCCCEEEEecC-CCcEEEEEee
Q psy15612 92 ASI----------------------------FQSKESSSVLS---CDISADDKYIVTGSG-DKKATVYEVI 130 (131)
Q Consensus 92 ~~~----------------------------~~~~~~~~v~~---~~~~~~~~~l~~~~~-d~~i~vw~~~ 130 (131)
..- ..+.+...+.+ +-+..|...|++++. |+.|+||||+
T Consensus 178 ~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLR 248 (720)
T KOG0321|consen 178 GVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLR 248 (720)
T ss_pred chhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeec
Confidence 200 00112333333 344456677777776 9999999996
No 165
>KOG1007|consensus
Probab=99.67 E-value=2.7e-15 Score=88.55 Aligned_cols=128 Identities=18% Similarity=0.251 Sum_probs=99.4
Q ss_pred CEEEeCCCCce-eeee------cCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCe-EE-eeccccceEEEEEcc
Q psy15612 1 MYLQSVSPGRQ-LQQH------DFSSQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPDK-YQ-LHLHESCVLSLRFAA 69 (131)
Q Consensus 1 i~iwd~~~~~~-~~~~------~~~~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~-~~-~~~~~~~v~~~~~~~ 69 (131)
|.+|+++.+.. ...+ ++.....+-+|+| +++.+++. .++++..||+++... .. ...|...+.++.|+|
T Consensus 146 i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNp 224 (370)
T KOG1007|consen 146 IVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNP 224 (370)
T ss_pred eEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhhcceeeeccCCC
Confidence 46888876544 2222 3445677888988 67787775 578999999997764 22 356888899999999
Q ss_pred CCC-EEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612 70 CGK-WFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 70 ~~~-~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~ 129 (131)
+.+ ++++++.|+.+++||.+..+.. .+.+|...+.++.|+|. .+++++++.|..|.+|..
T Consensus 225 nkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca 288 (370)
T KOG1007|consen 225 NKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCA 288 (370)
T ss_pred CceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEec
Confidence 866 5678899999999999976655 67789999999999995 456788999999988864
No 166
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=2.7e-14 Score=91.52 Aligned_cols=129 Identities=15% Similarity=0.086 Sum_probs=94.9
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEE-E
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFV-S 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~ 76 (131)
|.++|...........+...+...+|+|||+.|+..+. +..|.+||+.+++...+..+...+....|+|||+.++ +
T Consensus 184 l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~ 263 (435)
T PRK05137 184 LAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMS 263 (435)
T ss_pred EEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEE
Confidence 34667654444434467788999999999999887653 4679999999888777766777778899999999875 4
Q ss_pred eCCCC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CC--cEEEEEe
Q psy15612 77 TGKDN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DK--KATVYEV 129 (131)
Q Consensus 77 ~~~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~vw~~ 129 (131)
.+.++ .|+++|+.+++...+..+........|+|+|+.++..+. ++ .|.++|+
T Consensus 264 ~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~ 321 (435)
T PRK05137 264 LSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNA 321 (435)
T ss_pred EecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEEC
Confidence 45444 477789888877655556666778999999998876653 33 4555554
No 167
>KOG4378|consensus
Probab=99.66 E-value=4.3e-15 Score=93.28 Aligned_cols=128 Identities=16% Similarity=0.240 Sum_probs=102.5
Q ss_pred EEeCCCCceeeeecC--CCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccC-CCEEEE
Q psy15612 3 LQSVSPGRQLQQHDF--SSQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAAC-GKWFVS 76 (131)
Q Consensus 3 iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~-~~~~~~ 76 (131)
|-.+.++.....+.+ ...|.-+.++|..+++ .+++.+|.|.+||..+... .....|..+...++|+|. ...|++
T Consensus 147 ih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vs 226 (673)
T KOG4378|consen 147 IHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVS 226 (673)
T ss_pred EEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEE
Confidence 445555555555543 3456789999987765 5688999999999986654 345679999999999995 456778
Q ss_pred eCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.+.|..|.+||.+..+.........+...++|+++|.+|+.|...|.+..||+|
T Consensus 227 VG~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R 280 (673)
T KOG4378|consen 227 VGYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAGNSKGELIAYDMR 280 (673)
T ss_pred ecccceEEEeecccccccceeeecCCcceeeecCCceEEEeecCCceEEEEecc
Confidence 899999999999976666555567788899999999999999999999999987
No 168
>KOG1274|consensus
Probab=99.66 E-value=1.1e-14 Score=96.46 Aligned_cols=127 Identities=18% Similarity=0.228 Sum_probs=103.2
Q ss_pred EEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612 3 LQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 3 iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
+|....++.-..+ ...-++..++++.+|++++.|+.|-.|++.+..... ...+.+|.++|.++.|+|++.++++.+.|
T Consensus 80 ~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~d 159 (933)
T KOG1274|consen 80 RYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCD 159 (933)
T ss_pred EeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecC
Confidence 4444444444334 455678899999999999999999999999987554 57788999999999999999999999999
Q ss_pred CeEEEeeCCCCceE-EecC--------CCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 81 NLLNAWRTPYGASI-FQSK--------ESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 81 ~~i~~w~~~~~~~~-~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
|.+++||+.++... .+.+ ....+..++|+|++..++..+.|+.|++|+.
T Consensus 160 G~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r 217 (933)
T KOG1274|consen 160 GKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSR 217 (933)
T ss_pred ceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEcc
Confidence 99999999988776 2211 2455688999999888888888999999874
No 169
>KOG4378|consensus
Probab=99.66 E-value=2.4e-15 Score=94.35 Aligned_cols=130 Identities=14% Similarity=0.197 Sum_probs=106.8
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc--ccceEEEEEccCCCEE-EE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH--ESCVLSLRFAACGKWF-VS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~-~~ 76 (131)
|+|||++.+.+.+.+ +|+..|.++.++-...+|++++..|.|.+..+.++....-..+ ...+.-+.|+|..+.+ .+
T Consensus 103 Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~ 182 (673)
T KOG4378|consen 103 VKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSI 182 (673)
T ss_pred eeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEe
Confidence 689999966666666 8999999999999999999999999999999988876433333 3456789999987754 56
Q ss_pred eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
++.+|.+.+||....... ....|..+...++|+|... ++++.+.|.+|.+||++
T Consensus 183 asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~ 239 (673)
T KOG4378|consen 183 ASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIR 239 (673)
T ss_pred eccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecc
Confidence 788999999999866655 5667999999999999655 66888999999999975
No 170
>KOG1523|consensus
Probab=99.66 E-value=1e-14 Score=86.99 Aligned_cols=128 Identities=13% Similarity=0.145 Sum_probs=104.6
Q ss_pred EEEeCCCCc---eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC-CCC---eEEeeccccceEEEEEccCCCE
Q psy15612 2 YLQSVSPGR---QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL-KPD---KYQLHLHESCVLSLRFAACGKW 73 (131)
Q Consensus 2 ~iwd~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~-~~~---~~~~~~~~~~v~~~~~~~~~~~ 73 (131)
.||.....+ ...++ .|...|+.++|+|..+.|++++.|..-++|... .+. ...+..+.....++.|+|.++.
T Consensus 35 hiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enk 114 (361)
T KOG1523|consen 35 HIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENK 114 (361)
T ss_pred EEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCce
Confidence 455554333 44555 788999999999999999999999999999984 333 2456678889999999999999
Q ss_pred EEEeCCCCeEEEeeCCCCceE-----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 74 FVSTGKDNLLNAWRTPYGASI-----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
|++++..+.|.+|-.+...-- ..++..+.|.+++|+|++-+++.|+.|++.+|+..
T Consensus 115 FAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSa 175 (361)
T KOG1523|consen 115 FAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSA 175 (361)
T ss_pred EEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEE
Confidence 999999999999987644332 34457899999999999999999999999999864
No 171
>KOG2394|consensus
Probab=99.66 E-value=3.2e-15 Score=94.37 Aligned_cols=113 Identities=20% Similarity=0.345 Sum_probs=87.8
Q ss_pred CCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCC-----C---------eE---------------EeeccccceEEEEE
Q psy15612 18 SSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKP-----D---------KY---------------QLHLHESCVLSLRF 67 (131)
Q Consensus 18 ~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~-----~---------~~---------------~~~~~~~~v~~~~~ 67 (131)
...|.+++|-|.+. .++.+-.+|.+.++|..-. . .. ...-....|..++|
T Consensus 219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F 298 (636)
T KOG2394|consen 219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF 298 (636)
T ss_pred ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence 36799999988544 5566677888998865311 0 00 01112346788999
Q ss_pred ccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 68 AACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+|||+++++.++|+.++|||..+.+.+ ..+..-+...|++|||||+++++|++|.-|.||.+.
T Consensus 299 S~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~ 362 (636)
T KOG2394|consen 299 SPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFE 362 (636)
T ss_pred cCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEec
Confidence 999999999999999999999887776 455556788999999999999999999999999863
No 172
>KOG1408|consensus
Probab=99.65 E-value=4.1e-15 Score=97.02 Aligned_cols=128 Identities=20% Similarity=0.236 Sum_probs=102.5
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEe
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGM--ENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
-+||.+..+.-..+ .+...+.+++|+++|+++++|. ....+++|++.... +..+..|+-.+.|++|+|.++++++.
T Consensus 61 Vlfn~~~~tQ~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp~~kyvvSV 140 (1080)
T KOG1408|consen 61 VLFNVDSCTQSHLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSPGNKYVVSV 140 (1080)
T ss_pred EEEcccccchhheecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccchhhhhhccccceeeeecCCCcEEEee
Confidence 46676655544444 6777999999999999999985 56679999998655 46778899999999999999999876
Q ss_pred CC--CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 78 GK--DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 78 ~~--~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+. |-.+.+||++.........-.+.|..++|+.+|.|+++.+ ++.|++|.+.
T Consensus 141 GsQHDMIVnv~dWr~N~~~asnkiss~Vsav~fsEdgSYfvT~g-nrHvk~wyl~ 194 (1080)
T KOG1408|consen 141 GSQHDMIVNVNDWRVNSSGASNKISSVVSAVAFSEDGSYFVTSG-NRHVKLWYLQ 194 (1080)
T ss_pred ccccceEEEhhhhhhcccccccccceeEEEEEEccCCceeeeee-eeeEEEEEee
Confidence 54 4457889987554445555678899999999999998875 5789999885
No 173
>KOG4328|consensus
Probab=99.65 E-value=1.7e-15 Score=93.73 Aligned_cols=130 Identities=12% Similarity=0.086 Sum_probs=101.4
Q ss_pred CEEEeCCCCce----eeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCeE---EeeccccceEEEEEccCC
Q psy15612 1 MYLQSVSPGRQ----LQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDKY---QLHLHESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~~~----~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~ 71 (131)
|-+||+.+.+. +..+ .|.++|.++.|+|. ...+++.+.||+++.-|+++.... ........+..+.|+.+.
T Consensus 212 VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~ 291 (498)
T KOG4328|consen 212 VGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAES 291 (498)
T ss_pred EEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCC
Confidence 45899953222 2222 78899999999995 557889999999999999887642 233345567788898888
Q ss_pred CEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 72 KWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 72 ~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
+.++.+..-|.+.+||.+++... ...-|...|.+++++|... ++++++.|++++|||+|
T Consensus 292 ~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R 353 (498)
T KOG4328|consen 292 RSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLR 353 (498)
T ss_pred ccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehh
Confidence 87778877779999999987664 4555777999999999655 57899999999999986
No 174
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.64 E-value=1.8e-13 Score=85.93 Aligned_cols=129 Identities=24% Similarity=0.363 Sum_probs=104.7
Q ss_pred CEEEeCCC-Cceeeee-cCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCC-eEEeeccccceEEEEEccCCC-EEE
Q psy15612 1 MYLQSVSP-GRQLQQH-DFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGK-WFV 75 (131)
Q Consensus 1 i~iwd~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~~~ 75 (131)
+++||... ......+ .|...+..+.|+|++..++.++. ++.+.+|+..... ...+..|...+.+++|+|++. .++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 215 (466)
T COG2319 136 VKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIA 215 (466)
T ss_pred EEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEE
Confidence 46888887 5555555 88899999999999998888875 9999999998755 455666899999999999998 555
Q ss_pred EeCCCCeEEEeeCCCCceEE--ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 76 STGKDNLLNAWRTPYGASIF--QSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++.|+.+.+||...+.... ...|.... ...|+|++..+++++.|+.+++|++.
T Consensus 216 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~ 271 (466)
T COG2319 216 SGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLR 271 (466)
T ss_pred EecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeec
Confidence 55899999999988776664 45565554 33899999888899999999999985
No 175
>KOG0771|consensus
Probab=99.64 E-value=6.9e-15 Score=89.99 Aligned_cols=107 Identities=24% Similarity=0.335 Sum_probs=89.6
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE------
Q psy15612 22 FSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI------ 94 (131)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~------ 94 (131)
..++|+++|..+++++.||.+++|+..+.. ......|..+|.++.|+|||+.+++-+.| ..++|+..+|..+
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 789999999999999999999999965544 56678899999999999999999999988 8899998877211
Q ss_pred ------------------------EecC-------------------------CCCCeEEEEECCCCCEEEEecCCCcEE
Q psy15612 95 ------------------------FQSK-------------------------ESSSVLSCDISADDKYIVTGSGDKKAT 125 (131)
Q Consensus 95 ------------------------~~~~-------------------------~~~~v~~~~~~~~~~~l~~~~~d~~i~ 125 (131)
...+ ....+++++.+++|++++.|+.||.|.
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa 306 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA 306 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence 0000 023688999999999999999999999
Q ss_pred EEEe
Q psy15612 126 VYEV 129 (131)
Q Consensus 126 vw~~ 129 (131)
+++.
T Consensus 307 i~~~ 310 (398)
T KOG0771|consen 307 IYDA 310 (398)
T ss_pred EEEe
Confidence 9875
No 176
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.64 E-value=9.8e-14 Score=88.76 Aligned_cols=129 Identities=16% Similarity=0.093 Sum_probs=92.4
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe---CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM---ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|.++|...........+...+...+|+|||+.|+..+ .+..+.++++.+++...+...........|+|||+.++..
T Consensus 181 l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~ 260 (429)
T PRK03629 181 LRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFA 260 (429)
T ss_pred EEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEE
Confidence 3566766444444446667899999999999988654 2356889999888765555444555678999999988754
Q ss_pred -CCCC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612 78 -GKDN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEV 129 (131)
Q Consensus 78 -~~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~ 129 (131)
+.++ .|++||+.+++...+......+....|+|+|+.++..+. ++...+|.+
T Consensus 261 ~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~ 316 (429)
T PRK03629 261 LSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKV 316 (429)
T ss_pred EcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEE
Confidence 4344 588999988877655555567788999999998876654 455566643
No 177
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.64 E-value=4.7e-14 Score=90.35 Aligned_cols=128 Identities=13% Similarity=0.045 Sum_probs=92.1
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE-
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS- 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~- 76 (131)
|.+||...........+...+....|+|||+.|+..+. ...+.+|++.+++...+....+......|+|||+.++.
T Consensus 186 l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~ 265 (433)
T PRK04922 186 LQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALT 265 (433)
T ss_pred EEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEE
Confidence 45778764444444466778999999999999988764 34699999988877666555555668899999997754
Q ss_pred eCCCC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEE
Q psy15612 77 TGKDN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVYE 128 (131)
Q Consensus 77 ~~~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~ 128 (131)
.+.++ .|++||+.+++...+..+.......+|+|+|++++..+. ++...+|.
T Consensus 266 ~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~ 320 (433)
T PRK04922 266 LSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYR 320 (433)
T ss_pred EeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEE
Confidence 44444 599999988876655555555677899999998876653 45544443
No 178
>KOG1963|consensus
Probab=99.63 E-value=5.2e-14 Score=92.75 Aligned_cols=114 Identities=23% Similarity=0.368 Sum_probs=100.8
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC--CC---eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK--PD---KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY 90 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~--~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~ 90 (131)
.|.-.+.+.+++|.++.++++..||.|.+|.-.. .. ...+.-|..+|.++.|+++|.++++|++.+.+.+|.+.+
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T 282 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET 282 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence 4666689999999999999999999999996543 22 456778999999999999999999999999999999999
Q ss_pred CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 91 GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++..++..-++.|..+.++||+.+.+....|.+|.+-..
T Consensus 283 ~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~ 321 (792)
T KOG1963|consen 283 GKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKA 321 (792)
T ss_pred CCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEec
Confidence 997788888999999999999999988888999887643
No 179
>KOG1523|consensus
Probab=99.63 E-value=2.4e-14 Score=85.41 Aligned_cols=113 Identities=18% Similarity=0.220 Sum_probs=100.4
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeC-CCC
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRT-PYG 91 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~-~~~ 91 (131)
..++|++.+|++|+..++.+..+..+.+|...+.. ...+..|...+..+.|+|..+.|++++.|+.-++|.. ..+
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~ 88 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG 88 (361)
T ss_pred ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCC
Confidence 45789999999999999999999999999987766 2567889999999999999999999999999999998 444
Q ss_pred ceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 92 ASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 92 ~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+.. .+..++....++.|+|.++.+++|+..+.|.||.+
T Consensus 89 ~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~ 129 (361)
T KOG1523|consen 89 TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYY 129 (361)
T ss_pred eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEE
Confidence 443 67778999999999999999999999999999875
No 180
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=1.2e-13 Score=88.33 Aligned_cols=129 Identities=18% Similarity=0.169 Sum_probs=90.2
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCC--cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENS--NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~--~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++||+.+++........+....+.|+|||+.|+.. ..++ .|.+||+.++....+..+...+....|+|||+.++..
T Consensus 225 i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~ 304 (429)
T PRK03629 225 LVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYT 304 (429)
T ss_pred EEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEE
Confidence 467888877655444444556678999999988765 3344 5888999988877766666677889999999988766
Q ss_pred CCC-C--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC---CcEEEEEe
Q psy15612 78 GKD-N--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD---KKATVYEV 129 (131)
Q Consensus 78 ~~~-~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vw~~ 129 (131)
+.+ + .++.+|+.+++...............|+|+|++++..+.+ ..+.+||+
T Consensus 305 s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl 362 (429)
T PRK03629 305 SDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 362 (429)
T ss_pred eCCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEEC
Confidence 543 3 4555577766655433344455678999999998765543 34667775
No 181
>KOG0307|consensus
Probab=99.62 E-value=2.3e-15 Score=101.33 Aligned_cols=116 Identities=15% Similarity=0.240 Sum_probs=89.4
Q ss_pred cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe-EEe--eccccceEEEEEccC-CCEEEEeCCCCeEEEeeCCC
Q psy15612 16 DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK-YQL--HLHESCVLSLRFAAC-GKWFVSTGKDNLLNAWRTPY 90 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~-~~~--~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~w~~~~ 90 (131)
.|.+.|..+.|++... .|++|+.+|.|.+||+...+. ... ......|.+++|+.. .+.|++++.++...|||++.
T Consensus 114 ~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~ 193 (1049)
T KOG0307|consen 114 KHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRK 193 (1049)
T ss_pred ccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccC
Confidence 7999999999999755 999999999999999987553 222 235678999999975 44577888888999999998
Q ss_pred CceE-EecC--CCCCeEEEEECCCCC-EEEEecCCC---cEEEEEeeC
Q psy15612 91 GASI-FQSK--ESSSVLSCDISADDK-YIVTGSGDK---KATVYEVIY 131 (131)
Q Consensus 91 ~~~~-~~~~--~~~~v~~~~~~~~~~-~l~~~~~d~---~i~vw~~~~ 131 (131)
.+.+ .+.. ....+..++|+|+.. .+++++.|. .|.+||+||
T Consensus 194 ~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~ 241 (1049)
T KOG0307|consen 194 KKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRF 241 (1049)
T ss_pred CCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccc
Confidence 7666 2222 235588999999754 566666543 599999986
No 182
>KOG2106|consensus
Probab=99.62 E-value=8.6e-14 Score=87.58 Aligned_cols=120 Identities=15% Similarity=0.169 Sum_probs=98.3
Q ss_pred CCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612 7 SPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAW 86 (131)
Q Consensus 7 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w 86 (131)
+++..+..++|..+...++.+|+..++++++.|+.+++|+ ..++.--..-..+..++.|+|.| .++.+...|.-.+.
T Consensus 357 ~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~ 433 (626)
T KOG2106|consen 357 ENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVL 433 (626)
T ss_pred cCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEE
Confidence 3444555568888999999999999999999999999999 22322222234567899999999 89999999999999
Q ss_pred eCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 87 RTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
|.++...+.....++.+.+++|+|+|.+++.|+.|+.|.+|.+
T Consensus 434 d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~V 476 (626)
T KOG2106|consen 434 DTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRV 476 (626)
T ss_pred ecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEE
Confidence 9998666644444899999999999999999999999999875
No 183
>KOG1408|consensus
Probab=99.62 E-value=2.8e-14 Score=93.24 Aligned_cols=111 Identities=14% Similarity=0.253 Sum_probs=101.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eee---ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLH---LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
..++.|+..|..+++++++.|..|++|++.+++.. .+. .|++....+...|.|.++++.+.|.++.++|.-+|+++
T Consensus 597 tTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcv 676 (1080)
T KOG1408|consen 597 TTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECV 676 (1080)
T ss_pred ceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhh
Confidence 45899999999999999999999999999998863 333 46677888999999999999999999999999999999
Q ss_pred -EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 95 -FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 95 -~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
...+|...|+.+.|.+|.+.|++.+.||.|.||.+
T Consensus 677 A~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~l 712 (1080)
T KOG1408|consen 677 AQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKL 712 (1080)
T ss_pred hhhcCcchheeeeeecccchhheeecCCceEEEEEC
Confidence 78899999999999999999999999999999986
No 184
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=1.4e-13 Score=88.23 Aligned_cols=129 Identities=13% Similarity=0.084 Sum_probs=93.4
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE-EeCCCc--EEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV-GMENSN--VEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~--v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++||+.+++......+.+.+....|+|||+.|+. .+.++. |.++|+.++....+..+........|+|||+.++..
T Consensus 228 i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~ 307 (435)
T PRK05137 228 VYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFE 307 (435)
T ss_pred EEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEE
Confidence 57899988877654466677888999999998764 444444 777799888877777666667789999999988766
Q ss_pred CC-C--CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC---CcEEEEEe
Q psy15612 78 GK-D--NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD---KKATVYEV 129 (131)
Q Consensus 78 ~~-~--~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vw~~ 129 (131)
+. + ..++++|..+++..........+....|+|+|+.++..+.+ ..+.+||+
T Consensus 308 s~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~ 365 (435)
T PRK05137 308 SDRSGSPQLYVMNADGSNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKP 365 (435)
T ss_pred ECCCCCCeEEEEECCCCCeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEEC
Confidence 53 3 35888888776655443345556678899999998776543 24666664
No 185
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=2e-13 Score=87.37 Aligned_cols=128 Identities=13% Similarity=0.059 Sum_probs=88.7
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEE-Ee
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFV-ST 77 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~ 77 (131)
.++|...........+...+.+.+|+|||+.|+..+.. ..+.+||+.+++...+...........|+|||+.++ +.
T Consensus 179 ~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~ 258 (427)
T PRK02889 179 QISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVAL 258 (427)
T ss_pred EEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEE
Confidence 34555333333334667789999999999999876542 459999999888766655556667899999999886 45
Q ss_pred CCCCeEEEe--eCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612 78 GKDNLLNAW--RTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEV 129 (131)
Q Consensus 78 ~~~~~i~~w--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~ 129 (131)
+.++...+| |..++....+..+........|+|+|+.++..+. ++...+|.+
T Consensus 259 ~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~ 313 (427)
T PRK02889 259 SRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRM 313 (427)
T ss_pred ccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEE
Confidence 667665555 5555554444445555677899999998876554 466677754
No 186
>KOG0650|consensus
Probab=99.61 E-value=3.9e-15 Score=95.07 Aligned_cols=127 Identities=17% Similarity=0.178 Sum_probs=104.3
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|+|||+..++.++.+ .....|..++.+|.|..|+.++.|+.+..+|+.... ...+..|...+..++|++.-.+|+++
T Consensus 589 vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~ 668 (733)
T KOG0650|consen 589 VRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASG 668 (733)
T ss_pred eEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeee
Confidence 689999887777776 556679999999999999999999999999997553 35677789999999999999999999
Q ss_pred CCCCeEEEee------C-CCCceE---EecCCCC----CeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612 78 GKDNLLNAWR------T-PYGASI---FQSKESS----SVLSCDISADDKYIVTGSGDKKATVY 127 (131)
Q Consensus 78 ~~~~~i~~w~------~-~~~~~~---~~~~~~~----~v~~~~~~~~~~~l~~~~~d~~i~vw 127 (131)
+.|+.+.++. + ++.-.+ .+.+|.. .|....|+|...++++++.|++|++|
T Consensus 669 sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 669 SDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred cCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 9999998884 2 122222 3344543 38888999999999999999999998
No 187
>KOG4227|consensus
Probab=99.61 E-value=1.1e-14 Score=89.49 Aligned_cols=115 Identities=17% Similarity=0.213 Sum_probs=99.2
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC------CeEEe--eccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP------DKYQL--HLHESCVLSLRFAACGKWFVSTGKDNLLNAWR 87 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~------~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~ 87 (131)
+|.+.|.++.|+.++++|++|+.|..+++|.+... +...+ ..|.+.|.+++|....+.+++|.+++++..-|
T Consensus 54 ~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HD 133 (609)
T KOG4227|consen 54 EHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHD 133 (609)
T ss_pred hhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeee
Confidence 78999999999999999999999999999998632 22222 34668899999999888999999999999999
Q ss_pred CCCCceEEecC---CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 88 TPYGASIFQSK---ESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 88 ~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+.+.+.+.... ..+.|..+..+|..+.+++.+.++.|.+||.+
T Consensus 134 iEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~R 179 (609)
T KOG4227|consen 134 IETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNR 179 (609)
T ss_pred cccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEecc
Confidence 99998884443 45699999999999999999999999999986
No 188
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.61 E-value=5.7e-14 Score=89.88 Aligned_cols=125 Identities=18% Similarity=0.232 Sum_probs=83.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe-CCCcEEE--EeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM-ENSNVEV--LHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++||+++++........+....++|+|||+.|+.+. .++...+ +|+.++....+..+...+....|+|||+.++..
T Consensus 230 i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~ 309 (429)
T PRK01742 230 LVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFT 309 (429)
T ss_pred EEEEeCCCCceEEEecCCCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEE
Confidence 5789998876543333333445789999999888764 5776554 577777777777777778899999999987654
Q ss_pred -CCCCeEEEeeCCC--CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 78 -GKDNLLNAWRTPY--GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 78 -~~~~~i~~w~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
..++...+|++.. +..... .+.. ....|+|+|++++..+.++ +.+||+
T Consensus 310 s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl 360 (429)
T PRK01742 310 SDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDL 360 (429)
T ss_pred ECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEEC
Confidence 4567777776542 322222 2222 4567888888887766654 444765
No 189
>KOG2445|consensus
Probab=99.61 E-value=1.5e-13 Score=81.73 Aligned_cols=114 Identities=15% Similarity=0.237 Sum_probs=94.0
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----e-EEeeccccceEEEEEcc--CCCEEEEeCCCCeEEEeeC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----K-YQLHLHESCVLSLRFAA--CGKWFVSTGKDNLLNAWRT 88 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~-~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~w~~ 88 (131)
+|..-|.++.|.+-|+.+++++.|.++++||..... + .....|.+.|..+.|.+ -|+.+++++.|+++.+|.-
T Consensus 11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE 90 (361)
T KOG2445|consen 11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE 90 (361)
T ss_pred CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence 677889999999999999999999999999975433 2 34578999999999975 4999999999999999975
Q ss_pred CC------C-ceE---EecCCCCCeEEEEECCC--CCEEEEecCCCcEEEEEe
Q psy15612 89 PY------G-ASI---FQSKESSSVLSCDISAD--DKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 89 ~~------~-~~~---~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw~~ 129 (131)
.. + +.. .+....+.|..+.|.|. |-.+++++.||.++||+.
T Consensus 91 ~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA 143 (361)
T KOG2445|consen 91 QEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEA 143 (361)
T ss_pred cccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEec
Confidence 21 1 111 34567889999999985 667899999999999975
No 190
>KOG0642|consensus
Probab=99.61 E-value=8.3e-15 Score=92.65 Aligned_cols=114 Identities=19% Similarity=0.290 Sum_probs=98.3
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC---------eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD---------KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAW 86 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w 86 (131)
.|...+..++|+|....|++++.++.+.+|.+.... +.++.+|.++|.|+.+.+++..+++++.|++|+.|
T Consensus 292 s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w 371 (577)
T KOG0642|consen 292 SHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCW 371 (577)
T ss_pred cchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeee
Confidence 677889999999999999999999999999993211 35678999999999999999999999999999999
Q ss_pred eCC------CCc---eE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 87 RTP------YGA---SI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 87 ~~~------~~~---~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++. +.. .+ .+.+|.+.++.+++|+....|++++.||+++.|+.
T Consensus 372 ~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~ 425 (577)
T KOG0642|consen 372 NLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEP 425 (577)
T ss_pred ccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeecc
Confidence 543 211 22 56789999999999999888999999999999985
No 191
>KOG0644|consensus
Probab=99.61 E-value=6.4e-16 Score=101.84 Aligned_cols=111 Identities=14% Similarity=0.297 Sum_probs=102.8
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
+|...|+|..|...|..+++|+.|..+++|...+..+ ....+|.+.+.+++.+.+.-.+++++.|..|++|.+.++..+
T Consensus 188 gH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pv 267 (1113)
T KOG0644|consen 188 GHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPV 267 (1113)
T ss_pred hhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchH
Confidence 7888999999999999999999999999999988876 667899999999999988888999999999999999999999
Q ss_pred -EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 95 -FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 95 -~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.+.+|.+.|++++|+|-. +.+.||++++||.+
T Consensus 268 svLrghtgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 268 SVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred HHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence 888999999999999975 67789999999976
No 192
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.61 E-value=2.4e-13 Score=87.17 Aligned_cols=129 Identities=17% Similarity=0.179 Sum_probs=90.8
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE-EeCCC--cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV-GMENS--NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~--~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++||+.+++........+......|+|+|+.++. .+.++ .|.+||+.+++...+..+........|+|||+.++..
T Consensus 230 l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~ 309 (433)
T PRK04922 230 IYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFT 309 (433)
T ss_pred EEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEE
Confidence 46789888776544445555668899999998764 34444 5899999988877766665556678999999988766
Q ss_pred C-CCCe--EEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC-C--cEEEEEe
Q psy15612 78 G-KDNL--LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD-K--KATVYEV 129 (131)
Q Consensus 78 ~-~~~~--i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~vw~~ 129 (131)
+ .++. ++++++.+++.............++|+|+|++++..+.+ + .|.+||+
T Consensus 310 sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~ 367 (433)
T PRK04922 310 SDRGGRPQIYRVAASGGSAERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDL 367 (433)
T ss_pred ECCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEEC
Confidence 5 3443 667777777655333333445578999999998765433 2 5888885
No 193
>KOG2445|consensus
Probab=99.60 E-value=4.4e-13 Score=79.85 Aligned_cols=87 Identities=14% Similarity=0.217 Sum_probs=66.5
Q ss_pred CEEEeCCCCce----eeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCC-------C---eEEeeccccceE
Q psy15612 1 MYLQSVSPGRQ----LQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKP-------D---KYQLHLHESCVL 63 (131)
Q Consensus 1 i~iwd~~~~~~----~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~-------~---~~~~~~~~~~v~ 63 (131)
|+|||.+.... .... .|.+.|..+.|.+. |+.+++++.|+++.+|+-... + +..+....+.|.
T Consensus 37 vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~ 116 (361)
T KOG2445|consen 37 VKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVT 116 (361)
T ss_pred EEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCccee
Confidence 57999654322 2222 68899999999653 899999999999999986211 1 234555678899
Q ss_pred EEEEccC--CCEEEEeCCCCeEEEee
Q psy15612 64 SLRFAAC--GKWFVSTGKDNLLNAWR 87 (131)
Q Consensus 64 ~~~~~~~--~~~~~~~~~~~~i~~w~ 87 (131)
++.|.|. |-.+++++.||.++||+
T Consensus 117 DV~FaP~hlGLklA~~~aDG~lRIYE 142 (361)
T KOG2445|consen 117 DVKFAPKHLGLKLAAASADGILRIYE 142 (361)
T ss_pred EEEecchhcceEEEEeccCcEEEEEe
Confidence 9999994 77899999999999997
No 194
>KOG0642|consensus
Probab=99.60 E-value=5.8e-14 Score=88.93 Aligned_cols=90 Identities=12% Similarity=0.151 Sum_probs=73.2
Q ss_pred CEEEeCCC--------Cceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-----------eEEeecccc
Q psy15612 1 MYLQSVSP--------GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-----------KYQLHLHES 60 (131)
Q Consensus 1 i~iwd~~~--------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~ 60 (131)
|++|+++. -+++.++ +|.++|.++...+.+..+++|+.||+|+.|++.... ...+.+|..
T Consensus 318 lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtd 397 (577)
T KOG0642|consen 318 LKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTD 397 (577)
T ss_pred hhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceecccc
Confidence 45787721 2344455 899999999999999999999999999999765221 134678999
Q ss_pred ceEEEEEccCCCEEEEeCCCCeEEEeeCCC
Q psy15612 61 CVLSLRFAACGKWFVSTGKDNLLNAWRTPY 90 (131)
Q Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~ 90 (131)
.+..+++|+....+++++.|++++.|+...
T Consensus 398 avw~l~~s~~~~~Llscs~DgTvr~w~~~~ 427 (577)
T KOG0642|consen 398 AVWLLALSSTKDRLLSCSSDGTVRLWEPTE 427 (577)
T ss_pred ceeeeeecccccceeeecCCceEEeeccCC
Confidence 999999999888899999999999998543
No 195
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.59 E-value=5.1e-13 Score=85.51 Aligned_cols=129 Identities=20% Similarity=0.173 Sum_probs=86.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE-EeCCCcEEEE--eCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV-GMENSNVEVL--HALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~v~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++||+.+++........+......|+|||+.|+. .+.++...+| |+.++....+..+........|+|||+.++..
T Consensus 222 I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~ 301 (427)
T PRK02889 222 VYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFT 301 (427)
T ss_pred EEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEE
Confidence 46889988876554445566778999999998864 5666665555 55556666665555556678899999988765
Q ss_pred CC-CCeEEEe--eCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCC---cEEEEEe
Q psy15612 78 GK-DNLLNAW--RTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDK---KATVYEV 129 (131)
Q Consensus 78 ~~-~~~i~~w--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~vw~~ 129 (131)
+. ++...+| +..+++..............+|+|+|++++..+.++ .|.+||+
T Consensus 302 s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~ 359 (427)
T PRK02889 302 SDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDL 359 (427)
T ss_pred ecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEEC
Confidence 43 4555555 545555442222233345688999999988665543 5888886
No 196
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.59 E-value=6.3e-13 Score=84.80 Aligned_cols=129 Identities=16% Similarity=0.142 Sum_probs=92.7
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCC--CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MEN--SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~--~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++||+.+++......+.+.+..++|+|+++.|+.. ..+ ..+.+|++.++....+..+........|+|||+.++..
T Consensus 216 i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~ 295 (417)
T TIGR02800 216 IYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFT 295 (417)
T ss_pred EEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEE
Confidence 468899888765555556667789999999977654 333 35888999888766665555555577899999988765
Q ss_pred CC-CC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCC---cEEEEEe
Q psy15612 78 GK-DN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDK---KATVYEV 129 (131)
Q Consensus 78 ~~-~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~vw~~ 129 (131)
+. .+ .++++++.+++.............+.|+|+|++++.++.++ .|.+||+
T Consensus 296 s~~~g~~~iy~~d~~~~~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~ 353 (417)
T TIGR02800 296 SDRGGSPQIYMMDADGGEVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDL 353 (417)
T ss_pred ECCCCCceEEEEECCCCCEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeC
Confidence 43 33 57888888776654444556677889999999988776654 5777765
No 197
>KOG1524|consensus
Probab=99.58 E-value=1.3e-14 Score=91.96 Aligned_cols=119 Identities=16% Similarity=0.137 Sum_probs=94.5
Q ss_pred ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeC
Q psy15612 10 RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRT 88 (131)
Q Consensus 10 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~ 88 (131)
+..... .|.+.+.+-.|+|+|.-|++.++||.+++|.-.+--...+.....+|+|++|.|+.+.++.+.. +.+.+=.+
T Consensus 95 rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IKpL 173 (737)
T KOG1524|consen 95 RVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQG-GHISIKPL 173 (737)
T ss_pred hhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecC-CeEEEeec
Confidence 333334 6888899999999999999999999999999765444455566778999999998877665543 34444444
Q ss_pred CC-CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 89 PY-GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 89 ~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.. .+.+.-..|.+.|.++.|++...++++|++|-+.++||-
T Consensus 174 ~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~ 215 (737)
T KOG1524|consen 174 AANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA 215 (737)
T ss_pred ccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecc
Confidence 42 344477789999999999999999999999999999995
No 198
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.58 E-value=2.3e-12 Score=80.98 Aligned_cols=129 Identities=24% Similarity=0.381 Sum_probs=104.6
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCeE--EeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDKY--QLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
+++|+..+++.+..+ .|...+..++|+|++. .+++++.++.+.+||...+... .+..|.... ...|+|++..+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 258 (466)
T COG2319 180 IKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLAS 258 (466)
T ss_pred eEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEE
Confidence 578999987777777 6889999999999998 5555589999999988866653 366666664 3389999988889
Q ss_pred eCCCCeEEEeeCCCCce-E-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGAS-I-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~-~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.++.+++|+...... . ....|...+.++.|+|++..+++++.|+.+.+||+.
T Consensus 259 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~ 314 (466)
T COG2319 259 GSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLE 314 (466)
T ss_pred ecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcC
Confidence 99999999999987664 3 335678999999999988888888888889999764
No 199
>KOG0307|consensus
Probab=99.57 E-value=3.3e-14 Score=95.90 Aligned_cols=129 Identities=16% Similarity=0.243 Sum_probs=103.3
Q ss_pred EEEeCCCCceeeee-cCC--CCeEEEEECCCCC-EEEEEeCC---CcEEEEeCCCCC--eEEeeccccceEEEEEccCC-
Q psy15612 2 YLQSVSPGRQLQQH-DFS--SQIFSLGYCPSGE-WLAVGMEN---SNVEVLHALKPD--KYQLHLHESCVLSLRFAACG- 71 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~--~~v~~~~~~~~~~-~l~~~~~~---~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~- 71 (131)
-|||++..+.+-.+ .+. ..+..++|+|+.. .+++++.| ..|.+||++... .+.+.+|...|.++.|++.+
T Consensus 187 ~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~ 266 (1049)
T KOG0307|consen 187 VIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDP 266 (1049)
T ss_pred eeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCc
Confidence 58999988777666 222 4588999999855 45555544 348899997554 45668999999999999965
Q ss_pred CEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 72 KWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 72 ~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
.++++++.|+.+.+|+..+++.+ .+...+..+..+.|.|... .++.++-||+|.|+.+.
T Consensus 267 ~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~ 327 (1049)
T KOG0307|consen 267 RLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQ 327 (1049)
T ss_pred hhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeee
Confidence 78899999999999999999999 4555778899999999765 77788889999999874
No 200
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.56 E-value=1.6e-12 Score=83.40 Aligned_cols=127 Identities=12% Similarity=-0.005 Sum_probs=88.7
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE-e
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS-T 77 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~ 77 (131)
.++|...++......+...+....|+|||+.|+..+.+ ..|.++++.+++...+....+......|+|||+.++. .
T Consensus 182 ~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~ 261 (430)
T PRK00178 182 QRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVL 261 (430)
T ss_pred EEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEE
Confidence 34465544443344667788999999999998876543 3688899988877666555555667899999998764 4
Q ss_pred CCCC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCc--EEEEE
Q psy15612 78 GKDN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKK--ATVYE 128 (131)
Q Consensus 78 ~~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~--i~vw~ 128 (131)
+.++ .|+++|+.+++...+..+........|+|+|+.++..+. ++. |.++|
T Consensus 262 ~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d 317 (430)
T PRK00178 262 SKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVN 317 (430)
T ss_pred ccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEE
Confidence 4444 588889988876655555556677899999998765543 444 44444
No 201
>KOG0974|consensus
Probab=99.56 E-value=1.5e-13 Score=92.15 Aligned_cols=127 Identities=12% Similarity=0.183 Sum_probs=105.6
Q ss_pred CEEEeCC-CCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVS-PGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|.+|+.. +.......+|.+.+.++.++-||+++++.+.|.++++|++.+.+. ....+|+..+..+.|.|+ .++++
T Consensus 157 iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~ 234 (967)
T KOG0974|consen 157 IIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITV 234 (967)
T ss_pred EEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEe
Confidence 3567665 333444559999999999999999999999999999999998885 356789999999999987 89999
Q ss_pred CCCCeEEEeeCCCCceEEecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 78 GKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+.|.+.++|+....+.....+ ....+..++..++....++++.|+.+++|++
T Consensus 235 gedctcrvW~~~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l 287 (967)
T KOG0974|consen 235 GEDCTCRVWGVNGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDL 287 (967)
T ss_pred ccceEEEEEecccceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhh
Confidence 999999999766444433333 4577899999999889999999999999986
No 202
>KOG1188|consensus
Probab=99.56 E-value=2.3e-13 Score=81.89 Aligned_cols=130 Identities=18% Similarity=0.172 Sum_probs=98.4
Q ss_pred CEEEeCCCCceeeee---cCC-CCeEEEEECCCCCEEEEEeC----CCcEEEEeCCCCCe---EEeeccccceEEEEEcc
Q psy15612 1 MYLQSVSPGRQLQQH---DFS-SQIFSLGYCPSGEWLAVGME----NSNVEVLHALKPDK---YQLHLHESCVLSLRFAA 69 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~-~~v~~~~~~~~~~~l~~~~~----~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~ 69 (131)
||+||+++......+ +++ .+..+++.+-.++.+++|.. +-.|.+||.+..+. .-...|...|.+++|+|
T Consensus 96 Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP 175 (376)
T KOG1188|consen 96 VRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHP 175 (376)
T ss_pred EEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecC
Confidence 689999976655444 333 35667776667788888743 56799999987664 22467999999999999
Q ss_pred C-CCEEEEeCCCCeEEEeeCCCCceE----EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612 70 C-GKWFVSTGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 70 ~-~~~~~~~~~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~ 130 (131)
. .+.+++|+-||.+.+||+...... ....+...|.++.|..++ +.+.+.+...+..+|++.
T Consensus 176 ~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele 242 (376)
T KOG1188|consen 176 SDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELE 242 (376)
T ss_pred CCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEcc
Confidence 5 668899999999999999754332 334577889999998776 357777888899999874
No 203
>KOG1272|consensus
Probab=99.55 E-value=1.9e-14 Score=89.59 Aligned_cols=125 Identities=14% Similarity=0.193 Sum_probs=99.3
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
+.-|+.+|+.+..+ ...+.+..|+-+|-...+-+|..+|+|.+|...+.+. .++.+|.+.|.++++.++|+++++++.
T Consensus 234 ~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~ 313 (545)
T KOG1272|consen 234 KYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGL 313 (545)
T ss_pred EEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeeccc
Confidence 34578888888777 5667888999999999999999999999999988774 667899999999999999999999999
Q ss_pred CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
|+.++|||+++-..+.....+-....+++|..|-+ + .+....+.+|.
T Consensus 314 Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~SqkglL-A-~~~G~~v~iw~ 360 (545)
T KOG1272|consen 314 DRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKGLL-A-LSYGDHVQIWK 360 (545)
T ss_pred ccceeEeeeccccccceeecCCCccccccccccce-e-eecCCeeeeeh
Confidence 99999999998776522222455567788766543 3 33334688873
No 204
>KOG4497|consensus
Probab=99.55 E-value=6.6e-13 Score=80.03 Aligned_cols=128 Identities=13% Similarity=0.209 Sum_probs=91.8
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEE-EeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAV-GMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~-~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|.+|++.+.+--..+ ..+.++.+..|+|||+.++. ...+..+.+|.+.+.....++..+..+..++|+|||++.+..+
T Consensus 73 vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~s 152 (447)
T KOG4497|consen 73 VQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILS 152 (447)
T ss_pred EEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeee
Confidence 568998887777666 56678999999999976655 5557889999999888766666666778999999999988776
Q ss_pred CCCe------------------------------------EEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCC
Q psy15612 79 KDNL------------------------------------LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDK 122 (131)
Q Consensus 79 ~~~~------------------------------------i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 122 (131)
+... +.+||.--...+..-..+-.+..++|+|.+++++.|+.|+
T Consensus 153 RrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~ 232 (447)
T KOG4497|consen 153 RRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQ 232 (447)
T ss_pred cccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccch
Confidence 5321 2222211000001111235578899999999999999999
Q ss_pred cEEEEE
Q psy15612 123 KATVYE 128 (131)
Q Consensus 123 ~i~vw~ 128 (131)
.+++.|
T Consensus 233 ~lrvln 238 (447)
T KOG4497|consen 233 MLRVLN 238 (447)
T ss_pred hhhhhc
Confidence 888754
No 205
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.54 E-value=6.4e-13 Score=76.61 Aligned_cols=90 Identities=18% Similarity=0.365 Sum_probs=68.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|.+||++ ++.+..++ ...+..+.|+|+|+++++++. .|.+.+||..+.+......|. .+..++|+|||++++++
T Consensus 85 v~lyd~~-~~~i~~~~-~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~-~~t~~~WsPdGr~~~ta 161 (194)
T PF08662_consen 85 VTLYDVK-GKKIFSFG-TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHS-DATDVEWSPDGRYLATA 161 (194)
T ss_pred cEEEcCc-ccEeEeec-CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccC-cEEEEEEcCCCCEEEEE
Confidence 5788986 66665664 456789999999999998864 356999999966654333333 47899999999999987
Q ss_pred CC------CCeEEEeeCCCCceE
Q psy15612 78 GK------DNLLNAWRTPYGASI 94 (131)
Q Consensus 78 ~~------~~~i~~w~~~~~~~~ 94 (131)
.. |+.++||+.. |+.+
T Consensus 162 ~t~~r~~~dng~~Iw~~~-G~~l 183 (194)
T PF08662_consen 162 TTSPRLRVDNGFKIWSFQ-GRLL 183 (194)
T ss_pred EeccceeccccEEEEEec-CeEe
Confidence 54 6789999985 6655
No 206
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.54 E-value=2e-12 Score=82.54 Aligned_cols=128 Identities=13% Similarity=0.022 Sum_probs=89.3
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE-e
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS-T 77 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~ 77 (131)
.++|....+......+...+....|+|+|+.++.+... ..+.+|++.+++...+..+......++|+|||+.++. .
T Consensus 173 ~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~ 252 (417)
T TIGR02800 173 QVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSL 252 (417)
T ss_pred EEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEE
Confidence 45565544444444666678999999999999877543 4799999998876666556666778999999997764 4
Q ss_pred CCC--CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CC--cEEEEEe
Q psy15612 78 GKD--NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DK--KATVYEV 129 (131)
Q Consensus 78 ~~~--~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~vw~~ 129 (131)
+.+ ..+++|++.+++...+..+........|+|+|+.++..+. ++ .|.++|+
T Consensus 253 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~ 309 (417)
T TIGR02800 253 SKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDA 309 (417)
T ss_pred CCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEEC
Confidence 443 3588899988766644444455567789999998876543 34 3555553
No 207
>KOG2110|consensus
Probab=99.54 E-value=3e-12 Score=77.84 Aligned_cols=125 Identities=11% Similarity=0.115 Sum_probs=92.0
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEe---eccccceEEEEEccCCCEEEEe
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQL---HLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~---~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
++.+++.+..+..+.....|.++.++. +.|+++-.+ .+.+||++.-+. .++ ..+...+..+..++.+.+++..
T Consensus 71 kv~~~Kk~~~ICe~~fpt~IL~VrmNr--~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp 147 (391)
T KOG2110|consen 71 KVVHFKKKTTICEIFFPTSILAVRMNR--KRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYP 147 (391)
T ss_pred EEEEcccCceEEEEecCCceEEEEEcc--ceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEec
Confidence 455666666666666677888888853 445554444 499999998775 333 2345556666666677788754
Q ss_pred C--CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCc-EEEEEe
Q psy15612 78 G--KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKK-ATVYEV 129 (131)
Q Consensus 78 ~--~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~vw~~ 129 (131)
+ ..|.+.+||..+-+.. ....|.+.+.+++|+++|.+++++++.|+ |+|+.+
T Consensus 148 ~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v 203 (391)
T KOG2110|consen 148 GSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSV 203 (391)
T ss_pred CCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEc
Confidence 3 2578999999988877 67789999999999999999999999886 677654
No 208
>KOG0321|consensus
Probab=99.54 E-value=9.2e-14 Score=89.36 Aligned_cols=109 Identities=17% Similarity=0.252 Sum_probs=91.3
Q ss_pred EEEEECC---CCCEEEEEeCCCcEEEEeCCCCCe-------EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612 22 FSLGYCP---SGEWLAVGMENSNVEVLHALKPDK-------YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG 91 (131)
Q Consensus 22 ~~~~~~~---~~~~l~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 91 (131)
.+..|++ ....|+.+.++|.|.++|.+.... .....|...|.++.|.|....|++++.|.++++||+.++
T Consensus 53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s 132 (720)
T KOG0321|consen 53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTS 132 (720)
T ss_pred ccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccc
Confidence 3456655 255788999999999999875432 334679999999999996678899999999999999988
Q ss_pred ceE---EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612 92 ASI---FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 92 ~~~---~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~ 130 (131)
++. ...+|.+.+.+++|.|.. ..|++|+.||.+.|||++
T Consensus 133 ~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R 175 (720)
T KOG0321|consen 133 RLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCR 175 (720)
T ss_pred eeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEe
Confidence 887 478999999999999965 467899999999999987
No 209
>KOG1538|consensus
Probab=99.53 E-value=3.8e-14 Score=92.14 Aligned_cols=125 Identities=16% Similarity=0.311 Sum_probs=100.4
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
+.+||...|..++++ +|...|++++|+.+|+.+++|+.|..|.+|...-.-..+ -.|...|.|+.|+|-...+++++-
T Consensus 35 lliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~Lk-YSH~D~IQCMsFNP~~h~LasCsL 113 (1081)
T KOG1538|consen 35 LLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILK-YSHNDAIQCMSFNPITHQLASCSL 113 (1081)
T ss_pred EEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceee-eccCCeeeEeecCchHHHhhhcch
Confidence 468999999999988 999999999999999999999999999999875333222 357888999999998888887764
Q ss_pred CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
. ..-+|........ ......++.+.+|..||++++.|-.+|+|.+-+
T Consensus 114 s-dFglWS~~qK~V~-K~kss~R~~~CsWtnDGqylalG~~nGTIsiRN 160 (1081)
T KOG1538|consen 114 S-DFGLWSPEQKSVS-KHKSSSRIICCSWTNDGQYLALGMFNGTISIRN 160 (1081)
T ss_pred h-hccccChhhhhHH-hhhhheeEEEeeecCCCcEEEEeccCceEEeec
Confidence 3 3567776543322 223457788999999999999999999988754
No 210
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.53 E-value=8e-12 Score=77.64 Aligned_cols=130 Identities=9% Similarity=0.052 Sum_probs=89.3
Q ss_pred CEEEeCC-CCce--eeeecCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCC-e---EEeeccccceEEEEEccCCC
Q psy15612 1 MYLQSVS-PGRQ--LQQHDFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPD-K---YQLHLHESCVLSLRFAACGK 72 (131)
Q Consensus 1 i~iwd~~-~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~-~---~~~~~~~~~v~~~~~~~~~~ 72 (131)
|..|++. +++. +......+....+.++|+++.+++++. ++.+.+|++.... . .....+...+..++++|+++
T Consensus 59 i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~ 138 (330)
T PRK11028 59 VLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNR 138 (330)
T ss_pred EEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCC
Confidence 3567775 3332 222234456778999999998887754 7889999986422 1 11112334567889999999
Q ss_pred EEEEe-CCCCeEEEeeCCCCceE-------EecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEee
Q psy15612 73 WFVST-GKDNLLNAWRTPYGASI-------FQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEVI 130 (131)
Q Consensus 73 ~~~~~-~~~~~i~~w~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~~ 130 (131)
+++++ ..++.|.+||+.+...+ .....+..+..+.|+|++++++++.. +++|.+|++.
T Consensus 139 ~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~ 205 (330)
T PRK11028 139 TLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLK 205 (330)
T ss_pred EEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEe
Confidence 88655 45689999999763222 11223556788999999999987766 8899999974
No 211
>KOG0649|consensus
Probab=99.52 E-value=8.9e-13 Score=76.55 Aligned_cols=109 Identities=13% Similarity=0.151 Sum_probs=85.9
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEec
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS 97 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 97 (131)
..|++|-..|..+.++.++.|+.++.||+++++. +.+.+|...+.++.-......+++|+.||++++||.+++++....
T Consensus 115 PeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~i 194 (325)
T KOG0649|consen 115 PEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMI 194 (325)
T ss_pred CccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEe
Confidence 3589999999988888888999999999999997 678999999999988666677889999999999999999987221
Q ss_pred C-----------CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 98 K-----------ESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 98 ~-----------~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+ .+..|-+++. +..++++|+. ..+.+|.++
T Consensus 195 e~yk~~~~lRp~~g~wigala~--~edWlvCGgG-p~lslwhLr 235 (325)
T KOG0649|consen 195 EPYKNPNLLRPDWGKWIGALAV--NEDWLVCGGG-PKLSLWHLR 235 (325)
T ss_pred ccccChhhcCcccCceeEEEec--cCceEEecCC-CceeEEecc
Confidence 1 1223444443 5667777654 578899876
No 212
>KOG4328|consensus
Probab=99.52 E-value=1.6e-13 Score=85.16 Aligned_cols=112 Identities=16% Similarity=0.196 Sum_probs=92.2
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCC-CEEEEeCCCCeEEEeeCCCC--c
Q psy15612 18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACG-KWFVSTGKDNLLNAWRTPYG--A 92 (131)
Q Consensus 18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~~~--~ 92 (131)
......+.|+.+.+.++.+..-|...+||+++... ..+.-|+..|..++++|.. .++++++.|++.+|||++.- +
T Consensus 279 ~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K 358 (498)
T KOG4328|consen 279 NIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGK 358 (498)
T ss_pred ceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCC
Confidence 34567888888888888888888999999987653 4455677799999999964 46889999999999998742 2
Q ss_pred e---EEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 93 S---IFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 93 ~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
. +....|...|.+..|||.+-.+++.+.|..|+|||.
T Consensus 359 ~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~ds 398 (498)
T KOG4328|consen 359 ASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDS 398 (498)
T ss_pred CCcceecccccceeeeeEEcCCCCceEeeccCCceEEeec
Confidence 2 366789999999999998777999999999999996
No 213
>KOG2139|consensus
Probab=99.52 E-value=2.3e-12 Score=78.48 Aligned_cols=126 Identities=16% Similarity=0.146 Sum_probs=93.9
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCC-e--------------EEeeccccce
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPD-K--------------YQLHLHESCV 62 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~-~--------------~~~~~~~~~v 62 (131)
||+||-.. ++...+ ..+..|.+++|-|.+. .++.|+..| +.+|.....- . .+-.+| ..|
T Consensus 122 Vriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pV 198 (445)
T KOG2139|consen 122 VRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPV 198 (445)
T ss_pred EEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccccccccccccchhheeCCCC-cee
Confidence 57787665 444444 3456799999999644 566776655 9999875221 0 111223 578
Q ss_pred EEEEEccCCCEEEEeCC-CCeEEEeeCCCCceEEec-CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 63 LSLRFAACGKWFVSTGK-DNLLNAWRTPYGASIFQS-KESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 63 ~~~~~~~~~~~~~~~~~-~~~i~~w~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+++|++||..+++++. +..|.+||..++....+. ...+.+.-+.||||+.++..+.-|+..++|+.
T Consensus 199 tsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e 267 (445)
T KOG2139|consen 199 TSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQE 267 (445)
T ss_pred eEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehh
Confidence 99999999999998876 456999999999887443 45677889999999999999999999999954
No 214
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.52 E-value=4e-12 Score=81.84 Aligned_cols=125 Identities=14% Similarity=0.080 Sum_probs=84.5
Q ss_pred EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE-eC
Q psy15612 3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS-TG 78 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~ 78 (131)
+.|....+..........+....|+|||+.|+..+.+ ..|.++|+.+++...+...........|+|||+.++. .+
T Consensus 202 i~d~dG~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~ 281 (448)
T PRK04792 202 IADYDGYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLS 281 (448)
T ss_pred EEeCCCCCceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEe
Confidence 3454433333333556678899999999998876432 3588889988776555444444457899999998765 44
Q ss_pred CCC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEE
Q psy15612 79 KDN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVY 127 (131)
Q Consensus 79 ~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw 127 (131)
.++ .|+++|+.+++...+..+.......+|+|+|+.++..+. ++...+|
T Consensus 282 ~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy 333 (448)
T PRK04792 282 KDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIY 333 (448)
T ss_pred CCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEE
Confidence 455 477889888776655445556678899999998866543 4444444
No 215
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.51 E-value=1.1e-11 Score=76.94 Aligned_cols=130 Identities=14% Similarity=0.140 Sum_probs=90.5
Q ss_pred CEEEeCCC-Cc--eeeeecCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCC-CCCeEEe--eccccceEEEEEccCCCE
Q psy15612 1 MYLQSVSP-GR--QLQQHDFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHAL-KPDKYQL--HLHESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~-~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~-~~~~~~~--~~~~~~v~~~~~~~~~~~ 73 (131)
|++||+.+ ++ .+..+...+....++++|+++.|++++ .++.+.+|++. .+..... ......+..+.++|+++.
T Consensus 14 I~~~~~~~~g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~ 93 (330)
T PRK11028 14 IHVWNLNHEGALTLLQVVDVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRF 93 (330)
T ss_pred EEEEEECCCCceeeeeEEecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCE
Confidence 57899864 43 344455556788899999999887664 47789999986 3333221 123345678999999998
Q ss_pred EEEeCC-CCeEEEeeCCC-Cce---EEecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEee
Q psy15612 74 FVSTGK-DNLLNAWRTPY-GAS---IFQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~-~~~i~~w~~~~-~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~ 130 (131)
+++++. ++.+.+|++.+ +.. .........+..++++|+++++++++ .++.|.+||+.
T Consensus 94 l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~ 156 (330)
T PRK11028 94 LFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLS 156 (330)
T ss_pred EEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEEC
Confidence 887754 78899999863 322 12222334577889999999886544 56899999973
No 216
>KOG3914|consensus
Probab=99.51 E-value=8.8e-13 Score=80.69 Aligned_cols=110 Identities=16% Similarity=0.251 Sum_probs=83.4
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEE---EEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--
Q psy15612 20 QIFSLGYCPSGEWLAVGMENSNVE---VLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-- 94 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~~v~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-- 94 (131)
...++.+..+......+...|.+. +|....+....+.+|-+.+.+++++||++.++++.+|..|++-........
T Consensus 109 ~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Ies 188 (390)
T KOG3914|consen 109 RPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIES 188 (390)
T ss_pred CcceeeeeeccceEEEEeecCCceeeeeecccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhh
Confidence 344455544455444444444444 444444556677889999999999999999999999999999887655555
Q ss_pred EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 95 FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+..+|...|..++.-++ ..|++++.|+++++||++
T Consensus 189 fclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~ 223 (390)
T KOG3914|consen 189 FCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDIT 223 (390)
T ss_pred hccccHhheeeeeeccC-ceeeecCCCCcEEEEecc
Confidence 78899999999998766 448899999999999985
No 217
>KOG4227|consensus
Probab=99.51 E-value=1.4e-12 Score=80.41 Aligned_cols=130 Identities=11% Similarity=0.106 Sum_probs=104.7
Q ss_pred CEEEeCC------CCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccc---cceEEEEEcc
Q psy15612 1 MYLQSVS------PGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHE---SCVLSLRFAA 69 (131)
Q Consensus 1 i~iwd~~------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~---~~v~~~~~~~ 69 (131)
+++|+++ +.+++... .|...|.+++|....+++++|..+++|...|+++.+...+..|. +.|+.+..+|
T Consensus 80 ~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P 159 (609)
T KOG4227|consen 80 GRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHP 159 (609)
T ss_pred eeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCC
Confidence 4688875 34666665 46678999999999999999999999999999988865554444 4899999999
Q ss_pred CCCEEEEeCCCCeEEEeeCCCCceE----EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612 70 CGKWFVSTGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 70 ~~~~~~~~~~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~ 130 (131)
-.+.+++.+.++.+.+||.+..... .....+.....+.|+|. .+++++.+..+-+.+||.+
T Consensus 160 ~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R 225 (609)
T KOG4227|consen 160 TDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRR 225 (609)
T ss_pred CCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeec
Confidence 9999999999999999999866522 33345677788999996 4567788888889999986
No 218
>KOG0974|consensus
Probab=99.50 E-value=1.7e-12 Score=87.23 Aligned_cols=126 Identities=17% Similarity=0.265 Sum_probs=101.7
Q ss_pred EEEeCCCCceeeeecCCCCe-----EEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEE
Q psy15612 2 YLQSVSPGRQLQQHDFSSQI-----FSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFV 75 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~ 75 (131)
-+||...+.......+.+.. .-+..+++.-++++|+--+.+.+|+....+. ..+.+|++.+..+.++.||++++
T Consensus 112 ~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~ 191 (967)
T KOG0974|consen 112 LIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIA 191 (967)
T ss_pred EEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEE
Confidence 35565555544444444432 2333467777889999999999999874443 45789999999999999999999
Q ss_pred EeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 76 STGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+.|.|+.+++|++.+++.. ...+|+.++..++|.|+ .+++++.|-+.++|+.
T Consensus 192 s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~ 245 (967)
T KOG0974|consen 192 SVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGV 245 (967)
T ss_pred EEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEec
Confidence 9999999999999998887 67789999999999998 8999999999999964
No 219
>KOG1517|consensus
Probab=99.50 E-value=2.5e-12 Score=87.30 Aligned_cols=129 Identities=15% Similarity=0.190 Sum_probs=98.3
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCe----EEeeccccc--eEEEEEccCC
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDK----YQLHLHESC--VLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~--v~~~~~~~~~ 71 (131)
|||||+...++...+ +....+.++.-+- .|..++.|..||.|++||.+.... .....|... |..+.+.+.|
T Consensus 1189 IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G 1268 (1387)
T KOG1517|consen 1189 IRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQG 1268 (1387)
T ss_pred EEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCC
Confidence 689999987777766 4445566665533 478999999999999999986542 334455554 8999998866
Q ss_pred CE-EEEeCCCCeEEEeeCCCCceE-Ee--cC---CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 72 KW-FVSTGKDNLLNAWRTPYGASI-FQ--SK---ESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 72 ~~-~~~~~~~~~i~~w~~~~~~~~-~~--~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
-- +++++.+|.|++||++..... +. .. .++..+++..+++...+++|+. +.++||++.
T Consensus 1269 ~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~ 1333 (1387)
T KOG1517|consen 1269 LGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS 1333 (1387)
T ss_pred CcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC
Confidence 54 999999999999999974322 21 11 2446999999999999999988 899999873
No 220
>KOG0649|consensus
Probab=99.50 E-value=4.6e-12 Score=73.67 Aligned_cols=124 Identities=16% Similarity=0.254 Sum_probs=92.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-ec--c--------ccceEEEEEc
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HL--H--------ESCVLSLRFA 68 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~--~--------~~~v~~~~~~ 68 (131)
++-||+++|+....+ +|.+.+-++.-......+++|++||++++||.++.+..+. .. + ...|.+++-
T Consensus 138 ~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~- 216 (325)
T KOG0649|consen 138 IYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV- 216 (325)
T ss_pred EEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec-
Confidence 467999999999888 9999999999866677889999999999999999885332 11 1 122344444
Q ss_pred cCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 69 ~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+..++++|+ ...+.+|+++..++....+-+..+..+.|- ...+++++..+.+.-|.+
T Consensus 217 -~edWlvCGg-Gp~lslwhLrsse~t~vfpipa~v~~v~F~--~d~vl~~G~g~~v~~~~l 273 (325)
T KOG0649|consen 217 -NEDWLVCGG-GPKLSLWHLRSSESTCVFPIPARVHLVDFV--DDCVLIGGEGNHVQSYTL 273 (325)
T ss_pred -cCceEEecC-CCceeEEeccCCCceEEEecccceeEeeee--cceEEEeccccceeeeee
Confidence 445665554 667899999999888777788888888885 344666666666766654
No 221
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=1.1e-11 Score=79.64 Aligned_cols=129 Identities=16% Similarity=0.139 Sum_probs=87.7
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE-EeCCC--cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV-GMENS--NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~--~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|.+||+.+++........+......|+|+|+.|+. ...++ .+.++|+.++....+..+........|+|||+.++..
T Consensus 225 l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~ 304 (430)
T PRK00178 225 IFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFT 304 (430)
T ss_pred EEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEE
Confidence 45778888776554444455667999999998874 33444 5888899888876666666566678899999987765
Q ss_pred CC-C--CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CC--cEEEEEe
Q psy15612 78 GK-D--NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DK--KATVYEV 129 (131)
Q Consensus 78 ~~-~--~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~vw~~ 129 (131)
+. + ..++++++.+++...............|+|+|++++..+. ++ .+.++|+
T Consensus 305 s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl 362 (430)
T PRK00178 305 SDRGGKPQIYKVNVNGGRAERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDL 362 (430)
T ss_pred ECCCCCceEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEEC
Confidence 43 3 3577778877775533222233446789999999876654 33 3566664
No 222
>KOG0290|consensus
Probab=99.49 E-value=1.5e-12 Score=77.23 Aligned_cols=115 Identities=16% Similarity=0.245 Sum_probs=91.8
Q ss_pred cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEEccCCC-EEEEeCCCCeEEEeeCC
Q psy15612 16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRFAACGK-WFVSTGKDNLLNAWRTP 89 (131)
Q Consensus 16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~ 89 (131)
.+..++.+..|+. +.+++.+.+-|-+..+||++++. ..++..|..+|++++|...+. .|++.+.||.+++||++
T Consensus 148 ~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR 227 (364)
T KOG0290|consen 148 EFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLR 227 (364)
T ss_pred ccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEec
Confidence 4667899999987 56788888999999999998863 356789999999999998654 68899999999999999
Q ss_pred CCceE---EecCC-CCCeEEEEECCC-CCEEEEecCC-CcEEEEEee
Q psy15612 90 YGASI---FQSKE-SSSVLSCDISAD-DKYIVTGSGD-KKATVYEVI 130 (131)
Q Consensus 90 ~~~~~---~~~~~-~~~v~~~~~~~~-~~~l~~~~~d-~~i~vw~~~ 130 (131)
..+.- +..+. ..+...++|+++ -+++++-..| ..|.+.|+|
T Consensus 228 ~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR 274 (364)
T KOG0290|consen 228 SLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIR 274 (364)
T ss_pred ccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEec
Confidence 76654 33333 577889999974 5677765554 579999987
No 223
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.47 E-value=2.1e-11 Score=78.59 Aligned_cols=127 Identities=13% Similarity=0.150 Sum_probs=85.0
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE-EeCCCc--EEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV-GMENSN--VEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~--v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|+++|+.+++........+......|+|||+.|+. ...++. |.++|+.+++...+..+........|+|||+.++..
T Consensus 244 L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~ 323 (448)
T PRK04792 244 IFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFT 323 (448)
T ss_pred EEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEE
Confidence 46778887765443333444557899999998865 455554 777888888776666665566788999999988765
Q ss_pred CC-CC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEE
Q psy15612 78 GK-DN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVY 127 (131)
Q Consensus 78 ~~-~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw 127 (131)
+. ++ .++++|+.+++...+..........+|+|+|++++..+. ++...+|
T Consensus 324 s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~ 377 (448)
T PRK04792 324 SERGGKPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIA 377 (448)
T ss_pred ECCCCCceEEEEECCCCCEEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEE
Confidence 43 33 466778877776533222333445789999998876554 4444444
No 224
>KOG2139|consensus
Probab=99.46 E-value=8e-12 Score=76.18 Aligned_cols=110 Identities=13% Similarity=0.136 Sum_probs=82.4
Q ss_pred CCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc-eEE
Q psy15612 19 SQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA-SIF 95 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~-~~~ 95 (131)
..|.+|+|++||..+++++. +..+.+||..++....+. ...+.+.-++|||||.++..+..|+..++|+..... ...
T Consensus 196 ~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~er 275 (445)
T KOG2139|consen 196 NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKER 275 (445)
T ss_pred ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecc
Confidence 57999999999999988765 567999999988865444 445678899999999999999999999999654322 222
Q ss_pred ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 96 QSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
..-..+.|...+|+|+|+++..++. +.-++|.+
T Consensus 276 w~lgsgrvqtacWspcGsfLLf~~s-gsp~lysl 308 (445)
T KOG2139|consen 276 WILGSGRVQTACWSPCGSFLLFACS-GSPRLYSL 308 (445)
T ss_pred eeccCCceeeeeecCCCCEEEEEEc-CCceEEEE
Confidence 2223448999999999998765443 23344444
No 225
>KOG2315|consensus
Probab=99.46 E-value=1.4e-11 Score=78.45 Aligned_cols=125 Identities=18% Similarity=0.273 Sum_probs=92.4
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE--EeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV--GMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
++.+++...+...+...++|.++.|+|+++-++. |-.-..+.+||++...+..+. +++-.++-|+|.|++++.++.
T Consensus 254 yll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~v~df~--egpRN~~~fnp~g~ii~lAGF 331 (566)
T KOG2315|consen 254 YLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKPVFDFP--EGPRNTAFFNPHGNIILLAGF 331 (566)
T ss_pred EEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCEeEeCC--CCCccceEECCCCCEEEEeec
Confidence 4556664445555677899999999999987654 555677999999877665543 344568999999999998877
Q ss_pred C---CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC------CCcEEEEEe
Q psy15612 80 D---NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG------DKKATVYEV 129 (131)
Q Consensus 80 ~---~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~vw~~ 129 (131)
+ |.|-+||..+.+.+..... ...+-..|+|+|++++++.. |..++||+.
T Consensus 332 GNL~G~mEvwDv~n~K~i~~~~a-~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy 389 (566)
T KOG2315|consen 332 GNLPGDMEVWDVPNRKLIAKFKA-ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY 389 (566)
T ss_pred CCCCCceEEEeccchhhcccccc-CCceEEEEcCCCcEEEEEeccccEEecCCeEEEEe
Confidence 5 5799999998766632222 23345889999999987653 678999975
No 226
>KOG1524|consensus
Probab=99.46 E-value=1.7e-12 Score=82.63 Aligned_cols=122 Identities=16% Similarity=0.241 Sum_probs=89.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC-CeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP-DKYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++|. ++|-...++ .....|++++|.|+...++.+.. +.+.+-.+... +..+-..|.+-|.++.|++....+++++
T Consensus 128 iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgG 205 (737)
T KOG1524|consen 128 IKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQG-GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGG 205 (737)
T ss_pred EEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEecC-CeEEEeecccccceeEEeccCcEEEEeecCccccceeecC
Confidence 46777 446555555 66788999999999887766543 45777666543 3567789999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-Eec-----------------------------CCCCCeEEEEECCCCCEEEEecCCCcEE
Q psy15612 79 KDNLLNAWRTPYGASI-FQS-----------------------------KESSSVLSCDISADDKYIVTGSGDKKAT 125 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~-----------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 125 (131)
.|-..++||.. |+.+ ... ...+.|..++||+||..++.|...|.+.
T Consensus 206 ED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd~~~~v~S~nt~R~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~ 281 (737)
T KOG1524|consen 206 EDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPEKDYLLWSYNTARFSSPRVGSIFNLSWSADGTQATCGTSTGQLI 281 (737)
T ss_pred CceeEEeeccc-CcccccCChhccceeeeeeccccceeeeeeeeeeecCCCccceEEEEEcCCCceeeccccCceEE
Confidence 99999999965 3222 111 2345667777777777777776666544
No 227
>KOG1538|consensus
Probab=99.44 E-value=7.7e-13 Score=86.26 Aligned_cols=99 Identities=17% Similarity=0.253 Sum_probs=84.2
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC
Q psy15612 20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK 98 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~ 98 (131)
.|..++|-|||..|+.+..+ .+.+||...+. ...+.+|+..|++++|+.||+.+++|+.|..+.+|+..- +-+..-.
T Consensus 14 ci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl-EG~LkYS 91 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL-EGILKYS 91 (1081)
T ss_pred chheeEECCCCceEEEecCC-EEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccc-cceeeec
Confidence 78999999999998887554 69999998776 478899999999999999999999999999999998652 2234456
Q ss_pred CCCCeEEEEECCCCCEEEEecC
Q psy15612 99 ESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 99 ~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
|++.|.|+.|+|....+++++-
T Consensus 92 H~D~IQCMsFNP~~h~LasCsL 113 (1081)
T KOG1538|consen 92 HNDAIQCMSFNPITHQLASCSL 113 (1081)
T ss_pred cCCeeeEeecCchHHHhhhcch
Confidence 8999999999998888877654
No 228
>KOG1240|consensus
Probab=99.43 E-value=2e-11 Score=83.90 Aligned_cols=123 Identities=16% Similarity=0.214 Sum_probs=93.0
Q ss_pred Cceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe--------EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 9 GRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK--------YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 9 ~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|..+..+ .|...+..++.++. +.++++|+.||+|++|+...-.. .+.......+.++.+.+.+..++.++
T Consensus 1038 G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t 1117 (1431)
T KOG1240|consen 1038 GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVST 1117 (1431)
T ss_pred ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEc
Confidence 4555444 78888888888765 48999999999999999864321 22233466788999999999999999
Q ss_pred CCCeEEEeeCCC--CceE----Ee--------------------------------------------------cCCCCC
Q psy15612 79 KDNLLNAWRTPY--GASI----FQ--------------------------------------------------SKESSS 102 (131)
Q Consensus 79 ~~~~i~~w~~~~--~~~~----~~--------------------------------------------------~~~~~~ 102 (131)
.||.|.+.++.. .+.. .. ....+.
T Consensus 1118 ~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~ 1197 (1431)
T KOG1240|consen 1118 KDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGL 1197 (1431)
T ss_pred CCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccc
Confidence 999998887542 1100 00 012467
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612 103 VLSCDISADDKYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 103 v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 131 (131)
|++++.+|.++++++|...|.+.+||+|+
T Consensus 1198 vTSi~idp~~~WlviGts~G~l~lWDLRF 1226 (1431)
T KOG1240|consen 1198 VTSIVIDPWCNWLVIGTSRGQLVLWDLRF 1226 (1431)
T ss_pred eeEEEecCCceEEEEecCCceEEEEEeec
Confidence 89999999999999999999999999986
No 229
>KOG2111|consensus
Probab=99.42 E-value=2.2e-10 Score=68.82 Aligned_cols=89 Identities=9% Similarity=0.202 Sum_probs=71.5
Q ss_pred EEEeCCCCce---eeeecCCCCeEEEEECCCCCEEEEEeCCCc-EEEEeCCCCCe-EEe--eccccceEEEEEccCCCEE
Q psy15612 2 YLQSVSPGRQ---LQQHDFSSQIFSLGYCPSGEWLAVGMENSN-VEVLHALKPDK-YQL--HLHESCVLSLRFAACGKWF 74 (131)
Q Consensus 2 ~iwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-v~~~~~~~~~~-~~~--~~~~~~v~~~~~~~~~~~~ 74 (131)
+|-|+...+. .....|...|.+++++-+|..+|+++..|+ |++||..++.. .++ ......+++++|||+.+++
T Consensus 162 Qi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~L 241 (346)
T KOG2111|consen 162 QIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWL 241 (346)
T ss_pred EEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEE
Confidence 4455543333 222389999999999999999999999887 78999998875 333 2356789999999999999
Q ss_pred EEeCCCCeEEEeeCCC
Q psy15612 75 VSTGKDNLLNAWRTPY 90 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~ 90 (131)
+++|..+++.+|.++.
T Consensus 242 avsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 242 AVSSDKGTLHIFSLRD 257 (346)
T ss_pred EEEcCCCeEEEEEeec
Confidence 9999999999998764
No 230
>KOG2321|consensus
Probab=99.40 E-value=8.8e-12 Score=79.87 Aligned_cols=128 Identities=14% Similarity=0.193 Sum_probs=100.4
Q ss_pred CEEEeCCCCceeeeec-CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EE------eecccc-----ceEEEEE
Q psy15612 1 MYLQSVSPGRQLQQHD-FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQ------LHLHES-----CVLSLRF 67 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~------~~~~~~-----~v~~~~~ 67 (131)
|+-+++++|+-+..+. ..+.++++..++-..+|++|+.+|.|..||.+.... .. +..+++ .|..+.|
T Consensus 157 vYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F 236 (703)
T KOG2321|consen 157 VYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKF 236 (703)
T ss_pred eEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEe
Confidence 3556788888888774 447899999999999999999999999999987652 22 223333 4899999
Q ss_pred ccCCCEEEEeCCCCeEEEeeCCCCceEEecCC--CCCeEEEEECCC--CCEEEEecCCCcEEEEEe
Q psy15612 68 AACGKWFVSTGKDNLLNAWRTPYGASIFQSKE--SSSVLSCDISAD--DKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~--~~~v~~~~~~~~--~~~l~~~~~d~~i~vw~~ 129 (131)
+.+|-.+++|...|.+.+||+++.+++....| .-+|..+.|.+. ++.+++. ....+++||-
T Consensus 237 ~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~ 301 (703)
T KOG2321|consen 237 RDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDE 301 (703)
T ss_pred cCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEec-chHHhhhccc
Confidence 99999999999999999999999998866555 466788888775 3445554 4567999974
No 231
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.38 E-value=6.7e-10 Score=69.99 Aligned_cols=128 Identities=11% Similarity=0.069 Sum_probs=85.1
Q ss_pred CEEEeCCCCceeeeecCCCC-eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC-
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQ-IFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG- 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~- 78 (131)
|.+.|.++.+.+..+..... ...+.++|||+++++++.|+.+.++|+.+.+.............+++++||++++++.
T Consensus 18 v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~ 97 (369)
T PF02239_consen 18 VAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANY 97 (369)
T ss_dssp EEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEE
T ss_pred EEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEec
Confidence 45789899999888854444 4567899999999999999999999999988643333445678999999999988775
Q ss_pred CCCeEEEeeCCCCceEEecC--------CCCCeEEEEECCCCCEEEEecC-CCcEEEEE
Q psy15612 79 KDNLLNAWRTPYGASIFQSK--------ESSSVLSCDISADDKYIVTGSG-DKKATVYE 128 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~ 128 (131)
..+.+.++|.++.+.+.... ..+++..+-.+|....++..-. .+.+-+-|
T Consensus 98 ~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVd 156 (369)
T PF02239_consen 98 EPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVD 156 (369)
T ss_dssp ETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEE
T ss_pred CCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEE
Confidence 57899999999988772211 3456777877888775554433 35554444
No 232
>KOG0650|consensus
Probab=99.37 E-value=4.6e-12 Score=81.43 Aligned_cols=125 Identities=14% Similarity=0.171 Sum_probs=99.8
Q ss_pred EEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612 3 LQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 3 iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
|.++...+....+ ...+.|.++.|+|...++++++.. .|++||+...++ .++......+..++.+|.|..++.++.|
T Consensus 550 iHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~-~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d 628 (733)
T KOG0650|consen 550 IHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQR-SVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYD 628 (733)
T ss_pred EEecccccccCchhhcCCceeEEEecCCCceEEEEecc-ceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCC
Confidence 4444444433334 455779999999999988888764 699999987664 4455556678999999999999999999
Q ss_pred CeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 81 NLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 81 ~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+.+..+|+.-+... .+.-|...+.+++|++.-.++++++.|+++.|+-
T Consensus 629 ~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfh 678 (733)
T KOG0650|consen 629 KKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFH 678 (733)
T ss_pred CeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEe
Confidence 99999998755443 5667889999999999999999999999998874
No 233
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.35 E-value=2.5e-10 Score=72.25 Aligned_cols=118 Identities=10% Similarity=0.101 Sum_probs=96.7
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCCC
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
-++|.++++.....+.-+.|.++..+|+|+.++.+.....+.+.|+.++..+.+. ...+.|..+.|+|++++++-+--+
T Consensus 385 ~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~ 464 (668)
T COG4946 385 GIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPE 464 (668)
T ss_pred EEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCc
Confidence 4788887776666677788999999999999999988888999999999986664 355789999999999999977554
Q ss_pred C----eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEec
Q psy15612 81 N----LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 81 ~----~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 119 (131)
+ .|+++|+.+++..-.....+.-.+.+|.|++++|...+
T Consensus 465 gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 465 GYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred ceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEEEEEe
Confidence 4 59999999888875555666667889999999886544
No 234
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.33 E-value=4e-10 Score=72.38 Aligned_cols=111 Identities=9% Similarity=0.028 Sum_probs=74.4
Q ss_pred CCeEEEEECCCCCEEEEEe-CCCcEEEE--eCCC--CCeEEeeccccceEEEEEccCCCEEEEeCCC---CeEEEeeCCC
Q psy15612 19 SQIFSLGYCPSGEWLAVGM-ENSNVEVL--HALK--PDKYQLHLHESCVLSLRFAACGKWFVSTGKD---NLLNAWRTPY 90 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~-~~~~v~~~--~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~w~~~~ 90 (131)
+......|+|||+.|+..+ .++...+| ++.. +....+......+....|+|||+.++..+.+ ..|.+||+.+
T Consensus 281 ~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~ 360 (428)
T PRK01029 281 GTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLAT 360 (428)
T ss_pred CCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 3446789999999887665 45544444 4432 2344444444566788999999988866443 4689999998
Q ss_pred CceEEecCCCCCeEEEEECCCCCEEEEec-CC--CcEEEEEe
Q psy15612 91 GASIFQSKESSSVLSCDISADDKYIVTGS-GD--KKATVYEV 129 (131)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d--~~i~vw~~ 129 (131)
++...+......+....|+|+|+.++... .+ ..+.++|+
T Consensus 361 g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl 402 (428)
T PRK01029 361 GRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISL 402 (428)
T ss_pred CCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence 88764444445667899999999876433 22 34666664
No 235
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.33 E-value=3.2e-10 Score=72.79 Aligned_cols=129 Identities=15% Similarity=0.115 Sum_probs=78.7
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC-CC--c--EEEEeCCCC---CeEEeecc-ccceEEEEEccCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME-NS--N--VEVLHALKP---DKYQLHLH-ESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~--~--v~~~~~~~~---~~~~~~~~-~~~v~~~~~~~~~ 71 (131)
|.+.++.+++........+.....+|+|||+.|+.... ++ . +..|++..+ ....+... ........|+|||
T Consensus 213 I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG 292 (428)
T PRK01029 213 IFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDG 292 (428)
T ss_pred EEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCC
Confidence 34557776665554455556667899999998877543 22 2 334666542 33334332 2334578999999
Q ss_pred CEEEEeC-CCCeEEEe--eCCC--CceEEecCCCCCeEEEEECCCCCEEEEecCC---CcEEEEEe
Q psy15612 72 KWFVSTG-KDNLLNAW--RTPY--GASIFQSKESSSVLSCDISADDKYIVTGSGD---KKATVYEV 129 (131)
Q Consensus 72 ~~~~~~~-~~~~i~~w--~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vw~~ 129 (131)
+.|+..+ .++...+| ++.. +....+......+....|+|+|+.++..+.+ ..|.+||+
T Consensus 293 ~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl 358 (428)
T PRK01029 293 TRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDL 358 (428)
T ss_pred CEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEEC
Confidence 9877654 45544444 4432 2223333344566788999999988765442 35778875
No 236
>KOG1587|consensus
Probab=99.32 E-value=2.8e-10 Score=74.40 Aligned_cols=89 Identities=20% Similarity=0.219 Sum_probs=71.3
Q ss_pred CEEEeCCCC-ceeeeecCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-------EEeeccccceEEEEEccCC
Q psy15612 1 MYLQSVSPG-RQLQQHDFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-------YQLHLHESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~ 71 (131)
+.+|+++.. ++...+.....|.++.|+|. ...++.|..+|.|.+||++.... .....|...+..+.|..+.
T Consensus 224 ~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~ 303 (555)
T KOG1587|consen 224 LLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNE 303 (555)
T ss_pred EEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccC
Confidence 468999876 55556688899999999994 66778889999999999986543 2235688899999998754
Q ss_pred CE--EEEeCCCCeEEEeeCC
Q psy15612 72 KW--FVSTGKDNLLNAWRTP 89 (131)
Q Consensus 72 ~~--~~~~~~~~~i~~w~~~ 89 (131)
.- |++++.||.|..|+++
T Consensus 304 ~~~~f~s~ssDG~i~~W~~~ 323 (555)
T KOG1587|consen 304 HNTEFFSLSSDGSICSWDTD 323 (555)
T ss_pred CCCceEEEecCCcEeeeecc
Confidence 44 8899999999999865
No 237
>KOG4547|consensus
Probab=99.31 E-value=4.8e-10 Score=71.84 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=104.3
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
|.+|++..++....+ .|.+.|.++.++.+-..|.+++.|..+..|+...... +.....+..+..+..+|||..+++
T Consensus 82 v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~ 161 (541)
T KOG4547|consen 82 VLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLT 161 (541)
T ss_pred EEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEe
Confidence 356777777776665 6889999999998888999999999999999988775 555667778899999999999988
Q ss_pred eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCC-----CCEEEEe-cCCCcEEEEEe
Q psy15612 77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISAD-----DKYIVTG-SGDKKATVYEV 129 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~-----~~~l~~~-~~d~~i~vw~~ 129 (131)
+++ .|++||+.+++.+ ...+|.+.|.+++|-.. |.++.++ ..++-+.+|-+
T Consensus 162 as~--~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v 219 (541)
T KOG4547|consen 162 ASR--QIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVV 219 (541)
T ss_pred ccc--eEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEE
Confidence 864 6999999999988 88899999999999766 6666554 34566777754
No 238
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.31 E-value=1.4e-09 Score=69.64 Aligned_cols=118 Identities=12% Similarity=0.069 Sum_probs=80.8
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eC--CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-ME--NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~--~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|+++|+.+++........+......|+|||+.++.. +. +..+.++++.++....+..+........|+|||+.++..
T Consensus 215 Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~ 294 (419)
T PRK04043 215 LYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFV 294 (419)
T ss_pred EEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEE
Confidence 467888888777666666667778999999877654 22 356888898888776665555434456899999987765
Q ss_pred CC-CC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC
Q psy15612 78 GK-DN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 78 ~~-~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
+. .+ .|.+.|+.+++.......... ...|+|+|++++..+.
T Consensus 295 Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~--~~~~SPDG~~Ia~~~~ 338 (419)
T PRK04043 295 SDRLGYPNIFMKKLNSGSVEQVVFHGKN--NSSVSTYKNYIVYSSR 338 (419)
T ss_pred ECCCCCceEEEEECCCCCeEeCccCCCc--CceECCCCCEEEEEEc
Confidence 43 33 577778887776422221211 2489999998876554
No 239
>KOG1310|consensus
Probab=99.29 E-value=2.2e-11 Score=77.91 Aligned_cols=78 Identities=21% Similarity=0.414 Sum_probs=69.9
Q ss_pred EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECC--CCCEEEEecCCCcEEEEE
Q psy15612 53 YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISA--DDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 53 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vw~ 128 (131)
..+.+|.+.|.++.|+.+|.++++|+.|-.+.|||....+.+ ...+|.+.|.++.|-| +.+.+++|..|..|+++|
T Consensus 44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfd 123 (758)
T KOG1310|consen 44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFD 123 (758)
T ss_pred hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEe
Confidence 457899999999999999999999999999999999877776 6678999999999998 456788999999999999
Q ss_pred ee
Q psy15612 129 VI 130 (131)
Q Consensus 129 ~~ 130 (131)
+.
T Consensus 124 l~ 125 (758)
T KOG1310|consen 124 LD 125 (758)
T ss_pred cc
Confidence 74
No 240
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.29 E-value=3.5e-10 Score=71.26 Aligned_cols=96 Identities=15% Similarity=0.226 Sum_probs=72.7
Q ss_pred EEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCC
Q psy15612 34 AVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADD 112 (131)
Q Consensus 34 ~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~ 112 (131)
++-..++.|.+.|..+.+. ..+.........+.++|||++++++++|+.+.++|+.+.+.+.....+.....++++++|
T Consensus 10 V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG 89 (369)
T PF02239_consen 10 VVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAVSPDG 89 (369)
T ss_dssp EEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE--TT
T ss_pred EEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEEcCCC
Confidence 4455689999999998885 455544444556889999999999999999999999999988655667778999999999
Q ss_pred CEEEEec-CCCcEEEEEe
Q psy15612 113 KYIVTGS-GDKKATVYEV 129 (131)
Q Consensus 113 ~~l~~~~-~d~~i~vw~~ 129 (131)
+++++++ .++.+.++|.
T Consensus 90 ~~~~v~n~~~~~v~v~D~ 107 (369)
T PF02239_consen 90 KYVYVANYEPGTVSVIDA 107 (369)
T ss_dssp TEEEEEEEETTEEEEEET
T ss_pred CEEEEEecCCCceeEecc
Confidence 9998776 4788999985
No 241
>KOG1587|consensus
Probab=99.29 E-value=7.4e-11 Score=77.01 Aligned_cols=115 Identities=11% Similarity=0.139 Sum_probs=89.5
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC-CCC-eEEeeccccceEEEEEccCC-CEEEEeCCCCeEEEeeCCCCc
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL-KPD-KYQLHLHESCVLSLRFAACG-KWFVSTGKDNLLNAWRTPYGA 92 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~-~~~-~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~~~~ 92 (131)
.|.+.|.++.++|=+..++..+.|-++++|... ... +..+..+...+.+++|||-- ..|+++..+|.+.+||+....
T Consensus 396 ~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~ 475 (555)
T KOG1587|consen 396 THIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDD 475 (555)
T ss_pred ccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccc
Confidence 578899999999977766555558999999987 332 34455666779999999964 467888889999999987543
Q ss_pred eE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 93 SI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 93 ~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.. ...........+.|+++|+.++.|...|++.+|++.
T Consensus 476 ~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 476 EEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLS 516 (555)
T ss_pred cCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcC
Confidence 32 333345667788889999999999999999999873
No 242
>KOG3881|consensus
Probab=99.28 E-value=6.8e-11 Score=72.56 Aligned_cols=111 Identities=16% Similarity=0.158 Sum_probs=89.8
Q ss_pred CEEEeCCCCc-eeeeec-CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGR-QLQQHD-FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
||+||.+.++ ++..+. .+..+.++...|+++++++|..-+.+..||+++++. ..+.+..+.+.++..+|..+++++
T Consensus 228 vR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las 307 (412)
T KOG3881|consen 228 VRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLAS 307 (412)
T ss_pred EEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEe
Confidence 5899998654 455553 456799999999999999999999999999999886 346778899999999999999999
Q ss_pred eCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCC
Q psy15612 77 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISAD 111 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~ 111 (131)
++-|+.++|+|+.+.+.+....-.+.++++-+.++
T Consensus 308 ~GLDRyvRIhD~ktrkll~kvYvKs~lt~il~~~~ 342 (412)
T KOG3881|consen 308 CGLDRYVRIHDIKTRKLLHKVYVKSRLTFILLRDD 342 (412)
T ss_pred eccceeEEEeecccchhhhhhhhhccccEEEecCC
Confidence 99999999999998666644334455666666543
No 243
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.28 E-value=1.9e-09 Score=68.39 Aligned_cols=115 Identities=10% Similarity=0.070 Sum_probs=99.0
Q ss_pred ecCCCCeEEEEECCCCCEEEEEeCCC-cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612 15 HDFSSQIFSLGYCPSGEWLAVGMENS-NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS 93 (131)
Q Consensus 15 ~~~~~~v~~~~~~~~~~~l~~~~~~~-~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 93 (131)
+++.+.|.-..+..+++-++.|..|+ .+-++|..+++...+...-+.|..++.+|+|++++.+.....+.+.|+.+|..
T Consensus 356 v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv 435 (668)
T COG4946 356 VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNV 435 (668)
T ss_pred cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCe
Confidence 35677788888888888888898888 89999999999888888889999999999999999999888999999999998
Q ss_pred E-EecCCCCCeEEEEECCCCCEEEEecCCC----cEEEEEe
Q psy15612 94 I-FQSKESSSVLSCDISADDKYIVTGSGDK----KATVYEV 129 (131)
Q Consensus 94 ~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~vw~~ 129 (131)
. ......+-|..+.|+|++++++-+-.+| .|+++|.
T Consensus 436 ~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm 476 (668)
T COG4946 436 RLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDM 476 (668)
T ss_pred eEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEec
Confidence 7 5555678899999999999998776554 5777775
No 244
>KOG0280|consensus
Probab=99.26 E-value=4.7e-10 Score=66.88 Aligned_cols=110 Identities=22% Similarity=0.225 Sum_probs=88.3
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccC-CCEEEEeCCCCeEEEeeCCC-CceE-
Q psy15612 21 IFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAAC-GKWFVSTGKDNLLNAWRTPY-GASI- 94 (131)
Q Consensus 21 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~w~~~~-~~~~- 94 (131)
..++.|++.+..+++...+|.+.+.+.....+ ...+.|+.+..-..|+.. .+.+++|+.|+.+..||++. ++.+
T Consensus 124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~ 203 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW 203 (339)
T ss_pred eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence 46788888888899998899888666655544 345778888888888864 46788999999999999994 3444
Q ss_pred -EecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612 95 -FQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 95 -~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~ 130 (131)
....|...|.++.-+| .+.++++|+.|..+++||.|
T Consensus 204 ~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtR 241 (339)
T KOG0280|consen 204 HNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTR 241 (339)
T ss_pred ecceeeecceEEEecCCCCCceEEEeccccceeeeehh
Confidence 2456889999999886 57799999999999999987
No 245
>KOG3914|consensus
Probab=99.25 E-value=5.1e-11 Score=73.16 Aligned_cols=91 Identities=14% Similarity=0.195 Sum_probs=74.5
Q ss_pred EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eE-EeeccccceEEEEEccCCCEEEEeCCC
Q psy15612 3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KY-QLHLHESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
+|....+.+...++|-..++.++++||++++++++.|..|++-...... .. ...+|+..|..++.-+ +..+++++.|
T Consensus 136 i~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~-~~~LlS~sGD 214 (390)
T KOG3914|consen 136 ILSADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTD-NYLLLSGSGD 214 (390)
T ss_pred eecccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeecc-CceeeecCCC
Confidence 3444446666667999999999999999999999999999997776444 33 3467999999998876 4558899999
Q ss_pred CeEEEeeCCCCceE
Q psy15612 81 NLLNAWRTPYGASI 94 (131)
Q Consensus 81 ~~i~~w~~~~~~~~ 94 (131)
+++++||+.+|+.+
T Consensus 215 ~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 215 KTLRLWDITSGKLL 228 (390)
T ss_pred CcEEEEecccCCcc
Confidence 99999999999876
No 246
>KOG2321|consensus
Probab=99.24 E-value=2.4e-10 Score=73.55 Aligned_cols=126 Identities=15% Similarity=0.198 Sum_probs=97.7
Q ss_pred CEEEeCCCCceeeeec-------CCC-----CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc--ccceEEEE
Q psy15612 1 MYLQSVSPGRQLQQHD-------FSS-----QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH--ESCVLSLR 66 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~-------~~~-----~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~--~~~v~~~~ 66 (131)
|..||.++......+. +.+ .|.++.|+.+|-.+++|..+|.+.+||++..+...+..| ..+|..+.
T Consensus 199 VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~ 278 (703)
T KOG2321|consen 199 VEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLD 278 (703)
T ss_pred EEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeec
Confidence 4679988776665552 222 399999999999999999999999999998886555444 55788898
Q ss_pred EccC--CCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612 67 FAAC--GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVY 127 (131)
Q Consensus 67 ~~~~--~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 127 (131)
|.+. ++.+++. ....+++||-.+|+..........+..+++-|++-+++++..+..+..|
T Consensus 279 ~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m~~y 340 (703)
T KOG2321|consen 279 WQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFTANESSKMHTY 340 (703)
T ss_pred ccccCCCceEEec-chHHhhhcccccCCceeeccccCCcCceeeecCCceEEEecCCCcceeE
Confidence 9775 3344443 3567899999999999766777779999999999999998877766554
No 247
>KOG4547|consensus
Probab=99.23 E-value=2.2e-09 Score=68.89 Aligned_cols=128 Identities=18% Similarity=0.134 Sum_probs=101.5
Q ss_pred CEEEeCCCCceeeee----cCCCCeEEEEE------CC--------------CCCEEEEEeCCCcEEEEeCCCCCeE-Ee
Q psy15612 1 MYLQSVSPGRQLQQH----DFSSQIFSLGY------CP--------------SGEWLAVGMENSNVEVLHALKPDKY-QL 55 (131)
Q Consensus 1 i~iwd~~~~~~~~~~----~~~~~v~~~~~------~~--------------~~~~l~~~~~~~~v~~~~~~~~~~~-~~ 55 (131)
+++||+.+++....+ ...+...+..| +| +-..++.|...|.+.+|+...+++. ++
T Consensus 17 l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ys~~~g~it~~~ 96 (541)
T KOG4547|consen 17 LRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLLYSVAGGEITAKL 96 (541)
T ss_pred EEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEEEEecCCeEEEEE
Confidence 589999988777665 22334444444 22 2224677888999999999999873 33
Q ss_pred --eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 56 --HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 56 --~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
..|.+.|.++.++.+-.+|.+++.|..+..|+...+... ........+.+++.+|||..+++++ ++|++||+.
T Consensus 97 st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~ 172 (541)
T KOG4547|consen 97 STDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIE 172 (541)
T ss_pred ecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEcc
Confidence 468999999999999999999999999999999988877 5666788899999999999998886 689999974
No 248
>KOG0322|consensus
Probab=99.22 E-value=6.2e-11 Score=69.68 Aligned_cols=70 Identities=17% Similarity=0.257 Sum_probs=63.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeC
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRT 88 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~ 88 (131)
..|..+.+.||++.+++++.|+.+++|+.++... ..+.-|...|.+++|+|+...++.++.|..|.+|++
T Consensus 252 pGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 252 PGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 4578899999999999999999999999998875 456778999999999999999999999999999985
No 249
>KOG0644|consensus
Probab=99.19 E-value=1.4e-11 Score=82.00 Aligned_cols=124 Identities=20% Similarity=0.232 Sum_probs=95.6
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
++||.++++.++... +|.+.+..++.+....++++++.|.-|++|-+..+.. ..+.+|++.|..++|+|-. +.+
T Consensus 214 vKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss 289 (1113)
T KOG0644|consen 214 VKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSS 289 (1113)
T ss_pred eeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCC
Confidence 589999999999888 9999999999999999999999999999999998875 5578999999999999964 778
Q ss_pred CCCeEEEeeCCCCceEEe-----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 79 KDNLLNAWRTPYGASIFQ-----SKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
.|+++++||.+-....+. ......+.++.|...+.-+.+++.|+....|.
T Consensus 290 ~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e 344 (1113)
T KOG0644|consen 290 DDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHE 344 (1113)
T ss_pred CCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccch
Confidence 899999999871111111 11224455555555566666666666555553
No 250
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.19 E-value=2.6e-08 Score=62.55 Aligned_cols=129 Identities=12% Similarity=0.217 Sum_probs=84.6
Q ss_pred CEEEeCCCCc--eee----eecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCC--CCCeEE---eec----c--ccce
Q psy15612 1 MYLQSVSPGR--QLQ----QHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHAL--KPDKYQ---LHL----H--ESCV 62 (131)
Q Consensus 1 i~iwd~~~~~--~~~----~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~--~~~~~~---~~~----~--~~~v 62 (131)
|++|++.... ... .+........+.|+|++++++.. ..+++|.++++. .+.... +.. . ....
T Consensus 168 v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T PF10282_consen 168 VYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAP 247 (345)
T ss_dssp EEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSE
T ss_pred EEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCc
Confidence 3566665443 321 22556778999999999987665 456779999887 333221 111 1 1257
Q ss_pred EEEEEccCCCEEEEeCC-CCeEEEeeCC--CCceE---EecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612 63 LSLRFAACGKWFVSTGK-DNLLNAWRTP--YGASI---FQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEV 129 (131)
Q Consensus 63 ~~~~~~~~~~~~~~~~~-~~~i~~w~~~--~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~ 129 (131)
..+.++|||++++++.+ .+.|.+|++. +++.. .....+..+..++++|+|++|+++.. ++.|.+|++
T Consensus 248 ~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~ 321 (345)
T PF10282_consen 248 AEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDI 321 (345)
T ss_dssp EEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEE
T ss_pred eeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEE
Confidence 78999999999887654 5679999983 45544 22223556899999999999987764 678999876
No 251
>KOG4497|consensus
Probab=99.18 E-value=2.7e-10 Score=69.10 Aligned_cols=116 Identities=10% Similarity=0.152 Sum_probs=88.0
Q ss_pred eCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEE-EeCCCC
Q psy15612 5 SVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFV-STGKDN 81 (131)
Q Consensus 5 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~ 81 (131)
|.++-+..+.+..-..|.-+.|..+..+++++ ..++.|.+|++...+- .++......+....|||||+.++ +...+-
T Consensus 35 d~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~l 114 (447)
T KOG4497|consen 35 DSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDL 114 (447)
T ss_pred ccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeeccee
Confidence 33444433333334567788898888776654 5677999999988875 56777888899999999998765 566688
Q ss_pred eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC
Q psy15612 82 LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 82 ~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
.|.+|.+.+.+.....-....+..++|+|+|++.+..+.
T Consensus 115 riTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sR 153 (447)
T KOG4497|consen 115 RITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSR 153 (447)
T ss_pred EEEEEEeccceeEEecccccCceeEEECCCCceeeeeec
Confidence 899999998887766556666789999999999877654
No 252
>KOG1409|consensus
Probab=99.18 E-value=9.9e-10 Score=66.85 Aligned_cols=74 Identities=20% Similarity=0.340 Sum_probs=65.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP 89 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~ 89 (131)
+|.+.+.++.|.|....|.+|..|..+.+||+...+ .....+|...|..+...+.-+.+.+++.|+.|.+|++.
T Consensus 195 ~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 195 GHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred CcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence 789999999999999999999999999999997655 46677888888888888888889999999999999965
No 253
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=99.18 E-value=1.4e-08 Score=65.63 Aligned_cols=114 Identities=10% Similarity=0.052 Sum_probs=83.1
Q ss_pred cCCCCeEEEEECC-CCCEEEEE----eCCCc----EEEEeCCCCCeEE----eeccccceEEEEEccCCCEEEEeCCCCe
Q psy15612 16 DFSSQIFSLGYCP-SGEWLAVG----MENSN----VEVLHALKPDKYQ----LHLHESCVLSLRFAACGKWFVSTGKDNL 82 (131)
Q Consensus 16 ~~~~~v~~~~~~~-~~~~l~~~----~~~~~----v~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (131)
..+....++.|+. ++..+.+. +.++. ..+|+....+.+. ....++.+.+++++|+...++.|+.||.
T Consensus 203 rTE~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgS 282 (545)
T PF11768_consen 203 RTENDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGS 282 (545)
T ss_pred EecCCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCe
Confidence 3444556777775 34455443 22333 3457766555422 2346778999999999999999999999
Q ss_pred EEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 83 LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 83 i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|.+||...+..... ...-.+..++|+|+|..+++++..|.+.+||++
T Consensus 283 iiLyD~~~~~t~~~-ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 283 IILYDTTRGVTLLA-KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred EEEEEcCCCeeeee-eecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 99999876644422 344567899999999999999999999999985
No 254
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.18 E-value=1.5e-08 Score=71.43 Aligned_cols=111 Identities=12% Similarity=0.071 Sum_probs=81.3
Q ss_pred CeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCeEEeec----------------------cccceEEEEEccCCCEEEE
Q psy15612 20 QIFSLGYCPSGEWLA-VGMENSNVEVLHALKPDKYQLHL----------------------HESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~~~~~~----------------------~~~~v~~~~~~~~~~~~~~ 76 (131)
....++++|++..|+ +...++.|++||+.++....+.+ .-..+..++++++|..+++
T Consensus 741 ~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVA 820 (1057)
T PLN02919 741 QPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVA 820 (1057)
T ss_pred CccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEE
Confidence 356799999988554 55567899999988655321110 0123568999999998888
Q ss_pred eCCCCeEEEeeCCCCceEEecCC--------------CCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASIFQSKE--------------SSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
-..++.|++||..++......+. -..+..++++++|+.+++-+.++.|++||+.
T Consensus 821 Ds~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~ 888 (1057)
T PLN02919 821 DSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLN 888 (1057)
T ss_pred ECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 88899999999987766522211 1357789999999988888888999999974
No 255
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.17 E-value=2.9e-08 Score=63.73 Aligned_cols=102 Identities=10% Similarity=-0.008 Sum_probs=72.6
Q ss_pred CCeEEEEECCCCCE-EEEEeC---CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe-CCC--CeEEEeeCCCC
Q psy15612 19 SQIFSLGYCPSGEW-LAVGME---NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST-GKD--NLLNAWRTPYG 91 (131)
Q Consensus 19 ~~v~~~~~~~~~~~-l~~~~~---~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~--~~i~~w~~~~~ 91 (131)
+......|+|||+. ++..+. ...|.++|+.+++...+....+......|+|||+.++.. +.+ ..|.++|+.++
T Consensus 188 ~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g 267 (419)
T PRK04043 188 GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK 267 (419)
T ss_pred CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence 36789999999985 554433 356888999988877766666666778899999877643 333 46788888877
Q ss_pred ceEEecCCCCCeEEEEECCCCCEEEEecC
Q psy15612 92 ASIFQSKESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
+...+...........|+|||+.++..+.
T Consensus 268 ~~~~LT~~~~~d~~p~~SPDG~~I~F~Sd 296 (419)
T PRK04043 268 TLTQITNYPGIDVNGNFVEDDKRIVFVSD 296 (419)
T ss_pred cEEEcccCCCccCccEECCCCCEEEEEEC
Confidence 76544444444456789999998876553
No 256
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.17 E-value=2.1e-10 Score=49.08 Aligned_cols=34 Identities=29% Similarity=0.391 Sum_probs=32.1
Q ss_pred EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 95 FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
...+|.+.|.+++|+|+++++++++.|+.|++||
T Consensus 6 ~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 6 TFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred EEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 5678999999999999999999999999999997
No 257
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.16 E-value=2.3e-10 Score=48.96 Aligned_cols=37 Identities=27% Similarity=0.527 Sum_probs=34.0
Q ss_pred ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEe
Q psy15612 10 RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLH 46 (131)
Q Consensus 10 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~ 46 (131)
+++..+ +|.+.|.+++|+|++..+++++.|+.+++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 566666 8999999999999999999999999999997
No 258
>KOG1517|consensus
Probab=99.16 E-value=7.2e-10 Score=75.87 Aligned_cols=128 Identities=15% Similarity=0.193 Sum_probs=96.4
Q ss_pred CEEEeCCCCce---eeee-cCCCC--eEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe---EEeecc---ccceEEEEE
Q psy15612 1 MYLQSVSPGRQ---LQQH-DFSSQ--IFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK---YQLHLH---ESCVLSLRF 67 (131)
Q Consensus 1 i~iwd~~~~~~---~~~~-~~~~~--v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~---~~~~~~---~~~v~~~~~ 67 (131)
||+||.+.... +... .|+.. |..+.+.+.|- .|++|+.+|.|.+||++.... ..+..| .+...++..
T Consensus 1233 vRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~V 1312 (1387)
T KOG1517|consen 1233 VRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTV 1312 (1387)
T ss_pred eEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeee
Confidence 68899875433 3333 67766 99999988665 499999999999999998432 222222 235889999
Q ss_pred ccCCCEEEEeCCCCeEEEeeCCCCceE-------EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 68 AACGKWFVSTGKDNLLNAWRTPYGASI-------FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+++...+++|+. ..|.||++...+.. +.....+.+.|++|+|..-.++.|+.|.+|.+|..
T Consensus 1313 H~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~ 1380 (1387)
T KOG1517|consen 1313 HEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSC 1380 (1387)
T ss_pred ccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeec
Confidence 999999999987 89999998733322 22234567799999999889999999999999863
No 259
>KOG1963|consensus
Probab=99.14 E-value=2.3e-09 Score=71.60 Aligned_cols=114 Identities=13% Similarity=0.128 Sum_probs=94.1
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-- 94 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-- 94 (131)
|...|.++.|+++|..|++|+.++-+.+|.+.+++...++.-.+.|..+.++||+...+....|+.|.+....+-+..
T Consensus 250 H~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~t 329 (792)
T KOG1963|consen 250 HHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKST 329 (792)
T ss_pred cccccceeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhh
Confidence 667899999999999999999999999999999997667777889999999999999999999999998876443322
Q ss_pred --Ee--------cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 95 --FQ--------SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 95 --~~--------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.. ....+-...++++|..+.++..+..+.|.+||+.
T Consensus 330 Isgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~ 375 (792)
T KOG1963|consen 330 ISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLY 375 (792)
T ss_pred ccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEecc
Confidence 11 1135667888999977777777888999999873
No 260
>KOG1064|consensus
Probab=99.13 E-value=6.7e-10 Score=79.44 Aligned_cols=128 Identities=10% Similarity=0.215 Sum_probs=101.6
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++|....++.+... ..+..|..+.|+.+|+.+..+..||.+.+|.+.......-..|.....+++|-. ..+++++
T Consensus 2232 v~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~~~s~qchnk~~~Df~Fi~--s~~~tag 2309 (2439)
T KOG1064|consen 2232 VRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKPYTSWQCHNKALSDFRFIG--SLLATAG 2309 (2439)
T ss_pred EEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCCcceeccccCCccccceeeee--hhhhccc
Confidence 467777777766655 334789999999999999999999999999998544455677887788888864 5566553
Q ss_pred ---CCCeEEEeeCCCC--ceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 ---KDNLLNAWRTPYG--ASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ---~~~~i~~w~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.++.+.+||..-. .......|.+.++++++-|..+.+++|+.+|.+.+||++
T Consensus 2310 ~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~r 2366 (2439)
T KOG1064|consen 2310 RSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIR 2366 (2439)
T ss_pred cCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehH
Confidence 3577999997532 233557899999999999999999999999999999986
No 261
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=99.10 E-value=1e-08 Score=66.30 Aligned_cols=73 Identities=18% Similarity=0.244 Sum_probs=63.5
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP 89 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~ 89 (131)
..+..+.+++++|+...++.|+.||.|.+||...+... .....-.+..++|+|+|..+++++..|.+.+||+.
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~-~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL-LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee-eeeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 67889999999999999999999999999999766433 22344567899999999999999999999999976
No 262
>KOG2041|consensus
Probab=99.07 E-value=4.2e-09 Score=69.98 Aligned_cols=111 Identities=15% Similarity=0.208 Sum_probs=94.1
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----------------eEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----------------KYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
..+....+++|+....++++|+.||.+++..+.+.. -+.+.+|.+.|.-+.|+...+.+.++..
T Consensus 12 PnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt 91 (1189)
T KOG2041|consen 12 PNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT 91 (1189)
T ss_pred CCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence 455678899999999999999999999998775432 0246789999999999999999999999
Q ss_pred CCeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy15612 80 DNLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATV 126 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 126 (131)
+|.|.+|-+-.|... ......+.|.+++|+.+|..+.....||.|.|
T Consensus 92 ~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIV 141 (1189)
T KOG2041|consen 92 SGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIV 141 (1189)
T ss_pred CceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEE
Confidence 999999999988876 44457788999999999999988888887765
No 263
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=99.04 E-value=1.4e-07 Score=56.29 Aligned_cols=113 Identities=15% Similarity=0.232 Sum_probs=77.2
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee----------------------------------------
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH---------------------------------------- 56 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~---------------------------------------- 56 (131)
...+-..++|+||+..|+.+...|+|++||+.+.++..+.
T Consensus 42 ~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L 121 (282)
T PF15492_consen 42 PNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQL 121 (282)
T ss_pred CCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEecccee
Confidence 3445688999999999999999999999998754321000
Q ss_pred -----------------------ccccceEEEEEccCCCEEEEeCCCC-----------eEEEeeCCCCceE--------
Q psy15612 57 -----------------------LHESCVLSLRFAACGKWFVSTGKDN-----------LLNAWRTPYGASI-------- 94 (131)
Q Consensus 57 -----------------------~~~~~v~~~~~~~~~~~~~~~~~~~-----------~i~~w~~~~~~~~-------- 94 (131)
.++..|.++.++|.-+.++.++... .+..|.+-++.+-
T Consensus 122 ~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~ 201 (282)
T PF15492_consen 122 RSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSE 201 (282)
T ss_pred eeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccC
Confidence 1233566677777767766654421 2455543322110
Q ss_pred ----------------------EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 95 ----------------------FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 95 ----------------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
........|..++.||+|+.|++..-+|.+.+|++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~i 258 (282)
T PF15492_consen 202 DDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEI 258 (282)
T ss_pred ccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEec
Confidence 00123567899999999999999999999999986
No 264
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.03 E-value=1.3e-07 Score=59.15 Aligned_cols=96 Identities=14% Similarity=0.030 Sum_probs=70.1
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCCe-EEeecc-------ccce
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME----------NSNVEVLHALKPDK-YQLHLH-------ESCV 62 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------~~~v~~~~~~~~~~-~~~~~~-------~~~v 62 (131)
|.+.|..+++.+..+........+ ++||++.++.+.. +..|.+||..+.+. ..+... ....
T Consensus 29 v~ViD~~~~~v~g~i~~G~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~ 107 (352)
T TIGR02658 29 VYTIDGEAGRVLGMTDGGFLPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYP 107 (352)
T ss_pred EEEEECCCCEEEEEEEccCCCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCcc
Confidence 457888888888777443333344 9999998877654 67899999999885 333321 2234
Q ss_pred EEEEEccCCCEEEEeCC--CCeEEEeeCCCCceEEec
Q psy15612 63 LSLRFAACGKWFVSTGK--DNLLNAWRTPYGASIFQS 97 (131)
Q Consensus 63 ~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~~~~ 97 (131)
..++++|||++++.... ++.+.+.|+.+++.+...
T Consensus 108 ~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei 144 (352)
T TIGR02658 108 WMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMM 144 (352)
T ss_pred ceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEE
Confidence 48899999999987753 688999999999988433
No 265
>KOG4532|consensus
Probab=99.02 E-value=5e-08 Score=58.02 Aligned_cols=99 Identities=13% Similarity=0.155 Sum_probs=74.3
Q ss_pred EEEEeCCCcEEEEeCCCCCeEE-eeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE----EecCCCCCeEEEE
Q psy15612 33 LAVGMENSNVEVLHALKPDKYQ-LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI----FQSKESSSVLSCD 107 (131)
Q Consensus 33 l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~ 107 (131)
+..++.|.+++++++..+.... +....-...++.+++|++++++.+..+.+..|.+.....- ......+.-.+.+
T Consensus 131 ~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S 210 (344)
T KOG4532|consen 131 LNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNS 210 (344)
T ss_pred eeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeee
Confidence 4556778888888876554322 1111123778999999999999999999999988654332 3445566667899
Q ss_pred ECCCCCEEEEecCCCcEEEEEeeC
Q psy15612 108 ISADDKYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 108 ~~~~~~~l~~~~~d~~i~vw~~~~ 131 (131)
|+.....++++..||++.|||+||
T Consensus 211 ~s~~~~~FAv~~Qdg~~~I~DVR~ 234 (344)
T KOG4532|consen 211 FSENDLQFAVVFQDGTCAIYDVRN 234 (344)
T ss_pred eccCcceEEEEecCCcEEEEEecc
Confidence 999999999999999999999986
No 266
>KOG0280|consensus
Probab=99.01 E-value=8.6e-09 Score=61.69 Aligned_cols=96 Identities=13% Similarity=0.200 Sum_probs=77.1
Q ss_pred cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEcc-CCCEEEEeCCCCeEEEeeCCC
Q psy15612 16 DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAA-CGKWFVSTGKDNLLNAWRTPY 90 (131)
Q Consensus 16 ~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~ 90 (131)
.|+-+....+|+.. .+.+.+|+.|+.+..||++.... .....|...|.++.-+| ++.++++|+.|..|++||.++
T Consensus 163 ~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRn 242 (339)
T KOG0280|consen 163 VHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRN 242 (339)
T ss_pred ccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhc
Confidence 56777788888653 46788999999999999994332 33456888899988876 577999999999999999995
Q ss_pred -CceEEecCCCCCeEEEEECCC
Q psy15612 91 -GASIFQSKESSSVLSCDISAD 111 (131)
Q Consensus 91 -~~~~~~~~~~~~v~~~~~~~~ 111 (131)
+++++.....+.|..+.++|.
T Consensus 243 m~kPl~~~~v~GGVWRi~~~p~ 264 (339)
T KOG0280|consen 243 MGKPLFKAKVGGGVWRIKHHPE 264 (339)
T ss_pred ccCccccCccccceEEEEecch
Confidence 666677777799999999884
No 267
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.00 E-value=3.6e-07 Score=56.16 Aligned_cols=110 Identities=15% Similarity=0.137 Sum_probs=82.3
Q ss_pred CeEEEEECCCCCEEEEEeC-CCcEEEEeCCC-CCe---EEeeccccc----------eEEEEEccCCCEEEEeCC-CCeE
Q psy15612 20 QIFSLGYCPSGEWLAVGME-NSNVEVLHALK-PDK---YQLHLHESC----------VLSLRFAACGKWFVSTGK-DNLL 83 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~-~~~---~~~~~~~~~----------v~~~~~~~~~~~~~~~~~-~~~i 83 (131)
....+++++++++++++.. .+.|.++.+.. +.+ .....|.+. +....+.|+++++++..- ...+
T Consensus 90 ~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri 169 (346)
T COG2706 90 PPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRI 169 (346)
T ss_pred CCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceE
Confidence 3478899999999988765 46788888854 332 122333333 788999999999887643 3458
Q ss_pred EEeeCCCCceE----EecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612 84 NAWRTPYGASI----FQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEV 129 (131)
Q Consensus 84 ~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~ 129 (131)
.+|++..|+.. .....+.....+.|+|++++.+..++ +++|.+|..
T Consensus 170 ~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y 220 (346)
T COG2706 170 FLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEY 220 (346)
T ss_pred EEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEE
Confidence 89999988765 33467788899999999999877766 889999975
No 268
>KOG2695|consensus
Probab=98.99 E-value=3.6e-09 Score=64.60 Aligned_cols=115 Identities=15% Similarity=0.190 Sum_probs=88.0
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-----eEEeeccccceEEEEEcc-CCCEEEEeCCCCeEEEeeCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-----KYQLHLHESCVLSLRFAA-CGKWFVSTGKDNLLNAWRTP 89 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-----~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~ 89 (131)
...+.|.++.|.-.++.+..|..+|.|..+|++.+. +....-|.+.+.++..-. +++++.+.+.+++|++||.+
T Consensus 250 ~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R 329 (425)
T KOG2695|consen 250 QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLR 329 (425)
T ss_pred ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeeh
Confidence 345678899999889999999999999999998652 344556888899887665 78899999999999999998
Q ss_pred CCce---E-EecCCC--CCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 90 YGAS---I-FQSKES--SSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 90 ~~~~---~-~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.-++ + .-.+|- ....-+...+....+++++.|-..++|.+.
T Consensus 330 ~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~ 376 (425)
T KOG2695|consen 330 ATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLD 376 (425)
T ss_pred hhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecc
Confidence 6665 3 223332 222334456677788889999999999874
No 269
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.98 E-value=2.7e-08 Score=63.81 Aligned_cols=120 Identities=14% Similarity=0.099 Sum_probs=81.6
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCc--EEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSN--VEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~--v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
++++|+.+++.......++.-...+|+|||+.|+.. ..++. +.++|+.+.....+....+.-..-.|+|||++++..
T Consensus 220 i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~ 299 (425)
T COG0823 220 IYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFT 299 (425)
T ss_pred EEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEE
Confidence 356788888777777666777788999999988654 34444 667788777765555444444477899999998755
Q ss_pred -CCCCe--EEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC
Q psy15612 78 -GKDNL--LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 78 -~~~~~--i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
++.+. |.+.+...+...........-....|+|+|++++..+.
T Consensus 300 Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~ 345 (425)
T COG0823 300 SDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFESS 345 (425)
T ss_pred eCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEec
Confidence 44444 55667766655433333333337889999999987664
No 270
>KOG1334|consensus
Probab=98.97 E-value=4.7e-09 Score=66.53 Aligned_cols=115 Identities=13% Similarity=0.116 Sum_probs=94.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEcc--CCCEEEEeCCCCeEEEeeCC-C
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAA--CGKWFVSTGKDNLLNAWRTP-Y 90 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~w~~~-~ 90 (131)
.|.+.|..+.|+..|..+++++.|..+.+||...... ....+|...|...+|-| +.+.++++++|+.+++=.+. +
T Consensus 140 ~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t 219 (559)
T KOG1334|consen 140 KHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILET 219 (559)
T ss_pred CCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccc
Confidence 7899999999999999999999999999999876653 44567888999999988 45678999999999876654 3
Q ss_pred CceE---EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 91 GASI---FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 91 ~~~~---~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
+.+. .+..|.+.+..++.-|+.. .|.+++.|+.+.-.|++
T Consensus 220 ~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr 263 (559)
T KOG1334|consen 220 GYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLR 263 (559)
T ss_pred cceecceecccccCccceeeecCCCCCcccccccccceeeeeec
Confidence 3333 5567999999999999765 47788899998888875
No 271
>KOG4532|consensus
Probab=98.95 E-value=4.9e-07 Score=53.95 Aligned_cols=111 Identities=11% Similarity=0.018 Sum_probs=82.8
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---E-EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-
Q psy15612 20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---Y-QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI- 94 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~- 94 (131)
.+.++.++++++++++.+....|..|.+..... . ........-.+..|+.....++++..|+.+.+||++.-..+
T Consensus 160 ~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm 239 (344)
T KOG4532|consen 160 TQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPM 239 (344)
T ss_pred ceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccch
Confidence 378999999999999999999999998864432 2 22223334568889999999999999999999999865443
Q ss_pred -----EecCCCCCeEEEEECCCCC--EEEEecCCCcEEEEEee
Q psy15612 95 -----FQSKESSSVLSCDISADDK--YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 95 -----~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~vw~~~ 130 (131)
....|.+.+..+.|++.|. +|...-.-+.+.+.|+|
T Consensus 240 ~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R 282 (344)
T KOG4532|consen 240 AEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTR 282 (344)
T ss_pred hhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcc
Confidence 2234789999999998664 33333344678888775
No 272
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.94 E-value=2.6e-07 Score=61.25 Aligned_cols=127 Identities=11% Similarity=0.037 Sum_probs=87.8
Q ss_pred EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC----------------------------------------CCcE
Q psy15612 3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME----------------------------------------NSNV 42 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------------------------------------~~~v 42 (131)
+.|.++.+...++...+....++++|+|+++++.+. ++.|
T Consensus 219 vID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~gn~V 298 (635)
T PRK02888 219 AVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGGSKV 298 (635)
T ss_pred EEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECCCEE
Confidence 446666666555544445556677777777766541 2347
Q ss_pred EEEeCCC-----CCeEEeeccccceEEEEEccCCCEEEEeCC-CCeEEEeeCCCCce------------EEecCCCCCeE
Q psy15612 43 EVLHALK-----PDKYQLHLHESCVLSLRFAACGKWFVSTGK-DNLLNAWRTPYGAS------------IFQSKESSSVL 104 (131)
Q Consensus 43 ~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~w~~~~~~~------------~~~~~~~~~v~ 104 (131)
.+.|..+ ........-...+..+.++|||+++++++. ++++.+.|+.+.+. ......+....
T Consensus 299 ~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPL 378 (635)
T PRK02888 299 PVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPL 378 (635)
T ss_pred EEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcc
Confidence 7777776 233333334556789999999999876654 78899999987553 12223456677
Q ss_pred EEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 105 SCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 105 ~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
..+|.++|+...+...|.++..||+
T Consensus 379 HTaFDg~G~aytslf~dsqv~kwn~ 403 (635)
T PRK02888 379 HTAFDGRGNAYTTLFLDSQIVKWNI 403 (635)
T ss_pred eEEECCCCCEEEeEeecceeEEEeh
Confidence 8999999998888888999999996
No 273
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.91 E-value=2.1e-06 Score=54.09 Aligned_cols=114 Identities=13% Similarity=0.110 Sum_probs=81.1
Q ss_pred CCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCC-CeEE---ee-----------ccccceEEEEEccCCCEEEEeC-C
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKP-DKYQ---LH-----------LHESCVLSLRFAACGKWFVSTG-K 79 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~-~~~~---~~-----------~~~~~v~~~~~~~~~~~~~~~~-~ 79 (131)
.......++++|++++|+++.. ++.+.++++... .+.. .. .....+.++.++|+|+++++.. .
T Consensus 85 ~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG 164 (345)
T PF10282_consen 85 GGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG 164 (345)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT
T ss_pred CCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC
Confidence 4456678999999999988864 788999999763 3211 11 1235678999999999887653 3
Q ss_pred CCeEEEeeCCCCc--eE----EecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEee
Q psy15612 80 DNLLNAWRTPYGA--SI----FQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEVI 130 (131)
Q Consensus 80 ~~~i~~w~~~~~~--~~----~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~~ 130 (131)
...|.+|++.... .. ...........+.|+|++++++...+ ++.|.++++.
T Consensus 165 ~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~ 222 (345)
T PF10282_consen 165 ADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYD 222 (345)
T ss_dssp TTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeec
Confidence 4578899887654 32 34467788999999999998876654 7788888764
No 274
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.88 E-value=9.8e-07 Score=62.67 Aligned_cols=109 Identities=9% Similarity=-0.013 Sum_probs=76.6
Q ss_pred eEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeec---------------cccceEEEEEccCCCEEE-EeCCCCeE
Q psy15612 21 IFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHL---------------HESCVLSLRFAACGKWFV-STGKDNLL 83 (131)
Q Consensus 21 v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~~~-~~~~~~~i 83 (131)
...++++| ++..+++...++.|.+|+..++....+.+ .-..+..++++|++..++ +-+.++.|
T Consensus 685 P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~I 764 (1057)
T PLN02919 685 PWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSI 764 (1057)
T ss_pred CeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeE
Confidence 45789999 45566666778889999987766433221 112456799999998554 55667899
Q ss_pred EEeeCCCCceEEec-------------C---------CCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 84 NAWRTPYGASIFQS-------------K---------ESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 84 ~~w~~~~~~~~~~~-------------~---------~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++||+.++...... + .-.....++++++|+.+++-..++.|++||.
T Consensus 765 rv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~ 832 (1057)
T PLN02919 765 RALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDP 832 (1057)
T ss_pred EEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEEC
Confidence 99999876533110 0 0123568899999998888888999999986
No 275
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.88 E-value=3.6e-07 Score=58.61 Aligned_cols=127 Identities=15% Similarity=0.230 Sum_probs=85.9
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE--eCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG--MENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
+|++++...........++|...+|.|.++.+++. -....+.++|++......+. +..-..+.|+|.+++++.++.
T Consensus 258 yl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl~~~~P--e~~rNT~~fsp~~r~il~agF 335 (561)
T COG5354 258 YLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGNLRFYFP--EQKRNTIFFSPHERYILFAGF 335 (561)
T ss_pred EEEeecccccceeccccccceeeeecccCCceeEEecccccceeecccccceEEecC--CcccccccccCcccEEEEecC
Confidence 45555522222222567899999999998876554 46777889999887443333 233346779999999999877
Q ss_pred C---CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEec------CCCcEEEEEee
Q psy15612 80 D---NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGS------GDKKATVYEVI 130 (131)
Q Consensus 80 ~---~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~d~~i~vw~~~ 130 (131)
+ +.+-+||......+...-......-+.|+|+++++.+.. .|..+++||+.
T Consensus 336 ~nl~gni~i~~~~~rf~~~~~~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~ 395 (561)
T COG5354 336 DNLQGNIEIFDPAGRFKVAGAFNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVY 395 (561)
T ss_pred CccccceEEeccCCceEEEEEeecCCceEeeccCCceEEEecCCCcccccCcceEEEEec
Confidence 6 458899987544433222334445678999999886542 36789999973
No 276
>KOG1240|consensus
Probab=98.88 E-value=8.5e-08 Score=66.97 Aligned_cols=130 Identities=15% Similarity=0.220 Sum_probs=88.5
Q ss_pred CEEEeCCCCceeeeec---CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE--eeccccceEEEEEccC---CC
Q psy15612 1 MYLQSVSPGRQLQQHD---FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ--LHLHESCVLSLRFAAC---GK 72 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~--~~~~~~~v~~~~~~~~---~~ 72 (131)
|..||+++......++ ..+.|.+++.+|.+++++.|...|.+.+||++-+.... ...+...+..+..+|- .+
T Consensus 1175 iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S 1254 (1431)
T KOG1240|consen 1175 IVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQES 1254 (1431)
T ss_pred eEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCc
Confidence 4578888776665553 33679999999999999999999999999998766422 2334466777777663 34
Q ss_pred EEEEeC--CCCeEEEeeCCCCceE--EecC-----------C-----CCC--eEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 73 WFVSTG--KDNLLNAWRTPYGASI--FQSK-----------E-----SSS--VLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 73 ~~~~~~--~~~~i~~w~~~~~~~~--~~~~-----------~-----~~~--v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
..++++ ..+.+.+|++.+|.+. .... . +.. ....++...+..+.+|+.|.+|+.||..
T Consensus 1255 ~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~ 1334 (1431)
T KOG1240|consen 1255 VSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPT 1334 (1431)
T ss_pred eEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCC
Confidence 555544 4678999999988665 1111 0 111 1122233345677888999999999975
No 277
>KOG4714|consensus
Probab=98.87 E-value=3.5e-08 Score=58.34 Aligned_cols=71 Identities=15% Similarity=0.274 Sum_probs=59.0
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEcc-CCCEEEEeCCCCeEEEeeCC
Q psy15612 19 SQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAA-CGKWFVSTGKDNLLNAWRTP 89 (131)
Q Consensus 19 ~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~ 89 (131)
..|.+++-+|..+ .+++|+.+|.+.+||.+.... ..+..|+.++..+-|+| ++..+++++.||.+..||..
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas 254 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAS 254 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCC
Confidence 3488888888654 567788999999999987642 34578999999999999 57789999999999999976
No 278
>KOG1409|consensus
Probab=98.86 E-value=8.3e-08 Score=58.76 Aligned_cols=78 Identities=12% Similarity=0.158 Sum_probs=67.2
Q ss_pred EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 53 YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 53 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.++.+|...+.+++|.|....+.++..|..+.+||+...+.. ...+|...|..+..-+.-+.+.+++.||.|.+||..
T Consensus 191 ~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 191 TTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred EEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence 456678999999999999999999999999999999755544 667788899888887778889999999999999864
No 279
>KOG2315|consensus
Probab=98.84 E-value=7.3e-08 Score=62.09 Aligned_cols=103 Identities=13% Similarity=0.244 Sum_probs=69.1
Q ss_pred EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|+|++ ++++..+ .+++=+++-|+|.|++++.++. -|.+.+||..+.++ ..+.. ....-+.|+|||.+|+++.
T Consensus 298 ifnlr-~~~v~df-~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a--~~tt~~eW~PdGe~flTAT 373 (566)
T KOG2315|consen 298 IFNLR-GKPVFDF-PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA--ANTTVFEWSPDGEYFLTAT 373 (566)
T ss_pred EEcCC-CCEeEeC-CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccccc--CCceEEEEcCCCcEEEEEe
Confidence 44444 4444333 3455678999999999887654 46799999988654 22222 2345688999999999875
Q ss_pred C------CCeEEEeeCCCCceEEecCCCCCeEEEEECC
Q psy15612 79 K------DNLLNAWRTPYGASIFQSKESSSVLSCDISA 110 (131)
Q Consensus 79 ~------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~ 110 (131)
. |+.++||+.. |+.+......+....+.|-|
T Consensus 374 TaPRlrvdNg~Kiwhyt-G~~l~~~~f~sEL~qv~W~P 410 (566)
T KOG2315|consen 374 TAPRLRVDNGIKIWHYT-GSLLHEKMFKSELLQVEWRP 410 (566)
T ss_pred ccccEEecCCeEEEEec-CceeehhhhhHhHhheeeee
Confidence 5 6789999985 66663333333566666665
No 280
>KOG0309|consensus
Probab=98.79 E-value=2e-08 Score=66.97 Aligned_cols=114 Identities=18% Similarity=0.205 Sum_probs=90.0
Q ss_pred cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612 16 DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA 92 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 92 (131)
+|...+..+.|+|+.. .+++++.|..+..||+++... .........-..++|+-....++..+..+.+.+||.+.|.
T Consensus 112 ghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs 191 (1081)
T KOG0309|consen 112 GHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGS 191 (1081)
T ss_pred cCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCC
Confidence 8889999999999755 678889999999999998774 3333445566789999866667777778889999999776
Q ss_pred eE--EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612 93 SI--FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 93 ~~--~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~ 129 (131)
.. ..++|-..+..++|..- ...+.+.+.|++++.||.
T Consensus 192 ~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y 231 (1081)
T KOG0309|consen 192 TPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDY 231 (1081)
T ss_pred cceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecc
Confidence 54 66678888888888753 345677888999999984
No 281
>KOG1275|consensus
Probab=98.78 E-value=1.2e-07 Score=64.52 Aligned_cols=125 Identities=14% Similarity=0.143 Sum_probs=90.7
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeC---------CCcEEEEeCCCCCeEEeeccccceEEEEEccC-
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGME---------NSNVEVLHALKPDKYQLHLHESCVLSLRFAAC- 70 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 70 (131)
-+-|.++.+.++.+ .|.+.+..+.. .|+.|++++. |..|++||++.-+...-.........++|.|.
T Consensus 200 ~LrD~~s~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl 277 (1118)
T KOG1275|consen 200 FLRDPNSFETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSL 277 (1118)
T ss_pred EeecCCcCceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccc
Confidence 35567777888888 78998887765 6888888765 55688999987664221122223356788886
Q ss_pred CCEEEEeCCCCeEEEeeC---CCCce-E-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 71 GKWFVSTGKDNLLNAWRT---PYGAS-I-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 71 ~~~~~~~~~~~~i~~w~~---~~~~~-~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
...+++++..|...+.|. .+... . .....++.+..+++++++..++.+..+|.|.+|-
T Consensus 278 ~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 278 TTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred cceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 446778888888888883 33321 1 4445566699999999999999999999999995
No 282
>KOG3621|consensus
Probab=98.78 E-value=1.8e-07 Score=61.91 Aligned_cols=114 Identities=11% Similarity=0.101 Sum_probs=90.1
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec--cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL--HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
+...+.--+++..+++++.|+..|.+.+|+-.++..+.... ..+.+.....+++..+++.++..+.|.++.+..+...
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~ 111 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR 111 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence 44567777778889999999999999999998877644433 5566677778998999999999999999987754332
Q ss_pred -------EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 95 -------FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 95 -------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
....|+..|++++|++++..+++|...|+|..-.+.
T Consensus 112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~ 154 (726)
T KOG3621|consen 112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELD 154 (726)
T ss_pred cceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEec
Confidence 223468899999999999999999999998876553
No 283
>KOG2695|consensus
Probab=98.75 E-value=1.7e-08 Score=61.74 Aligned_cols=96 Identities=14% Similarity=0.103 Sum_probs=77.3
Q ss_pred EEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC----c-eEEecCCCCCeEEEEEC
Q psy15612 35 VGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG----A-SIFQSKESSSVLSCDIS 109 (131)
Q Consensus 35 ~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~----~-~~~~~~~~~~v~~~~~~ 109 (131)
+.+.+..+.+-+++++....+. .++.|..+.|...++.+..|++.+.|..+|++.+ . +....-|++.|+++..-
T Consensus 229 s~G~sqqv~L~nvetg~~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~L 307 (425)
T KOG2695|consen 229 SVGLSQQVLLTNVETGHQQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQIL 307 (425)
T ss_pred cccccceeEEEEeecccccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhh
Confidence 3445566888888887765555 6678899999988999999999999999999865 2 22566789999988876
Q ss_pred C-CCCEEEEecCCCcEEEEEeeC
Q psy15612 110 A-DDKYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 110 ~-~~~~l~~~~~d~~i~vw~~~~ 131 (131)
. ++++|++.+.+|+|++||+|.
T Consensus 308 q~s~q~LmaS~M~gkikLyD~R~ 330 (425)
T KOG2695|consen 308 QFSQQKLMASDMTGKIKLYDLRA 330 (425)
T ss_pred ccccceEeeccCcCceeEeeehh
Confidence 6 778888888999999999973
No 284
>KOG2066|consensus
Probab=98.74 E-value=1.1e-06 Score=59.28 Aligned_cols=98 Identities=19% Similarity=0.196 Sum_probs=74.6
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccC-----CCEEEEeCCCCeEEEeeCC---CCceEEecCCC
Q psy15612 29 SGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAAC-----GKWFVSTGKDNLLNAWRTP---YGASIFQSKES 100 (131)
Q Consensus 29 ~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~i~~w~~~---~~~~~~~~~~~ 100 (131)
+|.++++|+.||++.+..+.+.+.........++.+++++|+ .+.+++|+..| +.++.-. ...........
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~e 160 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDDEITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGE 160 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCccceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCc
Confidence 599999999999999999887776444455678899999997 45688888887 6666422 22222455678
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 101 SSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 101 ~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+.|.++.| .|++++-++.+| ++|||..
T Consensus 161 G~I~~i~W--~g~lIAWand~G-v~vyd~~ 187 (846)
T KOG2066|consen 161 GPIHSIKW--RGNLIAWANDDG-VKVYDTP 187 (846)
T ss_pred cceEEEEe--cCcEEEEecCCC-cEEEecc
Confidence 99999999 588888887666 8999863
No 285
>KOG1354|consensus
Probab=98.73 E-value=4.3e-08 Score=60.08 Aligned_cols=113 Identities=13% Similarity=0.167 Sum_probs=81.5
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEE---eecc-----ccceEEEEEccC-CCEEEEeCCCCeEEE
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQ---LHLH-----ESCVLSLRFAAC-GKWFVSTGKDNLLNA 85 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~---~~~~-----~~~v~~~~~~~~-~~~~~~~~~~~~i~~ 85 (131)
.|..-|.++.++.|+..++++. |-.|.+|+++-.. ... +..+ ..-|.+..|+|. -+.++-++..|.|++
T Consensus 162 aHtyhiNSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrL 240 (433)
T KOG1354|consen 162 AHTYHINSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRL 240 (433)
T ss_pred cceeEeeeeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEE
Confidence 4777799999999999988874 5679999986332 211 2222 345778899996 456777888999999
Q ss_pred eeCCCCceE------Eec-----------CCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 86 WRTPYGASI------FQS-----------KESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 86 w~~~~~~~~------~~~-----------~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|++..... +.. .--..|..+.|++.|+++++-.. -++++||+.
T Consensus 241 cDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~n 301 (433)
T KOG1354|consen 241 CDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLN 301 (433)
T ss_pred eechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEecc
Confidence 999854332 111 11255788999999999987643 589999985
No 286
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.73 E-value=2.2e-06 Score=53.86 Aligned_cols=89 Identities=9% Similarity=0.008 Sum_probs=64.7
Q ss_pred CcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC----------CCeEEEeeCCCCceEEecCCC--------
Q psy15612 40 SNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK----------DNLLNAWRTPYGASIFQSKES-------- 100 (131)
Q Consensus 40 ~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~----------~~~i~~w~~~~~~~~~~~~~~-------- 100 (131)
+.+.+.|..+.+. ..+..-. ....+ ++||++.++.+.. +..|.+||..+.+.......+
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~-~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~ 104 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGF-LPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG 104 (352)
T ss_pred ceEEEEECCCCEEEEEEEccC-CCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence 7899999998886 3343322 23344 9999998877644 778999999999988333322
Q ss_pred CCeEEEEECCCCCEEEEecC--CCcEEEEEee
Q psy15612 101 SSVLSCDISADDKYIVTGSG--DKKATVYEVI 130 (131)
Q Consensus 101 ~~v~~~~~~~~~~~l~~~~~--d~~i~vw~~~ 130 (131)
.....++++|+|++++.... +..+.+.|+.
T Consensus 105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~ 136 (352)
T TIGR02658 105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLE 136 (352)
T ss_pred CccceEEECCCCCEEEEecCCCCCEEEEEECC
Confidence 23348899999999887653 6789888864
No 287
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.72 E-value=4.9e-06 Score=51.37 Aligned_cols=130 Identities=18% Similarity=0.168 Sum_probs=87.2
Q ss_pred CEEEeCCC--Cce--eeeecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCC--CCeEEe---eccccceEEEEEc
Q psy15612 1 MYLQSVSP--GRQ--LQQHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALK--PDKYQL---HLHESCVLSLRFA 68 (131)
Q Consensus 1 i~iwd~~~--~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~--~~~~~~---~~~~~~v~~~~~~ 68 (131)
|+.|++.+ ++. +......+.+.-++|+|+++.|.++.. .+.+..|.+.. +++..+ ........-++++
T Consensus 18 I~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd 97 (346)
T COG2706 18 IYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVD 97 (346)
T ss_pred eEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEEC
Confidence 56777763 222 223366778899999999999988755 46677777654 554332 2223344789999
Q ss_pred cCCCEEEEeCC-CCeEEEeeCCC-CceE---EecCCCCC----------eEEEEECCCCCEEEEecC-CCcEEEEEee
Q psy15612 69 ACGKWFVSTGK-DNLLNAWRTPY-GASI---FQSKESSS----------VLSCDISADDKYIVTGSG-DKKATVYEVI 130 (131)
Q Consensus 69 ~~~~~~~~~~~-~~~i~~w~~~~-~~~~---~~~~~~~~----------v~~~~~~~~~~~l~~~~~-d~~i~vw~~~ 130 (131)
++|++++++.. .+.|.++-+++ |... ....|.+. +....+.|+++++++..- ..+|.+|++.
T Consensus 98 ~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~ 175 (346)
T COG2706 98 EDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLD 175 (346)
T ss_pred CCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcc
Confidence 99999888755 46788988864 5443 22233333 888899999999887653 3468888763
No 288
>KOG4640|consensus
Probab=98.71 E-value=2.7e-07 Score=60.55 Aligned_cols=94 Identities=13% Similarity=0.115 Sum_probs=77.8
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceE-EEEEccCCCEEEEeCCCCeEEEeeCCCCceEE
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVL-SLRFAACGKWFVSTGKDNLLNAWRTPYGASIF 95 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 95 (131)
....+..+.|+|.-..+|.+..+|.+.+.-+...++-.++-+...+. +++|.|||+.++.|-.||+|++.|..++..+.
T Consensus 19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLNWQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred cccceEEEEEcCccchhheeccCCcEEEEEeccceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 44568899999999999999999999998888666666665555666 99999999999999999999999999988773
Q ss_pred --ecCCCCCeEEEEECC
Q psy15612 96 --QSKESSSVLSCDISA 110 (131)
Q Consensus 96 --~~~~~~~v~~~~~~~ 110 (131)
.......|.++-|++
T Consensus 99 ~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 99 SFLFSVETDISKGIWDR 115 (665)
T ss_pred ccccccccchheeeccc
Confidence 355667777777763
No 289
>KOG1354|consensus
Probab=98.66 E-value=3.1e-07 Score=56.44 Aligned_cols=128 Identities=13% Similarity=0.294 Sum_probs=86.0
Q ss_pred CEEEeCCC-Cceeeee---c-----CCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-------EE---------
Q psy15612 1 MYLQSVSP-GRQLQQH---D-----FSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-------YQ--------- 54 (131)
Q Consensus 1 i~iwd~~~-~~~~~~~---~-----~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-------~~--------- 54 (131)
|.+|+++- .+..... . ...-|.+..|+|. ...++..+..|+|++.|++...+ ..
T Consensus 187 INLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rs 266 (433)
T KOG1354|consen 187 INLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRS 266 (433)
T ss_pred eeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchh
Confidence 45787762 3333322 2 2245889999996 55677778899999999984321 00
Q ss_pred -eeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC-CCceE-EecCC------------CCCe---EEEEECCCCCEEE
Q psy15612 55 -LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP-YGASI-FQSKE------------SSSV---LSCDISADDKYIV 116 (131)
Q Consensus 55 -~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~-~~~~~-~~~~~------------~~~v---~~~~~~~~~~~l~ 116 (131)
+..--+.|.+++|+++|+++++-.. .++++||+. ..+++ ...-| ...| ..++|+.++.+++
T Consensus 267 ffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~ 345 (433)
T KOG1354|consen 267 FFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVM 345 (433)
T ss_pred hHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEe
Confidence 1122356889999999999987653 578999984 33333 21111 2222 5688999999999
Q ss_pred EecCCCcEEEEEe
Q psy15612 117 TGSGDKKATVYEV 129 (131)
Q Consensus 117 ~~~~d~~i~vw~~ 129 (131)
+|+....++++++
T Consensus 346 TGsy~n~frvf~~ 358 (433)
T KOG1354|consen 346 TGSYNNVFRVFNL 358 (433)
T ss_pred cccccceEEEecC
Confidence 9999999999884
No 290
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.64 E-value=1.5e-05 Score=47.92 Aligned_cols=127 Identities=10% Similarity=0.049 Sum_probs=83.1
Q ss_pred EEEeCCCCceeeeec------CCCCeEEEEECCCCCEEEEEeCC--------CcEEEEeCCCCCeEEeeccccceEEEEE
Q psy15612 2 YLQSVSPGRQLQQHD------FSSQIFSLGYCPSGEWLAVGMEN--------SNVEVLHALKPDKYQLHLHESCVLSLRF 67 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~--------~~v~~~~~~~~~~~~~~~~~~~v~~~~~ 67 (131)
.++|..+++...... .....+.+++.|+|++.++.... +.+..++.. ++.......-.....++|
T Consensus 63 ~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~ 141 (246)
T PF08450_consen 63 AVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAF 141 (246)
T ss_dssp EEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEE
T ss_pred EEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEE
Confidence 456877776554432 23468899999999977765443 446777777 555444444556789999
Q ss_pred ccCCCEEE-EeCCCCeEEEeeCCCCce--E----EecCC--CCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 68 AACGKWFV-STGKDNLLNAWRTPYGAS--I----FQSKE--SSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 68 ~~~~~~~~-~~~~~~~i~~w~~~~~~~--~----~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+|+++.++ +-+..+.|..+++..... . ..... .+..-.+++..+|++.++....+.|.++|.
T Consensus 142 s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p 212 (246)
T PF08450_consen 142 SPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDP 212 (246)
T ss_dssp ETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEET
T ss_pred CCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECC
Confidence 99999776 557788898888853222 1 21112 234788999999998777666778888764
No 291
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.61 E-value=6.3e-06 Score=57.97 Aligned_cols=128 Identities=13% Similarity=0.134 Sum_probs=84.8
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEEe----eccccceEEEEEccCCC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQL----HLHESCVLSLRFAACGK 72 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~ 72 (131)
+|+|+-+ |+...+- ...+--.+++|.|.|+++++.-. ...|.+|+-.+-+...+ ......+..+.|++|+.
T Consensus 239 iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~ 317 (928)
T PF04762_consen 239 IRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSE 317 (928)
T ss_pred EEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCC
Confidence 5788855 6544433 33344568999999999998754 34566777655443222 23456789999999999
Q ss_pred EEEEeCCCCeEEEeeCCCCceE----EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612 73 WFVSTGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~ 130 (131)
.++....+. |.+|...+...- ........+..+.|+|.. ..+.....++.+..+++.
T Consensus 318 iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~ 379 (928)
T PF04762_consen 318 ILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFA 379 (928)
T ss_pred EEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEE
Confidence 998876554 999998877653 222234445559999853 446666666777666654
No 292
>KOG1334|consensus
Probab=98.59 E-value=3.1e-07 Score=58.65 Aligned_cols=111 Identities=15% Similarity=0.215 Sum_probs=85.7
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-------------eEE-eecccc--ceEEEEEc-cCCCEEEEeCCCC
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-------------KYQ-LHLHES--CVLSLRFA-ACGKWFVSTGKDN 81 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-------------~~~-~~~~~~--~v~~~~~~-~~~~~~~~~~~~~ 81 (131)
-.|.+++++.++.-|++.-.|-.++++....+. ... .++|.. .|..+-|- |...++++|+.-|
T Consensus 337 v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCG 416 (559)
T KOG1334|consen 337 VNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCG 416 (559)
T ss_pred ccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccc
Confidence 458999999877766666677788988543221 111 345543 46667664 6677899999889
Q ss_pred eEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 82 LLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 82 ~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.|.+|+-.+++.+ +..+...-|.|+.-+|--..|++.+-|..|+||-.
T Consensus 417 hIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP 465 (559)
T KOG1334|consen 417 HIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTP 465 (559)
T ss_pred eEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecC
Confidence 9999999999888 66666679999999999999999999999999964
No 293
>KOG4190|consensus
Probab=98.59 E-value=9.2e-08 Score=62.32 Aligned_cols=77 Identities=12% Similarity=0.167 Sum_probs=60.8
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-------e-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-------K-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR 87 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-------~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~ 87 (131)
+|+..|..++--.+.+.+++++.|.+|++|.++..- + .+.+.|+.+|.++.|-.+-++++++ |+.+.+||
T Consensus 733 GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giHlWD 810 (1034)
T KOG4190|consen 733 GHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGIHLWD 810 (1034)
T ss_pred CcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcceeec
Confidence 788888888777788889999999999999986321 2 3457899999999999888877654 77899999
Q ss_pred CCCCceE
Q psy15612 88 TPYGASI 94 (131)
Q Consensus 88 ~~~~~~~ 94 (131)
.--|+.+
T Consensus 811 PFigr~L 817 (1034)
T KOG4190|consen 811 PFIGRLL 817 (1034)
T ss_pred ccccchh
Confidence 6555444
No 294
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=98.58 E-value=1.3e-05 Score=55.09 Aligned_cols=126 Identities=10% Similarity=0.186 Sum_probs=83.3
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCC-------CCEEEEEeCCCcEEEEeCCCCC--eEE--e--eccccceEEEEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPS-------GEWLAVGMENSNVEVLHALKPD--KYQ--L--HLHESCVLSLRF 67 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~-------~~~l~~~~~~~~v~~~~~~~~~--~~~--~--~~~~~~v~~~~~ 67 (131)
|+-.|++.|+.+........+.-..+.|+ ...-+.|-.+..+..||.+-.. +.. . -.......|++-
T Consensus 506 ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aT 585 (794)
T PF08553_consen 506 LYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFAT 585 (794)
T ss_pred eEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEe
Confidence 34568889998887743333323444443 2234566667779999987532 211 1 123345667777
Q ss_pred ccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 68 AACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+.+| +|+.|+.+|.|++||-. |+.- .+.+-+.+|.++..+.||++++..+. ..+.+++.
T Consensus 586 t~~G-~iavgs~~G~IRLyd~~-g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi~t 646 (794)
T PF08553_consen 586 TEDG-YIAVGSNKGDIRLYDRL-GKRAKTALPGLGDPIIGIDVTADGKWILATCK-TYLLLIDT 646 (794)
T ss_pred cCCc-eEEEEeCCCcEEeeccc-chhhhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEEEE
Confidence 6666 57889999999999943 4333 44566899999999999999988775 45666654
No 295
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.57 E-value=3.4e-06 Score=54.45 Aligned_cols=119 Identities=17% Similarity=0.102 Sum_probs=79.7
Q ss_pred Cceeeee-cCCCCeEEEEECCCCCEEEEE---eCC-CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe-CCCCe
Q psy15612 9 GRQLQQH-DFSSQIFSLGYCPSGEWLAVG---MEN-SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST-GKDNL 82 (131)
Q Consensus 9 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~~---~~~-~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~ 82 (131)
+.....+ .....+...+|+|+++.++.. ... ..+.++++.+++...+....+.-..-+|+|||+.++.+ .+++.
T Consensus 182 g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~ 261 (425)
T COG0823 182 GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGS 261 (425)
T ss_pred CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCC
Confidence 3334444 344567889999999987654 222 45888999888765555555566678899999987654 55555
Q ss_pred --EEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEE
Q psy15612 83 --LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVY 127 (131)
Q Consensus 83 --i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw 127 (131)
|++.|+.++....+....+.-..-.|+|+|++++..+. .|.-.||
T Consensus 262 ~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~ 309 (425)
T COG0823 262 PDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIY 309 (425)
T ss_pred ccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceE
Confidence 66668776664454444455558889999999876543 5554444
No 296
>KOG1064|consensus
Probab=98.54 E-value=2.7e-07 Score=66.98 Aligned_cols=104 Identities=16% Similarity=0.252 Sum_probs=74.8
Q ss_pred cCCCCeEEEEECCCCCEEEEE---eCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVG---MENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY 90 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~---~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~ 90 (131)
.|+.....+.|-. ..++++ ..++.+.+||..... ......|.+.+.++++.|..+.+++|+++|.+.+||++.
T Consensus 2290 chnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rq 2367 (2439)
T KOG1064|consen 2290 CHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQ 2367 (2439)
T ss_pred cCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHH
Confidence 3444455555533 333443 346789999975433 233378999999999999999999999999999999987
Q ss_pred CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 91 GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.+....... +. ...++++++..|.++||++.
T Consensus 2368 rql~h~~~~--------~~-~~~~f~~~ss~g~ikIw~~s 2398 (2439)
T KOG1064|consen 2368 RQLRHTFQA--------LD-TREYFVTGSSEGNIKIWRLS 2398 (2439)
T ss_pred HHHHHHhhh--------hh-hhheeeccCcccceEEEEcc
Confidence 665522211 33 45688999999999999873
No 297
>KOG1912|consensus
Probab=98.53 E-value=6.7e-06 Score=55.79 Aligned_cols=127 Identities=10% Similarity=0.077 Sum_probs=90.7
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCC------------CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEE
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPS------------GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRF 67 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~------------~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~ 67 (131)
.+-|..+-+.++.+ .|+..|..+.|.|. .-.|++++..|.|.+||...... ..+..+..++.++.|
T Consensus 38 ~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W 117 (1062)
T KOG1912|consen 38 SVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCW 117 (1062)
T ss_pred EEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheee
Confidence 45577777777777 67888999999763 12467788899999999987664 556667778889988
Q ss_pred cc---CC-CEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEE
Q psy15612 68 AA---CG-KWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 68 ~~---~~-~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~ 128 (131)
-+ +. ..++.-.....+.+|+..+|+.. ..........|+.+.| +.+.+...+..|.+.+.+
T Consensus 118 ~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~ 184 (1062)
T KOG1912|consen 118 VPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCK 184 (1062)
T ss_pred eeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEe
Confidence 76 33 34556677788999999999988 3334455566788887 555555555556665544
No 298
>KOG2314|consensus
Probab=98.53 E-value=3.5e-06 Score=54.97 Aligned_cols=105 Identities=21% Similarity=0.295 Sum_probs=76.0
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC-----------CCeEEEeeCC
Q psy15612 21 IFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK-----------DNLLNAWRTP 89 (131)
Q Consensus 21 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-----------~~~i~~w~~~ 89 (131)
-+-+.|||.|.+|++-..-| |.+|--.+........|+ .|.-+.|||..++|++-+. ...+.|||+.
T Consensus 213 etyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~ 290 (698)
T KOG2314|consen 213 ETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFYHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA 290 (698)
T ss_pred eeeEEecCCceEEEEEeccc-eeeecCccHHHHHhccCC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence 46789999999999987766 888876655432323343 4788999999999987543 2468999999
Q ss_pred CCceE--Eec--CCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 90 YGASI--FQS--KESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 90 ~~~~~--~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+|... +.. .....-.-..||.|+++++.-..+ .|.|++
T Consensus 291 tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~-sisIyE 332 (698)
T KOG2314|consen 291 TGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN-SISIYE 332 (698)
T ss_pred ccchhcceeccCCCccccceEEeccCCceeEEeccc-eEEEEe
Confidence 99887 222 233334567899999999876654 577775
No 299
>KOG4714|consensus
Probab=98.50 E-value=2.8e-07 Score=54.66 Aligned_cols=68 Identities=12% Similarity=0.159 Sum_probs=57.8
Q ss_pred eEEEEEccCCC-EEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEe
Q psy15612 62 VLSLRFAACGK-WFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 62 v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~ 129 (131)
+.+++-+|..+ .+++|+.++.+-+||.++..-. .++.|...+..+.|+| ++..|+++++||.+-.||.
T Consensus 182 v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wda 253 (319)
T KOG4714|consen 182 VTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDA 253 (319)
T ss_pred chhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcC
Confidence 78888888655 5667888999999999988655 6778999999999999 5678999999999999985
No 300
>KOG2314|consensus
Probab=98.49 E-value=2.8e-06 Score=55.43 Aligned_cols=102 Identities=11% Similarity=0.086 Sum_probs=71.7
Q ss_pred ecCCCCeEEEEECCCCCEEEEEeC-----------CCcEEEEeCCCCCe-EEeec---cccceEEEEEccCCCEEEEeCC
Q psy15612 15 HDFSSQIFSLGYCPSGEWLAVGME-----------NSNVEVLHALKPDK-YQLHL---HESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 15 ~~~~~~v~~~~~~~~~~~l~~~~~-----------~~~v~~~~~~~~~~-~~~~~---~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
+.|++ |.-+.|||..++|++-+. ...+.|||++++.. +.+.. ....-.-+.||-|+++++.-..
T Consensus 247 F~Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~ 325 (698)
T KOG2314|consen 247 FYHPG-VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG 325 (698)
T ss_pred ccCCC-ceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc
Confidence 33443 778999999999998543 24689999999986 33333 2223346899999999987654
Q ss_pred CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEe
Q psy15612 80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~ 118 (131)
+.|.+++..+-..+ ...-.-+.|....|+|.++.|+--
T Consensus 326 -~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYw 364 (698)
T KOG2314|consen 326 -NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYW 364 (698)
T ss_pred -ceEEEEecCceeeecccccCCccccCcccCCCcceEEEE
Confidence 67889987764444 222345778889999998887643
No 301
>KOG3617|consensus
Probab=98.49 E-value=1e-06 Score=60.18 Aligned_cols=112 Identities=11% Similarity=0.029 Sum_probs=84.4
Q ss_pred CCCCeEEEEECCCCCEEEEEeC----CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGME----NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA 92 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~----~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 92 (131)
..+...-..|+|...+++.++. .|.|.||-- +++...-...+-.+.+++|+|..-.++.+-.-+.+.+|...+.+
T Consensus 14 sdavsti~SWHPsePlfAVA~fS~er~GSVtIfad-tGEPqr~Vt~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e 92 (1416)
T KOG3617|consen 14 SDAVSTISSWHPSEPLFAVASFSPERGGSVTIFAD-TGEPQRDVTYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE 92 (1416)
T ss_pred ccccccccccCCCCceeEEEEecCCCCceEEEEec-CCCCCcccccceehhhhccChHHHHHhhccccceeEEEecCCce
Confidence 3344556789999999887653 566777643 23322212223345679999987778888888899999988766
Q ss_pred eE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 93 SI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 93 ~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.. ....|+..+..+.|||+|+.++++..-|.+.+|..
T Consensus 93 ~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~ 130 (1416)
T KOG3617|consen 93 THTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRY 130 (1416)
T ss_pred eeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEe
Confidence 65 67789999999999999999999999999999975
No 302
>KOG2041|consensus
Probab=98.46 E-value=7.5e-07 Score=59.82 Aligned_cols=113 Identities=12% Similarity=0.113 Sum_probs=87.8
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEe--eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQL--HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA 92 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 92 (131)
+|++.|.-+.|+.+.+.|.+...+|.+.+|-+-.+.- ..+ ...++.|.++.|+.||..++..-.||.+.+=.+. |.
T Consensus 69 GH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd-GN 147 (1189)
T KOG2041|consen 69 GHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD-GN 147 (1189)
T ss_pred cCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec-cc
Confidence 7999999999999999999999999999999987763 222 3356789999999999999999889887665543 54
Q ss_pred eEEec-CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 93 SIFQS-KESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 93 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+.-+ -.......+.|++|.+.+..+-.+|...++|-
T Consensus 148 RIwgKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydn 185 (1189)
T KOG2041|consen 148 RIWGKELKGQLLAHVLWSEDLEQALFKKANGETHLYDN 185 (1189)
T ss_pred eecchhcchheccceeecccHHHHHhhhcCCcEEEecc
Confidence 44211 12334457889999888888777888888874
No 303
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.45 E-value=3.4e-06 Score=53.31 Aligned_cols=102 Identities=14% Similarity=0.148 Sum_probs=67.5
Q ss_pred CCCCCEEEEEe---------CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEec
Q psy15612 27 CPSGEWLAVGM---------ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS 97 (131)
Q Consensus 27 ~~~~~~l~~~~---------~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 97 (131)
|||+++++... ..+...++|+.+++...+......+....|||+|+.++... ++.|.+.+..+++...+.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT 79 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLT 79 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEec
Confidence 57888776632 23568899999988766655567788999999999988775 678999998777554222
Q ss_pred CC------------------CCCeEEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612 98 KE------------------SSSVLSCDISADDKYIVTGSG-DKKATVYEV 129 (131)
Q Consensus 98 ~~------------------~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~ 129 (131)
.. -+.-..+-|||++++|+.... ++.++.+.+
T Consensus 80 ~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~ 130 (353)
T PF00930_consen 80 TDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPL 130 (353)
T ss_dssp S--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEE
T ss_pred cccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEe
Confidence 11 123356889999999986654 455555544
No 304
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.44 E-value=7.8e-06 Score=48.67 Aligned_cols=128 Identities=15% Similarity=0.097 Sum_probs=73.6
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEE--ECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLG--YCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|..+|.++|+.+............. ..+++..+++++.++.+..+|..+++..-.......+...... ++..++.++
T Consensus 5 l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~v~v~~ 83 (238)
T PF13360_consen 5 LSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVV-DGGRVYVGT 83 (238)
T ss_dssp EEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEE-ETTEEEEEE
T ss_pred EEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeee-ccccccccc
Confidence 4678999999998874422121111 2335667777789999999999888752211111111111122 345556666
Q ss_pred CCCeEEEeeCCCCceEEe--cCC--C-CCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 79 KDNLLNAWRTPYGASIFQ--SKE--S-SSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~--~~~--~-~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.++.+..+|..+|+.+.. ... . ...........+..++.+..++.+..+|+
T Consensus 84 ~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 139 (238)
T PF13360_consen 84 SDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDP 139 (238)
T ss_dssp TTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEET
T ss_pred ceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEec
Confidence 777999999999998832 221 1 11122222223666666666677777664
No 305
>KOG1645|consensus
Probab=98.44 E-value=2.5e-06 Score=53.56 Aligned_cols=91 Identities=9% Similarity=0.001 Sum_probs=68.4
Q ss_pred EEeCCCCceeeee-cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCC-EEEEeC
Q psy15612 3 LQSVSPGRQLQQH-DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGK-WFVSTG 78 (131)
Q Consensus 3 iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~-~~~~~~ 78 (131)
+.+..+.+....+ .+...|..++|+|..+ ++..++.+..+.+.|+++..+ .....+ ..+.+++|.-|.. +++.|.
T Consensus 177 ~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl 255 (463)
T KOG1645|consen 177 KLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGL 255 (463)
T ss_pred EeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEec
Confidence 3333333443333 5667799999999877 778889999999999998875 344444 7889999988654 677888
Q ss_pred CCCeEEEeeCCCCceE
Q psy15612 79 KDNLLNAWRTPYGASI 94 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~ 94 (131)
.+|.|.+||++..+..
T Consensus 256 ~nG~VlvyD~R~~~~~ 271 (463)
T KOG1645|consen 256 QNGMVLVYDMRQPEGP 271 (463)
T ss_pred cCceEEEEEccCCCch
Confidence 8999999999876654
No 306
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.41 E-value=7.6e-05 Score=44.91 Aligned_cols=106 Identities=12% Similarity=0.083 Sum_probs=68.5
Q ss_pred eEEEEEC-CCCCEEEEEeCCCcEEEEeCCCCCeEEeec------cccceEEEEEccCCCEEEEeCCC--------CeEEE
Q psy15612 21 IFSLGYC-PSGEWLAVGMENSNVEVLHALKPDKYQLHL------HESCVLSLRFAACGKWFVSTGKD--------NLLNA 85 (131)
Q Consensus 21 v~~~~~~-~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~--------~~i~~ 85 (131)
...+.+. +++. ++.+...+ +.++|..+++...+.. ....+.++++.|+|+..++.... +.+..
T Consensus 42 ~~G~~~~~~~g~-l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~ 119 (246)
T PF08450_consen 42 PNGMAFDRPDGR-LYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYR 119 (246)
T ss_dssp EEEEEEECTTSE-EEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEE
T ss_pred CceEEEEccCCE-EEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEE
Confidence 6677777 5654 44545544 5666988887533321 34568899999999977665432 45777
Q ss_pred eeCCCCceEEecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612 86 WRTPYGASIFQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV 129 (131)
Q Consensus 86 w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~ 129 (131)
++.. ++.......-.....++|+|+++.|+ +-+..+.|..+++
T Consensus 120 ~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~ 163 (246)
T PF08450_consen 120 IDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDL 163 (246)
T ss_dssp EETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEE
T ss_pred ECCC-CeEEEEecCcccccceEECCcchheeecccccceeEEEec
Confidence 7776 55543333456678999999998775 5556677777776
No 307
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.40 E-value=3.6e-05 Score=54.36 Aligned_cols=68 Identities=12% Similarity=0.163 Sum_probs=56.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEE----eCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVL----HALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAW 86 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w 86 (131)
+.|.++.+-++...++.+..+|.|.+. +........+..-...|.+++||||+..++..+.++++.+-
T Consensus 76 ~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~m 147 (928)
T PF04762_consen 76 DKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLM 147 (928)
T ss_pred CcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEE
Confidence 578999999999999999999999999 66666666666677899999999999999888777765544
No 308
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.35 E-value=0.00014 Score=44.89 Aligned_cols=117 Identities=15% Similarity=0.057 Sum_probs=82.4
Q ss_pred EEEeCCCCceeeee-cCCCCe--EEEEECCCCCEEEEEeC-----CCcEEEEeCC-CCC-eEEeeccccceEEEEEccCC
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQI--FSLGYCPSGEWLAVGME-----NSNVEVLHAL-KPD-KYQLHLHESCVLSLRFAACG 71 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v--~~~~~~~~~~~l~~~~~-----~~~v~~~~~~-~~~-~~~~~~~~~~v~~~~~~~~~ 71 (131)
.+||.++++....+ ...++- -.-.|+|||++|++... .|.|-+||.. +.+ +.++..+.-....+.+.|||
T Consensus 31 ~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG 110 (305)
T PF07433_consen 31 LVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDG 110 (305)
T ss_pred EEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCC
Confidence 57899999888776 323322 25678999999988644 4679999998 333 35566677778899999999
Q ss_pred CEEEEeCC------------------CCeEEEeeCCCCceE-E--e--cCCCCCeEEEEECCCCCEEEEe
Q psy15612 72 KWFVSTGK------------------DNLLNAWRTPYGASI-F--Q--SKESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 72 ~~~~~~~~------------------~~~i~~w~~~~~~~~-~--~--~~~~~~v~~~~~~~~~~~l~~~ 118 (131)
+.|+.+.. +..+...|..+|+.+ . + ..|.-.+..+++.++|..++..
T Consensus 111 ~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~ 180 (305)
T PF07433_consen 111 ETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAM 180 (305)
T ss_pred CEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEE
Confidence 87776522 123666777888877 2 2 2256789999999998765543
No 309
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.31 E-value=9.1e-05 Score=48.11 Aligned_cols=126 Identities=13% Similarity=0.109 Sum_probs=78.0
Q ss_pred EEEeCCCCceeeeec-CCCCeEEEEECCCCCEEEEE-----------eCCCcEEEEeCCCCCeEEeeccccceEEEEEcc
Q psy15612 2 YLQSVSPGRQLQQHD-FSSQIFSLGYCPSGEWLAVG-----------MENSNVEVLHALKPDKYQLHLHESCVLSLRFAA 69 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-----------~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (131)
++|.+..+..+.+.. .+..=..+.|++.|..+++- ....++.++++....+.....-.++|.+++|+|
T Consensus 205 ~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p 284 (561)
T COG5354 205 RILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEP 284 (561)
T ss_pred EEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecc
Confidence 455555444443321 12223468888888876542 113568888887655544335578999999999
Q ss_pred CCCEEEEe--CCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC---CcEEEEEe
Q psy15612 70 CGKWFVST--GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD---KKATVYEV 129 (131)
Q Consensus 70 ~~~~~~~~--~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vw~~ 129 (131)
+++.+++. -..-.+.++|++.. ..+. ...+.=..+.|+|.+++++.++-| |.+-+||.
T Consensus 285 ~S~~F~vi~g~~pa~~s~~~lr~N-l~~~-~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~ 347 (561)
T COG5354 285 LSSRFAVISGYMPASVSVFDLRGN-LRFY-FPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDP 347 (561)
T ss_pred cCCceeEEecccccceeecccccc-eEEe-cCCcccccccccCcccEEEEecCCccccceEEecc
Confidence 98877654 45667888888744 3322 233333456788888887765543 45666664
No 310
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.30 E-value=1.7e-06 Score=52.88 Aligned_cols=114 Identities=15% Similarity=0.165 Sum_probs=79.4
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeecc-----ccceEEEEEccCCC-EEEEeCCCCeEEE
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHLH-----ESCVLSLRFAACGK-WFVSTGKDNLLNA 85 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~-----~~~v~~~~~~~~~~-~~~~~~~~~~i~~ 85 (131)
.|..-+.++.++.|...++++ .+-.+.+|++.-.. +.-+..| ...|.+..|+|... .+..++..|.|++
T Consensus 170 aH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl 248 (460)
T COG5170 170 AHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKL 248 (460)
T ss_pred cceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEe
Confidence 366668899999888888876 45679999886433 1222233 34577889999644 4556677899999
Q ss_pred eeCCCCceE------E---e--------cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612 86 WRTPYGASI------F---Q--------SKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 86 w~~~~~~~~------~---~--------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 131 (131)
-|++..... + . .+-...|..+.|+++|+++++-+. -++++||++.
T Consensus 249 ~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm 310 (460)
T COG5170 249 NDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNM 310 (460)
T ss_pred hhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEeccc
Confidence 999843322 0 0 112466888999999999987654 4799999863
No 311
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.29 E-value=4.5e-05 Score=48.67 Aligned_cols=119 Identities=13% Similarity=0.064 Sum_probs=71.3
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-eecccc-ceEEEEEccCCCEEEEeCC
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-LHLHES-CVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~-~v~~~~~~~~~~~~~~~~~ 79 (131)
+.+|.++++.+....... ...+. ..+..++.++.++.+..+|..+++..- ...... ....... .+..++.++.
T Consensus 254 ~a~d~~tG~~~W~~~~~~-~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~ 328 (377)
T TIGR03300 254 AALDLRSGRVLWKRDASS-YQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDF 328 (377)
T ss_pred EEEECCCCcEEEeeccCC-ccCce--EeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeC
Confidence 567777777665553221 11111 246677778889999999998877421 111111 1111111 3668888899
Q ss_pred CCeEEEeeCCCCceE-EecCCCCC-eEEEEECCCCCEEEEecCCCcEEEE
Q psy15612 80 DNLLNAWRTPYGASI-FQSKESSS-VLSCDISADDKYIVTGSGDKKATVY 127 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~-~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~vw 127 (131)
++.+.++|..+|+.+ ....+... .....+. +..|+.++.||.+..+
T Consensus 329 ~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~--~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 329 EGYLHWLSREDGSFVARLKTDGSGIASPPVVV--GDGLLVQTRDGDLYAF 376 (377)
T ss_pred CCEEEEEECCCCCEEEEEEcCCCccccCCEEE--CCEEEEEeCCceEEEe
Confidence 999999999999988 33223322 2223332 3447778889887654
No 312
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.29 E-value=9.3e-05 Score=49.72 Aligned_cols=89 Identities=12% Similarity=0.113 Sum_probs=63.9
Q ss_pred EEEeCCC-----CceeeeecCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCe------------EEeeccccceE
Q psy15612 2 YLQSVSP-----GRQLQQHDFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPDK------------YQLHLHESCVL 63 (131)
Q Consensus 2 ~iwd~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~------------~~~~~~~~~v~ 63 (131)
.+.|.++ .+.+..+......-.+.++|||+++++++. +.++.++|+.+.+. .....-.....
T Consensus 299 ~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPL 378 (635)
T PRK02888 299 PVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPL 378 (635)
T ss_pred EEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcc
Confidence 4667666 344555567777888999999998876644 78899999986441 11111234466
Q ss_pred EEEEccCCCEEEEeCCCCeEEEeeCCC
Q psy15612 64 SLRFAACGKWFVSTGKDNLLNAWRTPY 90 (131)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~i~~w~~~~ 90 (131)
..+|.++|+...+---|..+..|++.+
T Consensus 379 HTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 379 HTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred eEEECCCCCEEEeEeecceeEEEehHH
Confidence 788999998777777788999999875
No 313
>KOG0309|consensus
Probab=98.28 E-value=6.8e-06 Score=55.54 Aligned_cols=90 Identities=14% Similarity=0.184 Sum_probs=63.8
Q ss_pred EEEEeCCCCC---e-EEeeccccceEEEEEccCCC-EEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCE
Q psy15612 42 VEVLHALKPD---K-YQLHLHESCVLSLRFAACGK-WFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKY 114 (131)
Q Consensus 42 v~~~~~~~~~---~-~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~ 114 (131)
-.+|++.... + ..+.+|...+.++.|+|+.+ .+++++-|..+..||+++.... ....-......++|+....-
T Consensus 93 aiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~ 172 (1081)
T KOG0309|consen 93 AIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPN 172 (1081)
T ss_pred hhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcc
Confidence 4456654322 1 34578899999999999655 6788899999999999987765 22234455678999875444
Q ss_pred EEEecCCCcEEEEEeeC
Q psy15612 115 IVTGSGDKKATVYEVIY 131 (131)
Q Consensus 115 l~~~~~d~~i~vw~~~~ 131 (131)
+...+..+.+.+||++|
T Consensus 173 vlasshg~~i~vwd~r~ 189 (1081)
T KOG0309|consen 173 VLASSHGNDIFVWDLRK 189 (1081)
T ss_pred hhhhccCCceEEEeccC
Confidence 44455667899999986
No 314
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.26 E-value=6.7e-06 Score=33.83 Aligned_cols=33 Identities=24% Similarity=0.427 Sum_probs=29.0
Q ss_pred ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 96 QSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
...+...+.+++|++.++.+++++.|+.+++|+
T Consensus 8 ~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 8 LKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 345677899999999999999999999999996
No 315
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.26 E-value=7.8e-06 Score=33.60 Aligned_cols=37 Identities=16% Similarity=0.459 Sum_probs=31.2
Q ss_pred ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEe
Q psy15612 10 RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLH 46 (131)
Q Consensus 10 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~ 46 (131)
+.+..+ .+...+.++.|++.+..+++++.++.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 444455 5778899999999999999999999999985
No 316
>KOG1275|consensus
Probab=98.25 E-value=2.4e-05 Score=53.99 Aligned_cols=122 Identities=8% Similarity=0.104 Sum_probs=78.5
Q ss_pred EEeCCCCceeeeecCCC-CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC-
Q psy15612 3 LQSVSPGRQLQQHDFSS-QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK- 79 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~- 79 (131)
-+|+++.+..+...... .|.-|+. +++.+.+|...|+|.+-|..+.+. .++.+|.+.+.++.. .|+.+++++.
T Consensus 161 ~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv--~GNlLitCG~S 236 (1118)
T KOG1275|consen 161 HIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV--QGNLLITCGYS 236 (1118)
T ss_pred eeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec--cCCeEEEeecc
Confidence 35666666655553332 4666654 678999999999999999998874 788999999888765 5899888765
Q ss_pred --------CCeEEEeeCCCCceEEecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEE
Q psy15612 80 --------DNLLNAWRTPYGASIFQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYE 128 (131)
Q Consensus 80 --------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~ 128 (131)
|..+++||++.-+.+.-........-+.|+|. ...++..+..|...+-|
T Consensus 237 ~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd 294 (1118)
T KOG1275|consen 237 MRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVD 294 (1118)
T ss_pred cccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeecc
Confidence 44589999987665522222222233444543 22344444445544443
No 317
>KOG4640|consensus
Probab=98.25 E-value=1.3e-05 Score=53.03 Aligned_cols=70 Identities=13% Similarity=0.097 Sum_probs=57.6
Q ss_pred ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC-CCCCeE-EEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVL-SCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~-~~~~v~-~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
...+..+.|+|.-..+|.+..+|.+.+.... .+.+...+ ++..+. +++|.|||+.++.|-.||+|++.|+
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dv 91 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDV 91 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEc
Confidence 4467789999999999999999988887776 55553333 555555 9999999999999999999999986
No 318
>KOG1645|consensus
Probab=98.19 E-value=1.7e-05 Score=49.97 Aligned_cols=77 Identities=16% Similarity=0.165 Sum_probs=62.0
Q ss_pred eeccccceEEEEEccCCC-EEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEeeC
Q psy15612 55 LHLHESCVLSLRFAACGK-WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 55 ~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~~ 131 (131)
+..+...|.+++|||..+ .+..++.++.|++.|+++............+++++|.-+. ++++.|-..|.|.++|++.
T Consensus 189 lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~ 267 (463)
T KOG1645|consen 189 LPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQ 267 (463)
T ss_pred ccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCceEEEEEccC
Confidence 456677899999999877 5778899999999999987776333334788999998764 5678888899999999873
No 319
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.19 E-value=2.7e-05 Score=49.38 Aligned_cols=77 Identities=12% Similarity=0.179 Sum_probs=53.1
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccc------------------cceE
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHE------------------SCVL 63 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~------------------~~v~ 63 (131)
.++|+++++..........+....|+|+|+.++... ++.|.+.+..++...++.... ..-.
T Consensus 26 ~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~ 104 (353)
T PF00930_consen 26 YIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRS 104 (353)
T ss_dssp EEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSB
T ss_pred EEEecCCCceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceecccccccccc
Confidence 578999887666554467889999999999998875 467999988776544332111 1234
Q ss_pred EEEEccCCCEEEEeCC
Q psy15612 64 SLRFAACGKWFVSTGK 79 (131)
Q Consensus 64 ~~~~~~~~~~~~~~~~ 79 (131)
.+-||||+++|+....
T Consensus 105 ~~~WSpd~~~la~~~~ 120 (353)
T PF00930_consen 105 AVWWSPDSKYLAFLRF 120 (353)
T ss_dssp SEEE-TTSSEEEEEEE
T ss_pred ceEECCCCCEEEEEEE
Confidence 6889999999886533
No 320
>KOG2079|consensus
Probab=98.18 E-value=2.9e-05 Score=54.46 Aligned_cols=100 Identities=11% Similarity=0.145 Sum_probs=70.7
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCC---CC
Q psy15612 29 SGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKES---SS 102 (131)
Q Consensus 29 ~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~---~~ 102 (131)
.+..++.|+..|.+...|..+.-. ..-....++|.+++|+.+|+.++.|-.+|.|.+||+..++.. ....++ ..
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 455678888888888888876533 222334678999999999999999999999999999988776 333333 33
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 103 VLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 103 v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+..+.+..++..+.++...|. +|++.
T Consensus 178 vi~v~~t~~nS~llt~D~~Gs--f~~lv 203 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDTGGS--FWKLV 203 (1206)
T ss_pred EEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence 444444445556667665554 77764
No 321
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.17 E-value=0.00031 Score=45.91 Aligned_cols=122 Identities=13% Similarity=0.127 Sum_probs=69.6
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC------------CeEEeeccccceEEEEEc
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP------------DKYQLHLHESCVLSLRFA 68 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~------------~~~~~~~~~~~v~~~~~~ 68 (131)
|.+||+++++.+..+.... |..+.|++++.+++..+.+ .+.+.+.... ....+..-...|.+..|.
T Consensus 128 i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~ 205 (443)
T PF04053_consen 128 ICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWV 205 (443)
T ss_dssp EEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEE
T ss_pred EEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEE
Confidence 4689999999999887664 8999999999999988765 5777665433 233333335678889998
Q ss_pred cCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 69 ~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+ .++-.... .++. +..|+.-....-..++.=+...|..+.+.....|+.+..+.+
T Consensus 206 ~d--~fiYtT~~-~lkY--l~~Ge~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~l 261 (443)
T PF04053_consen 206 ED--CFIYTTSN-HLKY--LVNGETGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYEL 261 (443)
T ss_dssp TT--EEEEE-TT-EEEE--EETTEEEEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE-
T ss_pred cC--EEEEEcCC-eEEE--EEcCCcceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEEE
Confidence 66 44444434 6665 444555433333456666777777778888888888777654
No 322
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.17 E-value=0.00051 Score=44.16 Aligned_cols=128 Identities=12% Similarity=0.087 Sum_probs=86.1
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
.+.|..+.+.............++++|+++.+..+.. ++++.+.|..+........-......+++.|+|..++...
T Consensus 99 ~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~ 178 (381)
T COG3391 99 SVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTPTGVAVDPDGNKVYVTN 178 (381)
T ss_pred EEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCcceEEECCCCCeEEEEe
Confidence 4556566666655544447788999999988877655 6788888988877633222222338999999999776654
Q ss_pred -CCCeEEEeeCCCCceEE-----ecCCCCCeEEEEECCCCCEEEEecCC---CcEEEEEe
Q psy15612 79 -KDNLLNAWRTPYGASIF-----QSKESSSVLSCDISADDKYIVTGSGD---KKATVYEV 129 (131)
Q Consensus 79 -~~~~i~~w~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vw~~ 129 (131)
.++.+.+.|..+..... ..........+.++|+|+++...... +.+...|.
T Consensus 179 ~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~ 238 (381)
T COG3391 179 SDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDT 238 (381)
T ss_pred cCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeC
Confidence 67889999966544332 23344556788999999977655433 35655553
No 323
>KOG1920|consensus
Probab=98.14 E-value=0.00027 Score=50.36 Aligned_cols=67 Identities=6% Similarity=0.009 Sum_probs=56.7
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEE
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNA 85 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~ 85 (131)
..|.++.|..++..++.+...|.+.+.|..+........-...|.++.||||+..++..+...++.+
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~ 135 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLF 135 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEE
Confidence 4789999999999999999999999999888877666667788999999999999888777666544
No 324
>KOG1008|consensus
Probab=98.14 E-value=1.3e-06 Score=57.84 Aligned_cols=129 Identities=9% Similarity=0.116 Sum_probs=83.3
Q ss_pred CEEEeCCCC--cee--eee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEcc-CCCE
Q psy15612 1 MYLQSVSPG--RQL--QQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAA-CGKW 73 (131)
Q Consensus 1 i~iwd~~~~--~~~--~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 73 (131)
+.|||..++ .+. ..+ +......+++|..+.+.+.+|.....+.++|++........-....+..+...| .+.+
T Consensus 131 ~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY 210 (783)
T KOG1008|consen 131 LKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNY 210 (783)
T ss_pred ccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCc
Confidence 468998765 222 122 234456688888888889999888899999998544322222233455677777 6777
Q ss_pred EEEeCCCCeEEEee-CCCCceE-Ee-----cCCCCCeEEEEECCCCC-EEEEecC-CCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWR-TPYGASI-FQ-----SKESSSVLSCDISADDK-YIVTGSG-DKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~-~~~~~~~-~~-----~~~~~~v~~~~~~~~~~-~l~~~~~-d~~i~vw~~~ 130 (131)
+++.. |+.+.+|| .++-+.. .. ......+..++|.|..+ .+++... .++|+.+|+.
T Consensus 211 ~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 211 FCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred eeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 77666 99999999 4443332 11 12334589999999644 3444444 4678888864
No 325
>KOG2066|consensus
Probab=98.11 E-value=5.9e-05 Score=51.34 Aligned_cols=98 Identities=16% Similarity=0.108 Sum_probs=74.1
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCC
Q psy15612 20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKE 99 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~ 99 (131)
.+.++++ .+++++.|...|.+++++..... .+...|.+. ..+|.++++++.||++.+..+.+.+.......
T Consensus 41 ~is~~av--~~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df 111 (846)
T KOG2066|consen 41 AISCCAV--HDKFFALGTHRGAVYLTTCQGNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYDF 111 (846)
T ss_pred HHHHHHh--hcceeeeccccceEEEEecCCcc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEec
Confidence 3445555 47789999999999999887654 333444433 56799999999999999999888887766666
Q ss_pred CCCeEEEEECCC-----CCEEEEecCCCcEEEE
Q psy15612 100 SSSVLSCDISAD-----DKYIVTGSGDKKATVY 127 (131)
Q Consensus 100 ~~~v~~~~~~~~-----~~~l~~~~~d~~i~vw 127 (131)
..++.+++++|+ .+.+++|+..| +.++
T Consensus 112 ~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~ 143 (846)
T KOG2066|consen 112 KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLS 143 (846)
T ss_pred CCcceeEEeccchhhhhhhheeecCcce-EEEe
Confidence 778889999997 56788888776 5544
No 326
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.07 E-value=0.00069 Score=41.94 Aligned_cols=130 Identities=16% Similarity=0.135 Sum_probs=84.5
Q ss_pred CEEEeCC-CCceeeee-cCCCCeEEEEECCCCCEEEEEeC------------------CCcEEEEeCCCCCe-EE--e--
Q psy15612 1 MYLQSVS-PGRQLQQH-DFSSQIFSLGYCPSGEWLAVGME------------------NSNVEVLHALKPDK-YQ--L-- 55 (131)
Q Consensus 1 i~iwd~~-~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~------------------~~~v~~~~~~~~~~-~~--~-- 55 (131)
|-+||.+ +.+.+..+ .+.-..-.+.+.|||+.|+.+.. +..+...|..++++ .+ +
T Consensus 79 IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~ 158 (305)
T PF07433_consen 79 IGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPP 158 (305)
T ss_pred EEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCc
Confidence 4578888 55666666 45555667888999988876532 23456667777774 22 3
Q ss_pred eccccceEEEEEccCCCEEEEeCCCCe-------EEEeeCCCCceEE------ecCCCCCeEEEEECCCCCEEEEecC-C
Q psy15612 56 HLHESCVLSLRFAACGKWFVSTGKDNL-------LNAWRTPYGASIF------QSKESSSVLSCDISADDKYIVTGSG-D 121 (131)
Q Consensus 56 ~~~~~~v~~~~~~~~~~~~~~~~~~~~-------i~~w~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~~-d 121 (131)
.-|...+..+++.++|..++.....+. +-+++....-... .....+-+-++++++++.+++.++. .
T Consensus 159 ~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrG 238 (305)
T PF07433_consen 159 DLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRG 238 (305)
T ss_pred cccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCC
Confidence 336778999999999987776544332 3334332211111 1124577899999999998866654 7
Q ss_pred CcEEEEEee
Q psy15612 122 KKATVYEVI 130 (131)
Q Consensus 122 ~~i~vw~~~ 130 (131)
+.+.+||..
T Consensus 239 g~~~~~d~~ 247 (305)
T PF07433_consen 239 GRVAVWDAA 247 (305)
T ss_pred CEEEEEECC
Confidence 789999853
No 327
>KOG1920|consensus
Probab=98.06 E-value=0.00023 Score=50.72 Aligned_cols=129 Identities=14% Similarity=0.101 Sum_probs=78.1
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEe---CCCcEEEEeCCCCCeE----EeeccccceEEEEEccCCC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGM---ENSNVEVLHALKPDKY----QLHLHESCVLSLRFAACGK 72 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~---~~~~v~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~ 72 (131)
|++||.+ |..-..- ...+.-.+++|-|.|..+++.. .++.|.+|.-.+-+.. ........+..++|+.++.
T Consensus 224 irV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sd 302 (1265)
T KOG1920|consen 224 IRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSD 302 (1265)
T ss_pred EEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCC
Confidence 4677766 4333222 2334456899999999988753 3556888887654422 2233344588999999999
Q ss_pred EEEE---eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEeeC
Q psy15612 73 WFVS---TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 73 ~~~~---~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~~ 131 (131)
.++. ......+++|...+-..- .....+.... +.|+|... .+.....+|...++++.|
T Consensus 303 iLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~-~~W~p~~~~~L~v~~~sG~~~v~~~~~ 366 (1265)
T KOG1920|consen 303 ILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL-LMWDPVTEKTLHVLRESGQRLVRDFAW 366 (1265)
T ss_pred ceeeeecccccceEEEEEecCeEEEEEEEEecccccc-ccccCCCceeEEEEecCCcEEEEEEEE
Confidence 8887 444555999998876654 1111222222 77887432 233333566766666543
No 328
>KOG2395|consensus
Probab=98.05 E-value=0.00077 Score=44.47 Aligned_cols=124 Identities=14% Similarity=0.230 Sum_probs=83.7
Q ss_pred EEeCCCCceeeeecCCCCeEEEEECCCCCE--E-----EEEeCCCcEEEEeCCCCCe---EEeecc----ccceEEEEEc
Q psy15612 3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEW--L-----AVGMENSNVEVLHALKPDK---YQLHLH----ESCVLSLRFA 68 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~--l-----~~~~~~~~v~~~~~~~~~~---~~~~~~----~~~v~~~~~~ 68 (131)
--|++.|+.+........|.-+.+.|+.+. + +.|-.+..|.-||.+-... .....| .....|.+-.
T Consensus 360 klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT 439 (644)
T KOG2395|consen 360 KLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATT 439 (644)
T ss_pred eeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccceeeec
Confidence 347788888877766666777888886442 2 3456677899999873221 111221 2234455555
Q ss_pred cCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 69 ACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 69 ~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+| +++.++.+|.|++||- .+..- .+.+.+..|..+..+.+|++++..+.. .+.+-++
T Consensus 440 ~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~t-yLlLi~t 499 (644)
T KOG2395|consen 440 ESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCKT-YLLLIDT 499 (644)
T ss_pred CCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEeccc-EEEEEEE
Confidence 444 6888999999999997 44443 566788999999999999999877753 4555554
No 329
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.05 E-value=0.00091 Score=42.82 Aligned_cols=90 Identities=22% Similarity=0.255 Sum_probs=56.1
Q ss_pred EEEeCCCCceeeeecCCCCeE-EEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIF-SLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
..+|..+|+.+........+. ... .++..++.++.++.+..+|..+++..-.......+.+.-.. .+..++.++.+
T Consensus 78 ~a~d~~tG~~~W~~~~~~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v-~~~~v~v~~~~ 154 (377)
T TIGR03300 78 VALDAETGKRLWRVDLDERLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPLV-ANGLVVVRTND 154 (377)
T ss_pred EEEEccCCcEeeeecCCCCcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCEE-ECCEEEEECCC
Confidence 456777888776654333322 121 24667778888999999999888753221112222111011 24566677789
Q ss_pred CeEEEeeCCCCceE
Q psy15612 81 NLLNAWRTPYGASI 94 (131)
Q Consensus 81 ~~i~~w~~~~~~~~ 94 (131)
+.+..+|..+|+.+
T Consensus 155 g~l~a~d~~tG~~~ 168 (377)
T TIGR03300 155 GRLTALDAATGERL 168 (377)
T ss_pred CeEEEEEcCCCcee
Confidence 99999999999887
No 330
>KOG1832|consensus
Probab=98.02 E-value=1.3e-05 Score=55.51 Aligned_cols=112 Identities=15% Similarity=0.243 Sum_probs=80.8
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCC--eEEEeeCCC-C
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDN--LLNAWRTPY-G 91 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~~w~~~~-~ 91 (131)
.+...-.+++|+.+.++|+.|...|.++++++.++.. ....+|.+.+.-+.=+.||..+++.+.-. ...+|++.. +
T Consensus 1099 d~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~ 1178 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTG 1178 (1516)
T ss_pred ccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcccccc
Confidence 5777889999999999999999999999999998875 66788999999998888999877654332 466898764 1
Q ss_pred ceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 92 ASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
..... -..-.++.|+.....-+.|.....+.+||++
T Consensus 1179 ~~~Hs---f~ed~~vkFsn~~q~r~~gt~~d~a~~YDvq 1214 (1516)
T KOG1832|consen 1179 GPRHS---FDEDKAVKFSNSLQFRALGTEADDALLYDVQ 1214 (1516)
T ss_pred Ccccc---ccccceeehhhhHHHHHhcccccceEEEecc
Confidence 11111 1223466676654444445555567788764
No 331
>KOG0882|consensus
Probab=98.00 E-value=0.00043 Score=44.67 Aligned_cols=94 Identities=21% Similarity=0.237 Sum_probs=72.2
Q ss_pred EeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCC------CceEEe----------
Q psy15612 36 GMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY------GASIFQ---------- 96 (131)
Q Consensus 36 ~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~------~~~~~~---------- 96 (131)
...++.+.++|-....+ ....-|.++|..+.+++-+..+.+....|.|.-|.... .+....
T Consensus 118 ~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f 197 (558)
T KOG0882|consen 118 LFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGF 197 (558)
T ss_pred cccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcc
Confidence 34578899999865542 33456889999999999999999998899999998762 111111
Q ss_pred cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 97 SKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 97 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
........++.|+|++..+.+.+.|.+|+++++
T Consensus 198 ~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~ 230 (558)
T KOG0882|consen 198 PKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVF 230 (558)
T ss_pred cccccCccceEEccccCcccccCcccEEEEEEe
Confidence 123566789999999999999999999999876
No 332
>KOG2444|consensus
Probab=97.96 E-value=0.00011 Score=43.24 Aligned_cols=102 Identities=13% Similarity=0.064 Sum_probs=68.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCC--CeEEeeccccceEEE-EEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCC-CCe
Q psy15612 29 SGEWLAVGMENSNVEVLHALKP--DKYQLHLHESCVLSL-RFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKES-SSV 103 (131)
Q Consensus 29 ~~~~l~~~~~~~~v~~~~~~~~--~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~-~~v 103 (131)
.+..+++|+.++.+.+|..... .......-...+.++ .--.++.+.++++.++.|+.|+..-.+.+ ....|+ ...
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~ 148 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESG 148 (238)
T ss_pred cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCc
Confidence 3567888999999999887522 111111112222222 22224567889999999999999888877 555566 566
Q ss_pred EEEEECCCCCEEEEe--cCCCcEEEEEee
Q psy15612 104 LSCDISADDKYIVTG--SGDKKATVYEVI 130 (131)
Q Consensus 104 ~~~~~~~~~~~l~~~--~~d~~i~vw~~~ 130 (131)
.....+..++.+.++ |.|..++.|++.
T Consensus 149 e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 149 EELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred ceeEEecCCceEEeeccccchhhhhcchh
Confidence 666667777877777 788888888874
No 333
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.92 E-value=0.0013 Score=44.75 Aligned_cols=106 Identities=11% Similarity=0.059 Sum_probs=64.1
Q ss_pred CeEEEEECCCCCEEEEEeCC------------CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEE--
Q psy15612 20 QIFSLGYCPSGEWLAVGMEN------------SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNA-- 85 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~------------~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~-- 85 (131)
......|+|+|..+.+.... +.+.+.++..+.... .....|..+.|||||..++... ++.+.+
T Consensus 398 ~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~ 474 (591)
T PRK13616 398 SLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYLAV 474 (591)
T ss_pred CCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEEEE
Confidence 47789999998887776432 122222333333221 2345799999999999887655 456666
Q ss_pred -eeCCCCceEE-----ec-CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 86 -WRTPYGASIF-----QS-KESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 86 -w~~~~~~~~~-----~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
-....|.... +. .....+..+.|.+++.++ .+..++...+|.+
T Consensus 475 Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v 524 (591)
T PRK13616 475 VEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYV 524 (591)
T ss_pred EEeCCCCceeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEE
Confidence 4444554221 11 233446889999998865 4444454556654
No 334
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.87 E-value=0.00077 Score=43.71 Aligned_cols=95 Identities=17% Similarity=0.191 Sum_probs=60.1
Q ss_pred EEEEECCCCCEEEEE-eCC----CcEEEEeCCCCCeEE--eeccccceEEEEEccCCCEEEEeCC-----------CCeE
Q psy15612 22 FSLGYCPSGEWLAVG-MEN----SNVEVLHALKPDKYQ--LHLHESCVLSLRFAACGKWFVSTGK-----------DNLL 83 (131)
Q Consensus 22 ~~~~~~~~~~~l~~~-~~~----~~v~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~-----------~~~i 83 (131)
....++|++++++.+ +.. ..++++|+.+++... +... ....+.|.++++.|+.... ...+
T Consensus 127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v 204 (414)
T PF02897_consen 127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV 204 (414)
T ss_dssp EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence 467889999998765 333 359999999887422 2221 1223999999887765432 2337
Q ss_pred EEeeCCCCce---E-EecCCCCC-eEEEEECCCCCEEEEe
Q psy15612 84 NAWRTPYGAS---I-FQSKESSS-VLSCDISADDKYIVTG 118 (131)
Q Consensus 84 ~~w~~~~~~~---~-~~~~~~~~-v~~~~~~~~~~~l~~~ 118 (131)
+.|.+.++.. + +....... ...+..++++++++..
T Consensus 205 ~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~ 244 (414)
T PF02897_consen 205 YRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFIS 244 (414)
T ss_dssp EEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEE
T ss_pred EEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEE
Confidence 7788776543 2 33333444 6788899999987653
No 335
>KOG3617|consensus
Probab=97.87 E-value=1.9e-05 Score=54.42 Aligned_cols=71 Identities=18% Similarity=0.248 Sum_probs=61.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP 89 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~ 89 (131)
-.+.+++|+|..-.|+.|-.-|.+.+|...+.+...+ ..|+.++..+.|||+|..+.++..-+.+.+|...
T Consensus 60 ~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 60 VHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred eehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 3467899999988899998889999999988776554 5689999999999999999999999999999754
No 336
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.87 E-value=0.0008 Score=45.65 Aligned_cols=103 Identities=11% Similarity=-0.032 Sum_probs=61.4
Q ss_pred CCeEEEEECCCCCEEEEEe------CCC--cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC-CeEEEe---
Q psy15612 19 SQIFSLGYCPSGEWLAVGM------ENS--NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD-NLLNAW--- 86 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~------~~~--~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~w--- 86 (131)
..+...+++|+|+.++... .++ .+.+.+..... ..+..-. ....-.|+|||+.+.+.... ...++.
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~-~~lt~g~-~~t~PsWspDG~~lw~v~dg~~~~~v~~~~ 427 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVA-VQVLEGH-SLTRPSWSLDADAVWVVVDGNTVVRVIRDP 427 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcc-eeeecCC-CCCCceECCCCCceEEEecCcceEEEeccC
Confidence 3577889999999887654 233 45555543322 3332222 36788999998877766433 222222
Q ss_pred --------eCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy15612 87 --------RTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATV 126 (131)
Q Consensus 87 --------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 126 (131)
++..++... ...+.|..+.|||||..++... ++++.+
T Consensus 428 ~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 428 ATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred CCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 332222111 2356799999999999887655 355554
No 337
>KOG0882|consensus
Probab=97.85 E-value=0.0009 Score=43.28 Aligned_cols=79 Identities=15% Similarity=0.106 Sum_probs=64.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC------CCe----------EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK------PDK----------YQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~------~~~----------~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
-|..+|..+.++|.+....+....|.|.-|.... .++ ..+...+....++.|+|+|..+.+-+.
T Consensus 142 lH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~ 221 (558)
T KOG0882|consen 142 LHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNP 221 (558)
T ss_pred cccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCc
Confidence 4788999999999999999999999999999873 111 112345667889999999999999999
Q ss_pred CCeEEEeeCCCCceE
Q psy15612 80 DNLLNAWRTPYGASI 94 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~ 94 (131)
|..|++++..+|+..
T Consensus 222 DrkVR~F~~KtGklv 236 (558)
T KOG0882|consen 222 DRKVRGFVFKTGKLV 236 (558)
T ss_pred ccEEEEEEeccchhh
Confidence 999999999888664
No 338
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=97.85 E-value=0.00032 Score=43.34 Aligned_cols=113 Identities=13% Similarity=0.255 Sum_probs=78.4
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-e-----EEeeccc------------cceEEEEEccCC--CEEEE
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-K-----YQLHLHE------------SCVLSLRFAACG--KWFVS 76 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~-----~~~~~~~------------~~v~~~~~~~~~--~~~~~ 76 (131)
....|.++.|...|.++++|...|.|.+|.-.... + ..++.|. ..|..+.|..++ ..++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 44679999999999999999999999999875433 2 1233333 345667877653 35778
Q ss_pred eCCCCeEEEeeCCCCceE--------------------------------------------EecCCCCCeEEEEECCCC
Q psy15612 77 TGKDNLLNAWRTPYGASI--------------------------------------------FQSKESSSVLSCDISADD 112 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~--------------------------------------------~~~~~~~~v~~~~~~~~~ 112 (131)
.+.|.+|++|-+...... ....|+..+.+++++.+.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 888999999975422000 011356667889998887
Q ss_pred CEEEEecCCCcEEEEEee
Q psy15612 113 KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 113 ~~l~~~~~d~~i~vw~~~ 130 (131)
..++++ .|=.|.+|++.
T Consensus 185 et~lSa-DdLrINLWnl~ 201 (460)
T COG5170 185 ETLLSA-DDLRINLWNLE 201 (460)
T ss_pred heeeec-cceeeeecccc
Confidence 777665 46678999863
No 339
>KOG4190|consensus
Probab=97.82 E-value=2.9e-05 Score=51.24 Aligned_cols=94 Identities=15% Similarity=0.049 Sum_probs=63.6
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECC--CCCEE-EEEeCCCcEEEEeCCCCCe-E--Ee---eccccceEEEEEc
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCP--SGEWL-AVGMENSNVEVLHALKPDK-Y--QL---HLHESCVLSLRFA 68 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~--~~~~l-~~~~~~~~v~~~~~~~~~~-~--~~---~~~~~~v~~~~~~ 68 (131)
|.+||-=-++.+... ...+.+..+..-| +...+ +.++...+|+++|.+..+- . ++ ......+.+++..
T Consensus 806 iHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa 885 (1034)
T KOG4190|consen 806 IHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVA 885 (1034)
T ss_pred ceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEec
Confidence 567886666665533 1112222222222 33343 3447788999999987762 1 11 3345678899999
Q ss_pred cCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 69 ACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 69 ~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
+.|++++.+-..|.+.+.|.++|+.+
T Consensus 886 ~~GN~lAa~LSnGci~~LDaR~G~vI 911 (1034)
T KOG4190|consen 886 DKGNKLAAALSNGCIAILDARNGKVI 911 (1034)
T ss_pred cCcchhhHHhcCCcEEEEecCCCcee
Confidence 99999999999999999999999876
No 340
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.81 E-value=0.0029 Score=40.79 Aligned_cols=109 Identities=10% Similarity=0.098 Sum_probs=77.6
Q ss_pred eEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC---CCeEEEeeCCCCceEEe
Q psy15612 21 IFSLGYCPSGEWLA-VGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK---DNLLNAWRTPYGASIFQ 96 (131)
Q Consensus 21 v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~i~~w~~~~~~~~~~ 96 (131)
...++.++.+..+. ....+..+.+.|..+...............++++|+++.+..+.. ++.+.+.|..+.+....
T Consensus 76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~ 155 (381)
T COG3391 76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTAT 155 (381)
T ss_pred ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEE
Confidence 34667777777544 444567899999877776444333347789999999988776644 68899999988887733
Q ss_pred cCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEe
Q psy15612 97 SKESSSVLSCDISADDKYIVTGS-GDKKATVYEV 129 (131)
Q Consensus 97 ~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~ 129 (131)
...+.....++++|+|+.++... .++.+.+.|.
T Consensus 156 ~~vG~~P~~~a~~p~g~~vyv~~~~~~~v~vi~~ 189 (381)
T COG3391 156 IPVGNTPTGVAVDPDGNKVYVTNSDDNTVSVIDT 189 (381)
T ss_pred EecCCCcceEEECCCCCeEEEEecCCCeEEEEeC
Confidence 43333348999999999776554 5778887764
No 341
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.80 E-value=0.0026 Score=39.95 Aligned_cols=112 Identities=12% Similarity=0.131 Sum_probs=69.6
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCC-Cc-
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY-GA- 92 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~-~~- 92 (131)
...++|.+++-- ++. ++.+. ...+.+|++...+ ......+...+..+.....+++++.+.....+.++.... +.
T Consensus 86 ~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~ 162 (321)
T PF03178_consen 86 EVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDEENNK 162 (321)
T ss_dssp EESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEETTTE-
T ss_pred eecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEccCCE
Confidence 567888888766 444 44443 4689999998777 544333333333333344467888888877777764433 22
Q ss_pred eE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 93 SI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 93 ~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.. .....+..+.++.+-++++.++.+..+|.+.++...
T Consensus 163 l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 163 LILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred EEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 22 222345667888887666788888889999887653
No 342
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.79 E-value=0.00022 Score=31.56 Aligned_cols=32 Identities=22% Similarity=0.258 Sum_probs=28.6
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 98 KESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 98 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.....|..++|+|...+++.+..+|.|.++.+
T Consensus 9 ~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 9 NLPSRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 34567999999999999999999999999876
No 343
>KOG4649|consensus
Probab=97.78 E-value=0.0024 Score=38.80 Aligned_cols=81 Identities=14% Similarity=0.204 Sum_probs=55.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC-CCCCeEEEE
Q psy15612 30 GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCD 107 (131)
Q Consensus 30 ~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~-~~~~v~~~~ 107 (131)
|.+++.|...+.+++.+..++.. -.+.....-=......+++..+..++.|++.+..|.++..++.... .++...+.+
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~ 142 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPV 142 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccce
Confidence 66788899999999999998864 3322222111234456789999999999999999999888873333 333334445
Q ss_pred ECC
Q psy15612 108 ISA 110 (131)
Q Consensus 108 ~~~ 110 (131)
..|
T Consensus 143 i~~ 145 (354)
T KOG4649|consen 143 IAP 145 (354)
T ss_pred ecC
Confidence 555
No 344
>KOG1912|consensus
Probab=97.78 E-value=0.00016 Score=49.60 Aligned_cols=99 Identities=19% Similarity=0.254 Sum_probs=77.8
Q ss_pred EEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEe---------CCCCeEEEeeCCCCceE-E---ec
Q psy15612 32 WLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVST---------GKDNLLNAWRTPYGASI-F---QS 97 (131)
Q Consensus 32 ~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~---------~~~~~i~~w~~~~~~~~-~---~~ 97 (131)
.++.|...|+|.++|+.++.+ ..+..|...|.++.|-...+.+-.+ +..+.+.+-|+++|... + ..
T Consensus 439 LvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~ 518 (1062)
T KOG1912|consen 439 LVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQK 518 (1062)
T ss_pred eEEeecCCceEEEEEecchhhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCC
Confidence 467889999999999998886 5567799999999997655443222 22345788899998776 2 34
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 98 KESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 98 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
....+|..+..+..++|++..-.+.-+-+||++
T Consensus 519 ~despI~~irvS~~~~yLai~Fr~~plEiwd~k 551 (1062)
T KOG1912|consen 519 PDESPIRAIRVSSSGRYLAILFRREPLEIWDLK 551 (1062)
T ss_pred CCcCcceeeeecccCceEEEEecccchHHHhhc
Confidence 467889999999999999999999999999873
No 345
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.78 E-value=0.00047 Score=30.50 Aligned_cols=34 Identities=24% Similarity=0.512 Sum_probs=29.8
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK 49 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~ 49 (131)
.....|..+.|+|...+++.+..+|.|.++.+..
T Consensus 9 ~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~~ 42 (47)
T PF12894_consen 9 NLPSRVSCMSWCPTMDLIALGTEDGEVLVYRLNW 42 (47)
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEECCC
Confidence 3456799999999999999999999999998843
No 346
>KOG2114|consensus
Probab=97.76 E-value=0.0038 Score=43.49 Aligned_cols=110 Identities=12% Similarity=0.068 Sum_probs=75.2
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCC--CCC---eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612 18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHAL--KPD---KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA 92 (131)
Q Consensus 18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~--~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 92 (131)
+.++.+++.+.+-+.+++|..+|.|..+.-. ..+ ..-......+|+.+++..+++..+.......|.+|.+....
T Consensus 125 ~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~ 204 (933)
T KOG2114|consen 125 PSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRT 204 (933)
T ss_pred CCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCC
Confidence 4568899999999999999999999988532 111 12223446789999999998874444445668888887433
Q ss_pred eE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 93 SI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 93 ~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+. ....++....|.++++....+++++. ..+.+|+
T Consensus 205 p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~ 241 (933)
T KOG2114|consen 205 PSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYD 241 (933)
T ss_pred cceeeeccCCccceeeecCCCCccEEEecC-ceEEEEc
Confidence 22 45567888899999876664544443 3455554
No 347
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.0049 Score=38.59 Aligned_cols=109 Identities=11% Similarity=0.048 Sum_probs=69.6
Q ss_pred Cceeeee-cCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCC--CC----e--EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 9 GRQLQQH-DFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALK--PD----K--YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 9 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~--~~----~--~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
+..+..+ .+-..-+.++||||++.++.+.. .+.+..+++.. .. . .......+..-.++...+|++.+++.
T Consensus 152 g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~ 231 (307)
T COG3386 152 GGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAV 231 (307)
T ss_pred CCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecc
Confidence 4444444 33556789999999988776644 46777777652 11 1 11223445666788888899886555
Q ss_pred CCC-eEEEeeCCCCceE-EecCCCCCeEEEEEC-CCCCEEEEe
Q psy15612 79 KDN-LLNAWRTPYGASI-FQSKESSSVLSCDIS-ADDKYIVTG 118 (131)
Q Consensus 79 ~~~-~i~~w~~~~~~~~-~~~~~~~~v~~~~~~-~~~~~l~~~ 118 (131)
.++ .+..|+.. |+.+ ...-+...+.+++|- |+.+.|+..
T Consensus 232 ~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iT 273 (307)
T COG3386 232 WGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYIT 273 (307)
T ss_pred cCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEE
Confidence 554 89999988 8777 333333777888885 444555433
No 348
>KOG4649|consensus
Probab=97.63 E-value=0.0044 Score=37.69 Aligned_cols=100 Identities=13% Similarity=0.066 Sum_probs=67.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCe-EEEEE
Q psy15612 30 GEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSV-LSCDI 108 (131)
Q Consensus 30 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v-~~~~~ 108 (131)
..+++.|+..+.+.-.|..++...-...-..++.+-+.- -|.+++.++..+.+++.+..+|+........+.| .....
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~ 101 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQC 101 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEE
Confidence 456677888888888888888753222222233332222 3778899999999999999999766221111222 23445
Q ss_pred CCCCCEEEEecCCCcEEEEEee
Q psy15612 109 SADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 109 ~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.+++..+..++.|+.+...|.+
T Consensus 102 d~~~glIycgshd~~~yalD~~ 123 (354)
T KOG4649|consen 102 DFDGGLIYCGSHDGNFYALDPK 123 (354)
T ss_pred cCCCceEEEecCCCcEEEeccc
Confidence 7789999999999998887763
No 349
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=97.60 E-value=0.0067 Score=39.54 Aligned_cols=118 Identities=7% Similarity=0.006 Sum_probs=58.9
Q ss_pred CEEEeCCCCceeeeecCC---CCeEEEEECCC--CCE-EEEEeCCCcEEEEeC-CCCCe-----EEeec-----------
Q psy15612 1 MYLQSVSPGRQLQQHDFS---SQIFSLGYCPS--GEW-LAVGMENSNVEVLHA-LKPDK-----YQLHL----------- 57 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~---~~v~~~~~~~~--~~~-l~~~~~~~~v~~~~~-~~~~~-----~~~~~----------- 57 (131)
+.+||+++.+.++++... ..+..++|..+ ... ++.+...++|..|-. ..+.- ..+..
T Consensus 224 l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~m 303 (461)
T PF05694_consen 224 LHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEM 303 (461)
T ss_dssp EEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GG
T ss_pred EEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccccccc
Confidence 579999999999988433 24667787554 333 233333444544433 33321 11111
Q ss_pred ------cccceEEEEEccCCCEEEEeCC-CCeEEEeeCCCCceEEec-----C---------------CCCCeEEEEECC
Q psy15612 58 ------HESCVLSLRFAACGKWFVSTGK-DNLLNAWRTPYGASIFQS-----K---------------ESSSVLSCDISA 110 (131)
Q Consensus 58 ------~~~~v~~~~~~~~~~~~~~~~~-~~~i~~w~~~~~~~~~~~-----~---------------~~~~v~~~~~~~ 110 (131)
...-+.++..|.|.++|..++. .|.++-||+.+.....+. + -.+...-+..|.
T Consensus 304 l~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~ 383 (461)
T PF05694_consen 304 LKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSL 383 (461)
T ss_dssp GGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-T
T ss_pred ccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEcc
Confidence 1345789999999999876654 788999999865443111 0 123346777888
Q ss_pred CCCEEEEe
Q psy15612 111 DDKYIVTG 118 (131)
Q Consensus 111 ~~~~l~~~ 118 (131)
||+.++..
T Consensus 384 DGkRlYvT 391 (461)
T PF05694_consen 384 DGKRLYVT 391 (461)
T ss_dssp TSSEEEEE
T ss_pred CCeEEEEE
Confidence 88877654
No 350
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.59 E-value=0.0046 Score=36.83 Aligned_cols=126 Identities=16% Similarity=0.142 Sum_probs=73.5
Q ss_pred CEEEeCCCCceeeee-cCC----CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eeeccccc----------eEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFS----SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLHLHESC----------VLS 64 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~----~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~----------v~~ 64 (131)
|+.+|.++|+.+... ... .....+.....+..++.+..++.+..+|+.+++.. ........ ...
T Consensus 88 l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~ 167 (238)
T PF13360_consen 88 LYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDING 167 (238)
T ss_dssp EEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEE
T ss_pred eEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeeccccc
Confidence 457888899888773 211 11222223334778888888899999999988852 22221111 112
Q ss_pred EEEccCCCEEEEeCCCCe-EEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 65 LRFAACGKWFVSTGKDNL-LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~-i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
-....++ .++.++.++. +.+ |..+++.+.... ....... ....+..++.++.++.+..||+.
T Consensus 168 ~~~~~~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~-~~~~~~~-~~~~~~~l~~~~~~~~l~~~d~~ 230 (238)
T PF13360_consen 168 SPVISDG-RVYVSSGDGRVVAV-DLATGEKLWSKP-ISGIYSL-PSVDGGTLYVTSSDGRLYALDLK 230 (238)
T ss_dssp EEECCTT-EEEEECCTSSEEEE-ETTTTEEEEEEC-SS-ECEC-EECCCTEEEEEETTTEEEEEETT
T ss_pred ceEEECC-EEEEEcCCCeEEEE-ECCCCCEEEEec-CCCccCC-ceeeCCEEEEEeCCCEEEEEECC
Confidence 2222244 6666666665 555 999998764222 2333321 34566777777788999999864
No 351
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.57 E-value=0.0078 Score=38.96 Aligned_cols=120 Identities=12% Similarity=0.091 Sum_probs=67.2
Q ss_pred EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-eec-cccceEEEEEccCCCEEEEeCCC
Q psy15612 3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-LHL-HESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
.+|.++|+.+....... ...+. ..+..++.++.++.+..+|..+++..- ... .......... .+..++.++.+
T Consensus 270 ald~~tG~~~W~~~~~~-~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~ 344 (394)
T PRK11138 270 ALDLRSGQIVWKREYGS-VNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSE 344 (394)
T ss_pred EEECCCCCEEEeecCCC-ccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCC
Confidence 44566666554432211 11111 145567777788999999998876421 110 0111111111 25567788889
Q ss_pred CeEEEeeCCCCceEEec-CCCCCe-EEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 81 NLLNAWRTPYGASIFQS-KESSSV-LSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 81 ~~i~~w~~~~~~~~~~~-~~~~~v-~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+.+...|..+|+.+... .....+ ....+ .+..++.++.||.+..+++
T Consensus 345 G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 345 GYLHWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred CEEEEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence 99999999999988222 222222 22222 2446777788998877653
No 352
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.52 E-value=0.0017 Score=39.49 Aligned_cols=65 Identities=12% Similarity=0.161 Sum_probs=45.5
Q ss_pred EEEccCCCEEEEeCCCCeEEEeeCCC------CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 65 LRFAACGKWFVSTGKDNLLNAWRTPY------GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~i~~w~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.+.+|+.++... |..|.+-..++ +++...+.....-..++||||+.+|+.+...|+|+++|+.
T Consensus 3 ~~~~~~Gk~lAi~q-d~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~ 73 (282)
T PF15492_consen 3 LALSSDGKLLAILQ-DQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLM 73 (282)
T ss_pred eeecCCCcEEEEEe-ccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecc
Confidence 45677888777653 55555554432 2222333445556889999999999999999999999974
No 353
>KOG3621|consensus
Probab=97.52 E-value=0.0005 Score=46.49 Aligned_cols=89 Identities=16% Similarity=0.119 Sum_probs=64.1
Q ss_pred EEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe----E--Ee-eccccceEEEEEccCCC
Q psy15612 2 YLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK----Y--QL-HLHESCVLSLRFAACGK 72 (131)
Q Consensus 2 ~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~----~--~~-~~~~~~v~~~~~~~~~~ 72 (131)
++|+...++..... +..+.+.....+++..+++.|+..+.|.++.+..... . .. ..|+..|.++.|++++.
T Consensus 58 yl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~ 137 (726)
T KOG3621|consen 58 YLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGM 137 (726)
T ss_pred EEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEeccccc
Confidence 55665544443332 2344567777899999999999999999998765331 1 11 23678999999999999
Q ss_pred EEEEeCCCCeEEEeeCCC
Q psy15612 73 WFVSTGKDNLLNAWRTPY 90 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~~ 90 (131)
.+++|...|.+..-.+..
T Consensus 138 k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 138 KLYSGDSQGKVVLTELDS 155 (726)
T ss_pred EEeecCCCceEEEEEech
Confidence 999999999887665544
No 354
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=97.47 E-value=0.013 Score=39.63 Aligned_cols=113 Identities=9% Similarity=0.050 Sum_probs=68.5
Q ss_pred cCCCCeEEEEECCC----CCEEEEEeCCCcEEEEeCCCC-----Ce-EEeec-----cccceEEEEEccCCCEEEEeCCC
Q psy15612 16 DFSSQIFSLGYCPS----GEWLAVGMENSNVEVLHALKP-----DK-YQLHL-----HESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 16 ~~~~~v~~~~~~~~----~~~l~~~~~~~~v~~~~~~~~-----~~-~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
+.-+.|..+.|.|- ...++..-....|.+|.+... +. ..-.. .+--...+.|+|....++.-...
T Consensus 54 GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~ 133 (671)
T PF15390_consen 54 GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTAR 133 (671)
T ss_pred eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecC
Confidence 34466889999884 223444455677999988522 21 11111 11123467899988877655444
Q ss_pred CeEEEeeCCCCc-eE-EecCCCCCeEEEEECCCCCEEEEecCC-CcEEEEE
Q psy15612 81 NLLNAWRTPYGA-SI-FQSKESSSVLSCDISADDKYIVTGSGD-KKATVYE 128 (131)
Q Consensus 81 ~~i~~w~~~~~~-~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~vw~ 128 (131)
..-.+++.+... .+ .-....+.|.|.+|.+||+.++.+-.. =.-.+||
T Consensus 134 dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd 184 (671)
T PF15390_consen 134 DVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWD 184 (671)
T ss_pred ceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence 433455554322 22 555678999999999999988665332 2456676
No 355
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.43 E-value=0.011 Score=37.24 Aligned_cols=124 Identities=15% Similarity=0.131 Sum_probs=75.5
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEE---ECCC----CCEEEEEeC----------CCcEEEEeCCCC-----CeEE--
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLG---YCPS----GEWLAVGME----------NSNVEVLHALKP-----DKYQ-- 54 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~---~~~~----~~~l~~~~~----------~~~v~~~~~~~~-----~~~~-- 54 (131)
|++.|..+.+.+..+ ...+.+.+++ +..+ ..+++.|.. .|.+.++++... ++..
T Consensus 4 i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~ 83 (321)
T PF03178_consen 4 IRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIH 83 (321)
T ss_dssp EEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEE
T ss_pred EEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEE
Confidence 578898888887766 4445555444 4432 456666532 278999999874 2222
Q ss_pred eeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc-eE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 55 LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA-SI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 55 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~-~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
....++.|.+++-- +++ ++.+. ++.+.+|++...+ .. ........+.++... +++++.|...+.+.++..
T Consensus 84 ~~~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~ 156 (321)
T PF03178_consen 84 STEVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRY 156 (321)
T ss_dssp EEEESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred EEeecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEE
Confidence 23456778888765 454 43333 5789999998777 44 222233455555543 568888877677776644
No 356
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.36 E-value=0.011 Score=39.02 Aligned_cols=55 Identities=15% Similarity=0.122 Sum_probs=34.5
Q ss_pred CCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 71 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 71 ~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
|..++..+ ++.+.+||+.+++.+....... |..+.|++++++++..+.+ .+.+++
T Consensus 117 G~LL~~~~-~~~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~~-~i~il~ 171 (443)
T PF04053_consen 117 GNLLGVKS-SDFICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTKD-SIYILK 171 (443)
T ss_dssp SSSEEEEE-TTEEEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred CcEEEEEC-CCCEEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeCC-eEEEEE
Confidence 66565554 3479999999998885544443 8999999999999888765 566654
No 357
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.34 E-value=0.015 Score=36.81 Aligned_cols=125 Identities=12% Similarity=0.102 Sum_probs=72.3
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCCeE---Eeecc-c----cce
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM----------ENSNVEVLHALKPDKY---QLHLH-E----SCV 62 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~~---~~~~~-~----~~v 62 (131)
++++|..+++.+..+.. +-...+..+|+++.++++. ...-|.+||..+-... .++.. . ...
T Consensus 19 v~viD~d~~k~lGmi~~-g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~ 97 (342)
T PF06433_consen 19 VYVIDADSGKLLGMIDT-GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYK 97 (342)
T ss_dssp EEEEETTTTEEEEEEEE-ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--G
T ss_pred EEEEECCCCcEEEEeec-ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccc
Confidence 46778888887665521 2223366799999987642 2335889999887642 22221 1 122
Q ss_pred EEEEEccCCCEEEEe--CCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 63 LSLRFAACGKWFVST--GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 63 ~~~~~~~~~~~~~~~--~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
..++++.||++++.. +-...+.+.|+..++.+.....++...-.-..+ +-+.+.|.||++....
T Consensus 98 ~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~--~~F~~lC~DGsl~~v~ 163 (342)
T PF06433_consen 98 NMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSGN--RGFSMLCGDGSLLTVT 163 (342)
T ss_dssp GGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEET--TEEEEEETTSCEEEEE
T ss_pred cceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEecCC--CceEEEecCCceEEEE
Confidence 347889999987764 455679999999888774443333322221111 2355566666655443
No 358
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.31 E-value=0.0064 Score=32.02 Aligned_cols=100 Identities=15% Similarity=0.166 Sum_probs=62.5
Q ss_pred eEEEEECC---C-CCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEe
Q psy15612 21 IFSLGYCP---S-GEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ 96 (131)
Q Consensus 21 v~~~~~~~---~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~ 96 (131)
|.+|++.+ + ...|+.|+.|..|++|+-..- ...+. ....+..+.-... ..|+.+..+|+|-+|+-. ..+..
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e~-~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~--~RlWR 76 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDEI-VAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRS--QRLWR 76 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCcE-EEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCc--ceeee
Confidence 55666644 3 347899999999999987532 22222 3345666655544 668888899999999763 33322
Q ss_pred cCCCCCeEEEEECC---CCC-EEEEecCCCcEE
Q psy15612 97 SKESSSVLSCDISA---DDK-YIVTGSGDKKAT 125 (131)
Q Consensus 97 ~~~~~~v~~~~~~~---~~~-~l~~~~~d~~i~ 125 (131)
......+.++++.. +|. .|++|-.+|++-
T Consensus 77 iKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 77 IKSKNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 22334455565433 232 578888888764
No 359
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.31 E-value=0.019 Score=37.51 Aligned_cols=46 Identities=24% Similarity=0.363 Sum_probs=33.1
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK 49 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~ 49 (131)
|++|+.. |+.+..+ .. +.+..+.|+.+..++ +...+|.++++|+.+
T Consensus 63 I~iys~s-G~ll~~i~w~~-~~iv~~~wt~~e~Lv-vV~~dG~v~vy~~~G 110 (410)
T PF04841_consen 63 IQIYSSS-GKLLSSIPWDS-GRIVGMGWTDDEELV-VVQSDGTVRVYDLFG 110 (410)
T ss_pred EEEECCC-CCEeEEEEECC-CCEEEEEECCCCeEE-EEEcCCEEEEEeCCC
Confidence 4566644 6666665 34 789999998865554 556899999999853
No 360
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.31 E-value=0.013 Score=35.56 Aligned_cols=114 Identities=15% Similarity=0.163 Sum_probs=69.8
Q ss_pred cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCeEEeecc-ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC--
Q psy15612 16 DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDKYQLHLH-ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG-- 91 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~-- 91 (131)
+....+..++|+|+.. ++++....+.|..++..+..+..+.-. ......+++..++.++++.-+++.+.++++...
T Consensus 19 g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~ 98 (248)
T PF06977_consen 19 GILDELSGLTYNPDTGTLFAVQDEPGEIYELSLDGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTT 98 (248)
T ss_dssp T--S-EEEEEEETTTTEEEEEETTTTEEEEEETT--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----T
T ss_pred CccCCccccEEcCCCCeEEEEECCCCEEEEEcCCCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEecccc
Confidence 4455699999999866 455666777787778754434444322 356789999888888888878899998887321
Q ss_pred ce-----E-Eec----CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 92 AS-----I-FQS----KESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 92 ~~-----~-~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.. . ... ..+...-.++|+|.++.++.+-+..-..++.+
T Consensus 99 ~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~ 146 (248)
T PF06977_consen 99 SLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEV 146 (248)
T ss_dssp T--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred ccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEE
Confidence 11 1 111 24456899999998777777665555666654
No 361
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=97.25 E-value=0.03 Score=38.50 Aligned_cols=105 Identities=10% Similarity=0.037 Sum_probs=68.0
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe--eccccceEEEEEc--cCCCEEEEeCCCCeEEEeeCC-----CCc
Q psy15612 22 FSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL--HLHESCVLSLRFA--ACGKWFVSTGKDNLLNAWRTP-----YGA 92 (131)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~v~~~~~~--~~~~~~~~~~~~~~i~~w~~~-----~~~ 92 (131)
.-+.-+.-++.-++-.....+.|||...+..... ......|.++.|. |+|+.+++.+..+.|.++.-. +..
T Consensus 33 ~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~ 112 (631)
T PF12234_consen 33 SLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKG 112 (631)
T ss_pred ceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCC
Confidence 3344444444444444456799999998875322 2446789999986 689999999999998888532 111
Q ss_pred e----E---EecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 93 S----I---FQSK-ESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 93 ~----~---~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+ + -... .+.+|....|.++|.+++.++ .++.|+|
T Consensus 113 p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~d 154 (631)
T PF12234_consen 113 PSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFD 154 (631)
T ss_pred cccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEEC
Confidence 1 1 1122 347788999999998776543 3566654
No 362
>KOG2114|consensus
Probab=97.21 E-value=0.011 Score=41.41 Aligned_cols=105 Identities=19% Similarity=0.214 Sum_probs=70.6
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCC-CEEEEeCCCC-----eEEEeeCCCC-----
Q psy15612 23 SLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACG-KWFVSTGKDN-----LLNAWRTPYG----- 91 (131)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~-----~i~~w~~~~~----- 91 (131)
.-.+++.+..++.|+.+|.|.+.+-.-.....+..++..+...-+.-++ ..+++.+.|. .+++|++...
T Consensus 28 isc~~s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s 107 (933)
T KOG2114|consen 28 ISCCSSSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS 107 (933)
T ss_pred eeEEcCCCceEEEeeccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC
Confidence 3456888999999999999888776554445566665553333344444 4566655543 4899997632
Q ss_pred -ceE---Eec----C-CCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612 92 -ASI---FQS----K-ESSSVLSCDISADDKYIVTGSGDKKATVY 127 (131)
Q Consensus 92 -~~~---~~~----~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 127 (131)
.+. ... + .+.++.+++.+.+-+.++.|-.+|.|..+
T Consensus 108 P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~ 152 (933)
T KOG2114|consen 108 PQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICY 152 (933)
T ss_pred cceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEE
Confidence 112 111 1 35678899999998899999999988765
No 363
>KOG1008|consensus
Probab=97.21 E-value=7e-05 Score=50.05 Aligned_cols=112 Identities=16% Similarity=0.156 Sum_probs=78.8
Q ss_pred CCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEcc-CCCEEEEeC----CCCeEEEeeC
Q psy15612 19 SQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAA-CGKWFVSTG----KDNLLNAWRT 88 (131)
Q Consensus 19 ~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~-~~~~~~~~~----~~~~i~~w~~ 88 (131)
..+.++++.- +...++.|..+|.|.+-..+...- ....++.....+++|++ |.+.++.|- .|..+.+||+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi 136 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI 136 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence 3456666654 345678888999999988875542 34566778889999998 556666652 2456999998
Q ss_pred CCC--ceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 89 PYG--ASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 89 ~~~--~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.++ .+. +..+......+++|..+.+++.+|...+.++++|+|
T Consensus 137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlR 184 (783)
T KOG1008|consen 137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLR 184 (783)
T ss_pred ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhh
Confidence 866 211 222344555688898888888888888899999886
No 364
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.21 E-value=0.0074 Score=42.34 Aligned_cols=69 Identities=19% Similarity=0.303 Sum_probs=50.0
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR 87 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~ 87 (131)
......+++-+.+| .|++|+.+|.|++||-.+.+. ..+++-..+|..+..+.||++++..+. ..+.+++
T Consensus 576 ~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi~ 645 (794)
T PF08553_consen 576 SKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCK-TYLLLID 645 (794)
T ss_pred cCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEEE
Confidence 33456666666555 778999999999999654333 345666789999999999999987764 4455555
No 365
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=97.19 E-value=0.0028 Score=27.34 Aligned_cols=30 Identities=10% Similarity=0.269 Sum_probs=24.4
Q ss_pred CCeEEEEECCCC---CEEEEecCCCcEEEEEee
Q psy15612 101 SSVLSCDISADD---KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 101 ~~v~~~~~~~~~---~~l~~~~~d~~i~vw~~~ 130 (131)
+.+.++.|+|.. .+|+.+-..+.+.++|++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R 33 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTR 33 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcc
Confidence 468899999854 477777778899999987
No 366
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.06 E-value=0.036 Score=35.79 Aligned_cols=127 Identities=14% Similarity=0.127 Sum_probs=60.2
Q ss_pred EEEeCCC-Cceeeee---cCCCCeEEEEECCCCCEEEEEeC-----CCcEEEEeCCCCCeEEeeccccceEEEEEccCCC
Q psy15612 2 YLQSVSP-GRQLQQH---DFSSQIFSLGYCPSGEWLAVGME-----NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGK 72 (131)
Q Consensus 2 ~iwd~~~-~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 72 (131)
|||-+.+ +.....+ ...+.+..--|.|||..+..-+. +.-|.-+++.+.+...+...+ ....+--++||+
T Consensus 217 RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~p-~~~H~~ss~Dg~ 295 (386)
T PF14583_consen 217 RIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEMP-WCSHFMSSPDGK 295 (386)
T ss_dssp SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE--SEEEEEE-TTSS
T ss_pred EEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeCC-ceeeeEEcCCCC
Confidence 5675542 3333333 22334666778999998765322 234666777777654433222 233455578999
Q ss_pred EEEEeCCCC----------------eEEEeeCCCCceEEecCC----------CC-CeEEEEECCCCCEEEEec-CCCcE
Q psy15612 73 WFVSTGKDN----------------LLNAWRTPYGASIFQSKE----------SS-SVLSCDISADDKYIVTGS-GDKKA 124 (131)
Q Consensus 73 ~~~~~~~~~----------------~i~~w~~~~~~~~~~~~~----------~~-~v~~~~~~~~~~~l~~~~-~d~~i 124 (131)
+++.=+.|. -|++++...+....+..| .. .=....|+||+++++..| ..|..
T Consensus 296 L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~ 375 (386)
T PF14583_consen 296 LFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPP 375 (386)
T ss_dssp EEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-
T ss_pred EEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCc
Confidence 886433321 366788877665422111 11 125688999999876544 46776
Q ss_pred EEEEe
Q psy15612 125 TVYEV 129 (131)
Q Consensus 125 ~vw~~ 129 (131)
.||=+
T Consensus 376 ~vY~v 380 (386)
T PF14583_consen 376 AVYLV 380 (386)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 66643
No 367
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.03 E-value=0.033 Score=35.01 Aligned_cols=110 Identities=13% Similarity=0.003 Sum_probs=64.0
Q ss_pred CCeEEEEECCCCCEEEEEeC-----------CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe-CCCCeEEEe
Q psy15612 19 SQIFSLGYCPSGEWLAVGME-----------NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST-GKDNLLNAW 86 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w 86 (131)
...+.....|+|.+-+.... -+.++.++........+..+-.....++||||++.++.+ +..+.+.-+
T Consensus 111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~ 190 (307)
T COG3386 111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRY 190 (307)
T ss_pred CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEE
Confidence 35677888888887665433 123444554333333344445566789999999887766 445777777
Q ss_pred eCCC--C----ceE--EecCCCCCeEEEEECCCCCEEEEecCCC-cEEEEE
Q psy15612 87 RTPY--G----ASI--FQSKESSSVLSCDISADDKYIVTGSGDK-KATVYE 128 (131)
Q Consensus 87 ~~~~--~----~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~vw~ 128 (131)
++.. + +.. ......+..-.++...+|++-+.+..++ .|..|+
T Consensus 191 ~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~ 241 (307)
T COG3386 191 DLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFN 241 (307)
T ss_pred ecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEEC
Confidence 6642 1 111 2222345555666777777664433333 666665
No 368
>KOG1832|consensus
Probab=96.96 E-value=0.0017 Score=45.78 Aligned_cols=75 Identities=11% Similarity=0.134 Sum_probs=61.1
Q ss_pred eeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCC-C-cEEEEEe
Q psy15612 55 LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGD-K-KATVYEV 129 (131)
Q Consensus 55 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-~-~i~vw~~ 129 (131)
+..+.....|++|+.+.++++.|+..|.+++++..+|... ....|.+.++.+.-+.+|..+.+.+.- . ...+|++
T Consensus 1097 frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~ 1174 (1516)
T KOG1832|consen 1097 FRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDA 1174 (1516)
T ss_pred hhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcc
Confidence 4456778899999999999999999999999999999887 777899999999988898877655432 2 3455654
No 369
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=96.96 E-value=0.048 Score=35.58 Aligned_cols=72 Identities=17% Similarity=0.179 Sum_probs=48.0
Q ss_pred cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEe---cC------CCCCeEEEEECC-----CC---CEEEEecC
Q psy15612 58 HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ---SK------ESSSVLSCDISA-----DD---KYIVTGSG 120 (131)
Q Consensus 58 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~---~~------~~~~v~~~~~~~-----~~---~~l~~~~~ 120 (131)
..+.|..++.| |--+++.+..+|.+.+.|++....++. .. ....+.++.|+. |+ -.+++|..
T Consensus 85 ~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn 163 (395)
T PF08596_consen 85 KQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTN 163 (395)
T ss_dssp -S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEET
T ss_pred cCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeC
Confidence 45778888887 455788888999999999997777632 11 245677888752 33 35677778
Q ss_pred CCcEEEEEee
Q psy15612 121 DKKATVYEVI 130 (131)
Q Consensus 121 d~~i~vw~~~ 130 (131)
.|.+.+|.+.
T Consensus 164 ~G~v~~fkIl 173 (395)
T PF08596_consen 164 SGNVLTFKIL 173 (395)
T ss_dssp TSEEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 8999888763
No 370
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=96.96 E-value=0.028 Score=33.54 Aligned_cols=62 Identities=21% Similarity=0.444 Sum_probs=46.8
Q ss_pred EccCCCEEEEeCCCCeEEEeeCCCCceEEe--------c-------CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 67 FAACGKWFVSTGKDNLLNAWRTPYGASIFQ--------S-------KESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 67 ~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~--------~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+..+++++++.+.+|.+++||+.+++.... . .....|..+.++.+|.-+++-+ +|....|+.
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~ 94 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSP 94 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecc
Confidence 445688899999999999999998877521 1 3557788899998888777655 466777764
No 371
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.95 E-value=0.032 Score=38.35 Aligned_cols=86 Identities=15% Similarity=0.164 Sum_probs=59.4
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEE--CCCCCEEEEEeCCCcEEEEeCCC-------CC---eEE--eeccc-cceE
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGY--CPSGEWLAVGMENSNVEVLHALK-------PD---KYQ--LHLHE-SCVL 63 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~--~~~~~~l~~~~~~~~v~~~~~~~-------~~---~~~--~~~~~-~~v~ 63 (131)
+.|||.+.+.....- ...+.|..+.| .|+++.+++.+..+.|.++.-.. +. +.. +..++ .+|.
T Consensus 53 LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Ig 132 (631)
T PF12234_consen 53 LTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIG 132 (631)
T ss_pred EEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCcc
Confidence 469999988755433 45788999999 57899888888888898875421 11 122 23333 5688
Q ss_pred EEEEccCCCEEEEeCCCCeEEEeeC
Q psy15612 64 SLRFAACGKWFVSTGKDNLLNAWRT 88 (131)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~i~~w~~ 88 (131)
+..|-++|..++.+ ++.+.++|-
T Consensus 133 ds~Wl~~G~LvV~s--GNqlfv~dk 155 (631)
T PF12234_consen 133 DSIWLKDGTLVVGS--GNQLFVFDK 155 (631)
T ss_pred ceeEecCCeEEEEe--CCEEEEECC
Confidence 99999999876655 456777763
No 372
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=96.83 E-value=0.062 Score=34.92 Aligned_cols=95 Identities=13% Similarity=0.054 Sum_probs=54.9
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC--CCCCeEEEE
Q psy15612 30 GEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK--ESSSVLSCD 107 (131)
Q Consensus 30 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~--~~~~v~~~~ 107 (131)
+..++.++.++.+..+|..+++..-..... ....+. ..+..++.++.++.+..+|..+|+.+.... ......+..
T Consensus 256 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~-~~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~ 332 (394)
T PRK11138 256 GGVVYALAYNGNLVALDLRSGQIVWKREYG-SVNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPV 332 (394)
T ss_pred CCEEEEEEcCCeEEEEECCCCCEEEeecCC-CccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCE
Confidence 445666777889999999888752111111 111121 246677778889999999999998762211 111111111
Q ss_pred ECCCCCEEEEecCCCcEEEEEe
Q psy15612 108 ISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 108 ~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
. .+..++.++.+|.+...|.
T Consensus 333 v--~~g~l~v~~~~G~l~~ld~ 352 (394)
T PRK11138 333 L--YNGYLVVGDSEGYLHWINR 352 (394)
T ss_pred E--ECCEEEEEeCCCEEEEEEC
Confidence 1 2445566667777766654
No 373
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.77 E-value=0.052 Score=33.16 Aligned_cols=105 Identities=14% Similarity=0.088 Sum_probs=64.2
Q ss_pred CeEEEEECCCCCEEEEEe---CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEee-CCCCceE-
Q psy15612 20 QIFSLGYCPSGEWLAVGM---ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR-TPYGASI- 94 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~---~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~-~~~~~~~- 94 (131)
.+.+.+++++++.++... ....+.++.......... ....+..-.|++++........+....++. ..+++..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~--~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~ 102 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVL--TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEP 102 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeec--cCCccccccccCCCCEEEEEcCCCceEEEEecCCCccee
Confidence 688999999999887655 233344444433222222 223667788999988777766666656653 3333332
Q ss_pred -Ee-cC-CCCCeEEEEECCCCCEEEEec---CCCcEEE
Q psy15612 95 -FQ-SK-ESSSVLSCDISADDKYIVTGS---GDKKATV 126 (131)
Q Consensus 95 -~~-~~-~~~~v~~~~~~~~~~~l~~~~---~d~~i~v 126 (131)
.. .. ..+.|..+.+||||..++... .++++.+
T Consensus 103 ~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~v 140 (253)
T PF10647_consen 103 VEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYV 140 (253)
T ss_pred EEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEE
Confidence 11 11 122899999999999876544 2355554
No 374
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.73 E-value=0.06 Score=33.47 Aligned_cols=112 Identities=13% Similarity=0.136 Sum_probs=69.7
Q ss_pred CCceeeeecCCCCeEEEEECCCCC-EEEEEeCCCc-EEEEeCCCCCe-EEeeccccc--eEEEEEccCCCEEEEeCC---
Q psy15612 8 PGRQLQQHDFSSQIFSLGYCPSGE-WLAVGMENSN-VEVLHALKPDK-YQLHLHESC--VLSLRFAACGKWFVSTGK--- 79 (131)
Q Consensus 8 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~-v~~~~~~~~~~-~~~~~~~~~--v~~~~~~~~~~~~~~~~~--- 79 (131)
.|+++.......+.-.+.++|.-. -++.+-.-|+ ..++|..+.+. ..+...+.. --.=.|||||.+++..-.
T Consensus 57 aGk~v~~~~lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd 136 (366)
T COG3490 57 AGKIVFATALPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFD 136 (366)
T ss_pred CCceeeeeecccccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCC
Confidence 355555554555556677777533 4555544444 55778876653 222222221 112458999999987643
Q ss_pred --CCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEec
Q psy15612 80 --DNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 80 --~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~ 119 (131)
.+.|-+||.+.+-.. ....++-....+.+.+||+.++.+.
T Consensus 137 ~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 137 PNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred CCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence 356889998744332 4445777788999999999988764
No 375
>KOG2079|consensus
Probab=96.73 E-value=0.02 Score=41.30 Aligned_cols=67 Identities=12% Similarity=0.196 Sum_probs=50.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeecccc---ceEEEEEccCCCEEEEeCCCCe
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHES---CVLSLRFAACGKWFVSTGKDNL 82 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~ 82 (131)
..+++|.+++|+.+|..++.|-.+|.|.+||...++. +.+..+.. .+..+.+..+++.++++...|.
T Consensus 128 ~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 128 RVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred ccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence 3557899999999999999999999999999988765 33443333 3555666666777778777775
No 376
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.63 E-value=0.073 Score=33.12 Aligned_cols=116 Identities=14% Similarity=0.054 Sum_probs=71.0
Q ss_pred EEEeCCCCceeeee-cCCCC--eEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCC--eEEeeccccceEEEEEccCC
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQ--IFSLGYCPSGEWLAVGMEN-----SNVEVLHALKPD--KYQLHLHESCVLSLRFAACG 71 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~--v~~~~~~~~~~~l~~~~~~-----~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~ 71 (131)
.++|..+.+...++ ..+++ --.=.|||||.+|....+| |-|-+||.+.+- ..++..|.-....+.+.+||
T Consensus 94 ~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DG 173 (366)
T COG3490 94 MVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADG 173 (366)
T ss_pred EEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCC
Confidence 35666655555444 22221 1123579999998776443 558899987433 34567777788899999999
Q ss_pred CEEEEeCCC------------------CeEEEeeCCCCceE--Eec---CCCCCeEEEEECCCCCEEEE
Q psy15612 72 KWFVSTGKD------------------NLLNAWRTPYGASI--FQS---KESSSVLSCDISADDKYIVT 117 (131)
Q Consensus 72 ~~~~~~~~~------------------~~i~~w~~~~~~~~--~~~---~~~~~v~~~~~~~~~~~l~~ 117 (131)
+.++.+... ..+.+.|..+|..+ ... .+.-.+..++..++|+..+.
T Consensus 174 rtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfg 242 (366)
T COG3490 174 RTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFG 242 (366)
T ss_pred cEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEE
Confidence 998876431 12444455556554 111 23456778888888775543
No 377
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=96.62 E-value=0.069 Score=32.76 Aligned_cols=62 Identities=19% Similarity=0.209 Sum_probs=43.0
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612 28 PSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA 92 (131)
Q Consensus 28 ~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 92 (131)
..++.|+.|..+| +.+++..... ...+ .....|..+...|+-+.++.-+ |+.+.++++..-.
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i-~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~ 67 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRI-LKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLE 67 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeE-eecceEEEEEEecccCEEEEEc-CCccEEEEchhhc
Confidence 3578899998888 8989983332 2222 2233489999998877766655 5889999876433
No 378
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=96.61 E-value=0.12 Score=36.37 Aligned_cols=73 Identities=16% Similarity=0.184 Sum_probs=52.2
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCC----------CC----eEEe--------eccccceEEEEEccC---CCEE
Q psy15612 20 QIFSLGYCPSGEWLAVGMENSNVEVLHALK----------PD----KYQL--------HLHESCVLSLRFAAC---GKWF 74 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~----------~~----~~~~--------~~~~~~v~~~~~~~~---~~~~ 74 (131)
.|..+.++|+|..++..+..+ |.+..+.. ++ ++.+ ......|..+.|+|. +..+
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 578899999999998887755 55555431 11 1221 123457889999995 5888
Q ss_pred EEeCCCCeEEEeeCCCCce
Q psy15612 75 VSTGKDNLLNAWRTPYGAS 93 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~~ 93 (131)
+.-..|+.+++||+.....
T Consensus 165 ~vLtsdn~lR~y~~~~~~~ 183 (717)
T PF10168_consen 165 VVLTSDNTLRLYDISDPQH 183 (717)
T ss_pred EEEecCCEEEEEecCCCCC
Confidence 8888899999999875443
No 379
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=96.60 E-value=0.14 Score=36.07 Aligned_cols=72 Identities=14% Similarity=0.112 Sum_probs=49.4
Q ss_pred ccceEEEEEccCCCEEEEeCCCCeEEEeeCC---------CCceE--E----------ecCCCCCeEEEEECCC---CCE
Q psy15612 59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTP---------YGASI--F----------QSKESSSVLSCDISAD---DKY 114 (131)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~---------~~~~~--~----------~~~~~~~v~~~~~~~~---~~~ 114 (131)
...|..+..+|+|+.++..+..+...+.=.+ .|+.. . .......|..+.|+|. +..
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 3468889999999999988876643322111 11211 0 1134567899999996 477
Q ss_pred EEEecCCCcEEEEEee
Q psy15612 115 IVTGSGDKKATVYEVI 130 (131)
Q Consensus 115 l~~~~~d~~i~vw~~~ 130 (131)
|+.-..|+.+++||+.
T Consensus 164 l~vLtsdn~lR~y~~~ 179 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDIS 179 (717)
T ss_pred EEEEecCCEEEEEecC
Confidence 8888889999999973
No 380
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.57 E-value=0.086 Score=33.13 Aligned_cols=70 Identities=10% Similarity=0.190 Sum_probs=42.1
Q ss_pred eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy15612 56 HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATV 126 (131)
Q Consensus 56 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 126 (131)
....+.+..+.-++||++++++++.+...-||....... +......++..+.|+|++.+.+.+ ..+.++.
T Consensus 141 ~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~ 211 (302)
T PF14870_consen 141 SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQF 211 (302)
T ss_dssp -S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEE
T ss_pred cCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEE
Confidence 444567888888999999999988877778887544444 555567899999999998876654 5555554
No 381
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.55 E-value=0.017 Score=24.92 Aligned_cols=31 Identities=13% Similarity=0.208 Sum_probs=25.5
Q ss_pred CCeEEEEECCCCC---EEEEEeCCCcEEEEeCCC
Q psy15612 19 SQIFSLGYCPSGE---WLAVGMENSNVEVLHALK 49 (131)
Q Consensus 19 ~~v~~~~~~~~~~---~l~~~~~~~~v~~~~~~~ 49 (131)
+.+.+++|+|++. +|+.+...+.+.++|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 3578999998544 788888889999999985
No 382
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.52 E-value=0.09 Score=32.75 Aligned_cols=114 Identities=12% Similarity=0.136 Sum_probs=74.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeec-cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHL-HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS 93 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 93 (131)
+....+.++.|+|+.+.|++..+.....++=...+. +..++- .-.....+.+..++++.++--+++.+.++.+.....
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~ 162 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTT 162 (316)
T ss_pred cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCcc
Confidence 344569999999999998887776655555444454 344321 123455788888888888888888888887664422
Q ss_pred E-------Eec---CC-CCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 94 I-------FQS---KE-SSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 94 ~-------~~~---~~-~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
. ... .+ +...-.++|+|..+.+..+-+-.-+.++.+
T Consensus 163 ~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~ 209 (316)
T COG3204 163 VISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEV 209 (316)
T ss_pred EEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEE
Confidence 2 011 12 455678999998887777665555666544
No 383
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=96.42 E-value=0.13 Score=33.42 Aligned_cols=112 Identities=9% Similarity=-0.027 Sum_probs=54.8
Q ss_pred eCCCCceeeeec-CCCCeE-----EEEECCCCCEEEEEeC-C--CcEEEEeCCCCCeEEeecccc-ceEEEEEccCCCEE
Q psy15612 5 SVSPGRQLQQHD-FSSQIF-----SLGYCPSGEWLAVGME-N--SNVEVLHALKPDKYQLHLHES-CVLSLRFAACGKWF 74 (131)
Q Consensus 5 d~~~~~~~~~~~-~~~~v~-----~~~~~~~~~~l~~~~~-~--~~v~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 74 (131)
|..||..+..+. .....- .-+|.++|+.|+.++. + ..+.+.|+.+++..++..... ......++|+.+.+
T Consensus 16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~ 95 (386)
T PF14583_consen 16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRAL 95 (386)
T ss_dssp -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEE
T ss_pred CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeE
Confidence 667777776663 222222 2345678877665544 3 457777899999877765432 23356678888887
Q ss_pred EEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEE--CCCCCEEE
Q psy15612 75 VSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDI--SADDKYIV 116 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~--~~~~~~l~ 116 (131)
+-......+.-.|+.+.+.. ........+....| +.+++.++
T Consensus 96 ~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~ 140 (386)
T PF14583_consen 96 YYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLV 140 (386)
T ss_dssp EEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEE
T ss_pred EEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEE
Confidence 65545567888899988775 33334444444444 34556554
No 384
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=96.39 E-value=0.14 Score=33.51 Aligned_cols=90 Identities=11% Similarity=0.145 Sum_probs=54.7
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCC-----------cEEEEeCCCCCe---EEeeccc-cc-eE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENS-----------NVEVLHALKPDK---YQLHLHE-SC-VL 63 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~-----------~v~~~~~~~~~~---~~~~~~~-~~-v~ 63 (131)
|++.|+++++.+... .... ...+.|.++++.++....+. .|..|.+.+... ..+.... .. ..
T Consensus 152 l~v~Dl~tg~~l~d~i~~~~-~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~ 230 (414)
T PF02897_consen 152 LRVFDLETGKFLPDGIENPK-FSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFV 230 (414)
T ss_dssp EEEEETTTTEEEEEEEEEEE-SEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEE
T ss_pred EEEEECCCCcCcCCcccccc-cceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEE
Confidence 578899999776533 2211 22399999988876654332 377788876653 2222322 22 56
Q ss_pred EEEEccCCCEEEEe---CCC-CeEEEeeCCCC
Q psy15612 64 SLRFAACGKWFVST---GKD-NLLNAWRTPYG 91 (131)
Q Consensus 64 ~~~~~~~~~~~~~~---~~~-~~i~~w~~~~~ 91 (131)
.+..++|+++++.. +.+ ..+.+.+...+
T Consensus 231 ~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 231 SVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp EEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred EEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 88899999987643 222 45777788764
No 385
>KOG2377|consensus
Probab=96.32 E-value=0.16 Score=33.80 Aligned_cols=98 Identities=10% Similarity=0.087 Sum_probs=64.3
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-----EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-----YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG 91 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 91 (131)
..++|.++.|++|.+.++.--.+.+|.+++....+. .+.......|..+.|+.+ +-++... +..+.+|.....
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~-~~G~e~y~v~pe 142 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFIT-DQGIEFYQVLPE 142 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEe-cCCeEEEEEchh
Confidence 456899999999999999998999999998854332 222334456889999865 3344333 223455554332
Q ss_pred ce--EEecCCCCCeEEEEECCCCCEEE
Q psy15612 92 AS--IFQSKESSSVLSCDISADDKYIV 116 (131)
Q Consensus 92 ~~--~~~~~~~~~v~~~~~~~~~~~l~ 116 (131)
+. ...+.+...|.-..|.++.+.+.
T Consensus 143 krslRlVks~~~nvnWy~yc~et~v~L 169 (657)
T KOG2377|consen 143 KRSLRLVKSHNLNVNWYMYCPETAVIL 169 (657)
T ss_pred hhhhhhhhhcccCccEEEEccccceEe
Confidence 22 24455677777777888776543
No 386
>PRK10115 protease 2; Provisional
Probab=96.26 E-value=0.24 Score=34.90 Aligned_cols=105 Identities=11% Similarity=0.065 Sum_probs=61.3
Q ss_pred eEEEEECCCCCEEEEEeC-----CCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEEeCC------CCeEEEee
Q psy15612 21 IFSLGYCPSGEWLAVGME-----NSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVSTGK------DNLLNAWR 87 (131)
Q Consensus 21 v~~~~~~~~~~~l~~~~~-----~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~------~~~i~~w~ 87 (131)
+..+.++|++++|+.+.. ...+.+.|+.++.. ..+.... ..+.|.+|++.|+.... ...++.++
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~---~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~ 205 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE---PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT 205 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc---eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence 677889999998876532 33588888887762 2222211 46999999987665432 23577778
Q ss_pred CCCCc--eE-EecCCCCCeE-EEEECCCCCEEEEecC---CCcEEEEE
Q psy15612 88 TPYGA--SI-FQSKESSSVL-SCDISADDKYIVTGSG---DKKATVYE 128 (131)
Q Consensus 88 ~~~~~--~~-~~~~~~~~v~-~~~~~~~~~~l~~~~~---d~~i~vw~ 128 (131)
+.++. -. .......... ....+.++++++..+. ++.+.+++
T Consensus 206 lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~ 253 (686)
T PRK10115 206 IGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLD 253 (686)
T ss_pred CCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEE
Confidence 88773 22 2222222222 3334447776654332 34566665
No 387
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.19 E-value=0.072 Score=28.19 Aligned_cols=64 Identities=14% Similarity=0.132 Sum_probs=43.2
Q ss_pred eEEEEEcc---CC-CEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 62 VLSLRFAA---CG-KWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 62 v~~~~~~~---~~-~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
|.++++.. || +-|+.++.|..|++|+-. +.+....-.+.+.+++-...+ .++-+-.+|+|-+|+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~~~v~~L~~~~~~-~F~Y~l~NGTVGvY~ 69 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITETDKVTSLCSLGGG-RFAYALANGTVGVYD 69 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecccceEEEEEcCCC-EEEEEecCCEEEEEe
Confidence 34555443 44 468899999999999843 444555566778888776664 466666777777765
No 388
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=96.09 E-value=0.14 Score=30.64 Aligned_cols=75 Identities=16% Similarity=0.128 Sum_probs=52.6
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE--E------ee-------ccccceEEEEEccCCCEEEEeCCCC
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY--Q------LH-------LHESCVLSLRFAACGKWFVSTGKDN 81 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~--~------~~-------~~~~~v~~~~~~~~~~~~~~~~~~~ 81 (131)
...++..+. ..+.++++...+|.+++||+.+.+.. . +. .....|..+.++.+|.-+++-+ ++
T Consensus 11 Lgs~~~~l~--~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng 87 (219)
T PF07569_consen 11 LGSPVSFLE--CNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NG 87 (219)
T ss_pred cCCceEEEE--eCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CC
Confidence 344455554 46788888899999999999887631 1 11 2445678888898898877665 46
Q ss_pred eEEEeeCCCCceE
Q psy15612 82 LLNAWRTPYGASI 94 (131)
Q Consensus 82 ~i~~w~~~~~~~~ 94 (131)
..+.|+..-+..+
T Consensus 88 ~~y~y~~~L~~W~ 100 (219)
T PF07569_consen 88 DSYSYSPDLGCWI 100 (219)
T ss_pred CEEEeccccceeE
Confidence 7788887655554
No 389
>KOG4499|consensus
Probab=95.99 E-value=0.17 Score=30.73 Aligned_cols=91 Identities=12% Similarity=0.117 Sum_probs=59.7
Q ss_pred CeEEEEECCCCCEEE-EEeCCCcEEEEe--CCCCCe------EEeec----cccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612 20 QIFSLGYCPSGEWLA-VGMENSNVEVLH--ALKPDK------YQLHL----HESCVLSLRFAACGKWFVSTGKDNLLNAW 86 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~-~~~~~~~v~~~~--~~~~~~------~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~i~~w 86 (131)
--+.++|+.+.+.+. +-+.+.+|.-|| ..++.. ..+.. .+...-.++..-+|+..++.-..+++...
T Consensus 159 IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~ 238 (310)
T KOG4499|consen 159 ISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKV 238 (310)
T ss_pred CCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEE
Confidence 346788887766554 455667776677 555442 11111 11223345556678887777778899999
Q ss_pred eCCCCceE-EecCCCCCeEEEEECC
Q psy15612 87 RTPYGASI-FQSKESSSVLSCDISA 110 (131)
Q Consensus 87 ~~~~~~~~-~~~~~~~~v~~~~~~~ 110 (131)
|..+|+.+ ..+-....+++++|-.
T Consensus 239 dp~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 239 DPTTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred CCCCCcEEEEEEcCCCceEEEEecC
Confidence 99999998 4444678899999963
No 390
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=95.93 E-value=0.21 Score=31.44 Aligned_cols=104 Identities=11% Similarity=0.112 Sum_probs=56.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-eeccccceEEEEEccCCCEEEEeCCCCeEEEeeC-CCCce
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRT-PYGAS 93 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~-~~~~~ 93 (131)
+..+.+..+.-+++|++++++.......-|+.....-.. -......+..+.|+|++...+.+ +.+.++.=+. ...+.
T Consensus 142 ~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~ 220 (302)
T PF14870_consen 142 ETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGET 220 (302)
T ss_dssp S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEE
T ss_pred CCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccc
Confidence 344668888889999988887665555667765433222 23346789999999998876655 7787777662 22222
Q ss_pred E-E----ecCCCCCeEEEEECCCCCEEEEecC
Q psy15612 94 I-F----QSKESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 94 ~-~----~~~~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
- . .......+..++|.+++...++++.
T Consensus 221 w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~ 252 (302)
T PF14870_consen 221 WSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS 252 (302)
T ss_dssp E---B-TTSS--S-EEEEEESSSS-EEEEEST
T ss_pred cccccCCcccCceeeEEEEecCCCCEEEEeCC
Confidence 1 1 1123445889999998877776654
No 391
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=95.90 E-value=0.37 Score=33.98 Aligned_cols=109 Identities=8% Similarity=0.037 Sum_probs=71.8
Q ss_pred eEEEEECC--CCCEEEEEeCCCcEEEEeCCC-------C---------C----eEEeeccccceEEEEEc--cCCCEEEE
Q psy15612 21 IFSLGYCP--SGEWLAVGMENSNVEVLHALK-------P---------D----KYQLHLHESCVLSLRFA--ACGKWFVS 76 (131)
Q Consensus 21 v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~-------~---------~----~~~~~~~~~~v~~~~~~--~~~~~~~~ 76 (131)
|+.+.... +...|+.+..||.|.+|..+. . . .............++++ ...++||+
T Consensus 103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAV 182 (717)
T PF08728_consen 103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAV 182 (717)
T ss_pred eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEE
Confidence 44454432 345678889999999996521 0 0 01112234567788888 77888888
Q ss_pred eCCCCeEEEeeCCCC--ceE--EecCCCCCeEEEEECCCC-----C-EEEEecCCCcEEEEEe
Q psy15612 77 TGKDNLLNAWRTPYG--ASI--FQSKESSSVLSCDISADD-----K-YIVTGSGDKKATVYEV 129 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~--~~~--~~~~~~~~v~~~~~~~~~-----~-~l~~~~~d~~i~vw~~ 129 (131)
++....|.+|-.... +.. ....+...|.+++|-++. . ++++++-.|.+.+|++
T Consensus 183 SsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 183 SSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 888888888755432 222 223467888999997643 2 6778888999998887
No 392
>KOG3630|consensus
Probab=95.86 E-value=0.058 Score=39.44 Aligned_cols=109 Identities=13% Similarity=-0.066 Sum_probs=70.5
Q ss_pred CeEEEEECCCCCEEEE--EeCCCcEEEEeCCCCCe------E------EeeccccceEEEEEccCCC-EEEEeCCCCeEE
Q psy15612 20 QIFSLGYCPSGEWLAV--GMENSNVEVLHALKPDK------Y------QLHLHESCVLSLRFAACGK-WFVSTGKDNLLN 84 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~--~~~~~~v~~~~~~~~~~------~------~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~ 84 (131)
.+..+...+|+...++ ..++..|..||++.-.. . ..........++.|+|.-. ..+....|+.|.
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 4556666777665544 33444688899875331 0 1112234566888988533 356667788888
Q ss_pred EeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 85 AWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 85 ~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+..+...... .........++++|+|.|+.++.|-..|++.-|.
T Consensus 182 V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~ 226 (1405)
T KOG3630|consen 182 VKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYE 226 (1405)
T ss_pred hhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEee
Confidence 7765433222 2235567789999999999999999888877654
No 393
>KOG4441|consensus
Probab=95.84 E-value=0.36 Score=33.32 Aligned_cols=120 Identities=13% Similarity=0.043 Sum_probs=61.5
Q ss_pred EEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCC------CcEEEEeCCCCCeEEeeccccceEEEEEc-cCCC
Q psy15612 2 YLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMEN------SNVEVLHALKPDKYQLHLHESCVLSLRFA-ACGK 72 (131)
Q Consensus 2 ~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~ 72 (131)
..||..+++..... .....-.+++.. ++...++|+.+ ..+..||..+.+-..+..-...-...... -+|.
T Consensus 304 e~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~g~ 382 (571)
T KOG4441|consen 304 ECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVLDGK 382 (571)
T ss_pred EEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEECCE
Confidence 45666655433322 222222223322 45677788887 34778888777643322211111111111 2577
Q ss_pred EEEEeCCCCe-----EEEeeCCCCceEEecCCCCCeEEEEE-CCCCCEEEEecCCC
Q psy15612 73 WFVSTGKDNL-----LNAWRTPYGASIFQSKESSSVLSCDI-SADDKYIVTGSGDK 122 (131)
Q Consensus 73 ~~~~~~~~~~-----i~~w~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~ 122 (131)
..+.|+.|+. +-.||..+.+..............+. .-+|+..+.|+.++
T Consensus 383 iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~ 438 (571)
T KOG4441|consen 383 LYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDG 438 (571)
T ss_pred EEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCC
Confidence 7788888864 77788877766533332222222222 22566667777554
No 394
>KOG1897|consensus
Probab=95.84 E-value=0.47 Score=34.57 Aligned_cols=125 Identities=14% Similarity=0.187 Sum_probs=76.1
Q ss_pred CEEEeCCCCceeeeec--CCC---CeEEEEECCC-CCEEEEEeC----------CCcEEEEeCCC-CCeEEee--ccccc
Q psy15612 1 MYLQSVSPGRQLQQHD--FSS---QIFSLGYCPS-GEWLAVGME----------NSNVEVLHALK-PDKYQLH--LHESC 61 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~--~~~---~v~~~~~~~~-~~~l~~~~~----------~~~v~~~~~~~-~~~~~~~--~~~~~ 61 (131)
++++|-.|.+.+...+ ..+ .+.+..|..| +.+++.|.. .|.+.+|.... +++..+. .-++.
T Consensus 752 l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Ga 831 (1096)
T KOG1897|consen 752 LRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGA 831 (1096)
T ss_pred EEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccc
Confidence 4677877777766552 223 3555568777 556666532 46677777765 3333322 23455
Q ss_pred eEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 62 VLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 62 v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+..+..- +|++++. -+..+++|++.+++.+ ....+...+..+...-.|..++.|.--+.+.+..
T Consensus 832 v~aL~~f-ngkllA~--In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~ 896 (1096)
T KOG1897|consen 832 VYALVEF-NGKLLAG--INQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQ 896 (1096)
T ss_pred eeehhhh-CCeEEEe--cCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEE
Confidence 5555432 4665543 4557999999888666 4445566666777777778888877666665543
No 395
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=95.81 E-value=0.34 Score=32.86 Aligned_cols=122 Identities=11% Similarity=0.154 Sum_probs=70.1
Q ss_pred eCCCCceeeeecCCCCeEEEEECCCCC-------EEEEEeCCCcEEEEeCC--CCCeEEeeccccceEEEEE----ccCC
Q psy15612 5 SVSPGRQLQQHDFSSQIFSLGYCPSGE-------WLAVGMENSNVEVLHAL--KPDKYQLHLHESCVLSLRF----AACG 71 (131)
Q Consensus 5 d~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~~~~v~~~~~~--~~~~~~~~~~~~~v~~~~~----~~~~ 71 (131)
|++-|+.+........+ -+.+.|..+ .-+.|-.+..|.-.|.+ +.++. ....+.....=.| .-..
T Consensus 496 DIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~-v~esKdY~tKn~Fss~~tTes 573 (776)
T COG5167 496 DIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIK-VVESKDYKTKNKFSSGMTTES 573 (776)
T ss_pred ecccceeeeEeecCCcc-eeecCCchhHHhcCccceEEeecccceEEecccccCCcee-eeeehhccccccccccccccC
Confidence 45556666555444444 566666422 12334445556555654 22221 1111111111122 2234
Q ss_pred CEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 72 KWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 72 ~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
-+++.+++.|.|++||--.-+.. .+.+.+..|..+..+.+|++++..+.. .+.+-|+
T Consensus 574 GyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~ 631 (776)
T COG5167 574 GYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDV 631 (776)
T ss_pred ceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEec
Confidence 57899999999999995433222 556678899999999999998877764 4555554
No 396
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=95.66 E-value=0.12 Score=26.32 Aligned_cols=40 Identities=3% Similarity=-0.099 Sum_probs=28.8
Q ss_pred CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 38 ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 38 ~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
.+|.+..||..+++...+...-.....+++++|+..++.+
T Consensus 35 ~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 35 PTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVA 74 (89)
T ss_dssp --EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEE
T ss_pred CCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEE
Confidence 3577889999998876555445567899999999977655
No 397
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=95.64 E-value=0.058 Score=22.72 Aligned_cols=40 Identities=13% Similarity=0.047 Sum_probs=25.2
Q ss_pred cCCCEEEEeC-CCCeEEEeeCCCCceEEecCCCCCeEEEEE
Q psy15612 69 ACGKWFVSTG-KDNLLNAWRTPYGASIFQSKESSSVLSCDI 108 (131)
Q Consensus 69 ~~~~~~~~~~-~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~ 108 (131)
|+++.++.+. .++.+.++|..+++.+.....+.....+.|
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence 5677666554 477899999988877633333444444444
No 398
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=95.59 E-value=0.38 Score=31.78 Aligned_cols=79 Identities=14% Similarity=0.136 Sum_probs=50.0
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eeeccccc-eEEEEEccC-----------------CCE-EE
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLHLHESC-VLSLRFAAC-----------------GKW-FV 75 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~-v~~~~~~~~-----------------~~~-~~ 75 (131)
+....+.++..+|++++.++.+.-|.|.++|+.+.... ..++.... +.-+..... ..+ ++
T Consensus 305 D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvI 384 (415)
T PF14655_consen 305 DSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVI 384 (415)
T ss_pred cCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEE
Confidence 34456889999999999999999999999999887642 22322211 111111100 111 23
Q ss_pred EeCCCCeEEEeeCCCCceE
Q psy15612 76 STGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~ 94 (131)
-+-+.+.+.+|++++|..+
T Consensus 385 yaprRg~lEvW~~~~g~Rv 403 (415)
T PF14655_consen 385 YAPRRGILEVWSMRQGPRV 403 (415)
T ss_pred EeccCCeEEEEecCCCCEE
Confidence 3566788889998877766
No 399
>KOG2247|consensus
Probab=95.55 E-value=0.0013 Score=43.21 Aligned_cols=102 Identities=12% Similarity=0.096 Sum_probs=70.3
Q ss_pred cCCCCeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612 16 DFSSQIFSLGYCPSGEWLA-VGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS 93 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 93 (131)
..++....++|..++..++ .+...+.+.+||+.+..-.++. +....-.-+.|++.+..++.+...+.+.+++..+.+.
T Consensus 72 n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~ 151 (615)
T KOG2247|consen 72 NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRR 151 (615)
T ss_pred CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccCcchHHHHhhccCCccccccccccceEEEeccchhh
Confidence 4455567788877766554 4566788999999765532221 1111112277888888888888889999999988777
Q ss_pred EEe-cCCCCCeEEEEECCCCCEEEE
Q psy15612 94 IFQ-SKESSSVLSCDISADDKYIVT 117 (131)
Q Consensus 94 ~~~-~~~~~~v~~~~~~~~~~~l~~ 117 (131)
... ..|..++.++++.+.+..+..
T Consensus 152 iiv~Gkh~RRgtq~av~lEd~vil~ 176 (615)
T KOG2247|consen 152 IIVMGKHQRRGTQIAVTLEDYVILC 176 (615)
T ss_pred hhhhcccccceeEEEecccceeeec
Confidence 744 448888999999887665443
No 400
>PHA02713 hypothetical protein; Provisional
Probab=95.37 E-value=0.47 Score=32.64 Aligned_cols=85 Identities=8% Similarity=-0.032 Sum_probs=43.4
Q ss_pred cEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCC------CeEEEeeCCC-CceEEecC---CCCCeEEEE
Q psy15612 41 NVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKD------NLLNAWRTPY-GASIFQSK---ESSSVLSCD 107 (131)
Q Consensus 41 ~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~------~~i~~w~~~~-~~~~~~~~---~~~~v~~~~ 107 (131)
.+..||..+.+-..+.. .......+ .-+++..+.|+.+ ..+..||..+ .+...... .......+.
T Consensus 433 ~ve~YDP~td~W~~v~~m~~~r~~~~~~--~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~ 510 (557)
T PHA02713 433 KVIRYDTVNNIWETLPNFWTGTIRPGVV--SHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTIL 510 (557)
T ss_pred eEEEECCCCCeEeecCCCCcccccCcEE--EECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEE
Confidence 46778887765433221 11111122 2246666666653 2367899887 56652222 222222222
Q ss_pred ECCCCCEEEEecCCC--cEEEEEe
Q psy15612 108 ISADDKYIVTGSGDK--KATVYEV 129 (131)
Q Consensus 108 ~~~~~~~l~~~~~d~--~i~vw~~ 129 (131)
+ +++..++|+.++ .+-.||+
T Consensus 511 ~--~~~iyv~Gg~~~~~~~e~yd~ 532 (557)
T PHA02713 511 H--DNTIMMLHCYESYMLQDTFNV 532 (557)
T ss_pred E--CCEEEEEeeecceeehhhcCc
Confidence 2 677778888776 4444443
No 401
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=95.26 E-value=0.37 Score=29.61 Aligned_cols=124 Identities=11% Similarity=-0.017 Sum_probs=66.3
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE---------------eeccccceEEEE
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ---------------LHLHESCVLSLR 66 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~---------------~~~~~~~v~~~~ 66 (131)
++++...............|..+...|+-+.+++-+ |+.+.++++..-.... .......+..++
T Consensus 19 ~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~ 97 (275)
T PF00780_consen 19 YVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFA 97 (275)
T ss_pred EEEEecCCccceeEeecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccccccccccccCCeeEEe
Confidence 455553222222332333489999988877766654 4899999986543211 111122333333
Q ss_pred --EccCCCEEEEeCCCCeEEEeeCCCC-----ceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 67 --FAACGKWFVSTGKDNLLNAWRTPYG-----ASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 67 --~~~~~~~~~~~~~~~~i~~w~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
-...+...+.....+.+.+|.+... +.......+..+..++|. ++.++.+..++ ..+.|+
T Consensus 98 ~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~v~~~~~-f~~idl 164 (275)
T PF00780_consen 98 VNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKICVGTSKG-FYLIDL 164 (275)
T ss_pred eccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEEEEeCCc-eEEEec
Confidence 1123333344444558888876542 222444456888889987 45565554433 444443
No 402
>KOG1916|consensus
Probab=95.20 E-value=0.016 Score=41.19 Aligned_cols=66 Identities=11% Similarity=0.160 Sum_probs=43.0
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEE-----------EEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612 24 LGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLS-----------LRFAACGKWFVSTGKDNLLNAWRTP 89 (131)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~-----------~~~~~~~~~~~~~~~~~~i~~w~~~ 89 (131)
.-|-++...+.++..++++++..........+..|...+.+ -..||||..++.++.||.+.+|.+.
T Consensus 189 cp~~~~~~~ic~~~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 189 CPIAVNKVYICYGLKGGEIRLLNINRALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred cccccccceeeeccCCCceeEeeechHHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence 33344566777788888888877654443222224333332 2368999999999999998888754
No 403
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=95.20 E-value=0.43 Score=30.06 Aligned_cols=108 Identities=14% Similarity=0.107 Sum_probs=67.0
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA 92 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 92 (131)
....-+..++++ +++...+..+.-++++|+.+....+..+ -.+-.+++.. .|++...+..+..+.+.|+.+.+
T Consensus 84 ~~~~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdps 159 (370)
T COG5276 84 NARDLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPS 159 (370)
T ss_pred ehhhhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCC
Confidence 334445556664 4566666667779999998776433222 1234445544 59999998877778889988765
Q ss_pred eEEe----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 93 SIFQ----SKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 93 ~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
...+ .........++.| |++...+..|+-+++-|+
T Consensus 160 sP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDV 198 (370)
T COG5276 160 SPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDV 198 (370)
T ss_pred CceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEc
Confidence 5422 2234444566665 555566666777777665
No 404
>PHA02713 hypothetical protein; Provisional
Probab=95.13 E-value=0.68 Score=31.91 Aligned_cols=64 Identities=14% Similarity=-0.008 Sum_probs=36.6
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCC--------------------
Q psy15612 29 SGEWLAVGMENS-----NVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKD-------------------- 80 (131)
Q Consensus 29 ~~~~l~~~~~~~-----~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~-------------------- 80 (131)
+++..+.|+.++ .+..||..+..-..+.. .......+. -+|+..+.|+.+
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~ 428 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDT 428 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccc
Confidence 566677777643 47789988765433222 111111222 256666666654
Q ss_pred ---CeEEEeeCCCCceE
Q psy15612 81 ---NLLNAWRTPYGASI 94 (131)
Q Consensus 81 ---~~i~~w~~~~~~~~ 94 (131)
+.+..||..+.+..
T Consensus 429 ~~~~~ve~YDP~td~W~ 445 (557)
T PHA02713 429 HSSNKVIRYDTVNNIWE 445 (557)
T ss_pred cccceEEEECCCCCeEe
Confidence 24677888877665
No 405
>KOG2280|consensus
Probab=95.12 E-value=0.78 Score=32.54 Aligned_cols=48 Identities=17% Similarity=0.303 Sum_probs=33.3
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD 51 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~ 51 (131)
|+||+.. |+.+..+ .|. .+..+.|+.+..+| +...+|.+.+|++....
T Consensus 66 I~If~~s-G~lL~~~~w~~~-~lI~mgWs~~eeLI-~v~k~g~v~Vy~~~ge~ 115 (829)
T KOG2280|consen 66 IRIFNIS-GQLLGRILWKHG-ELIGMGWSDDEELI-CVQKDGTVHVYGLLGEF 115 (829)
T ss_pred EEEEecc-ccchHHHHhcCC-CeeeecccCCceEE-EEeccceEEEeecchhh
Confidence 3566644 6666554 343 78889999776554 55689999999986544
No 406
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=95.11 E-value=0.092 Score=21.83 Aligned_cols=31 Identities=13% Similarity=0.106 Sum_probs=19.0
Q ss_pred eccccceEEEEEccCCCEEEEeCC-C--CeEEEe
Q psy15612 56 HLHESCVLSLRFAACGKWFVSTGK-D--NLLNAW 86 (131)
Q Consensus 56 ~~~~~~v~~~~~~~~~~~~~~~~~-~--~~i~~w 86 (131)
......-....|+|||+.|+.++. + +...||
T Consensus 5 t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 5 TNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp S-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred ccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 344556678899999998876543 3 444444
No 407
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=95.09 E-value=0.29 Score=33.39 Aligned_cols=67 Identities=16% Similarity=0.253 Sum_probs=41.5
Q ss_pred CCCCEEEEEeCCCcEEEEeCCC----CC-eEE--ee--------------------ccccceEEEEEcc----CCCEEEE
Q psy15612 28 PSGEWLAVGMENSNVEVLHALK----PD-KYQ--LH--------------------LHESCVLSLRFAA----CGKWFVS 76 (131)
Q Consensus 28 ~~~~~l~~~~~~~~v~~~~~~~----~~-~~~--~~--------------------~~~~~v~~~~~~~----~~~~~~~ 76 (131)
+++..++.+..||.+....... +. ... +. ..........++. +..++++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 4667778888888888777653 11 111 00 0123345566665 6778889
Q ss_pred eCCCCeEEEeeCCCCceE
Q psy15612 77 TGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~ 94 (131)
.+.|+.+++||+.+++++
T Consensus 236 l~~D~~LRiW~l~t~~~~ 253 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCL 253 (547)
T ss_dssp EETTSEEEEEETTTTCEE
T ss_pred EeCCCeEEEEECCCCeEE
Confidence 999999999999999984
No 408
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=94.96 E-value=0.55 Score=30.02 Aligned_cols=100 Identities=15% Similarity=0.138 Sum_probs=54.6
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE---e----eccccceEEEEEccC---CCEEE-EeCCC--------
Q psy15612 20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ---L----HLHESCVLSLRFAAC---GKWFV-STGKD-------- 80 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~---~----~~~~~~v~~~~~~~~---~~~~~-~~~~~-------- 80 (131)
...+|+|.|+|+++++ ...|.|.+++........ + .........++++|+ ..+++ ..+..
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~ 81 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND 81 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence 4678999999877665 569999999933322111 1 123456789999994 23333 33311
Q ss_pred CeEEEeeCCCC-------ceEE-e-c---CCCCCeEEEEECCCCCEEEEecC
Q psy15612 81 NLLNAWRTPYG-------ASIF-Q-S---KESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 81 ~~i~~w~~~~~-------~~~~-~-~---~~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
..|.-|....+ +.+. . . .....-..+.|.|+|.+.++.+.
T Consensus 82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~ 133 (331)
T PF07995_consen 82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGD 133 (331)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-
T ss_pred eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCC
Confidence 23444444333 1111 1 1 23455677999999976666543
No 409
>KOG1916|consensus
Probab=94.86 E-value=0.034 Score=39.71 Aligned_cols=113 Identities=10% Similarity=0.009 Sum_probs=65.5
Q ss_pred cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCC--CCCe-E-----EeeccccceEEEEEcc---CCCEEEEeCCCCeE
Q psy15612 16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHAL--KPDK-Y-----QLHLHESCVLSLRFAA---CGKWFVSTGKDNLL 83 (131)
Q Consensus 16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~--~~~~-~-----~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~i 83 (131)
+..+.+..+.|.. +...+. ..-|.+.+|++. .+++ . ........+.-+.|.| +..++..+-.++.+
T Consensus 130 gf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i 207 (1283)
T KOG1916|consen 130 GFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEI 207 (1283)
T ss_pred cCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCce
Confidence 4566677777733 111221 233567778764 3332 1 1222333445555554 55667777777888
Q ss_pred EEeeCCCCceEEecCCCCCeEEE-----------EECCCCCEEEEecCCCcEEEEEee
Q psy15612 84 NAWRTPYGASIFQSKESSSVLSC-----------DISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 84 ~~w~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.++..........|...+..+ ..+|||+.++..+.||.++.|.+.
T Consensus 208 ~lL~~~ra~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 208 RLLNINRALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred eEeeechHHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence 87766543332222244443322 269999999999999999999763
No 410
>KOG3630|consensus
Probab=94.85 E-value=0.16 Score=37.39 Aligned_cols=101 Identities=11% Similarity=0.042 Sum_probs=64.7
Q ss_pred CCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEE
Q psy15612 18 SSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIF 95 (131)
Q Consensus 18 ~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~ 95 (131)
.....++.|+|.-. ..+....|+.|++..+..... ..-........+++|+|.|+.++.+-..|++.-|...-.....
T Consensus 155 ~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ 234 (1405)
T KOG3630|consen 155 PVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSE 234 (1405)
T ss_pred ccccccccccCCccchhhhhccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccceeec
Confidence 34467788888533 345556677777766543221 1112234567899999999999999999988777654221111
Q ss_pred e----cCCCCCeEEEEECCCCCEEEEe
Q psy15612 96 Q----SKESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 96 ~----~~~~~~v~~~~~~~~~~~l~~~ 118 (131)
. .....+|.+++|-....++++-
T Consensus 235 ip~Pp~~e~yrvl~v~Wl~t~eflvvy 261 (1405)
T KOG3630|consen 235 IPEPPVEENYRVLSVTWLSTQEFLVVY 261 (1405)
T ss_pred ccCCCcCCCcceeEEEEecceeEEEEe
Confidence 1 1125889999998777766653
No 411
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=94.85 E-value=0.56 Score=29.58 Aligned_cols=114 Identities=14% Similarity=0.134 Sum_probs=70.7
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe----eccccceEEEEEccCCCE
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL----HLHESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~ 73 (131)
++|.|+.+.+.-... ...+--..+. -.|++...+..+.-+.+.|+.......+ .........+..| |++
T Consensus 108 L~IvDIS~P~sP~~~~~lnt~gyaygv~--vsGn~aYVadlddgfLivdvsdpssP~lagrya~~~~d~~~v~IS--Gn~ 183 (370)
T COG5276 108 LRIVDISTPDSPTLIGFLNTDGYAYGVY--VSGNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPGGDTHDVAIS--GNY 183 (370)
T ss_pred eEEEeccCCCCcceeccccCCceEEEEE--ecCCEEEEeeccCcEEEEECCCCCCceeeeeeccCCCCceeEEEe--cCe
Confidence 467777655443333 2223333443 3578877777566677889876653222 2233334566665 788
Q ss_pred EEEeCCCCeEEEeeCCCCceEEecC---CCCCeEEEEECCCCCEEEEe
Q psy15612 74 FVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~ 118 (131)
...+.+|+.+.+.|+.+.....+.+ .+..+.++..+++..+++..
T Consensus 184 AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy 231 (370)
T COG5276 184 AYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVY 231 (370)
T ss_pred EEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEc
Confidence 8888899999999998776653332 33477888888776655543
No 412
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=94.84 E-value=0.77 Score=31.06 Aligned_cols=25 Identities=16% Similarity=0.383 Sum_probs=22.2
Q ss_pred CCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 70 CGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 70 ~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
.+..++.++.++.++.+|..+|+.+
T Consensus 405 ~g~~v~~g~~dG~l~ald~~tG~~l 429 (488)
T cd00216 405 AGNLVFAGAADGYFRAFDATTGKEL 429 (488)
T ss_pred cCCeEEEECCCCeEEEEECCCCcee
Confidence 4677888889999999999999998
No 413
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=94.80 E-value=0.53 Score=29.08 Aligned_cols=115 Identities=9% Similarity=0.123 Sum_probs=72.1
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEe--ecc---ccceEEEEEccCCCEEE
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQL--HLH---ESCVLSLRFAACGKWFV 75 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~--~~~---~~~v~~~~~~~~~~~~~ 75 (131)
.+||.++-+.+..+...+.-..++ .+++.|+.......+..+|..+.+. ..+ ... -..+..+.+. +|...+
T Consensus 113 f~yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyA 189 (264)
T PF05096_consen 113 FVYDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYA 189 (264)
T ss_dssp EEEETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEE
T ss_pred EEEccccceEEEEEecCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEE
Confidence 478888888888876555555665 4677777777777899999887664 222 222 2245567776 677777
Q ss_pred EeCCCCeEEEeeCCCCceEEec----------C------CCCCeEEEEECCCCCEEEEec
Q psy15612 76 STGKDNLLNAWRTPYGASIFQS----------K------ESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~~~~----------~------~~~~v~~~~~~~~~~~l~~~~ 119 (131)
-.-....|...|..+|+..... . ...-...+|+.|....+...+
T Consensus 190 NVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 190 NVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp EETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred EeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 7777788899999999987210 0 124578999998766555444
No 414
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=94.53 E-value=0.84 Score=30.18 Aligned_cols=54 Identities=11% Similarity=0.204 Sum_probs=38.9
Q ss_pred cceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCC
Q psy15612 60 SCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDK 113 (131)
Q Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~ 113 (131)
+++..++.||+|++++.-..++.+.+....-.+.. ........+..+.|..+..
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da 272 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA 272 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence 57899999999999999888899888876544444 3333345666777765543
No 415
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=94.53 E-value=0.49 Score=34.22 Aligned_cols=72 Identities=13% Similarity=0.126 Sum_probs=47.7
Q ss_pred EeCCCCceeee-ecCCCCeEEEEECCCCCEEEE-EeCCC-----cEEEEeCCCCC--eEEeeccccceEEEEEccCCCEE
Q psy15612 4 QSVSPGRQLQQ-HDFSSQIFSLGYCPSGEWLAV-GMENS-----NVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWF 74 (131)
Q Consensus 4 wd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~-~~~~~-----~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~ 74 (131)
=|......... +.....+.+.+|||||+.|+. .+.++ .|.+-++.+.. +.++......|..-...++|...
T Consensus 334 ~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~e~gdt~ 413 (912)
T TIGR02171 334 IDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVLENGDTV 413 (912)
T ss_pred EecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEecCCCCeE
Confidence 34443333334 567788999999999999987 44333 47777886543 34555556677777777777654
Q ss_pred E
Q psy15612 75 V 75 (131)
Q Consensus 75 ~ 75 (131)
+
T Consensus 414 i 414 (912)
T TIGR02171 414 I 414 (912)
T ss_pred E
Confidence 4
No 416
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=94.50 E-value=0.63 Score=28.55 Aligned_cols=74 Identities=8% Similarity=0.132 Sum_probs=47.8
Q ss_pred eeccccceEEEEEccCCC-EEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 55 LHLHESCVLSLRFAACGK-WFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 55 ~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+.+-...+..++|+|+.. .+++....+.|...+.. |+.+ .....-+..-.+++..++.++++.-.++.+.+.++
T Consensus 17 l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~ 93 (248)
T PF06977_consen 17 LPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTI 93 (248)
T ss_dssp -TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred CCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence 344455689999999754 66777888888888864 7766 22333466788888888887777656788877765
No 417
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=94.43 E-value=0.97 Score=32.86 Aligned_cols=75 Identities=11% Similarity=0.055 Sum_probs=50.3
Q ss_pred CcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEE-eCCCC-----eEEEeeCCCCc-e-EEecCCCCCeEEEEECC
Q psy15612 40 SNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVS-TGKDN-----LLNAWRTPYGA-S-IFQSKESSSVLSCDISA 110 (131)
Q Consensus 40 ~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~-~~~~~-----~i~~w~~~~~~-~-~~~~~~~~~v~~~~~~~ 110 (131)
+.+.+-|..+...+.+ ..+...+..-+|||||+.++- .+..+ .|++-++.+.. - +.+......|..-...+
T Consensus 329 ~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~e 408 (912)
T TIGR02171 329 GNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVLE 408 (912)
T ss_pred CeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEecC
Confidence 4788888887776656 667888999999999999887 44433 47777876532 2 23433455555555566
Q ss_pred CCCE
Q psy15612 111 DDKY 114 (131)
Q Consensus 111 ~~~~ 114 (131)
+|..
T Consensus 409 ~gdt 412 (912)
T TIGR02171 409 NGDT 412 (912)
T ss_pred CCCe
Confidence 5553
No 418
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=94.41 E-value=0.98 Score=30.41 Aligned_cols=100 Identities=15% Similarity=0.137 Sum_probs=61.2
Q ss_pred CCCEEEEEeCCCcEEEE-eCCCCCe---E---EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCC
Q psy15612 29 SGEWLAVGMENSNVEVL-HALKPDK---Y---QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESS 101 (131)
Q Consensus 29 ~~~~l~~~~~~~~v~~~-~~~~~~~---~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~ 101 (131)
.|..+..++.||.+.-| |.+.... . .+.-...++..+.-..+.+-+++-...|++..+.....+.+.....-+
T Consensus 279 Gg~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~ 358 (733)
T COG4590 279 GGFSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQ 358 (733)
T ss_pred CceeEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhc
Confidence 34556777888888877 4443221 1 111122333333322234567788888888888766555554333444
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 102 SVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 102 ~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+..+++||.+.++++-. .++++++.+
T Consensus 359 ~~~~~~~Sp~~~~Ll~e~-~gki~~~~l 385 (733)
T COG4590 359 APQLVAMSPNQAYLLSED-QGKIRLAQL 385 (733)
T ss_pred CcceeeeCcccchheeec-CCceEEEEe
Confidence 677899999999987754 467887765
No 419
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=94.34 E-value=0.53 Score=27.05 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=23.2
Q ss_pred CCCeEEEEECCCC------CEEEEecCCCcEEEEEe
Q psy15612 100 SSSVLSCDISADD------KYIVTGSGDKKATVYEV 129 (131)
Q Consensus 100 ~~~v~~~~~~~~~------~~l~~~~~d~~i~vw~~ 129 (131)
...+..++|||.| -+|++...++.+.+|..
T Consensus 85 ~~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~ 120 (173)
T PF12657_consen 85 SSQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGP 120 (173)
T ss_pred cccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEec
Confidence 3488999999943 36778888999999863
No 420
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=94.33 E-value=0.84 Score=29.34 Aligned_cols=126 Identities=10% Similarity=-0.042 Sum_probs=67.4
Q ss_pred CEEEeCCCCceeeee--cC--CC----CeEEEEECCCCCEEEEE--eCCCcEEEEeCCCCCeEEeeccccceEEEEEccC
Q psy15612 1 MYLQSVSPGRQLQQH--DF--SS----QIFSLGYCPSGEWLAVG--MENSNVEVLHALKPDKYQLHLHESCVLSLRFAAC 70 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~--~~----~v~~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (131)
|.+||.++-+....+ .. .. ....+++++|+++++.. +-...|.+.|+..++......-++ |...-|.
T Consensus 69 v~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PG---C~~iyP~ 145 (342)
T PF06433_consen 69 VEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPG---CWLIYPS 145 (342)
T ss_dssp EEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTS---EEEEEEE
T ss_pred EEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCC---EEEEEec
Confidence 468999987766544 11 11 22456778999988765 445578999998887633222222 2222232
Q ss_pred -CCEEEEeCCCCeEEEeeCC-CCceE-----EecCCCC-CeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 71 -GKWFVSTGKDNLLNAWRTP-YGASI-----FQSKESS-SVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 71 -~~~~~~~~~~~~i~~w~~~-~~~~~-----~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+.|.+-+.||.+.-..+. .|+.. ....... ....-++...+..++..+.+|.|.--|+
T Consensus 146 ~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dl 212 (342)
T PF06433_consen 146 GNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADL 212 (342)
T ss_dssp ETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEE
T ss_pred CCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEec
Confidence 2456677778888777776 45544 1111122 2223344444444444555666655443
No 421
>KOG2444|consensus
Probab=94.21 E-value=0.17 Score=30.38 Aligned_cols=61 Identities=11% Similarity=0.194 Sum_probs=40.0
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCe-EEeeccc-cceEEEEEccCCCEEEEe--CCCCeEEEeeCC
Q psy15612 29 SGEWLAVGMENSNVEVLHALKPDK-YQLHLHE-SCVLSLRFAACGKWFVST--GKDNLLNAWRTP 89 (131)
Q Consensus 29 ~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~-~~v~~~~~~~~~~~~~~~--~~~~~i~~w~~~ 89 (131)
++.+..++..++.++.|+....+. .....|. ........+..+..+..+ |.+..++.|++.
T Consensus 113 ~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 113 DSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred ccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence 445677888899999999887664 3344454 344444455556666665 667777777765
No 422
>KOG2377|consensus
Probab=94.20 E-value=1.1 Score=30.17 Aligned_cols=94 Identities=9% Similarity=0.014 Sum_probs=57.9
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCC---eEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE---
Q psy15612 22 FSLGYCPSGEWLAVGMENSNVEVLHALKPD---KYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--- 94 (131)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--- 94 (131)
+.+-|....+.+++. ..|.+.=|...... ...+ ...+++|.+++||+|.+.++.--.++.+.+++....+..
T Consensus 26 ngvFfDDaNkqlfav-rSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~ 104 (657)
T KOG2377|consen 26 NGVFFDDANKQLFAV-RSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEY 104 (657)
T ss_pred cceeeccCcceEEEE-ecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHH
Confidence 344455444444433 33445556554332 1222 235679999999999999999999999999987433322
Q ss_pred --EecCCCCCeEEEEECCCCCEEEE
Q psy15612 95 --FQSKESSSVLSCDISADDKYIVT 117 (131)
Q Consensus 95 --~~~~~~~~v~~~~~~~~~~~l~~ 117 (131)
..+.....|....|+.. +-++.
T Consensus 105 ~~~ck~k~~~IlGF~W~~s-~e~A~ 128 (657)
T KOG2377|consen 105 TQECKTKNANILGFCWTSS-TEIAF 128 (657)
T ss_pred HHHhccCcceeEEEEEecC-eeEEE
Confidence 23334566888888766 33443
No 423
>PHA03098 kelch-like protein; Provisional
Probab=94.13 E-value=1.2 Score=30.38 Aligned_cols=65 Identities=8% Similarity=-0.039 Sum_probs=35.3
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCCeEEeecc--ccceEEEEEccCCCEEEEeCCC------CeEEEeeCCCCceE
Q psy15612 29 SGEWLAVGMEN-----SNVEVLHALKPDKYQLHLH--ESCVLSLRFAACGKWFVSTGKD------NLLNAWRTPYGASI 94 (131)
Q Consensus 29 ~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~------~~i~~w~~~~~~~~ 94 (131)
+++.++.|+.+ ..+..||..+..-...... ...-.+++ .-+++..+.|+.. +.+..||..+.+..
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~ 419 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWS 419 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeee
Confidence 56666777654 3467788876654332211 11111222 2356666666632 35788898877665
No 424
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=94.10 E-value=1 Score=29.29 Aligned_cols=99 Identities=13% Similarity=0.039 Sum_probs=56.1
Q ss_pred CCeEEEEECCCCCEEEEEe-----------CCC-cEEEEeCCC--CCe---EEeeccccceEEEEEccCCCEEEEeCCCC
Q psy15612 19 SQIFSLGYCPSGEWLAVGM-----------ENS-NVEVLHALK--PDK---YQLHLHESCVLSLRFAACGKWFVSTGKDN 81 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~-----------~~~-~v~~~~~~~--~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 81 (131)
.....++|.++|+++++.. ..+ .|.+++-.. ++. ..+...-.....+++.++| ++.++...
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~~ 91 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPPD 91 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCCe
Confidence 4577899999999877653 122 677766532 221 2233333456789999888 44444443
Q ss_pred eEEEeeCCC-----CceE-Eec--C-----CCCCeEEEEECCCCCEEEEec
Q psy15612 82 LLNAWRTPY-----GASI-FQS--K-----ESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 82 ~i~~w~~~~-----~~~~-~~~--~-----~~~~v~~~~~~~~~~~l~~~~ 119 (131)
..++.+... ++.. ... . +......+.|.|+|++.++.+
T Consensus 92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 333334421 1221 111 1 134477899999998766544
No 425
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=94.10 E-value=1.1 Score=29.61 Aligned_cols=72 Identities=17% Similarity=0.259 Sum_probs=48.3
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EE--eec------cccceEEEEEcc-----CC---CEEEEeCC
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQ--LHL------HESCVLSLRFAA-----CG---KWFVSTGK 79 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~--~~~------~~~~v~~~~~~~-----~~---~~~~~~~~ 79 (131)
..++|.+++.| +=.+++.|..+|.+.+.|+++..+ .. +.. ....+.++.|+. |+ -.+++|..
T Consensus 85 ~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn 163 (395)
T PF08596_consen 85 KQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTN 163 (395)
T ss_dssp -S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEET
T ss_pred cCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeC
Confidence 46889999997 566999999999999999988774 22 111 223566777762 33 35677788
Q ss_pred CCeEEEeeCC
Q psy15612 80 DNLLNAWRTP 89 (131)
Q Consensus 80 ~~~i~~w~~~ 89 (131)
.|.+.+|.+.
T Consensus 164 ~G~v~~fkIl 173 (395)
T PF08596_consen 164 SGNVLTFKIL 173 (395)
T ss_dssp TSEEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 8888888654
No 426
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=94.04 E-value=0.81 Score=28.08 Aligned_cols=103 Identities=15% Similarity=0.128 Sum_probs=62.4
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEe-CCCCCe--EEeecc--ccceEEEEEccCCCEEEEeC---CCCeEEEeeCC-
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLH-ALKPDK--YQLHLH--ESCVLSLRFAACGKWFVSTG---KDNLLNAWRTP- 89 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~-~~~~~~--~~~~~~--~~~v~~~~~~~~~~~~~~~~---~~~~i~~w~~~- 89 (131)
..+....|++++........+....++. ...+.. ..+... ...|..+++||||..++... .++.+.+=.+.
T Consensus 66 ~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r 145 (253)
T PF10647_consen 66 GSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVR 145 (253)
T ss_pred CccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEe
Confidence 4677888899877666655555555553 333332 222222 12799999999999877654 24555554322
Q ss_pred --CC--ceE---Ee--cCCCCCeEEEEECCCCCEEEEecCC
Q psy15612 90 --YG--ASI---FQ--SKESSSVLSCDISADDKYIVTGSGD 121 (131)
Q Consensus 90 --~~--~~~---~~--~~~~~~v~~~~~~~~~~~l~~~~~d 121 (131)
.+ ..+ .. ......+..++|.+++.+++.+...
T Consensus 146 ~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~ 186 (253)
T PF10647_consen 146 DGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSA 186 (253)
T ss_pred CCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCC
Confidence 23 111 11 1235678999999999987766553
No 427
>KOG2395|consensus
Probab=94.03 E-value=0.4 Score=32.54 Aligned_cols=65 Identities=14% Similarity=0.222 Sum_probs=46.5
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612 21 IFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR 87 (131)
Q Consensus 21 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~ 87 (131)
..|.+-.. ..+++.|+.+|.|++||-...+. ..+++-..+|..+..+.+|++++..+ +..+.+.+
T Consensus 433 Fsc~aTT~-sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~ 498 (644)
T KOG2395|consen 433 FSCFATTE-SGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLID 498 (644)
T ss_pred cceeeecC-CceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEE
Confidence 33444333 34778899999999999844443 45677788999999999999988776 44444444
No 428
>PHA03098 kelch-like protein; Provisional
Probab=94.00 E-value=1.3 Score=30.25 Aligned_cols=98 Identities=15% Similarity=0.091 Sum_probs=48.9
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCCeEEeecccc--ceEEEEEccCCCEEEEeCCC--------CeEEEeeCCCCc
Q psy15612 29 SGEWLAVGMEN------SNVEVLHALKPDKYQLHLHES--CVLSLRFAACGKWFVSTGKD--------NLLNAWRTPYGA 92 (131)
Q Consensus 29 ~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~--------~~i~~w~~~~~~ 92 (131)
+++..+.|+.. ..+..||..+.+-......+. .-.++ ...+++..+.|+.+ ..+..||..+.+
T Consensus 389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 467 (534)
T PHA03098 389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCA-IYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNK 467 (534)
T ss_pred CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceE-EEECCEEEEECCccCCCCCcccceEEEecCCCCc
Confidence 56666666532 347788887665433221111 11122 22345655666542 237888988877
Q ss_pred eEEecCC---CCCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612 93 SIFQSKE---SSSVLSCDISADDKYIVTGSGD-----KKATVYEV 129 (131)
Q Consensus 93 ~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~ 129 (131)
....... ......+. .+++.++.|+.+ ..+.++|+
T Consensus 468 W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~ 510 (534)
T PHA03098 468 WTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDD 510 (534)
T ss_pred eeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeC
Confidence 6632211 11111222 256666676653 35666664
No 429
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=93.94 E-value=1.4 Score=30.52 Aligned_cols=69 Identities=10% Similarity=0.014 Sum_probs=43.8
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEe-CCCCeEEEeeCCC
Q psy15612 22 FSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVST-GKDNLLNAWRTPY 90 (131)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w~~~~ 90 (131)
..+.|+|....|+.-.....-.+++..... +..=....+.|.|.+|.+||+.++.+ +..=..++||-..
T Consensus 116 QGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 116 QGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred CcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 467788888877665443333344554322 22223456789999999999987765 3344567898653
No 430
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=93.90 E-value=1 Score=28.71 Aligned_cols=84 Identities=8% Similarity=0.037 Sum_probs=56.7
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe-CCC-------------------CeEEEeeC
Q psy15612 29 SGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST-GKD-------------------NLLNAWRT 88 (131)
Q Consensus 29 ~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~-------------------~~i~~w~~ 88 (131)
+|++-++-+..+.+..+|..+++...+..-++....++|. |++++++ |.- ..+.+.|+
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~Va~vpG~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~vidl 289 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQPVAFLPGFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAVIDL 289 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEEEEECCCCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccEEEEEC
Confidence 4666667677788888888877765555556677788887 7777654 221 23778888
Q ss_pred CCCceE---EecCCCCCeEEEEECCCCCE
Q psy15612 89 PYGASI---FQSKESSSVLSCDISADDKY 114 (131)
Q Consensus 89 ~~~~~~---~~~~~~~~v~~~~~~~~~~~ 114 (131)
++|..+ ...+.-..+..+++-|.-+.
T Consensus 290 ~tG~vv~~l~feg~v~EifdV~vLPg~r~ 318 (335)
T TIGR03032 290 NSGDVVHWLRFEGVIEEIYDVAVLPGVRR 318 (335)
T ss_pred CCCCEEEEEEeCCceeEEEEEEEecCCCC
Confidence 888876 23334466777887776443
No 431
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=93.90 E-value=1.3 Score=29.98 Aligned_cols=93 Identities=12% Similarity=0.128 Sum_probs=50.8
Q ss_pred EEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE-----------------eCCCCeEEEeeCCCCceE
Q psy15612 32 WLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS-----------------TGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 32 ~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----------------~~~~~~i~~w~~~~~~~~ 94 (131)
.++.++.++.+..+|.++++..-..... ...+..+| +..++. ...++.+.-.|..+|+.+
T Consensus 303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~--~~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~ 379 (488)
T cd00216 303 AIVHAPKNGFFYVLDRTTGKLISARPEV--EQPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVV 379 (488)
T ss_pred EEEEECCCceEEEEECCCCcEeeEeEee--ccccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEe
Confidence 4677788999999999998852211100 01122333 222221 123567888888888887
Q ss_pred EecCCC---------CCe--EEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 95 FQSKES---------SSV--LSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 95 ~~~~~~---------~~v--~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
-..... ... ..+. -.+..++.++.|+.+..+|.
T Consensus 380 W~~~~~~~~~~~~~g~~~~~~~~~--~~g~~v~~g~~dG~l~ald~ 423 (488)
T cd00216 380 WEKREGTIRDSWNIGFPHWGGSLA--TAGNLVFAGAADGYFRAFDA 423 (488)
T ss_pred eEeeCCccccccccCCcccCcceE--ecCCeEEEECCCCeEEEEEC
Confidence 222211 111 1111 14566777778888877764
No 432
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=93.38 E-value=0.28 Score=20.52 Aligned_cols=25 Identities=24% Similarity=0.296 Sum_probs=17.9
Q ss_pred CCCCEEEEEe-CCCcEEEEeCCCCCe
Q psy15612 28 PSGEWLAVGM-ENSNVEVLHALKPDK 52 (131)
Q Consensus 28 ~~~~~l~~~~-~~~~v~~~~~~~~~~ 52 (131)
|+++.|+.+. .++.|.++|..+...
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~ 26 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKV 26 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeE
Confidence 5677666544 477899999977765
No 433
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=93.18 E-value=1.1 Score=26.84 Aligned_cols=99 Identities=17% Similarity=0.264 Sum_probs=58.7
Q ss_pred CEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEEeCCC---C---eEEEe-eCCCC----ceE---
Q psy15612 31 EWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVSTGKD---N---LLNAW-RTPYG----ASI--- 94 (131)
Q Consensus 31 ~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~---~i~~w-~~~~~----~~~--- 94 (131)
..|+.+.....|.+|++..... .....--+.|..+.+++.|.++++--.+ . .+++| |++.. +++
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vR 108 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVR 108 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEE
Confidence 3444445566799999984443 2223334788999999999999875322 2 45554 33211 111
Q ss_pred --------------------EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEeeC
Q psy15612 95 --------------------FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 95 --------------------~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~~ 131 (131)
...+....+.+++..|. |+++ .|+. +++.+|.+.|
T Consensus 109 iaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~Ll-Vg~~-~~l~lf~l~~ 164 (215)
T PF14761_consen 109 IAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLL-VGCG-NKLVLFTLKY 164 (215)
T ss_pred EcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEE-EEcC-CEEEEEEEEE
Confidence 11123456778888874 5544 5543 5788888753
No 434
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=93.11 E-value=1.1 Score=26.79 Aligned_cols=48 Identities=13% Similarity=0.050 Sum_probs=35.0
Q ss_pred EEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecC
Q psy15612 73 WFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
.+..+...+.|.+|++.+.... .....-+.|..+.++..|.++++--.
T Consensus 30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~ 79 (215)
T PF14761_consen 30 ALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEE 79 (215)
T ss_pred eEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEe
Confidence 3434456777999999843333 45556689999999999999998643
No 435
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=93.00 E-value=1.5 Score=27.80 Aligned_cols=68 Identities=12% Similarity=0.205 Sum_probs=43.7
Q ss_pred ceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCe-----EEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 61 CVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSV-----LSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v-----~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
.+.++...++|.+|+++-.-..|.+.+.++|+.+ .+.+....- ...++-.+.+++-.+..++.|.++|
T Consensus 145 HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFD 218 (299)
T PF14269_consen 145 HINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFD 218 (299)
T ss_pred EeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEc
Confidence 3567777888999999888888999999999988 443331111 1233334444444444566666665
No 436
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=92.99 E-value=1.3 Score=30.39 Aligned_cols=51 Identities=10% Similarity=0.120 Sum_probs=33.3
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK 52 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~ 52 (131)
.-+|+.+++.........+...-.....+..++.+..++.++.+|.++++.
T Consensus 444 ~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~ 494 (527)
T TIGR03075 444 IAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEE 494 (527)
T ss_pred EEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCE
Confidence 457888888877663332211111112455677788899999999999985
No 437
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=92.61 E-value=1.9 Score=28.06 Aligned_cols=98 Identities=11% Similarity=0.095 Sum_probs=53.7
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEE-eCCCC-----CeEE----eec----cccceEEEEEccCCCEEEEeCCC----
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVL-HALKP-----DKYQ----LHL----HESCVLSLRFAACGKWFVSTGKD---- 80 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~-~~~~~-----~~~~----~~~----~~~~v~~~~~~~~~~~~~~~~~~---- 80 (131)
.....+++.+++ .++ +... .|..+ +.... +... +.. +......++|.|||...++.+..
T Consensus 72 ~~p~Gi~~~~~G-lyV-~~~~-~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~ 148 (367)
T TIGR02604 72 SMVTGLAVAVGG-VYV-ATPP-DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASK 148 (367)
T ss_pred CCccceeEecCC-EEE-eCCC-eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCce
Confidence 345778888888 443 3333 35444 44321 2111 111 12346789999999865543311
Q ss_pred ---------------CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEec
Q psy15612 81 ---------------NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 81 ---------------~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 119 (131)
+.+.-++..+++.......-.....++|+|+|+++++-.
T Consensus 149 ~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 149 VTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred eccCCCccCcccccCceEEEEecCCCeEEEEecCcCCCccceECCCCCEEEEcc
Confidence 335555555444432222234456899999999876644
No 438
>KOG1900|consensus
Probab=92.57 E-value=3.7 Score=31.30 Aligned_cols=129 Identities=14% Similarity=0.233 Sum_probs=73.6
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEE-CC-------CCCEEEEEeCCCcEEEEeCC----CCCe------EEeeccccc
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGY-CP-------SGEWLAVGMENSNVEVLHAL----KPDK------YQLHLHESC 61 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~-~~-------~~~~l~~~~~~~~v~~~~~~----~~~~------~~~~~~~~~ 61 (131)
+.+|+.+++.....+ +....|..+.. -| .=++++.-..--.+.++-+. +... .++......
T Consensus 101 L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~~dg~~ 180 (1311)
T KOG1900|consen 101 LFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKISVDGVS 180 (1311)
T ss_pred EEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeeecCCce
Confidence 468999886666555 44444555544 22 22222222222335554332 2221 223344667
Q ss_pred eEEEEEccCCCEEEEeCCCCeEEEe--eCCCC---c-eE-----------------Eec-CCCCCeEEEEECCCCCEEEE
Q psy15612 62 VLSLRFAACGKWFVSTGKDNLLNAW--RTPYG---A-SI-----------------FQS-KESSSVLSCDISADDKYIVT 117 (131)
Q Consensus 62 v~~~~~~~~~~~~~~~~~~~~i~~w--~~~~~---~-~~-----------------~~~-~~~~~v~~~~~~~~~~~l~~ 117 (131)
|.++....+|+.|++|- |+.++=. ...++ + +. ... .+.++|..+.....-..+.+
T Consensus 181 V~~I~~t~nGRIF~~G~-dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~IlY~ 259 (1311)
T KOG1900|consen 181 VNCITYTENGRIFFAGR-DGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNILYV 259 (1311)
T ss_pred EEEEEeccCCcEEEeec-CCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEeccccceeee
Confidence 88999888899887665 4443322 21111 1 10 011 34678999999888788899
Q ss_pred ecCCCcEEEEEee
Q psy15612 118 GSGDKKATVYEVI 130 (131)
Q Consensus 118 ~~~d~~i~vw~~~ 130 (131)
-+..+++.+||+.
T Consensus 260 lsek~~v~~Y~i~ 272 (1311)
T KOG1900|consen 260 LSEKGTVSAYDIG 272 (1311)
T ss_pred eccCceEEEEEcc
Confidence 9999999999973
No 439
>KOG4441|consensus
Probab=92.53 E-value=2.5 Score=29.39 Aligned_cols=92 Identities=17% Similarity=0.140 Sum_probs=51.3
Q ss_pred CCCEEEEEeCCCc-----EEEEeCCCCCeEEeeccccceEEEEEc-cCCCEEEEeCCCC------eEEEeeCCCCceEEe
Q psy15612 29 SGEWLAVGMENSN-----VEVLHALKPDKYQLHLHESCVLSLRFA-ACGKWFVSTGKDN------LLNAWRTPYGASIFQ 96 (131)
Q Consensus 29 ~~~~l~~~~~~~~-----v~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~------~i~~w~~~~~~~~~~ 96 (131)
+|...++|+.|+. +..||..+.+-.............+.. -+|...+.|+.++ .+..||..+.+....
T Consensus 380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~ 459 (571)
T KOG4441|consen 380 DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLI 459 (571)
T ss_pred CCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeec
Confidence 6777788888764 777888877654333222222222222 2577777777543 477889888877632
Q ss_pred cCC---CCCeEEEEECCCCCEEEEecCCC
Q psy15612 97 SKE---SSSVLSCDISADDKYIVTGSGDK 122 (131)
Q Consensus 97 ~~~---~~~v~~~~~~~~~~~l~~~~~d~ 122 (131)
... ..... ++ .-++.+.+.|+.|+
T Consensus 460 ~~M~~~R~~~g-~a-~~~~~iYvvGG~~~ 486 (571)
T KOG4441|consen 460 APMNTRRSGFG-VA-VLNGKIYVVGGFDG 486 (571)
T ss_pred CCcccccccce-EE-EECCEEEEECCccC
Confidence 221 11111 22 22556666776665
No 440
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=92.38 E-value=0.81 Score=23.30 Aligned_cols=40 Identities=8% Similarity=0.070 Sum_probs=28.3
Q ss_pred CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe
Q psy15612 79 KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 118 (131)
..|.+..||+.+++...+...-.....+++++++.+++.+
T Consensus 35 ~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 35 PTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVA 74 (89)
T ss_dssp --EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEE
T ss_pred CCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEE
Confidence 3566888999988876555445678899999999976543
No 441
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=92.37 E-value=1.7 Score=26.99 Aligned_cols=115 Identities=9% Similarity=-0.021 Sum_probs=65.4
Q ss_pred eeeecCCCC--eEEEEECCCCCEEEEEeCCC--cEEEEeCCCCCeEEeeccccc--eEEEEEccCCCEEEEeCCCCeEEE
Q psy15612 12 LQQHDFSSQ--IFSLGYCPSGEWLAVGMENS--NVEVLHALKPDKYQLHLHESC--VLSLRFAACGKWFVSTGKDNLLNA 85 (131)
Q Consensus 12 ~~~~~~~~~--v~~~~~~~~~~~l~~~~~~~--~v~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~i~~ 85 (131)
+..+.|... -..+.|..++.++-+.+.-| .++.+|+.+++......-+.. -..++.. +++.....-.++...+
T Consensus 36 v~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~f~ 114 (264)
T PF05096_consen 36 VETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTGFV 114 (264)
T ss_dssp EEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEEEE
T ss_pred EEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeEEE
Confidence 344445443 45677767787777776655 588899999886433222222 2234433 2344455667888899
Q ss_pred eeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 86 WRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 86 w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
||..+-+.+......+.=..++ .+++.++......++..+|.
T Consensus 115 yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP 156 (264)
T PF05096_consen 115 YDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDP 156 (264)
T ss_dssp EETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-T
T ss_pred EccccceEEEEEecCCcceEEE--cCCCEEEEECCccceEEECC
Confidence 9998887773333334445565 35566665555567777764
No 442
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=92.31 E-value=1.8 Score=27.17 Aligned_cols=87 Identities=16% Similarity=0.156 Sum_probs=52.8
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEe------CCCcEEEEeCCCCCeEEeec-----cccceEEEEEc
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGM------ENSNVEVLHALKPDKYQLHL-----HESCVLSLRFA 68 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~------~~~~v~~~~~~~~~~~~~~~-----~~~~v~~~~~~ 68 (131)
|.+||..+.+-...- +..+.|.++.|..+.+.++.|. ....+..||+.+.....+.. -++++..+.+.
T Consensus 18 lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~~~~ 97 (281)
T PF12768_consen 18 LCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTALTFI 97 (281)
T ss_pred EEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEEEee
Confidence 457887765544333 5678899999986676766653 34567889988777544443 23567777664
Q ss_pred c-CCCEEE-EeC-C--CCeEEEee
Q psy15612 69 A-CGKWFV-STG-K--DNLLNAWR 87 (131)
Q Consensus 69 ~-~~~~~~-~~~-~--~~~i~~w~ 87 (131)
. |+..+. .+. . +..+..||
T Consensus 98 ~~d~~~~~~aG~~~~g~~~l~~~d 121 (281)
T PF12768_consen 98 SNDGSNFWVAGRSANGSTFLMKYD 121 (281)
T ss_pred ccCCceEEEeceecCCCceEEEEc
Confidence 3 444333 332 2 23355665
No 443
>KOG4460|consensus
Probab=92.29 E-value=2.6 Score=29.02 Aligned_cols=74 Identities=8% Similarity=0.088 Sum_probs=49.4
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCC----------CCC----eEEe--------eccccceEEEEEccCC---CEE
Q psy15612 20 QIFSLGYCPSGEWLAVGMENSNVEVLHAL----------KPD----KYQL--------HLHESCVLSLRFAACG---KWF 74 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~----------~~~----~~~~--------~~~~~~v~~~~~~~~~---~~~ 74 (131)
.|..+..++.|..++..+.+|.+.+ .+. .++ ++.+ ....-.+..++|+|+. ..+
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vM-eLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL 183 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVM-ELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL 183 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEE-EchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence 4677788999999988888884443 331 111 1111 1122346678999964 677
Q ss_pred EEeCCCCeEEEeeCCCCceE
Q psy15612 75 VSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~~~ 94 (131)
..-+.|+.+++||......+
T Consensus 184 ~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 184 VLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred EEEecCcEEEEEecCCcchh
Confidence 77788999999998866665
No 444
>KOG4499|consensus
Probab=92.06 E-value=1.8 Score=26.58 Aligned_cols=46 Identities=11% Similarity=0.172 Sum_probs=36.1
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEc
Q psy15612 23 SLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFA 68 (131)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~ 68 (131)
.++...+|.+.+++-+.++|..+|..++++ ..+.-....+.+++|-
T Consensus 216 Gm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFg 262 (310)
T KOG4499|consen 216 GMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFG 262 (310)
T ss_pred cceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEec
Confidence 455566788888888889999999999986 5555567788999885
No 445
>KOG4460|consensus
Probab=91.92 E-value=3 Score=28.80 Aligned_cols=70 Identities=17% Similarity=0.171 Sum_probs=48.0
Q ss_pred cceEEEEEccCCCEEEEeCCCCeEEEe-----e----CCCCceE------------EecCCCCCeEEEEECCCC---CEE
Q psy15612 60 SCVLSLRFAACGKWFVSTGKDNLLNAW-----R----TPYGASI------------FQSKESSSVLSCDISADD---KYI 115 (131)
Q Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~i~~w-----~----~~~~~~~------------~~~~~~~~v~~~~~~~~~---~~l 115 (131)
-.|..+..++.|+.++..+.+|.+.+. . +.+|+.. +.....-.+...+|+|++ ..+
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL 183 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL 183 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence 456778889999999988888875543 2 2344332 111233456788999975 566
Q ss_pred EEecCCCcEEEEEe
Q psy15612 116 VTGSGDKKATVYEV 129 (131)
Q Consensus 116 ~~~~~d~~i~vw~~ 129 (131)
.....|..+++||+
T Consensus 184 ~iL~sdnviRiy~l 197 (741)
T KOG4460|consen 184 VLLTSDNVIRIYSL 197 (741)
T ss_pred EEEecCcEEEEEec
Confidence 66777899999986
No 446
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=91.80 E-value=3.1 Score=28.69 Aligned_cols=25 Identities=12% Similarity=0.271 Sum_probs=21.1
Q ss_pred CCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 70 CGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 70 ~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
.+..++.++.++.++.+|.++|+.+
T Consensus 471 ~g~lvf~g~~~G~l~a~D~~TGe~l 495 (527)
T TIGR03075 471 AGDLVFYGTLEGYFKAFDAKTGEEL 495 (527)
T ss_pred CCcEEEEECCCCeEEEEECCCCCEe
Confidence 3456667788999999999999998
No 447
>KOG3616|consensus
Probab=91.74 E-value=0.96 Score=32.50 Aligned_cols=36 Identities=6% Similarity=0.159 Sum_probs=29.6
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD 51 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~ 51 (131)
.....+.++.-+|.++.++.+..|+.+.+|+.....
T Consensus 12 k~~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~ 47 (1636)
T KOG3616|consen 12 KEDEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRR 47 (1636)
T ss_pred cccceeeeeeecCCCceEEEEecCCcEEEEeecccc
Confidence 344567788888999999999999999999986544
No 448
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=91.44 E-value=0.44 Score=18.30 Aligned_cols=26 Identities=19% Similarity=0.391 Sum_probs=18.4
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612 102 SVLSCDISADDKYIVTGSGDKKATVY 127 (131)
Q Consensus 102 ~v~~~~~~~~~~~l~~~~~d~~i~vw 127 (131)
.+..++++++|+.+++-+..+.|+++
T Consensus 3 ~P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 3 YPHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp SEEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CCcEEEEeCCCCEEEEECCCCEEEEC
Confidence 35677888888877777766766654
No 449
>KOG1900|consensus
Probab=91.40 E-value=4.5 Score=30.88 Aligned_cols=92 Identities=13% Similarity=0.165 Sum_probs=54.4
Q ss_pred eCCCcEEEEeCCCC-CeEEeeccccceEEEEE--------ccCCCEEEEeCCCCeEEEeeCC----CCceE-E-----ec
Q psy15612 37 MENSNVEVLHALKP-DKYQLHLHESCVLSLRF--------AACGKWFVSTGKDNLLNAWRTP----YGASI-F-----QS 97 (131)
Q Consensus 37 ~~~~~v~~~~~~~~-~~~~~~~~~~~v~~~~~--------~~~~~~~~~~~~~~~i~~w~~~----~~~~~-~-----~~ 97 (131)
+.|..+.+|+..++ +...+.+-...|..+.. .|.=++++..+.--.+.++.+. ++... + ..
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~ 175 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS 175 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence 45778999999874 44555555555555443 2333444444444445555332 22222 1 11
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612 98 KESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 98 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 131 (131)
..+-.|.++....+|+.+++|- || .+|.+.|
T Consensus 176 ~dg~~V~~I~~t~nGRIF~~G~-dg--~lyEl~Y 206 (1311)
T KOG1900|consen 176 VDGVSVNCITYTENGRIFFAGR-DG--NLYELVY 206 (1311)
T ss_pred cCCceEEEEEeccCCcEEEeec-CC--CEEEEEE
Confidence 2467789999888999887764 45 6888876
No 450
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=91.38 E-value=3.2 Score=28.07 Aligned_cols=105 Identities=7% Similarity=0.009 Sum_probs=60.4
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE------e-e-ccccceEEEEEccCC------CEEEEeC---
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ------L-H-LHESCVLSLRFAACG------KWFVSTG--- 78 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~------~-~-~~~~~v~~~~~~~~~------~~~~~~~--- 78 (131)
..-.....|+|.|++++|++--..|.|++++..+..... + . ........++++|+- ++++...
T Consensus 27 ~GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~ 106 (454)
T TIGR03606 27 SGLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYK 106 (454)
T ss_pred CCCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEecc
Confidence 344567889999999877765446899998765443211 1 1 135667899999874 2444331
Q ss_pred -------CCCeEEEeeCCCC-------ceEEe-c--CCCCCeEEEEECCCCCEEEEecC
Q psy15612 79 -------KDNLLNAWRTPYG-------ASIFQ-S--KESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 79 -------~~~~i~~w~~~~~-------~~~~~-~--~~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
....|.-|.+... +.+.. . ...+.-..+.|.|+|.++++.+.
T Consensus 107 ~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~GD 165 (454)
T TIGR03606 107 NGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIGE 165 (454)
T ss_pred CCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEECC
Confidence 1233444544311 11111 1 11233457889999987765544
No 451
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=91.24 E-value=4.4 Score=29.39 Aligned_cols=92 Identities=12% Similarity=-0.016 Sum_probs=61.2
Q ss_pred CCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC------eEEeecccc----------ceEEEEEccCCCEEEEeCCCC
Q psy15612 19 SQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD------KYQLHLHES----------CVLSLRFAACGKWFVSTGKDN 81 (131)
Q Consensus 19 ~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~------~~~~~~~~~----------~v~~~~~~~~~~~~~~~~~~~ 81 (131)
.+...++|+|. ...+|..+..|...+|++.... ........+ .-..+.|.++-+.++.+++.
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~- 224 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRS- 224 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCC-
Confidence 35788999984 5688999999999999992111 111111112 22368898887888777754
Q ss_pred eEEEeeCCCCceE---EecCCCCCeEEEEECCC
Q psy15612 82 LLNAWRTPYGASI---FQSKESSSVLSCDISAD 111 (131)
Q Consensus 82 ~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~ 111 (131)
.+.++|+.+.... ........|..+.-+|.
T Consensus 225 ~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~ 257 (765)
T PF10214_consen 225 KLMLIDFESNWQTEYLVTAKTWSWILDVKRSPD 257 (765)
T ss_pred ceEEEECCCCCccchhccCCChhheeeEEecCC
Confidence 5678888876552 33345577888887776
No 452
>KOG0918|consensus
Probab=91.15 E-value=3.1 Score=27.55 Aligned_cols=93 Identities=8% Similarity=0.085 Sum_probs=56.4
Q ss_pred CEEEeCCCCceeeee--cC-CCCeEEEEEC--CC--CCEEEEEeCCCcEEEEeCCCCC--eE-------------Eeecc
Q psy15612 1 MYLQSVSPGRQLQQH--DF-SSQIFSLGYC--PS--GEWLAVGMENSNVEVLHALKPD--KY-------------QLHLH 58 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~-~~~v~~~~~~--~~--~~~l~~~~~~~~v~~~~~~~~~--~~-------------~~~~~ 58 (131)
+.+|+.++++..+++ +. .-.+..+.|- |+ ..+..++..+...+++...... .. .....
T Consensus 231 lhvy~w~~~~~~QtidL~~~gllpleiRfLh~p~~~~~fvg~Al~s~i~~~~k~~~~tws~~~visvp~~kv~~w~~~eM 310 (476)
T KOG0918|consen 231 LHVYQWSPGELKQTIDLGDTGLLPLEIRFLHNPSKATGFVGCALSSNIFRFFKNSDDTWSAEVVISVPPLKVENWILPEM 310 (476)
T ss_pred eEEEecCCccceeEEecCCCCcceEEeeeccCCCcccceeeeeccCCceeeeeccccccceeEEEecCccccccccCccc
Confidence 367888888887777 22 3346777773 33 2344444445555555433221 10 11234
Q ss_pred ccceEEEEEccCCCEEEEeCC-CCeEEEeeCCCCce
Q psy15612 59 ESCVLSLRFAACGKWFVSTGK-DNLLNAWRTPYGAS 93 (131)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~-~~~i~~w~~~~~~~ 93 (131)
++-|.++-.|-|.++++.+.+ .|.|+-||+.+...
T Consensus 311 P~LITDilISmDDRFLYvs~WLHGDirQYdIsDP~n 346 (476)
T KOG0918|consen 311 PGLITDILISLDDRFLYVSNWLHGDIRQYDISDPKN 346 (476)
T ss_pred chhhheeEEeecCcEEEEEeeeecceeeeccCCCCC
Confidence 566888989999999887755 56788888775543
No 453
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=91.10 E-value=4.5 Score=29.34 Aligned_cols=65 Identities=14% Similarity=0.143 Sum_probs=39.3
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEeeccccce-------------EEEEEcc--CCCEEEEeCC----------CCeEE
Q psy15612 30 GEWLAVGMENSNVEVLHALKPDKYQLHLHESCV-------------LSLRFAA--CGKWFVSTGK----------DNLLN 84 (131)
Q Consensus 30 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v-------------~~~~~~~--~~~~~~~~~~----------~~~i~ 84 (131)
+..++.++.|+.+.-.|.++++..--....+.+ ....-+| .+..++.++. ++.|+
T Consensus 260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~ 339 (764)
T TIGR03074 260 ARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIR 339 (764)
T ss_pred CCEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEE
Confidence 447778888999999999988854221211111 0111122 1334444432 57799
Q ss_pred EeeCCCCceE
Q psy15612 85 AWRTPYGASI 94 (131)
Q Consensus 85 ~w~~~~~~~~ 94 (131)
-+|..+|+.+
T Consensus 340 A~Da~TGkl~ 349 (764)
T TIGR03074 340 AFDVNTGALV 349 (764)
T ss_pred EEECCCCcEe
Confidence 9999999988
No 454
>PRK10115 protease 2; Provisional
Probab=90.04 E-value=5.5 Score=28.53 Aligned_cols=57 Identities=5% Similarity=-0.165 Sum_probs=36.7
Q ss_pred ceEEEEEccCCCEEEEeCC-C----CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe
Q psy15612 61 CVLSLRFAACGKWFVSTGK-D----NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 61 ~v~~~~~~~~~~~~~~~~~-~----~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 118 (131)
.+..+.++|||++++.+.. + ..+++.|+.+|+.+...-.... ..++|.++++.|+-.
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~-~~~~w~~D~~~~~y~ 189 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE-PSFVWANDSWTFYYV 189 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc-eEEEEeeCCCEEEEE
Confidence 4667889999998876522 2 3488889988864411111111 469999998866544
No 455
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=89.94 E-value=2.1 Score=23.67 Aligned_cols=85 Identities=11% Similarity=0.041 Sum_probs=53.7
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCC--------eEEeeccccceEEEEEcc-----CCCEEEEeCCCCeEEEeeCCC
Q psy15612 24 LGYCPSGEWLAVGMENSNVEVLHALKPD--------KYQLHLHESCVLSLRFAA-----CGKWFVSTGKDNLLNAWRTPY 90 (131)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~i~~w~~~~ 90 (131)
-+|......|+++...++|.+++..... ...+..-...|.+++--+ +...|+.++ ...+..||...
T Consensus 4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~ 82 (136)
T PF14781_consen 4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVEN 82 (136)
T ss_pred EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEccc
Confidence 3555566678888888899999875332 112233344555554332 233455555 56688999987
Q ss_pred CceEEecCCCCCeEEEEEC
Q psy15612 91 GASIFQSKESSSVLSCDIS 109 (131)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~~ 109 (131)
-.-++.+..++.+.++.+.
T Consensus 83 N~d~Fyke~~DGvn~i~~g 101 (136)
T PF14781_consen 83 NSDLFYKEVPDGVNAIVIG 101 (136)
T ss_pred CchhhhhhCccceeEEEEE
Confidence 7777766677777777763
No 456
>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]
Probab=89.93 E-value=3.1 Score=30.67 Aligned_cols=93 Identities=16% Similarity=0.265 Sum_probs=51.2
Q ss_pred eCCCcEEEEeCCCCCe-EEeeccccceEEEEE-ccCCCEEE-------EeCCCCeEEEe----eCCCCceE-Ee-----c
Q psy15612 37 MENSNVEVLHALKPDK-YQLHLHESCVLSLRF-AACGKWFV-------STGKDNLLNAW----RTPYGASI-FQ-----S 97 (131)
Q Consensus 37 ~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~-~~~~~~~~-------~~~~~~~i~~w----~~~~~~~~-~~-----~ 97 (131)
..|..+.+|+..++.. +.+..-...|..++. -|..+.++ .......+.++ |.++++.- +. .
T Consensus 99 T~dnkLiLWnynn~neyq~idd~shtIlkVkLvrPkantFvs~i~hlL~vAT~~e~~ilgvs~d~~T~Els~fnTgl~vs 178 (1263)
T COG5308 99 TNDNKLILWNYNNSNEYQEIDDFSHTILKVKLVRPKANTFVSRISHLLFVATEKEVMILGVSKDTKTGELSLFNTGLVVS 178 (1263)
T ss_pred EcCCEEEEEecCCCcchhhhhhhhhheeEEEEeccCCcccHHhhhhhhhhhhhheeeEEEEEeccccceeEEEecceEEe
Confidence 4577899999986553 222222233333332 23322221 11112223333 44455544 21 2
Q ss_pred CCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612 98 KESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 98 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 131 (131)
..+-.|.|+.-+.+|+.+.+|..| ..+|.+.|
T Consensus 179 vqGinV~civs~e~GrIFf~g~~d--~nvyEl~Y 210 (1263)
T COG5308 179 VQGINVRCIVSEEDGRIFFGGEND--PNVYELVY 210 (1263)
T ss_pred ccCceeEEEEeccCCcEEEecCCC--CCeEEEEE
Confidence 245678888888889988887666 88999876
No 457
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=89.55 E-value=4.8 Score=27.14 Aligned_cols=128 Identities=13% Similarity=0.129 Sum_probs=59.7
Q ss_pred EEeCCCCceeeeecC----CCCeEEEEECCCCCEEEEEeC--------------------CCcEEEEeCCCCCeEE-eec
Q psy15612 3 LQSVSPGRQLQQHDF----SSQIFSLGYCPSGEWLAVGME--------------------NSNVEVLHALKPDKYQ-LHL 57 (131)
Q Consensus 3 iwd~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~--------------------~~~v~~~~~~~~~~~~-~~~ 57 (131)
+.|-++.+....... ..--+.+-|.|..+.+++... ..++.+||+.+.+..+ +.-
T Consensus 161 llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idL 240 (461)
T PF05694_consen 161 LLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDL 240 (461)
T ss_dssp EE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES
T ss_pred EEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEec
Confidence 445555555544422 223466777787777776432 3579999999888643 322
Q ss_pred --cccceEEEEEccC--CCE-EEEeCCCCeEEEe-eCCCCceEE----ecC------------------CCCCeEEEEEC
Q psy15612 58 --HESCVLSLRFAAC--GKW-FVSTGKDNLLNAW-RTPYGASIF----QSK------------------ESSSVLSCDIS 109 (131)
Q Consensus 58 --~~~~v~~~~~~~~--~~~-~~~~~~~~~i~~w-~~~~~~~~~----~~~------------------~~~~v~~~~~~ 109 (131)
....+..++|..+ ..+ ++.+.-..+|..| ....++... ..+ .+.-++.+..|
T Consensus 241 g~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iS 320 (461)
T PF05694_consen 241 GEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILIS 320 (461)
T ss_dssp -TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-
T ss_pred CCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEc
Confidence 2235677887654 333 3333334444444 324444320 000 14567899999
Q ss_pred CCCCEEEEec-CCCcEEEEEee
Q psy15612 110 ADDKYIVTGS-GDKKATVYEVI 130 (131)
Q Consensus 110 ~~~~~l~~~~-~d~~i~vw~~~ 130 (131)
.|.++|...+ .+|.++.||+.
T Consensus 321 lDDrfLYvs~W~~GdvrqYDIS 342 (461)
T PF05694_consen 321 LDDRFLYVSNWLHGDVRQYDIS 342 (461)
T ss_dssp TTS-EEEEEETTTTEEEEEE-S
T ss_pred cCCCEEEEEcccCCcEEEEecC
Confidence 9999987655 48999999974
No 458
>KOG3616|consensus
Probab=89.45 E-value=1.9 Score=31.20 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=26.5
Q ss_pred ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612 59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG 91 (131)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 91 (131)
...+..+.-+|.|+.++.++.|+.+.+|+....
T Consensus 14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r 46 (1636)
T KOG3616|consen 14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPR 46 (1636)
T ss_pred cceeeeeeecCCCceEEEEecCCcEEEEeeccc
Confidence 345667777899999999999999999987543
No 459
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=89.36 E-value=4.8 Score=26.92 Aligned_cols=36 Identities=11% Similarity=0.025 Sum_probs=30.3
Q ss_pred ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
...+.++..+|++++.++...-|.|.++|+.++..+
T Consensus 307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vv 342 (415)
T PF14655_consen 307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVV 342 (415)
T ss_pred CceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhh
Confidence 345778999999999999888899999999877665
No 460
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=88.70 E-value=4.6 Score=25.98 Aligned_cols=65 Identities=17% Similarity=0.127 Sum_probs=40.3
Q ss_pred cceEEEEEcc-------CCCEEEEeCCCCeEEEeeCCCCceE-----EecCCCCCeEEEEECCCCCEEEEecCCCcE
Q psy15612 60 SCVLSLRFAA-------CGKWFVSTGKDNLLNAWRTPYGASI-----FQSKESSSVLSCDISADDKYIVTGSGDKKA 124 (131)
Q Consensus 60 ~~v~~~~~~~-------~~~~~~~~~~~~~i~~w~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 124 (131)
..+..+.|.. +|.+++..-..+.|....+..+... .......++..+++.|||.++++...+|+|
T Consensus 253 ~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~i 329 (331)
T PF07995_consen 253 SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKI 329 (331)
T ss_dssp --EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTE
T ss_pred cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeE
Confidence 4555666652 3556666665667777776544322 233455589999999999998888778875
No 461
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=88.68 E-value=1.9 Score=29.63 Aligned_cols=33 Identities=9% Similarity=0.017 Sum_probs=25.6
Q ss_pred CeEEEEECC----CCCEEEEEeCCCcEEEEeCCCCCe
Q psy15612 20 QIFSLGYCP----SGEWLAVGMENSNVEVLHALKPDK 52 (131)
Q Consensus 20 ~v~~~~~~~----~~~~l~~~~~~~~v~~~~~~~~~~ 52 (131)
.....+.++ +..++++.+.|+++++||+.++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~ 252 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQC 252 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeE
Confidence 455566666 677899999999999999999886
No 462
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=87.56 E-value=5.7 Score=25.59 Aligned_cols=52 Identities=13% Similarity=0.063 Sum_probs=37.1
Q ss_pred EEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe
Q psy15612 64 SLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 118 (131)
+..|+ +|+..++-+..+.+.-+|..+|+......-++....++|. |++++++
T Consensus 207 SPRWh-dgrLwvldsgtGev~~vD~~~G~~e~Va~vpG~~rGL~f~--G~llvVg 258 (335)
T TIGR03032 207 SPRWY-QGKLWLLNSGRGELGYVDPQAGKFQPVAFLPGFTRGLAFA--GDFAFVG 258 (335)
T ss_pred CCcEe-CCeEEEEECCCCEEEEEcCCCCcEEEEEECCCCCccccee--CCEEEEE
Confidence 34444 4777777788888998998888777444556677888887 7776554
No 463
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=87.07 E-value=5.2 Score=24.64 Aligned_cols=120 Identities=11% Similarity=0.114 Sum_probs=63.3
Q ss_pred EEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCC----CCeEEe---eccccceEEEEEccCC
Q psy15612 3 LQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALK----PDKYQL---HLHESCVLSLRFAACG 71 (131)
Q Consensus 3 iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~----~~~~~~---~~~~~~v~~~~~~~~~ 71 (131)
+||..+++..... ....-+.+-.+-|+|+++.+|+.. ..+++++... ...... -.....-....--|||
T Consensus 50 ~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~DG 129 (243)
T PF07250_consen 50 EYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPDG 129 (243)
T ss_pred EEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCCC
Confidence 6787776654322 333334445567899999887542 3477777644 111111 1111222234445799
Q ss_pred CEEEEeCCCCe-EEEeeCCC--CceE---EecC-----CCCCeEEEEECCCCCEEEEecCCC
Q psy15612 72 KWFVSTGKDNL-LNAWRTPY--GASI---FQSK-----ESSSVLSCDISADDKYIVTGSGDK 122 (131)
Q Consensus 72 ~~~~~~~~~~~-i~~w~~~~--~~~~---~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~ 122 (131)
+.++.++.... ..+|.... .... ++.. ...--..+...|+|++++.+..+.
T Consensus 130 ~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s 191 (243)
T PF07250_consen 130 RVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS 191 (243)
T ss_pred CEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc
Confidence 99988877643 44554421 1111 1111 111123566789999998887643
No 464
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=86.95 E-value=1.2 Score=17.34 Aligned_cols=22 Identities=18% Similarity=0.114 Sum_probs=17.6
Q ss_pred EEEEeCCCCeEEEeeCCCCceE
Q psy15612 73 WFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
.++.++.++.+..+|..+|+.+
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~ 29 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEIL 29 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEE
Confidence 4667778899999999888765
No 465
>KOG2280|consensus
Probab=86.19 E-value=11 Score=27.38 Aligned_cols=50 Identities=4% Similarity=0.088 Sum_probs=36.4
Q ss_pred CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCC
Q psy15612 40 SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY 90 (131)
Q Consensus 40 ~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~ 90 (131)
..+++|+..+....++......+..+.|+.+.. +++...+|.+.++++..
T Consensus 64 ~~I~If~~sG~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 64 PYIRIFNISGQLLGRILWKHGELIGMGWSDDEE-LICVQKDGTVHVYGLLG 113 (829)
T ss_pred eeEEEEeccccchHHHHhcCCCeeeecccCCce-EEEEeccceEEEeecch
Confidence 347888887766655444445888999997655 55667899999999863
No 466
>KOG2247|consensus
Probab=85.93 E-value=0.28 Score=32.95 Aligned_cols=52 Identities=10% Similarity=0.089 Sum_probs=41.0
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-cccceEEEEEccCCCEEE
Q psy15612 24 LGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-HESCVLSLRFAACGKWFV 75 (131)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~ 75 (131)
+.|++....++.+...+.+.+++-.+.+.....+ |...+.+.++.+.+..+.
T Consensus 123 l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil 175 (615)
T KOG2247|consen 123 LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVIL 175 (615)
T ss_pred HhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeee
Confidence 7788888888888889999999988776533334 888899999998766544
No 467
>PHA02790 Kelch-like protein; Provisional
Probab=85.85 E-value=8.9 Score=26.14 Aligned_cols=94 Identities=11% Similarity=-0.006 Sum_probs=47.9
Q ss_pred CCCEEEEEeCCC---cEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC---C
Q psy15612 29 SGEWLAVGMENS---NVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK---E 99 (131)
Q Consensus 29 ~~~~l~~~~~~~---~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~---~ 99 (131)
+|+..+.|+.++ .+..||..+..-..... .......+ .-+++..+.|+ ....||..+.+...... .
T Consensus 362 ~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~--~~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~ 436 (480)
T PHA02790 362 NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCAL--VFGRRLFLVGR---NAEFYCESSNTWTLIDDPIYP 436 (480)
T ss_pred CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEE--EECCEEEEECC---ceEEecCCCCcEeEcCCCCCC
Confidence 566667766543 46678887665433221 11111122 23455555553 36778988877763322 1
Q ss_pred CCCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612 100 SSSVLSCDISADDKYIVTGSGD-----KKATVYEV 129 (131)
Q Consensus 100 ~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~ 129 (131)
......+. -+++..+.|+.+ ..+..||.
T Consensus 437 r~~~~~~v--~~~~IYviGG~~~~~~~~~ve~Yd~ 469 (480)
T PHA02790 437 RDNPELII--VDNKLLLIGGFYRGSYIDTIEVYNN 469 (480)
T ss_pred ccccEEEE--ECCEEEEECCcCCCcccceEEEEEC
Confidence 22222222 256777777653 24666664
No 468
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=85.46 E-value=7.1 Score=24.65 Aligned_cols=71 Identities=8% Similarity=-0.009 Sum_probs=47.7
Q ss_pred CCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeC------CCCeEEEeeCCCCceEEecC-----CCCCeEEE
Q psy15612 39 NSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTG------KDNLLNAWRTPYGASIFQSK-----ESSSVLSC 106 (131)
Q Consensus 39 ~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~------~~~~i~~w~~~~~~~~~~~~-----~~~~v~~~ 106 (131)
...+++||..+.+-..+ ..-.+.|..+.|..+.+.++.|. ....+..||..+........ -++++..+
T Consensus 15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~ 94 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTAL 94 (281)
T ss_pred CCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEE
Confidence 34589999887775443 33567899999986666666552 34568889988777653222 35777777
Q ss_pred EEC
Q psy15612 107 DIS 109 (131)
Q Consensus 107 ~~~ 109 (131)
.+.
T Consensus 95 ~~~ 97 (281)
T PF12768_consen 95 TFI 97 (281)
T ss_pred Eee
Confidence 664
No 469
>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]
Probab=85.19 E-value=9.4 Score=25.84 Aligned_cols=76 Identities=5% Similarity=-0.008 Sum_probs=45.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-cccceEEEEEcc--CCCEEEEeCCCCe--EEEeeCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-HESCVLSLRFAA--CGKWFVSTGKDNL--LNAWRTPY 90 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~~~~~~~~~~--i~~w~~~~ 90 (131)
+..++|++++|..|-.++++--.-..+.+.|+...+..++.+ -+-+-.+--.+| .+..+-.|..++. |.+||+.+
T Consensus 425 ~~gERIYAvRf~gdv~yiVTfrqtDPlfviDlsNPenPkvlGeLKIPGfS~YLHpigen~~lGvG~~~g~vKiSLFdiSd 504 (603)
T COG4880 425 APGERIYAVRFVGDVLYIVTFRQTDPLFVIDLSNPENPKVLGELKIPGFSEYLHPIGENRLLGVGAYQGGVKISLFDISD 504 (603)
T ss_pred CCCceEEEEEEeCceEEEEEEeccCceEEEEcCCCCCCceeEEEecCCchhhccccCCCcEEEeecccCCceEEEEeccC
Confidence 567889999998887788887666678888998766322111 011111222344 3445556665665 56788764
Q ss_pred C
Q psy15612 91 G 91 (131)
Q Consensus 91 ~ 91 (131)
.
T Consensus 505 l 505 (603)
T COG4880 505 L 505 (603)
T ss_pred C
Confidence 3
No 470
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=85.11 E-value=5.4 Score=27.59 Aligned_cols=58 Identities=14% Similarity=0.183 Sum_probs=42.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeC
Q psy15612 30 GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRT 88 (131)
Q Consensus 30 ~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~ 88 (131)
..+++.++..|.+++||--..+. ..+++-...|..+..+.+|+++++.+.. .+.+-|+
T Consensus 573 sGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~ 631 (776)
T COG5167 573 SGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDV 631 (776)
T ss_pred CceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEec
Confidence 44788899999999999765553 4456667788899999999998776643 4444554
No 471
>KOG1897|consensus
Probab=85.01 E-value=14 Score=27.73 Aligned_cols=103 Identities=14% Similarity=0.049 Sum_probs=57.6
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCCeEEe--eccccceEEEEEccC--CC----EEEEeCCCCeEEEe-eCCCCceE--E
Q psy15612 27 CPSGEWLAVGMENSNVEVLHALKPDKYQL--HLHESCVLSLRFAAC--GK----WFVSTGKDNLLNAW-RTPYGASI--F 95 (131)
Q Consensus 27 ~~~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~v~~~~~~~~--~~----~~~~~~~~~~i~~w-~~~~~~~~--~ 95 (131)
+.+...++.++.++.+...++....++.. ......+.|+.++|- ++ .++.|.++..+.+. -..+...+ .
T Consensus 496 ~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~ 575 (1096)
T KOG1897|consen 496 SANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHE 575 (1096)
T ss_pred eecceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeee
Confidence 33444555555555555555554443222 233567889999973 22 57778776654433 33334433 2
Q ss_pred ecCC---CCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 96 QSKE---SSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 96 ~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.... +..+.-..+-.+..+|.++..||.+.-+.+
T Consensus 576 ~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~ 612 (1096)
T KOG1897|consen 576 QLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVL 612 (1096)
T ss_pred ccCCCccchheeeEEeeccceEEEEEcCCceEEEEEE
Confidence 2222 333444445556788889999998776654
No 472
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=84.96 E-value=5.6 Score=29.12 Aligned_cols=89 Identities=11% Similarity=0.080 Sum_probs=48.7
Q ss_pred EEEEECCCCCEEEEEeCCC-----cEEEEeCCCCCeEEe---eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612 22 FSLGYCPSGEWLAVGMENS-----NVEVLHALKPDKYQL---HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS 93 (131)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~-----~v~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 93 (131)
..+.|-|+|..+++-..|+ .|..+...+-+...+ .+.......++|+.....+ .....+.+.+|...+-..
T Consensus 250 ~~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vl-av~~~n~~~lwttkNyhW 328 (1243)
T COG5290 250 HQLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVL-AVAEGNLLKLWTTKNYHW 328 (1243)
T ss_pred hccccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHH-HHhhcceEEEEEccceEE
Confidence 4588999999998865443 355554433221111 1222334455665433333 234467789998876655
Q ss_pred E-EecCCCCCeEEEEECCC
Q psy15612 94 I-FQSKESSSVLSCDISAD 111 (131)
Q Consensus 94 ~-~~~~~~~~v~~~~~~~~ 111 (131)
- .....-..+.-+.|+|.
T Consensus 329 YLK~e~~ip~~s~vkwhpe 347 (1243)
T COG5290 329 YLKVERQIPGISYVKWHPE 347 (1243)
T ss_pred EEEEeecCCCcceeeeccc
Confidence 4 22233445566778875
No 473
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=84.77 E-value=8 Score=24.64 Aligned_cols=27 Identities=11% Similarity=-0.028 Sum_probs=16.6
Q ss_pred CCCCEEEEEeCCC----cEEEEeCCCCCeEE
Q psy15612 28 PSGEWLAVGMENS----NVEVLHALKPDKYQ 54 (131)
Q Consensus 28 ~~~~~l~~~~~~~----~v~~~~~~~~~~~~ 54 (131)
.++++.+.|+.++ .+..||..+.+-..
T Consensus 170 ~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~ 200 (323)
T TIGR03548 170 LQNELYVFGGGSNIAYTDGYKYSPKKNQWQK 200 (323)
T ss_pred ECCEEEEEcCCCCccccceEEEecCCCeeEE
Confidence 3566667776543 25678887766433
No 474
>KOG1520|consensus
Probab=84.06 E-value=9.8 Score=25.10 Aligned_cols=100 Identities=9% Similarity=-0.013 Sum_probs=53.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc-----ccceEEEEEccCCCEEEE-----------------
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH-----ESCVLSLRFAACGKWFVS----------------- 76 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~----------------- 76 (131)
++...++|...+.-|+.++.-.-+...+..++....+..+ -....++...++|....+
T Consensus 115 GRPLGl~f~~~ggdL~VaDAYlGL~~V~p~g~~a~~l~~~~~G~~~kf~N~ldI~~~g~vyFTDSSsk~~~rd~~~a~l~ 194 (376)
T KOG1520|consen 115 GRPLGIRFDKKGGDLYVADAYLGLLKVGPEGGLAELLADEAEGKPFKFLNDLDIDPEGVVYFTDSSSKYDRRDFVFAALE 194 (376)
T ss_pred CCcceEEeccCCCeEEEEecceeeEEECCCCCcceeccccccCeeeeecCceeEcCCCeEEEeccccccchhheEEeeec
Confidence 6788899988875555554433344445554442111110 011223333343332222
Q ss_pred eCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe
Q psy15612 77 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 118 (131)
+..+|.+.-||..+.....+...-.....++.||++.+++.+
T Consensus 195 g~~~GRl~~YD~~tK~~~VLld~L~F~NGlaLS~d~sfvl~~ 236 (376)
T KOG1520|consen 195 GDPTGRLFRYDPSTKVTKVLLDGLYFPNGLALSPDGSFVLVA 236 (376)
T ss_pred CCCccceEEecCcccchhhhhhcccccccccCCCCCCEEEEE
Confidence 223455666666655544444555667789999999987654
No 475
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=83.96 E-value=14 Score=26.94 Aligned_cols=69 Identities=10% Similarity=0.048 Sum_probs=44.1
Q ss_pred cceEEEEEcc-CCCEEEEeCCCCeEEEeeCCCCc------eEEecCCC----------CCeEEEEECCCCCEEEEecCCC
Q psy15612 60 SCVLSLRFAA-CGKWFVSTGKDNLLNAWRTPYGA------SIFQSKES----------SSVLSCDISADDKYIVTGSGDK 122 (131)
Q Consensus 60 ~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~------~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~d~ 122 (131)
.+..+++|+| +.+.|+.....|.-.+|++.... ........ +.-..+.|.++.+.|+..+. .
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r-~ 224 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR-S 224 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC-C
Confidence 4567899999 45689999999999999992111 11111111 22347778777776766654 4
Q ss_pred cEEEEEe
Q psy15612 123 KATVYEV 129 (131)
Q Consensus 123 ~i~vw~~ 129 (131)
.+.++|+
T Consensus 225 ~l~~~d~ 231 (765)
T PF10214_consen 225 KLMLIDF 231 (765)
T ss_pred ceEEEEC
Confidence 5666665
No 476
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.95 E-value=8.8 Score=24.49 Aligned_cols=120 Identities=8% Similarity=0.090 Sum_probs=68.9
Q ss_pred Cceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-e-----EEe----ecc-ccceEEEEEccCCCEEE
Q psy15612 9 GRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-K-----YQL----HLH-ESCVLSLRFAACGKWFV 75 (131)
Q Consensus 9 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~-----~~~----~~~-~~~v~~~~~~~~~~~~~ 75 (131)
|+.+..+ ..-.....+++..++++.++--.++.+.++.+.... . .++ ..+ ......++|.|....+.
T Consensus 117 GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~ 196 (316)
T COG3204 117 GDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLF 196 (316)
T ss_pred CceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEE
Confidence 4444444 122234456666677777777777888877665432 1 111 112 44577899999988888
Q ss_pred EeCCCCeEEEeeCCCCc-eE---EecCC-------CCCeEEEEECCCC-CEEEEecCCCcEEEEE
Q psy15612 76 STGKDNLLNAWRTPYGA-SI---FQSKE-------SSSVLSCDISADD-KYIVTGSGDKKATVYE 128 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~-~~---~~~~~-------~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~ 128 (131)
.+-..+-+.+|.+..+. .+ ....+ -..+..+.|++.. .+++.+.+++.+.-.|
T Consensus 197 ~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd 261 (316)
T COG3204 197 VAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVD 261 (316)
T ss_pred EEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceecCCCCcEEEEecCCceEEEEe
Confidence 88777777777665333 12 11111 1346777788654 4455555555555444
No 477
>KOG1520|consensus
Probab=83.71 E-value=8.3 Score=25.42 Aligned_cols=79 Identities=9% Similarity=-0.000 Sum_probs=45.8
Q ss_pred eCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC--CCeEEEeeCC--CCceE-EecCCCCCeEEEEECCC
Q psy15612 37 MENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK--DNLLNAWRTP--YGASI-FQSKESSSVLSCDISAD 111 (131)
Q Consensus 37 ~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~i~~w~~~--~~~~~-~~~~~~~~v~~~~~~~~ 111 (131)
..+|.+..||..+.....+...-.....++.|||+.+++.+-. .+..+.|=-. .|... +..+-++..-.+.-+++
T Consensus 196 ~~~GRl~~YD~~tK~~~VLld~L~F~NGlaLS~d~sfvl~~Et~~~ri~rywi~g~k~gt~EvFa~~LPG~PDNIR~~~~ 275 (376)
T KOG1520|consen 196 DPTGRLFRYDPSTKVTKVLLDGLYFPNGLALSPDGSFVLVAETTTARIKRYWIKGPKAGTSEVFAEGLPGYPDNIRRDST 275 (376)
T ss_pred CCccceEEecCcccchhhhhhcccccccccCCCCCCEEEEEeeccceeeeeEecCCccCchhhHhhcCCCCCcceeECCC
Confidence 3456677777776665444444455678999999998877632 2334455322 22222 33334555555666778
Q ss_pred CCEE
Q psy15612 112 DKYI 115 (131)
Q Consensus 112 ~~~l 115 (131)
|.+-
T Consensus 276 G~fW 279 (376)
T KOG1520|consen 276 GHFW 279 (376)
T ss_pred CCEE
Confidence 8653
No 478
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=83.44 E-value=5.4 Score=27.19 Aligned_cols=73 Identities=22% Similarity=0.159 Sum_probs=43.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeecc-cc----ceE-EEEEccCCCEEEEeCCCCeEEEe-
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLH-ES----CVL-SLRFAACGKWFVSTGKDNLLNAW- 86 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~-~~----~v~-~~~~~~~~~~~~~~~~~~~i~~w- 86 (131)
...+.+..+-..|||+.+..-+. .++.++++.+... +++... ++ .|. .+..-..|..++..+.||.+.-|
T Consensus 218 ~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWF 296 (733)
T COG4590 218 VPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWF 296 (733)
T ss_pred CCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeee
Confidence 34567888889999999877655 5788888865543 222111 11 111 11112245667778888887766
Q ss_pred eCC
Q psy15612 87 RTP 89 (131)
Q Consensus 87 ~~~ 89 (131)
|.+
T Consensus 297 dvr 299 (733)
T COG4590 297 DVR 299 (733)
T ss_pred eee
Confidence 554
No 479
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=81.96 E-value=17 Score=26.37 Aligned_cols=73 Identities=14% Similarity=0.138 Sum_probs=50.8
Q ss_pred cCCCCeEEEEEC--CCCCEEEEEeCCCcEEEEeCCCC--Ce--EEeeccccceEEEEEccCC---C---EEEEeCCCCeE
Q psy15612 16 DFSSQIFSLGYC--PSGEWLAVGMENSNVEVLHALKP--DK--YQLHLHESCVLSLRFAACG---K---WFVSTGKDNLL 83 (131)
Q Consensus 16 ~~~~~v~~~~~~--~~~~~l~~~~~~~~v~~~~~~~~--~~--~~~~~~~~~v~~~~~~~~~---~---~~~~~~~~~~i 83 (131)
..+..+..++++ ...++||.+++...|.+|-.... +. .....+...|.++.|-++. . ++++++-.|.+
T Consensus 161 ~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v 240 (717)
T PF08728_consen 161 RVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEV 240 (717)
T ss_pred ecCCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcE
Confidence 455678889988 77888888888888888765442 21 1122355678888887642 2 67777888888
Q ss_pred EEeeC
Q psy15612 84 NAWRT 88 (131)
Q Consensus 84 ~~w~~ 88 (131)
.+|++
T Consensus 241 ~~~~I 245 (717)
T PF08728_consen 241 WTFKI 245 (717)
T ss_pred EEEEE
Confidence 88776
No 480
>PLN02153 epithiospecifier protein
Probab=81.79 E-value=11 Score=24.20 Aligned_cols=65 Identities=15% Similarity=0.090 Sum_probs=33.9
Q ss_pred CCCEEEEEeCC-----------CcEEEEeCCCCCeEEeeccc-----cceEEEEEccCCCEEEEeCC-------------
Q psy15612 29 SGEWLAVGMEN-----------SNVEVLHALKPDKYQLHLHE-----SCVLSLRFAACGKWFVSTGK------------- 79 (131)
Q Consensus 29 ~~~~l~~~~~~-----------~~v~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~------------- 79 (131)
++++++.|+.+ ..+.+||..+..-..+.... ..-..+.. -+++..+.++.
T Consensus 137 ~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~gG~~~~~ 215 (341)
T PLN02153 137 ENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGAGFAV-VQGKIWVVYGFATSILPGGKSDYE 215 (341)
T ss_pred CCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcceEEE-ECCeEEEEeccccccccCCcccee
Confidence 45666666543 24677888776543332111 11112221 24555554432
Q ss_pred CCeEEEeeCCCCceE
Q psy15612 80 DNLLNAWRTPYGASI 94 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~ 94 (131)
.+.+.+||..+.+..
T Consensus 216 ~~~v~~yd~~~~~W~ 230 (341)
T PLN02153 216 SNAVQFFDPASGKWT 230 (341)
T ss_pred cCceEEEEcCCCcEE
Confidence 245888998877766
No 481
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=81.18 E-value=10 Score=23.39 Aligned_cols=46 Identities=11% Similarity=0.164 Sum_probs=29.9
Q ss_pred EEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecC-C--CcEEEEE
Q psy15612 83 LNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSG-D--KKATVYE 128 (131)
Q Consensus 83 i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-d--~~i~vw~ 128 (131)
-.+||+.+.+.. ...........-++-++|+++.+|+. + ..+++++
T Consensus 48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~ 97 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFT 97 (243)
T ss_pred EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEe
Confidence 457898888776 33334444555567789999988765 3 3466655
No 482
>PRK13684 Ycf48-like protein; Provisional
Probab=81.03 E-value=12 Score=24.14 Aligned_cols=103 Identities=13% Similarity=0.084 Sum_probs=56.6
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEE-EeCCCCCeEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-
Q psy15612 18 SSQIFSLGYCPSGEWLAVGMENSNVEV-LHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI- 94 (131)
Q Consensus 18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~-~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~- 94 (131)
...+..+.+.|++..++++. .|.+.. .+-....-... ......+..+.+.++++.++.+. .+.+.+=....|..-
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~-~G~~~~~s~d~G~sW~ 249 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSS-RGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLAR-GGQIRFNDPDDLESWS 249 (334)
T ss_pred cceEEEEEECCCCeEEEEeC-CceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEec-CCEEEEccCCCCCccc
Confidence 45678888899887665554 454432 22221122222 23345688899999988776654 565543223333322
Q ss_pred E-ecC---CCCCeEEEEECCCCCEEEEecCCCc
Q psy15612 95 F-QSK---ESSSVLSCDISADDKYIVTGSGDKK 123 (131)
Q Consensus 95 ~-~~~---~~~~v~~~~~~~~~~~l~~~~~d~~ 123 (131)
. ..+ ....+..+.+.|+++.++.+ .+|.
T Consensus 250 ~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~ 281 (334)
T PRK13684 250 KPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGT 281 (334)
T ss_pred cccCCccccccceeeEEEcCCCCEEEEc-CCCe
Confidence 1 111 22456788888887766554 3443
No 483
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=80.05 E-value=3.3 Score=17.00 Aligned_cols=21 Identities=19% Similarity=0.167 Sum_probs=17.8
Q ss_pred EEEeCCCCeEEEeeCCCCceE
Q psy15612 74 FVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~ 94 (131)
++.++.++.+.-.|.++|+.+
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~ 23 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVL 23 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEE
T ss_pred EEEeCCCCEEEEEECCCCCEE
Confidence 455688999999999999988
No 484
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=79.69 E-value=16 Score=24.49 Aligned_cols=100 Identities=12% Similarity=0.123 Sum_probs=52.6
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc-----eEE
Q psy15612 22 FSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA-----SIF 95 (131)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~-----~~~ 95 (131)
..+..++++..++.+.....++-+|-....-... ......+..+.+.+++..++.+. .+.+. +....++ ...
T Consensus 242 ~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~-~G~l~-~S~d~G~~~~~~~f~ 319 (398)
T PLN00033 242 STVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLTR-GGGLY-VSKGTGLTEEDFDFE 319 (398)
T ss_pred eeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEeC-CceEE-EecCCCCccccccee
Confidence 3345567777666654432222333322111111 22345678899999998887664 45443 3333343 111
Q ss_pred ec---CCCCCeEEEEECCCCCEEEEecCCCcE
Q psy15612 96 QS---KESSSVLSCDISADDKYIVTGSGDKKA 124 (131)
Q Consensus 96 ~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i 124 (131)
.. .....+..+.+.+++..+++|. +|.+
T Consensus 320 ~~~~~~~~~~l~~v~~~~d~~~~a~G~-~G~v 350 (398)
T PLN00033 320 EADIKSRGFGILDVGYRSKKEAWAAGG-SGIL 350 (398)
T ss_pred ecccCCCCcceEEEEEcCCCcEEEEEC-CCcE
Confidence 11 1234588888988877666653 4433
No 485
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=79.57 E-value=22 Score=26.07 Aligned_cols=68 Identities=10% Similarity=0.056 Sum_probs=46.8
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Ee----------e---------ccccceEEEEEccCCCEEEE
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QL----------H---------LHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~----------~---------~~~~~v~~~~~~~~~~~~~~ 76 (131)
....|.++....-+..++.+..||+|.++|..+-+.. .. . ..-..+..++|||.+..++.
T Consensus 258 ~~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~ 337 (753)
T PF11635_consen 258 LNKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQ 337 (753)
T ss_pred cCCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEE
Confidence 4456778887777888999999999999988655321 00 0 01113345789999888888
Q ss_pred eCCCCeEE
Q psy15612 77 TGKDNLLN 84 (131)
Q Consensus 77 ~~~~~~i~ 84 (131)
-..++.+.
T Consensus 338 ~~~~~~~~ 345 (753)
T PF11635_consen 338 IDEDGKTK 345 (753)
T ss_pred EecCCCce
Confidence 77777744
No 486
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=79.40 E-value=16 Score=25.42 Aligned_cols=21 Identities=10% Similarity=0.165 Sum_probs=16.8
Q ss_pred CCCCCeEEEEECCCCCEEEEe
Q psy15612 98 KESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 98 ~~~~~v~~~~~~~~~~~l~~~ 118 (131)
.....+..++|+|+++.|+..
T Consensus 499 P~gaE~tG~~fspDg~tlFvn 519 (524)
T PF05787_consen 499 PNGAEITGPCFSPDGRTLFVN 519 (524)
T ss_pred CCCcccccceECCCCCEEEEE
Confidence 457888999999999987653
No 487
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=78.24 E-value=19 Score=24.67 Aligned_cols=53 Identities=11% Similarity=0.120 Sum_probs=27.4
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccc---cceEEEEEccCCCEEEEeC
Q psy15612 24 LGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHE---SCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~ 78 (131)
+...++|.+++... ..+..+|+.+.......-.. ...+++..-|+|++++.+.
T Consensus 153 ~~~l~nG~ll~~~~--~~~~e~D~~G~v~~~~~l~~~~~~~HHD~~~l~nGn~L~l~~ 208 (477)
T PF05935_consen 153 FKQLPNGNLLIGSG--NRLYEIDLLGKVIWEYDLPGGYYDFHHDIDELPNGNLLILAS 208 (477)
T ss_dssp EEE-TTS-EEEEEB--TEEEEE-TT--EEEEEE--TTEE-B-S-EEE-TTS-EEEEEE
T ss_pred eeEcCCCCEEEecC--CceEEEcCCCCEEEeeecCCcccccccccEECCCCCEEEEEe
Confidence 56678888876654 67888888765433322212 2245777889999887766
No 488
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=76.44 E-value=4.6 Score=16.68 Aligned_cols=21 Identities=29% Similarity=0.395 Sum_probs=15.4
Q ss_pred CCCEEEEEeCCCcEEEEeCCC
Q psy15612 29 SGEWLAVGMENSNVEVLHALK 49 (131)
Q Consensus 29 ~~~~l~~~~~~~~v~~~~~~~ 49 (131)
.+..++.++.++.+..+|.++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 456788888899999988753
No 489
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=76.20 E-value=18 Score=23.31 Aligned_cols=99 Identities=10% Similarity=0.118 Sum_probs=60.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCc------EEEEeCCC--CC---e-----EEeecccc--------ceEEEEEccCCCEE
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSN------VEVLHALK--PD---K-----YQLHLHES--------CVLSLRFAACGKWF 74 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~------v~~~~~~~--~~---~-----~~~~~~~~--------~v~~~~~~~~~~~~ 74 (131)
+..+.+.+.|++..++..+.++. +..+++.. .. . ..+....+ ...++++.++|.++
T Consensus 20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~ 99 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW 99 (326)
T ss_pred CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence 56788999865555555566665 55555443 11 1 11111111 34478887788888
Q ss_pred EEeCCC------CeEEEeeCCCCceE-Ee---------------cCCCCCeEEEEECCCCCEEEEe
Q psy15612 75 VSTGKD------NLLNAWRTPYGASI-FQ---------------SKESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 75 ~~~~~~------~~i~~w~~~~~~~~-~~---------------~~~~~~v~~~~~~~~~~~l~~~ 118 (131)
++.-.+ ..|..++.. |+.. .. ...+...-.++++|+|+.|+++
T Consensus 100 is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~ 164 (326)
T PF13449_consen 100 ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAA 164 (326)
T ss_pred EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEE
Confidence 887777 778888866 5543 11 1134567899999999955543
No 490
>PLN02153 epithiospecifier protein
Probab=75.44 E-value=19 Score=23.21 Aligned_cols=66 Identities=14% Similarity=0.117 Sum_probs=34.5
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCCeEEeec------cccceEEEEEccCCCEEEEeCCC-----------CeEEEe
Q psy15612 29 SGEWLAVGMEN-----SNVEVLHALKPDKYQLHL------HESCVLSLRFAACGKWFVSTGKD-----------NLLNAW 86 (131)
Q Consensus 29 ~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~-----------~~i~~w 86 (131)
++++++.|+.+ ..+.+||..+.+-..+.. ...........-+++..+.|+.+ ..+.+|
T Consensus 85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~y 164 (341)
T PLN02153 85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAY 164 (341)
T ss_pred CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEE
Confidence 45566666542 247788887765433321 11111111122345666666543 246788
Q ss_pred eCCCCceE
Q psy15612 87 RTPYGASI 94 (131)
Q Consensus 87 ~~~~~~~~ 94 (131)
|..+.+..
T Consensus 165 d~~~~~W~ 172 (341)
T PLN02153 165 NIADGKWV 172 (341)
T ss_pred ECCCCeEe
Confidence 88877665
No 491
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=75.41 E-value=19 Score=23.20 Aligned_cols=98 Identities=8% Similarity=0.109 Sum_probs=59.8
Q ss_pred eEEEEECCCCCEEEEEeCC------CcEEEEeCCCCCeEEe--e-------------ccccceEEEEEccCCCEEEEeCC
Q psy15612 21 IFSLGYCPSGEWLAVGMEN------SNVEVLHALKPDKYQL--H-------------LHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 21 v~~~~~~~~~~~l~~~~~~------~~v~~~~~~~~~~~~~--~-------------~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
..++++.+++.++++.-.+ ..|..++........+ . ........++++|+|+.++++..
T Consensus 87 ~Egi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E 166 (326)
T PF13449_consen 87 PEGIAVPPDGSFWISSEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAME 166 (326)
T ss_pred hhHeEEecCCCEEEEeCCccCCCCCCEEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEEC
Confidence 4477777788888877666 7788888763222211 1 13345788999999996554422
Q ss_pred -----CC-----------eEEEeeCCC-CceE----EecC------CCCCeEEEEECCCCCEEEEe
Q psy15612 80 -----DN-----------LLNAWRTPY-GASI----FQSK------ESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 80 -----~~-----------~i~~w~~~~-~~~~----~~~~------~~~~v~~~~~~~~~~~l~~~ 118 (131)
|+ .+..+|..+ ++.. +... ....+..+.+-+++++++.-
T Consensus 167 ~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLE 232 (326)
T PF13449_consen 167 SPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLE 232 (326)
T ss_pred ccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEE
Confidence 21 233456554 2121 2322 45778889999999877653
No 492
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=74.96 E-value=9.2 Score=19.39 Aligned_cols=30 Identities=30% Similarity=0.340 Sum_probs=23.0
Q ss_pred CCeEEEEECCCCCEEEEecC-CCcEEEEEee
Q psy15612 101 SSVLSCDISADDKYIVTGSG-DKKATVYEVI 130 (131)
Q Consensus 101 ~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~~ 130 (131)
.....+.++|+++++..++. .+.|.++..+
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 45567899999998876654 6789998764
No 493
>PLN02193 nitrile-specifier protein
Probab=73.95 E-value=25 Score=23.99 Aligned_cols=90 Identities=9% Similarity=0.102 Sum_probs=44.6
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCCeEEeec------cccceEEEEEccCCCEEEEeCCC----CeEEEeeCCCCce
Q psy15612 29 SGEWLAVGMENS-----NVEVLHALKPDKYQLHL------HESCVLSLRFAACGKWFVSTGKD----NLLNAWRTPYGAS 93 (131)
Q Consensus 29 ~~~~l~~~~~~~-----~v~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~----~~i~~w~~~~~~~ 93 (131)
++++++.|+.++ .+..||+.+.+-..+.. ..... .+.. -+++..+.++.+ +.+.+||+.+.+.
T Consensus 278 ~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~-~~~~-~~gkiyviGG~~g~~~~dv~~yD~~t~~W 355 (470)
T PLN02193 278 EENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGA-GLEV-VQGKVWVVYGFNGCEVDDVHYYDPVQDKW 355 (470)
T ss_pred CCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCc-EEEE-ECCcEEEEECCCCCccCceEEEECCCCEE
Confidence 455566665432 36677877655333221 11111 1221 256666666654 4588999988777
Q ss_pred EEecC----CCCCeEEEEECCCCCEEEEecC
Q psy15612 94 IFQSK----ESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 94 ~~~~~----~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
..... ...+....+..-++++++.|+.
T Consensus 356 ~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~ 386 (470)
T PLN02193 356 TQVETFGVRPSERSVFASAAVGKHIVIFGGE 386 (470)
T ss_pred EEeccCCCCCCCcceeEEEEECCEEEEECCc
Confidence 63321 1111111122235566677664
No 494
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=72.27 E-value=27 Score=23.47 Aligned_cols=106 Identities=15% Similarity=0.146 Sum_probs=61.6
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC------eEEeec--cccceEEEEEccCCCEEEEeCCCCeEEEeeC
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD------KYQLHL--HESCVLSLRFAACGKWFVSTGKDNLLNAWRT 88 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~------~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~ 88 (131)
....+..+.+.+++..++.+ ..+.+.. ....++ ...... ....+..+.|.+++..++++. .|.+..-.
T Consensus 279 ~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~-~G~v~~s~- 354 (398)
T PLN00033 279 SARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAGG-SGILLRST- 354 (398)
T ss_pred CccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEEC-CCcEEEeC-
Confidence 34567788888888887665 4555443 332222 122211 223578899998877766654 55544433
Q ss_pred CCCce-EEe---cCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612 89 PYGAS-IFQ---SKESSSVLSCDISADDKYIVTGSGDKKATVY 127 (131)
Q Consensus 89 ~~~~~-~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 127 (131)
..|+. ... ..-....+.+.|.++++.+++| .+|.|.-|
T Consensus 355 D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il~~ 396 (398)
T PLN00033 355 DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLLRY 396 (398)
T ss_pred CCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEEEe
Confidence 33443 222 2235678899998877777665 45665443
No 495
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=72.03 E-value=37 Score=24.99 Aligned_cols=66 Identities=12% Similarity=-0.069 Sum_probs=46.0
Q ss_pred cceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-Ee-------------------cCCCCCeEEEEECCCCCEEEEec
Q psy15612 60 SCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQ-------------------SKESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~-------------------~~~~~~v~~~~~~~~~~~l~~~~ 119 (131)
..|.++.-..-+..++..-.||.|.++|-.+-+.+ .. .+.-..+..++|||.+..++.-.
T Consensus 260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~ 339 (753)
T PF11635_consen 260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQID 339 (753)
T ss_pred CeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEe
Confidence 44566666666778888899999999986654433 11 01123455688999999888888
Q ss_pred CCCcEE
Q psy15612 120 GDKKAT 125 (131)
Q Consensus 120 ~d~~i~ 125 (131)
.++++.
T Consensus 340 ~~~~~~ 345 (753)
T PF11635_consen 340 EDGKTK 345 (753)
T ss_pred cCCCce
Confidence 888755
No 496
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=71.96 E-value=31 Score=24.13 Aligned_cols=19 Identities=11% Similarity=0.148 Sum_probs=14.7
Q ss_pred cccceEEEEEccCCCEEEE
Q psy15612 58 HESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 58 ~~~~v~~~~~~~~~~~~~~ 76 (131)
...++..+.|+||++.+..
T Consensus 500 ~gaE~tG~~fspDg~tlFv 518 (524)
T PF05787_consen 500 NGAEITGPCFSPDGRTLFV 518 (524)
T ss_pred CCcccccceECCCCCEEEE
Confidence 4567888999999887654
No 497
>KOG1230|consensus
Probab=71.43 E-value=29 Score=23.58 Aligned_cols=118 Identities=12% Similarity=-0.023 Sum_probs=60.3
Q ss_pred CEEEeCCCCceeeeecCCCC----eEEEEECCCCCEEEEEeCCC-----------cEEEEeCCCCCeEEe--ec---ccc
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQ----IFSLGYCPSGEWLAVGMENS-----------NVEVLHALKPDKYQL--HL---HES 60 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~~~-----------~v~~~~~~~~~~~~~--~~---~~~ 60 (131)
++.|++++.+-......+.+ --.+...|++...+.|+... .+.++|+.+.+-.++ .+ ..+
T Consensus 100 Ly~Yn~k~~eWkk~~spn~P~pRsshq~va~~s~~l~~fGGEfaSPnq~qF~HYkD~W~fd~~trkweql~~~g~PS~RS 179 (521)
T KOG1230|consen 100 LYSYNTKKNEWKKVVSPNAPPPRSSHQAVAVPSNILWLFGGEFASPNQEQFHHYKDLWLFDLKTRKWEQLEFGGGPSPRS 179 (521)
T ss_pred eeEEeccccceeEeccCCCcCCCccceeEEeccCeEEEeccccCCcchhhhhhhhheeeeeeccchheeeccCCCCCCCc
Confidence 35667665544333222211 12233345555555554321 255667766654332 22 222
Q ss_pred ceEEEEEccCCCEEEEeCCC---------CeEEEeeCCCCceEEecCC-----CCCeEEEEECCCCCEEEEecC
Q psy15612 61 CVLSLRFAACGKWFVSTGKD---------NLLNAWRTPYGASIFQSKE-----SSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 61 ~v~~~~~~~~~~~~~~~~~~---------~~i~~w~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~ 120 (131)
....++| ..++|+.|+.. +.+++||+.+-+...+... ...=.+++..|++..++-|+.
T Consensus 180 GHRMvaw--K~~lilFGGFhd~nr~y~YyNDvy~FdLdtykW~Klepsga~PtpRSGcq~~vtpqg~i~vyGGY 251 (521)
T KOG1230|consen 180 GHRMVAW--KRQLILFGGFHDSNRDYIYYNDVYAFDLDTYKWSKLEPSGAGPTPRSGCQFSVTPQGGIVVYGGY 251 (521)
T ss_pred cceeEEe--eeeEEEEcceecCCCceEEeeeeEEEeccceeeeeccCCCCCCCCCCcceEEecCCCcEEEEcch
Confidence 3445555 23455555432 3488999998887733321 122356667788887776654
No 498
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=70.54 E-value=24 Score=22.34 Aligned_cols=119 Identities=15% Similarity=0.225 Sum_probs=0.0
Q ss_pred CEEEeCCCCceeeeec--------------------CCCCeEEEEECC---CCCEEEEEeCCCcEEEEeCCCC-------
Q psy15612 1 MYLQSVSPGRQLQQHD--------------------FSSQIFSLGYCP---SGEWLAVGMENSNVEVLHALKP------- 50 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~--------------------~~~~v~~~~~~~---~~~~l~~~~~~~~v~~~~~~~~------- 50 (131)
|.++|+.+++..+.+. ....+..++.+| +++.|......+ -.+|.+.+.
T Consensus 90 lIV~dl~~~~s~Rv~~~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss-~~ly~v~T~~L~~~~~ 168 (287)
T PF03022_consen 90 LIVYDLATGKSWRVLHNSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSS-RKLYRVPTSVLRDPSL 168 (287)
T ss_dssp EEEEETTTTEEEEEETCGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT--SEEEEEEHHHHCSTT-
T ss_pred EEEEEccCCcEEEEecCCcceeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCCC-CcEEEEEHHHhhCccc
Q ss_pred --------CeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCC-----CceE-EecCC-CCCeEEEEECC--CCC
Q psy15612 51 --------DKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY-----GASI-FQSKE-SSSVLSCDISA--DDK 113 (131)
Q Consensus 51 --------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~-----~~~~-~~~~~-~~~v~~~~~~~--~~~ 113 (131)
....+....+....++++++|..+++--..+.|..|+..+ ...+ ..... -..+..+.+.+ +|.
T Consensus 169 ~~~~~~~~~v~~lG~k~~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~ 248 (287)
T PF03022_consen 169 SDAQALASQVQDLGDKGSQSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGY 248 (287)
T ss_dssp -HHH-HHHT-EEEEE---SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-
T ss_pred cccccccccceeccccCCCCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCce
Q ss_pred EEEEecC
Q psy15612 114 YIVTGSG 120 (131)
Q Consensus 114 ~l~~~~~ 120 (131)
+.+....
T Consensus 249 L~v~snr 255 (287)
T PF03022_consen 249 LWVLSNR 255 (287)
T ss_dssp EEEEE-S
T ss_pred EEEEECc
No 499
>PHA02790 Kelch-like protein; Provisional
Probab=69.84 E-value=33 Score=23.55 Aligned_cols=66 Identities=9% Similarity=-0.105 Sum_probs=35.2
Q ss_pred CCCEEEEEeCC--CcEEEEeCCCCCeEEeeccccce-EEEEEccCCCEEEEeCCC---CeEEEeeCCCCceE
Q psy15612 29 SGEWLAVGMEN--SNVEVLHALKPDKYQLHLHESCV-LSLRFAACGKWFVSTGKD---NLLNAWRTPYGASI 94 (131)
Q Consensus 29 ~~~~l~~~~~~--~~v~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~---~~i~~w~~~~~~~~ 94 (131)
++...+.|+.+ ..+..||..+..-..+..-.... ......-+|+..+.|+.+ ..+..||..+.+..
T Consensus 318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~ 389 (480)
T PHA02790 318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQ 389 (480)
T ss_pred CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEE
Confidence 56666666643 35777887665543322211111 111112356666666654 34667888877665
No 500
>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]
Probab=69.36 E-value=34 Score=23.46 Aligned_cols=86 Identities=12% Similarity=0.075 Sum_probs=49.3
Q ss_pred EEEEeCCCCCeEEeec--cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-Ee--cCCCCCeEEEEECC--CCCE
Q psy15612 42 VEVLHALKPDKYQLHL--HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQ--SKESSSVLSCDISA--DDKY 114 (131)
Q Consensus 42 v~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~--~~~~~~v~~~~~~~--~~~~ 114 (131)
+.++|-......++++ ...+|..++|-.|--++++--...-+.+.|+.+.+.. .+ ..-++. +--.+| .+++
T Consensus 408 vYilDe~lnvvGkltGl~~gERIYAvRf~gdv~yiVTfrqtDPlfviDlsNPenPkvlGeLKIPGf--S~YLHpigen~~ 485 (603)
T COG4880 408 VYILDENLNVVGKLTGLAPGERIYAVRFVGDVLYIVTFRQTDPLFVIDLSNPENPKVLGELKIPGF--SEYLHPIGENRL 485 (603)
T ss_pred eEEEcCCCcEEEEEeccCCCceEEEEEEeCceEEEEEEeccCceEEEEcCCCCCCceeEEEecCCc--hhhccccCCCcE
Confidence 5555554444444443 4568999999877777777766666788888776654 11 111221 111234 3455
Q ss_pred EEEecCCCc--EEEEEe
Q psy15612 115 IVTGSGDKK--ATVYEV 129 (131)
Q Consensus 115 l~~~~~d~~--i~vw~~ 129 (131)
+-.|..+|. +.++|+
T Consensus 486 lGvG~~~g~vKiSLFdi 502 (603)
T COG4880 486 LGVGAYQGGVKISLFDI 502 (603)
T ss_pred EEeecccCCceEEEEec
Confidence 666666664 445554
Done!