Query psy15612
Match_columns 131
No_of_seqs 219 out of 1666
Neff 12.2
Searched_HMMs 29240
Date Fri Aug 16 17:09:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15612.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15612hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 2.7E-31 9.1E-36 162.3 19.1 130 1-130 188-320 (321)
2 3ow8_A WD repeat-containing pr 100.0 5E-30 1.7E-34 156.7 19.3 130 1-130 146-278 (321)
3 2ynn_A Coatomer subunit beta'; 100.0 2.5E-30 8.5E-35 156.9 17.7 130 1-130 37-171 (304)
4 1got_B GT-beta; complex (GTP-b 100.0 9.5E-30 3.2E-34 156.4 19.4 128 1-128 208-340 (340)
5 4h5i_A Guanine nucleotide-exch 100.0 4E-30 1.4E-34 159.5 17.6 129 1-130 159-342 (365)
6 1got_B GT-beta; complex (GTP-b 100.0 2.1E-29 7.3E-34 154.8 19.6 130 1-130 166-300 (340)
7 4gqb_B Methylosome protein 50; 100.0 2.1E-29 7.3E-34 155.2 18.5 130 1-130 194-330 (344)
8 1vyh_C Platelet-activating fac 100.0 1.3E-29 4.3E-34 159.2 17.7 130 1-130 132-264 (410)
9 3frx_A Guanine nucleotide-bind 100.0 6.4E-29 2.2E-33 151.6 19.1 130 1-130 89-226 (319)
10 2pbi_B Guanine nucleotide-bind 100.0 6.5E-29 2.2E-33 153.4 19.2 128 1-128 222-354 (354)
11 1vyh_C Platelet-activating fac 100.0 3.3E-29 1.1E-33 157.3 17.7 130 1-130 258-410 (410)
12 4ery_A WD repeat-containing pr 100.0 1.8E-28 6.3E-33 148.8 20.1 130 1-130 47-179 (312)
13 4g56_B MGC81050 protein; prote 100.0 3.7E-29 1.3E-33 154.7 17.1 130 1-130 206-342 (357)
14 4gqb_B Methylosome protein 50; 100.0 6.3E-29 2.2E-33 153.1 17.6 130 1-130 105-245 (344)
15 3iz6_a 40S ribosomal protein R 100.0 1E-28 3.5E-33 153.7 17.3 130 1-130 230-374 (380)
16 1erj_A Transcriptional repress 100.0 4.2E-28 1.4E-32 151.5 19.9 130 1-130 147-286 (393)
17 1gxr_A ESG1, transducin-like e 100.0 9.3E-28 3.2E-32 146.4 20.4 131 1-131 207-337 (337)
18 1nr0_A Actin interacting prote 100.0 4.1E-28 1.4E-32 158.7 19.6 130 1-130 172-354 (611)
19 2ynn_A Coatomer subunit beta'; 100.0 2.9E-28 9.9E-33 147.8 17.4 119 12-130 6-127 (304)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 5E-28 1.7E-32 149.0 18.6 130 1-130 85-224 (345)
21 2xzm_R RACK1; ribosome, transl 100.0 6.5E-28 2.2E-32 148.3 19.1 128 1-129 100-242 (343)
22 2hes_X YDR267CP; beta-propelle 100.0 8.9E-28 3E-32 147.1 19.3 130 1-130 36-183 (330)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 6E-28 2.1E-32 148.6 18.4 130 1-130 40-180 (345)
24 4ery_A WD repeat-containing pr 100.0 1.4E-27 4.8E-32 144.9 19.7 130 1-130 89-222 (312)
25 2ymu_A WD-40 repeat protein; u 100.0 4.8E-28 1.6E-32 156.9 18.2 126 1-128 450-577 (577)
26 2pbi_B Guanine nucleotide-bind 100.0 1.6E-27 5.5E-32 147.2 19.4 130 1-130 178-314 (354)
27 2hes_X YDR267CP; beta-propelle 100.0 2.3E-27 7.8E-32 145.3 19.3 130 1-130 82-229 (330)
28 4aow_A Guanine nucleotide-bind 100.0 1.4E-26 4.8E-31 141.5 20.3 129 1-130 197-336 (340)
29 1erj_A Transcriptional repress 100.0 6.1E-27 2.1E-31 146.3 18.8 130 1-130 87-237 (393)
30 3iz6_a 40S ribosomal protein R 100.0 9.7E-27 3.3E-31 144.9 18.5 129 1-129 182-327 (380)
31 2pm7_B Protein transport prote 100.0 1.3E-26 4.4E-31 140.2 18.3 130 1-130 79-237 (297)
32 3dwl_C Actin-related protein 2 100.0 1.1E-27 3.7E-32 148.5 13.9 129 1-129 35-175 (377)
33 2pm7_B Protein transport prote 100.0 2E-26 6.8E-31 139.3 18.9 130 1-130 33-188 (297)
34 3vu4_A KMHSV2; beta-propeller 100.0 6.9E-27 2.4E-31 144.5 17.1 130 1-130 83-270 (355)
35 2aq5_A Coronin-1A; WD40 repeat 100.0 9.8E-27 3.4E-31 145.5 17.7 130 1-130 59-206 (402)
36 3dm0_A Maltose-binding peripla 100.0 8E-27 2.7E-31 154.4 18.1 130 1-130 454-591 (694)
37 2xzm_R RACK1; ribosome, transl 100.0 2.8E-26 9.7E-31 141.0 19.2 129 1-129 51-201 (343)
38 3frx_A Guanine nucleotide-bind 100.0 1.2E-26 4.2E-31 141.5 17.4 130 1-130 42-184 (319)
39 3vl1_A 26S proteasome regulato 100.0 4.2E-27 1.4E-31 147.5 15.1 130 1-130 121-277 (420)
40 1nr0_A Actin interacting prote 100.0 2.1E-26 7.3E-31 150.7 18.7 127 2-130 132-269 (611)
41 1sq9_A Antiviral protein SKI8; 100.0 3.4E-26 1.2E-30 142.4 18.8 130 1-130 209-394 (397)
42 4g56_B MGC81050 protein; prote 100.0 8.6E-27 2.9E-31 144.2 15.8 130 1-130 117-257 (357)
43 3lrv_A PRE-mRNA-splicing facto 100.0 3.6E-26 1.2E-30 140.6 18.4 127 3-130 108-243 (343)
44 1gxr_A ESG1, transducin-like e 100.0 7.2E-26 2.5E-30 138.0 19.3 130 1-130 165-295 (337)
45 3k26_A Polycomb protein EED; W 100.0 2.6E-26 8.7E-31 141.3 17.5 130 1-130 46-191 (366)
46 2ymu_A WD-40 repeat protein; u 100.0 3.5E-26 1.2E-30 148.2 18.6 127 1-129 409-537 (577)
47 3f3f_A Nucleoporin SEH1; struc 100.0 4.9E-26 1.7E-30 138.9 17.4 130 1-130 83-336 (351)
48 3dwl_C Actin-related protein 2 99.9 5.6E-27 1.9E-31 145.3 12.7 130 1-130 79-235 (377)
49 4e54_B DNA damage-binding prot 99.9 7.4E-27 2.5E-31 147.5 13.2 130 1-130 189-326 (435)
50 4e54_B DNA damage-binding prot 99.9 1.9E-26 6.4E-31 145.7 14.9 130 1-130 144-281 (435)
51 2w18_A PALB2, fancn, partner a 99.9 3.6E-26 1.2E-30 139.3 15.4 128 1-130 205-356 (356)
52 3ei3_B DNA damage-binding prot 99.9 9.8E-26 3.4E-30 140.1 17.7 130 1-130 143-281 (383)
53 3zwl_B Eukaryotic translation 99.9 6.2E-25 2.1E-29 135.2 20.6 130 1-130 199-345 (369)
54 3vl1_A 26S proteasome regulato 99.9 3.6E-26 1.2E-30 143.3 15.3 130 1-130 80-211 (420)
55 2aq5_A Coronin-1A; WD40 repeat 99.9 6.9E-26 2.3E-30 141.7 16.4 130 1-130 106-253 (402)
56 3ei3_B DNA damage-binding prot 99.9 1.4E-25 4.8E-30 139.4 17.3 129 1-130 98-235 (383)
57 3f3f_A Nucleoporin SEH1; struc 99.9 4.5E-25 1.5E-29 134.6 19.1 130 1-130 35-248 (351)
58 2j04_B YDR362CP, TAU91; beta p 99.9 5.1E-27 1.7E-31 151.2 10.8 129 1-129 289-426 (524)
59 1pgu_A Actin interacting prote 99.9 8.2E-26 2.8E-30 147.0 16.2 129 1-130 469-613 (615)
60 3sfz_A APAF-1, apoptotic pepti 99.9 3.9E-25 1.3E-29 153.3 20.0 130 1-130 639-773 (1249)
61 1k8k_C P40, ARP2/3 complex 41 99.9 1.8E-25 6.2E-30 138.0 16.5 129 1-129 32-171 (372)
62 3vu4_A KMHSV2; beta-propeller 99.9 6.4E-25 2.2E-29 135.7 18.9 130 1-130 161-335 (355)
63 3lrv_A PRE-mRNA-splicing facto 99.9 1.4E-25 4.7E-30 138.0 15.7 128 1-129 151-290 (343)
64 4aez_A CDC20, WD repeat-contai 99.9 7.6E-25 2.6E-29 137.1 19.2 128 1-130 115-247 (401)
65 3dm0_A Maltose-binding peripla 99.9 2.9E-25 9.9E-30 147.0 17.9 130 1-130 407-549 (694)
66 2oaj_A Protein SNI1; WD40 repe 99.9 9.9E-26 3.4E-30 152.7 15.9 128 1-129 459-659 (902)
67 3i2n_A WD repeat-containing pr 99.9 1.1E-25 3.8E-30 138.2 14.8 130 1-130 192-352 (357)
68 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2.3E-25 7.8E-30 141.2 16.2 129 1-130 127-270 (450)
69 1r5m_A SIR4-interacting protei 99.9 6.9E-25 2.4E-29 137.1 18.1 129 1-130 229-360 (425)
70 3mkq_A Coatomer beta'-subunit; 99.9 1.7E-25 6E-30 149.6 16.2 130 1-130 37-171 (814)
71 3jrp_A Fusion protein of prote 99.9 4.7E-25 1.6E-29 136.3 16.9 130 1-130 35-190 (379)
72 2j04_B YDR362CP, TAU91; beta p 99.9 2.7E-25 9.2E-30 143.3 15.9 129 1-130 185-341 (524)
73 2oaj_A Protein SNI1; WD40 repe 99.9 2.1E-25 7.2E-30 151.2 15.9 129 1-130 81-241 (902)
74 3mmy_A MRNA export factor; mRN 99.9 6.8E-25 2.3E-29 135.0 16.7 124 7-130 27-159 (368)
75 4a11_B DNA excision repair pro 99.9 2.5E-24 8.4E-29 134.1 19.4 130 1-130 168-364 (408)
76 3jrp_A Fusion protein of prote 99.9 1.2E-24 4.2E-29 134.4 17.7 130 1-130 81-239 (379)
77 3bg1_A Protein SEC13 homolog; 99.9 6.3E-26 2.1E-30 138.2 11.7 130 1-130 83-246 (316)
78 2pm9_A Protein WEB1, protein t 99.9 4.7E-25 1.6E-29 137.9 15.5 130 1-130 190-336 (416)
79 3bg1_A Protein SEC13 homolog; 99.9 3.4E-25 1.2E-29 135.0 14.5 115 16-130 11-135 (316)
80 1r5m_A SIR4-interacting protei 99.9 4E-25 1.4E-29 138.2 15.1 129 1-130 271-424 (425)
81 3mmy_A MRNA export factor; mRN 99.9 1.4E-24 4.7E-29 133.6 17.3 92 1-92 66-162 (368)
82 3k26_A Polycomb protein EED; W 99.9 4.3E-25 1.5E-29 135.9 15.0 128 1-130 97-259 (366)
83 2pm9_A Protein WEB1, protein t 99.9 2.7E-25 9.2E-30 139.0 14.2 130 1-130 47-196 (416)
84 4aez_A CDC20, WD repeat-contai 99.9 1.5E-24 5.2E-29 135.7 17.3 130 1-130 241-379 (401)
85 1k8k_C P40, ARP2/3 complex 41 99.9 2.3E-24 7.8E-29 133.1 17.8 130 1-130 76-232 (372)
86 2j04_A TAU60, YPL007P, hypothe 99.9 2.6E-25 8.9E-30 142.9 12.6 124 3-130 68-210 (588)
87 4gga_A P55CDC, cell division c 99.9 9.6E-24 3.3E-28 132.8 19.4 128 1-130 127-260 (420)
88 4gga_A P55CDC, cell division c 99.9 2.6E-24 9E-29 135.4 16.7 130 1-130 254-394 (420)
89 1sq9_A Antiviral protein SKI8; 99.9 6.6E-25 2.3E-29 136.6 13.4 129 1-130 150-321 (397)
90 2xyi_A Probable histone-bindin 99.9 7.4E-24 2.5E-28 133.7 18.2 130 1-130 256-409 (430)
91 4ggc_A P55CDC, cell division c 99.9 3.5E-24 1.2E-28 129.9 16.1 130 1-130 174-314 (318)
92 3gre_A Serine/threonine-protei 99.9 4.5E-25 1.5E-29 139.1 12.5 129 1-130 194-358 (437)
93 3zwl_B Eukaryotic translation 99.9 2E-23 7E-28 128.4 19.5 115 16-130 30-150 (369)
94 4gq1_A NUP37; propeller, trans 99.9 9.2E-25 3.1E-29 136.6 13.6 130 1-130 113-285 (393)
95 4ggc_A P55CDC, cell division c 99.9 3.2E-23 1.1E-27 125.6 19.4 128 1-130 47-180 (318)
96 3odt_A Protein DOA1; ubiquitin 99.9 6.8E-24 2.3E-28 128.2 16.5 125 1-130 167-295 (313)
97 3dw8_B Serine/threonine-protei 99.9 1.8E-24 6.2E-29 136.4 14.5 129 1-130 52-257 (447)
98 3i2n_A WD repeat-containing pr 99.9 7.7E-24 2.6E-28 130.0 16.9 130 1-130 92-242 (357)
99 3mkq_A Coatomer beta'-subunit; 99.9 6.5E-24 2.2E-28 142.1 17.2 118 13-130 7-127 (814)
100 3dw8_B Serine/threonine-protei 99.9 3E-24 1E-28 135.4 14.5 129 1-130 200-372 (447)
101 3v7d_B Cell division control p 99.9 1.1E-23 3.9E-28 133.6 16.9 127 1-130 292-420 (464)
102 3v7d_B Cell division control p 99.9 2E-23 6.7E-28 132.5 17.5 128 1-130 185-340 (464)
103 4a11_B DNA excision repair pro 99.9 4.5E-23 1.5E-27 128.4 18.8 130 1-130 124-275 (408)
104 3gre_A Serine/threonine-protei 99.9 7E-24 2.4E-28 133.7 15.3 130 1-130 88-244 (437)
105 3jro_A Fusion protein of prote 99.9 7.4E-24 2.5E-28 141.5 16.1 130 1-130 33-188 (753)
106 4aow_A Guanine nucleotide-bind 99.9 2.3E-23 7.7E-28 127.3 17.0 120 10-129 29-157 (340)
107 2xyi_A Probable histone-bindin 99.9 3.4E-23 1.2E-27 130.7 18.2 130 1-130 206-352 (430)
108 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.1E-23 3.7E-28 133.6 15.6 111 20-130 104-228 (450)
109 1yfq_A Cell cycle arrest prote 99.9 4.3E-24 1.5E-28 130.6 12.7 127 1-130 35-178 (342)
110 3jro_A Fusion protein of prote 99.9 1.9E-23 6.5E-28 139.5 16.6 130 1-130 79-237 (753)
111 1pgu_A Actin interacting prote 99.9 5.3E-23 1.8E-27 133.9 17.2 128 1-130 429-571 (615)
112 4h5i_A Guanine nucleotide-exch 99.9 9.5E-23 3.3E-27 126.5 17.2 113 17-130 132-299 (365)
113 1yfq_A Cell cycle arrest prote 99.9 3.5E-23 1.2E-27 126.6 14.8 114 16-130 9-130 (342)
114 3sfz_A APAF-1, apoptotic pepti 99.9 1.5E-22 5.3E-27 140.4 18.6 129 1-129 725-911 (1249)
115 1l0q_A Surface layer protein; 99.9 3.9E-22 1.3E-26 124.1 18.5 130 1-130 14-146 (391)
116 2j04_A TAU60, YPL007P, hypothe 99.9 4.8E-23 1.6E-27 132.5 14.4 123 1-130 109-253 (588)
117 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.5E-22 2.9E-26 124.0 19.4 129 1-129 161-298 (415)
118 2oit_A Nucleoporin 214KDA; NH2 99.9 7.5E-24 2.6E-28 134.0 9.9 115 16-130 90-222 (434)
119 3odt_A Protein DOA1; ubiquitin 99.9 1.8E-22 6.2E-27 122.0 15.3 125 1-130 126-254 (313)
120 1l0q_A Surface layer protein; 99.9 1.9E-21 6.5E-26 121.0 19.3 130 1-130 56-188 (391)
121 1p22_A F-BOX/WD-repeat protein 99.9 9.3E-22 3.2E-26 124.2 17.0 124 1-130 155-284 (435)
122 1p22_A F-BOX/WD-repeat protein 99.9 1.4E-21 4.8E-26 123.4 17.3 124 1-130 235-364 (435)
123 2w18_A PALB2, fancn, partner a 99.9 7.4E-22 2.5E-26 120.5 15.3 128 1-130 159-313 (356)
124 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.9E-21 6.6E-26 123.0 17.8 124 1-130 141-267 (445)
125 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.8E-21 1.6E-25 120.6 17.7 129 1-129 205-342 (415)
126 2ovr_B FBW7, F-BOX/WD repeat p 99.9 4.1E-21 1.4E-25 121.5 17.5 124 1-130 181-307 (445)
127 3bws_A Protein LP49; two-domai 99.9 8.3E-21 2.9E-25 119.5 18.2 130 1-130 285-431 (433)
128 4gq1_A NUP37; propeller, trans 99.9 1.2E-22 4.1E-27 127.0 9.7 105 26-130 97-217 (393)
129 3bws_A Protein LP49; two-domai 99.9 5.3E-21 1.8E-25 120.4 16.2 130 1-130 146-291 (433)
130 2oit_A Nucleoporin 214KDA; NH2 99.9 8.2E-21 2.8E-25 120.2 13.0 129 1-130 120-277 (434)
131 2ojh_A Uncharacterized protein 99.8 7E-19 2.4E-23 105.3 16.5 128 1-130 24-159 (297)
132 3o4h_A Acylamino-acid-releasin 99.8 8.7E-20 3E-24 118.9 9.7 126 2-129 135-274 (582)
133 3u4y_A Uncharacterized protein 99.8 2.4E-17 8.2E-22 100.6 18.1 128 1-129 22-158 (331)
134 2z3z_A Dipeptidyl aminopeptida 99.8 9.1E-19 3.1E-23 116.2 12.1 128 1-129 103-291 (706)
135 2ecf_A Dipeptidyl peptidase IV 99.8 1.2E-18 4.2E-23 116.0 12.7 120 1-122 66-230 (741)
136 1k32_A Tricorn protease; prote 99.8 7E-18 2.4E-22 116.2 16.2 126 3-128 363-499 (1045)
137 1xfd_A DIP, dipeptidyl aminope 99.8 1.2E-18 4.2E-23 115.7 11.2 120 1-121 39-193 (723)
138 1nir_A Nitrite reductase; hemo 99.8 5.5E-17 1.9E-21 105.3 18.4 129 1-129 161-309 (543)
139 1pby_B Quinohemoprotein amine 99.8 8.5E-18 2.9E-22 102.4 13.6 128 1-130 13-162 (337)
140 1ri6_A Putative isomerase YBHE 99.8 5.6E-18 1.9E-22 103.5 12.4 129 1-130 17-159 (343)
141 2ojh_A Uncharacterized protein 99.8 7E-17 2.4E-21 96.6 16.4 129 1-130 64-203 (297)
142 1pby_B Quinohemoprotein amine 99.8 4.2E-17 1.4E-21 99.4 15.5 126 1-130 117-309 (337)
143 1z68_A Fibroblast activation p 99.8 1.4E-18 4.7E-23 115.5 9.4 117 1-121 38-189 (719)
144 3u4y_A Uncharacterized protein 99.8 1.2E-16 4.2E-21 97.4 16.1 129 1-129 110-250 (331)
145 1k32_A Tricorn protease; prote 99.8 1.8E-17 6.3E-22 114.1 13.8 128 1-129 319-459 (1045)
146 3vgz_A Uncharacterized protein 99.8 7.2E-17 2.5E-21 99.0 14.6 130 1-130 71-214 (353)
147 1ri6_A Putative isomerase YBHE 99.8 8.7E-17 3E-21 98.2 14.1 129 1-129 62-207 (343)
148 3vgz_A Uncharacterized protein 99.8 5.3E-16 1.8E-20 95.2 17.2 129 1-129 113-260 (353)
149 3hfq_A Uncharacterized protein 99.7 1.3E-15 4.4E-20 93.6 17.0 130 1-130 65-217 (347)
150 2z3z_A Dipeptidyl aminopeptida 99.7 1.5E-16 5E-21 105.7 13.1 130 1-130 143-341 (706)
151 2ecf_A Dipeptidyl peptidase IV 99.7 3.1E-16 1E-20 104.6 14.1 110 18-129 36-179 (741)
152 3scy_A Hypothetical bacterial 99.7 1.8E-15 6.3E-20 93.4 16.5 114 16-129 208-335 (361)
153 4a5s_A Dipeptidyl peptidase 4 99.7 1.1E-16 3.6E-21 107.1 11.8 128 1-129 38-200 (740)
154 1nir_A Nitrite reductase; hemo 99.7 1.2E-15 4.2E-20 99.1 15.7 130 1-130 202-354 (543)
155 1jmx_B Amine dehydrogenase; ox 99.7 5.8E-16 2E-20 94.8 13.5 125 1-130 127-324 (349)
156 1jmx_B Amine dehydrogenase; ox 99.7 2.3E-16 7.9E-21 96.6 11.4 126 1-129 23-173 (349)
157 3hfq_A Uncharacterized protein 99.7 8.1E-16 2.8E-20 94.5 13.5 127 3-130 22-170 (347)
158 1xfd_A DIP, dipeptidyl aminope 99.7 1.9E-16 6.3E-21 105.3 11.1 128 1-129 93-287 (723)
159 3o4h_A Acylamino-acid-releasin 99.7 1.4E-15 4.9E-20 99.2 12.9 108 20-129 111-225 (582)
160 3azo_A Aminopeptidase; POP fam 99.7 1.3E-15 4.3E-20 100.6 12.6 112 17-128 128-269 (662)
161 3scy_A Hypothetical bacterial 99.7 2.5E-14 8.7E-19 88.3 17.3 111 20-130 156-290 (361)
162 4a5s_A Dipeptidyl peptidase 4 99.7 3.2E-15 1.1E-19 100.1 13.0 128 2-130 95-293 (740)
163 1jof_A Carboxy-CIS,CIS-muconat 99.6 6.9E-15 2.3E-19 91.2 12.2 129 1-129 62-222 (365)
164 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.6E-13 5.6E-18 85.1 17.9 130 1-130 121-290 (365)
165 1z68_A Fibroblast activation p 99.6 2.4E-15 8.2E-20 100.1 8.8 106 22-129 19-137 (719)
166 2gop_A Trilobed protease; beta 99.6 8.1E-14 2.8E-18 85.5 14.6 113 1-121 45-190 (347)
167 3azo_A Aminopeptidase; POP fam 99.6 4.1E-14 1.4E-18 93.5 13.6 128 1-129 163-321 (662)
168 1q7f_A NHL, brain tumor CG1071 99.6 1.1E-12 3.8E-17 78.6 17.3 127 1-130 144-279 (286)
169 1q7f_A NHL, brain tumor CG1071 99.6 2.2E-12 7.7E-17 77.3 17.6 127 1-129 102-236 (286)
170 3fvz_A Peptidyl-glycine alpha- 99.6 2.4E-12 8.2E-17 78.9 17.2 128 1-129 71-225 (329)
171 3pe7_A Oligogalacturonate lyas 99.6 4.7E-13 1.6E-17 83.2 14.2 129 1-129 62-223 (388)
172 2xdw_A Prolyl endopeptidase; a 99.5 4.1E-13 1.4E-17 89.6 14.4 110 20-129 126-266 (710)
173 1qks_A Cytochrome CD1 nitrite 99.5 2.8E-12 9.5E-17 83.8 17.8 93 1-94 179-279 (567)
174 3c5m_A Oligogalacturonate lyas 99.5 4.4E-13 1.5E-17 83.4 13.1 127 1-129 170-327 (396)
175 2dg1_A DRP35, lactonase; beta 99.5 1.1E-11 3.9E-16 75.7 17.8 129 1-129 68-211 (333)
176 2oiz_A Aromatic amine dehydrog 99.5 2E-12 7E-17 80.2 14.3 127 1-129 33-180 (361)
177 3pe7_A Oligogalacturonate lyas 99.5 1.7E-12 5.9E-17 80.7 14.0 114 4-117 15-141 (388)
178 3c5m_A Oligogalacturonate lyas 99.5 3E-12 1E-16 79.6 14.3 127 1-129 218-380 (396)
179 3e5z_A Putative gluconolactona 99.5 2.5E-11 8.5E-16 73.2 17.9 126 1-129 52-200 (296)
180 2bkl_A Prolyl endopeptidase; m 99.5 5.4E-13 1.8E-17 88.9 11.4 104 19-122 121-248 (695)
181 3fvz_A Peptidyl-glycine alpha- 99.5 5.5E-12 1.9E-16 77.3 14.7 128 1-130 168-321 (329)
182 3dsm_A Uncharacterized protein 99.5 4.8E-12 1.7E-16 77.6 13.6 127 1-129 154-300 (328)
183 1xip_A Nucleoporin NUP159; bet 99.5 6.8E-12 2.3E-16 78.4 14.1 104 16-130 86-190 (388)
184 2xdw_A Prolyl endopeptidase; a 99.5 5.4E-12 1.8E-16 84.3 14.0 128 1-129 153-318 (710)
185 3dsm_A Uncharacterized protein 99.5 1.3E-11 4.5E-16 75.7 14.7 128 1-129 66-210 (328)
186 2gop_A Trilobed protease; beta 99.4 5.2E-12 1.8E-16 77.5 11.8 112 1-121 87-235 (347)
187 2dg1_A DRP35, lactonase; beta 99.4 1.4E-10 4.7E-15 70.9 17.6 105 16-120 42-154 (333)
188 1yr2_A Prolyl oligopeptidase; 99.4 2.3E-11 7.9E-16 81.7 14.7 110 20-130 164-302 (741)
189 1rwi_B Serine/threonine-protei 99.4 6.4E-11 2.2E-15 70.3 14.6 112 19-130 150-263 (270)
190 1xip_A Nucleoporin NUP159; bet 99.4 3.2E-11 1.1E-15 75.4 13.7 110 1-117 108-230 (388)
191 3no2_A Uncharacterized protein 99.4 5.4E-11 1.8E-15 71.4 14.0 125 1-129 17-153 (276)
192 3no2_A Uncharacterized protein 99.4 1.3E-10 4.3E-15 69.8 14.5 127 1-129 58-193 (276)
193 2bkl_A Prolyl endopeptidase; m 99.4 2.3E-11 8E-16 81.1 12.4 128 1-129 149-302 (695)
194 2mad_H Methylamine dehydrogena 99.4 3.4E-10 1.1E-14 70.7 16.7 124 1-129 49-194 (373)
195 1rwi_B Serine/threonine-protei 99.3 5.4E-10 1.8E-14 66.3 15.1 129 1-129 89-220 (270)
196 3sjl_D Methylamine dehydrogena 99.3 1.4E-10 4.6E-15 72.5 12.7 93 1-94 61-173 (386)
197 3e5z_A Putative gluconolactona 99.3 7.6E-10 2.6E-14 66.7 15.7 116 3-122 155-278 (296)
198 1qks_A Cytochrome CD1 nitrite 99.3 2.1E-10 7.1E-15 75.1 13.8 102 28-129 165-273 (567)
199 2oiz_A Aromatic amine dehydrog 99.3 1.7E-10 5.9E-15 71.6 12.3 87 24-113 259-360 (361)
200 1yr2_A Prolyl oligopeptidase; 99.3 2E-10 7E-15 77.2 12.8 127 1-129 191-348 (741)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1.8E-09 6.2E-14 65.3 15.0 121 9-129 162-297 (314)
202 3g4e_A Regucalcin; six bladed 99.2 6.3E-09 2.2E-13 62.9 16.9 125 1-129 37-178 (297)
203 2z2n_A Virginiamycin B lyase; 99.2 2E-08 6.9E-13 60.2 18.6 125 2-129 123-253 (299)
204 2mad_H Methylamine dehydrogena 99.2 1.2E-08 4E-13 63.8 17.6 66 65-130 272-349 (373)
205 3dr2_A Exported gluconolactona 99.2 6.9E-09 2.4E-13 62.9 15.9 126 2-130 70-223 (305)
206 2z2n_A Virginiamycin B lyase; 99.2 3E-08 1E-12 59.4 18.4 125 2-129 39-169 (299)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 9.1E-09 3.1E-13 62.2 15.8 126 1-129 48-205 (314)
208 2ghs_A AGR_C_1268P; regucalcin 99.1 2.2E-08 7.5E-13 61.4 16.7 124 1-129 73-208 (326)
209 3hrp_A Uncharacterized protein 99.1 5.5E-09 1.9E-13 66.0 14.1 128 1-129 154-296 (409)
210 3c75_H MADH, methylamine dehyd 99.1 1.4E-09 4.8E-14 68.9 11.2 122 1-123 101-250 (426)
211 3hrp_A Uncharacterized protein 99.1 3.5E-08 1.2E-12 62.4 17.3 128 1-129 242-408 (409)
212 1fwx_A Nitrous oxide reductase 99.1 7.7E-09 2.6E-13 67.7 14.0 127 2-129 178-359 (595)
213 3sjl_D Methylamine dehydrogena 99.1 1.4E-09 4.7E-14 68.1 9.5 105 24-130 38-168 (386)
214 2qc5_A Streptogramin B lactona 99.1 1.9E-07 6.5E-12 55.9 18.4 124 2-128 44-173 (300)
215 2ghs_A AGR_C_1268P; regucalcin 99.1 1.5E-07 5E-12 57.7 17.6 127 1-129 111-258 (326)
216 3iuj_A Prolyl endopeptidase; h 99.1 3E-09 1E-13 71.2 10.6 110 19-129 129-266 (693)
217 2qc5_A Streptogramin B lactona 99.0 2.6E-07 9E-12 55.3 18.5 125 2-129 86-216 (300)
218 3g4e_A Regucalcin; six bladed 99.0 6.2E-08 2.1E-12 58.6 14.8 103 16-118 146-259 (297)
219 3dr2_A Exported gluconolactona 99.0 2.3E-08 8E-13 60.6 12.5 116 3-122 173-298 (305)
220 2iwa_A Glutamine cyclotransfer 99.0 9.6E-08 3.3E-12 57.0 14.4 127 1-130 88-236 (266)
221 3iuj_A Prolyl endopeptidase; h 98.9 4.1E-08 1.4E-12 65.8 12.8 127 1-129 157-312 (693)
222 2ece_A 462AA long hypothetical 98.9 1.1E-07 3.8E-12 60.5 13.2 129 1-129 166-350 (462)
223 2qe8_A Uncharacterized protein 98.9 9.3E-08 3.2E-12 59.0 11.7 101 20-120 196-310 (343)
224 2qe8_A Uncharacterized protein 98.9 9.3E-08 3.2E-12 59.0 11.5 129 1-129 95-276 (343)
225 1fwx_A Nitrous oxide reductase 98.9 1.8E-07 6.3E-12 61.4 13.1 129 1-130 114-307 (595)
226 3tc9_A Hypothetical hydrolase; 98.8 3.5E-06 1.2E-10 53.7 18.0 128 1-129 161-299 (430)
227 1mda_H Methylamine dehydrogena 98.8 2E-08 6.9E-13 62.6 7.5 88 2-90 49-158 (368)
228 2hz6_A Endoplasmic reticulum t 98.8 8.2E-11 2.8E-15 73.3 -3.6 124 1-129 21-147 (369)
229 2ece_A 462AA long hypothetical 98.8 1.2E-06 3.9E-11 56.0 14.9 127 1-128 108-286 (462)
230 3c75_H MADH, methylamine dehyd 98.8 6.8E-08 2.3E-12 61.3 9.3 100 28-129 82-207 (426)
231 3nol_A Glutamine cyclotransfer 98.8 6.1E-07 2.1E-11 53.3 12.7 117 1-120 109-244 (262)
232 2iwa_A Glutamine cyclotransfer 98.8 5.5E-07 1.9E-11 53.8 12.5 124 1-129 46-179 (266)
233 3nok_A Glutaminyl cyclase; bet 98.8 1.2E-06 4.2E-11 52.1 13.7 116 1-119 118-253 (268)
234 3nol_A Glutamine cyclotransfer 98.7 1.7E-06 5.7E-11 51.5 12.1 125 1-129 67-199 (262)
235 3mbr_X Glutamine cyclotransfer 98.7 7.4E-06 2.5E-10 48.3 15.5 117 1-120 87-223 (243)
236 1kb0_A Quinohemoprotein alcoho 98.6 5.9E-07 2E-11 60.3 10.7 130 1-130 285-506 (677)
237 1mda_H Methylamine dehydrogena 98.6 1.3E-07 4.3E-12 59.1 6.9 87 41-129 47-156 (368)
238 2xe4_A Oligopeptidase B; hydro 98.6 1.2E-06 4E-11 59.5 12.0 107 20-129 175-302 (751)
239 3nok_A Glutaminyl cyclase; bet 98.6 2.9E-06 9.8E-11 50.6 11.1 124 1-129 77-208 (268)
240 1npe_A Nidogen, entactin; glyc 98.6 1.9E-05 6.5E-10 46.9 17.8 128 2-129 61-196 (267)
241 1yiq_A Quinohemoprotein alcoho 98.5 3.9E-06 1.3E-10 56.5 12.4 129 1-129 277-503 (689)
242 3mbr_X Glutamine cyclotransfer 98.5 1.6E-05 5.3E-10 46.9 13.5 126 1-129 45-177 (243)
243 1kb0_A Quinohemoprotein alcoho 98.5 7.5E-06 2.6E-10 55.1 13.5 77 40-116 457-535 (677)
244 4hw6_A Hypothetical protein, I 98.5 3.7E-05 1.3E-09 49.1 15.8 128 1-129 164-302 (433)
245 2p4o_A Hypothetical protein; p 98.4 4.8E-05 1.6E-09 46.2 17.8 120 9-129 22-145 (306)
246 2xe4_A Oligopeptidase B; hydro 98.4 1.3E-05 4.4E-10 54.5 12.1 120 1-121 203-340 (751)
247 1yiq_A Quinohemoprotein alcoho 98.4 1.1E-05 3.7E-10 54.4 11.7 77 40-116 455-533 (689)
248 2fp8_A Strictosidine synthase; 98.4 7.7E-05 2.6E-09 45.5 15.1 109 20-129 81-214 (322)
249 2fp8_A Strictosidine synthase; 98.4 8.2E-05 2.8E-09 45.4 14.1 125 3-130 169-312 (322)
250 2hz6_A Endoplasmic reticulum t 98.2 1.3E-07 4.4E-12 59.0 -0.1 98 29-129 8-109 (369)
251 3q7m_A Lipoprotein YFGL, BAMB; 98.2 4.3E-05 1.5E-09 47.5 11.3 120 2-128 252-375 (376)
252 3kya_A Putative phosphatase; s 98.2 0.00031 1.1E-08 45.7 16.3 128 1-129 164-339 (496)
253 1kv9_A Type II quinohemoprotei 98.2 5.7E-05 1.9E-09 50.8 11.8 129 2-130 273-487 (668)
254 3hxj_A Pyrrolo-quinoline quino 98.2 9.9E-05 3.4E-09 44.8 11.9 123 2-129 198-322 (330)
255 2ad6_A Methanol dehydrogenase 98.2 7.9E-05 2.7E-09 49.3 12.1 128 2-129 275-492 (571)
256 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.00014 4.9E-09 45.2 12.8 124 1-129 65-205 (376)
257 1npe_A Nidogen, entactin; glyc 98.2 0.00023 7.9E-09 42.2 17.8 110 19-129 122-236 (267)
258 3hxj_A Pyrrolo-quinoline quino 98.1 0.00011 3.7E-09 44.6 11.0 119 2-128 120-241 (330)
259 3tc9_A Hypothetical hydrolase; 98.1 7.9E-05 2.7E-09 47.6 10.2 109 20-129 138-255 (430)
260 2ad6_A Methanol dehydrogenase 98.1 7.7E-05 2.6E-09 49.3 10.0 78 39-116 443-522 (571)
261 1ijq_A LDL receptor, low-densi 98.0 0.00056 1.9E-08 41.8 17.9 128 1-128 12-149 (316)
262 1k3i_A Galactose oxidase precu 98.0 0.00045 1.5E-08 46.4 12.8 107 23-129 190-321 (656)
263 1flg_A Protein (quinoprotein e 97.9 0.00027 9.4E-09 46.9 10.7 50 80-129 465-514 (582)
264 2p9w_A MAL S 1 allergenic prot 97.9 0.0012 4.3E-08 40.7 16.2 111 20-130 64-214 (334)
265 3v64_C Agrin; beta propeller, 97.9 0.0013 4.5E-08 40.8 16.3 110 20-129 117-232 (349)
266 1flg_A Protein (quinoprotein e 97.9 0.00028 9.7E-09 46.8 9.9 77 39-115 465-543 (582)
267 3qqz_A Putative uncharacterize 97.8 0.0012 4.1E-08 39.3 15.0 113 16-129 24-149 (255)
268 3v64_C Agrin; beta propeller, 97.8 0.0016 5.5E-08 40.4 17.7 125 4-128 58-188 (349)
269 3amr_A 3-phytase; beta-propell 97.8 0.002 6.8E-08 40.2 13.8 125 1-129 52-206 (355)
270 3pbp_A Nucleoporin NUP82; beta 97.8 0.0017 5.8E-08 41.6 11.8 105 20-125 67-206 (452)
271 3v65_B Low-density lipoprotein 97.8 0.0024 8.1E-08 40.2 16.4 126 3-128 100-231 (386)
272 1ijq_A LDL receptor, low-densi 97.7 0.0021 7.1E-08 39.3 16.8 111 19-129 77-193 (316)
273 3p5b_L Low density lipoprotein 97.7 0.0026 8.8E-08 40.3 17.5 127 2-128 95-231 (400)
274 1w6s_A Methanol dehydrogenase 97.7 0.0019 6.4E-08 43.2 12.1 51 2-52 281-345 (599)
275 1k3i_A Galactose oxidase precu 97.7 0.0023 8E-08 43.0 12.2 99 22-120 402-530 (656)
276 3sov_A LRP-6, low-density lipo 97.6 0.0036 1.2E-07 38.4 15.2 110 20-129 80-195 (318)
277 1tl2_A L10, protein (tachylect 97.6 0.00072 2.5E-08 39.5 7.5 99 20-124 42-156 (236)
278 3v65_B Low-density lipoprotein 97.5 0.0057 2E-07 38.5 17.3 109 19-128 202-315 (386)
279 3p5b_L Low density lipoprotein 97.5 0.0064 2.2E-07 38.5 17.4 111 19-129 159-275 (400)
280 1w6s_A Methanol dehydrogenase 97.5 0.0026 8.8E-08 42.5 10.4 77 39-115 452-530 (599)
281 3pbp_A Nucleoporin NUP82; beta 97.5 0.007 2.4E-07 38.8 12.6 101 28-130 30-157 (452)
282 4hw6_A Hypothetical protein, I 97.5 0.0071 2.4E-07 38.8 16.0 128 2-130 253-432 (433)
283 1n7d_A LDL receptor, low-densi 97.5 0.001 3.5E-08 45.2 8.6 109 21-129 455-569 (699)
284 3kya_A Putative phosphatase; s 97.5 0.0054 1.8E-07 40.1 11.6 110 20-129 140-276 (496)
285 3m0c_C LDL receptor, low-densi 97.5 0.012 4.2E-07 40.7 17.1 114 15-128 420-543 (791)
286 4a2l_A BT_4663, two-component 97.5 0.012 4.1E-07 40.5 19.3 107 19-129 406-524 (795)
287 2ism_A Putative oxidoreductase 97.4 0.0088 3E-07 37.2 11.9 99 18-119 30-153 (352)
288 1n7d_A LDL receptor, low-densi 97.3 0.0007 2.4E-08 45.9 6.4 125 3-127 390-524 (699)
289 3amr_A 3-phytase; beta-propell 97.3 0.011 3.8E-07 36.9 14.6 110 19-129 128-261 (355)
290 3das_A Putative oxidoreductase 97.3 0.012 4.2E-07 36.7 14.7 104 16-119 29-158 (347)
291 3a9g_A Putative uncharacterize 97.2 0.014 4.8E-07 36.4 12.9 100 17-119 27-153 (354)
292 2p9w_A MAL S 1 allergenic prot 97.2 0.015 5E-07 36.1 13.1 74 20-93 138-218 (334)
293 1kv9_A Type II quinohemoprotei 97.2 0.013 4.4E-07 39.7 11.2 55 40-94 438-492 (668)
294 3sre_A PON1, serum paraoxonase 97.1 0.018 6.1E-07 36.1 13.4 99 19-119 165-285 (355)
295 2p4o_A Hypothetical protein; p 97.1 0.017 5.8E-07 35.0 17.8 124 3-129 57-196 (306)
296 3sbq_A Nitrous-oxide reductase 97.1 0.029 9.9E-07 37.5 13.2 71 59-129 322-406 (638)
297 1cru_A Protein (soluble quinop 97.0 0.028 9.4E-07 36.4 14.5 103 17-119 25-162 (454)
298 3sbq_A Nitrous-oxide reductase 97.0 0.022 7.5E-07 38.0 10.6 104 16-119 320-453 (638)
299 3m0c_C LDL receptor, low-densi 97.0 0.044 1.5E-06 38.1 16.9 111 19-129 471-587 (791)
300 3sov_A LRP-6, low-density lipo 97.0 0.024 8.2E-07 34.8 18.2 112 17-129 120-236 (318)
301 3s25_A Hypothetical 7-bladed b 96.9 0.027 9.2E-07 34.4 9.9 89 24-119 109-202 (302)
302 2g8s_A Glucose/sorbosone dehyd 96.7 0.043 1.5E-06 34.2 10.0 102 18-119 17-148 (353)
303 3s94_A LRP-6, low-density lipo 96.7 0.066 2.3E-06 36.1 16.2 104 16-119 37-145 (619)
304 3s94_A LRP-6, low-density lipo 96.7 0.067 2.3E-06 36.1 15.4 110 19-128 84-199 (619)
305 2vpj_A Kelch-like protein 12; 96.6 0.045 1.6E-06 32.9 9.7 97 29-129 159-276 (301)
306 4a0p_A LRP6, LRP-6, low-densit 96.6 0.087 3E-06 35.6 18.5 110 18-128 122-234 (628)
307 4a2l_A BT_4663, two-component 96.6 0.099 3.4E-06 36.1 17.4 107 19-128 357-477 (795)
308 3v9f_A Two-component system se 96.4 0.12 4.1E-06 35.6 16.0 107 18-128 449-565 (781)
309 3v9f_A Two-component system se 96.4 0.13 4.4E-06 35.5 15.6 106 19-128 407-521 (781)
310 4a0p_A LRP6, LRP-6, low-densit 96.4 0.12 4E-06 35.0 17.7 118 2-119 18-141 (628)
311 2xzh_A Clathrin heavy chain 1; 96.4 0.085 2.9E-06 33.0 13.3 101 1-103 89-202 (365)
312 2xn4_A Kelch-like protein 2; s 96.1 0.1 3.5E-06 31.4 9.8 97 29-129 155-274 (302)
313 3qqz_A Putative uncharacterize 96.0 0.1 3.6E-06 31.1 15.7 108 18-127 120-249 (255)
314 3ei3_A DNA damage-binding prot 95.9 0.31 1.1E-05 35.5 15.0 106 20-128 515-633 (1158)
315 1tl2_A L10, protein (tachylect 95.8 0.096 3.3E-06 30.8 7.2 63 60-127 41-112 (236)
316 3s25_A Hypothetical 7-bladed b 95.4 0.23 7.9E-06 30.3 10.5 88 24-118 150-240 (302)
317 4asc_A Kelch repeat and BTB do 95.3 0.24 8.2E-06 30.0 8.9 88 29-120 148-252 (315)
318 3ii7_A Kelch-like protein 7; p 95.3 0.24 8.1E-06 29.9 10.4 64 29-94 55-131 (306)
319 1bpo_A Protein (clathrin); cla 95.3 0.35 1.2E-05 31.6 14.3 106 1-108 88-206 (494)
320 2xn4_A Kelch-like protein 2; s 95.1 0.28 9.6E-06 29.5 9.7 98 29-129 108-227 (302)
321 2xbg_A YCF48-like protein; pho 95.0 0.32 1.1E-05 29.9 14.8 106 19-127 122-230 (327)
322 1zgk_A Kelch-like ECH-associat 95.0 0.31 1E-05 29.5 9.3 97 29-129 168-285 (308)
323 1zgk_A Kelch-like ECH-associat 94.8 0.34 1.2E-05 29.3 8.6 97 29-129 121-238 (308)
324 3ii7_A Kelch-like protein 7; p 94.8 0.35 1.2E-05 29.1 9.6 97 29-129 101-223 (306)
325 3sre_A PON1, serum paraoxonase 94.4 0.54 1.8E-05 29.6 15.4 108 20-129 113-250 (355)
326 3zwu_A Alkaline phosphatase PH 94.3 0.59 2E-05 31.6 8.7 57 62-118 478-548 (592)
327 2wg3_C Hedgehog-interacting pr 94.2 0.7 2.4E-05 30.1 13.3 102 19-120 14-158 (463)
328 4gq2_M Nucleoporin NUP120; bet 94.2 0.56 1.9E-05 33.5 8.8 34 61-94 237-270 (950)
329 1xi4_A Clathrin heavy chain; a 94.1 1.4 4.6E-05 33.4 10.6 130 1-130 127-288 (1630)
330 2ism_A Putative oxidoreductase 93.9 0.68 2.3E-05 28.8 10.8 56 59-117 30-94 (352)
331 2vpj_A Kelch-like protein 12; 93.8 0.6 2.1E-05 28.0 10.8 97 29-129 62-182 (301)
332 2xzh_A Clathrin heavy chain 1; 93.7 0.78 2.7E-05 28.9 14.1 125 2-126 183-327 (365)
333 3ei3_A DNA damage-binding prot 93.3 1.7 5.9E-05 31.9 12.8 124 1-127 809-951 (1158)
334 3a9g_A Putative uncharacterize 93.0 0.99 3.4E-05 28.2 9.8 51 59-111 28-83 (354)
335 4a9v_A PHOX; hydrolase, beta-p 92.6 1.6 5.4E-05 29.5 9.5 59 60-118 476-548 (592)
336 3zwu_A Alkaline phosphatase PH 92.2 1.9 6.4E-05 29.3 8.5 58 20-77 477-548 (592)
337 2zwa_A Leucine carboxyl methyl 91.7 2.3 7.8E-05 29.3 10.7 101 29-129 451-575 (695)
338 2zwa_A Leucine carboxyl methyl 91.7 2.3 7.8E-05 29.3 12.2 92 1-92 470-579 (695)
339 2uvk_A YJHT; unknown function, 91.5 1.5 5.3E-05 27.0 9.4 54 40-94 168-232 (357)
340 4asc_A Kelch repeat and BTB do 91.3 1.5 5.2E-05 26.5 11.4 127 2-129 16-172 (315)
341 2be1_A Serine/threonine-protei 90.6 0.59 2E-05 29.2 4.8 93 2-94 23-134 (339)
342 1cru_A Protein (soluble quinop 90.5 2.5 8.4E-05 27.5 10.4 53 59-111 26-87 (454)
343 3das_A Putative oxidoreductase 90.4 2.2 7.5E-05 26.8 12.2 55 57-111 29-90 (347)
344 2woz_A Kelch repeat and BTB do 90.0 2.1 7.2E-05 25.9 11.0 126 2-129 27-182 (318)
345 2xbg_A YCF48-like protein; pho 89.9 2.2 7.6E-05 26.1 17.0 105 17-124 161-272 (327)
346 4a9v_A PHOX; hydrolase, beta-p 89.1 3.9 0.00013 27.8 9.5 59 19-77 476-548 (592)
347 2woz_A Kelch repeat and BTB do 88.8 2.6 9E-05 25.5 9.8 65 29-94 109-188 (318)
348 4fhn_B Nucleoporin NUP120; pro 87.7 0.66 2.3E-05 33.8 3.9 33 62-94 240-272 (1139)
349 2be1_A Serine/threonine-protei 84.7 1.5 5.1E-05 27.4 4.0 64 31-94 11-80 (339)
350 4gq2_M Nucleoporin NUP120; bet 84.4 1.9 6.6E-05 30.9 4.8 33 20-52 237-269 (950)
351 1bpo_A Protein (clathrin); cla 83.3 7.8 0.00027 25.7 16.7 125 2-126 182-326 (494)
352 3f7f_A Nucleoporin NUP120; nuc 81.3 2.4 8.3E-05 29.5 4.2 31 62-94 224-254 (729)
353 1xi4_A Clathrin heavy chain; a 79.7 19 0.00066 27.9 10.9 48 61-108 260-308 (1630)
354 4fhn_B Nucleoporin NUP120; pro 77.6 1.6 5.3E-05 31.9 2.6 29 102-130 239-267 (1139)
355 3ott_A Two-component system se 77.2 15 0.00053 25.4 14.6 105 19-128 146-257 (758)
356 2g8s_A Glucose/sorbosone dehyd 75.3 12 0.00042 23.3 10.2 69 61-130 272-351 (353)
357 2uvk_A YJHT; unknown function, 70.2 16 0.00055 22.4 11.5 52 29-80 65-128 (357)
358 3f7f_A Nucleoporin NUP120; nuc 65.9 16 0.00053 25.7 5.1 30 21-52 224-253 (729)
359 2wg3_C Hedgehog-interacting pr 55.7 41 0.0014 22.1 8.3 52 60-111 14-79 (463)
360 1q47_A Semaphorin 3A; beta pro 47.4 61 0.0021 21.7 7.0 54 32-85 423-487 (495)
361 2loj_A Putative cytoplasmic pr 45.6 23 0.00078 16.2 2.7 22 14-35 41-62 (63)
362 1ukf_A Avirulence protein AVRP 44.5 23 0.0008 20.2 2.7 31 101-131 119-150 (188)
363 3q6k_A 43.2 kDa salivary prote 44.4 61 0.0021 20.8 17.1 118 1-118 183-341 (381)
364 3ott_A Two-component system se 40.3 91 0.0031 21.7 17.1 95 20-119 104-209 (758)
365 3uc1_A DNA gyrase subunit A; D 38.5 71 0.0024 19.9 14.1 112 16-128 92-225 (327)
366 3q6k_A 43.2 kDa salivary prote 38.1 79 0.0027 20.3 18.3 129 1-129 125-304 (381)
367 3al9_A Plexin-A2; beta-propell 36.2 86 0.0029 21.2 4.8 66 20-85 401-476 (539)
368 4gz8_A Semaphorin-3A; multi-do 35.1 1.2E+02 0.004 21.4 6.7 54 32-85 431-495 (667)
369 2jra_A Protein RPA2121; domain 34.3 39 0.0013 15.7 3.5 22 14-35 45-66 (67)
370 1uhe_A Aspartate 1-decarboxyla 30.3 58 0.002 16.4 3.1 15 1-15 19-33 (97)
371 1olz_A Semaphorin 4D; developm 29.5 1.5E+02 0.005 20.8 7.6 54 73-126 417-477 (663)
372 1vc3_B L-aspartate-alpha-decar 29.2 60 0.0021 16.3 3.2 15 1-15 20-34 (96)
373 4gz8_A Semaphorin-3A; multi-do 29.1 87 0.003 22.0 4.1 32 16-48 467-498 (667)
374 3no0_A DNA gyrase subunit A; D 28.7 1E+02 0.0034 18.6 14.0 113 15-129 64-194 (276)
375 3b7f_A Glycosyl hydrolase, BNR 27.9 1.1E+02 0.0039 19.1 11.8 19 18-36 54-74 (394)
376 4h3o_A Lectin; cadmium, plant 27.8 63 0.0022 16.1 6.0 14 76-89 56-69 (105)
377 1q47_A Semaphorin 3A; beta pro 27.5 1.4E+02 0.0048 20.0 6.9 28 99-126 460-487 (495)
378 1suu_A DNA gyrase subunit A; t 27.1 1.1E+02 0.0039 18.8 13.9 111 18-129 99-229 (312)
379 3plx_B Aspartate 1-decarboxyla 26.2 73 0.0025 16.2 3.2 15 1-15 20-34 (102)
380 3oug_A Aspartate 1-decarboxyla 25.5 79 0.0027 16.4 3.3 15 1-15 47-61 (114)
381 1b2p_A Protein (lectin); manno 25.2 78 0.0027 16.2 7.0 14 74-87 64-77 (119)
382 2c45_A Aspartate 1-decarboxyla 23.3 98 0.0034 16.7 3.2 15 1-15 44-58 (139)
383 4hvt_A Ritya.17583.B, post-pro 22.8 2.1E+02 0.0071 20.3 7.6 92 22-113 132-252 (711)
384 1pqh_A Aspartate 1-decarboxyla 22.7 94 0.0032 16.9 2.7 15 1-15 61-75 (143)
385 3c12_A FLGD, flagellar protein 20.7 1.1E+02 0.0037 16.2 5.4 8 61-68 108-115 (138)
386 1olz_A Semaphorin 4D; developm 20.5 2.3E+02 0.0078 19.9 7.7 54 32-85 417-477 (663)
387 3mez_B Mannose-specific lectin 20.4 98 0.0033 15.6 7.1 12 116-127 93-104 (113)
388 2hc5_A ORF 99, hypothetical pr 20.1 71 0.0024 16.6 1.9 15 1-15 71-85 (117)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-31 Score=162.27 Aligned_cols=130 Identities=18% Similarity=0.319 Sum_probs=121.1
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++.+..+ +|...|.+++|+|++++|++++.|+.|++||+.+... ..+.+|...|.+++|+|+++++++++
T Consensus 188 i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s 267 (321)
T 3ow8_A 188 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS 267 (321)
T ss_dssp EEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 589999999998888 7899999999999999999999999999999988775 56788999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||+.+++.+ ....|...|.+++|+|++++|++++.|+.|++||.-
T Consensus 268 ~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 268 SDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999888 667899999999999999999999999999999964
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.98 E-value=5e-30 Score=156.66 Aligned_cols=130 Identities=22% Similarity=0.321 Sum_probs=119.8
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++....+ .+...+.+++|+|++++|++++.|+.|++||+.+++. ..+..|...|.+++|+|+++++++++
T Consensus 146 v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s 225 (321)
T 3ow8_A 146 VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS 225 (321)
T ss_dssp EEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEEC
T ss_pred EEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEc
Confidence 579999999888777 7778899999999999999999999999999998875 56778999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.|++||+++++.. ...+|...|.+++|+|+++++++++.|++|++||+.
T Consensus 226 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 226 DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 9999999999988877 677899999999999999999999999999999974
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.98 E-value=2.5e-30 Score=156.85 Aligned_cols=130 Identities=12% Similarity=0.210 Sum_probs=119.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++.+..+ .|...|.+++|+|++++|++++.|+.|++||+.+++. ..+.+|...|.+++|+|+++++++++
T Consensus 37 v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs 116 (304)
T 2ynn_A 37 VELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS 116 (304)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred EEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEEC
Confidence 589999999988887 7888999999999999999999999999999998875 66788999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE--EecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI--FQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||++++... ...+|...|.+++|+| ++..+++++.|++|++||++
T Consensus 117 ~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~ 171 (304)
T 2ynn_A 117 DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (304)
T ss_dssp TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 9999999999887554 5678999999999999 67899999999999999973
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=9.5e-30 Score=156.36 Aligned_cols=128 Identities=17% Similarity=0.235 Sum_probs=115.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~ 76 (131)
|++||+++++....+ +|...|.+++|+|+++.+++++.|+.+++||+++........ +...+.+++|+|+|+++++
T Consensus 208 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 287 (340)
T 1got_B 208 AKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA 287 (340)
T ss_dssp EEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred EEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEE
Confidence 589999999988888 799999999999999999999999999999998876533222 3347999999999999999
Q ss_pred eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
++.|+.+++||..+++.. ...+|...|.+++|+|+++++++++.|+.|++||
T Consensus 288 g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 288 GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999988877 6778999999999999999999999999999996
No 5
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=4e-30 Score=159.48 Aligned_cols=129 Identities=16% Similarity=0.158 Sum_probs=107.2
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe----------------------------
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---------------------------- 52 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---------------------------- 52 (131)
|++||+++++++..+.|...|.+++|+|+|+++++++.++ +.+|+..++..
T Consensus 159 i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~ 237 (365)
T 4h5i_A 159 MRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAA 237 (365)
T ss_dssp EEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEE
T ss_pred EEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEE
Confidence 5899999999888888888899999999999998887554 44444432210
Q ss_pred -------------------------EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEE
Q psy15612 53 -------------------------YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLS 105 (131)
Q Consensus 53 -------------------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~ 105 (131)
..+..|...|.+++|+|||++|++++.|+.|++||+++++.+ .+.+|...|.+
T Consensus 238 s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~ 317 (365)
T 4h5i_A 238 SLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITE 317 (365)
T ss_dssp EESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEE
T ss_pred ecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEE
Confidence 012345667889999999999999999999999999999987 35679999999
Q ss_pred EEECCCCCEEEEecCCCcEEEEEee
Q psy15612 106 CDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 106 ~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++|+|+|++|++++.|++|+|||+.
T Consensus 318 v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 318 VTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEECTTSCEEEEEETTSEEEEEECC
T ss_pred EEECCCCCEEEEEeCCCeEEEEEcC
Confidence 9999999999999999999999973
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=2.1e-29 Score=154.79 Aligned_cols=130 Identities=15% Similarity=0.238 Sum_probs=117.4
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++.+..+ +|.+.|.+++|+|+++.+++++.|+.+++||++++.. ..+..|...|.+++|+|+++.+++++
T Consensus 166 i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s 245 (340)
T 1got_B 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc
Confidence 589999999998888 7999999999999999999999999999999998875 56788999999999999999999999
Q ss_pred CCCeEEEeeCCCCceEEecC---CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASIFQSK---ESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||+++++.+.... +...+.+++|+|+++++++++.|+.|++||+.
T Consensus 246 ~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence 99999999999888763332 33579999999999999999999999999963
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=2.1e-29 Score=155.19 Aligned_cols=130 Identities=18% Similarity=0.166 Sum_probs=112.4
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCC-CEE
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACG-KWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~~ 74 (131)
|++||+++++....+ .+...+.+++|+|+ ++++++|+.|+.|++||+++++. ..+.+|...|.+++|+|++ +++
T Consensus 194 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~l 273 (344)
T 4gqb_B 194 ILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFL 273 (344)
T ss_dssp EEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCE
T ss_pred cccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEE
Confidence 689999999888776 35567999999995 56788999999999999998775 6788999999999999998 578
Q ss_pred EEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 75 VSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
++++.|+.|++||..+++.....+|.+.|.+++|+|+++ ++++++.|++|++|++.
T Consensus 274 asgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 274 ASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 999999999999999998877788999999999999986 56789999999999973
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=1.3e-29 Score=159.21 Aligned_cols=130 Identities=17% Similarity=0.231 Sum_probs=121.2
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++....+ +|...|.+++|+|++++|++++.|++|++||+.+.++ ..+.+|...|.+++|+|+++++++++
T Consensus 132 i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s 211 (410)
T 1vyh_C 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS 211 (410)
T ss_dssp EEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEE
T ss_pred EEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 689999999988888 8999999999999999999999999999999988775 56788999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||+.++..+ ...+|...+.+++++|+++++++++.|+.|++||++
T Consensus 212 ~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~ 264 (410)
T 1vyh_C 212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264 (410)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 9999999999999887 667899999999999999999999999999999963
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=6.4e-29 Score=151.58 Aligned_cols=130 Identities=17% Similarity=0.213 Sum_probs=119.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccC------CCE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAAC------GKW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~ 73 (131)
|++||+++++.+..+ +|...|.+++|+|++..+++++.|+.+++||+.......+.+|...+.++.|+|. +..
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 689999999998887 8999999999999999999999999999999987767778889999999999985 448
Q ss_pred EEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++++.|+.+++||+.+++.. ...+|...|.+++|+|+++++++++.|+.|++||++
T Consensus 169 l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred EEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999999988877 667899999999999999999999999999999974
No 10
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=6.5e-29 Score=153.45 Aligned_cols=128 Identities=19% Similarity=0.296 Sum_probs=115.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-e--ccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-H--LHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~--~~~~~v~~~~~~~~~~~~~~ 76 (131)
|++||+++++++..+ .|...|.+++|+|++..+++++.|+.+++||++....... . .+...+.+++|+|+++++++
T Consensus 222 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 301 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA 301 (354)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred EEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE
Confidence 589999999998888 7899999999999999999999999999999988764332 2 22346889999999999999
Q ss_pred eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
++.|+.+++||+.+++.+ ...+|...|.+++|+|++++|++++.|++|++|+
T Consensus 302 g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 302 GYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999988877 6678999999999999999999999999999996
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=3.3e-29 Score=157.31 Aligned_cols=130 Identities=20% Similarity=0.305 Sum_probs=118.4
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCC--------------------CCEEEEEeCCCcEEEEeCCCCCe-EEeecc
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS--------------------GEWLAVGMENSNVEVLHALKPDK-YQLHLH 58 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~--------------------~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~ 58 (131)
|++||++++++...+ .|...|.+++|+|+ +.++++++.|+.|++||+.++.+ ..+.+|
T Consensus 258 v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 258 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence 589999999988877 89999999999996 67899999999999999998875 667889
Q ss_pred ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
...|.+++|+|+++++++++.|+.|++||+.+++.+ ....|...|.+++|+|+++++++++.|+.|++|+++
T Consensus 338 ~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999999999999999999999999988877 667899999999999999999999999999999975
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=1.8e-28 Score=148.83 Aligned_cols=130 Identities=15% Similarity=0.220 Sum_probs=120.4
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||..+++....+ .|...|.+++|+|+++.|++++.|+.+++||+.+++. ..+..|...+.++.|+|+++++++++
T Consensus 47 i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 126 (312)
T 4ery_A 47 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 126 (312)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred EEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 589999999888877 7899999999999999999999999999999998875 66788999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||+++++.. ....|...+.+++|+|+++++++++.|+.|++||++
T Consensus 127 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~ 179 (312)
T 4ery_A 127 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 179 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 9999999999998887 666788999999999999999999999999999974
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=3.7e-29 Score=154.73 Aligned_cols=130 Identities=15% Similarity=0.176 Sum_probs=115.3
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCC-CEE
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACG-KWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~~ 74 (131)
|++||+++++....+ .+...+.+++|+|+ +.++++++.|+.|++||+++++. ..+..|...|.+++|+|++ +++
T Consensus 206 v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~l 285 (357)
T 4g56_B 206 ILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFL 285 (357)
T ss_dssp EEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCE
T ss_pred eEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEE
Confidence 589999998877654 46678999999997 56788999999999999988775 6678899999999999987 578
Q ss_pred EEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612 75 VSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~ 130 (131)
++++.|+.|++||+++++.....+|.+.|.+++|+| ++++|++++.|++|++||+.
T Consensus 286 asgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 286 ASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp EEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 899999999999999998887778999999999998 78999999999999999973
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=6.3e-29 Score=153.09 Aligned_cols=130 Identities=15% Similarity=0.143 Sum_probs=111.8
Q ss_pred CEEEeCCCCceeeee-----cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCC-E
Q psy15612 1 MYLQSVSPGRQLQQH-----DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGK-W 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~-~ 73 (131)
|++||+++++.+... +|.+.|.+++|+|++++|++++.|++|++||+.++++ ..+.+|...|.+++|+|++. .
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 689999988765432 7899999999999999999999999999999998875 66788999999999999875 7
Q ss_pred EEEeCCCCeEEEeeCCCCceEEe---cCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWRTPYGASIFQ---SKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~~~---~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~ 130 (131)
+++++.|+.|++||+++++.... ..+...+.+++|+|+ ++++++++.|+.|++||++
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 88999999999999999887722 345677999999985 5688999999999999975
No 15
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=1e-28 Score=153.73 Aligned_cols=130 Identities=16% Similarity=0.280 Sum_probs=112.2
Q ss_pred CEEEeCC-CCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-eecc-------ccceEEEEEccC
Q psy15612 1 MYLQSVS-PGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-LHLH-------ESCVLSLRFAAC 70 (131)
Q Consensus 1 i~iwd~~-~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~~-------~~~v~~~~~~~~ 70 (131)
|++||++ +++.+..+ +|.+.|.+++|+|+++.+++++.|+++++||++++.... +..+ ...+.+++|+|+
T Consensus 230 v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 309 (380)
T 3iz6_a 230 VRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSIS 309 (380)
T ss_dssp EEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSS
T ss_pred EEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCC
Confidence 5899998 45666666 899999999999999999999999999999999887532 2222 234889999999
Q ss_pred CCEEEEeCCCCeEEEeeCCCCceE-Ee----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 71 GKWFVSTGKDNLLNAWRTPYGASI-FQ----SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 71 ~~~~~~~~~~~~i~~w~~~~~~~~-~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+++++++.|+.+++||..+++.. .. .+|.+.|.+++|+|++++|++++.|+.|++|++.
T Consensus 310 g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 310 GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp SSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred CCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 999999999999999999988876 22 4688999999999999999999999999999974
No 16
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=4.2e-28 Score=151.55 Aligned_cols=130 Identities=19% Similarity=0.299 Sum_probs=116.8
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEcc-CCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAA-CGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~ 78 (131)
|++||+++++.+..+ +|...|.+++|+|++..|++++.|+.+++||+++++......+...+.+++|+| +++++++++
T Consensus 147 i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s 226 (393)
T 1erj_A 147 IRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGS 226 (393)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEE
T ss_pred EEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEc
Confidence 689999999988877 899999999999999999999999999999999888655555677899999999 899999999
Q ss_pred CCCeEEEeeCCCCceE-Ee-------cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQ-------SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||+++++.. .. .+|...|.+++|+|+++++++++.|+.|++||++
T Consensus 227 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 227 LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 286 (393)
T ss_dssp TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 9999999999988776 22 4688999999999999999999999999999974
No 17
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=9.3e-28 Score=146.36 Aligned_cols=131 Identities=88% Similarity=1.381 Sum_probs=123.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
|++||+++++.+..+.+...+.+++|+|+++.+++++.++.+++|++.+.+...+..|...+.+++|+|+++++++++.|
T Consensus 207 i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 207 VRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCC
Confidence 58999999999888888899999999999999999999999999999998887888899999999999999999999999
Q ss_pred CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612 81 NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 81 ~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~ 131 (131)
+.+++||+.+++......+...+.+++|+|+++++++++.|+.+++||+.|
T Consensus 287 g~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 337 (337)
T 1gxr_A 287 NLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY 337 (337)
T ss_dssp SEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEEC
T ss_pred CcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEeC
Confidence 999999999998887777899999999999999999999999999999987
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=4.1e-28 Score=158.68 Aligned_cols=130 Identities=14% Similarity=0.243 Sum_probs=115.7
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEee-------ccccceEEEEEccCC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLH-------LHESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~-------~~~~~v~~~~~~~~~ 71 (131)
|++||.++++....+ +|...|.+++|+|++++|++++.|+++++||+.+++. ..+. +|...|.+++|+|++
T Consensus 172 v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg 251 (611)
T 1nr0_A 172 VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 251 (611)
T ss_dssp EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC
Confidence 589999988888877 8999999999999999999999999999999988775 3332 689999999999999
Q ss_pred CEEEEeCCCCeEEEeeCCCCceE--------------------------------------------EecCCCCCeEEEE
Q psy15612 72 KWFVSTGKDNLLNAWRTPYGASI--------------------------------------------FQSKESSSVLSCD 107 (131)
Q Consensus 72 ~~~~~~~~~~~i~~w~~~~~~~~--------------------------------------------~~~~~~~~v~~~~ 107 (131)
+++++++.|+.+++||+.+++.. ...+|...|.+++
T Consensus 252 ~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~ 331 (611)
T 1nr0_A 252 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALS 331 (611)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEE
Confidence 99999999999999999877653 1235788999999
Q ss_pred ECCCCCEEEEecCCCcEEEEEee
Q psy15612 108 ISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 108 ~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+|+++++++++.|++|++||+.
T Consensus 332 ~spdg~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 332 SSADGKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETT
T ss_pred EeCCCCEEEEEeCCCcEEEEECC
Confidence 99999999999999999999963
No 19
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=2.9e-28 Score=147.81 Aligned_cols=119 Identities=14% Similarity=0.284 Sum_probs=109.8
Q ss_pred eeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612 12 LQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP 89 (131)
Q Consensus 12 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~ 89 (131)
...+ +|.+.|.+++|+|+++++++++.|+.+++||+.++.. ..+..|...+.+++|+|+++++++++.|+.|++||+.
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~ 85 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 3445 8999999999999999999999999999999988775 6677889999999999999999999999999999999
Q ss_pred CCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 90 YGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 90 ~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++.+ ....|...|.+++|+|+++++++++.|++|++||++
T Consensus 86 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~ 127 (304)
T 2ynn_A 86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127 (304)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGG
T ss_pred CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECC
Confidence 99887 677899999999999999999999999999999974
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=5e-28 Score=149.01 Aligned_cols=130 Identities=15% Similarity=0.204 Sum_probs=114.0
Q ss_pred CEEEeCCCCc--eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe----EEeeccccceEEEEEccCCCE
Q psy15612 1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK----YQLHLHESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~ 73 (131)
|++||..+++ ++..+ +|...|.+++|+|++++|++++.|+.+++||+..... ..+..|...|.+++|+|++++
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 5799988764 44555 7999999999999999999999999999999986542 345678999999999999999
Q ss_pred EEEeCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++++.|+.+++||..+++.. ...+|...|.+++|+|++++|++++.|++|++||..
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 999999999999999877643 566799999999999999999999999999999963
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=6.5e-28 Score=148.31 Aligned_cols=128 Identities=23% Similarity=0.382 Sum_probs=113.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee---ccccceEEEEEccCC-----
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH---LHESCVLSLRFAACG----- 71 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~----- 71 (131)
|++||+++++.+..+ +|...|.+++|+|+++.|++++.|+.+++||+......... .|...+.+++|+|++
T Consensus 100 v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 179 (343)
T 2xzm_R 100 LRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANK 179 (343)
T ss_dssp EEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSC
T ss_pred EEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccc
Confidence 689999999988887 89999999999999999999999999999999854433332 678889999999987
Q ss_pred -----CEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 72 -----KWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 72 -----~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+++++++.|+.+++||.. ++.. ....|...|.+++|+|++++|++++.|+.|++||+
T Consensus 180 ~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 180 VQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp CCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred cCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 789999999999999954 4444 66789999999999999999999999999999997
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.9e-28 Score=147.13 Aligned_cols=130 Identities=18% Similarity=0.234 Sum_probs=106.1
Q ss_pred CEEEeCCCC--ceeeee--c-CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC-------C-eEEeeccccceEEEEE
Q psy15612 1 MYLQSVSPG--RQLQQH--D-FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP-------D-KYQLHLHESCVLSLRF 67 (131)
Q Consensus 1 i~iwd~~~~--~~~~~~--~-~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~-------~-~~~~~~~~~~v~~~~~ 67 (131)
|++||++++ +....+ . |...|.+++|+|++++|++++.|+.|++|++... + ...+.+|...|.+++|
T Consensus 36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~ 115 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAW 115 (330)
T ss_dssp EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEE
T ss_pred EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEE
Confidence 589999875 344444 3 8899999999999999999999999999998532 1 2456789999999999
Q ss_pred ccCCCEEEEeCCCCeEEEeeCCCC----ceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 68 AACGKWFVSTGKDNLLNAWRTPYG----ASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~w~~~~~----~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+|+++++++++.|+.+++||+... +.+ ...+|...|.+++|+|++++|++++.|++|++||+.
T Consensus 116 sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~ 183 (330)
T 2hes_X 116 SNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDY 183 (330)
T ss_dssp CTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 999999999999999999999532 233 566799999999999999999999999999999874
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=6e-28 Score=148.65 Aligned_cols=130 Identities=14% Similarity=0.219 Sum_probs=113.5
Q ss_pred CEEEeCCCCceee--ee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccCCCE
Q psy15612 1 MYLQSVSPGRQLQ--QH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~--~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~ 73 (131)
|++||+++++... .+ +|...|.+++|+|++++|++++.|+.+++|+..... ...+.+|...|.+++|+|++++
T Consensus 40 i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~ 119 (345)
T 3fm0_A 40 IRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNL 119 (345)
T ss_dssp EEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSE
T ss_pred EEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCE
Confidence 6899998876432 22 789999999999999999999999999999998765 2556789999999999999999
Q ss_pred EEEeCCCCeEEEeeCCCCce---E-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWRTPYGAS---I-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~---~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++++.|+.+++||+.++.. . ....|...|.+++|+|+++++++++.|+.|++||++
T Consensus 120 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~ 180 (345)
T 3fm0_A 120 LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE 180 (345)
T ss_dssp EEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred EEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEec
Confidence 99999999999999987643 2 456789999999999999999999999999999974
No 24
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=1.4e-27 Score=144.94 Aligned_cols=130 Identities=21% Similarity=0.353 Sum_probs=118.4
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++.+..+ .|...|.+++|+|+++.+++++.|+.+++||+++++. ..+..|...+.++.|+|+++++++++
T Consensus 89 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
T 4ery_A 89 LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 168 (312)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 589999999988887 7899999999999999999999999999999998875 56778889999999999999999999
Q ss_pred CCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||+++++.+ ....+...+..++|+|+++++++++.|+.|++||++
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 222 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 222 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred CCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 9999999999998877 334567789999999999999999999999999974
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.96 E-value=4.8e-28 Score=156.86 Aligned_cols=126 Identities=24% Similarity=0.343 Sum_probs=113.2
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
|++||.. ++.+..+ +|...|.+++|+|++++|++++.|+.|++|+........+.+|...|.+++|+|+++++++++.
T Consensus 450 v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 450 VKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp EEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred EEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEEC
Confidence 5799965 5566555 8999999999999999999999999999999765556778899999999999999999999999
Q ss_pred CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
|+.|++||. +++.+ ...+|.+.|.+++|+|++++|++++.|+.|++||
T Consensus 529 dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 529 DKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp TSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999996 46665 6778999999999999999999999999999997
No 26
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=1.6e-27 Score=147.23 Aligned_cols=130 Identities=22% Similarity=0.271 Sum_probs=115.4
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
|++||+++++.+..+ +|...|.+++++| ++..+++++.|+.+++||++++++ ..+..|...|.+++|+|+++.+++
T Consensus 178 v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 257 (354)
T 2pbi_B 178 CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFAS 257 (354)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEE
Confidence 589999999998888 8999999999987 468999999999999999998885 567789999999999999999999
Q ss_pred eCCCCeEEEeeCCCCceEEe-c--CCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASIFQ-S--KESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~~~-~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.|+.+++||+++++.... . .+...+.+++|+|+++++++++.|+.|++||+.
T Consensus 258 ~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 258 GSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence 99999999999998876632 2 234578999999999999999999999999973
No 27
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.3e-27 Score=145.32 Aligned_cols=130 Identities=14% Similarity=0.203 Sum_probs=106.9
Q ss_pred CEEEeCCC-------Cceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC-C----eEEeeccccceEEEEE
Q psy15612 1 MYLQSVSP-------GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP-D----KYQLHLHESCVLSLRF 67 (131)
Q Consensus 1 i~iwd~~~-------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~-~----~~~~~~~~~~v~~~~~ 67 (131)
|++||++. .+.+..+ +|...|.+++|+|++++|++++.|+.|++||+... . ...+..|...|.+++|
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 58999853 2344555 79999999999999999999999999999999432 2 2456789999999999
Q ss_pred ccCCCEEEEeCCCCeEEEeeCCCC--ceE-EecCCCCCeEEEEECCC--CCEEEEecCCCcEEEEEee
Q psy15612 68 AACGKWFVSTGKDNLLNAWRTPYG--ASI-FQSKESSSVLSCDISAD--DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~w~~~~~--~~~-~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw~~~ 130 (131)
+|+++++++++.|+.+++||..++ +.+ ...+|...|.+++|+|+ +.++++++.|++|++||++
T Consensus 162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence 999999999999999999998776 334 56789999999999998 6789999999999999974
No 28
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=1.4e-26 Score=141.47 Aligned_cols=129 Identities=14% Similarity=0.191 Sum_probs=111.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
|++||+++++.+..+ +|...|.+++|+|++++|++++.|+.+++||+.+.+......+...+..+.|+|++..+ +++.
T Consensus 197 i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~ 275 (340)
T 4aow_A 197 VKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAAT 275 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE-EEEE
T ss_pred EEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCcee-eccC
Confidence 589999999988887 89999999999999999999999999999999988865555566789999999987655 5556
Q ss_pred CCeEEEeeCCCCceE-E---------ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 80 DNLLNAWRTPYGASI-F---------QSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~-~---------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+.+++||++++... . ...|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 276 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 276 GPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp TTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred CCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 999999999877654 1 23578899999999999999999999999999985
No 29
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=6.1e-27 Score=146.32 Aligned_cols=130 Identities=26% Similarity=0.367 Sum_probs=114.5
Q ss_pred CEEEeCCCCceeeee-cCC------------------CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeecccc
Q psy15612 1 MYLQSVSPGRQLQQH-DFS------------------SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHES 60 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~------------------~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~ 60 (131)
+++|++.+++.+..+ .+. ..|.+++|+|++++|++++.|+.|++||+.+++. ..+.+|..
T Consensus 87 v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~ 166 (393)
T 1erj_A 87 TQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQ 166 (393)
T ss_dssp EEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred EEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCC
Confidence 479999999887766 222 1389999999999999999999999999998875 56788999
Q ss_pred ceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612 61 CVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|.+++|+|+++.+++++.|+.+++||+++++......+...+.+++|+| +++++++++.|+.|++||++
T Consensus 167 ~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~ 237 (393)
T 1erj_A 167 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE 237 (393)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETT
T ss_pred CEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 99999999999999999999999999999998875556778899999999 89999999999999999963
No 30
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=9.7e-27 Score=144.86 Aligned_cols=129 Identities=17% Similarity=0.265 Sum_probs=112.0
Q ss_pred CEEEeCCCCceeeee------cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCC-C-eEEeeccccceEEEEEccCC
Q psy15612 1 MYLQSVSPGRQLQQH------DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKP-D-KYQLHLHESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~~~~~~~------~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~-~-~~~~~~~~~~v~~~~~~~~~ 71 (131)
|++||+++++.+..+ +|...|.++.|+| ++.++++++.|+.|++||++.. . ...+.+|...|.+++|+|++
T Consensus 182 i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~ 261 (380)
T 3iz6_a 182 CVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDG 261 (380)
T ss_dssp EEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTS
T ss_pred EEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCC
Confidence 589999999888654 4778899999987 7899999999999999999743 3 46678899999999999999
Q ss_pred CEEEEeCCCCeEEEeeCCCCceE-EecCC-------CCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 72 KWFVSTGKDNLLNAWRTPYGASI-FQSKE-------SSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 72 ~~~~~~~~~~~i~~w~~~~~~~~-~~~~~-------~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+++++++.|+.+++||+++++.+ ....+ ...+.+++|+|+|+++++++.|+.|++||+
T Consensus 262 ~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~ 327 (380)
T 3iz6_a 262 QRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDT 327 (380)
T ss_dssp SEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEET
T ss_pred CeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEEC
Confidence 99999999999999999998877 22221 234889999999999999999999999996
No 31
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=1.3e-26 Score=140.17 Aligned_cols=130 Identities=23% Similarity=0.304 Sum_probs=111.3
Q ss_pred CEEEeCCCCc--eeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccC--
Q psy15612 1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAAC-- 70 (131)
Q Consensus 1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~-- 70 (131)
|++||+++++ .+..+ .|...|.+++|+|+ +.+|++++.|+.+++||+.... ...+..|...+.+++|+|+
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcc
Confidence 6899998874 33444 68899999999997 8899999999999999998653 3456789999999999997
Q ss_pred -----------CCEEEEeCCCCeEEEeeCCCCc----eE-EecCCCCCeEEEEECCCC---CEEEEecCCCcEEEEEee
Q psy15612 71 -----------GKWFVSTGKDNLLNAWRTPYGA----SI-FQSKESSSVLSCDISADD---KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 71 -----------~~~~~~~~~~~~i~~w~~~~~~----~~-~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~vw~~~ 130 (131)
++.+++++.|+.|++||+++++ .. .+.+|...|.+++|+|++ +++++++.|++|++||+.
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp -----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 5789999999999999998765 23 456799999999999985 789999999999999974
No 32
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.1e-27 Score=148.46 Aligned_cols=129 Identities=13% Similarity=0.174 Sum_probs=107.4
Q ss_pred CEEEeCCCC--ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEEccCCCE
Q psy15612 1 MYLQSVSPG--RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~ 73 (131)
|++||+.++ +.+..+ +|...|.+++|+|++++|++++.|+.+++||+.++. ...+..|...+.+++|+|+++.
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 114 (377)
T 3dwl_C 35 VELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDK 114 (377)
T ss_dssp BCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSC
T ss_pred EEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCE
Confidence 579999988 666666 799999999999999999999999999999998766 4556789999999999999999
Q ss_pred EEEeCCCCeEEEeeCCCCce---E-EecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 74 FVSTGKDNLLNAWRTPYGAS---I-FQSK-ESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~---~-~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+++++.|+.+++||+.+++. . .... |...+.+++|+|+++++++++.|+.+++||+
T Consensus 115 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 115 FAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp CEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred EEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence 99999999999999998763 2 4444 8999999999999999999999999999997
No 33
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=2e-26 Score=139.34 Aligned_cols=130 Identities=14% Similarity=0.198 Sum_probs=111.4
Q ss_pred CEEEeCCCC--ceeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccC--
Q psy15612 1 MYLQSVSPG--RQLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAAC-- 70 (131)
Q Consensus 1 i~iwd~~~~--~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~-- 70 (131)
|++||++++ +.+..+ +|.+.|.+++|+|+ ++.|++++.|++|++||+.+++ ...+..|...|.+++|+|+
T Consensus 33 v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 112 (297)
T 2pm7_B 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY 112 (297)
T ss_dssp EEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGG
T ss_pred EEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCC
Confidence 689999743 556666 89999999999864 8999999999999999998764 3456678899999999997
Q ss_pred CCEEEEeCCCCeEEEeeCCCCce---EEecCCCCCeEEEEECCC-------------CCEEEEecCCCcEEEEEee
Q psy15612 71 GKWFVSTGKDNLLNAWRTPYGAS---IFQSKESSSVLSCDISAD-------------DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 71 ~~~~~~~~~~~~i~~w~~~~~~~---~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~d~~i~vw~~~ 130 (131)
++++++++.|+.+++||++++.. .....|...+.+++|+|+ +++|++++.|++|++||++
T Consensus 113 g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~ 188 (297)
T 2pm7_B 113 GPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 188 (297)
T ss_dssp CSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEE
T ss_pred CcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEc
Confidence 88999999999999999987642 256678999999999997 5789999999999999975
No 34
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=6.9e-27 Score=144.47 Aligned_cols=130 Identities=10% Similarity=0.123 Sum_probs=110.4
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCC-----------------------------------CEEEE--EeCCCcEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSG-----------------------------------EWLAV--GMENSNVE 43 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-----------------------------------~~l~~--~~~~~~v~ 43 (131)
|++||.++++.+..+.+...|.+++++++. ..++. ++.++.|+
T Consensus 83 v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~ 162 (355)
T 3vu4_A 83 VHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIH 162 (355)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEE
T ss_pred EEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEE
Confidence 589999999988888788889888888753 22333 46788899
Q ss_pred EEeCCCCC-----------------eEEeeccccceEEEEEccCCCEEEEeCCCCe-EEEeeCCCCceE-Eec-C-CCCC
Q psy15612 44 VLHALKPD-----------------KYQLHLHESCVLSLRFAACGKWFVSTGKDNL-LNAWRTPYGASI-FQS-K-ESSS 102 (131)
Q Consensus 44 ~~~~~~~~-----------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-i~~w~~~~~~~~-~~~-~-~~~~ 102 (131)
+||+.++. ...+.+|...|.+++|+|+|+++++++.|+. +++||+++++.+ ... + |...
T Consensus 163 iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~ 242 (355)
T 3vu4_A 163 ITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRAD 242 (355)
T ss_dssp EEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSC
T ss_pred EEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCc
Confidence 99988754 5667889999999999999999999999998 999999999988 333 4 8999
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 103 VLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 103 v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|.+++|+|+++++++++.|++|++||+.
T Consensus 243 v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 243 VVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp EEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 9999999999999999999999999974
No 35
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=9.8e-27 Score=145.53 Aligned_cols=130 Identities=21% Similarity=0.332 Sum_probs=113.8
Q ss_pred CEEEeCCCCc----eeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCC-------C-eEEeeccccceEEEE
Q psy15612 1 MYLQSVSPGR----QLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKP-------D-KYQLHLHESCVLSLR 66 (131)
Q Consensus 1 i~iwd~~~~~----~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~-------~-~~~~~~~~~~v~~~~ 66 (131)
|++||+.+.. ....+ +|.+.|.+++|+| ++..|++++.|+.|++|++.++ + ...+.+|...|.+++
T Consensus 59 i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 138 (402)
T 2aq5_A 59 FLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVA 138 (402)
T ss_dssp EEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEE
T ss_pred EEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEE
Confidence 5799986542 22334 7999999999999 8999999999999999999876 2 356788999999999
Q ss_pred EccCC-CEEEEeCCCCeEEEeeCCCCceE-Ee--cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 67 FAACG-KWFVSTGKDNLLNAWRTPYGASI-FQ--SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 67 ~~~~~-~~~~~~~~~~~i~~w~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+|++ +.+++++.|+.+++||+.+++.. .. ..|...+.+++|+|+++++++++.|+.|++||++
T Consensus 139 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 139 WHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp ECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred ECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence 99998 69999999999999999999887 44 5789999999999999999999999999999974
No 36
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=8e-27 Score=154.36 Aligned_cols=130 Identities=15% Similarity=0.268 Sum_probs=116.7
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe----eccccceEEEEEccCC--CE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL----HLHESCVLSLRFAACG--KW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~--~~ 73 (131)
|++||+.+++....+ +|...|.+++|+|+++.|++++.|++|++||........+ ..|...|.+++|+|++ ..
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 689999999988877 8999999999999999999999999999999876544333 3578889999999986 57
Q ss_pred EEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++++.|+.|++||+++++.. ...+|.+.|.+++|+|+++++++++.|+.|++||++
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~ 591 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA 591 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999999988877 677899999999999999999999999999999974
No 37
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=2.8e-26 Score=141.03 Aligned_cols=129 Identities=12% Similarity=0.108 Sum_probs=111.5
Q ss_pred CEEEeCCCC-------ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCC
Q psy15612 1 MYLQSVSPG-------RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~-------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~ 71 (131)
|++||+.++ +....+ +|...|.+++|+|++.++++++.|++|++||+.+++. ..+.+|...|.+++|+|++
T Consensus 51 v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~ 130 (343)
T 2xzm_R 51 VMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDN 130 (343)
T ss_dssp EEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSST
T ss_pred EEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCC
Confidence 689998753 334445 8999999999999999999999999999999998875 6678899999999999999
Q ss_pred CEEEEeCCCCeEEEeeCCCCceEEe---cCCCCCeEEEEECCCC----------CEEEEecCCCcEEEEEe
Q psy15612 72 KWFVSTGKDNLLNAWRTPYGASIFQ---SKESSSVLSCDISADD----------KYIVTGSGDKKATVYEV 129 (131)
Q Consensus 72 ~~~~~~~~~~~i~~w~~~~~~~~~~---~~~~~~v~~~~~~~~~----------~~l~~~~~d~~i~vw~~ 129 (131)
+++++++.|+.+++||+........ ..|...+.+++|+|++ .++++++.|+.|++||.
T Consensus 131 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 201 (343)
T 2xzm_R 131 RQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT 201 (343)
T ss_dssp TEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET
T ss_pred CEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC
Confidence 9999999999999999984433322 2688899999999987 78999999999999984
No 38
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=1.2e-26 Score=141.51 Aligned_cols=130 Identities=10% Similarity=0.138 Sum_probs=113.4
Q ss_pred CEEEeCCCC-----ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCE
Q psy15612 1 MYLQSVSPG-----RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~-----~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~ 73 (131)
|++||+... .++..+ +|...|.+++|+|+++++++++.|++|++||+.+++. ..+.+|...|.+++|+|+++.
T Consensus 42 v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 121 (319)
T 3frx_A 42 LISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASM 121 (319)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCE
T ss_pred EEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCE
Confidence 578988642 334455 8999999999999999999999999999999998875 667889999999999999999
Q ss_pred EEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCC------CCEEEEecCCCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISAD------DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d~~i~vw~~~ 130 (131)
+++++.|+.+++||++........+|...+.+++++|. +..+++++.|+.|++||++
T Consensus 122 l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~ 184 (319)
T 3frx_A 122 IISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLN 184 (319)
T ss_dssp EEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETT
T ss_pred EEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECC
Confidence 99999999999999975544477789999999999985 4489999999999999974
No 39
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=4.2e-27 Score=147.52 Aligned_cols=130 Identities=19% Similarity=0.250 Sum_probs=113.7
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++....+ .|...|.+++|+|+++.|++++.|+.|++||+.+++. ..+..|...|.+++|+|+++.+++++
T Consensus 121 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 200 (420)
T 3vl1_A 121 IKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS 200 (420)
T ss_dssp EEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEc
Confidence 589999999888887 8999999999999999999999999999999987764 66788999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-Eec---CCC---------------------CCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQS---KES---------------------SSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~---~~~---------------------~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||+++++.. ... .+. ..+.+++|+|+++++++++.|+.|++||++
T Consensus 201 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 277 (420)
T 3vl1_A 201 LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF 277 (420)
T ss_dssp TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT
T ss_pred CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC
Confidence 9999999999988877 222 233 444555668999999999999999999974
No 40
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.95 E-value=2.1e-26 Score=150.65 Aligned_cols=127 Identities=22% Similarity=0.301 Sum_probs=111.3
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
++|| +++....+ +|...|.+++|+|++. .|++++.|+++++||..+.+. ..+.+|...|.+++|+|+|+++++++
T Consensus 132 ~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s 209 (611)
T 1nr0_A 132 FLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG 209 (611)
T ss_dssp EETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEE
Confidence 3454 45555556 8999999999999987 599999999999999887664 56788999999999999999999999
Q ss_pred CCCeEEEeeCCCCceE-Ee-c------CCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQ-S------KESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~-~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||..+++.. .. . +|.+.|.+++|+|++++|++++.|++|++||++
T Consensus 210 ~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~ 269 (611)
T 1nr0_A 210 GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA 269 (611)
T ss_dssp TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999988877 33 2 689999999999999999999999999999974
No 41
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=3.4e-26 Score=142.43 Aligned_cols=130 Identities=20% Similarity=0.296 Sum_probs=116.7
Q ss_pred CEEEeCCCCceeeee-c---C---CCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCe-EEeec------------
Q psy15612 1 MYLQSVSPGRQLQQH-D---F---SSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALKPDK-YQLHL------------ 57 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~---~---~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~-~~~~~------------ 57 (131)
|++||+++++.+..+ . | ...+.+++|+|++++|++++.+ +.|++||+.+.+. ..+..
T Consensus 209 i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 288 (397)
T 1sq9_A 209 VQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEF 288 (397)
T ss_dssp EEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCB
T ss_pred EEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccccc
Confidence 589999999988877 5 6 8999999999999999999999 9999999988775 55666
Q ss_pred -cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-Eec------CC---------------CCCeEEEEECCCC--
Q psy15612 58 -HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQS------KE---------------SSSVLSCDISADD-- 112 (131)
Q Consensus 58 -~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~------~~---------------~~~v~~~~~~~~~-- 112 (131)
|...+.+++|+|+++++++++.|+.+++||+.+++.+ ... .| ...|.+++|+|++
T Consensus 289 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~ 368 (397)
T 1sq9_A 289 AHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWR 368 (397)
T ss_dssp SBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTS
T ss_pred ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccc
Confidence 8899999999999999999999999999999999887 444 56 8999999999998
Q ss_pred --------CEEEEecCCCcEEEEEee
Q psy15612 113 --------KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 113 --------~~l~~~~~d~~i~vw~~~ 130 (131)
+++++++.|+.|++||+.
T Consensus 369 ~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 369 SGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp BSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred ccccccccceEEEecCCCcEEEEEcC
Confidence 799999999999999985
No 42
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=8.6e-27 Score=144.17 Aligned_cols=130 Identities=15% Similarity=0.136 Sum_probs=106.2
Q ss_pred CEEEeCCCCceeee-----ecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCC-E
Q psy15612 1 MYLQSVSPGRQLQQ-----HDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGK-W 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~-~ 73 (131)
|++||+.+++.... .+|...|.+++|+|++++|++++.|+.|++||+.+++. ..+..|...|.+++|+|++. .
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI 196 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence 68999988765432 26889999999999999999999999999999998875 56788999999999999875 7
Q ss_pred EEEeCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~ 130 (131)
+++++.|+.|++||+++++.. ....+...+.+++|+|+ +.++++++.|+.|++||++
T Consensus 197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~ 257 (357)
T 4g56_B 197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK 257 (357)
T ss_dssp EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS
T ss_pred eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECC
Confidence 889999999999999988876 23346778999999997 5678899999999999975
No 43
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.6e-26 Score=140.55 Aligned_cols=127 Identities=9% Similarity=0.104 Sum_probs=107.4
Q ss_pred EEeCCCCceeeee--cCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCeEEe--eccccceEEEEEccCCCEEEE
Q psy15612 3 LQSVSPGRQLQQH--DFSSQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPDKYQL--HLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 3 iwd~~~~~~~~~~--~~~~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~ 76 (131)
+||..+++.+... +|.+.|.+++|+| +++++++++.|+.+++||+.+++.... ..+...+.+++|+|+++++++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~las 187 (343)
T 3lrv_A 108 ILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLAL 187 (343)
T ss_dssp EEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEE
T ss_pred EeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEE
Confidence 3466677756554 6678899999999 999999999999999999998886433 345557999999999999999
Q ss_pred eCCCCeEEEeeCCCCceE--EecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI--FQSK-ESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.|+.|++||+++++.. .... |.+.|.+++|+|+++++++++ |+.|++||++
T Consensus 188 g~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~ 243 (343)
T 3lrv_A 188 YSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLR 243 (343)
T ss_dssp ECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETT
T ss_pred EcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcC
Confidence 999999999999998876 4445 899999999999999999999 4599999985
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.95 E-value=7.2e-26 Score=138.01 Aligned_cols=130 Identities=15% Similarity=0.161 Sum_probs=119.7
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
|++||+++++.+..+ .|...+.+++|+|+++.+++++.++.+++||+.+++......+...+.+++|+|+++.+++++.
T Consensus 165 v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 165 IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcC
Confidence 579999999988887 6889999999999999999999999999999998887555667888999999999999999999
Q ss_pred CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.+++||+.+++......|...+.+++|+|+++++++++.|+.+++||+.
T Consensus 245 ~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 245 SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp TSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence 999999999988877777899999999999999999999999999999964
No 45
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=2.6e-26 Score=141.33 Aligned_cols=130 Identities=15% Similarity=0.220 Sum_probs=115.7
Q ss_pred CEEEeCCCCceeeee------cCCCCeEEEEECCC----CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc
Q psy15612 1 MYLQSVSPGRQLQQH------DFSSQIFSLGYCPS----GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA 69 (131)
Q Consensus 1 i~iwd~~~~~~~~~~------~~~~~v~~~~~~~~----~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~ 69 (131)
|++||+.+++.+..+ .+...|.+++|+|+ +.+|++++.|+.|++||+.+++. ..+..|...|.+++|+|
T Consensus 46 v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~ 125 (366)
T 3k26_A 46 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHP 125 (366)
T ss_dssp EEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECS
T ss_pred EEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECC
Confidence 589999988776555 25678999999998 67899999999999999998875 55677999999999999
Q ss_pred -CCCEEEEeCCCCeEEEeeCCCCceE-Ee---cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 70 -CGKWFVSTGKDNLLNAWRTPYGASI-FQ---SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 70 -~~~~~~~~~~~~~i~~w~~~~~~~~-~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++.+++++.|+.|++||+.+++.. .. ..|...+.+++|+|+++++++++.|+.|++||++
T Consensus 126 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 191 (366)
T 3k26_A 126 RDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRIN 191 (366)
T ss_dssp SCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESC
T ss_pred CCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECC
Confidence 8999999999999999999998887 33 5799999999999999999999999999999975
No 46
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=3.5e-26 Score=148.18 Aligned_cols=127 Identities=23% Similarity=0.326 Sum_probs=114.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
|++||. +++.+..+ .|...|.+++|+|+++.+++++.|+.+++|+........+..|...+.+++|+|+++++++++.
T Consensus 409 v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 409 VKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp EEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred EEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 578995 46666666 8999999999999999999999999999999876666778899999999999999999999999
Q ss_pred CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
|+.|++||. +++.+ ...+|...|.+++|+|++++|++++.|+.|++||.
T Consensus 488 d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 488 DKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp TSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred CCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 999999996 46655 67789999999999999999999999999999984
No 47
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=4.9e-26 Score=138.90 Aligned_cols=130 Identities=18% Similarity=0.261 Sum_probs=109.9
Q ss_pred CEEEeCCCC---------ceeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC-----------------
Q psy15612 1 MYLQSVSPG---------RQLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD----------------- 51 (131)
Q Consensus 1 i~iwd~~~~---------~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~----------------- 51 (131)
|++||++++ +.+..+ .|...|.+++|+|+ +..+++++.|+.|++||+.+.+
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 589999876 345555 78899999999999 9999999999999999986543
Q ss_pred --------------------------------------------eEEeeccccceEEEEEccCC----CEEEEeCCCCeE
Q psy15612 52 --------------------------------------------KYQLHLHESCVLSLRFAACG----KWFVSTGKDNLL 83 (131)
Q Consensus 52 --------------------------------------------~~~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~i 83 (131)
...+..|...|.+++|+|++ +++++++.|+.|
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 11234578889999999998 899999999999
Q ss_pred EEeeCCCC----------------------------------------------ceE-EecCCCCCeEEEEECCCCCEEE
Q psy15612 84 NAWRTPYG----------------------------------------------ASI-FQSKESSSVLSCDISADDKYIV 116 (131)
Q Consensus 84 ~~w~~~~~----------------------------------------------~~~-~~~~~~~~v~~~~~~~~~~~l~ 116 (131)
++||+.++ +.+ ...+|...|.+++|+|++++|+
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 322 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS 322 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE
Confidence 99998764 222 4456889999999999999999
Q ss_pred EecCCCcEEEEEee
Q psy15612 117 TGSGDKKATVYEVI 130 (131)
Q Consensus 117 ~~~~d~~i~vw~~~ 130 (131)
+++.|+.|++||+.
T Consensus 323 s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 323 SAGDDGKVRLWKAT 336 (351)
T ss_dssp EEETTSCEEEEEEC
T ss_pred EecCCCcEEEEecC
Confidence 99999999999985
No 48
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=5.6e-27 Score=145.26 Aligned_cols=130 Identities=14% Similarity=0.101 Sum_probs=103.5
Q ss_pred CEEEeCCCCc---eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeec-cccceEEEEEccCC
Q psy15612 1 MYLQSVSPGR---QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHL-HESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~-~~~~v~~~~~~~~~ 71 (131)
|++||+++++ ....+ .|...|.+++|+|+++.|++++.|+.+++||+.+.. ...+.. |...+.+++|+|++
T Consensus 79 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 158 (377)
T 3dwl_C 79 AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN 158 (377)
T ss_dssp EEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS
T ss_pred EEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC
Confidence 5899999877 34344 899999999999999999999999999999998775 355666 89999999999999
Q ss_pred CEEEEeCCCCeEEEeeCCC------------------CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 72 KWFVSTGKDNLLNAWRTPY------------------GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 72 ~~~~~~~~~~~i~~w~~~~------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++++++.|+.+++||+.. ++......|...|.+++|+|+++++++++.|+.|++||+.
T Consensus 159 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~ 235 (377)
T 3dwl_C 159 VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPS 235 (377)
T ss_dssp SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEEC
T ss_pred CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 9999999999999999852 3333222788999999999999999999999999999985
No 49
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=7.4e-27 Score=147.53 Aligned_cols=130 Identities=16% Similarity=0.209 Sum_probs=111.6
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCC-EEEE
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGK-WFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~ 76 (131)
|++||++++...... .+...+.+++|+|++++|++|+.|+.|++||+.+.....+..|...|.+++|+|++. .+++
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEE
Confidence 689999876544333 234467899999999999999999999999998777777888999999999999876 6788
Q ss_pred eCCCCeEEEeeCCCCceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.|+.|++||+++++.. ...+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECC
Confidence 999999999999876644 345688999999999999999999999999999974
No 50
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=1.9e-26 Score=145.69 Aligned_cols=130 Identities=9% Similarity=0.014 Sum_probs=109.1
Q ss_pred CEEEeCCCCceeee--e-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeec---cccceEEEEEccCCCE
Q psy15612 1 MYLQSVSPGRQLQQ--H-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~--~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~ 73 (131)
|+|||+.+++.... + +|.+.|.+++|+| ++.+|++++.|++|++||+++.....+.. +...+.+++|+|++++
T Consensus 144 i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (435)
T 4e54_B 144 IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRM 223 (435)
T ss_dssp EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTE
T ss_pred EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCE
Confidence 68999987754433 2 7999999999998 68899999999999999998776544432 3445788999999999
Q ss_pred EEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
+++++.|+.|++||++.........|...|.+++|+|+++ ++++++.|+.|++||++
T Consensus 224 l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~ 281 (435)
T 4e54_B 224 VVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLR 281 (435)
T ss_dssp EEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETT
T ss_pred EEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecc
Confidence 9999999999999997554446678999999999999876 67889999999999975
No 51
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=3.6e-26 Score=139.31 Aligned_cols=128 Identities=12% Similarity=0.108 Sum_probs=98.8
Q ss_pred CEEEeCCCCceeeee-cCC---CCeEEEEECCCCCEE------------EEEeCCCcEEEEeCCCCCeEEe------ecc
Q psy15612 1 MYLQSVSPGRQLQQH-DFS---SQIFSLGYCPSGEWL------------AVGMENSNVEVLHALKPDKYQL------HLH 58 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~---~~v~~~~~~~~~~~l------------~~~~~~~~v~~~~~~~~~~~~~------~~~ 58 (131)
|+|||+++++++..+ ++. ..+.+++|+|+|..+ ++|+.|+++++||..+++.... .+|
T Consensus 205 IkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh 284 (356)
T 2w18_A 205 IVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQ 284 (356)
T ss_dssp EEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTC
T ss_pred EEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCC
Confidence 689999999999988 332 467788999999876 5577899999999998875322 245
Q ss_pred ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeE-EEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVL-SCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
...+.+..+ ++..+++++.|++|++||+.+++.+ .+.+|...+. .++|+|+|++|++++.|++|++||+.
T Consensus 285 ~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 285 AGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp CCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred cceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 444444433 3788999999999999999999988 5556766554 68999999999999999999999973
No 52
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=9.8e-26 Score=140.08 Aligned_cols=130 Identities=15% Similarity=0.156 Sum_probs=112.4
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCC-EEEE
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGK-WFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~ 76 (131)
|++||+++....... .+...|.+++|+|+++.+++++.|+.+++||+.......+..|...|.+++|+|+++ .+++
T Consensus 143 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 143 TTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp EEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEE
T ss_pred EEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEE
Confidence 589999964333332 344789999999999999999999999999996555677888999999999999999 8999
Q ss_pred eCCCCeEEEeeCCC----CceEEecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPY----GASIFQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.|+.+++||+++ +.......|...+.+++|+| +++++++++.|+.|++||++
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETT
T ss_pred EeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECC
Confidence 99999999999987 55555457999999999999 99999999999999999974
No 53
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.2e-25 Score=135.20 Aligned_cols=130 Identities=8% Similarity=0.060 Sum_probs=117.4
Q ss_pred CEEEeCCC-Cceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSP-GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++ ++.+..+ .|...|.+++|+|++..|++++.|+.+++||+.+.+......+...+..+.|+|+++.+++++
T Consensus 199 i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 278 (369)
T 3zwl_B 199 ISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGG 278 (369)
T ss_dssp EEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEE
T ss_pred EEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEee
Confidence 57999998 6777666 788999999999999999999999999999999888755555788899999999999999998
Q ss_pred CCC--------------eEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDN--------------LLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~--------------~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.++ .+++||..+++.. ....|...|.+++|+|+++++++++.|+.|++|++.
T Consensus 279 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 279 GQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp CCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred cCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 887 8999999999888 667799999999999999999999999999999984
No 54
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=3.6e-26 Score=143.28 Aligned_cols=130 Identities=15% Similarity=0.144 Sum_probs=114.1
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
|++||+.+++....+.....+....++|+++.|++++.++.+++||+.+++.... ..|...|.+++|+|+++++++++.
T Consensus 80 v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 159 (420)
T 3vl1_A 80 DFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ 159 (420)
T ss_dssp EEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC
Confidence 5789998877666554445556667899999999999999999999998876444 689999999999999999999999
Q ss_pred CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+.+++||+.+++.. ....|...|.+++|+|+++++++++.|+.+++||++
T Consensus 160 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 160 DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp TSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECC
Confidence 999999999988877 667799999999999999999999999999999974
No 55
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=6.9e-26 Score=141.72 Aligned_cols=130 Identities=10% Similarity=0.213 Sum_probs=113.8
Q ss_pred CEEEeCCCC-------ceeeee-cCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCe-EEe--eccccceEEEEEc
Q psy15612 1 MYLQSVSPG-------RQLQQH-DFSSQIFSLGYCPSG-EWLAVGMENSNVEVLHALKPDK-YQL--HLHESCVLSLRFA 68 (131)
Q Consensus 1 i~iwd~~~~-------~~~~~~-~~~~~v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~-~~~--~~~~~~v~~~~~~ 68 (131)
|++||+.++ +.+..+ +|...|.+++|+|++ ..+++++.|+.|++||+.+++. ..+ ..|...+.+++|+
T Consensus 106 v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 185 (402)
T 2aq5_A 106 VMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWS 185 (402)
T ss_dssp EEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEEC
T ss_pred EEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEEC
Confidence 589999987 455555 799999999999998 6999999999999999998875 455 6789999999999
Q ss_pred cCCCEEEEeCCCCeEEEeeCCCCceE-Ee-cCCCCC-eEEEEECCCCCEEEEe---cCCCcEEEEEee
Q psy15612 69 ACGKWFVSTGKDNLLNAWRTPYGASI-FQ-SKESSS-VLSCDISADDKYIVTG---SGDKKATVYEVI 130 (131)
Q Consensus 69 ~~~~~~~~~~~~~~i~~w~~~~~~~~-~~-~~~~~~-v~~~~~~~~~~~l~~~---~~d~~i~vw~~~ 130 (131)
|+++.+++++.|+.+++||+++++.+ .. ..|.+. +.+++|+|++++++++ +.|+.|++||++
T Consensus 186 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 186 RDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp TTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred CCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 99999999999999999999998887 33 456554 8999999999999998 789999999974
No 56
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=1.4e-25 Score=139.40 Aligned_cols=129 Identities=9% Similarity=0.031 Sum_probs=112.9
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeec---cccceEEEEEccCCCE
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~ 73 (131)
|++||+.+++....+ +|...|.+++|+| ++..+++++.|+.+++||+.+.....+.. +...+.+++|+|+++.
T Consensus 98 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 177 (383)
T 3ei3_B 98 IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQM 177 (383)
T ss_dssp EEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTE
T ss_pred EEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCE
Confidence 589999988777665 5899999999999 78999999999999999999765555544 3478999999999999
Q ss_pred EEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
+++++.|+.+++||+. ++.. ....|...|.+++|+|+++ ++++++.|+.|++||++
T Consensus 178 l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 235 (383)
T 3ei3_B 178 LATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR 235 (383)
T ss_dssp EEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGG
T ss_pred EEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCC
Confidence 9999999999999995 5554 6778999999999999999 89999999999999975
No 57
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=4.5e-25 Score=134.64 Aligned_cols=130 Identities=15% Similarity=0.218 Sum_probs=110.2
Q ss_pred CEEEeCCCCc----eeeee-cCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCC----------eEEeeccccceE
Q psy15612 1 MYLQSVSPGR----QLQQH-DFSSQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPD----------KYQLHLHESCVL 63 (131)
Q Consensus 1 i~iwd~~~~~----~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~----------~~~~~~~~~~v~ 63 (131)
|++||+.++. ....+ +|...|.+++|+| ++.+|++++.|+.|++||+.++. ...+..|...+.
T Consensus 35 i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (351)
T 3f3f_A 35 IKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLY 114 (351)
T ss_dssp EEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEE
T ss_pred EEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCcee
Confidence 5899998763 44444 7999999999999 69999999999999999998753 345677899999
Q ss_pred EEEEccC--CCEEEEeCCCCeEEEeeCCCCce------------------------------------------------
Q psy15612 64 SLRFAAC--GKWFVSTGKDNLLNAWRTPYGAS------------------------------------------------ 93 (131)
Q Consensus 64 ~~~~~~~--~~~~~~~~~~~~i~~w~~~~~~~------------------------------------------------ 93 (131)
+++|+|+ ++++++++.|+.+++||+++++.
T Consensus 115 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~ 194 (351)
T 3f3f_A 115 SVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAI 194 (351)
T ss_dssp EEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEE
T ss_pred EEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcE
Confidence 9999999 99999999999999999875542
Q ss_pred ------------E-EecCCCCCeEEEEECCCC----CEEEEecCCCcEEEEEee
Q psy15612 94 ------------I-FQSKESSSVLSCDISADD----KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 94 ------------~-~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~vw~~~ 130 (131)
. ....|...|.+++|+|++ +++++++.|+.|++||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 195 IYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp EEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred EEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 1 223578889999999998 899999999999999985
No 58
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.1e-27 Score=151.24 Aligned_cols=129 Identities=8% Similarity=0.023 Sum_probs=110.2
Q ss_pred CEEEeCCCCce-eeee-cCCCCeEEE--EECCCC-CEEEEEeCCCcEEEEeCCCCCe-EEeecccc--ceEEEEEccCCC
Q psy15612 1 MYLQSVSPGRQ-LQQH-DFSSQIFSL--GYCPSG-EWLAVGMENSNVEVLHALKPDK-YQLHLHES--CVLSLRFAACGK 72 (131)
Q Consensus 1 i~iwd~~~~~~-~~~~-~~~~~v~~~--~~~~~~-~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~--~v~~~~~~~~~~ 72 (131)
|++||+++++. ...+ .|...|.++ .|+|++ .+|++++.|+++++||+++.+. ..+.+|.. .+.+++|+|+++
T Consensus 289 V~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~ 368 (524)
T 2j04_B 289 VAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIY 368 (524)
T ss_dssp EEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTT
T ss_pred EEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcC
Confidence 68999997643 3334 799999999 578887 8999999999999999987664 34444442 478999999999
Q ss_pred EEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 73 WFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+++++.|+.+++||++++..+ .+.+|.+.|.+++|+|+++++++++.|++|++||+
T Consensus 369 ~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 369 SYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp EEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred eEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 9999999999999999998875 56679999999999999999999999999999986
No 59
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=8.2e-26 Score=147.01 Aligned_cols=129 Identities=9% Similarity=0.066 Sum_probs=114.8
Q ss_pred CEEEeCCCCcee-eee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeec-cccceEEEEEcc-------
Q psy15612 1 MYLQSVSPGRQL-QQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHL-HESCVLSLRFAA------- 69 (131)
Q Consensus 1 i~iwd~~~~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~-~~~~v~~~~~~~------- 69 (131)
|++||+.+++.. ..+ .|...|.+++|+|++++|++++.|+.+++||+.+++. ..+.. |...|.+++|+|
T Consensus 469 i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~ 548 (615)
T 1pgu_A 469 IQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANE 548 (615)
T ss_dssp EEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC-----
T ss_pred EEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccc
Confidence 578999877664 334 7889999999999999999999999999999998876 44555 899999999999
Q ss_pred ---CCCEEEEeCCCCeEEEeeCCCC-ceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 70 ---CGKWFVSTGKDNLLNAWRTPYG-ASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 70 ---~~~~~~~~~~~~~i~~w~~~~~-~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++++++++.|+.|++||+.++ +.+ ...+|...|.+++|+|+++ |++++.|+.|++||+.
T Consensus 549 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 549 EEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp -CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred cccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 9999999999999999999987 455 6677999999999999999 9999999999999985
No 60
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=3.9e-25 Score=153.27 Aligned_cols=130 Identities=15% Similarity=0.244 Sum_probs=120.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc--CCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA--CGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~--~~~~~~~ 76 (131)
|++||+.+++.+..+ +|...|.+++|+|+++++++++.|+.|++||+.+++. ..+..|...+.+++|+| ++..+++
T Consensus 639 i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s 718 (1249)
T 3sfz_A 639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLAT 718 (1249)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEE
Confidence 589999999998888 7999999999999999999999999999999998875 66788999999999999 5568899
Q ss_pred eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.|+.+++||+.+++.. ...+|.+.|.+++|+|+++++++++.|+.|++||+.
T Consensus 719 g~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~ 773 (1249)
T 3sfz_A 719 GSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVR 773 (1249)
T ss_dssp EETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGG
T ss_pred EeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCC
Confidence 999999999999999887 667899999999999999999999999999999974
No 61
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.94 E-value=1.8e-25 Score=137.99 Aligned_cols=129 Identities=15% Similarity=0.175 Sum_probs=114.3
Q ss_pred CEEEeCCCCc--eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCCEE
Q psy15612 1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~ 74 (131)
|++||+++++ .+..+ .|...|.+++|+|+++.+++++.|+.+++||+.+++. ..+..|...+.+++|+|+++++
T Consensus 32 v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 111 (372)
T 1k8k_C 32 VHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKF 111 (372)
T ss_dssp EEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEE
T ss_pred EEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEE
Confidence 5899999886 66666 7999999999999999999999999999999988763 3346688899999999999999
Q ss_pred EEeCCCCeEEEeeCCCCce----E-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 75 VSTGKDNLLNAWRTPYGAS----I-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~~----~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++++.++.+++||+..++. . ....|...+.+++|+|+++++++++.|+.+++||+
T Consensus 112 ~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 112 AVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp EEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred EEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence 9999999999999988763 2 34567899999999999999999999999999995
No 62
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=6.4e-25 Score=135.70 Aligned_cols=130 Identities=6% Similarity=0.058 Sum_probs=106.2
Q ss_pred CEEEeCCCCc----------------eeeee-cCCCCeEEEEECCCCCEEEEEeCCCc-EEEEeCCCCCe-EEee-c-cc
Q psy15612 1 MYLQSVSPGR----------------QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSN-VEVLHALKPDK-YQLH-L-HE 59 (131)
Q Consensus 1 i~iwd~~~~~----------------~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~-v~~~~~~~~~~-~~~~-~-~~ 59 (131)
|++||+++++ .+..+ +|.+.|.+++|+|++++|++++.|++ +++||+.+++. ..+. + |.
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR 240 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 5799998765 14444 89999999999999999999999998 99999998876 4555 4 89
Q ss_pred cceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE---Ee---------------------cCCCCCeEEEEECCCCCEE
Q psy15612 60 SCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI---FQ---------------------SKESSSVLSCDISADDKYI 115 (131)
Q Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~---~~---------------------~~~~~~v~~~~~~~~~~~l 115 (131)
..|.+++|+|+++++++++.|+.+++||+..+... .. .........++|+++++.+
T Consensus 241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l 320 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLV 320 (355)
T ss_dssp SCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEE
T ss_pred CcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEE
Confidence 99999999999999999999999999999765321 10 0112223678999999999
Q ss_pred EEecCCCcEEEEEee
Q psy15612 116 VTGSGDKKATVYEVI 130 (131)
Q Consensus 116 ~~~~~d~~i~vw~~~ 130 (131)
++++.||.+.+|++.
T Consensus 321 ~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 321 VVWPHTRMIETFKVV 335 (355)
T ss_dssp EEETTTTEEEEEEEE
T ss_pred EEEeCCCeEEEEEEE
Confidence 999999999999874
No 63
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.4e-25 Score=137.95 Aligned_cols=128 Identities=18% Similarity=0.234 Sum_probs=106.1
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeec-cccceEEEEEccCCCEEE
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHL-HESCVLSLRFAACGKWFV 75 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~~~ 75 (131)
|++||+++++..... .+...+.+++|+|++.++++|+.|+.|++||+++++. ..+.. |...|.+++|+|++.+++
T Consensus 151 i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~ 230 (343)
T 3lrv_A 151 IGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMV 230 (343)
T ss_dssp EEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEE
T ss_pred EEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEE
Confidence 589999999887665 4556799999999999999999999999999998874 46666 899999999999999999
Q ss_pred EeCCCCeEEEeeCCCCceEE-ecC---CCCCe--EEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612 76 STGKDNLLNAWRTPYGASIF-QSK---ESSSV--LSCDISADDKYIVTGSG-DKKATVYEV 129 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~~-~~~---~~~~v--~~~~~~~~~~~l~~~~~-d~~i~vw~~ 129 (131)
+++ ++.+++||+++++... ... +...+ .+++|+|+++++++++. |+.+++|++
T Consensus 231 s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 231 VEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp EEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEE
Confidence 999 5599999999877652 111 22233 46999999999999888 999999987
No 64
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.94 E-value=7.6e-25 Score=137.07 Aligned_cols=128 Identities=18% Similarity=0.254 Sum_probs=114.3
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++||+.+++....+ .|...|.+++|+|+++.|++++.++.+.+||+.+++. ..+..|...+.++.| +++.++++
T Consensus 115 v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~ 192 (401)
T 4aez_A 115 VYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSG 192 (401)
T ss_dssp EEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEE
T ss_pred EEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEE
Confidence 589999999888776 4788999999999999999999999999999988775 667789999999999 46799999
Q ss_pred CCCCeEEEeeCCCC-ceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 78 GKDNLLNAWRTPYG-ASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 78 ~~~~~i~~w~~~~~-~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+.|+.+++||++.. ... ....|.+.+.+++|+|+++++++++.|+.|++||++
T Consensus 193 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 247 (401)
T 4aez_A 193 SRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDAR 247 (401)
T ss_dssp ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred cCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCC
Confidence 99999999999854 334 667799999999999999999999999999999974
No 65
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.94 E-value=2.9e-25 Score=146.98 Aligned_cols=130 Identities=17% Similarity=0.189 Sum_probs=112.0
Q ss_pred CEEEeCCCCc-----eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCE
Q psy15612 1 MYLQSVSPGR-----QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~~-----~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~ 73 (131)
|++||+.+.. ....+ +|...|.+++|+|++++|++++.|+.|++||+.++.. ..+.+|...|.+++|+|+++.
T Consensus 407 i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 486 (694)
T 3dm0_A 407 IILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQ 486 (694)
T ss_dssp EEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSC
T ss_pred EEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCE
Confidence 6899987532 33344 8999999999999999999999999999999988875 667889999999999999999
Q ss_pred EEEeCCCCeEEEeeCCCCceEEe----cCCCCCeEEEEECCCC--CEEEEecCCCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWRTPYGASIFQ----SKESSSVLSCDISADD--KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~~~----~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~vw~~~ 130 (131)
+++++.|+.|++||......... .+|...|.+++|+|++ ..+++++.|+.|++||++
T Consensus 487 l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~ 549 (694)
T 3dm0_A 487 IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 549 (694)
T ss_dssp EEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT
T ss_pred EEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECC
Confidence 99999999999999875544322 3578889999999986 579999999999999974
No 66
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=9.9e-26 Score=152.75 Aligned_cols=128 Identities=14% Similarity=0.145 Sum_probs=108.7
Q ss_pred CEEEeCCCCceee--ee----------cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-----------------
Q psy15612 1 MYLQSVSPGRQLQ--QH----------DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----------------- 51 (131)
Q Consensus 1 i~iwd~~~~~~~~--~~----------~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----------------- 51 (131)
|++||+.+++... .+ +|...|.+++|+|+++.|++|+.|++|++|++.+++
T Consensus 459 VrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~ 538 (902)
T 2oaj_A 459 VRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNF 538 (902)
T ss_dssp EEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------C
T ss_pred EEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceee
Confidence 6899998874321 11 577899999999999999999999999999987552
Q ss_pred -----------------------------eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEE------e
Q psy15612 52 -----------------------------KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIF------Q 96 (131)
Q Consensus 52 -----------------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~------~ 96 (131)
...+..|...|.+++|+||| ++++++.|+.|++||++++..+. .
T Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~ 617 (902)
T 2oaj_A 539 RRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREI 617 (902)
T ss_dssp CSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGT
T ss_pred eeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHh
Confidence 23456799999999999999 99999999999999998776642 1
Q ss_pred -cCCCCCeEEEEEC-----CCC---CEEEEecCCCcEEEEEe
Q psy15612 97 -SKESSSVLSCDIS-----ADD---KYIVTGSGDKKATVYEV 129 (131)
Q Consensus 97 -~~~~~~v~~~~~~-----~~~---~~l~~~~~d~~i~vw~~ 129 (131)
.+|.+.|.+++|+ ||| ++|++++.|++|++||+
T Consensus 618 ~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 618 SGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp CSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred ccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 2688899999999 885 89999999999999998
No 67
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.94 E-value=1.1e-25 Score=138.21 Aligned_cols=130 Identities=18% Similarity=0.187 Sum_probs=113.0
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECC---CCCEEEEEeCCCcEEEEeCCCCCe-E-----EeeccccceEEEEEccCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCP---SGEWLAVGMENSNVEVLHALKPDK-Y-----QLHLHESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~~~~v~~~~~~~~~~-~-----~~~~~~~~v~~~~~~~~~ 71 (131)
|++||+++++......+...+.+++|+| ++..+++++.++.+++||+.+.+. . ....|...+.+++|+|++
T Consensus 192 i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 271 (357)
T 3i2n_A 192 IKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQN 271 (357)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTE
T ss_pred EEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCC
Confidence 5899999998877778899999999999 999999999999999999976542 2 234789999999999999
Q ss_pred C-EEEEeCCCCeEEEeeCCCCc-------------------eE-EecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612 72 K-WFVSTGKDNLLNAWRTPYGA-------------------SI-FQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV 129 (131)
Q Consensus 72 ~-~~~~~~~~~~i~~w~~~~~~-------------------~~-~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~ 129 (131)
+ ++++++.|+.+++||++++. .+ ....|...|.+++|+|++++++ +++.|+.|++||+
T Consensus 272 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 272 RELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp EEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 8 79999999999999987542 22 4567899999999999999998 7999999999998
Q ss_pred e
Q psy15612 130 I 130 (131)
Q Consensus 130 ~ 130 (131)
.
T Consensus 352 ~ 352 (357)
T 3i2n_A 352 T 352 (357)
T ss_dssp C
T ss_pred C
Confidence 4
No 68
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.3e-25 Score=141.22 Aligned_cols=129 Identities=12% Similarity=0.125 Sum_probs=115.5
Q ss_pred CEEEeCC--CCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-----EeeccccceEEEEEccC
Q psy15612 1 MYLQSVS--PGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-----QLHLHESCVLSLRFAAC 70 (131)
Q Consensus 1 i~iwd~~--~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~ 70 (131)
|++||+. +++.+..+ .+...|.+++|+|+++.|++++.++.+.+|++...... .+..|...|.+++|+|+
T Consensus 127 v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 206 (450)
T 2vdu_B 127 LLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKD 206 (450)
T ss_dssp EEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEEC
T ss_pred EEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCC
Confidence 5899999 88887776 56788999999999999999999999999999776542 56778999999999999
Q ss_pred ---CCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 71 ---GKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 71 ---~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++++++++.|+.|++||+.+++.+ ...+|...|.+++|+ +++++++++.|+.|++||++
T Consensus 207 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~ 270 (450)
T 2vdu_B 207 SDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWK 270 (450)
T ss_dssp TTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETT
T ss_pred CCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECC
Confidence 999999999999999999988877 355799999999999 99999999999999999974
No 69
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.9e-25 Score=137.12 Aligned_cols=129 Identities=12% Similarity=0.210 Sum_probs=117.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++.+..+ .|...|.+++|+|+++.+++++.++.+++||+.+.+. ..+..|...+.++.|+|++ .+++++
T Consensus 229 i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~ 307 (425)
T 1r5m_A 229 IFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCS 307 (425)
T ss_dssp EEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEE
T ss_pred EEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEe
Confidence 579999998888777 7889999999999999999999999999999988764 5667789999999999999 999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.++.+++||+.+++.+ ....+...+.+++|+|+++++++++.|+.|++||+.
T Consensus 308 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 308 MDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp TTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred CCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 9999999999998887 566788999999999999999999999999999974
No 70
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=1.7e-25 Score=149.57 Aligned_cols=130 Identities=12% Similarity=0.193 Sum_probs=118.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++.+..+ .|...|.+++|+|+++.|++++.++.+.+|++.+++. ..+..|...+.+++|+|+++++++++
T Consensus 37 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 116 (814)
T 3mkq_A 37 VEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS 116 (814)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred EEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc
Confidence 589999999988888 7999999999999999999999999999999998875 56778999999999999999999999
Q ss_pred CCCeEEEeeCCCCce-E-EecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGAS-I-FQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~-~-~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||+.++.. . ....|...+.+++|+| +++.+++++.|+.|++||+.
T Consensus 117 ~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~ 171 (814)
T 3mkq_A 117 DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG 171 (814)
T ss_dssp TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 999999999988744 3 6667899999999999 88899999999999999963
No 71
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.7e-25 Score=136.25 Aligned_cols=130 Identities=13% Similarity=0.195 Sum_probs=113.9
Q ss_pred CEEEeCC--CCceeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccC--
Q psy15612 1 MYLQSVS--PGRQLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAAC-- 70 (131)
Q Consensus 1 i~iwd~~--~~~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~-- 70 (131)
|++||+. +++.+..+ .|...|.+++|+|+ ++.|++++.|+.|++||+.+++ ...+..|...+.+++|+|+
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 114 (379)
T 3jrp_A 35 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY 114 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGG
T ss_pred EEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCC
Confidence 5899997 45556566 79999999999987 9999999999999999999875 3456678899999999999
Q ss_pred CCEEEEeCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECC-------------CCCEEEEecCCCcEEEEEee
Q psy15612 71 GKWFVSTGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISA-------------DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 71 ~~~~~~~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.+++++.|+.+++||+.++... ....|...+.+++|+| +++++++++.|+.|++||++
T Consensus 115 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 190 (379)
T 3jrp_A 115 GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 190 (379)
T ss_dssp CSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE
T ss_pred CCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec
Confidence 999999999999999999887433 5567899999999999 69999999999999999985
No 72
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.7e-25 Score=143.27 Aligned_cols=129 Identities=12% Similarity=0.133 Sum_probs=107.4
Q ss_pred CEEEeCCCCcee----eee-cCCCCeEEEEECCC------CCEEEEEeCCCcEEEEeCCCCCe------------EEeec
Q psy15612 1 MYLQSVSPGRQL----QQH-DFSSQIFSLGYCPS------GEWLAVGMENSNVEVLHALKPDK------------YQLHL 57 (131)
Q Consensus 1 i~iwd~~~~~~~----~~~-~~~~~v~~~~~~~~------~~~l~~~~~~~~v~~~~~~~~~~------------~~~~~ 57 (131)
|+|||+.+++.. ..+ .|.+.|..++|+|+ +.+|++++.|++|++||+..... ..+..
T Consensus 185 I~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~ 264 (524)
T 2j04_B 185 IQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL 264 (524)
T ss_dssp EEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC
T ss_pred EEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc
Confidence 579999877642 223 56788999999996 57999999999999999976531 24567
Q ss_pred cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEE--EECCCC-CEEEEecCCCcEEEEEee
Q psy15612 58 HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSC--DISADD-KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 58 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~vw~~~ 130 (131)
|...+.+++|+|+ ..|++++.|+.|++||+++++.. ....|...|.++ +|+|++ ++|++++.|++|++||++
T Consensus 265 h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~ 341 (524)
T 2j04_B 265 ADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK 341 (524)
T ss_dssp TTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG
T ss_pred CCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC
Confidence 8899999999986 47999999999999999977543 467899999999 578887 899999999999999974
No 73
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.1e-25 Score=151.18 Aligned_cols=129 Identities=14% Similarity=0.109 Sum_probs=112.4
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE------------EeeccccceEEEEEc
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY------------QLHLHESCVLSLRFA 68 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~------------~~~~~~~~v~~~~~~ 68 (131)
|++||+++++.+..+.+.+.|.+++|+|+++++++|+.|+.|++||+.+.... ...+|...|.+++|+
T Consensus 81 v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~s 160 (902)
T 2oaj_A 81 VYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWN 160 (902)
T ss_dssp EEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEc
Confidence 68999999999888888889999999999999999999999999999887642 124578899999999
Q ss_pred cC-CCEEEEeCCCCeEEEeeCCCCceE-EecCC------------------CCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 69 AC-GKWFVSTGKDNLLNAWRTPYGASI-FQSKE------------------SSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 69 ~~-~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~------------------~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
|+ +..+++++.|+.+ +||+++++.. ....+ ...|.+++|+|+|++|++++.|+.|++||
T Consensus 161 p~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd 239 (902)
T 2oaj_A 161 PRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWD 239 (902)
T ss_dssp TTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred cCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Confidence 96 5788999999999 9999988876 33222 46799999999999999999999999999
Q ss_pred ee
Q psy15612 129 VI 130 (131)
Q Consensus 129 ~~ 130 (131)
++
T Consensus 240 ~~ 241 (902)
T 2oaj_A 240 AN 241 (902)
T ss_dssp TT
T ss_pred CC
Confidence 73
No 74
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=6.8e-25 Score=134.98 Aligned_cols=124 Identities=17% Similarity=0.284 Sum_probs=110.6
Q ss_pred CCCceeeee-cCCCCeEEEEECCC---CCEEEEEeCCCcEEEEeCCC-CCe--EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 7 SPGRQLQQH-DFSSQIFSLGYCPS---GEWLAVGMENSNVEVLHALK-PDK--YQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 7 ~~~~~~~~~-~~~~~v~~~~~~~~---~~~l~~~~~~~~v~~~~~~~-~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
...+.+..+ +|.+.|.+++|+|+ |++|++++.|+.|++|++.+ +.. ..+..|...|.+++|+|+++++++++.
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC
Confidence 344555555 79999999999999 59999999999999999986 443 567789999999999999999999999
Q ss_pred CCeEEEeeCCCCceEEecCCCCCeEEEEE--CCCCCEEEEecCCCcEEEEEee
Q psy15612 80 DNLLNAWRTPYGASIFQSKESSSVLSCDI--SADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+.+++||+.+++......|...+.+++| +|+++++++++.|+.|++||++
T Consensus 107 dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred CCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence 99999999999988877789999999999 8999999999999999999974
No 75
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=2.5e-24 Score=134.13 Aligned_cols=130 Identities=18% Similarity=0.299 Sum_probs=112.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe--EEe---------------eccccc
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK--YQL---------------HLHESC 61 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~--~~~---------------~~~~~~ 61 (131)
|++||+++++.+..+ .|...|.+++|+|++. .+++++.|+.+++||++.... ..+ ..|...
T Consensus 168 v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (408)
T 4a11_B 168 VQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK 247 (408)
T ss_dssp EEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC
T ss_pred EEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc
Confidence 579999999888777 7899999999999998 588999999999999976541 222 467889
Q ss_pred eEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-----------------------------------------------
Q psy15612 62 VLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI----------------------------------------------- 94 (131)
Q Consensus 62 v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~----------------------------------------------- 94 (131)
+.+++|+|+++++++++.|+.+++||+.+++..
T Consensus 248 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 327 (408)
T 4a11_B 248 VNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI 327 (408)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE
T ss_pred eeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce
Confidence 999999999999999999999999998765422
Q ss_pred -EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 95 -FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 95 -~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
...+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 328 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 328 TMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPS 364 (408)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEEC
T ss_pred eeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCC
Confidence 224578899999999999999999999999999985
No 76
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.2e-24 Score=134.37 Aligned_cols=130 Identities=23% Similarity=0.315 Sum_probs=113.7
Q ss_pred CEEEeCCCCc--eeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEcc---
Q psy15612 1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAA--- 69 (131)
Q Consensus 1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~--- 69 (131)
|++||+++++ .+..+ .|...|.+++|+|+ +..+++++.|+.+++||+.... ...+..|...+.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 5899999886 44455 68899999999999 9999999999999999998764 345678899999999999
Q ss_pred ----------CCCEEEEeCCCCeEEEeeCCCCceE-----EecCCCCCeEEEEECCC---CCEEEEecCCCcEEEEEee
Q psy15612 70 ----------CGKWFVSTGKDNLLNAWRTPYGASI-----FQSKESSSVLSCDISAD---DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 70 ----------~~~~~~~~~~~~~i~~w~~~~~~~~-----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~vw~~~ 130 (131)
++..+++++.|+.|++||+++++.. ....|...|.+++|+|+ ++++++++.|+.|++||++
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 6999999999999999999876532 45568999999999999 8999999999999999975
No 77
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=6.3e-26 Score=138.24 Aligned_cols=130 Identities=19% Similarity=0.236 Sum_probs=109.0
Q ss_pred CEEEeCCCCc--eeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCCe----EEeeccccceEEEEEccC-
Q psy15612 1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPDK----YQLHLHESCVLSLRFAAC- 70 (131)
Q Consensus 1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~v~~~~~~~~- 70 (131)
|++||+++++ ....+ +|...|.+++|+|+ +.+|++++.|+.+++|++..... ..+..|...+.++.|+|+
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC
T ss_pred EEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcccc
Confidence 5899999874 44445 78999999999998 78999999999999999986532 234568888999999997
Q ss_pred ----------------CCEEEEeCCCCeEEEeeCCCCc---eE-EecCCCCCeEEEEECCCC----CEEEEecCCCcEEE
Q psy15612 71 ----------------GKWFVSTGKDNLLNAWRTPYGA---SI-FQSKESSSVLSCDISADD----KYIVTGSGDKKATV 126 (131)
Q Consensus 71 ----------------~~~~~~~~~~~~i~~w~~~~~~---~~-~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~v 126 (131)
++++++++.|+.|++||+..+. .. .+.+|...|.+++|+|++ ++|++++.|++|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 163 VPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp CC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEE
T ss_pred CCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEE
Confidence 4689999999999999997552 33 456799999999999986 78999999999999
Q ss_pred EEee
Q psy15612 127 YEVI 130 (131)
Q Consensus 127 w~~~ 130 (131)
||+.
T Consensus 243 w~~~ 246 (316)
T 3bg1_A 243 WTCD 246 (316)
T ss_dssp EECS
T ss_pred EEcc
Confidence 9863
No 78
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.7e-25 Score=137.94 Aligned_cols=130 Identities=13% Similarity=0.212 Sum_probs=115.2
Q ss_pred CEEEeCCCCceeeeec-C------CCCeEEEEECCCC-CEEEEEeCCC---cEEEEeCCCCC--eEEee-ccccceEEEE
Q psy15612 1 MYLQSVSPGRQLQQHD-F------SSQIFSLGYCPSG-EWLAVGMENS---NVEVLHALKPD--KYQLH-LHESCVLSLR 66 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~-~------~~~v~~~~~~~~~-~~l~~~~~~~---~v~~~~~~~~~--~~~~~-~~~~~v~~~~ 66 (131)
|++||+++++.+..+. + ...+.+++|+|++ ..+++++.++ .|++||+++.. ...+. .|...+.+++
T Consensus 190 v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~ 269 (416)
T 2pm9_A 190 ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLD 269 (416)
T ss_dssp EEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEE
T ss_pred EEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEE
Confidence 5899999998887773 3 6789999999997 6889999998 99999998753 34556 7899999999
Q ss_pred Ecc-CCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612 67 FAA-CGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 67 ~~~-~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~ 130 (131)
|+| +++++++++.|+.+++||+.+++.+ ....|...+.+++|+|++ +++++++.|+.|++||+.
T Consensus 270 ~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 270 WCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp ECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred eCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 999 8999999999999999999999887 666789999999999998 899999999999999974
No 79
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=3.4e-25 Score=134.98 Aligned_cols=115 Identities=20% Similarity=0.207 Sum_probs=100.1
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEcc--CCCEEEEeCCCCeEEEeeCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAA--CGKWFVSTGKDNLLNAWRTPY 90 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~w~~~~ 90 (131)
+|.+.|.+++|+|+|++|++++.|++|++||+.++. ...+.+|...|.+++|+| +++.+++++.|+.+++||+++
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN 90 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence 799999999999999999999999999999998764 355788999999999986 489999999999999999988
Q ss_pred Cc--eE-EecCCCCCeEEEEECCC--CCEEEEecCCCcEEEEEee
Q psy15612 91 GA--SI-FQSKESSSVLSCDISAD--DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 91 ~~--~~-~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw~~~ 130 (131)
++ .. ...+|...|.+++|+|+ +.++++++.|+.|++||++
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~ 135 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYT 135 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEEC
T ss_pred CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecC
Confidence 74 33 45678999999999998 7899999999999999974
No 80
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4e-25 Score=138.22 Aligned_cols=129 Identities=9% Similarity=0.024 Sum_probs=115.1
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++.+..+ .|...+.+++|+|++ .+++++.++.+++||+.+++. ..+..|...+.+++|+|+++++++++
T Consensus 271 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 271 LRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp EEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE
Confidence 589999998888777 688999999999999 999999999999999988775 55677888999999999999999999
Q ss_pred CCCeEEEeeCCCCc--------------------eE-EecCCCC--CeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGA--------------------SI-FQSKESS--SVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~--------------------~~-~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||+.+++ .+ ....+.. .|.+++|+|++++|++++.|+.|++||+.
T Consensus 350 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 350 MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp TTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 99999999998777 55 4555654 99999999999999999999999999974
No 81
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=1.4e-24 Score=133.62 Aligned_cols=92 Identities=12% Similarity=0.202 Sum_probs=82.5
Q ss_pred CEEEeCCC-Ccee-eee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEE--ccCCCEEE
Q psy15612 1 MYLQSVSP-GRQL-QQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRF--AACGKWFV 75 (131)
Q Consensus 1 i~iwd~~~-~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~ 75 (131)
|++||+++ ++.+ ..+ .|...|.+++|+|++++|++++.|+.|++||+.+.+......|...+.+++| +|++++++
T Consensus 66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 145 (368)
T 3mmy_A 66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVM 145 (368)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEE
T ss_pred EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEE
Confidence 58999987 5555 444 7999999999999999999999999999999999888778889999999999 88999999
Q ss_pred EeCCCCeEEEeeCCCCc
Q psy15612 76 STGKDNLLNAWRTPYGA 92 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~ 92 (131)
+++.|+.+++||+++++
T Consensus 146 ~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 146 TGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEETTSEEEEECSSCSS
T ss_pred EccCCCcEEEEECCCCc
Confidence 99999999999987664
No 82
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.94 E-value=4.3e-25 Score=135.88 Aligned_cols=128 Identities=14% Similarity=0.145 Sum_probs=112.9
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeE-Ee---eccccceEEEEEccCCCEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKY-QL---HLHESCVLSLRFAACGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~-~~---~~~~~~v~~~~~~~~~~~~ 74 (131)
|++||+++++.+..+ .|...|.+++|+| ++..+++++.|+.|++||+.+++.. .+ ..|...+.+++|+|+++.+
T Consensus 97 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 176 (366)
T 3k26_A 97 IRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKI 176 (366)
T ss_dssp EEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEE
T ss_pred EEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEE
Confidence 589999999998888 6999999999999 8999999999999999999988753 33 5789999999999999999
Q ss_pred EEeCCCCeEEEeeCCCCceE-Eec----------------------------CCCCCeEEEEECCCCCEEEEecCCCcEE
Q psy15612 75 VSTGKDNLLNAWRTPYGASI-FQS----------------------------KESSSVLSCDISADDKYIVTGSGDKKAT 125 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~~~-~~~----------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 125 (131)
++++.|+.+++||+++++.. ... .|...|.+++|+ ++++++++.|+.|+
T Consensus 177 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~ 254 (366)
T 3k26_A 177 MSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIV 254 (366)
T ss_dssp EEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEE
T ss_pred EEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEE
Confidence 99999999999999876544 111 288999999998 77999999999999
Q ss_pred EEEee
Q psy15612 126 VYEVI 130 (131)
Q Consensus 126 vw~~~ 130 (131)
+||++
T Consensus 255 ~wd~~ 259 (366)
T 3k26_A 255 CWKPG 259 (366)
T ss_dssp EEEES
T ss_pred EEeCC
Confidence 99974
No 83
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.7e-25 Score=139.01 Aligned_cols=130 Identities=14% Similarity=0.216 Sum_probs=113.3
Q ss_pred CEEEeCCCCc---eeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC----C-CeEEeeccccceEEEEEccC-C
Q psy15612 1 MYLQSVSPGR---QLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK----P-DKYQLHLHESCVLSLRFAAC-G 71 (131)
Q Consensus 1 i~iwd~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~----~-~~~~~~~~~~~v~~~~~~~~-~ 71 (131)
|++||+.+++ .+..+.|...|.+++|+|++++|++++.|+.+++|++.. . ....+..|...|.+++|+|+ +
T Consensus 47 v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 126 (416)
T 2pm9_A 47 LELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQD 126 (416)
T ss_dssp CEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSST
T ss_pred EEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCC
Confidence 6899999875 445557889999999999999999999999999999987 2 24567789999999999998 8
Q ss_pred CEEEEeCCCCeEEEeeCCCCc------eE----EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612 72 KWFVSTGKDNLLNAWRTPYGA------SI----FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 72 ~~~~~~~~~~~i~~w~~~~~~------~~----~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~ 130 (131)
+++++++.|+.|++||+.+++ .. ....|...+.+++|+|+ +.++++++.|+.|++||++
T Consensus 127 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 127 NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred CEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 999999999999999999876 33 23468899999999999 7899999999999999974
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.94 E-value=1.5e-24 Score=135.70 Aligned_cols=130 Identities=18% Similarity=0.219 Sum_probs=112.6
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCC-EEEEEe--CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE-WLAVGM--ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~--~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
|++||+++++.+..+ .|...|.+++|+|++. .+++++ .|+.+++||+.+++......+...+.+++|+|+++.+++
T Consensus 241 v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 320 (401)
T 4aez_A 241 VQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMS 320 (401)
T ss_dssp EEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEE
T ss_pred EEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEE
Confidence 589999999888777 7899999999999765 555554 699999999998887555567788999999999999998
Q ss_pred --eCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 --TGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 --~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.++.+++|++.+++.. ....|...|.+++|+|+++++++++.|+.|++||+.
T Consensus 321 ~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 321 THGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp EECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred EeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 558999999999987655 356789999999999999999999999999999974
No 85
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.94 E-value=2.3e-24 Score=133.08 Aligned_cols=130 Identities=14% Similarity=0.107 Sum_probs=112.0
Q ss_pred CEEEeCCCCceeee---ecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEe-eccccceEEEEEccCCC
Q psy15612 1 MYLQSVSPGRQLQQ---HDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQL-HLHESCVLSLRFAACGK 72 (131)
Q Consensus 1 i~iwd~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~-~~~~~~v~~~~~~~~~~ 72 (131)
|++||+++++.... ..|...|.+++|+|+++.+++++.++.+++||+.... ...+ ..|...+.+++|+|+++
T Consensus 76 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 155 (372)
T 1k8k_C 76 AYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV 155 (372)
T ss_dssp EEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS
T ss_pred EEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC
Confidence 58999988875443 3788999999999999999999999999999998766 2223 45788999999999999
Q ss_pred EEEEeCCCCeEEEeeCC------------------CCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 73 WFVSTGKDNLLNAWRTP------------------YGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~------------------~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++++++.|+.+++||+. .++.. ....|...+.+++|+|+++++++++.|+.|++||++
T Consensus 156 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 156 LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 232 (372)
T ss_dssp EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG
T ss_pred EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 99999999999999954 45555 455788999999999999999999999999999974
No 86
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.6e-25 Score=142.90 Aligned_cols=124 Identities=15% Similarity=0.079 Sum_probs=100.2
Q ss_pred EEeCCCCce--eeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecccc-----ceEEEEEccCCCEEE
Q psy15612 3 LQSVSPGRQ--LQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHES-----CVLSLRFAACGKWFV 75 (131)
Q Consensus 3 iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~ 75 (131)
.|++.+++. ...+.+...|.+++|+|+|+.|++++.++.+++|+..+ ....+. |.. .+.+++|||||++++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LA 145 (588)
T 2j04_A 68 KLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIV 145 (588)
T ss_dssp TTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEE
T ss_pred eEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEE
Confidence 455555443 33336678899999999999999999999999999654 333344 554 599999999999999
Q ss_pred EeCCCCeEEEeeCCCCce-------E-Ee----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 76 STGKDNLLNAWRTPYGAS-------I-FQ----SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~-------~-~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++.|+.|++||+.++.. + .. .+|...|.+++|+|+| +++++.|+.+++||+.
T Consensus 146 sgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~ 210 (588)
T 2j04_A 146 VGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVS 210 (588)
T ss_dssp EEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCC
T ss_pred EEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECC
Confidence 999999999999998753 2 22 5577899999999999 7788889999999973
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.93 E-value=9.6e-24 Score=132.83 Aligned_cols=128 Identities=21% Similarity=0.274 Sum_probs=113.9
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
|+|||.++++....+ +|...|.+++|+|+|++|++|+.|+.|++||+.+++. ..+.+|...+.++.+ ++..+++
T Consensus 127 V~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~s 204 (420)
T 4gga_A 127 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSS 204 (420)
T ss_dssp EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEE
T ss_pred EEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEE
Confidence 689999999988765 5677899999999999999999999999999998875 667889998888876 4789999
Q ss_pred eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.|+.+.+||....... ....|...+..+.++|+++++++++.|+.+++|+..
T Consensus 205 gs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 205 GSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 999999999999875554 567899999999999999999999999999999964
No 88
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.93 E-value=2.6e-24 Score=135.37 Aligned_cols=130 Identities=19% Similarity=0.279 Sum_probs=108.6
Q ss_pred CEEEeCCCCcee----eee-cCCCCeEEEEECCCCC-EEEE--EeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCC
Q psy15612 1 MYLQSVSPGRQL----QQH-DFSSQIFSLGYCPSGE-WLAV--GMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGK 72 (131)
Q Consensus 1 i~iwd~~~~~~~----~~~-~~~~~v~~~~~~~~~~-~l~~--~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 72 (131)
|++||..+++.. ... .|...|.+++|+|.+. .+++ |+.|+.|++||+.++.......+...+.++.|+|+++
T Consensus 254 v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~ 333 (420)
T 4gga_A 254 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYK 333 (420)
T ss_dssp EEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTT
T ss_pred ceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCC
Confidence 478998876532 223 7888999999999755 4444 3578999999999988755555667889999999999
Q ss_pred EEEEeC--CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 73 WFVSTG--KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 73 ~~~~~~--~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.+++++ .|+.|++||+.+++.+ .+.+|.+.|.+++|+|+|++|++++.|++|++||+.
T Consensus 334 ~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 334 ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred eEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 887654 6899999999999988 677899999999999999999999999999999973
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.93 E-value=6.6e-25 Score=136.63 Aligned_cols=129 Identities=19% Similarity=0.290 Sum_probs=112.1
Q ss_pred CEEEeCCC------Cceee-----ee--------cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeec---
Q psy15612 1 MYLQSVSP------GRQLQ-----QH--------DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHL--- 57 (131)
Q Consensus 1 i~iwd~~~------~~~~~-----~~--------~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~--- 57 (131)
|++||+++ ++.+. .+ .|...+.+++|+|++ .+++++.++.+++||+.+.+. ..+..
T Consensus 150 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 228 (397)
T 1sq9_A 150 TYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHS 228 (397)
T ss_dssp EEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-
T ss_pred EEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecccc
Confidence 57899887 55554 43 267889999999999 999999999999999998775 55666
Q ss_pred c---ccceEEEEEccCCCEEEEeCCC---CeEEEeeCCCCceE-EecC-------------CCCCeEEEEECCCCCEEEE
Q psy15612 58 H---ESCVLSLRFAACGKWFVSTGKD---NLLNAWRTPYGASI-FQSK-------------ESSSVLSCDISADDKYIVT 117 (131)
Q Consensus 58 ~---~~~v~~~~~~~~~~~~~~~~~~---~~i~~w~~~~~~~~-~~~~-------------~~~~v~~~~~~~~~~~l~~ 117 (131)
| ...+.+++|+|+++++++++.| +.|++||+.+++.+ .... |...+.+++|+|+++++++
T Consensus 229 h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 308 (397)
T 1sq9_A 229 MINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS 308 (397)
T ss_dssp --CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEE
T ss_pred ccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEE
Confidence 7 8899999999999999999999 99999999998877 4555 8899999999999999999
Q ss_pred ecCCCcEEEEEee
Q psy15612 118 GSGDKKATVYEVI 130 (131)
Q Consensus 118 ~~~d~~i~vw~~~ 130 (131)
++.|+.|++||++
T Consensus 309 ~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 309 AGWDGKLRFWDVK 321 (397)
T ss_dssp EETTSEEEEEETT
T ss_pred EeCCCeEEEEEcC
Confidence 9999999999974
No 90
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=7.4e-24 Score=133.75 Aligned_cols=130 Identities=13% Similarity=0.272 Sum_probs=111.3
Q ss_pred CEEEeCCCC---ceeeee-cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCC-
Q psy15612 1 MYLQSVSPG---RQLQQH-DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGK- 72 (131)
Q Consensus 1 i~iwd~~~~---~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~- 72 (131)
|++||++++ +.+..+ .|...|.+++|+|++. .+++++.++.|++||++... ...+..|...+.+++|+|+++
T Consensus 256 i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 256 LMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 335 (430)
T ss_dssp EEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTT
T ss_pred EEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCC
Confidence 589999976 455555 7889999999999987 68899999999999998743 466778999999999999985
Q ss_pred EEEEeCCCCeEEEeeCCC--------------CceE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 73 WFVSTGKDNLLNAWRTPY--------------GASI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~~--------------~~~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
.+++++.|+.|++||+.. .+.+ ...+|...|.+++|+|+++ ++++++.|+.|++|++.
T Consensus 336 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 336 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 688999999999999986 2334 4556889999999999999 88999999999999974
No 91
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.93 E-value=3.5e-24 Score=129.86 Aligned_cols=130 Identities=17% Similarity=0.229 Sum_probs=109.8
Q ss_pred CEEEeCCCCceeee-----ecCCCCeEEEEECCCCCEE---EEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCC
Q psy15612 1 MYLQSVSPGRQLQQ-----HDFSSQIFSLGYCPSGEWL---AVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGK 72 (131)
Q Consensus 1 i~iwd~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l---~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 72 (131)
|++||+++++.... ..+.+.|..+.++|++..+ ++++.++.+++|+...........+...+..+.|+|+++
T Consensus 174 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 253 (318)
T 4ggc_A 174 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYK 253 (318)
T ss_dssp EEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTT
T ss_pred eeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeeccccc
Confidence 58999987764322 2677889999999976643 355678899999999888777777888899999999998
Q ss_pred EEEEe--CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 73 WFVST--GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 73 ~~~~~--~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.++++ +.|+.|++||+++++.+ .+.+|.+.|.+++|+|++++|++++.|++|++||+.
T Consensus 254 ~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 254 ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred ceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 87654 47899999999999988 677899999999999999999999999999999974
No 92
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4.5e-25 Score=139.12 Aligned_cols=129 Identities=10% Similarity=0.097 Sum_probs=109.8
Q ss_pred CEEEeCCCCceeeee-c--CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEee-ccccceEEEEEcc----CC
Q psy15612 1 MYLQSVSPGRQLQQH-D--FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLH-LHESCVLSLRFAA----CG 71 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~--~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~-~~~~~v~~~~~~~----~~ 71 (131)
|++||+++++.+..+ . |...|.+++|+|+++.+++++.|+.|++||+++++. ..+. .|...|.+++|+| ++
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~ 273 (437)
T 3gre_A 194 VIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNS 273 (437)
T ss_dssp EEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTE
T ss_pred EEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCc
Confidence 589999999998887 4 789999999999999999999999999999998775 3343 6778899996654 67
Q ss_pred CEEEEeCCCCeEEEeeCCCCceE-EecC--------------------------CCCCeEEEEECCCCCEEEEecCCCcE
Q psy15612 72 KWFVSTGKDNLLNAWRTPYGASI-FQSK--------------------------ESSSVLSCDISADDKYIVTGSGDKKA 124 (131)
Q Consensus 72 ~~~~~~~~~~~i~~w~~~~~~~~-~~~~--------------------------~~~~v~~~~~~~~~~~l~~~~~d~~i 124 (131)
+++++++.|+.|++||+.+++.. .... |...|.+++|+ +++++++++.|+.|
T Consensus 274 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i 352 (437)
T 3gre_A 274 VIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSI 352 (437)
T ss_dssp EEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEE
T ss_pred cEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeE
Confidence 89999999999999999988866 2221 55668889999 77899999999999
Q ss_pred EEEEee
Q psy15612 125 TVYEVI 130 (131)
Q Consensus 125 ~vw~~~ 130 (131)
++||+.
T Consensus 353 ~~wd~~ 358 (437)
T 3gre_A 353 VMFSLN 358 (437)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 999974
No 93
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2e-23 Score=128.45 Aligned_cols=115 Identities=17% Similarity=0.282 Sum_probs=106.8
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
+|.+.|.+++|+|++++|++++.|+.|++||+.+++. ..+..|...|.+++|+|+++++++++.|+.+++||+.+++..
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 109 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCV 109 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred EeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 8999999999999999999999999999999988775 567789999999999999999999999999999999999988
Q ss_pred EecCCCCCeEEEEECCCCCEEEEecCC-----CcEEEEEee
Q psy15612 95 FQSKESSSVLSCDISADDKYIVTGSGD-----KKATVYEVI 130 (131)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~~ 130 (131)
....+...+.+++|+|+++++++++.+ +.+.+||+.
T Consensus 110 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 110 ATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIE 150 (369)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEE
T ss_pred EEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEec
Confidence 555588999999999999999999988 999999985
No 94
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=9.2e-25 Score=136.57 Aligned_cols=130 Identities=8% Similarity=0.016 Sum_probs=107.6
Q ss_pred CEEEeCCCCceee-----ee-cCCCCeEEEEECC--------CCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEE
Q psy15612 1 MYLQSVSPGRQLQ-----QH-DFSSQIFSLGYCP--------SGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSL 65 (131)
Q Consensus 1 i~iwd~~~~~~~~-----~~-~~~~~v~~~~~~~--------~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~ 65 (131)
|++||+++++... .+ +|.+.|.+++|+| ++++|++++.|+++++||+.+.. ......|...+.++
T Consensus 113 v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v 192 (393)
T 4gq1_A 113 VRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISV 192 (393)
T ss_dssp EEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEE
T ss_pred EEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEE
Confidence 6899998876543 23 7999999999998 78999999999999999997665 46677888999999
Q ss_pred EEccCCC-EEEEeCCCCeEEEeeCCCCceEE--------------------------ecCCCCCeEEEEEC-CCCCEEEE
Q psy15612 66 RFAACGK-WFVSTGKDNLLNAWRTPYGASIF--------------------------QSKESSSVLSCDIS-ADDKYIVT 117 (131)
Q Consensus 66 ~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~~--------------------------~~~~~~~v~~~~~~-~~~~~l~~ 117 (131)
+|+|++. .+++++.|+.+++||+++++... ...+...+.++.|+ |+++.+++
T Consensus 193 ~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s 272 (393)
T 4gq1_A 193 QFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILA 272 (393)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEE
T ss_pred EECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEE
Confidence 9999875 78999999999999998775431 12456778888886 79999999
Q ss_pred ecCCCcEEEEEee
Q psy15612 118 GSGDKKATVYEVI 130 (131)
Q Consensus 118 ~~~d~~i~vw~~~ 130 (131)
++.|+++++||++
T Consensus 273 ~s~d~~i~vwd~~ 285 (393)
T 4gq1_A 273 MCKSGAWLRWNLF 285 (393)
T ss_dssp ECTTSEEEEEEC-
T ss_pred EeCCCCEEEEECc
Confidence 9999999999975
No 95
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.93 E-value=3.2e-23 Score=125.65 Aligned_cols=128 Identities=21% Similarity=0.255 Sum_probs=112.6
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
|+|||+++++++..+ +|...|.+++|+|+++++++|+.|+.|++|++.+++. ..+..|...+.++. +++..+++
T Consensus 47 V~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~--~~~~~l~s 124 (318)
T 4ggc_A 47 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS--WNSYILSS 124 (318)
T ss_dssp EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE--EETTEEEE
T ss_pred EEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEee--cCCCEEEE
Confidence 689999999988766 5778899999999999999999999999999998885 56778887776654 46789999
Q ss_pred eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 77 TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.++.+.+|+...+... ....|...+..+.++++++++++++.|+.|++||++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 125 GSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 999999999998876554 667899999999999999999999999999999974
No 96
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6.8e-24 Score=128.23 Aligned_cols=125 Identities=18% Similarity=0.267 Sum_probs=107.9
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++|| .++....+ .+...+.+++|+|++. +++++.++.+++||+.+++. ..+..|...+.+++|+|++ .++++
T Consensus 167 i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~ 242 (313)
T 3odt_A 167 IKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSC 242 (313)
T ss_dssp EEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEE
T ss_pred EEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEE
Confidence 57898 34445455 3889999999999998 88999999999999998875 5677899999999999999 58899
Q ss_pred CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 78 GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+.|+.+++||+.+++.. ....+...+.+++|+|+++ +++++.|+.|++||+.
T Consensus 243 ~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 243 GEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQE 295 (313)
T ss_dssp ETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESC
T ss_pred ecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCC
Confidence 99999999999999887 6667888999999999998 5568889999999974
No 97
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=1.8e-24 Score=136.40 Aligned_cols=129 Identities=10% Similarity=0.162 Sum_probs=106.3
Q ss_pred CEEEeCCCCc-----------eeeee-cCC------------CCeEEEEECCCC--CEEEEEeCCCcEEEEeCCCCCeE-
Q psy15612 1 MYLQSVSPGR-----------QLQQH-DFS------------SQIFSLGYCPSG--EWLAVGMENSNVEVLHALKPDKY- 53 (131)
Q Consensus 1 i~iwd~~~~~-----------~~~~~-~~~------------~~v~~~~~~~~~--~~l~~~~~~~~v~~~~~~~~~~~- 53 (131)
|++||+.+++ ....+ +|. +.|.+++|+|++ ..+++++.|+.|++|++......
T Consensus 52 v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~ 131 (447)
T 3dw8_B 52 VVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRP 131 (447)
T ss_dssp EEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEE
T ss_pred EEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCc
Confidence 5899998776 34455 777 889999999998 78999999999999998753321
Q ss_pred ---------------------------------------E-eeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc-
Q psy15612 54 ---------------------------------------Q-LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA- 92 (131)
Q Consensus 54 ---------------------------------------~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~- 92 (131)
. ...|...|.+++|+|++++++++ .|+.+++||+.++.
T Consensus 132 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~ 210 (447)
T 3dw8_B 132 EGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDR 210 (447)
T ss_dssp ECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEE
T ss_pred ceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCc
Confidence 1 25688999999999999999998 79999999998433
Q ss_pred eEE--------ecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612 93 SIF--------QSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 93 ~~~--------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~ 130 (131)
... ...|...|.+++|+|++ +++++++.|+.|++||++
T Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 211 SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 332 34688999999999998 999999999999999974
No 98
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.93 E-value=7.7e-24 Score=130.00 Aligned_cols=130 Identities=9% Similarity=0.089 Sum_probs=111.2
Q ss_pred CEEEeCCCCc-eeeee-cCCCCeEEEE------ECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeecccc----ceEEEE
Q psy15612 1 MYLQSVSPGR-QLQQH-DFSSQIFSLG------YCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHES----CVLSLR 66 (131)
Q Consensus 1 i~iwd~~~~~-~~~~~-~~~~~v~~~~------~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~----~v~~~~ 66 (131)
|++||+++++ .+..+ .|...|.++. |+|+++.+++++.|+.+++||+.+.. ...+..+.. .+.++.
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 5899999887 66666 7999999995 57899999999999999999998775 344544433 788888
Q ss_pred ----EccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECC---CCCEEEEecCCCcEEEEEee
Q psy15612 67 ----FAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISA---DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 67 ----~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+|+++++++++.++.+++||+++++......+...+.+++|+| +++++++++.|+.|++||++
T Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp EECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred EEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 78899999999999999999999998887777899999999999 89999999999999999985
No 99
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.93 E-value=6.5e-24 Score=142.05 Aligned_cols=118 Identities=14% Similarity=0.296 Sum_probs=108.7
Q ss_pred eee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCC
Q psy15612 13 QQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY 90 (131)
Q Consensus 13 ~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~ 90 (131)
..+ +|.+.|.+++|+|+++++++++.++.|.+||+.++.. ..+..|...|.+++|+|+++++++++.|+.+++||+.+
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~ 86 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT 86 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 344 7999999999999999999999999999999988775 66778999999999999999999999999999999999
Q ss_pred CceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 91 GASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 91 ~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.. ....|...|.+++|+|+++++++++.|+.+++||+.
T Consensus 87 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 127 (814)
T 3mkq_A 87 GEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127 (814)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGG
T ss_pred CcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECC
Confidence 9887 667799999999999999999999999999999963
No 100
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=3e-24 Score=135.41 Aligned_cols=129 Identities=10% Similarity=0.211 Sum_probs=104.8
Q ss_pred CEEEeCCC-Cceeee-------e-cCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCe-----EEeecccc-----
Q psy15612 1 MYLQSVSP-GRQLQQ-------H-DFSSQIFSLGYCPSG-EWLAVGMENSNVEVLHALKPDK-----YQLHLHES----- 60 (131)
Q Consensus 1 i~iwd~~~-~~~~~~-------~-~~~~~v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~-----~~~~~~~~----- 60 (131)
|++||+++ ++.... + .|...|.+++|+|++ ..+++++.|+.|++||++++.. ..+..|..
T Consensus 200 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 279 (447)
T 3dw8_B 200 INLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRS 279 (447)
T ss_dssp EEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CC
T ss_pred EEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccc
Confidence 58999984 444442 3 788899999999998 9999999999999999987763 55566654
Q ss_pred -------ceEEEEEccCCCEEEEeCCCCeEEEeeCCC-CceE-EecCCCCC---------------eEEEEECCCCCEEE
Q psy15612 61 -------CVLSLRFAACGKWFVSTGKDNLLNAWRTPY-GASI-FQSKESSS---------------VLSCDISADDKYIV 116 (131)
Q Consensus 61 -------~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~-~~~~-~~~~~~~~---------------v~~~~~~~~~~~l~ 116 (131)
.+.+++|+|+++++++++. +.+++||+++ ++.+ ....|... +..++|+|++++++
T Consensus 280 ~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~ 358 (447)
T 3dw8_B 280 FFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVM 358 (447)
T ss_dssp HHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEE
T ss_pred cccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEE
Confidence 8999999999999999998 9999999987 6655 33344321 33499999999999
Q ss_pred EecCCCcEEEEEee
Q psy15612 117 TGSGDKKATVYEVI 130 (131)
Q Consensus 117 ~~~~d~~i~vw~~~ 130 (131)
+++.|+.|++||+.
T Consensus 359 s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 359 TGSYNNFFRMFDRN 372 (447)
T ss_dssp EECSTTEEEEEETT
T ss_pred EeccCCEEEEEEcC
Confidence 99999999999974
No 101
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.92 E-value=1.1e-23 Score=133.59 Aligned_cols=127 Identities=17% Similarity=0.265 Sum_probs=114.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++.+..+ +|...|.+++|+|+++.+++++.|+.|++||+.+++. ..+..|...+.++.|+ ++++++++
T Consensus 292 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s 369 (464)
T 3v7d_B 292 LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAA 369 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEE
T ss_pred EEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEe
Confidence 589999999998888 7899999999999999999999999999999988875 6677899999999997 68999999
Q ss_pred CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||+.+++......+...+..++|+|+++++++++ |+.+++||+.
T Consensus 370 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 370 ADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp TTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT
T ss_pred CCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECC
Confidence 99999999999888776556777888899999999999988 8999999974
No 102
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.92 E-value=2e-23 Score=132.50 Aligned_cols=128 Identities=16% Similarity=0.217 Sum_probs=112.2
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEEC--CCCCEEEEEeCCCcEEEEeCCCCCe------------------------E
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYC--PSGEWLAVGMENSNVEVLHALKPDK------------------------Y 53 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~~~~v~~~~~~~~~~------------------------~ 53 (131)
|++||+++++.+..+ +|...|.+++|+ +++..+++++.|+.+++||+.+... .
T Consensus 185 i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (464)
T 3v7d_B 185 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVG 264 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEE
T ss_pred EEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEE
Confidence 589999999998888 799999999998 5778999999999999999986642 2
Q ss_pred EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 54 QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 54 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
...+|...+.++ +++++.+++++.|+.+++||+.+++.+ ....|...+.+++|+|+++++++++.|+.|++||++
T Consensus 265 ~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 265 VLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 340 (464)
T ss_dssp EECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred EccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 345667777766 678999999999999999999999887 666799999999999999999999999999999974
No 103
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.92 E-value=4.5e-23 Score=128.44 Aligned_cols=130 Identities=12% Similarity=0.185 Sum_probs=114.2
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCC---CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCC-EEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPS---GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGK-WFV 75 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~-~~~ 75 (131)
|++||+++++....+.+...+.++.++|. +..+++++.++.+.+||+.+++. ..+..|...+.+++|+|+++ .++
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~ 203 (408)
T 4a11_B 124 LKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILA 203 (408)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEE
T ss_pred EEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEE
Confidence 58999999999988888899999999985 44899999999999999987774 66778999999999999998 588
Q ss_pred EeCCCCeEEEeeCCCCceE--Ee---------------cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 76 STGKDNLLNAWRTPYGASI--FQ---------------SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~--~~---------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++.|+.+++||++++... .. ..|...+.+++|+|+++++++++.|+.+++||+.
T Consensus 204 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (408)
T 4a11_B 204 TASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSS 275 (408)
T ss_dssp EEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECC
Confidence 9999999999999876532 11 4578899999999999999999999999999974
No 104
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7e-24 Score=133.70 Aligned_cols=130 Identities=12% Similarity=0.153 Sum_probs=105.9
Q ss_pred CEEEeCCC---Cc---eeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC---CCCeEE-ee----------c--c
Q psy15612 1 MYLQSVSP---GR---QLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL---KPDKYQ-LH----------L--H 58 (131)
Q Consensus 1 i~iwd~~~---~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~---~~~~~~-~~----------~--~ 58 (131)
|++||+.+ ++ ....++|...|.+++|+|++..|++++.|+.|++||+. .++... .. . +
T Consensus 88 v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 167 (437)
T 3gre_A 88 IKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGK 167 (437)
T ss_dssp EEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSS
T ss_pred EEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCccc
Confidence 58999876 43 23344789999999999999999999999999999994 443211 11 1 3
Q ss_pred ccceEEEE--EccCCCEEEEeCCCCeEEEeeCCCCceE-EecC--CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 59 ESCVLSLR--FAACGKWFVSTGKDNLLNAWRTPYGASI-FQSK--ESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 59 ~~~v~~~~--~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
...+.++. ++++++.+++++.|+.|++||+++++.+ .... |...|.+++|+|+++++++++.|+.|++||++
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 244 (437)
T 3gre_A 168 NEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR 244 (437)
T ss_dssp CCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred ccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 44566666 5678999999999999999999999887 4444 78999999999999999999999999999975
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7.4e-24 Score=141.50 Aligned_cols=130 Identities=13% Similarity=0.195 Sum_probs=114.0
Q ss_pred CEEEeCC--CCceeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccC--
Q psy15612 1 MYLQSVS--PGRQLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAAC-- 70 (131)
Q Consensus 1 i~iwd~~--~~~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~-- 70 (131)
|++||+. +++.+..+ +|.+.|.+++|+|+ ++.+++++.|+.|++||+.++. ......|...|.+++|+|+
T Consensus 33 I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~ 112 (753)
T 3jro_A 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY 112 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGG
T ss_pred EEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCC
Confidence 5899987 44556566 79999999999988 9999999999999999998875 3556779999999999999
Q ss_pred CCEEEEeCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECC-------------CCCEEEEecCCCcEEEEEee
Q psy15612 71 GKWFVSTGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISA-------------DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 71 ~~~~~~~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~i~vw~~~ 130 (131)
++.+++++.|+.+++||+.++... ....|...+.+++|+| +++++++++.|+.|++||++
T Consensus 113 ~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~ 188 (753)
T 3jro_A 113 GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 188 (753)
T ss_dssp CSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEE
T ss_pred CCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEecc
Confidence 999999999999999999877433 5667899999999999 58999999999999999985
No 106
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.92 E-value=2.3e-23 Score=127.29 Aligned_cols=120 Identities=18% Similarity=0.271 Sum_probs=105.7
Q ss_pred ceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC------eEEeeccccceEEEEEccCCCEEEEeCCCC
Q psy15612 10 RQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD------KYQLHLHESCVLSLRFAACGKWFVSTGKDN 81 (131)
Q Consensus 10 ~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 81 (131)
+...++ +|.+.|.+++|+|+ +++|++|+.|++|++||+...+ ...+.+|...|.+++|+|+++++++++.|+
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 344456 89999999999997 6899999999999999997654 244678999999999999999999999999
Q ss_pred eEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 82 LLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 82 ~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+++|+....... ....+...+....++++++++++++.|+.+++||+
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~ 157 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 157 (340)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence 9999999988777 66667888899999999999999999999999986
No 107
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=3.4e-23 Score=130.74 Aligned_cols=130 Identities=8% Similarity=0.183 Sum_probs=109.3
Q ss_pred CEEEeCCCCce-------eeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEE
Q psy15612 1 MYLQSVSPGRQ-------LQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRF 67 (131)
Q Consensus 1 i~iwd~~~~~~-------~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~ 67 (131)
|++||+.++.. ...+ .|...|.+++|+| ++..+++++.++.|++||+++.. ...+..|...+.+++|
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 285 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSF 285 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEE
T ss_pred EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEe
Confidence 57999987322 2233 7889999999999 67889999999999999998762 3556789999999999
Q ss_pred ccCCC-EEEEeCCCCeEEEeeCCCCc-eE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 68 AACGK-WFVSTGKDNLLNAWRTPYGA-SI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 68 ~~~~~-~~~~~~~~~~i~~w~~~~~~-~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
+|+++ .+++++.|+.|++||+++.. .+ ....|...|.+++|+|+++ ++++++.|+.|++||+.
T Consensus 286 ~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 286 NPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp CSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred CCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 99987 68899999999999999744 33 5667899999999999985 68899999999999974
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.1e-23 Score=133.55 Aligned_cols=111 Identities=11% Similarity=0.006 Sum_probs=97.2
Q ss_pred CeEEEEECCCCCEE-EEEeCCCcEEEEeCC--CCCe-EEee--ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612 20 QIFSLGYCPSGEWL-AVGMENSNVEVLHAL--KPDK-YQLH--LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS 93 (131)
Q Consensus 20 ~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~--~~~~-~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 93 (131)
.|.+++|+|+++.| ++++.|+.|++|++. ++.. ..+. .+...+.+++|+|+++++++++.++.+++|++.+++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPE 183 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccc
Confidence 69999999999996 888899999999998 6654 3343 5678899999999999999999999999999987664
Q ss_pred E-----EecCCCCCeEEEEECCC---CCEEEEecCCCcEEEEEee
Q psy15612 94 I-----FQSKESSSVLSCDISAD---DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 94 ~-----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~vw~~~ 130 (131)
. ...+|...|.+++|+|+ ++++++++.|+.|++||++
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES
T ss_pred ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC
Confidence 3 44568899999999999 9999999999999999985
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.92 E-value=4.3e-24 Score=130.65 Aligned_cols=127 Identities=9% Similarity=0.141 Sum_probs=112.8
Q ss_pred CEEEeCCCCc----eeeeecCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeC-CCCCeEEeec--cccceEEEEEccCCC
Q psy15612 1 MYLQSVSPGR----QLQQHDFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHA-LKPDKYQLHL--HESCVLSLRFAACGK 72 (131)
Q Consensus 1 i~iwd~~~~~----~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~-~~~~~~~~~~--~~~~v~~~~~~~~~~ 72 (131)
|++||+.+++ ......|...|.+++|+|+++ .+++++.++.|++|++ .+.+...+.. |...|.+++|+| ++
T Consensus 35 v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~ 113 (342)
T 1yfq_A 35 LTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DD 113 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TT
T ss_pred EEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CC
Confidence 5899998877 444458999999999999999 9999999999999999 8888877888 999999999999 99
Q ss_pred EEEEeCCCCeEEEeeCCC---------CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 73 WFVSTGKDNLLNAWRTPY---------GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.+++++.|+.+++||+++ ++......+...+.+++|+|++ +++++.|+.|++||++
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~ 178 (342)
T 1yfq_A 114 KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLP 178 (342)
T ss_dssp EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESS
T ss_pred EEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECC
Confidence 999999999999999987 6655444588999999999887 8888999999999975
No 110
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.9e-23 Score=139.54 Aligned_cols=130 Identities=23% Similarity=0.310 Sum_probs=113.7
Q ss_pred CEEEeCCCCc--eeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEcc---
Q psy15612 1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAA--- 69 (131)
Q Consensus 1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~--- 69 (131)
|++||+.+++ .+..+ .|...|.+++|+|+ +..+++++.|+.|++||+.+.. ...+..|...+.++.|+|
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccc
Confidence 5899999886 44444 78999999999999 9999999999999999998763 355678899999999999
Q ss_pred ----------CCCEEEEeCCCCeEEEeeCCCCce----E-EecCCCCCeEEEEECCC---CCEEEEecCCCcEEEEEee
Q psy15612 70 ----------CGKWFVSTGKDNLLNAWRTPYGAS----I-FQSKESSSVLSCDISAD---DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 70 ----------~~~~~~~~~~~~~i~~w~~~~~~~----~-~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~vw~~~ 130 (131)
++..+++++.|+.|++||++++.. . ....|...|.+++|+|+ ++++++++.|+.|++||++
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp --------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred ccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 589999999999999999987642 2 45678999999999999 8999999999999999985
No 111
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=5.3e-23 Score=133.88 Aligned_cols=128 Identities=11% Similarity=0.134 Sum_probs=115.2
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
+++|+..+++.+..+.+...+.+++|+ ++.+++++. ++.+++||+.+... ..+..|...+.+++|+|++++++++
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 506 (615)
T 1pgu_A 429 LLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 506 (615)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEE
T ss_pred eEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEc
Confidence 357888788888888889999999999 889999999 99999999988765 4567788999999999999999999
Q ss_pred CCCCeEEEeeCCCCceE-EecC-CCCCeEEEEECC----------CCCEEEEecCCCcEEEEEee
Q psy15612 78 GKDNLLNAWRTPYGASI-FQSK-ESSSVLSCDISA----------DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~-~~~~-~~~~v~~~~~~~----------~~~~l~~~~~d~~i~vw~~~ 130 (131)
+.|+.+++||+.+++.+ .... |...|.+++|+| +++++++++.|+.|++||+.
T Consensus 507 ~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 571 (615)
T 1pgu_A 507 DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK 571 (615)
T ss_dssp ETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred CCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECC
Confidence 99999999999999888 4444 899999999999 99999999999999999974
No 112
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.91 E-value=9.5e-23 Score=126.47 Aligned_cols=113 Identities=14% Similarity=0.094 Sum_probs=87.1
Q ss_pred CCCCeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGM--ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
+...+..++|+|||+++++++ .|+.|++||+.+.+......|...|.+++|+|||+++++++.++ +.+|+..+++..
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~ 210 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCI 210 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEE
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee-EEEEEeccCcce
Confidence 344588999999999987554 68999999999888655556778899999999999999888554 455544333221
Q ss_pred -----------------------------------------------------EecCCCCCeEEEEECCCCCEEEEecCC
Q psy15612 95 -----------------------------------------------------FQSKESSSVLSCDISADDKYIVTGSGD 121 (131)
Q Consensus 95 -----------------------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~d 121 (131)
....|...|.+++|+|+|++|++++.|
T Consensus 211 ~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D 290 (365)
T 4h5i_A 211 ARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND 290 (365)
T ss_dssp EEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT
T ss_pred eeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC
Confidence 011345668899999999999999999
Q ss_pred CcEEEEEee
Q psy15612 122 KKATVYEVI 130 (131)
Q Consensus 122 ~~i~vw~~~ 130 (131)
++|++||++
T Consensus 291 ~~V~iwd~~ 299 (365)
T 4h5i_A 291 NSIALVKLK 299 (365)
T ss_dssp SCEEEEETT
T ss_pred CEEEEEECC
Confidence 999999974
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.91 E-value=3.5e-23 Score=126.59 Aligned_cols=114 Identities=11% Similarity=-0.053 Sum_probs=105.3
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEEccCCC-EEEEeCCCCeEEEeeC-C
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRFAACGK-WFVSTGKDNLLNAWRT-P 89 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~-~ 89 (131)
.|.+.|.+++|+|++++|++++.|+.|++|++.+.. ......|...+.+++|+|+++ ++++++.|+.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 688999999999999999999999999999998777 566678999999999999999 9999999999999999 8
Q ss_pred CCceEEecC--CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 90 YGASIFQSK--ESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 90 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++...... |...|.+++|+| ++++++++.|+.|++||++
T Consensus 89 ~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~ 130 (342)
T 1yfq_A 89 SPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPR 130 (342)
T ss_dssp SSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHH
T ss_pred CCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccc
Confidence 887777777 999999999999 9999999999999999863
No 114
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.91 E-value=1.5e-22 Score=140.43 Aligned_cols=129 Identities=15% Similarity=0.151 Sum_probs=115.1
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-E------------------------
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-Q------------------------ 54 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~------------------------ 54 (131)
|++||+++++.+..+ +|...|.+++|+|+++.+++++.|+.+++||+.++... .
T Consensus 725 v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 804 (1249)
T 3sfz_A 725 LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCC 804 (1249)
T ss_dssp EEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCC
T ss_pred EEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEE
Confidence 589999999988877 89999999999999999999999999999998755321 0
Q ss_pred -------------------------------eeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCC
Q psy15612 55 -------------------------------LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSS 102 (131)
Q Consensus 55 -------------------------------~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~ 102 (131)
...|...+.+++|+|+++.+++++.++.+++||..++... ...+|...
T Consensus 805 ~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~ 884 (1249)
T 3sfz_A 805 SWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSW 884 (1249)
T ss_dssp CBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSC
T ss_pred EECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccc
Confidence 1156678889999999999999999999999999998887 67789999
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 103 VLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 103 v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
|.+++|+|+++++++++.|+.+++||+
T Consensus 885 v~~v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 885 VHGVMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 999999999999999999999999995
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.91 E-value=3.9e-22 Score=124.10 Aligned_cols=130 Identities=17% Similarity=0.181 Sum_probs=108.8
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEE-EeC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFV-STG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~ 78 (131)
|++||+++++.+..+.+...+.+++|+|+++.+ ++++.++.|++||+.+++......+...+.+++|+|+++.++ +++
T Consensus 14 v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 93 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNM 93 (391)
T ss_dssp EEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET
T ss_pred EEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEEC
Confidence 589999999998888666679999999999977 566689999999999888644444445899999999999875 555
Q ss_pred CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEE-EEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYI-VTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~~ 130 (131)
.++.|++||+.+++......+...+.+++|+|+++.+ ++++.++.|.+||+.
T Consensus 94 ~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 146 (391)
T 1l0q_A 94 ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTV 146 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 6799999999999887555566788999999999977 678889999999963
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.8e-23 Score=132.53 Aligned_cols=123 Identities=11% Similarity=0.087 Sum_probs=99.8
Q ss_pred CEEEeCCCCceeeeecCCC-----CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--------EEe----eccccceE
Q psy15612 1 MYLQSVSPGRQLQQHDFSS-----QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--------YQL----HLHESCVL 63 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--------~~~----~~~~~~v~ 63 (131)
|++||.++ ++..+.|.. .+.+++|||+|++|++|+.|++|++||+.++.. ..+ .+|...|.
T Consensus 109 V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~ 186 (588)
T 2j04_A 109 VSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVT 186 (588)
T ss_dssp EEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEE
T ss_pred EEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEE
Confidence 57899543 444445443 599999999999999999999999999988752 444 45678999
Q ss_pred EEEEccCCCEEEEeCCCCeEEEeeCCCCceE----Ee-cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 64 SLRFAACGKWFVSTGKDNLLNAWRTPYGASI----FQ-SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~----~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++|+|+| +++++.|+.+++||+.+++.. .+ ..|...|.+++|+ ++.+++++ +++|++||+.
T Consensus 187 sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~ 253 (588)
T 2j04_A 187 HIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLK 253 (588)
T ss_dssp EEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETT
T ss_pred EEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECC
Confidence 99999999 778888999999999877642 23 3678899999999 68888887 6899999963
No 117
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=8.5e-22 Score=124.04 Aligned_cols=129 Identities=13% Similarity=0.045 Sum_probs=106.7
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC---cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEE-E
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS---NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFV-S 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~ 76 (131)
|++||+..++......|...+.+++|+|+|+.|++++.++ .|.+||+.+++...+..+...+.+++|+|||+.++ +
T Consensus 161 i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~ 240 (415)
T 2hqs_A 161 LRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFA 240 (415)
T ss_dssp EEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEE
Confidence 5799998555444447889999999999999999998775 89999999988877788888999999999999887 5
Q ss_pred eCCCC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CC--cEEEEEe
Q psy15612 77 TGKDN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DK--KATVYEV 129 (131)
Q Consensus 77 ~~~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~vw~~ 129 (131)
++.++ .|++||+.+++...+..+...+.+++|+|+|+++++++. ++ .|.+||+
T Consensus 241 ~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~ 298 (415)
T 2hqs_A 241 LSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI 298 (415)
T ss_dssp ECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred EecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEEC
Confidence 66554 499999998887777778889999999999999887775 45 4656664
No 118
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=7.5e-24 Score=134.02 Aligned_cols=115 Identities=11% Similarity=0.051 Sum_probs=99.3
Q ss_pred cCCCCeEEEEECCCCCEEE----EEeCCCcEEEEeCCCC--------C----eEEeeccccceEEEEEccC-CCEEEEeC
Q psy15612 16 DFSSQIFSLGYCPSGEWLA----VGMENSNVEVLHALKP--------D----KYQLHLHESCVLSLRFAAC-GKWFVSTG 78 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~----~~~~~~~v~~~~~~~~--------~----~~~~~~~~~~v~~~~~~~~-~~~~~~~~ 78 (131)
.+...|.+++|+|++++|+ +++.|+.|++||+.+. + ...+.+|...|.+++|+|+ +..+++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4567899999999999999 7788999999998643 1 1234568899999999997 88999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||++++... ....|...+.+++|+|+|++|++++.|+.|++||++
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 9999999999988665 455678899999999999999999999999999864
No 119
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.8e-22 Score=121.98 Aligned_cols=125 Identities=14% Similarity=0.163 Sum_probs=106.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeec-cccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHL-HESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++|| .++....+ .|...+.++.+.| ++..+++++.++.+++||... ....+.. +...+.+++|+|++. ++++
T Consensus 126 i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~i~~~~~~~~~~-~~~~ 201 (313)
T 3odt_A 126 AKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK-VIKTFSGIHNDVVRHLAVVDDGH-FISC 201 (313)
T ss_dssp EEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE-EEEEECSSCSSCEEEEEEEETTE-EEEE
T ss_pred EEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc-eEEEEeccCcccEEEEEEcCCCe-EEEc
Confidence 57899 55666555 7889999999988 899999999999999999332 2334444 888999999999998 8899
Q ss_pred CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 78 GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+.++.+++||+++++.+ ....|...+.+++|+|++ .+++++.|+.|++||+.
T Consensus 202 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 202 SNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTT
T ss_pred cCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECC
Confidence 99999999999999887 566799999999999999 58889999999999964
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.90 E-value=1.9e-21 Score=121.00 Aligned_cols=130 Identities=15% Similarity=0.150 Sum_probs=108.8
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEE-EEeC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWF-VSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~ 78 (131)
|++||+++++.+..+.+...+.+++|+|+++.++.+ ..++.|.+||+.+++......+...+.+++|+|+++.+ ++++
T Consensus 56 i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 135 (391)
T 1l0q_A 56 VSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNN 135 (391)
T ss_dssp EEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET
T ss_pred EEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeC
Confidence 589999999998888666699999999999988654 46699999999988865544455678999999999977 6788
Q ss_pred CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEE-EEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYI-VTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~~ 130 (131)
.++.+++||+.+++..........+..++|+|+++++ ++++.++.|.+||++
T Consensus 136 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~ 188 (391)
T 1l0q_A 136 GDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTV 188 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 8999999999998887544455678999999999987 567788999999974
No 121
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=9.3e-22 Score=124.24 Aligned_cols=124 Identities=24% Similarity=0.352 Sum_probs=109.8
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+.+++....+ +|.+.|.+++| +++.+++|+.|+.|++||+.+++. ..+..|...+.+++|+ +..+++++
T Consensus 155 i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s 230 (435)
T 1p22_A 155 IKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCS 230 (435)
T ss_dssp EEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEE
T ss_pred EEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEee
Confidence 589999999998888 79999999998 788999999999999999998875 5677899999999996 45899999
Q ss_pred CCCeEEEeeCCCCceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||+.+++.. ...+|...+.+++| +++++++++.|+.|++||++
T Consensus 231 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~ 284 (435)
T 1p22_A 231 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTS 284 (435)
T ss_dssp TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECC
Confidence 9999999999887653 45678899999999 78899999999999999974
No 122
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=1.4e-21 Score=123.44 Aligned_cols=124 Identities=16% Similarity=0.312 Sum_probs=109.0
Q ss_pred CEEEeCCCCcee---eee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEE
Q psy15612 1 MYLQSVSPGRQL---QQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFV 75 (131)
Q Consensus 1 i~iwd~~~~~~~---~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~ 75 (131)
|++||+++++.. ..+ +|...|.++++ +++.+++++.|+.+++||+.+++. ..+..|...+.++.+ +++.++
T Consensus 235 i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 310 (435)
T 1p22_A 235 IAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVV 310 (435)
T ss_dssp EEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEE
T ss_pred EEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEE
Confidence 579999887655 333 78899999999 788999999999999999998875 567789999999988 478999
Q ss_pred EeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 76 STGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++.|+.|++||+++++.+ ....|...+.+++| +++++++++.|+.|++||++
T Consensus 311 ~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 311 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHH
T ss_pred EEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECC
Confidence 9999999999999999888 66779999999999 78899999999999999973
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.90 E-value=7.4e-22 Score=120.52 Aligned_cols=128 Identities=11% Similarity=0.105 Sum_probs=92.2
Q ss_pred CEEEeC-CCCceeeee-cCCCCeEEEEECC---CCCEEEEEeCCCcEEEEeCCCCCe-EEeeccc---cceEEEEEccCC
Q psy15612 1 MYLQSV-SPGRQLQQH-DFSSQIFSLGYCP---SGEWLAVGMENSNVEVLHALKPDK-YQLHLHE---SCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~-~~~~~~~~~-~~~~~v~~~~~~~---~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~---~~v~~~~~~~~~ 71 (131)
|++|++ ++++.+..+ .|...+..++|+| ++..|++++.|++|++||+.++++ ..+..|. ..+.+++|+|+|
T Consensus 159 V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG 238 (356)
T 2w18_A 159 VEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMG 238 (356)
T ss_dssp EEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETT
T ss_pred EEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCC
Confidence 456666 335555544 5666666666666 567889999999999999999885 5565443 367788999999
Q ss_pred CEE------------EEeCCCCeEEEeeCCCCceEE-e-----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 72 KWF------------VSTGKDNLLNAWRTPYGASIF-Q-----SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 72 ~~~------------~~~~~~~~i~~w~~~~~~~~~-~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+.+ ++++.|+++++||..+++.+. . .+|.....+.++ ++.++++++.|++|++||+.
T Consensus 239 ~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~ 313 (356)
T 2w18_A 239 LLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLL 313 (356)
T ss_dssp EEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETT
T ss_pred CEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECC
Confidence 987 457788999999999998762 1 244444544444 37889999999999999974
No 124
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.90 E-value=1.9e-21 Score=123.00 Aligned_cols=124 Identities=19% Similarity=0.260 Sum_probs=108.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+.+++.+..+ +|.+.|.+++|+ +..+++++.|+.|++||+.+++. ..+..|...+.++.|+ ++.+++++
T Consensus 141 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s 216 (445)
T 2ovr_B 141 LKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGS 216 (445)
T ss_dssp EEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEe
Confidence 589999999988887 799999999996 66999999999999999988775 5667888999999985 66799999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||+.+++.. ....|...+.++++ +++++++++.|+.|++||++
T Consensus 217 ~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~ 267 (445)
T 2ovr_B 217 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPE 267 (445)
T ss_dssp TTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGG
T ss_pred CCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECC
Confidence 9999999999988877 66678899999998 67889999999999999864
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=4.8e-21 Score=120.64 Aligned_cols=129 Identities=17% Similarity=0.143 Sum_probs=106.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEE-EEeCCCc--EEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLA-VGMENSN--VEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~--v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
|++||+++++......+...+.+++|+|+|+.|+ +++.++. |.+||+.+++...+..+...+.+++|+|||+.++.+
T Consensus 205 i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 205 LVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp EEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEE
Confidence 5799999998876667888999999999999887 5555544 999999988887788888889999999999988877
Q ss_pred CC-CC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC---CcEEEEEe
Q psy15612 78 GK-DN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD---KKATVYEV 129 (131)
Q Consensus 78 ~~-~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vw~~ 129 (131)
+. ++ .+++||+.+++......+...+.+++|+|+|+++++++.+ ..|.+||+
T Consensus 285 s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 285 SDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp ECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred ECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 65 44 6788899888766555567788999999999999877653 57999986
No 126
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.89 E-value=4.1e-21 Score=121.54 Aligned_cols=124 Identities=17% Similarity=0.242 Sum_probs=107.5
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++||+++++.+..+ +|...|.++.++ +..+++++.|+.+++||+.+++. ..+..|...+.++.| +++.+++++
T Consensus 181 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 256 (445)
T 2ovr_B 181 LKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGA 256 (445)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEE
T ss_pred EEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEc
Confidence 589999999888877 788999999984 66799999999999999988775 566788889999988 688899999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.|+.+++||+.+++.+ ....|...+.+++| +++++++++.|+.|++||++
T Consensus 257 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~ 307 (445)
T 2ovr_B 257 YDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE 307 (445)
T ss_dssp TTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC
Confidence 9999999999988877 56678889999998 78889999999999999974
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.89 E-value=8.3e-21 Score=119.47 Aligned_cols=130 Identities=12% Similarity=0.059 Sum_probs=109.0
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
|++||+++++.+..+.+...+..++|+|+++.+ ++++.++.+.+||+.+++......+...+.+++|+|+++.+++++.
T Consensus 285 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 285 LGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp EEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEC
T ss_pred EEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEec
Confidence 469999999888877777789999999999755 5668899999999998876554457778999999999998887765
Q ss_pred ---------------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEee
Q psy15612 80 ---------------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEVI 130 (131)
Q Consensus 80 ---------------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~~ 130 (131)
|+.+++||..+++..........+.+++|+|+++++++++. |+.+++|++.
T Consensus 365 ~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 365 GPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp CCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred CCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 46999999999988744445678999999999999887764 9999999984
No 128
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.89 E-value=1.2e-22 Score=127.05 Aligned_cols=105 Identities=16% Similarity=0.186 Sum_probs=90.7
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCCeE------EeeccccceEEEEEcc--------CCCEEEEeCCCCeEEEeeCCCC
Q psy15612 26 YCPSGEWLAVGMENSNVEVLHALKPDKY------QLHLHESCVLSLRFAA--------CGKWFVSTGKDNLLNAWRTPYG 91 (131)
Q Consensus 26 ~~~~~~~l~~~~~~~~v~~~~~~~~~~~------~~~~~~~~v~~~~~~~--------~~~~~~~~~~~~~i~~w~~~~~ 91 (131)
+++++..+++++.|+++++||..++... .+.+|...|.+++|+| |+++|++++.|+++++||+.++
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 3445667999999999999999887642 2457999999999998 8899999999999999999887
Q ss_pred ceE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612 92 ASI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI 130 (131)
Q Consensus 92 ~~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~ 130 (131)
... ....+...+.+++|+|++. ++++++.|++|++||++
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~ 217 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWT 217 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECC
Confidence 766 6777899999999999874 78999999999999974
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.88 E-value=5.3e-21 Score=120.36 Aligned_cols=130 Identities=12% Similarity=0.070 Sum_probs=110.8
Q ss_pred CEEEeCCCCceeee-----e-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCE
Q psy15612 1 MYLQSVSPGRQLQQ-----H-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~-----~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~ 73 (131)
|++||+++++.... + .|...+.+++|+|+++.+++++.++.+++||+.+++. ..+..|...+.+++|+|+++.
T Consensus 146 i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (433)
T 3bws_A 146 MDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDL 225 (433)
T ss_dssp EEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTE
T ss_pred EEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCE
Confidence 57999999988763 2 5777899999999999999999999999999988775 556678889999999999998
Q ss_pred EE-EeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEec--------CCCcEEEEEee
Q psy15612 74 FV-STGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGS--------GDKKATVYEVI 130 (131)
Q Consensus 74 ~~-~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~vw~~~ 130 (131)
++ +++.++.+++||+.+++..........+.+++|+|+++++++++ .|+.|++||++
T Consensus 226 l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~ 291 (433)
T 3bws_A 226 VYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD 291 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred EEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence 75 55579999999999988875555566799999999999988877 47899999963
No 130
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=8.2e-21 Score=120.21 Aligned_cols=129 Identities=12% Similarity=0.117 Sum_probs=99.8
Q ss_pred CEEEeCCCC--------ce---eeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEE
Q psy15612 1 MYLQSVSPG--------RQ---LQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLR 66 (131)
Q Consensus 1 i~iwd~~~~--------~~---~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~ 66 (131)
|++||++++ +. ...+ +|...|.+++|+|+ +..+++++.|++|++||++++.. .....|...+.+++
T Consensus 120 v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~ 199 (434)
T 2oit_A 120 IAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVC 199 (434)
T ss_dssp EEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEE
T ss_pred EEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEE
Confidence 578998654 22 2333 68899999999998 88999999999999999988754 34456788999999
Q ss_pred EccCCCEEEEeCCCCeEEEeeCCCCceE-EecC-------CCCCeEEEEECCCCCEEEE-ecCCC------cEEEEEee
Q psy15612 67 FAACGKWFVSTGKDNLLNAWRTPYGASI-FQSK-------ESSSVLSCDISADDKYIVT-GSGDK------KATVYEVI 130 (131)
Q Consensus 67 ~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~-------~~~~v~~~~~~~~~~~l~~-~~~d~------~i~vw~~~ 130 (131)
|+|+|+++++++.|+.+++||.+ ++.. .... |...+.+++|++++.++++ ...+| .+++|+++
T Consensus 200 wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 200 WSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp ECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred EcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEec
Confidence 99999999999999999999998 4443 2221 2237899999998887754 33333 38899874
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.84 E-value=7e-19 Score=105.26 Aligned_cols=128 Identities=12% Similarity=0.135 Sum_probs=99.6
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC-CCeEEee-cc-ccceEEEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK-PDKYQLH-LH-ESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~-~~~~~~~-~~-~~~v~~~~~~~~~~~~~~~ 77 (131)
|++||+.+++......+...+.+++|+|+++.+++++ ++.+.+||+.+ ++...+. .+ ...+.+++|+|+++.++++
T Consensus 24 i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 102 (297)
T 2ojh_A 24 IEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAIS 102 (297)
T ss_dssp EEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEE
T ss_pred EEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEE
Confidence 5799999988887678889999999999999999886 67999999998 7764443 33 3678899999999999988
Q ss_pred CC--C--CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEee
Q psy15612 78 GK--D--NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEVI 130 (131)
Q Consensus 78 ~~--~--~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~~ 130 (131)
+. + ..+..++..+++..... ....+..++|+|++++++ +++.++.+++|++.
T Consensus 103 ~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 103 DKVEFGKSAIYLLPSTGGTPRLMT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp ECTTTSSCEEEEEETTCCCCEECC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred EeCCCCcceEEEEECCCCceEEee-cCCCccceEECCCCCEEEEEECCCCceEEEEEE
Confidence 73 3 34555565555544333 333488999999999887 67778999999863
No 132
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.82 E-value=8.7e-20 Score=118.88 Aligned_cols=126 Identities=12% Similarity=-0.027 Sum_probs=104.6
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC----CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN----SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
.+||+++++......+.. .++.|+|||+.+++++.+ ..|.+||+.+++...+..+...+..++|+|||+.++++
T Consensus 135 ~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~ 212 (582)
T 3o4h_A 135 ALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGL 212 (582)
T ss_dssp EEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEE
T ss_pred eEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEc
Confidence 478998887766654444 789999999999987766 67999999998888888888889999999999999988
Q ss_pred CCCC--eEEEeeCCCCceEEecCCCCCeEEEE--------ECCCCCEEEEecCCCcEEEEEe
Q psy15612 78 GKDN--LLNAWRTPYGASIFQSKESSSVLSCD--------ISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 78 ~~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
..++ .|++||+.+++......+...+..++ |+|+|.++++++.++++++|++
T Consensus 213 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 213 ETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp ECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred cCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 7788 89999999888774444555566666 9999988888999999999974
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.81 E-value=2.4e-17 Score=100.57 Aligned_cols=128 Identities=8% Similarity=0.019 Sum_probs=97.9
Q ss_pred CEEEeCCCCceeeeec-CCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCe-E-EeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQHD-FSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPDK-Y-QLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~-~-~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
|++||.++++.+..+. +...+ .++|+|+++.+++++. ++.+.+||+.+++. . .+..+.....+++|+|+|+++++
T Consensus 22 v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 100 (331)
T 3u4y_A 22 ISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVT 100 (331)
T ss_dssp EEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEE
T ss_pred EEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEE
Confidence 5799999999887763 34445 9999999997766655 88999999988874 3 34444444444999999999985
Q ss_pred eCCCC---eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe-cCCCc-EEEEEe
Q psy15612 77 TGKDN---LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG-SGDKK-ATVYEV 129 (131)
Q Consensus 77 ~~~~~---~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i~vw~~ 129 (131)
+..++ .+.+||+.+++..........+..++|+|+|++++++ ..++. +.+|++
T Consensus 101 ~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 101 VTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp CCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred ecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 55553 8999999998887555556677999999999866544 55578 999986
No 134
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.80 E-value=9.1e-19 Score=116.16 Aligned_cols=128 Identities=12% Similarity=0.171 Sum_probs=101.0
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC-----CCeEEeec-cccc-------------
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK-----PDKYQLHL-HESC------------- 61 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~-----~~~~~~~~-~~~~------------- 61 (131)
|++||+.+++......+...+..++|+|||+.|+++ .++.|.+|++.+ ++...+.. +...
T Consensus 103 i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~ 181 (706)
T 2z3z_A 103 LVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFG 181 (706)
T ss_dssp EEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTT
T ss_pred EEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcC
Confidence 579999988877666777788899999999999885 678999999988 76544322 2221
Q ss_pred -eEEEEEccCCCEEEEeC---------------------------------CCCeEEEeeCCCCceEEec---CCCCCeE
Q psy15612 62 -VLSLRFAACGKWFVSTG---------------------------------KDNLLNAWRTPYGASIFQS---KESSSVL 104 (131)
Q Consensus 62 -v~~~~~~~~~~~~~~~~---------------------------------~~~~i~~w~~~~~~~~~~~---~~~~~v~ 104 (131)
+.++.|+|||++|++++ .+..+.+||+.+++..... .+...+.
T Consensus 182 ~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 261 (706)
T 2z3z_A 182 IEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT 261 (706)
T ss_dssp CCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE
T ss_pred CCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe
Confidence 47899999999999886 3467999999988766322 4567789
Q ss_pred EEEECCCCCEEEEecCCC-----cEEEEEe
Q psy15612 105 SCDISADDKYIVTGSGDK-----KATVYEV 129 (131)
Q Consensus 105 ~~~~~~~~~~l~~~~~d~-----~i~vw~~ 129 (131)
+++|+|+|+++++++.++ .+.+||+
T Consensus 262 ~~~~spdg~~l~~~~~~~~~~~~~v~~~d~ 291 (706)
T 2z3z_A 262 NLSWSPDENILYVAEVNRAQNECKVNAYDA 291 (706)
T ss_dssp EEEECTTSSEEEEEEECTTSCEEEEEEEET
T ss_pred eEEEECCCCEEEEEEeCCCCCeeEEEEEEC
Confidence 999999999998876665 7888885
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.80 E-value=1.2e-18 Score=115.99 Aligned_cols=120 Identities=13% Similarity=0.119 Sum_probs=95.5
Q ss_pred CEEEeCCCCceeeeec-CC------------------------CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC---Ce
Q psy15612 1 MYLQSVSPGRQLQQHD-FS------------------------SQIFSLGYCPSGEWLAVGMENSNVEVLHALKP---DK 52 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~-~~------------------------~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~---~~ 52 (131)
|++||+.+++....+. +. ..+..++|+|||+.|++++. +.+.+||+.++ ..
T Consensus 66 i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~ 144 (741)
T 2ecf_A 66 LWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAV 144 (741)
T ss_dssp EEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSC
T ss_pred EEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceE
Confidence 5789999988776662 22 23788999999999999886 89999999988 66
Q ss_pred EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC-CCCC----------------eEEEEECCCCCEE
Q psy15612 53 YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSS----------------VLSCDISADDKYI 115 (131)
Q Consensus 53 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~-~~~~----------------v~~~~~~~~~~~l 115 (131)
..+..+...+..++|+|||++++.++ ++.|++||+.+++...... +... +..++|+|+|++|
T Consensus 145 ~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l 223 (741)
T 2ecf_A 145 RQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAI 223 (741)
T ss_dssp CBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCE
T ss_pred EEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEE
Confidence 67777778899999999999998887 5689999999887763332 2221 4779999999999
Q ss_pred EEecCCC
Q psy15612 116 VTGSGDK 122 (131)
Q Consensus 116 ~~~~~d~ 122 (131)
++++.|+
T Consensus 224 ~~~~~d~ 230 (741)
T 2ecf_A 224 AYARIDE 230 (741)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 8876654
No 136
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=7e-18 Score=116.17 Aligned_cols=126 Identities=10% Similarity=0.092 Sum_probs=106.1
Q ss_pred EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCCC-
Q psy15612 3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGKD- 80 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~- 80 (131)
+||+.+++......+...+..++|+|+|+.|++++.++.+.+||+.+++...+. .|...+..++|+|||++++.++.+
T Consensus 363 ~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~ 442 (1045)
T 1k32_A 363 IYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLK 442 (1045)
T ss_dssp EEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEEC
T ss_pred EEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCc
Confidence 678887776554577788999999999999999999999999999988875544 788888999999999999887654
Q ss_pred ---------CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 81 ---------NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 81 ---------~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+.+++||+.+++...+..+...+..++|+|+|+++++++.++...+|+
T Consensus 443 ~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 443 HGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp SSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred cccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcc
Confidence 389999999888556677788889999999999999888776666665
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.79 E-value=1.2e-18 Score=115.68 Aligned_cols=120 Identities=10% Similarity=0.001 Sum_probs=92.7
Q ss_pred CEEEeCCCCceeeeec-CCC---CeEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCCeEEeec---cccceEE
Q psy15612 1 MYLQSVSPGRQLQQHD-FSS---QIFSLGYCPSGEWLAVGMEN---------SNVEVLHALKPDKYQLHL---HESCVLS 64 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~-~~~---~v~~~~~~~~~~~l~~~~~~---------~~v~~~~~~~~~~~~~~~---~~~~v~~ 64 (131)
|++||+.+++....+. +.. .+.+++|+|||+.|++++.+ +.+.+||+.+++...+.. +...+..
T Consensus 39 i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~ 118 (723)
T 1xfd_A 39 VRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQY 118 (723)
T ss_dssp EEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSB
T ss_pred EEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccc
Confidence 5799999998877773 333 48999999999999998764 678899999887654443 3334788
Q ss_pred EEEccCCCEEEEeCCCCeEEEeeCCCCceEEe-cCCCC------------------CeEEEEECCCCCEEEEecCC
Q psy15612 65 LRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESS------------------SVLSCDISADDKYIVTGSGD 121 (131)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~-~~~~~------------------~v~~~~~~~~~~~l~~~~~d 121 (131)
++|||||+.++.++. +.|++||..+++.... ..+.. .+..++|+|+|++|++++.+
T Consensus 119 ~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 119 AGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp CCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred cEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 999999999998875 7899999998876632 22222 23789999999999887644
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.79 E-value=5.5e-17 Score=105.34 Aligned_cols=129 Identities=12% Similarity=0.031 Sum_probs=103.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC--CCCCeEEeeccccceEEEEEcc----CCCEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHA--LKPDKYQLHLHESCVLSLRFAA----CGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~--~~~~~~~~~~~~~~v~~~~~~~----~~~~~ 74 (131)
|.+||..+++++..+.....+..++|+|+|+++++++.++.|.+||+ .+.++.....+...+..++|+| ||+++
T Consensus 161 V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l 240 (543)
T 1nir_A 161 IALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYT 240 (543)
T ss_dssp EEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEE
T ss_pred EEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEE
Confidence 57899999999988853334889999999999999999999999999 6666533233556789999999 99999
Q ss_pred EEeCC-CCeEEEeeCCCCceEE-ecC----------C-CCCeEEEEECCCCCE-EEEecCCCcEEEEEe
Q psy15612 75 VSTGK-DNLLNAWRTPYGASIF-QSK----------E-SSSVLSCDISADDKY-IVTGSGDKKATVYEV 129 (131)
Q Consensus 75 ~~~~~-~~~i~~w~~~~~~~~~-~~~----------~-~~~v~~~~~~~~~~~-l~~~~~d~~i~vw~~ 129 (131)
++++. ++.+.+||..+++.+. ... | ...+..+.++|+++. +++...+++|.+||+
T Consensus 241 ~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~ 309 (543)
T 1nir_A 241 IAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY 309 (543)
T ss_dssp EEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEEC
T ss_pred EEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEe
Confidence 88874 8999999999988872 221 1 237889999997765 466677899999986
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.79 E-value=8.5e-18 Score=102.44 Aligned_cols=128 Identities=5% Similarity=-0.008 Sum_probs=99.6
Q ss_pred CEEEeCCCCceeeeecCCC---CeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCeEE-eec-c----ccceEEEEEccC
Q psy15612 1 MYLQSVSPGRQLQQHDFSS---QIFSLGYCPSGEWLA-VGMENSNVEVLHALKPDKYQ-LHL-H----ESCVLSLRFAAC 70 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~~~-~~~-~----~~~v~~~~~~~~ 70 (131)
|++||+.+++.+..+.... .+..++|+|+++.++ +...++.|.+||+.+++... +.. + ...+..++|+|+
T Consensus 13 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 92 (337)
T 1pby_B 13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPD 92 (337)
T ss_dssp EEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTT
T ss_pred EEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCC
Confidence 5789999999888775444 588999999998765 45557899999998887533 322 1 125778999999
Q ss_pred CCEEEEeC------------CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 71 GKWFVSTG------------KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 71 ~~~~~~~~------------~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
|+.+++++ .++.+.+||..+++..........+..++|+|++++++++ ++.+.+||+.
T Consensus 93 g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~ 162 (337)
T 1pby_B 93 GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPE 162 (337)
T ss_dssp SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETT
T ss_pred CCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECC
Confidence 99888875 5789999999988877443445667889999999988877 5789999863
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.78 E-value=5.6e-18 Score=103.46 Aligned_cols=129 Identities=14% Similarity=0.169 Sum_probs=97.0
Q ss_pred CEEEeCC-CC--ceeeeecCCCCeEEEEECCCCCEEEEEeCC-CcEEEEeCC--CCCeE---EeeccccceEEEEEccCC
Q psy15612 1 MYLQSVS-PG--RQLQQHDFSSQIFSLGYCPSGEWLAVGMEN-SNVEVLHAL--KPDKY---QLHLHESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~v~~~~~~--~~~~~---~~~~~~~~v~~~~~~~~~ 71 (131)
|++||+. ++ +.+..+.+...+..++|+|+++.+++++.+ +.+.+|++. ++... .+.. ...+..++|+|++
T Consensus 17 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg 95 (343)
T 1ri6_A 17 IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL-PGSLTHISTDHQG 95 (343)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-SSCCSEEEECTTS
T ss_pred EEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc-CCCCcEEEEcCCC
Confidence 5789985 34 334445777889999999999998888876 899999987 55532 2232 3378899999999
Q ss_pred CEEEEeC-CCCeEEEeeCCCC---ceEEecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEee
Q psy15612 72 KWFVSTG-KDNLLNAWRTPYG---ASIFQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEVI 130 (131)
Q Consensus 72 ~~~~~~~-~~~~i~~w~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~ 130 (131)
+.+++++ .++.+.+||+.++ +..........+.+++|+|+++++++++ .++.+.+||+.
T Consensus 96 ~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 96 QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp SEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEec
Confidence 9876655 4788999999533 3333334555688999999999887776 78999999974
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=7e-17 Score=96.57 Aligned_cols=129 Identities=15% Similarity=0.151 Sum_probs=97.4
Q ss_pred CEEEeCCC-Cceeeee-cC-CCCeEEEEECCCCCEEEEEeC--CC--cEEEEeCCCCCeEEeeccccceEEEEEccCCCE
Q psy15612 1 MYLQSVSP-GRQLQQH-DF-SSQIFSLGYCPSGEWLAVGME--NS--NVEVLHALKPDKYQLHLHESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~-~~~~~~~-~~-~~~v~~~~~~~~~~~l~~~~~--~~--~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 73 (131)
|++||+++ ++..... .+ ...+.+++|+|+++.++++.. ++ .+..++..++....+..+. .+..++|+|+++.
T Consensus 64 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~ 142 (297)
T 2ojh_A 64 LYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKS 142 (297)
T ss_dssp EEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSE
T ss_pred EEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCC-CccceEECCCCCE
Confidence 57899998 7776665 33 367889999999999999883 33 4555555666555544443 4888999999998
Q ss_pred EE-EeCCCCeEEEeeC--CCCceEEecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEee
Q psy15612 74 FV-STGKDNLLNAWRT--PYGASIFQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEVI 130 (131)
Q Consensus 74 ~~-~~~~~~~i~~w~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~ 130 (131)
++ +++.++.+.+|++ .+++......+...+.+++|+|++++++.++ .++.+.+|++.
T Consensus 143 l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 143 FTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred EEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 77 6778888888874 4555556666778899999999999887655 58899999874
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.78 E-value=4.2e-17 Score=99.39 Aligned_cols=126 Identities=15% Similarity=0.121 Sum_probs=98.3
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eeec----------------------
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLHL---------------------- 57 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~---------------------- 57 (131)
|++||+++++.+..+.....+..++|+|+++.++++ ++.+.+||+.+++.. .+..
T Consensus 117 i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 194 (337)
T 1pby_B 117 VALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHES 194 (337)
T ss_dssp EEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTT
T ss_pred EEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccC
Confidence 478999988888777556678889999999988877 578999998766532 1111
Q ss_pred --------------------------------------------cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612 58 --------------------------------------------HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS 93 (131)
Q Consensus 58 --------------------------------------------~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 93 (131)
+...+..++|+|++++++++ ++.+.+||+.+++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~ 272 (337)
T 1pby_B 195 SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNAS 272 (337)
T ss_dssp TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEE
T ss_pred CCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcC
Confidence 11234568999999998888 78999999998887
Q ss_pred EEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 94 IFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 94 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.........+.+++|+|+++++++++.++.|.+||+.
T Consensus 273 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 273 IKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred cceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence 7444455678899999999999888889999999963
No 143
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.78 E-value=1.4e-18 Score=115.53 Aligned_cols=117 Identities=9% Similarity=0.127 Sum_probs=91.2
Q ss_pred CEEEeCCCCceeeeecCCC----CeEEEEECCCCCEEEEEeC---------CCcEEEEeCCCCCe---EEeeccccceEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSS----QIFSLGYCPSGEWLAVGME---------NSNVEVLHALKPDK---YQLHLHESCVLS 64 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~---------~~~v~~~~~~~~~~---~~~~~~~~~v~~ 64 (131)
|++||+.+++....+.+.. .+.+++|||||+.|++++. ++.+.+||+.+++. ..+ ...+..
T Consensus 38 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~ 114 (719)
T 1z68_A 38 IVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQY 114 (719)
T ss_dssp EEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCC
T ss_pred EEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---Cccccc
Confidence 5799999998877774332 3889999999999988766 68999999998876 333 245788
Q ss_pred EEEccCCCEEEEeCCCCeEEEeeCCCCceEEec--CCCCCe-----------------EEEEECCCCCEEEEecCC
Q psy15612 65 LRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS--KESSSV-----------------LSCDISADDKYIVTGSGD 121 (131)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~--~~~~~v-----------------~~~~~~~~~~~l~~~~~d 121 (131)
++|||||+.++.+. ++.|++|+..+++..... ++...+ ..++|+|||++|++++.|
T Consensus 115 ~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 115 LCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp EEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred ceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 99999999998875 789999999888766322 222222 489999999999987754
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.77 E-value=1.2e-16 Score=97.42 Aligned_cols=129 Identities=10% Similarity=0.056 Sum_probs=98.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCc-EEEEeCCCCC-e----EEeeccccceEEEEEccCCCE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSN-VEVLHALKPD-K----YQLHLHESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~-v~~~~~~~~~-~----~~~~~~~~~v~~~~~~~~~~~ 73 (131)
|++||+++++.+..+.....+..++|+|+|+.++++ ..++. +.+|++.... . .........+..++|+|+|++
T Consensus 110 i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~ 189 (331)
T 3u4y_A 110 MQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNF 189 (331)
T ss_dssp EEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSE
T ss_pred EEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCE
Confidence 578999999988888667778999999999866554 55578 9999987533 2 122233456789999999996
Q ss_pred EE-EeCCCCeEEEeeCCCCce---EEecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEe
Q psy15612 74 FV-STGKDNLLNAWRTPYGAS---IFQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEV 129 (131)
Q Consensus 74 ~~-~~~~~~~i~~w~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~ 129 (131)
++ +...++.+.+||+.+++. .........+..++|+|+|++++.++ .++.|.+||+
T Consensus 190 l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 190 AFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp EEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred EEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 65 455688999999998887 54444567778999999999776554 4678999986
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.77 E-value=1.8e-17 Score=114.12 Aligned_cols=128 Identities=13% Similarity=0.142 Sum_probs=107.9
Q ss_pred CEEEeCCCCceeeeecCCC-CeEEEEECCCCCEEEEEeCCCcEE-EEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQHDFSS-QIFSLGYCPSGEWLAVGMENSNVE-VLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~v~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|++|++.+++......+.. .+..++|+ +|+.+++++.+..+. +|++.++....+..+...+..++|+|||+.+++++
T Consensus 319 i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~ 397 (1045)
T 1k32_A 319 AFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAN 397 (1045)
T ss_dssp EEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEE
T ss_pred EEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEEC
Confidence 4678888777665456666 89999999 999999988887888 88998887766667778899999999999999999
Q ss_pred CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCC----------CcEEEEEe
Q psy15612 79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGD----------KKATVYEV 129 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~vw~~ 129 (131)
.++.+++||+.+++.. ....+...+..++|+|+|+++++++.+ +.+.+||+
T Consensus 398 ~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 398 DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Confidence 9999999999999887 444788888999999999999877654 38999986
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.76 E-value=7.2e-17 Score=99.03 Aligned_cols=130 Identities=13% Similarity=0.032 Sum_probs=103.1
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCe-EEeecccc---------ceEEEEEcc
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDK-YQLHLHES---------CVLSLRFAA 69 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~-~~~~~~~~---------~v~~~~~~~ 69 (131)
|.+||..+++.+..+.....+..++|+|+++.++.+ ..++.+.+||..+++. ..+..+.. .+..+.|+|
T Consensus 71 v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 150 (353)
T 3vgz_A 71 VYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD 150 (353)
T ss_dssp EEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET
T ss_pred EEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC
Confidence 478999999988887666678889999999966554 5578999999998875 33333221 268899999
Q ss_pred CCCEEEEeC--CCCeEEEeeCCCCceEEecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 70 CGKWFVSTG--KDNLLNAWRTPYGASIFQSK-ESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 70 ~~~~~~~~~--~~~~i~~w~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++.++.++ .++.+.+||..+++...... +...+..++|+|+++++++++.++.+.+||+.
T Consensus 151 dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~ 214 (353)
T 3vgz_A 151 ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTA 214 (353)
T ss_dssp TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETT
T ss_pred CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECC
Confidence 999877665 47889999999988874443 56668899999999999999889999999863
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.75 E-value=8.7e-17 Score=98.20 Aligned_cols=129 Identities=11% Similarity=0.114 Sum_probs=94.1
Q ss_pred CEEEeCC--CCce--eeeecCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCC---CeEEeeccccceEEEEEccCCC
Q psy15612 1 MYLQSVS--PGRQ--LQQHDFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKP---DKYQLHLHESCVLSLRFAACGK 72 (131)
Q Consensus 1 i~iwd~~--~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~ 72 (131)
|++|++. +++. +..+.....+..++|+|+++.+++++. ++.+.+|++..+ ...........+.+++|+|+++
T Consensus 62 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 141 (343)
T 1ri6_A 62 VLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNR 141 (343)
T ss_dssp EEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSS
T ss_pred EEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCC
Confidence 4688887 5553 333444447889999999998877665 788999999422 2222233445688999999999
Q ss_pred EEEEeC-CCCeEEEeeCCC-CceEE------ecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612 73 WFVSTG-KDNLLNAWRTPY-GASIF------QSKESSSVLSCDISADDKYIVTG-SGDKKATVYEV 129 (131)
Q Consensus 73 ~~~~~~-~~~~i~~w~~~~-~~~~~------~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~ 129 (131)
.+++++ .++.+.+||+.+ ++... .......+..++|+|++++++.+ ..++.+.+|++
T Consensus 142 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~ 207 (343)
T 1ri6_A 142 TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWEL 207 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEES
T ss_pred EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 887776 789999999987 65431 22245678899999999977554 47889999997
No 148
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.75 E-value=5.3e-16 Score=95.19 Aligned_cols=129 Identities=10% Similarity=0.019 Sum_probs=101.3
Q ss_pred CEEEeCCCCceeeeecCC--C--------CeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCeEE-eeccccceEEEEE
Q psy15612 1 MYLQSVSPGRQLQQHDFS--S--------QIFSLGYCPSGEWLAVGM--ENSNVEVLHALKPDKYQ-LHLHESCVLSLRF 67 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~--~--------~v~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~-~~~~~~~v~~~~~ 67 (131)
|.+||.++++.+..+... . .+..+.|+|+++.+++++ .++.|.+||..+++... +..+...+..++|
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLAL 192 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEE
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEE
Confidence 478999999887776321 1 278899999999877765 47889999999887644 3335556889999
Q ss_pred ccCCCEEEEeCCCCeEEEeeCCCCceEE-ec----CCCCCeEEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612 68 AACGKWFVSTGKDNLLNAWRTPYGASIF-QS----KESSSVLSCDISADDKYIVTGSG-DKKATVYEV 129 (131)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~~-~~----~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~ 129 (131)
+|+++.+++++.++.+.+||..+++... .. ++...+..++|+|++++++.++. ++.+.+||+
T Consensus 193 s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 193 DSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp ETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 9999999999999999999999988772 22 24556788999999997766554 589999986
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.73 E-value=1.3e-15 Score=93.64 Aligned_cols=130 Identities=8% Similarity=-0.019 Sum_probs=93.7
Q ss_pred CEEEeCCCCce--eeee-cCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCC-CCCeEE---eec---------cccceE
Q psy15612 1 MYLQSVSPGRQ--LQQH-DFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHAL-KPDKYQ---LHL---------HESCVL 63 (131)
Q Consensus 1 i~iwd~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~-~~~~~~---~~~---------~~~~v~ 63 (131)
|++||+.+++. +..+ .+...+..++|+|+|+.|++++ .++.+.+|++. .+.... +.. ....+.
T Consensus 65 v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~ 144 (347)
T 3hfq_A 65 IAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIH 144 (347)
T ss_dssp EEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEE
T ss_pred EEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCce
Confidence 46899876653 3332 4667788999999999888887 67889999995 333322 111 112478
Q ss_pred EEEEccCCCEEEEeCCCCeEEEeeCC-CCceEE----ecCCCCCeEEEEECCCCCEEEE-ecCCCcEEEEEee
Q psy15612 64 SLRFAACGKWFVSTGKDNLLNAWRTP-YGASIF----QSKESSSVLSCDISADDKYIVT-GSGDKKATVYEVI 130 (131)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~i~~w~~~-~~~~~~----~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~vw~~~ 130 (131)
+++|+|+|+.+++...++.+.+|++. +++... .......+..++|+|+|+++++ ...++.+.+|++.
T Consensus 145 ~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 145 YTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 89999999966666778899999998 555431 2234457889999999996655 5567899999874
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.73 E-value=1.5e-16 Score=105.68 Aligned_cols=130 Identities=14% Similarity=0.158 Sum_probs=98.0
Q ss_pred CEEEeCCC-----Cceeeee-cCCCC--------------eEEEEECCCCCEEEEEe-----------------------
Q psy15612 1 MYLQSVSP-----GRQLQQH-DFSSQ--------------IFSLGYCPSGEWLAVGM----------------------- 37 (131)
Q Consensus 1 i~iwd~~~-----~~~~~~~-~~~~~--------------v~~~~~~~~~~~l~~~~----------------------- 37 (131)
|++||+.+ ++..... ..... +..+.|+|||+.|++++
T Consensus 143 i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 222 (706)
T 2z3z_A 143 LYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKP 222 (706)
T ss_dssp EEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEE
T ss_pred EEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEE
Confidence 57899988 7766554 22222 47899999999999887
Q ss_pred ----------CCCcEEEEeCCCCCeEEee---ccccceEEEEEccCCCEEEEeCCCC-----eEEEeeCCCC-ceEEe--
Q psy15612 38 ----------ENSNVEVLHALKPDKYQLH---LHESCVLSLRFAACGKWFVSTGKDN-----LLNAWRTPYG-ASIFQ-- 96 (131)
Q Consensus 38 ----------~~~~v~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~-----~i~~w~~~~~-~~~~~-- 96 (131)
.+..+.+||+.+++...+. .+...+..++|+|||+.+++++.++ .+.+||..++ .....
T Consensus 223 ~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~ 302 (706)
T 2z3z_A 223 LYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV 302 (706)
T ss_dssp ECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE
T ss_pred eeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE
Confidence 3467999999888764433 4567789999999999998876665 8999999988 43322
Q ss_pred cCCCC---CeEEEEECC--CCCEEEEecCCCcEEEEEee
Q psy15612 97 SKESS---SVLSCDISA--DDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 97 ~~~~~---~v~~~~~~~--~~~~l~~~~~d~~i~vw~~~ 130 (131)
..... .+..++|+| +|+++++++.|+.+++|++.
T Consensus 303 ~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 303 ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 12222 246789999 99999999889999999763
No 151
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.72 E-value=3.1e-16 Score=104.59 Aligned_cols=110 Identities=7% Similarity=0.031 Sum_probs=91.1
Q ss_pred CCCeEEEEECCCCCEEEEEeC-CC-----cEEEEeCCCCCeEEeec-cc------------------------cceEEEE
Q psy15612 18 SSQIFSLGYCPSGEWLAVGME-NS-----NVEVLHALKPDKYQLHL-HE------------------------SCVLSLR 66 (131)
Q Consensus 18 ~~~v~~~~~~~~~~~l~~~~~-~~-----~v~~~~~~~~~~~~~~~-~~------------------------~~v~~~~ 66 (131)
...+..++|+|||+.|++++. ++ .|.+||+.+++...+.. +. ..+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 346899999999999999988 77 89999999887644332 22 2378899
Q ss_pred EccCCCEEEEeCCCCeEEEeeCCCC---ceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 67 FAACGKWFVSTGKDNLLNAWRTPYG---ASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 67 ~~~~~~~~~~~~~~~~i~~w~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
|+|||+++++++. +.+++||+.++ +...+..+...+..++|+|+|++++.++ ++.|.+||+
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~ 179 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDL 179 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEET
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEec
Confidence 9999999998876 89999999988 5556666778899999999999998887 468999986
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.72 E-value=1.8e-15 Score=93.43 Aligned_cols=114 Identities=10% Similarity=0.086 Sum_probs=84.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCeEE---ee---ccccceEEEEEccCCCEEEEeCCC--CeEEEe
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHALKPDKYQ---LH---LHESCVLSLRFAACGKWFVSTGKD--NLLNAW 86 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~~~~~---~~---~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~w 86 (131)
.....+..++|+|+|+++++++ .++.|.+|++.++.... +. .+...+..++|+|||++++++..+ +.+.+|
T Consensus 208 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~ 287 (361)
T 3scy_A 208 APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIF 287 (361)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEE
T ss_pred CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEE
Confidence 4556688999999999887776 58899999998665422 21 223446799999999998776554 889999
Q ss_pred eCC--CCceE--EecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEe
Q psy15612 87 RTP--YGASI--FQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEV 129 (131)
Q Consensus 87 ~~~--~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~ 129 (131)
++. +++.. ........+..++|+|+|+++++++ .++.+.+|++
T Consensus 288 ~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 288 KVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp EECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred EEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 985 45533 2222256788999999999888776 5788999865
No 153
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.72 E-value=1.1e-16 Score=107.12 Aligned_cols=128 Identities=9% Similarity=0.058 Sum_probs=96.2
Q ss_pred CEEEeCCCCceeeee-cCCC-----CeEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCCeEEeeccccceEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSS-----QIFSLGYCPSGEWLAVGMEN---------SNVEVLHALKPDKYQLHLHESCVLSL 65 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~-----~v~~~~~~~~~~~l~~~~~~---------~~v~~~~~~~~~~~~~~~~~~~v~~~ 65 (131)
|++||+.++++...+ .+.. ....+.|||||+.|+.++.+ +.+.+||+.+++...+..+...+...
T Consensus 38 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~ 117 (740)
T 4a5s_A 38 ILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWV 117 (740)
T ss_dssp EEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEE
T ss_pred EEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceee
Confidence 579999999887666 3332 22448899999999988765 55679999999887777778889999
Q ss_pred EEccCCCEEEEeCCCCeEEEeeCCCCceEEec--CCCCCe-----------------EEEEECCCCCEEEEecCC-CcEE
Q psy15612 66 RFAACGKWFVSTGKDNLLNAWRTPYGASIFQS--KESSSV-----------------LSCDISADDKYIVTGSGD-KKAT 125 (131)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~--~~~~~v-----------------~~~~~~~~~~~l~~~~~d-~~i~ 125 (131)
+|||||+.++.+ .++.|++|+..+++...+. ++...+ ..+.|||||++|+.++.| +.+.
T Consensus 118 ~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~ 196 (740)
T 4a5s_A 118 TWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVP 196 (740)
T ss_dssp EECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCC
T ss_pred EECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCc
Confidence 999999999887 4789999999887765322 222222 358999999999887644 3355
Q ss_pred EEEe
Q psy15612 126 VYEV 129 (131)
Q Consensus 126 vw~~ 129 (131)
+|++
T Consensus 197 ~~~~ 200 (740)
T 4a5s_A 197 LIEY 200 (740)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5554
No 154
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.71 E-value=1.2e-15 Score=99.09 Aligned_cols=130 Identities=8% Similarity=0.051 Sum_probs=102.6
Q ss_pred CEEEeC--CCCceeeeecCCCCeEEEEECC----CCCEEEEEeC-CCcEEEEeCCCCCeE-Eeec----------c-ccc
Q psy15612 1 MYLQSV--SPGRQLQQHDFSSQIFSLGYCP----SGEWLAVGME-NSNVEVLHALKPDKY-QLHL----------H-ESC 61 (131)
Q Consensus 1 i~iwd~--~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-~~~v~~~~~~~~~~~-~~~~----------~-~~~ 61 (131)
|++||+ .+++.+..+.+...+..++|+| +|+++++++. ++++.+||..+.++. .+.. | ...
T Consensus 202 V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~ 281 (543)
T 1nir_A 202 IDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPR 281 (543)
T ss_dssp EEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCC
T ss_pred EEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCc
Confidence 579999 8888888887777889999999 9999988874 799999999888753 3332 2 236
Q ss_pred eEEEEEccCCCE-EEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEee
Q psy15612 62 VLSLRFAACGKW-FVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEVI 130 (131)
Q Consensus 62 v~~~~~~~~~~~-~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~~ 130 (131)
+..+.++|+++. +++...++.|.+||..+.+.+ ....+...+..++|+|+|++++++ ..+++|.+||+.
T Consensus 282 v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~ 354 (543)
T 1nir_A 282 VAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK 354 (543)
T ss_dssp EEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred eEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECC
Confidence 889999997765 556678899999999876654 233466778899999999987654 458899999963
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.71 E-value=5.8e-16 Score=94.81 Aligned_cols=125 Identities=10% Similarity=0.062 Sum_probs=91.9
Q ss_pred CEEEeCCCCcee---eeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eeeccc-----------------
Q psy15612 1 MYLQSVSPGRQL---QQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLHLHE----------------- 59 (131)
Q Consensus 1 i~iwd~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~----------------- 59 (131)
|.+||+++++.. ....+...+.+++|+|+++ ++.++. .+.+||+.+++.. .+....
T Consensus 127 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (349)
T 1jmx_B 127 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPH 203 (349)
T ss_dssp EEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCC
T ss_pred EEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecC
Confidence 468898875433 3344555788999999999 555543 4999999877642 222111
Q ss_pred ---------------------------------------------------cceEEEEEcc-CCCEEEEeCCCCeEEEee
Q psy15612 60 ---------------------------------------------------SCVLSLRFAA-CGKWFVSTGKDNLLNAWR 87 (131)
Q Consensus 60 ---------------------------------------------------~~v~~~~~~~-~~~~~~~~~~~~~i~~w~ 87 (131)
..+..+.|+| +++.++++ ++.+.+||
T Consensus 204 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d 281 (349)
T 1jmx_B 204 QSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYD 281 (349)
T ss_dssp CCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEE
T ss_pred CCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEE
Confidence 1345677789 99998888 88999999
Q ss_pred CCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 88 TPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+.+++..........+.+++|+|+++++++++.++.|.+||+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 282 LKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp TTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred CccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEecc
Confidence 9998877444445567899999999988888888999999963
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.71 E-value=2.3e-16 Score=96.59 Aligned_cols=126 Identities=10% Similarity=0.033 Sum_probs=93.9
Q ss_pred CEEEeCCCCceeeeecCCC--CeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCeE-Eeecc------ccceEEEEEccC
Q psy15612 1 MYLQSVSPGRQLQQHDFSS--QIFSLGYCPSGEWLA-VGMENSNVEVLHALKPDKY-QLHLH------ESCVLSLRFAAC 70 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~~-~~~~~------~~~v~~~~~~~~ 70 (131)
|++||..+++.+..+.... .+..++|+|+++.++ +...++.|.+||+.+++.. .+... ...+..++|+|+
T Consensus 23 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spd 102 (349)
T 1jmx_B 23 LHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPD 102 (349)
T ss_dssp EEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTT
T ss_pred EEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCC
Confidence 5799999998887774444 678999999998665 4456889999999887753 33322 223778999999
Q ss_pred CCEEEEeCCC------------CeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 71 GKWFVSTGKD------------NLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 71 ~~~~~~~~~~------------~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
|+++++++.+ +.+.+||+.+++.. ....+...+.+++|+|+++ ++.++. .+.+||+
T Consensus 103 g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~ 173 (349)
T 1jmx_B 103 GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDV 173 (349)
T ss_dssp SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECT
T ss_pred CCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeC
Confidence 9999988765 89999999875433 2233445688899999999 555543 4888885
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.71 E-value=8.1e-16 Score=94.50 Aligned_cols=127 Identities=11% Similarity=0.059 Sum_probs=91.0
Q ss_pred EEeCCCCceee--eecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEE---eeccccceEEEEEccCCCEE
Q psy15612 3 LQSVSPGRQLQ--QHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQ---LHLHESCVLSLRFAACGKWF 74 (131)
Q Consensus 3 iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~ 74 (131)
.||.++++... ...+...+..++|+|+|+ +++++. ++.|.+|++.++.... +..+...+..++|+|+|+++
T Consensus 22 ~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l 100 (347)
T 3hfq_A 22 TLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLV 100 (347)
T ss_dssp EEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEE
T ss_pred EEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEE
Confidence 34555666543 235567788899999999 555443 5789999997766432 34466778899999999988
Q ss_pred EEeC-CCCeEEEeeCC-CCceE--EecC----------CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 75 VSTG-KDNLLNAWRTP-YGASI--FQSK----------ESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 75 ~~~~-~~~~i~~w~~~-~~~~~--~~~~----------~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++++ .++.+.+|++. ++... .... ....+.+++|+|+|+++++...++.+.+|++.
T Consensus 101 ~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 101 YSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 8776 67899999985 34332 1111 12348889999999966666678899999974
No 158
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.70 E-value=1.9e-16 Score=105.33 Aligned_cols=128 Identities=11% Similarity=0.050 Sum_probs=94.0
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-cccc---------------
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-HESC--------------- 61 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~--------------- 61 (131)
|++||+++++..... .+...+..++|+|||+.|+.++. +.|.+|++.+++...+.. +...
T Consensus 93 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 93 YVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEe
Confidence 469999988763222 33445889999999999999876 789999998877654432 2222
Q ss_pred ---eEEEEEccCCCEEEEeCCCC----------------------------------eEEEeeCCCCceE-EecCC----
Q psy15612 62 ---VLSLRFAACGKWFVSTGKDN----------------------------------LLNAWRTPYGASI-FQSKE---- 99 (131)
Q Consensus 62 ---v~~~~~~~~~~~~~~~~~~~----------------------------------~i~~w~~~~~~~~-~~~~~---- 99 (131)
+..+.|+|||+.|+.++.++ .+++||+.+++.. .+..+
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 37899999999998876442 7899999888753 33322
Q ss_pred --CCCeEEEEECCCCCEEEEecC----CCcEEEEEe
Q psy15612 100 --SSSVLSCDISADDKYIVTGSG----DKKATVYEV 129 (131)
Q Consensus 100 --~~~v~~~~~~~~~~~l~~~~~----d~~i~vw~~ 129 (131)
...+..++|+|+|+++++.+. +..|.+||+
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 287 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDA 287 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEET
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeC
Confidence 567899999999998866532 346888885
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.68 E-value=1.4e-15 Score=99.20 Aligned_cols=108 Identities=14% Similarity=0.018 Sum_probs=84.9
Q ss_pred CeEEEEECCCCCE-EEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC----CeEEEeeCCCCceE
Q psy15612 20 QIFSLGYCPSGEW-LAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD----NLLNAWRTPYGASI 94 (131)
Q Consensus 20 ~v~~~~~~~~~~~-l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~i~~w~~~~~~~~ 94 (131)
.+...+|+|+++. +++...++.+.+||+.+++...+..+.. .++.|+|||+.+++++.+ ..|++||+.+++..
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 3446688888764 3333444556699999888766655444 789999999999977766 67999999988887
Q ss_pred EecCCCCCeEEEEECCCCCEEEEecCCC--cEEEEEe
Q psy15612 95 FQSKESSSVLSCDISADDKYIVTGSGDK--KATVYEV 129 (131)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~vw~~ 129 (131)
.+..+...+..++|+|||++++++..++ .|.+||+
T Consensus 189 ~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 189 VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDP 225 (582)
T ss_dssp EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECT
T ss_pred EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcC
Confidence 7777888899999999999999877788 7888875
No 160
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.68 E-value=1.3e-15 Score=100.62 Aligned_cols=112 Identities=13% Similarity=0.002 Sum_probs=87.5
Q ss_pred CCCCeEEEEECCCCCEEEEEeCC----------CcEEEEeCCC------CCeEEee-ccccceEEEEEccCCCEEEEeCC
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMEN----------SNVEVLHALK------PDKYQLH-LHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~----------~~v~~~~~~~------~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
+...+..++|+|||+.|++++.+ ..|.+|++.+ +....+. .+...+..++|||||++|+..+.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~ 207 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAW 207 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEEC
Confidence 56678999999999999988766 5799999988 6666666 66677888999999999987764
Q ss_pred C--------CeEEEeeCC-CC---ceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 80 D--------NLLNAWRTP-YG---ASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 80 ~--------~~i~~w~~~-~~---~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+ ..|++||+. ++ +.. ....+...+..++|+|+|++++++..++..++|.
T Consensus 208 ~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~ 269 (662)
T 3azo_A 208 DHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHR 269 (662)
T ss_dssp CTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEE
T ss_pred CCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEE
Confidence 4 379999998 56 333 3334568899999999999777877788545554
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.67 E-value=2.5e-14 Score=88.34 Aligned_cols=111 Identities=14% Similarity=0.142 Sum_probs=80.8
Q ss_pred CeEEEEECCCCCEEEEEe-CCCcEEEEeCCCCC-------e-------EEeeccccceEEEEEccCCCEEEEeC-CCCeE
Q psy15612 20 QIFSLGYCPSGEWLAVGM-ENSNVEVLHALKPD-------K-------YQLHLHESCVLSLRFAACGKWFVSTG-KDNLL 83 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~~-------~-------~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i 83 (131)
.+..++|+|+|+++++++ .++.+.+|++.... + .........+..++|+|||+++++++ .++.+
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 357899999999776655 47889999876432 1 11223345678999999999877665 68899
Q ss_pred EEeeCCCCceE---Ee---cCCCCCeEEEEECCCCCEEEEecC--CCcEEEEEee
Q psy15612 84 NAWRTPYGASI---FQ---SKESSSVLSCDISADDKYIVTGSG--DKKATVYEVI 130 (131)
Q Consensus 84 ~~w~~~~~~~~---~~---~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~vw~~~ 130 (131)
.+|++.+++.. .. ..+...+..++|+|+|++++++.. ++.+.+|++.
T Consensus 236 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 236 IAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred EEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 99999877653 11 123355789999999998866655 4789999973
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.66 E-value=3.2e-15 Score=100.05 Aligned_cols=128 Identities=10% Similarity=0.094 Sum_probs=93.6
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee--ccccce-----------------
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH--LHESCV----------------- 62 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~--~~~~~v----------------- 62 (131)
.+||+++++......+.+.+...+|||||+.|+.+. ++.|.+|++.++....+. ++...+
T Consensus 95 ~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 95 DIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 589999998776557778899999999999999885 578999999887765443 222222
Q ss_pred EEEEEccCCCEEEEeCCCC------------------------------------eEEEeeCCC---C---ceEEec---
Q psy15612 63 LSLRFAACGKWFVSTGKDN------------------------------------LLNAWRTPY---G---ASIFQS--- 97 (131)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~------------------------------------~i~~w~~~~---~---~~~~~~--- 97 (131)
..+.|||||+.|+..+.|. .+++||+.+ + +...+.
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~ 253 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA 253 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc
Confidence 3489999999998764221 478899988 7 333332
Q ss_pred ---CCCCCeEEEEECCCCCEEEEec----CCCcEEEEEee
Q psy15612 98 ---KESSSVLSCDISADDKYIVTGS----GDKKATVYEVI 130 (131)
Q Consensus 98 ---~~~~~v~~~~~~~~~~~l~~~~----~d~~i~vw~~~ 130 (131)
.+...+..++|+|+|+.++... .+..|.+||+.
T Consensus 254 ~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~ 293 (740)
T 4a5s_A 254 SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYD 293 (740)
T ss_dssp HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEE
T ss_pred cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECC
Confidence 2667789999999999665432 23468888864
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.64 E-value=6.9e-15 Score=91.22 Aligned_cols=129 Identities=9% Similarity=0.050 Sum_probs=91.9
Q ss_pred CEEEeCC-CCceeeeecC--CCCeEEEEECCCCCE--EEEEe-------------CCCcEEEEeCC-CCCeE-Eee----
Q psy15612 1 MYLQSVS-PGRQLQQHDF--SSQIFSLGYCPSGEW--LAVGM-------------ENSNVEVLHAL-KPDKY-QLH---- 56 (131)
Q Consensus 1 i~iwd~~-~~~~~~~~~~--~~~v~~~~~~~~~~~--l~~~~-------------~~~~v~~~~~~-~~~~~-~~~---- 56 (131)
|.+||+. +++......+ .+.+..++|+|+|+. ++++. .++.+.+|++. .++.. .+.
T Consensus 62 v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~ 141 (365)
T 1jof_A 62 WSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEY 141 (365)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEEC
T ss_pred EEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEe
Confidence 4689986 7766543322 133556889999995 44442 68899999996 35442 222
Q ss_pred ccccceEEEEEccCCCEEEEeC-CCCeEEEeeCC-CCceEE---ec--CCCCCeEEEEECCCCCEEEEecC-CCcEEEEE
Q psy15612 57 LHESCVLSLRFAACGKWFVSTG-KDNLLNAWRTP-YGASIF---QS--KESSSVLSCDISADDKYIVTGSG-DKKATVYE 128 (131)
Q Consensus 57 ~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~-~~~~~~---~~--~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~ 128 (131)
.+...+.+++|+|||++++++. .++.|.+|++. +++... .. .+...+..++|+|+|+++++++. ++.+.+|+
T Consensus 142 ~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 142 QENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence 2456789999999999887764 46789999998 676541 11 13667999999999998877664 67899997
Q ss_pred e
Q psy15612 129 V 129 (131)
Q Consensus 129 ~ 129 (131)
+
T Consensus 222 ~ 222 (365)
T 1jof_A 222 I 222 (365)
T ss_dssp E
T ss_pred E
Confidence 5
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.64 E-value=1.6e-13 Score=85.08 Aligned_cols=130 Identities=11% Similarity=0.066 Sum_probs=90.8
Q ss_pred CEEEeCC-CCceeeee-----cCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCC-CCCeEE---ee--ccccceEEEEE
Q psy15612 1 MYLQSVS-PGRQLQQH-----DFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHAL-KPDKYQ---LH--LHESCVLSLRF 67 (131)
Q Consensus 1 i~iwd~~-~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~-~~~~~~---~~--~~~~~v~~~~~ 67 (131)
+++|++. +++....+ .+...+..++|+|+|+++++++. ++.|.+|++. +++... +. .+...+..++|
T Consensus 121 v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~ 200 (365)
T 1jof_A 121 GNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAM 200 (365)
T ss_dssp EEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEE
T ss_pred EEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEE
Confidence 3578886 46554333 24567999999999998887654 6789999998 666432 22 13456899999
Q ss_pred ccCCCEEEEeCC-CCeEEEeeCC--CCceE------EecCC-----CC------CeEEEE-ECCCCCEEEEecCC-C---
Q psy15612 68 AACGKWFVSTGK-DNLLNAWRTP--YGASI------FQSKE-----SS------SVLSCD-ISADDKYIVTGSGD-K--- 122 (131)
Q Consensus 68 ~~~~~~~~~~~~-~~~i~~w~~~--~~~~~------~~~~~-----~~------~v~~~~-~~~~~~~l~~~~~d-~--- 122 (131)
+|||+++++++. ++.+.+|++. +++.. ..... .. .+..++ |+|+|+++++++.+ +
T Consensus 201 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~ 280 (365)
T 1jof_A 201 HPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFEL 280 (365)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTS
T ss_pred CCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCC
Confidence 999998877654 6789998764 55532 11111 11 488999 99999988766542 2
Q ss_pred --cEEEEEee
Q psy15612 123 --KATVYEVI 130 (131)
Q Consensus 123 --~i~vw~~~ 130 (131)
.|.+|++.
T Consensus 281 ~~~i~v~~~~ 290 (365)
T 1jof_A 281 QGYIAGFKLR 290 (365)
T ss_dssp CCEEEEEEEC
T ss_pred CCeEEEEEEC
Confidence 79999873
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.62 E-value=2.4e-15 Score=100.12 Aligned_cols=106 Identities=7% Similarity=0.048 Sum_probs=83.3
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecccc----ceEEEEEccCCCEEEEeCC---------CCeEEEeeC
Q psy15612 22 FSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHES----CVLSLRFAACGKWFVSTGK---------DNLLNAWRT 88 (131)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~---------~~~i~~w~~ 88 (131)
..++|+|++++++ .+.++.+.+||+.+++...+..+.. .+.+++|||||++++.++. ++.+++||+
T Consensus 19 ~~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 4789999996554 4568999999999988766554433 3889999999999988765 688999999
Q ss_pred CCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 89 PYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+++..........+..++|||+|+.|+.+. ++.|.+||+
T Consensus 98 ~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~ 137 (719)
T 1z68_A 98 SNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQR 137 (719)
T ss_dssp TTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred CCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeC
Confidence 9887731111235688899999999998875 679999986
No 166
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.61 E-value=8.1e-14 Score=85.53 Aligned_cols=113 Identities=12% Similarity=0.036 Sum_probs=83.6
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---C--cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---S--NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFV 75 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~--~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 75 (131)
|.+||+.+++.... ..+..+.|+|||+.|+....+ + .|.++++.+++...+..... +..+.|+|||+.|+
T Consensus 45 l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~ 119 (347)
T 2gop_A 45 IVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLL 119 (347)
T ss_dssp EEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEE
T ss_pred EEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEE
Confidence 45778877765433 567889999999999877643 2 37788888877665555445 89999999999888
Q ss_pred EeCCC---------------------------CeEEEeeCCCCce-EEecCCCCCeEEEEECCCCCEEEEecCC
Q psy15612 76 STGKD---------------------------NLLNAWRTPYGAS-IFQSKESSSVLSCDISADDKYIVTGSGD 121 (131)
Q Consensus 76 ~~~~~---------------------------~~i~~w~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d 121 (131)
.++.+ ..+.+||+.+++. ..+.. . .+..++|+|+| +++++..+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 120 IVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp EEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECC
T ss_pred EEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecc
Confidence 77532 4688999998887 43333 3 78899999999 77766554
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.61 E-value=4.1e-14 Score=93.48 Aligned_cols=128 Identities=13% Similarity=0.051 Sum_probs=94.6
Q ss_pred CEEEeCCC------Cceeeee-cCCCCeEEEEECCCCCEEEEEeCC--------CcEEEEeCC-CC---CeEEeec-ccc
Q psy15612 1 MYLQSVSP------GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMEN--------SNVEVLHAL-KP---DKYQLHL-HES 60 (131)
Q Consensus 1 i~iwd~~~------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~--------~~v~~~~~~-~~---~~~~~~~-~~~ 60 (131)
|++||+.+ ++..... .+...+..++|+|||+.|+.++.+ ..|.+||+. ++ ....+.. +..
T Consensus 163 i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~ 242 (662)
T 3azo_A 163 LAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE 242 (662)
T ss_dssp EEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB
T ss_pred EEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc
Confidence 46889887 6655555 556678889999999999887654 369999998 46 4444443 467
Q ss_pred ceEEEEEccCCCEEEEeCCCC--eEEEeeCCCCceEEecCCCCC---------eEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 61 CVLSLRFAACGKWFVSTGKDN--LLNAWRTPYGASIFQSKESSS---------VLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 61 ~v~~~~~~~~~~~~~~~~~~~--~i~~w~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+..+.|+|||+.+++++.++ .+..||..+++...+..+... +..++|+|+++++++++. +..++|.+
T Consensus 243 ~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 243 AIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp CEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred eEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence 889999999999777777777 677777767766533322211 457889999999999888 99999954
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.58 E-value=1.1e-12 Score=78.64 Aligned_cols=127 Identities=12% Similarity=0.147 Sum_probs=92.7
Q ss_pred CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc--ccceEEEEEccCCCEEE
Q psy15612 1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH--ESCVLSLRFAACGKWFV 75 (131)
Q Consensus 1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~ 75 (131)
|++||.. ++.+..+ .+...+..++++|+++.+++...++.|.+|+........+... ...+..++++++|+.++
T Consensus 144 i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v 222 (286)
T 1q7f_A 144 VIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILI 222 (286)
T ss_dssp EEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEE
T ss_pred EEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEE
Confidence 4567743 5555555 2345689999999999777777788999999865544444332 35688999999999888
Q ss_pred EeCCCC-eEEEeeCCCCceE-EecC--CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 76 STGKDN-LLNAWRTPYGASI-FQSK--ESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 76 ~~~~~~-~i~~w~~~~~~~~-~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+...++ .|.+|+.. ++.+ .... ....+..++++|+|+++++ +.++.|++|++.
T Consensus 223 ~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 223 ADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp EECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred EeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 887776 99999964 5544 2222 2345789999999987776 568999999863
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.57 E-value=2.2e-12 Score=77.32 Aligned_cols=127 Identities=9% Similarity=0.129 Sum_probs=94.8
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee--ccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH--LHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~ 76 (131)
|++|| .+++.+..+ .....+..++++|+++.+++...++.|.+|+........+. .+...+..++++|+|+.+++
T Consensus 102 i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 102 IQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp EEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred EEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEE
Confidence 46777 556666655 33457899999999998777777889999997654444443 34456889999999998777
Q ss_pred eCCCCeEEEeeCCCCceE-EecCC--CCCeEEEEECCCCCEEEEecCCC-cEEEEEe
Q psy15612 77 TGKDNLLNAWRTPYGASI-FQSKE--SSSVLSCDISADDKYIVTGSGDK-KATVYEV 129 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~-~~~~~--~~~v~~~~~~~~~~~l~~~~~d~-~i~vw~~ 129 (131)
...++.|.+||.. ++.+ ..... ...+..++++++|+++++...++ .|.+||.
T Consensus 181 ~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 181 DNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp EGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred ECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence 7788999999975 5444 33222 36789999999999888887775 8999974
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.55 E-value=2.4e-12 Score=78.88 Aligned_cols=128 Identities=16% Similarity=0.151 Sum_probs=96.5
Q ss_pred CEEEeCCCCceeeeec--CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC--CeEEe---------eccccceEEEEE
Q psy15612 1 MYLQSVSPGRQLQQHD--FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP--DKYQL---------HLHESCVLSLRF 67 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~--~~~~~---------~~~~~~v~~~~~ 67 (131)
|.+||..+++.+.... +...+..++++|+|+++++...++.|.+|+.... ....+ ..+...+..+++
T Consensus 71 i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~ 150 (329)
T 3fvz_A 71 ILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAV 150 (329)
T ss_dssp EEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEE
T ss_pred EEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEE
Confidence 4678888888876663 3457899999999998888888899999998765 23333 233346889999
Q ss_pred cc-CCCEEEEeC-CCCeEEEeeCCCCceEEecC-----------CCCCeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612 68 AA-CGKWFVSTG-KDNLLNAWRTPYGASIFQSK-----------ESSSVLSCDISAD-DKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 68 ~~-~~~~~~~~~-~~~~i~~w~~~~~~~~~~~~-----------~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~ 129 (131)
+| ++..+++.+ .++.|++|+ .+++.+.... +-..+..++++|+ ++++++...++.|++||.
T Consensus 151 ~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~ 225 (329)
T 3fvz_A 151 EPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKT 225 (329)
T ss_dssp CTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred eCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEEC
Confidence 99 788887776 689999999 4566652221 1234889999998 777777778889999986
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.55 E-value=4.7e-13 Score=83.21 Aligned_cols=129 Identities=12% Similarity=-0.040 Sum_probs=93.6
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee-ccccceEEE--EEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH-LHESCVLSL--RFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~--~~~~~~~~~~~ 76 (131)
|.+||+.+++..... .+...+..+.|+|+++.|+.+..+..+.+||+.+++...+. .+...+... .++|+++.++.
T Consensus 62 l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~ 141 (388)
T 3pe7_A 62 YYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVG 141 (388)
T ss_dssp EEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEE
T ss_pred EEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeecc
Confidence 356788888877666 34444456789999999999998889999999988865443 333334333 34899998874
Q ss_pred e----------------------CCCCeEEEeeCCCCceEEecCCCCCeEEEEECC-CCCEEEEecCC------CcEEEE
Q psy15612 77 T----------------------GKDNLLNAWRTPYGASIFQSKESSSVLSCDISA-DDKYIVTGSGD------KKATVY 127 (131)
Q Consensus 77 ~----------------------~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~vw 127 (131)
. ..+..|.+||+.+++...+..+...+..++|+| +|+.++....+ ..+.++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~ 221 (388)
T 3pe7_A 142 IEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLI 221 (388)
T ss_dssp EEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEE
T ss_pred ccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEE
Confidence 2 234679999999988775556677889999999 99988766543 256665
Q ss_pred Ee
Q psy15612 128 EV 129 (131)
Q Consensus 128 ~~ 129 (131)
|+
T Consensus 222 d~ 223 (388)
T 3pe7_A 222 NE 223 (388)
T ss_dssp ET
T ss_pred eC
Confidence 53
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.55 E-value=4.1e-13 Score=89.63 Aligned_cols=110 Identities=13% Similarity=0.167 Sum_probs=82.1
Q ss_pred CeEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCe------------
Q psy15612 20 QIFSLGYCPSGEWLAVGMENS-----NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNL------------ 82 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~------------ 82 (131)
.+..++|||||+.|+.+..++ .|++||+.+++..........+..++|+|||+.|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence 578999999999998765433 799999999886443222223668999999999988776654
Q ss_pred ----EEEeeCCCCce---E-Eec-CCCCCeEEEEECCCCCEEEEecC-----CCcEEEEEe
Q psy15612 83 ----LNAWRTPYGAS---I-FQS-KESSSVLSCDISADDKYIVTGSG-----DKKATVYEV 129 (131)
Q Consensus 83 ----i~~w~~~~~~~---~-~~~-~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~vw~~ 129 (131)
|++|++.+++. + ... .+...+..+.|+|+|++++..+. +..+.+||+
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~ 266 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDL 266 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEG
T ss_pred CCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEEC
Confidence 99999988763 2 222 24556789999999999876653 457888886
No 173
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.55 E-value=2.8e-12 Score=83.83 Aligned_cols=93 Identities=13% Similarity=0.037 Sum_probs=74.7
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC--CCCe-EEeeccccceEEEEEc----cCCCE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL--KPDK-YQLHLHESCVLSLRFA----ACGKW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~--~~~~-~~~~~~~~~v~~~~~~----~~~~~ 73 (131)
|.++|..+++.+..+.....+..+.++|||+++++++.++.|.+||+. +.+. .++.. ......++|+ |||++
T Consensus 179 V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~ 257 (567)
T 1qks_A 179 IALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKY 257 (567)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTE
T ss_pred EEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCE
Confidence 468999999999888666677899999999999999999999999995 5554 33433 3457899999 69998
Q ss_pred EEEeCC-CCeEEEeeCCCCceE
Q psy15612 74 FVSTGK-DNLLNAWRTPYGASI 94 (131)
Q Consensus 74 ~~~~~~-~~~i~~w~~~~~~~~ 94 (131)
+++++. ++.+.++|..+.+.+
T Consensus 258 l~v~n~~~~~v~ViD~~t~~~~ 279 (567)
T 1qks_A 258 AIAGAYWPPQYVIMDGETLEPK 279 (567)
T ss_dssp EEEEEEETTEEEEEETTTCCEE
T ss_pred EEEEEccCCeEEEEECCCCcEE
Confidence 887655 588999998877665
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.54 E-value=4.4e-13 Score=83.36 Aligned_cols=127 Identities=9% Similarity=-0.014 Sum_probs=90.7
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECC-CCCEEEEEeCC------CcEEEEeCCCCCeEEeecc--ccceEEEEEccCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCP-SGEWLAVGMEN------SNVEVLHALKPDKYQLHLH--ESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~ 71 (131)
|++||+.+++......+...+..+.|+| +++.++....+ ..|.++++.+.....+..+ ...+..+.|+|||
T Consensus 170 l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg 249 (396)
T 3c5m_A 170 LIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDG 249 (396)
T ss_dssp EEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTS
T ss_pred EEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCC
Confidence 4688998888776666777899999999 78877765543 3688889877665554443 2357889999999
Q ss_pred CEEEEeCCC-----CeEEEeeCCCCceEEecCCCCCeEEEEECC-CCCEEEEec----------------CCCcEEEEEe
Q psy15612 72 KWFVSTGKD-----NLLNAWRTPYGASIFQSKESSSVLSCDISA-DDKYIVTGS----------------GDKKATVYEV 129 (131)
Q Consensus 72 ~~~~~~~~~-----~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~----------------~d~~i~vw~~ 129 (131)
+.++..+.+ +.+++||+.+++......... .. +.|+| +|++++.++ .+..+.+||+
T Consensus 250 ~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 250 SAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNT 327 (396)
T ss_dssp SCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEET
T ss_pred CEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEec
Confidence 987766433 349999998887653322222 23 88999 999887654 2467888885
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.51 E-value=1.1e-11 Score=75.70 Aligned_cols=129 Identities=7% Similarity=0.072 Sum_probs=92.9
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCC----CcEEEEeCCCCCeEEe-e--ccccceEEEEEccCCC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMEN----SNVEVLHALKPDKYQL-H--LHESCVLSLRFAACGK 72 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~----~~v~~~~~~~~~~~~~-~--~~~~~v~~~~~~~~~~ 72 (131)
|++||.++++..... .+...+..++++|+++++++...+ +.|.+||..+.....+ . .....+.++.++|+|+
T Consensus 68 i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~ 147 (333)
T 2dg1_A 68 IFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG 147 (333)
T ss_dssp EEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC
T ss_pred EEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC
Confidence 467888877766544 566789999999999987777665 5799999988775432 2 2345688999999999
Q ss_pred EEEEeCC------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612 73 WFVSTGK------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV 129 (131)
Q Consensus 73 ~~~~~~~------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~ 129 (131)
.+++... .+.+..++..+++..........+..++|+|+++.++ +.+.++.|.+||+
T Consensus 148 l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~ 211 (333)
T 2dg1_A 148 FYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIAL 211 (333)
T ss_dssp EEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred EEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEe
Confidence 8776654 3567777776655543323334578899999998654 4455788999987
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.51 E-value=2e-12 Score=80.25 Aligned_cols=127 Identities=14% Similarity=0.067 Sum_probs=89.0
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCCe-EEeecc------ccceE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME----------NSNVEVLHALKPDK-YQLHLH------ESCVL 63 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------~~~v~~~~~~~~~~-~~~~~~------~~~v~ 63 (131)
|++||..+++.+..+...... .++++|++++++++.. ++.|.+||..+.+. ..+... ...+.
T Consensus 33 v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~ 111 (361)
T 2oiz_A 33 VHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDG 111 (361)
T ss_dssp EEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGG
T ss_pred EEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcc
Confidence 468999999888777433334 8999999999988762 56799999988775 333321 23567
Q ss_pred EEEEccCCCEEEEeCC--CCeEEEeeCCCCceEEe-cCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEe
Q psy15612 64 SLRFAACGKWFVSTGK--DNLLNAWRTPYGASIFQ-SKESSSVLSCDISADD-KYIVTGSGDKKATVYEV 129 (131)
Q Consensus 64 ~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~ 129 (131)
.++++|||++++++.. ++.+.+||+.+++.+.. ....+. ..+.+.|++ +.+++.+.|+++.++++
T Consensus 112 ~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~ 180 (361)
T 2oiz_A 112 LFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINL 180 (361)
T ss_dssp GEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEE
T ss_pred eEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEE
Confidence 8999999999988764 57899999999877744 433322 224455654 45556666677666654
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.51 E-value=1.7e-12 Score=80.68 Aligned_cols=114 Identities=13% Similarity=-0.018 Sum_probs=83.3
Q ss_pred EeCCCCceeeee-cCCCCeEE-----EEECCCCCEEEEEeC-CC--cEEEEeCCCCCeEEeec-cccceEEEEEccCCCE
Q psy15612 4 QSVSPGRQLQQH-DFSSQIFS-----LGYCPSGEWLAVGME-NS--NVEVLHALKPDKYQLHL-HESCVLSLRFAACGKW 73 (131)
Q Consensus 4 wd~~~~~~~~~~-~~~~~v~~-----~~~~~~~~~l~~~~~-~~--~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 73 (131)
.|..++..+..+ .+...... .+|+|||+.|+..+. ++ .+.+||+.+++...+.. +...+....|+|||+.
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~ 94 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDA 94 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSE
T ss_pred ecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCE
Confidence 356677777666 55555555 789999999988877 56 38888998888765543 3334446789999999
Q ss_pred EEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEE--ECCCCCEEEE
Q psy15612 74 FVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCD--ISADDKYIVT 117 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~--~~~~~~~l~~ 117 (131)
|+.++.++.+++||+.+++.. ....+...+.... ++|++++++.
T Consensus 95 l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~ 141 (388)
T 3pe7_A 95 LFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVG 141 (388)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEE
T ss_pred EEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeecc
Confidence 999998899999999998876 3333444443333 4899998864
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.49 E-value=3e-12 Score=79.65 Aligned_cols=127 Identities=13% Similarity=0.096 Sum_probs=85.6
Q ss_pred CEEEeCCCCceeeeecC--CCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCCeEEeeccccceEEEEEcc-CCC
Q psy15612 1 MYLQSVSPGRQLQQHDF--SSQIFSLGYCPSGEWLAVGMEN-----SNVEVLHALKPDKYQLHLHESCVLSLRFAA-CGK 72 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 72 (131)
|.+||+.+++......+ ...+..+.|+|+|+.|+..+.+ +.|.+||+.+++...+..... .. +.|+| ||+
T Consensus 218 l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~ 295 (396)
T 3c5m_A 218 MWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGS 295 (396)
T ss_dssp CEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSS
T ss_pred EEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCc
Confidence 45677765554433332 2357889999999987776443 349999998887654443332 22 88999 999
Q ss_pred EEEEeC----------------CCCeEEEeeCCCCceEEecCCCC-----------CeEEEEECCCCCEEEEecC-CCcE
Q psy15612 73 WFVSTG----------------KDNLLNAWRTPYGASIFQSKESS-----------SVLSCDISADDKYIVTGSG-DKKA 124 (131)
Q Consensus 73 ~~~~~~----------------~~~~i~~w~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~l~~~~~-d~~i 124 (131)
.++.++ .+..+++||..+++...+..+.. .+..++|+|+|+.++..+. ++..
T Consensus 296 ~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~ 375 (396)
T 3c5m_A 296 LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVP 375 (396)
T ss_dssp EEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSC
T ss_pred eEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCc
Confidence 887643 34679999998877554333333 2567889999998876654 5666
Q ss_pred EEEEe
Q psy15612 125 TVYEV 129 (131)
Q Consensus 125 ~vw~~ 129 (131)
.+|.+
T Consensus 376 ~l~~~ 380 (396)
T 3c5m_A 376 AIYIA 380 (396)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 66654
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.49 E-value=2.5e-11 Score=73.19 Aligned_cols=126 Identities=11% Similarity=0.032 Sum_probs=91.8
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-----cccceEEEEEccCCCEE
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-----HESCVLSLRFAACGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~ 74 (131)
|+.||..++ ...+ .+...+..++++|+|+++++...++.|.+||..+++...+.. ....+..++++|+|+.+
T Consensus 52 i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~ 129 (296)
T 3e5z_A 52 TWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLW 129 (296)
T ss_dssp EEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEE
T ss_pred EEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEE
Confidence 457787766 3344 566779999999999988777667889999997777544321 12345679999999988
Q ss_pred EEe----C-------------CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 75 VST----G-------------KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 75 ~~~----~-------------~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++. + ..+.+..++.. ++..........+..++|+|+++.+++.+.++.|.+|++
T Consensus 130 vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~ 200 (296)
T 3e5z_A 130 FSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCL 200 (296)
T ss_dssp EEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEE
T ss_pred EECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEE
Confidence 763 2 13456666665 555444556677889999999998877777889999987
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.49 E-value=5.4e-13 Score=88.92 Aligned_cols=104 Identities=12% Similarity=0.065 Sum_probs=75.8
Q ss_pred CCeEEEEECCCCCEEEEE-----eCCCcEEEEeCCCCCeE-EeeccccceEEEEEccCCCEEEEeCCCCe----------
Q psy15612 19 SQIFSLGYCPSGEWLAVG-----MENSNVEVLHALKPDKY-QLHLHESCVLSLRFAACGKWFVSTGKDNL---------- 82 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~-----~~~~~v~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---------- 82 (131)
..+..++|||||+.|+.. +.+..|++||+.+++.. ...........++|+|||+.|+.++.+..
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 358899999999998843 33468999999988754 11111111268999999999998877665
Q ss_pred ---EEEeeCCCCce---E-Ee-cCCCCCeEEEEECCCCCEEEEecCCC
Q psy15612 83 ---LNAWRTPYGAS---I-FQ-SKESSSVLSCDISADDKYIVTGSGDK 122 (131)
Q Consensus 83 ---i~~w~~~~~~~---~-~~-~~~~~~v~~~~~~~~~~~l~~~~~d~ 122 (131)
|++|++.+++. + .. ..+...+..+.|+|+|++++..+.++
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence 99999988762 2 22 23446788999999999988766544
No 181
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.48 E-value=5.5e-12 Score=77.29 Aligned_cols=128 Identities=13% Similarity=0.087 Sum_probs=93.5
Q ss_pred CEEEeCCCCceeeeecC-----------CCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-EEe--eccccceEEE
Q psy15612 1 MYLQSVSPGRQLQQHDF-----------SSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-YQL--HLHESCVLSL 65 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~-----------~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-~~~--~~~~~~v~~~ 65 (131)
|++|| .+++.+..+.. ...+..++++|+ +.++++...++.|.+|+..+++. ..+ ..+...+..+
T Consensus 168 I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~ 246 (329)
T 3fvz_A 168 IVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAI 246 (329)
T ss_dssp EEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEE
T ss_pred EEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCccee
Confidence 45677 45666665521 123889999998 66667777788999999986664 333 2345678899
Q ss_pred EEccCCCEEEEe-------CCCCeEEEeeCCCCceEEe----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 66 RFAACGKWFVST-------GKDNLLNAWRTPYGASIFQ----SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 66 ~~~~~~~~~~~~-------~~~~~i~~w~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
+++| +..+... ..+..+.+|+..+++.+.. ..+...+..++++|+|+++++...++.|++|++.
T Consensus 247 ~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 247 SYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred eecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 9999 4433333 3345899999999988733 2456778999999999888888889999999874
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.47 E-value=4.8e-12 Score=77.59 Aligned_cols=127 Identities=6% Similarity=-0.049 Sum_probs=94.1
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC----------CcEEEEeCCCCCeE-Eeecc-ccceEEEEEc
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN----------SNVEVLHALKPDKY-QLHLH-ESCVLSLRFA 68 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----------~~v~~~~~~~~~~~-~~~~~-~~~v~~~~~~ 68 (131)
|.++|.++++.+..+........+.++|+|++++++..+ +.|.++|..+.++. .+... ...+..++++
T Consensus 154 v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~ 233 (328)
T 3dsm_A 154 ILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLN 233 (328)
T ss_dssp EEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEEC
T ss_pred EEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEe
Confidence 468899999888777555567789999999877766544 68999999888764 33322 2368899999
Q ss_pred cCCCEEEEeCCCCeEEEeeCCCCceE--EecC-CCCCeEEEEECC-CCCEEEEe----cCCCcEEEEEe
Q psy15612 69 ACGKWFVSTGKDNLLNAWRTPYGASI--FQSK-ESSSVLSCDISA-DDKYIVTG----SGDKKATVYEV 129 (131)
Q Consensus 69 ~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~-~~~~v~~~~~~~-~~~~l~~~----~~d~~i~vw~~ 129 (131)
|+++.++.+.. .+.+||..+++.. .... ....+..++++| +++++++. ..++.|.+||.
T Consensus 234 ~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 234 GTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp TTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred cCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 99999888765 8999999887764 1111 246789999999 55555665 56788999875
No 183
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.46 E-value=6.8e-12 Score=78.44 Aligned_cols=104 Identities=13% Similarity=0.114 Sum_probs=83.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
.+.. |..++| ++..|+++ .++.|++||+.+... .....+...+.++.+.+. .++.++.||.+.+||+.+++..
T Consensus 86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~ 159 (388)
T 1xip_A 86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK 159 (388)
T ss_dssp ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE
T ss_pred eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc
Confidence 5666 999999 89999988 778999999976653 445566777888777654 3888889999999999987765
Q ss_pred EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 95 FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
. ....|.+++|+|+| ++.+..||++++|+..
T Consensus 160 ~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~ 190 (388)
T 1xip_A 160 Q---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWR 190 (388)
T ss_dssp E---EEESEEEEEECSSE--EEEEETTSCEEEEEEE
T ss_pred c---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCC
Confidence 3 34689999999999 6778889999999763
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.45 E-value=5.4e-12 Score=84.33 Aligned_cols=128 Identities=5% Similarity=-0.010 Sum_probs=88.7
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCc----------------EEEEeCCCCCe---EEeec--cc
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSN----------------VEVLHALKPDK---YQLHL--HE 59 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~----------------v~~~~~~~~~~---~~~~~--~~ 59 (131)
|++||+.+++..........+..++|+|||+.|+.+..+.. |.+|++.++.. ..... +.
T Consensus 153 i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~ 232 (710)
T 2xdw_A 153 IKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEP 232 (710)
T ss_dssp EEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCT
T ss_pred EEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCC
Confidence 57899999987764422223677999999999998877665 99999987652 22222 34
Q ss_pred cceEEEEEccCCCEEEEeCC-----CCeEEEeeCCC------Cc--eEEecCCCCCeEEEEECCCCCEEEEecCC----C
Q psy15612 60 SCVLSLRFAACGKWFVSTGK-----DNLLNAWRTPY------GA--SIFQSKESSSVLSCDISADDKYIVTGSGD----K 122 (131)
Q Consensus 60 ~~v~~~~~~~~~~~~~~~~~-----~~~i~~w~~~~------~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~ 122 (131)
..+..+.|+|||++++..+. +..+++||+.+ +. ...+..+...+.. .|+|+|+.++..+.. .
T Consensus 233 ~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~ 311 (710)
T 2xdw_A 233 KWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNY 311 (710)
T ss_dssp TCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTC
T ss_pred eEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCC
Confidence 55788999999999887654 56899999876 42 3344444444443 488888877655442 3
Q ss_pred cEEEEEe
Q psy15612 123 KATVYEV 129 (131)
Q Consensus 123 ~i~vw~~ 129 (131)
.|.+||+
T Consensus 312 ~l~~~d~ 318 (710)
T 2xdw_A 312 RLINIDF 318 (710)
T ss_dssp EEEEEET
T ss_pred EEEEEeC
Confidence 5777775
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.45 E-value=1.3e-11 Score=75.67 Aligned_cols=128 Identities=5% Similarity=-0.053 Sum_probs=92.0
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eeeccc-----cceEEEEEccCCCEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLHLHE-----SCVLSLRFAACGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~-----~~v~~~~~~~~~~~~ 74 (131)
|.++|.++++.+..+.....+..++++|+++.+++...++.|.++|..+.+.. .+.... ..+..+++ .+++.+
T Consensus 66 v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~ly 144 (328)
T 3dsm_A 66 IFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVY 144 (328)
T ss_dssp EEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEE
T ss_pred EEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEE
Confidence 46899999999888866677899999998854444447899999999988764 333222 14566777 344444
Q ss_pred EEeC-CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC----------CcEEEEEe
Q psy15612 75 VSTG-KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD----------KKATVYEV 129 (131)
Q Consensus 75 ~~~~-~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~vw~~ 129 (131)
++.. .++.|.++|..+++..........+..+.++|+|+++++...+ +.|.++|.
T Consensus 145 v~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~ 210 (328)
T 3dsm_A 145 VNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDA 210 (328)
T ss_dssp EEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEET
T ss_pred EEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEEC
Confidence 4443 4889999999998877433344556789999999977776554 67888885
No 186
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.43 E-value=5.2e-12 Score=77.50 Aligned_cols=112 Identities=10% Similarity=0.024 Sum_probs=77.3
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---------------------------CcEEEEeCCCCCe-
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---------------------------SNVEVLHALKPDK- 52 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---------------------------~~v~~~~~~~~~~- 52 (131)
|.+||+.+++......... +..+.|+|+|+.|+.++.+ ..+.+|++.+++.
T Consensus 87 l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 87 IWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 3567888887766654445 9999999999998887632 4688899988876
Q ss_pred EEeeccccceEEEEEccCCCEEEEeCCC---------CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC
Q psy15612 53 YQLHLHESCVLSLRFAACGKWFVSTGKD---------NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD 121 (131)
Q Consensus 53 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~---------~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 121 (131)
..+.. . .+..+.|+||| .++++..+ ..+.++| +++...+..+ ..+..+ +|+|++++.++.+
T Consensus 166 ~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~ 235 (347)
T 2gop_A 166 EEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-VSFYAV--DSDGERILLYGKP 235 (347)
T ss_dssp EEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-ESEEEE--EECSSCEEEEECC
T ss_pred eeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC-cceeeE--CCCCCEEEEEEcc
Confidence 55554 4 78899999999 66666443 1355555 5555433333 444444 9999988776643
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.42 E-value=1.4e-10 Score=70.90 Aligned_cols=105 Identities=10% Similarity=0.060 Sum_probs=82.4
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCCC----CeEEEeeCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGKD----NLLNAWRTPY 90 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~----~~i~~w~~~~ 90 (131)
.+...+..++|+|++++++++..++.|.+||..+++...+. .+...+.+++++|+|+.+++...+ +.|.+||..+
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence 45567889999999997778888889999999888765543 456779999999999988777666 6899999987
Q ss_pred CceE-Eec--CCCCCeEEEEECCCCCEEEEecC
Q psy15612 91 GASI-FQS--KESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 91 ~~~~-~~~--~~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
++.. ... .....+..++++|+|+++++...
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEECC
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEecc
Confidence 7655 222 24567899999999998776653
No 188
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.41 E-value=2.3e-11 Score=81.70 Aligned_cols=110 Identities=13% Similarity=0.090 Sum_probs=78.7
Q ss_pred CeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCC-------------
Q psy15612 20 QIFSLGYCPSGEWLAVGMEN-----SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDN------------- 81 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------- 81 (131)
.+..+.|||||+.|+.+..+ ..|++||+.+++......+...+..++|+|| +.|+.++.+.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 57889999999999876543 3599999999886443222223357899999 9888776544
Q ss_pred -eEEEeeCCCCce---EEec--CCCCCeEEEEECCCCCEEEEecCC-----CcEEEEEee
Q psy15612 82 -LLNAWRTPYGAS---IFQS--KESSSVLSCDISADDKYIVTGSGD-----KKATVYEVI 130 (131)
Q Consensus 82 -~i~~w~~~~~~~---~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~~ 130 (131)
.|++|++.++.. +... .+...+..+.|+|+|++++..+.+ ..+.+||+.
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~ 302 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT 302 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC
Confidence 388999887652 2222 223458899999999988766543 378888863
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.39 E-value=6.4e-11 Score=70.29 Aligned_cols=112 Identities=13% Similarity=0.146 Sum_probs=86.0
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEec
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS 97 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~ 97 (131)
..+..++++|+++.+++...++.|.+|+..+...... ......+..++++++|..+++...++.|.+|+..........
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~ 229 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP 229 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECC
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeec
Confidence 4578899999998777766678899999887665332 223356889999999987777777889999998765444322
Q ss_pred -CCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 98 -KESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 98 -~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.....+..++++++|+++++...++.|.++++.
T Consensus 230 ~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 230 FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 233678999999999988888889999999864
No 190
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=3.2e-11 Score=75.42 Aligned_cols=110 Identities=15% Similarity=0.157 Sum_probs=85.3
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
|++||+.+....... .+...+.++.+.+.. ++++..||.+.+||+..+.... +...|.+++|||+| ++.+..
T Consensus 108 l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp EEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEET
T ss_pred EEEEEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEc
Confidence 579998876544433 566778888776543 8888999999999998777543 34579999999999 567888
Q ss_pred CCeEEEeeCCCCce--E-Ee------c---CCCCCeEEEEECCCCCEEEE
Q psy15612 80 DNLLNAWRTPYGAS--I-FQ------S---KESSSVLSCDISADDKYIVT 117 (131)
Q Consensus 80 ~~~i~~w~~~~~~~--~-~~------~---~~~~~v~~~~~~~~~~~l~~ 117 (131)
|+.+++|+...++. . .. . ++...|.++.|.+++.++++
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999998887664 2 12 2 36788999999999998876
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.39 E-value=5.4e-11 Score=71.45 Aligned_cols=125 Identities=8% Similarity=0.052 Sum_probs=93.0
Q ss_pred CEEEeCCCCceeeeecCC--CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeecc-ccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQHDFS--SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLH-ESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~-~~~v~~~~~~~~~~~~~~ 76 (131)
|++||.++|+.+..+... ..+.++.++|+|+.++ +.++.|..+|. +++. -++... ...+.++.+.|+|+.+++
T Consensus 17 v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~ 93 (276)
T 3no2_A 17 IAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVA 93 (276)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEE
T ss_pred EEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEE
Confidence 578999899999888433 4688999999999888 34677999999 5553 444433 346888999999999988
Q ss_pred eCC-CCeEEEeeCCCCceE--Eec-----CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 77 TGK-DNLLNAWRTPYGASI--FQS-----KESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 77 ~~~-~~~i~~w~~~~~~~~--~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+. ++.+..+|. +|+.+ ... .+......++..++|+++++...++.|..||.
T Consensus 94 ~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~ 153 (276)
T 3no2_A 94 WCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP 153 (276)
T ss_dssp EESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECT
T ss_pred ecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECC
Confidence 776 777888886 57765 111 11123455678899999999888899988874
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.36 E-value=1.3e-10 Score=69.83 Aligned_cols=127 Identities=11% Similarity=0.053 Sum_probs=93.9
Q ss_pred CEEEeCCCCceeeeecC--CCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCeEEee------ccccceEEEEEccCC
Q psy15612 1 MYLQSVSPGRQLQQHDF--SSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPDKYQLH------LHESCVLSLRFAACG 71 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~ 71 (131)
|+.||. +++.+..+.. ...+.++.+.|+|+.+++.+. ++.+..++.....+.++. .+...+..+...++|
T Consensus 58 V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G 136 (276)
T 3no2_A 58 AKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKG 136 (276)
T ss_dssp EEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTS
T ss_pred EEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCC
Confidence 467787 7888887743 346888999999999998877 777777776444333322 122345567788999
Q ss_pred CEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 72 KWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 72 ~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+++++...++.+..||.. |+.+........+..+...++++.+++++.++.|..+|.
T Consensus 137 ~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 137 NYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp CEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred CEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeC
Confidence 999999999999999988 888844333455667888899999988887777877764
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.36 E-value=2.3e-11 Score=81.14 Aligned_cols=128 Identities=8% Similarity=-0.034 Sum_probs=86.3
Q ss_pred CEEEeCCCCcee-eeecCCCCeEEEEECCCCCEEEEEeCCCc-------------EEEEeCCCCCe---EEe--eccccc
Q psy15612 1 MYLQSVSPGRQL-QQHDFSSQIFSLGYCPSGEWLAVGMENSN-------------VEVLHALKPDK---YQL--HLHESC 61 (131)
Q Consensus 1 i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-------------v~~~~~~~~~~---~~~--~~~~~~ 61 (131)
|++||+++++.+ ...-.......++|+|||+.|+.++.+.. |.+|++.++.. ... ..+...
T Consensus 149 i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~ 228 (695)
T 2bkl_A 149 LHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTT 228 (695)
T ss_dssp EEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTC
T ss_pred EEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEE
Confidence 579999998865 22111111267999999999999887665 99999987762 112 234457
Q ss_pred eEEEEEccCCCEEEEeCCCC----eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEec---CCCcEEEEEe
Q psy15612 62 VLSLRFAACGKWFVSTGKDN----LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGS---GDKKATVYEV 129 (131)
Q Consensus 62 v~~~~~~~~~~~~~~~~~~~----~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~vw~~ 129 (131)
+..+.|+|||++++..+.++ .+++++..+++...+..+...+....+ ++|.+++.+. .++.|.+||+
T Consensus 229 ~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~ 302 (695)
T 2bkl_A 229 FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDP 302 (695)
T ss_dssp EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBT
T ss_pred EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeC
Confidence 88999999999988776555 677777766665544445555556666 5556444444 2467888875
No 194
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.36 E-value=3.4e-10 Score=70.71 Aligned_cols=124 Identities=10% Similarity=-0.051 Sum_probs=84.7
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCCe-EEeecc-------ccce
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM----------ENSNVEVLHALKPDK-YQLHLH-------ESCV 62 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~-~~~~~~-------~~~v 62 (131)
|.++|..+++.+..+...... .++++|||+.++.+. .++.+.++|..+.+. ..+... ....
T Consensus 49 v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p 127 (373)
T 2mad_H 49 QWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYS 127 (373)
T ss_pred EEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCc
Confidence 468899999988777444444 999999999998875 356799999987764 333211 1245
Q ss_pred EEEEEccCCCEEEEeCC--CCeEEEeeCCCCceEEe-cCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEe
Q psy15612 63 LSLRFAACGKWFVSTGK--DNLLNAWRTPYGASIFQ-SKESSSVLSCDISADD-KYIVTGSGDKKATVYEV 129 (131)
Q Consensus 63 ~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~ 129 (131)
..+.|+|||++++.++. ++.|.++| .+++.... ...+.. +.+.|++ +.+++.+.|+++.++|.
T Consensus 128 ~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 128 WMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred cceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC
Confidence 68999999999998764 47899999 98887744 443332 3334443 33445556666666553
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.31 E-value=5.4e-10 Score=66.31 Aligned_cols=129 Identities=11% Similarity=0.015 Sum_probs=91.0
Q ss_pred CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|.+||.......... .....+..++++|+|+.+++...++.|.+++..+...... ......+..++++++|+.+++..
T Consensus 89 i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 89 VVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDT 168 (270)
T ss_dssp EEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEG
T ss_pred EEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEEC
Confidence 356676544332222 2335789999999998777766778899997665543222 22234578899999999777777
Q ss_pred CCCeEEEeeCCCCceEEe-cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 79 KDNLLNAWRTPYGASIFQ-SKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.++.|.+|+......... ......+..++++++|+++++...++.|.+||.
T Consensus 169 ~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 169 DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECT
T ss_pred CCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcC
Confidence 788999999887665432 233367889999999987777777888998874
No 196
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.31 E-value=1.4e-10 Score=72.53 Aligned_cols=93 Identities=13% Similarity=0.011 Sum_probs=71.2
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCCe-EEeecc-------ccce
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM----------ENSNVEVLHALKPDK-YQLHLH-------ESCV 62 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~-~~~~~~-------~~~v 62 (131)
|.+.|..+++.+..+....... +.++|||+.++.+. .++.|.+||..+.+. ..+... ....
T Consensus 61 V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P 139 (386)
T 3sjl_D 61 QFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYP 139 (386)
T ss_dssp EEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG
T ss_pred EEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCC
Confidence 4578999999888874333334 99999999887765 356799999999885 333221 1246
Q ss_pred EEEEEccCCCEEEEeCC--CCeEEEeeCCCCceE
Q psy15612 63 LSLRFAACGKWFVSTGK--DNLLNAWRTPYGASI 94 (131)
Q Consensus 63 ~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~ 94 (131)
..+.++|||++++.+.. ++.+.++|+.+++..
T Consensus 140 ~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 140 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK 173 (386)
T ss_dssp GGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred ceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEE
Confidence 68999999999888754 688999999999887
No 197
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.30 E-value=7.6e-10 Score=66.69 Aligned_cols=116 Identities=11% Similarity=0.131 Sum_probs=80.7
Q ss_pred EEeCCC-CceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC-CCCe----EEeeccccceEEEEEccCCCEEEE
Q psy15612 3 LQSVSP-GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL-KPDK----YQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 3 iwd~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~-~~~~----~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
+|.+.. ++..........+..++|+|+++.+++...++.|.+|++. .+.. ..+..+...+..++++++|+.+++
T Consensus 155 l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~ 234 (296)
T 3e5z_A 155 VFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWAS 234 (296)
T ss_dssp EEEECTTSCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEE
T ss_pred EEEECCCCCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEE
Confidence 444332 3333333555678899999999988666777899999986 4443 122223455678999999997666
Q ss_pred eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEE-CCCCCEEEEecCCC
Q psy15612 77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDI-SADDKYIVTGSGDK 122 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~-~~~~~~l~~~~~d~ 122 (131)
. ++.|.+|+.. ++.. ....+.. +.+++| +|+++.|++++.++
T Consensus 235 ~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 235 A--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp E--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred c--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence 6 7889999987 6655 3333444 889999 68988888777664
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.30 E-value=2.1e-10 Score=75.14 Aligned_cols=102 Identities=15% Similarity=0.157 Sum_probs=79.4
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC--CCceEEecCCCCCeEE
Q psy15612 28 PSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP--YGASIFQSKESSSVLS 105 (131)
Q Consensus 28 ~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~--~~~~~~~~~~~~~v~~ 105 (131)
|.+..+++...++.|.++|..+++..........+..+.|+|||+++++++.++.+.+||+. +++.......+.....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ 244 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS 244 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCce
Confidence 44456667777899999999998864333334456799999999999999999999999995 6766644444566789
Q ss_pred EEEC----CCCCEEEEecC-CCcEEEEEe
Q psy15612 106 CDIS----ADDKYIVTGSG-DKKATVYEV 129 (131)
Q Consensus 106 ~~~~----~~~~~l~~~~~-d~~i~vw~~ 129 (131)
++|+ |+|+++++++. ++++.++|.
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence 9999 69999887765 588999884
No 199
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.28 E-value=1.7e-10 Score=71.65 Aligned_cols=87 Identities=9% Similarity=0.115 Sum_probs=71.2
Q ss_pred EEECCCCCEEEEEeC-----------CCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612 24 LGYCPSGEWLAVGME-----------NSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG 91 (131)
Q Consensus 24 ~~~~~~~~~l~~~~~-----------~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 91 (131)
++++|+++.++.+.. ...|.+||+.+.+. ..+..+. +..++|+|||+++++++. +.+.+||..++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 688999888776543 34799999998886 4455555 899999999999998887 99999999999
Q ss_pred --ceEEe-cCCCCCeEEEEECCCCC
Q psy15612 92 --ASIFQ-SKESSSVLSCDISADDK 113 (131)
Q Consensus 92 --~~~~~-~~~~~~v~~~~~~~~~~ 113 (131)
+.+.. ...+.....++++|+|+
T Consensus 336 ~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 336 EPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SCEEEEEETTSCSSEEEEEECCCSC
T ss_pred cceeeEEeccCCCCcEEEEecCCCC
Confidence 77744 56788889999999986
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.27 E-value=2e-10 Score=77.18 Aligned_cols=127 Identities=14% Similarity=0.096 Sum_probs=84.2
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCc--------------EEEEeCCCCCe---EEeec--cccc
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSN--------------VEVLHALKPDK---YQLHL--HESC 61 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~--------------v~~~~~~~~~~---~~~~~--~~~~ 61 (131)
|++||+++++.+........+..++|+|| +.|+.+..+.. |.+|++.++.. ..... +...
T Consensus 191 i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~ 269 (741)
T 1yr2_A 191 VKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKR 269 (741)
T ss_dssp EEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTC
T ss_pred EEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeE
Confidence 57899999887654322222357899999 98888776543 88899876652 22222 2235
Q ss_pred eEEEEEccCCCEEEEeCCC-----CeEEEeeCCCC--c-eEEecCCCCCeEEEEECCCCCEEEEecC----CCcEEEEEe
Q psy15612 62 VLSLRFAACGKWFVSTGKD-----NLLNAWRTPYG--A-SIFQSKESSSVLSCDISADDKYIVTGSG----DKKATVYEV 129 (131)
Q Consensus 62 v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~--~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~vw~~ 129 (131)
+..+.|+|||++++..+.+ ..+++||+.++ + ...+..+....... ++|+|+.++..+. ++.|.+||+
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~ 348 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDL 348 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEEC
T ss_pred EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeC
Confidence 7899999999988876543 47999999877 4 44443444444444 3488888776654 345888875
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.24 E-value=1.8e-09 Score=65.31 Aligned_cols=121 Identities=10% Similarity=-0.016 Sum_probs=83.9
Q ss_pred CceeeeecCCCCeEEEEEC----CCCCEEEEE-eCCCcEEEEeCC-CCCe------EEeeccc-cceEEEEEccCCCEEE
Q psy15612 9 GRQLQQHDFSSQIFSLGYC----PSGEWLAVG-MENSNVEVLHAL-KPDK------YQLHLHE-SCVLSLRFAACGKWFV 75 (131)
Q Consensus 9 ~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~~~~v~~~~~~-~~~~------~~~~~~~-~~v~~~~~~~~~~~~~ 75 (131)
++.............++++ |+++.++.+ ..++.|.+|+.. .+.. ..+..+. ..+..++++++|+.++
T Consensus 162 g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v 241 (314)
T 1pjx_A 162 GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLV 241 (314)
T ss_dssp SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEE
T ss_pred CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEE
Confidence 4333333333456788999 999766555 457889999976 3332 1122222 5678899999999888
Q ss_pred EeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEE-EEecCCCcEEEEEe
Q psy15612 76 STGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYI-VTGSGDKKATVYEV 129 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~ 129 (131)
+...++.|..||..+++.. ....+...+.+++++|+++.+ ++...++.|..+++
T Consensus 242 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 242 ANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp EEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred EEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 7777889999999866655 333445788999999999955 45555678888875
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.23 E-value=6.3e-09 Score=62.90 Aligned_cols=125 Identities=13% Similarity=0.081 Sum_probs=82.4
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-----cccceEEEEEccCCCEEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-----HESCVLSLRFAACGKWFV 75 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~ 75 (131)
|+.||..+++. ..+.....+..++++|+|+++++ . +..|.+||..+++...+.. ....+.+++++|+|+.++
T Consensus 37 i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~ 113 (297)
T 3g4e_A 37 VCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFA 113 (297)
T ss_dssp EEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEE
T ss_pred EEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEE
Confidence 35677766554 33445678999999999995554 3 4579999998877544322 124578899999999766
Q ss_pred EeCC-----------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612 76 STGK-----------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV 129 (131)
Q Consensus 76 ~~~~-----------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~ 129 (131)
+... .+.+..++.. ++.............++|+|+++.++ +.+.++.|.+|++
T Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~ 178 (297)
T 3g4e_A 114 GTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDY 178 (297)
T ss_dssp EEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEE
T ss_pred ecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEec
Confidence 5422 2344444543 44333333345568899999998764 4555778988875
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.22 E-value=2e-08 Score=60.17 Aligned_cols=125 Identities=10% Similarity=-0.017 Sum_probs=89.7
Q ss_pred EEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe--eccccceEEEEEccCCCEEEEe
Q psy15612 2 YLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL--HLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 2 ~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
..||. +++..... .....+..+++++++...++...++.+..++. +++...+ ......+..+++.++|+..++.
T Consensus 123 ~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 123 GRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVE 200 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred EEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEc
Confidence 45565 44433222 23456899999999988777766788999998 6665433 2334568899999999987777
Q ss_pred CCCCeEEEeeCCCCceE-E-ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 78 GKDNLLNAWRTPYGASI-F-QSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~-~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
..++.+..|+. +++.. . .......+..++++++|++.++...++.|..||.
T Consensus 201 ~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 201 IIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred cCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 77889999999 67655 2 2234567899999999997776656778888874
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.21 E-value=1.2e-08 Score=63.84 Aligned_cols=66 Identities=11% Similarity=0.062 Sum_probs=48.5
Q ss_pred EEEccCCCEEEEeCC----------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCC-EEEEec-CCCcEEEEEee
Q psy15612 65 LRFAACGKWFVSTGK----------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDK-YIVTGS-GDKKATVYEVI 130 (131)
Q Consensus 65 ~~~~~~~~~~~~~~~----------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~vw~~~ 130 (131)
+.++|+++.++.... .+.|.++|..+++.+.....+....+++|+|+|+ .++++. .++.|.++|+.
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred EEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 456666666655432 3568889998888874444555789999999999 777776 48999999974
No 205
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.19 E-value=6.9e-09 Score=62.92 Aligned_cols=126 Identities=8% Similarity=-0.100 Sum_probs=84.4
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc-----ccceEEEEEccCCCEEEE
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH-----ESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~ 76 (131)
..|+. +++..........+..++++++|+++++...++.|..++.. +....+... ...+.++.+.|+|+.+++
T Consensus 70 ~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 70 LGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp EEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEE
T ss_pred EEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEe
Confidence 45665 34432222455678999999999977666566789999986 444333211 134678999999998775
Q ss_pred ----eCC-------------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC------CcEEEEEee
Q psy15612 77 ----TGK-------------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD------KKATVYEVI 130 (131)
Q Consensus 77 ----~~~-------------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~vw~~~ 130 (131)
+.. .+.|..+|..+++..... .......++|+|+++.++.+... +.|.+|++.
T Consensus 148 d~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 148 DPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp CCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEE
T ss_pred CcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec
Confidence 321 246788888777665333 44567889999999977666544 678888863
No 206
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.19 E-value=3e-08 Score=59.42 Aligned_cols=125 Identities=9% Similarity=0.049 Sum_probs=89.4
Q ss_pred EEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee--ccccceEEEEEccCCCEEEEe
Q psy15612 2 YLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH--LHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 2 ~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~ 77 (131)
.+||.. ++..... .....+..+++++++...++...++.+..|+.. +....+. .....+..+++.++|+.+++.
T Consensus 39 ~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 116 (299)
T 2z2n_A 39 SCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTE 116 (299)
T ss_dssp EEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred EEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEe
Confidence 456666 4433222 234678999999999887777667889999986 3433332 234578899999999988887
Q ss_pred CCCCeEEEeeCCCCceE-E-ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 78 GKDNLLNAWRTPYGASI-F-QSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~-~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
..++.+..||. +++.. . .......+..+++++++++.++...++.+..+|.
T Consensus 117 ~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 117 MNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred cCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 77889999998 56555 2 2234567899999999988777766677777763
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.18 E-value=9.1e-09 Score=62.24 Aligned_cols=126 Identities=8% Similarity=0.061 Sum_probs=84.8
Q ss_pred CEEEeCCCCceeeeec-----CCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCeEEe-ec-----cccceEEEEEc
Q psy15612 1 MYLQSVSPGRQLQQHD-----FSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDKYQL-HL-----HESCVLSLRFA 68 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~~~-~~-----~~~~v~~~~~~ 68 (131)
|..||..+++...... +...+..++++++ ++++++. ....|.+|+.. ++...+ .. ....+.+++++
T Consensus 48 i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d 125 (314)
T 1pjx_A 48 ILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFD 125 (314)
T ss_dssp EEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEEC
T ss_pred EEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEEC
Confidence 4567877776543322 4467899999999 6655544 44478899988 665443 21 12357899999
Q ss_pred cCCCEEEEeCCC---------------CeEEEeeCCCCceEEecCCCCCeEEEEEC----CCCCEEE-EecCCCcEEEEE
Q psy15612 69 ACGKWFVSTGKD---------------NLLNAWRTPYGASIFQSKESSSVLSCDIS----ADDKYIV-TGSGDKKATVYE 128 (131)
Q Consensus 69 ~~~~~~~~~~~~---------------~~i~~w~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~-~~~~d~~i~vw~ 128 (131)
++|+.+++...+ +.+..++.. ++.............++++ |+++.++ +...++.|.+||
T Consensus 126 ~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~ 204 (314)
T 1pjx_A 126 YEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYD 204 (314)
T ss_dssp TTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEE
Confidence 999987776654 567778766 5554333334456889999 9997654 445678899998
Q ss_pred e
Q psy15612 129 V 129 (131)
Q Consensus 129 ~ 129 (131)
+
T Consensus 205 ~ 205 (314)
T 1pjx_A 205 I 205 (314)
T ss_dssp E
T ss_pred C
Confidence 5
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.15 E-value=2.2e-08 Score=61.38 Aligned_cols=124 Identities=10% Similarity=-0.040 Sum_probs=83.3
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc-----ccceEEEEEccCCCEEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH-----ESCVLSLRFAACGKWFV 75 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~ 75 (131)
|..||.++++.. .+.....+.++.++|+++++++. .+ .+.+||..+++...+... ...+.++.++|+|+.++
T Consensus 73 i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v 149 (326)
T 2ghs_A 73 LHELHLASGRKT-VHALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWI 149 (326)
T ss_dssp EEEEETTTTEEE-EEECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEE
T ss_pred EEEEECCCCcEE-EEECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEE
Confidence 356777766543 33445679999999999877654 44 499999988776444321 23588999999999766
Q ss_pred EeCC------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEE-ecCCCcEEEEEe
Q psy15612 76 STGK------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVT-GSGDKKATVYEV 129 (131)
Q Consensus 76 ~~~~------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~vw~~ 129 (131)
+... .+.+..++ +++.............++|+|+++.++. .+.++.|.+||+
T Consensus 150 ~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~ 208 (326)
T 2ghs_A 150 GTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPL 208 (326)
T ss_dssp EEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEB
T ss_pred EeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEc
Confidence 5432 24566666 4554433233345678999999987654 455678988885
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.14 E-value=5.5e-09 Score=66.02 Aligned_cols=128 Identities=6% Similarity=-0.091 Sum_probs=86.0
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC--cEEEEeCCCCCe-EEe---ec-cccceEEEEEccCCCE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS--NVEVLHALKPDK-YQL---HL-HESCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~v~~~~~~~~~~-~~~---~~-~~~~v~~~~~~~~~~~ 73 (131)
|+.||.++++............ ++|+|+++.|+.+..++ .+..++...... ..+ .. ....+.+++++|++..
T Consensus 154 I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~ 232 (409)
T 3hrp_A 154 VRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEW 232 (409)
T ss_dssp EEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSE
T ss_pred EEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCe
Confidence 4678888776665543333334 99999999988887765 788888876543 222 12 4456788999995555
Q ss_pred EEEeCCCCeEEEeeCCCCceEEe-----cCCCCCe-E-EEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612 74 FVSTGKDNLLNAWRTPYGASIFQ-----SKESSSV-L-SCDISAD-DKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~~~-----~~~~~~v-~-~~~~~~~-~~~l~~~~~d~~i~vw~~ 129 (131)
++.+..++.|..||..++..... .+..... . .++|+|+ +.++++-..++.|..|+.
T Consensus 233 lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 233 LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred EEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 55577788899999987765422 2222222 3 8999995 555566666778888763
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.13 E-value=1.4e-09 Score=68.92 Aligned_cols=122 Identities=11% Similarity=-0.037 Sum_probs=84.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCCe-EEeecc-------ccce
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM----------ENSNVEVLHALKPDK-YQLHLH-------ESCV 62 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~-~~~~~~-------~~~v 62 (131)
|.++|..+++.+..+...... .+.++||++.++.+. .++.|.++|..+.+. ..+.-. ....
T Consensus 101 VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P 179 (426)
T 3c75_H 101 QFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQ 179 (426)
T ss_dssp EEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG
T ss_pred EEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCc
Confidence 467899999999888444444 899999999888775 356899999998885 333221 1345
Q ss_pred EEEEEccCCCEEEEeCC--CCeEEEeeCCCCceEEecCCCCC--------eEEEEECCCCCEEEEecCCCc
Q psy15612 63 LSLRFAACGKWFVSTGK--DNLLNAWRTPYGASIFQSKESSS--------VLSCDISADDKYIVTGSGDKK 123 (131)
Q Consensus 63 ~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~d~~ 123 (131)
..+.++|||++++.+.. ++.+.+.|..+++.+.....++. ..-+.++++|++++....+++
T Consensus 180 ~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 180 WMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp GGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTC
T ss_pred ceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCc
Confidence 68999999999988764 57899999999888722222111 122456666666654444443
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.13 E-value=3.5e-08 Score=62.39 Aligned_cols=128 Identities=11% Similarity=-0.036 Sum_probs=87.5
Q ss_pred CEEEeCCCCceeee----e-cCCCCe-E-EEEECCC-CCEEEEEeCCCcEEEEeCCCCCeEEeecc--------------
Q psy15612 1 MYLQSVSPGRQLQQ----H-DFSSQI-F-SLGYCPS-GEWLAVGMENSNVEVLHALKPDKYQLHLH-------------- 58 (131)
Q Consensus 1 i~iwd~~~~~~~~~----~-~~~~~v-~-~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-------------- 58 (131)
|+.||..++..... . +....- . .++|+|+ +.++++...++.|..|+.... ...+.++
T Consensus 242 I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~ 320 (409)
T 3hrp_A 242 FGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEA 320 (409)
T ss_dssp EEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGC
T ss_pred EEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCccccc
Confidence 35677776654322 1 111111 3 8999995 555555566788999987654 3233222
Q ss_pred -ccceEEEEEccCCCEEEEeC-CCCeEEEeeCCCCceEEecCC---------------CCCeEEEEECCCCCEEEEecCC
Q psy15612 59 -ESCVLSLRFAACGKWFVSTG-KDNLLNAWRTPYGASIFQSKE---------------SSSVLSCDISADDKYIVTGSGD 121 (131)
Q Consensus 59 -~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~~d 121 (131)
-..+..++++|+|+.+++-. .++.|+.|+..+++.....++ -..+..++++++++++++-..+
T Consensus 321 ~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n 400 (409)
T 3hrp_A 321 LFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWG 400 (409)
T ss_dssp BCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTT
T ss_pred EeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCC
Confidence 13478999999999777777 788999999877876533222 2468899999998888888888
Q ss_pred CcEEEEEe
Q psy15612 122 KKATVYEV 129 (131)
Q Consensus 122 ~~i~vw~~ 129 (131)
+.|+.+++
T Consensus 401 ~~Ir~i~~ 408 (409)
T 3hrp_A 401 KAIRKYAV 408 (409)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 88888775
No 212
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.11 E-value=7.7e-09 Score=67.66 Aligned_cols=127 Identities=11% Similarity=0.002 Sum_probs=91.5
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC--------------------------------------cEE
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS--------------------------------------NVE 43 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--------------------------------------~v~ 43 (131)
-+.|.++.+...++...+....++++|+|+++++++.+. .|.
T Consensus 178 tvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 467888888877774444566788999999998887553 367
Q ss_pred EEeCCC--CCe--EEeeccccceEEEEEccCCCEEEEeC-CCCeEEEeeCCCCc------------eEEecCCCCCeEEE
Q psy15612 44 VLHALK--PDK--YQLHLHESCVLSLRFAACGKWFVSTG-KDNLLNAWRTPYGA------------SIFQSKESSSVLSC 106 (131)
Q Consensus 44 ~~~~~~--~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~~~~------------~~~~~~~~~~v~~~ 106 (131)
+.|.++ +.. ..+. ....+.++.++|||++++.++ .++.+.++|..+.+ .......+.....+
T Consensus 258 VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~ 336 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHT 336 (595)
T ss_dssp EEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEE
T ss_pred EEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceE
Confidence 777776 322 2232 234567899999999877654 57889999998553 22344566789999
Q ss_pred EECCCCCEEEEecCCCcEEEEEe
Q psy15612 107 DISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 107 ~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+|+|+|...++...|+++.+||+
T Consensus 337 aF~~dG~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 337 AFDGRGNAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp EECTTSEEEEEETTTTEEEEEEH
T ss_pred EECCCCeEEEEEecCCcEEEEEh
Confidence 99999944455666999999996
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.09 E-value=1.4e-09 Score=68.08 Aligned_cols=105 Identities=8% Similarity=-0.037 Sum_probs=78.2
Q ss_pred EEECCCCCEEEEEeC-----CCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC----------CCCeEEEee
Q psy15612 24 LGYCPSGEWLAVGME-----NSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG----------KDNLLNAWR 87 (131)
Q Consensus 24 ~~~~~~~~~l~~~~~-----~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~~w~ 87 (131)
....|+++.++.... ++.|.++|..+.+. ..+.....+ . +.++|||+.++.++ .++.+.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 444789998888765 57899999998886 444433333 4 99999999887765 357799999
Q ss_pred CCCCceEE--ecCC------CCCeEEEEECCCCCEEEEecC--CCcEEEEEee
Q psy15612 88 TPYGASIF--QSKE------SSSVLSCDISADDKYIVTGSG--DKKATVYEVI 130 (131)
Q Consensus 88 ~~~~~~~~--~~~~------~~~v~~~~~~~~~~~l~~~~~--d~~i~vw~~~ 130 (131)
..+.+... ..+. ......++++|+|++++.+.. ++.|.++|+.
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~ 168 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE 168 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC
Confidence 99988772 2221 235678999999999887763 6789999863
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.07 E-value=1.9e-07 Score=55.94 Aligned_cols=124 Identities=10% Similarity=0.052 Sum_probs=87.8
Q ss_pred EEEeCCCCceeee-e-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee--ccccceEEEEEccCCCEEEEe
Q psy15612 2 YLQSVSPGRQLQQ-H-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH--LHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 2 ~iwd~~~~~~~~~-~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~ 77 (131)
.+||.. ++.... + .....+..+++.+++...++...++.|..+|.. ++...+. .....+..+++.++|+.+++.
T Consensus 44 ~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 121 (300)
T 2qc5_A 44 SSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQ 121 (300)
T ss_dssp EEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred EEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEc
Confidence 455655 443322 1 223578899999999877776667889999987 5543332 234568899999999988887
Q ss_pred CCCCeEEEeeCCCCceE-Ee-cCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 78 GKDNLLNAWRTPYGASI-FQ-SKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~-~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
..++.+..++.. ++.. .. ......+..+++.+++++.++...++.|..+|
T Consensus 122 ~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 122 LNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp TTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred cCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 778889999987 6655 22 22456789999999999776666567777765
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.06 E-value=1.5e-07 Score=57.74 Aligned_cols=127 Identities=16% Similarity=0.119 Sum_probs=83.0
Q ss_pred CEEEeCCCCceeeeecC-----CCCeEEEEECCCCCEEEEEeC------CCcEEEEeCCCCCeEEeeccccceEEEEEcc
Q psy15612 1 MYLQSVSPGRQLQQHDF-----SSQIFSLGYCPSGEWLAVGME------NSNVEVLHALKPDKYQLHLHESCVLSLRFAA 69 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (131)
|.+||.++++....... ...+..+.++|+|++.++... .+.|..++ .++...+.........++|+|
T Consensus 111 l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~ 188 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSP 188 (326)
T ss_dssp EEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECT
T ss_pred EEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcC
Confidence 46788877775433321 235889999999997665432 24466666 444443333334567899999
Q ss_pred CCCEEEEe-CCCCeEEEeeCC--CC-ce----EE--ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 70 CGKWFVST-GKDNLLNAWRTP--YG-AS----IF--QSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 70 ~~~~~~~~-~~~~~i~~w~~~--~~-~~----~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+++.++.+ +.++.|.+|+.. ++ +. .. .......+..++++++|++.++...++.|..||.
T Consensus 189 dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 189 DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 99876544 567889999985 55 32 11 1123456788999999987776655677887764
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.05 E-value=3e-09 Score=71.20 Aligned_cols=110 Identities=11% Similarity=0.251 Sum_probs=75.1
Q ss_pred CCeEEEEECCCCCEEEEEe-----CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCC------------
Q psy15612 19 SQIFSLGYCPSGEWLAVGM-----ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDN------------ 81 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------ 81 (131)
..+..+.|||||+.++.+. ....|+++|+.+++.............++|+ |++.|+.++.+.
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~ 207 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ 207 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence 3578899999999988542 2356999999998864332221123578899 999888776653
Q ss_pred -eEEEeeCCCCce---E-Eec-C-CCCCeEEEEECCCCCEEEEecC----CCcEEEEEe
Q psy15612 82 -LLNAWRTPYGAS---I-FQS-K-ESSSVLSCDISADDKYIVTGSG----DKKATVYEV 129 (131)
Q Consensus 82 -~i~~w~~~~~~~---~-~~~-~-~~~~v~~~~~~~~~~~l~~~~~----d~~i~vw~~ 129 (131)
.|++|++.++.. + ... . +......+.|+|+|++++.... +..+.++|+
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 266 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDL 266 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEET
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEEC
Confidence 389999887653 2 222 1 2445788999999998754332 247788775
No 217
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.04 E-value=2.6e-07 Score=55.32 Aligned_cols=125 Identities=10% Similarity=0.046 Sum_probs=87.6
Q ss_pred EEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe--eccccceEEEEEccCCCEEEEe
Q psy15612 2 YLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL--HLHESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 2 ~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~ 77 (131)
..+|.. ++..... .....+..+++.++++..++...++.+..++.. ++...+ ......+..+++.++|+..++.
T Consensus 86 ~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 86 GKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp EEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred EEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEe
Confidence 455655 4443221 234668999999999887777667889999987 554332 2234568899999999977777
Q ss_pred CCCCeEEEeeCCCCceE-Ee-cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 78 GKDNLLNAWRTPYGASI-FQ-SKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~-~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
..++.+..++. +++.. .. ......+..+++++++++.++....+.|.++|.
T Consensus 164 ~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 164 NQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred cCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC
Confidence 66788999998 56655 22 234467889999999987777666667877763
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.03 E-value=6.2e-08 Score=58.58 Aligned_cols=103 Identities=12% Similarity=0.036 Sum_probs=74.5
Q ss_pred cCCCCeEEEEECCCCCEEEE-EeCCCcEEEEeC--CCCCeE---E---eeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612 16 DFSSQIFSLGYCPSGEWLAV-GMENSNVEVLHA--LKPDKY---Q---LHLHESCVLSLRFAACGKWFVSTGKDNLLNAW 86 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~-~~~~~~v~~~~~--~~~~~~---~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w 86 (131)
........++|+|+++.++. ...++.|..|++ .++... . +......+..+++.++|+..++....+.|..|
T Consensus 146 ~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~ 225 (297)
T 3g4e_A 146 DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRL 225 (297)
T ss_dssp EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEE
T ss_pred eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEE
Confidence 33345678999999987654 455678999987 444431 1 12234567899999999887777777889999
Q ss_pred eCCCCceE-EecCCCCCeEEEEEC-CCCCEEEEe
Q psy15612 87 RTPYGASI-FQSKESSSVLSCDIS-ADDKYIVTG 118 (131)
Q Consensus 87 ~~~~~~~~-~~~~~~~~v~~~~~~-~~~~~l~~~ 118 (131)
|..+++.+ ....+...+.+++|. |+++.|+.+
T Consensus 226 d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 226 DPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp CTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEE
T ss_pred cCCCceEEEEEECCCCCceEEEEeCCCCCEEEEE
Confidence 99988887 444445789999998 787766543
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.01 E-value=2.3e-08 Score=60.60 Aligned_cols=116 Identities=8% Similarity=0.044 Sum_probs=74.5
Q ss_pred EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC------CcEEEEeCCCCCeE---Ee-eccccceEEEEEccCCC
Q psy15612 3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN------SNVEVLHALKPDKY---QL-HLHESCVLSLRFAACGK 72 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------~~v~~~~~~~~~~~---~~-~~~~~~v~~~~~~~~~~ 72 (131)
.+|.++++..... .......++|+|+++.|+.+... +.|..|++...... .+ ......+..+++.++|+
T Consensus 173 ~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~ 251 (305)
T 3dr2_A 173 RLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW 251 (305)
T ss_dssp EECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC
T ss_pred EEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC
Confidence 4454445443333 33456789999999988777654 67999998654321 11 11234456788999999
Q ss_pred EEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCC
Q psy15612 73 WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDK 122 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 122 (131)
..++ .. +.|.+|+.. ++.+.....+..+.+++|+|+++.|..++.++
T Consensus 252 lwv~-~~-~gv~~~~~~-g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 252 LWSS-SG-TGVCVFDSD-GQLLGHIPTPGTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp EEEC-CS-SEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEEEETTE
T ss_pred EEEe-cC-CcEEEECCC-CCEEEEEECCCceeEEEEeCCCCEEEEEcCCe
Confidence 5544 43 458999984 66552222333688999999988887766654
No 220
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.00 E-value=9.6e-08 Score=57.03 Aligned_cols=127 Identities=10% Similarity=0.031 Sum_probs=87.6
Q ss_pred CEEEeCCCCceeeeecCC-CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeec--cc---cceEEEEEccCCCE
Q psy15612 1 MYLQSVSPGRQLQQHDFS-SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHL--HE---SCVLSLRFAACGKW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~--~~---~~v~~~~~~~~~~~ 73 (131)
+.++|..+.+.+..+... ..- +.+++||+.++.+..++++.++|..+.+. ..+.. .. ..+..+.|. +|..
T Consensus 88 v~viD~~t~~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp EEEEETTTTEEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCCCcEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE
Confidence 357898888888877433 222 33556888777777788999999998775 33321 11 235678887 7766
Q ss_pred EEEeCCCCeEEEeeCCCCceEEecC--------------CCCCeEEEEECCCCCEE-EEecCCCcEEEEEee
Q psy15612 74 FVSTGKDNLLNAWRTPYGASIFQSK--------------ESSSVLSCDISADDKYI-VTGSGDKKATVYEVI 130 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~~ 130 (131)
.+.....+.|.+.|..+++...... .......++++|+++.+ +++....++.+.++.
T Consensus 165 yvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 165 WANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp EEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred EEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 6666668899999999999872111 11466899999998765 455567778777663
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.94 E-value=4.1e-08 Score=65.81 Aligned_cols=127 Identities=7% Similarity=0.037 Sum_probs=80.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC-------------cEEEEeCCCCCe--EEe---ec-cccc
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS-------------NVEVLHALKPDK--YQL---HL-HESC 61 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-------------~v~~~~~~~~~~--~~~---~~-~~~~ 61 (131)
|+++|+++++.+...-.......++|+ |++.|+.+..+. .|.+|++.+... ..+ .. +...
T Consensus 157 i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~ 235 (693)
T 3iuj_A 157 IHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHR 235 (693)
T ss_dssp EEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCS
T ss_pred EEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeE
Confidence 578999999876542111113567899 999998887763 389999877652 222 22 3345
Q ss_pred eEEEEEccCCCEEEEeC----CCCeEEEeeCCCCc--eEEecCCCCCeEEEEECCCCCEEE-EecCC---CcEEEEEe
Q psy15612 62 VLSLRFAACGKWFVSTG----KDNLLNAWRTPYGA--SIFQSKESSSVLSCDISADDKYIV-TGSGD---KKATVYEV 129 (131)
Q Consensus 62 v~~~~~~~~~~~~~~~~----~~~~i~~w~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d---~~i~vw~~ 129 (131)
...+.|+|||++++... ..+.++++|+.++. ...+..+....... +++++..++ .+..+ +.|..+|+
T Consensus 236 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~ 312 (693)
T 3iuj_A 236 YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDA 312 (693)
T ss_dssp EEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEET
T ss_pred EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeC
Confidence 67899999999875432 23579999987763 33444444444444 566666554 44333 45766664
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.92 E-value=1.1e-07 Score=60.52 Aligned_cols=129 Identities=15% Similarity=0.095 Sum_probs=88.1
Q ss_pred CEEEeCCCCceeeeecCC----CCeEEEEECCCCCEEEEEe-------------------CCCcEEEEeCCCCCe-EEee
Q psy15612 1 MYLQSVSPGRQLQQHDFS----SQIFSLGYCPSGEWLAVGM-------------------ENSNVEVLHALKPDK-YQLH 56 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~-------------------~~~~v~~~~~~~~~~-~~~~ 56 (131)
|.+.|.++++.+..+... .--+.+.|+|+++.+++.. ...+|.+||+.+++. .++.
T Consensus 166 v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 166 ILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp EEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence 357888888888877322 2245688899999888874 367899999988764 3333
Q ss_pred c--cccceEEEEE--ccCCCEEEEeCC------CCeEEEeeCCCCceE--Ee--cCC-----------------CCCeEE
Q psy15612 57 L--HESCVLSLRF--AACGKWFVSTGK------DNLLNAWRTPYGASI--FQ--SKE-----------------SSSVLS 105 (131)
Q Consensus 57 ~--~~~~v~~~~~--~~~~~~~~~~~~------~~~i~~w~~~~~~~~--~~--~~~-----------------~~~v~~ 105 (131)
. .......+.| +|++++.+.++. ++.|.+|....++.. .. ... ...+..
T Consensus 246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~ 325 (462)
T 2ece_A 246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTD 325 (462)
T ss_dssp SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCC
T ss_pred cCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeE
Confidence 2 2234566666 999998877664 557777665544332 10 000 245788
Q ss_pred EEECCCCCEEEEecC-CCcEEEEEe
Q psy15612 106 CDISADDKYIVTGSG-DKKATVYEV 129 (131)
Q Consensus 106 ~~~~~~~~~l~~~~~-d~~i~vw~~ 129 (131)
+.++++|++|+++.. .+.|.++|+
T Consensus 326 I~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 326 IDISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEe
Confidence 999999999977665 678999986
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.87 E-value=9.3e-08 Score=58.98 Aligned_cols=101 Identities=9% Similarity=0.027 Sum_probs=69.9
Q ss_pred CeEEEEECCCCCEEEEEeCCC-cEEEEeCC---CCCe--------EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612 20 QIFSLGYCPSGEWLAVGMENS-NVEVLHAL---KPDK--------YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR 87 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~-~v~~~~~~---~~~~--------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~ 87 (131)
.+..++++|+++.|+.+...+ .+..++.. .... ....++...+..++++++|+.+++...++.|.+||
T Consensus 196 ~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEE
Confidence 368899999999888876655 45555432 1110 01122334566799999999888888899999999
Q ss_pred CCCCceEEec--CCCCCeEEEEECCCCCEEEEecC
Q psy15612 88 TPYGASIFQS--KESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 88 ~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
..+++..... .....+..+++.++++++++.+.
T Consensus 276 ~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 276 SADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp TTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred CCCCCEEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 8567654222 23466899999999988777654
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.86 E-value=9.3e-08 Score=58.96 Aligned_cols=129 Identities=9% Similarity=-0.010 Sum_probs=83.7
Q ss_pred CEEEeCCCCceeeeecC-------CCCeEEEEECCCCCEE-EEEe---CCCcEEEEeCCCCCeEE-eecc----------
Q psy15612 1 MYLQSVSPGRQLQQHDF-------SSQIFSLGYCPSGEWL-AVGM---ENSNVEVLHALKPDKYQ-LHLH---------- 58 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l-~~~~---~~~~v~~~~~~~~~~~~-~~~~---------- 58 (131)
|.+||+.+++.+..+.. ...+..++++|++..+ ++.. .++.|.+||+.+++... +..|
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 45789888887665522 1346889999865554 4444 56789999998766433 2111
Q ss_pred -------------------ccceEEEEEccCCCEEEEeCCCC-eEEEeeCC---CCce--------EEecCCCCCeEEEE
Q psy15612 59 -------------------ESCVLSLRFAACGKWFVSTGKDN-LLNAWRTP---YGAS--------IFQSKESSSVLSCD 107 (131)
Q Consensus 59 -------------------~~~v~~~~~~~~~~~~~~~~~~~-~i~~w~~~---~~~~--------~~~~~~~~~v~~~~ 107 (131)
...+..++|+|+|+.++.+...+ .+..++.. .+.. ....++.+....++
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia 254 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGIS 254 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEE
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEE
Confidence 02357899999999887775554 55555431 1110 01112234566789
Q ss_pred ECCCCCEEEEecCCCcEEEEEe
Q psy15612 108 ISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 108 ~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++++|+++++...++.|.+||.
T Consensus 255 ~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 255 IDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp ECTTCCEEEEEGGGTEEEEEET
T ss_pred ECCCCCEEEEccCCCeEEEEEC
Confidence 9999998888888889999985
No 225
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.86 E-value=1.8e-07 Score=61.35 Aligned_cols=129 Identities=14% Similarity=0.075 Sum_probs=89.7
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEE-C-CCCCEEEEEeC------------------CCcEEEEeCCCCCe-EEeec
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGY-C-PSGEWLAVGME------------------NSNVEVLHALKPDK-YQLHL 57 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~-~-~~~~~l~~~~~------------------~~~v~~~~~~~~~~-~~~~~ 57 (131)
|.+.|+.+.++...+ .....+-.+++ + |+++++++++. ++.+.+.|..+.+. .++.-
T Consensus 114 VavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~V 193 (595)
T 1fwx_A 114 VARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLV 193 (595)
T ss_dssp EEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEe
Confidence 356788888887744 44566888887 5 99999888742 34688899988775 33332
Q ss_pred cccceEEEEEccCCCEEEEeCCCC--------------------------------------eEEEeeCCC--Cce-EEe
Q psy15612 58 HESCVLSLRFAACGKWFVSTGKDN--------------------------------------LLNAWRTPY--GAS-IFQ 96 (131)
Q Consensus 58 ~~~~v~~~~~~~~~~~~~~~~~~~--------------------------------------~i~~w~~~~--~~~-~~~ 96 (131)
. .....++.+|+|+++++++.+. .+.+.|..+ ++. +..
T Consensus 194 g-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~ 272 (595)
T 1fwx_A 194 S-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRY 272 (595)
T ss_dssp S-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEE
T ss_pred C-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEE
Confidence 2 2456788999999988876543 366666665 333 223
Q ss_pred cCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEee
Q psy15612 97 SKESSSVLSCDISADDKYIVTGS-GDKKATVYEVI 130 (131)
Q Consensus 97 ~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~ 130 (131)
...+....++.++|||++++.++ .+.++.++|+.
T Consensus 273 Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~ 307 (595)
T 1fwx_A 273 IPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT 307 (595)
T ss_dssp EEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred EecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECc
Confidence 33345667899999999887665 47889999864
No 226
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.83 E-value=3.5e-06 Score=53.72 Aligned_cols=128 Identities=8% Similarity=0.020 Sum_probs=82.9
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC-C----cEEEEeCCCCCe--EEeeccccceEEEEEcc-CCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN-S----NVEVLHALKPDK--YQLHLHESCVLSLRFAA-CGK 72 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~----~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~ 72 (131)
|+.+|.++++.............++++++++.|+.+... + .+..++...... ..+. ....+..++++| +|.
T Consensus 161 I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~-~~~~p~giavdp~~g~ 239 (430)
T 3tc9_A 161 TRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT-KGQNCNGAETHPINGE 239 (430)
T ss_dssp EEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE-ECSSCCCEEECTTTCC
T ss_pred EEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec-cCCCceEEEEeCCCCE
Confidence 456777766554444555678999999999966666542 1 233344433221 2222 234467888999 677
Q ss_pred EEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612 73 WFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV 129 (131)
Q Consensus 73 ~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~ 129 (131)
.+++-...+.|..++..++... ...........++|+|++++++ +-...+.|..++.
T Consensus 240 lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 240 LYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence 6666667788999999877653 2333345678999999999554 4445677888764
No 227
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.82 E-value=2e-08 Score=62.65 Aligned_cols=88 Identities=13% Similarity=-0.056 Sum_probs=67.5
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCCe-EEeecc-------ccceE
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM----------ENSNVEVLHALKPDK-YQLHLH-------ESCVL 63 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~-~~~~~~-------~~~v~ 63 (131)
.+.|..+++.+..+...... .+.++||++.++.+. .++.|.++|+.+.+. ..+... .....
T Consensus 49 svID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~ 127 (368)
T 1mda_H 49 WVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVH 127 (368)
T ss_dssp EEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTT
T ss_pred EEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcc
Confidence 47899999999888433334 799999999988876 367899999999886 444322 13467
Q ss_pred EEEEccCCCEEEEeCC--CCeEEE--eeCCC
Q psy15612 64 SLRFAACGKWFVSTGK--DNLLNA--WRTPY 90 (131)
Q Consensus 64 ~~~~~~~~~~~~~~~~--~~~i~~--w~~~~ 90 (131)
.+.++|||++++.+.. .+.+.+ +|..+
T Consensus 128 ~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 128 IIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred eEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 8999999999988764 466888 99876
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.80 E-value=8.2e-11 Score=73.31 Aligned_cols=124 Identities=10% Similarity=0.027 Sum_probs=60.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eeecccc-ceE-EEEEccCCCEEEEe
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLHLHES-CVL-SLRFAACGKWFVST 77 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~-~v~-~~~~~~~~~~~~~~ 77 (131)
|+.||.++|+.+..+.. +.+.+..+.+++..++.++.++.+..||..+++.. ....+.. .+. ..... ++..++++
T Consensus 21 v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g 98 (369)
T 2hz6_A 21 LHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMG 98 (369)
T ss_dssp EEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCC
T ss_pred EEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEE
Confidence 46899999999887754 55555555567777777789999999999877642 2221111 110 00111 34456777
Q ss_pred CCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 78 GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+.++.+..||..+|+.+....... ...++|++..+++++.|+.+..||.
T Consensus 99 ~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~ 147 (369)
T 2hz6_A 99 KKQDIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDT 147 (369)
T ss_dssp EEEEEEEEECCC-------------------------EEEEEEEEEEECCCS
T ss_pred eCCCEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEEC
Confidence 788999999999998873222221 1345667788888888888888875
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.80 E-value=1.2e-06 Score=55.99 Aligned_cols=127 Identities=10% Similarity=0.140 Sum_probs=83.6
Q ss_pred CEEEeCCCC----ceeeeec-------CC-CCeEEEEECCCCCEEEEEeCC------CcEEEEeCCCCCeE-Eeec--c-
Q psy15612 1 MYLQSVSPG----RQLQQHD-------FS-SQIFSLGYCPSGEWLAVGMEN------SNVEVLHALKPDKY-QLHL--H- 58 (131)
Q Consensus 1 i~iwd~~~~----~~~~~~~-------~~-~~v~~~~~~~~~~~l~~~~~~------~~v~~~~~~~~~~~-~~~~--~- 58 (131)
|+++|+.+. +..+.+. .. ...-.+...|+| .++++..+ +.+.++|..+.++. +... .
T Consensus 108 I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~ 186 (462)
T 2ece_A 108 IYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGD 186 (462)
T ss_dssp EEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTT
T ss_pred EEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCC
Confidence 567887644 4444442 11 245567788999 66665444 67999999988863 3321 1
Q ss_pred ccceEEEEEccCCCEEEEeC-------------------CCCeEEEeeCCCCceEEe--cC-CCCCeEEEEE--CCCCCE
Q psy15612 59 ESCVLSLRFAACGKWFVSTG-------------------KDNLLNAWRTPYGASIFQ--SK-ESSSVLSCDI--SADDKY 114 (131)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~-------------------~~~~i~~w~~~~~~~~~~--~~-~~~~v~~~~~--~~~~~~ 114 (131)
....+++.|+|+++.++++. ....|.+||+.+++.... .+ .......+.| +|++++
T Consensus 187 ~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~ 266 (462)
T 2ece_A 187 QYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLM 266 (462)
T ss_dssp CCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCE
T ss_pred ccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCE
Confidence 12345688999999888885 368899999998876622 22 2245566666 999998
Q ss_pred EEEecC------CCcEEEEE
Q psy15612 115 IVTGSG------DKKATVYE 128 (131)
Q Consensus 115 l~~~~~------d~~i~vw~ 128 (131)
++.++. +++|.+|.
T Consensus 267 aYV~~e~~~~~Lss~V~v~~ 286 (462)
T 2ece_A 267 GFINMVVSLKDLSSSIWLWF 286 (462)
T ss_dssp EEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEeeeccCCCceEEEEE
Confidence 877664 45665543
No 230
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.79 E-value=6.8e-08 Score=61.35 Aligned_cols=100 Identities=9% Similarity=0.004 Sum_probs=73.4
Q ss_pred CCCCEEEEEeCC-----CcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC----------CCCeEEEeeCCCC
Q psy15612 28 PSGEWLAVGMEN-----SNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG----------KDNLLNAWRTPYG 91 (131)
Q Consensus 28 ~~~~~l~~~~~~-----~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~~w~~~~~ 91 (131)
|+++.++..... +.|.++|..+.+. ..+..-.. . .+.++|||+.++.+. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~-P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL-P-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS-C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC-C-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 466766665542 5899999999886 44443333 3 899999999888775 3678999999999
Q ss_pred ceEE--ecC------CCCCeEEEEECCCCCEEEEecC--CCcEEEEEe
Q psy15612 92 ASIF--QSK------ESSSVLSCDISADDKYIVTGSG--DKKATVYEV 129 (131)
Q Consensus 92 ~~~~--~~~------~~~~v~~~~~~~~~~~l~~~~~--d~~i~vw~~ 129 (131)
+... ..+ .......+.++|+|++++.+.. ++.|.+.|+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~ 207 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDL 207 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEET
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEEC
Confidence 8872 222 1244678999999999988764 578988886
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.79 E-value=6.1e-07 Score=53.31 Aligned_cols=117 Identities=9% Similarity=0.115 Sum_probs=80.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeec--cc---cceEEEEEccCCCEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHL--HE---SCVLSLRFAACGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~--~~---~~v~~~~~~~~~~~~ 74 (131)
+.+||.++.+.+..+.....-..+ +++++.|+....++++.++|..+.+. ..+.. .. ..+..+.|. +|+..
T Consensus 109 v~v~D~~t~~~~~ti~~~~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ly 185 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDGEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIF 185 (262)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEEECccCcEEEEEECCCCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEE
Confidence 357899999998888544432333 35777777766678899999998875 33322 11 234557776 78766
Q ss_pred EEeCCCCeEEEeeCCCCceEE-e-c-----------CCCCCeEEEEECCCCCEEEEecC
Q psy15612 75 VSTGKDNLLNAWRTPYGASIF-Q-S-----------KESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~~~~-~-~-----------~~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
+..-.++.|.+.|..+++.+. . . ........++++|+++.|+.++.
T Consensus 186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 666678899999999999871 1 1 01245689999998887766654
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.78 E-value=5.5e-07 Score=53.79 Aligned_cols=124 Identities=10% Similarity=-0.043 Sum_probs=80.1
Q ss_pred CEEEeCCCCceeeeecCCC--CeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSS--QIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS 76 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~ 76 (131)
|++.|+++++.+..+.... ....+++. +..+ ++...++.+.++|..+.+. .++..... ....+++||+.++.
T Consensus 46 v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~v 121 (266)
T 2iwa_A 46 VRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYG 121 (266)
T ss_dssp EEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEE
T ss_pred EEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEE
Confidence 4678999999887763322 22344443 4454 4455678899999998775 34432212 23446678887777
Q ss_pred eCCCCeEEEeeCCCCceEEec--C-CC---CCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 77 TGKDNLLNAWRTPYGASIFQS--K-ES---SSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~~~~--~-~~---~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+..++.+.++|..+.+..... + .+ ..+..+.|. +++..+....++.|.+.|.
T Consensus 122 s~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 122 SDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISA 179 (266)
T ss_dssp ECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEET
T ss_pred ECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEEC
Confidence 777889999999988776221 1 11 246677887 6665555555678888775
No 233
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.78 E-value=1.2e-06 Score=52.11 Aligned_cols=116 Identities=9% Similarity=0.020 Sum_probs=80.1
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEee--cccc---ceEEEEEccCCCEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLH--LHES---CVLSLRFAACGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~--~~~~---~v~~~~~~~~~~~~ 74 (131)
+.+||.++.+.+..+.....-..++ ++++.|+....++++.++|..+.+. ..+. .... .+..+.|. +|+.+
T Consensus 118 v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ly 194 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIY 194 (268)
T ss_dssp EEEEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEE
Confidence 3578999999998885444333343 5788888777788999999998875 3332 2222 34567776 77766
Q ss_pred EEeCCCCeEEEeeCCCCceEE-e-c------------CCCCCeEEEEECCCCCEEEEec
Q psy15612 75 VSTGKDNLLNAWRTPYGASIF-Q-S------------KESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~~~~-~-~------------~~~~~v~~~~~~~~~~~l~~~~ 119 (131)
+..-..+.|.+.|..+++.+. . . ........+|++|+++.|+.++
T Consensus 195 anvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 195 ANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 666678899999999999871 1 1 1224678999999766555444
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.67 E-value=1.7e-06 Score=51.48 Aligned_cols=125 Identities=9% Similarity=0.073 Sum_probs=79.8
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE-EeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV-GMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|+.+|+++++.+..+............+++..|.. ...++.+.++|..+.+. .++.. .. ....+++|++.++.+.
T Consensus 67 v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~-~~--eG~glt~dg~~L~~Sd 143 (262)
T 3nol_A 67 IRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNY-DG--EGWGLTHNDQYLIMSD 143 (262)
T ss_dssp EEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEEC-SS--CCCCEEECSSCEEECC
T ss_pred EEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEEC-CC--CceEEecCCCEEEEEC
Confidence 47789999999888754444444333344555544 45688899999998886 33432 22 2234456788777777
Q ss_pred CCCeEEEeeCCCCceEEe--c-CCC---CCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 79 KDNLLNAWRTPYGASIFQ--S-KES---SSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~--~-~~~---~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
..+.+.++|..+.+.... . ..+ ..+..+.|. +|+..+....++.|.+.|.
T Consensus 144 Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp 199 (262)
T 3nol_A 144 GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDP 199 (262)
T ss_dssp SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECT
T ss_pred CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEEC
Confidence 788899999998887721 1 111 334456765 6665555545667776654
No 235
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.67 E-value=7.4e-06 Score=48.26 Aligned_cols=117 Identities=6% Similarity=0.093 Sum_probs=80.3
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeec--cc---cceEEEEEccCCCEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHL--HE---SCVLSLRFAACGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~--~~---~~v~~~~~~~~~~~~ 74 (131)
+.+||.++.+.+..+.....-..++ ++++.|+....++.|.++|..+.+. ..+.. +. ..+..+.+. +|+.+
T Consensus 87 v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ly 163 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELL 163 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEE
Confidence 3578999999998885444434444 5677777777788999999998875 33322 21 234566665 67766
Q ss_pred EEeCCCCeEEEeeCCCCceE-Eec-------------CCCCCeEEEEECCCCCEEEEecC
Q psy15612 75 VSTGKDNLLNAWRTPYGASI-FQS-------------KESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~~~-~~~-------------~~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
+..-..+.|.+.|..+|+.+ ... ........++++|+++.|+..+.
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 66666889999999999987 111 12245689999998776655543
No 236
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.64 E-value=5.9e-07 Score=60.25 Aligned_cols=130 Identities=10% Similarity=0.075 Sum_probs=85.4
Q ss_pred CEEEeCCCCceeeeec---CC-------CCeEEEEECCCC---CEEEEEeCCCcEEEEeCCCCCeEE-eecc--------
Q psy15612 1 MYLQSVSPGRQLQQHD---FS-------SQIFSLGYCPSG---EWLAVGMENSNVEVLHALKPDKYQ-LHLH-------- 58 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~---~~-------~~v~~~~~~~~~---~~l~~~~~~~~v~~~~~~~~~~~~-~~~~-------- 58 (131)
|..+|.++|+.+..+. +. ..........+| ..++.++.++.+.++|..+++... ....
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY 364 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence 3567888998887652 21 122333334467 578888999999999999888521 1100
Q ss_pred ---ccce------------------------EEEEEccCCCEEEEeCC--------------------------------
Q psy15612 59 ---ESCV------------------------LSLRFAACGKWFVSTGK-------------------------------- 79 (131)
Q Consensus 59 ---~~~v------------------------~~~~~~~~~~~~~~~~~-------------------------------- 79 (131)
...+ ..++++|+...+++...
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 0001 14688898887766432
Q ss_pred -----------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 80 -----------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 80 -----------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.+.+..||+.+++.+....+...+....+...+..++.++.|+.+++||+.
T Consensus 445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp EECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred ccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence 167999999999988333334444445566677888888899999999863
No 237
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.63 E-value=1.3e-07 Score=59.11 Aligned_cols=87 Identities=9% Similarity=-0.166 Sum_probs=64.5
Q ss_pred cEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC----------CCCeEEEeeCCCCceEEe--cC--C----CC
Q psy15612 41 NVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG----------KDNLLNAWRTPYGASIFQ--SK--E----SS 101 (131)
Q Consensus 41 ~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~~w~~~~~~~~~~--~~--~----~~ 101 (131)
.+.++|..+.+. .++.....+ .+.++||++.++.+. .++.+.+||..+++.... .+ . ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 788999998886 444433333 799999999888775 467899999999998822 22 1 13
Q ss_pred CeEEEEECCCCCEEEEecC--CCcEEE--EEe
Q psy15612 102 SVLSCDISADDKYIVTGSG--DKKATV--YEV 129 (131)
Q Consensus 102 ~v~~~~~~~~~~~l~~~~~--d~~i~v--w~~ 129 (131)
....++++|+|++++.+.. +..+.+ +|+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~ 156 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGA 156 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTT
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEch
Confidence 5678999999999988764 356777 664
No 238
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.63 E-value=1.2e-06 Score=59.46 Aligned_cols=107 Identities=11% Similarity=0.122 Sum_probs=70.9
Q ss_pred CeEEEEEC-CCCCEEEEEeC-C----CcEEEEeCCCC-CeE--EeeccccceEEEEEccCCCEEEEeCCC-----CeEEE
Q psy15612 20 QIFSLGYC-PSGEWLAVGME-N----SNVEVLHALKP-DKY--QLHLHESCVLSLRFAACGKWFVSTGKD-----NLLNA 85 (131)
Q Consensus 20 ~v~~~~~~-~~~~~l~~~~~-~----~~v~~~~~~~~-~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~ 85 (131)
.+....|| |||+.|+.... + ..|.++|+.++ +.. .+. .....+.|+|||+.|+....+ ..|+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57789999 99998876533 2 24999999887 521 111 123468899999988766554 25777
Q ss_pred eeCCCCce---E-EecCCCCCeEEEEECCCCCEEEEecC---CCcEEEEEe
Q psy15612 86 WRTPYGAS---I-FQSKESSSVLSCDISADDKYIVTGSG---DKKATVYEV 129 (131)
Q Consensus 86 w~~~~~~~---~-~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~vw~~ 129 (131)
+++.++.. + ...........+.|+|+|++|+..+. ...+.++|+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEES
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 88877642 2 22233455678899999998875542 234555554
No 239
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.57 E-value=2.9e-06 Score=50.57 Aligned_cols=124 Identities=9% Similarity=0.021 Sum_probs=77.8
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCE-EEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEW-LAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
|+.+|+++++.+..+ ...........+++.. ......++.+.++|..+.+. .++.. ...-..+ .+|++.++.+.
T Consensus 77 v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~-~~eGwGL--t~Dg~~L~vSd 152 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRY-SGEGWGL--CYWNGKLVRSD 152 (268)
T ss_dssp EEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEEC-SSCCCCE--EEETTEEEEEC
T ss_pred EEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeC-CCceeEE--ecCCCEEEEEC
Confidence 467888998888776 4444433222334444 44455688999999998886 33432 2322333 46788888777
Q ss_pred CCCeEEEeeCCCCceEEec---CCC---CCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 79 KDNLLNAWRTPYGASIFQS---KES---SSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~~~~---~~~---~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
..+.+.++|..+.+.+... ..+ ..+..+.|. +|+..+....+..|.+.|.
T Consensus 153 Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 153 GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECT
T ss_pred CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeC
Confidence 7899999999998877211 122 234566666 6665555545666766654
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.55 E-value=1.9e-05 Score=46.90 Aligned_cols=128 Identities=8% Similarity=-0.096 Sum_probs=78.5
Q ss_pred EEEeCCCCceeeeec-CCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEeec-cccceEEEEEccCCCEEEEeC
Q psy15612 2 YLQSVSPGRQLQQHD-FSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLHL-HESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~ 78 (131)
..+|...+....... .......++++|++..++.+ ...+.|.++++.......+.. ....+..++++|++..++.+.
T Consensus 61 ~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 61 GRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp EEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEE
T ss_pred EEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEE
Confidence 345555433322222 22567899999876655544 456789999987655433322 224678999999766555443
Q ss_pred C---CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612 79 K---DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV 129 (131)
Q Consensus 79 ~---~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~ 129 (131)
. .+.|..+++...... ...........++++|++..++ +-...+.|.++|+
T Consensus 141 ~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 141 WNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp CCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence 3 367888887543322 2223345688999999876665 4445677888774
No 241
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.54 E-value=3.9e-06 Score=56.53 Aligned_cols=129 Identities=10% Similarity=0.088 Sum_probs=82.4
Q ss_pred CEEEeCCCCceeeeec---CC-------CCeEEEEECCCCC---EEEEEeCCCcEEEEeCCCCCeEE-eeccc-------
Q psy15612 1 MYLQSVSPGRQLQQHD---FS-------SQIFSLGYCPSGE---WLAVGMENSNVEVLHALKPDKYQ-LHLHE------- 59 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~---~~-------~~v~~~~~~~~~~---~l~~~~~~~~v~~~~~~~~~~~~-~~~~~------- 59 (131)
|..+|.++|+.+..+. +. ..+.......+|+ .++.++.++.+.++|..+++... .....
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 356 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM 356 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence 3568999999887662 21 1222222223554 67888899999999999888531 10000
Q ss_pred ---------------------c-----------ceEEEEEccCCCEEEEeCC----------------------------
Q psy15612 60 ---------------------S-----------CVLSLRFAACGKWFVSTGK---------------------------- 79 (131)
Q Consensus 60 ---------------------~-----------~v~~~~~~~~~~~~~~~~~---------------------------- 79 (131)
. .-..++++|+...+++...
T Consensus 357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 436 (689)
T 1yiq_A 357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT 436 (689)
T ss_dssp ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence 0 0012678888777665421
Q ss_pred -----------------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 80 -----------------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 80 -----------------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++.+..||+.+|+.+.............+...+.+++.++.|+.++.||.
T Consensus 437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~ 503 (689)
T 1yiq_A 437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAA 503 (689)
T ss_dssp CCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred cccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEEC
Confidence 36799999999998833333333333355557788888999999999985
No 242
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.54 E-value=1.6e-05 Score=46.92 Aligned_cols=126 Identities=8% Similarity=0.007 Sum_probs=77.2
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
|+.+|+++++.+...............+.+..| .....++.+.++|..+.+..........-..+ .+++..++.+..
T Consensus 45 v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwgl--t~dg~~L~vSdg 122 (243)
T 3mbr_X 45 VRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWAL--TSDDSHLYMSDG 122 (243)
T ss_dssp EEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEE--EECSSCEEEECS
T ss_pred EEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEE--eeCCCEEEEECC
Confidence 467899999998877544444333333344444 44566889999999988863322223333344 457777777777
Q ss_pred CCeEEEeeCCCCceEEec---CCC---CCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 80 DNLLNAWRTPYGASIFQS---KES---SSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~~~~---~~~---~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++.+.++|..+.+.+... .++ ..+..+.+. +|+..+....+..|.+.|.
T Consensus 123 s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 123 TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDP 177 (243)
T ss_dssp SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECT
T ss_pred CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEEC
Confidence 889999999988876211 111 334455554 5555554444556666554
No 243
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.53 E-value=7.5e-06 Score=55.06 Aligned_cols=77 Identities=12% Similarity=0.052 Sum_probs=51.8
Q ss_pred CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEE
Q psy15612 40 SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIV 116 (131)
Q Consensus 40 ~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~ 116 (131)
+.|..||+.+++..-...+...+....+..++..++.++.++.++.||..+|+.+ +..+......-+.+.++|+.++
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 6788999998885332223333444456667788888899999999999999998 3333333333455667777543
No 244
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.51 E-value=3.7e-05 Score=49.12 Aligned_cols=128 Identities=7% Similarity=0.004 Sum_probs=78.7
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCCe-EEeeccccceEEEEEcc-CCCE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS-----NVEVLHALKPDK-YQLHLHESCVLSLRFAA-CGKW 73 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~ 73 (131)
|+.+|..+++.............++++++|+ |+.+...+ .+...+...... ......-.....++++| +|..
T Consensus 164 I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~l 242 (433)
T 4hw6_A 164 FRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKI 242 (433)
T ss_dssp EEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCE
T ss_pred EEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeE
Confidence 4567777676655555556789999999999 44444321 133333332221 11111234566788999 6766
Q ss_pred EEEeCCCCeEEEeeCCCCce-E--EecCCCCCeEEEEECCCCCEEEE-ecCCCcEEEEEe
Q psy15612 74 FVSTGKDNLLNAWRTPYGAS-I--FQSKESSSVLSCDISADDKYIVT-GSGDKKATVYEV 129 (131)
Q Consensus 74 ~~~~~~~~~i~~w~~~~~~~-~--~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~vw~~ 129 (131)
.++-..++.|+.++..++.. . ...........++++|+++.|+. -...+.|..+++
T Consensus 243 yv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 243 YYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp EECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred EEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 66666678899999987766 2 22223334457999999995544 445677877663
No 245
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.44 E-value=4.8e-05 Score=46.18 Aligned_cols=120 Identities=12% Similarity=0.087 Sum_probs=75.4
Q ss_pred CceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC--CeEEEe
Q psy15612 9 GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD--NLLNAW 86 (131)
Q Consensus 9 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~w 86 (131)
.+.+..+........++|+|+++.+++...++.|..+|..+.... .......+..+++.++|+.+++.... ..+..+
T Consensus 22 ~~~~~~~p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~-~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 22 AKIITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQI-HATVEGKVSGLAFTSNGDLVATGWNADSIPVVSL 100 (306)
T ss_dssp EEEEEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEE-EEECSSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred ceEeEeCCCCCCcceEEECCCCCEEEEeCCCCeEEEECCCCceEE-EEeCCCCceeEEEcCCCcEEEEeccCCcceEEEE
Confidence 344444544467889999999987666667888999998764332 22334568899999999965554332 246677
Q ss_pred eCCCCceEEe--cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 87 RTPYGASIFQ--SKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 87 ~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+..+++.... .........++..+++..+++-..++.|..+|.
T Consensus 101 d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~ 145 (306)
T 2p4o_A 101 VKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDV 145 (306)
T ss_dssp ECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEET
T ss_pred cCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeC
Confidence 8777776522 222333455555555555555445666666663
No 246
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.39 E-value=1.3e-05 Score=54.52 Aligned_cols=120 Identities=8% Similarity=0.000 Sum_probs=69.7
Q ss_pred CEEEeCCCC-ceeeeecCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCCe---EEee-ccccceEEEEEccC
Q psy15612 1 MYLQSVSPG-RQLQQHDFSSQIFSLGYCPSGEWLAVGMEN-----SNVEVLHALKPDK---YQLH-LHESCVLSLRFAAC 70 (131)
Q Consensus 1 i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~v~~~~~~~~~~---~~~~-~~~~~v~~~~~~~~ 70 (131)
|+++|+.++ +.+... .......+.|+||++.|+....+ ..|..+++.++.. ..+. ........+.|+||
T Consensus 203 l~v~dl~~g~~~l~~~-~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpD 281 (751)
T 2xe4_A 203 IEFKRISDPSQTIADK-VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAAD 281 (751)
T ss_dssp EEEEETTCTTCCCCCC-EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTT
T ss_pred EEEEECCCCCEeCCcc-ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCC
Confidence 467788777 532110 01113468899999988776654 2577788876642 2222 22334567899999
Q ss_pred CCEEEEeC---CCCeEEEeeCCCC--ce--EEe-cCCCCCeEEEEECCCCCEEEEecCC
Q psy15612 71 GKWFVSTG---KDNLLNAWRTPYG--AS--IFQ-SKESSSVLSCDISADDKYIVTGSGD 121 (131)
Q Consensus 71 ~~~~~~~~---~~~~i~~w~~~~~--~~--~~~-~~~~~~v~~~~~~~~~~~l~~~~~d 121 (131)
|++|+..+ ....+.++|+.++ +. ..+ .........+.|+..+.+++.+..+
T Consensus 282 g~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~ 340 (751)
T 2xe4_A 282 TNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEG 340 (751)
T ss_dssp SSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTT
T ss_pred CCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCC
Confidence 99887654 2345888898765 33 322 2234445556655444444444443
No 247
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.39 E-value=1.1e-05 Score=54.38 Aligned_cols=77 Identities=10% Similarity=0.056 Sum_probs=50.6
Q ss_pred CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEE
Q psy15612 40 SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIV 116 (131)
Q Consensus 40 ~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~ 116 (131)
+.+..||+.+++..-...+......-.+...+..++.++.|+.++.||.++|+.+ ...+......-+.|..+|+.++
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEE
Confidence 6688999998885322222222233345556788888999999999999999998 3333333223466677887543
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.37 E-value=7.7e-05 Score=45.51 Aligned_cols=109 Identities=12% Similarity=0.122 Sum_probs=70.0
Q ss_pred CeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeec-----cccceEEEEEcc-CCCEEEEeCC-------------
Q psy15612 20 QIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHL-----HESCVLSLRFAA-CGKWFVSTGK------------- 79 (131)
Q Consensus 20 ~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~~~~~~~------------- 79 (131)
.+..+++.+ +++ |+.+...+.+..++..++....+.. ....+..+++.+ +|+..++...
T Consensus 81 ~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 81 RTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp CEEEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred CCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 578899987 554 5555444558888877554333221 123467899999 9987665432
Q ss_pred ----CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612 80 ----DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEV 129 (131)
Q Consensus 80 ----~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~ 129 (131)
.+.+..+|..+++.............++++|+++.++.+ ..++.|.++++
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~ 214 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWL 214 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEES
T ss_pred ccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 356888888777654222222345679999999866544 55678888875
No 249
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.35 E-value=8.2e-05 Score=45.40 Aligned_cols=125 Identities=9% Similarity=-0.057 Sum_probs=74.6
Q ss_pred EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCC---eEEeeccccceEEEEEccCCCEEEEeC
Q psy15612 3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPD---KYQLHLHESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (131)
.+|..+++.............++++|+++.|+.+ ...+.|..+++.... ...+....+ +..+++.++|+..++..
T Consensus 169 ~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 169 KYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp EEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred EEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEec
Confidence 3454444433222222345678999999876655 456789999987532 222222233 78899999998766554
Q ss_pred C----------CCeEEEeeCCCCceE-EecCC----CCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 79 K----------DNLLNAWRTPYGASI-FQSKE----SSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 79 ~----------~~~i~~w~~~~~~~~-~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
. .+.+..+|.. ++.+ ..... -..+..+++ .+++++++...++.|..+++.
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred CcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 3 3567888874 6655 22211 234556666 356666665567788888763
No 250
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.24 E-value=1.3e-07 Score=59.01 Aligned_cols=98 Identities=14% Similarity=0.061 Sum_probs=53.7
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeE-EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC-C-CCCe-E
Q psy15612 29 SGEWLAVGMENSNVEVLHALKPDKY-QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK-E-SSSV-L 104 (131)
Q Consensus 29 ~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~-~-~~~v-~ 104 (131)
++..+++++.++.+..||..+++.. +... ..+.+..+..++..++.++.|+.++.||..+|+.+.... + ...+ .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 5778899999999999999988863 2222 344444455677778888899999999998887652211 1 0000 0
Q ss_pred EEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 105 SCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 105 ~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
...+. .+..+++++.++.+..||.
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~ 109 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDL 109 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECC
T ss_pred CceEe-cCCEEEEEeCCCEEEEEEC
Confidence 01111 2344566666777877775
No 251
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.24 E-value=4.3e-05 Score=47.49 Aligned_cols=120 Identities=12% Similarity=0.035 Sum_probs=74.3
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec--cccceEEEEEccCCCEEEEeCC
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL--HESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
..+|.++++.+...... ....+.. ++..++.++.++.+..+|..+++..-... .......... .+..++.++.
T Consensus 252 ~~~d~~tG~~~w~~~~~-~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~ 326 (376)
T 3q7m_A 252 TALDLRSGQIMWKRELG-SVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDS 326 (376)
T ss_dssp EEEETTTCCEEEEECCC-CEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECT
T ss_pred EEEECCCCcEEeeccCC-CCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeC
Confidence 56777788777655332 2333333 46677778888899999999888532221 1111222222 2567788888
Q ss_pred CCeEEEeeCCCCceE-EecCCCCCe-EEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 80 DNLLNAWRTPYGASI-FQSKESSSV-LSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~-~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
++.+..+|..+|+.+ ........+ ..... .+..++.++.+|.+..|+
T Consensus 327 ~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 327 EGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred CCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 999999999999987 222212222 11222 245677788889998886
No 252
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.00031 Score=45.71 Aligned_cols=128 Identities=12% Similarity=0.130 Sum_probs=79.7
Q ss_pred CEEEeCCCCceeeeecC----CCCeEEEEE-------CCCCCEEEEEeCCC-------cEEEEeCCC-CCe------EEe
Q psy15612 1 MYLQSVSPGRQLQQHDF----SSQIFSLGY-------CPSGEWLAVGMENS-------NVEVLHALK-PDK------YQL 55 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~----~~~v~~~~~-------~~~~~~l~~~~~~~-------~v~~~~~~~-~~~------~~~ 55 (131)
|++.|.++++....... ......++| ++++..|+.+...+ .+.+++... +.. ..+
T Consensus 164 i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v 243 (496)
T 3kya_A 164 IQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLI 243 (496)
T ss_dssp EEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEE
T ss_pred EEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceee
Confidence 45677776666544422 235899999 99999776665543 255665333 121 122
Q ss_pred eccccceEEEEEccC-CCEEEEeCCCCeEEEeeCC-------CCce--------------EEecCCCCCeEEEEECCCCC
Q psy15612 56 HLHESCVLSLRFAAC-GKWFVSTGKDNLLNAWRTP-------YGAS--------------IFQSKESSSVLSCDISADDK 113 (131)
Q Consensus 56 ~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~w~~~-------~~~~--------------~~~~~~~~~v~~~~~~~~~~ 113 (131)
.. -.....++.+|+ +.++++-..++.+..+|+. ++.. +...+.......++|+|+|+
T Consensus 244 ~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~ 322 (496)
T 3kya_A 244 AA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGK 322 (496)
T ss_dssp EE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSS
T ss_pred cc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCC
Confidence 22 224567888995 5555566677889999987 5543 12233445678999999999
Q ss_pred EEEEe-cCCCcEEEEEe
Q psy15612 114 YIVTG-SGDKKATVYEV 129 (131)
Q Consensus 114 ~l~~~-~~d~~i~vw~~ 129 (131)
.|+.+ ...+.|+.++.
T Consensus 323 ~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 323 YAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCCEEEEEec
Confidence 65444 45667777654
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.20 E-value=5.7e-05 Score=50.82 Aligned_cols=129 Identities=13% Similarity=0.067 Sum_probs=79.1
Q ss_pred EEEeCCCCceeeeec---CC-------CCeEEEEECCCCC---EEEEEeCCCcEEEEeCCCCCeE-Eeeccc--------
Q psy15612 2 YLQSVSPGRQLQQHD---FS-------SQIFSLGYCPSGE---WLAVGMENSNVEVLHALKPDKY-QLHLHE-------- 59 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~---~~-------~~v~~~~~~~~~~---~l~~~~~~~~v~~~~~~~~~~~-~~~~~~-------- 59 (131)
..+|.++|+.+..+. |. .+.....+..+|+ .++.++.++.+.++|..+++.. ......
T Consensus 273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d 352 (668)
T 1kv9_A 273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVD 352 (668)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccc
Confidence 457888998887662 21 2233333333565 5788889999999999988853 111000
Q ss_pred ---c-ce------------------------EEEEEccCCCEEEEe----------------------------------
Q psy15612 60 ---S-CV------------------------LSLRFAACGKWFVST---------------------------------- 77 (131)
Q Consensus 60 ---~-~v------------------------~~~~~~~~~~~~~~~---------------------------------- 77 (131)
. .+ ..++++|+...++..
T Consensus 353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p 432 (668)
T 1kv9_A 353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP 432 (668)
T ss_dssp TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred cccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence 0 00 125677776655431
Q ss_pred --CCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 78 --GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 78 --~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
..++.+..||..+++.+.............+...+.+++.++.|+.++.||..
T Consensus 433 ~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 433 AAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp GGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred CCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhh
Confidence 12367999999999987322222223333344467788888889999999863
No 254
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.19 E-value=9.9e-05 Score=44.81 Aligned_cols=123 Identities=11% Similarity=0.007 Sum_probs=74.9
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
..+| .+++..... .....+.++...+++.. ..++.++.+..++...............+..+...+++. +..++.+
T Consensus 198 ~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ 274 (330)
T 3hxj_A 198 YAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYD 274 (330)
T ss_dssp EEEC-TTSCEEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEECTT
T ss_pred EEEC-CCCcEEEEEccCCcceeceEECCCCeE-EEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCCe-EEEecCC
Confidence 4567 566665554 33345777777777754 445566778888754444433333333334455555555 5566778
Q ss_pred CeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 81 NLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 81 ~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+.+..+|. +++.. ........+.++...+++++ ..++.+|.+.+...
T Consensus 275 ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l-~~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 275 GHLYAINP-DGTEKWNFETGSWIIATPVIDENGTI-YFGTRNGKFYALFN 322 (330)
T ss_dssp CEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCE-EEECTTSCEEEEEC
T ss_pred CCEEEECC-CCcEEEEEEcCCccccceEEcCCCEE-EEEcCCCeEEEEec
Confidence 88999996 66665 33333455667777777775 45677888877653
No 255
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.19 E-value=7.9e-05 Score=49.26 Aligned_cols=128 Identities=9% Similarity=-0.003 Sum_probs=75.3
Q ss_pred EEEeCCCCceeeeec---CC-------CCeEEEEECCCCC---EEEEEeCCCcEEEEeCCCCCeEE-eeccc--------
Q psy15612 2 YLQSVSPGRQLQQHD---FS-------SQIFSLGYCPSGE---WLAVGMENSNVEVLHALKPDKYQ-LHLHE-------- 59 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~---~~-------~~v~~~~~~~~~~---~l~~~~~~~~v~~~~~~~~~~~~-~~~~~-------- 59 (131)
..+|.++|+.+..+. +. ....-....++|+ .++.++.++.+..+|..+++..- .....
T Consensus 275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~ 354 (571)
T 2ad6_A 275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKV 354 (571)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred EEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccc
Confidence 457888888876652 11 1112222234674 56778889999999998887521 11100
Q ss_pred -----cce--------------------------EEEEEccCCCEEEEeC------------------------------
Q psy15612 60 -----SCV--------------------------LSLRFAACGKWFVSTG------------------------------ 78 (131)
Q Consensus 60 -----~~v--------------------------~~~~~~~~~~~~~~~~------------------------------ 78 (131)
.++ ..++++|+...++...
T Consensus 355 d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 434 (571)
T 2ad6_A 355 DLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPG 434 (571)
T ss_dssp CTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred cccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccC
Confidence 011 2356788766665542
Q ss_pred -------CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 79 -------KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 79 -------~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.++.+..||..+++.+........+....+...+..++.++.|+.+..+|.
T Consensus 435 ~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~ 492 (571)
T 2ad6_A 435 PNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDN 492 (571)
T ss_dssp TTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEET
T ss_pred ccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEEC
Confidence 346789999999988722222222222222224566667888899998885
No 256
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.19 E-value=0.00014 Score=45.16 Aligned_cols=124 Identities=10% Similarity=0.070 Sum_probs=70.4
Q ss_pred CEEEeCCCCceeeeecC----------CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-eeccccceEEEEEcc
Q psy15612 1 MYLQSVSPGRQLQQHDF----------SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-LHLHESCVLSLRFAA 69 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~ 69 (131)
|+.+|.++++.+..... ...+... ...++..++.++.++.+..+|..+++..- ..............
T Consensus 65 v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~- 142 (376)
T 3q7m_A 65 VKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS- 142 (376)
T ss_dssp EEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-
T ss_pred EEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE-
Confidence 45688888888766532 2222221 12245677778888999999999887532 22111111111121
Q ss_pred CCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCe------EEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 70 CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSV------LSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 70 ~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v------~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+..++.++.++.+..+|..+|+.+........+ ...... +..++.+..++.+..+|.
T Consensus 143 -~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 143 -DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp -TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEET
T ss_pred -CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEEC
Confidence 446777888999999999999887222211111 111111 344556666677776664
No 257
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.16 E-value=0.00023 Score=42.21 Aligned_cols=110 Identities=9% Similarity=-0.071 Sum_probs=69.2
Q ss_pred CCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEE-eCCCCeEEEeeCCCCce
Q psy15612 19 SQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVS-TGKDNLLNAWRTPYGAS 93 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~-~~~~~~i~~w~~~~~~~ 93 (131)
.....++++|++..|+.+.. .+.|..+++.......+. .....+..++++|++..++. -...+.|..++......
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 201 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR 201 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE
T ss_pred CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce
Confidence 46789999997666655543 367888888655443332 23346789999998776654 45567899999875444
Q ss_pred EEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 94 IFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 94 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
............++.. .+..+++...++.|..+|.
T Consensus 202 ~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 202 RKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp EEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred EEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeC
Confidence 3222233445667664 3444444445677877764
No 258
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.11 E-value=0.00011 Score=44.63 Aligned_cols=119 Identities=14% Similarity=0.130 Sum_probs=70.9
Q ss_pred EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612 2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK 79 (131)
Q Consensus 2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (131)
..+|.+ ++..... .....+.++...+++. +..++.++.+..+|.. ++. .........+.++...+++...+..
T Consensus 120 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t-- 194 (330)
T 3hxj_A 120 YAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS-- 194 (330)
T ss_dssp EEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--
T ss_pred EEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--
Confidence 455655 5555444 2233345556666666 5556677889999988 553 3333334456667777777755444
Q ss_pred CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+.+..+| .+++.. ........+.++...+++++.+. +.++.+..+|
T Consensus 195 -~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~-t~~~gl~~~~ 241 (330)
T 3hxj_A 195 -DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVT-SLDGHLYAIN 241 (330)
T ss_dssp -SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEE-ETTTEEEEEC
T ss_pred -CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEE-cCCCeEEEEC
Confidence 7788899 667666 33334455777777777765443 3444454443
No 259
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.08 E-value=7.9e-05 Score=47.58 Aligned_cols=109 Identities=9% Similarity=0.019 Sum_probs=69.9
Q ss_pred CeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC-CC----eEEEeeCCCCce
Q psy15612 20 QIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK-DN----LLNAWRTPYGAS 93 (131)
Q Consensus 20 ~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~----~i~~w~~~~~~~ 93 (131)
....++++| ++..|+.+...+.|..+|+.+..+..+......+..++++++|+.++.+.. .+ .+..++.. +..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cce
Confidence 457889998 456666665557889999988776665555567889999999996665543 11 23334432 322
Q ss_pred E--EecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEe
Q psy15612 94 I--FQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 94 ~--~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~ 129 (131)
. ........+..++++| ++.++++-..++.|..++.
T Consensus 217 ~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 217 KVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp CSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred eeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 1 1111234456788999 6776666656677777764
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.06 E-value=7.7e-05 Score=49.33 Aligned_cols=78 Identities=10% Similarity=0.027 Sum_probs=45.3
Q ss_pred CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEE
Q psy15612 39 NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIV 116 (131)
Q Consensus 39 ~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~ 116 (131)
++.+..+|+.+++..-.......+....+...+..++.++.++.++.+|.++|+.+ ...+....-.-+.+..+|+.++
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 46788899988875322112222222222334566777889999999999999998 2222211112233446776544
No 261
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.03 E-value=0.00056 Score=41.81 Aligned_cols=128 Identities=4% Similarity=-0.140 Sum_probs=78.6
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCC----CCeEEe-eccccceEEEEEccCCCEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALK----PDKYQL-HLHESCVLSLRFAACGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~----~~~~~~-~~~~~~v~~~~~~~~~~~~ 74 (131)
|+..|+.+.+....+.....+..++|++.+..|+.+ ..++.|..+++.+ .....+ ...-..+..+++.+.+..+
T Consensus 12 I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~l 91 (316)
T 1ijq_A 12 VRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNI 91 (316)
T ss_dssp EEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEE
T ss_pred EEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeE
Confidence 456677766655555555678899999876665554 4567899999876 222222 2222456789998755544
Q ss_pred -EEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecC-C-CcEEEEE
Q psy15612 75 -VSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSG-D-KKATVYE 128 (131)
Q Consensus 75 -~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~vw~ 128 (131)
.+-...+.|.+.+....... ........+..++++|.+..++.+.. . +.|...+
T Consensus 92 y~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~ 149 (316)
T 1ijq_A 92 YWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 149 (316)
T ss_dssp EEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEc
Confidence 45466788999998754443 33334467789999986665544433 2 4565544
No 262
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.99 E-value=0.00045 Score=46.38 Aligned_cols=107 Identities=14% Similarity=0.115 Sum_probs=69.6
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEeCCCCCeEE---eec-cccceEEEEEccCCCEEEEeCC-CCeEEE
Q psy15612 23 SLGYCP-SGEWLAVGMENS-----------NVEVLHALKPDKYQ---LHL-HESCVLSLRFAACGKWFVSTGK-DNLLNA 85 (131)
Q Consensus 23 ~~~~~~-~~~~l~~~~~~~-----------~v~~~~~~~~~~~~---~~~-~~~~v~~~~~~~~~~~~~~~~~-~~~i~~ 85 (131)
..++.| +++.++.|+.+. .+.+||..+.+... +.. +......+++.++++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556666 788888876532 57889998876432 221 2223345677889999888874 457999
Q ss_pred eeCCCCceEEecC--CCCCeEEEEECCCCCEEEEec-CC-----CcEEEEEe
Q psy15612 86 WRTPYGASIFQSK--ESSSVLSCDISADDKYIVTGS-GD-----KKATVYEV 129 (131)
Q Consensus 86 w~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~vw~~ 129 (131)
||..+.+...... ....-..++..+++++++.|+ .+ ..+.+||.
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCC
Confidence 9998877663222 111223455667899888887 34 45778875
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.92 E-value=0.00027 Score=46.88 Aligned_cols=50 Identities=18% Similarity=0.306 Sum_probs=30.9
Q ss_pred CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
++.+.-||+.+++.+...........-.....+.+++.++.|+.++.+|.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 56788999999998722221111111111124566777888999998885
No 264
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.88 E-value=0.0012 Score=40.72 Aligned_cols=111 Identities=12% Similarity=0.103 Sum_probs=76.3
Q ss_pred CeEEEEE---CCCCCEEEEEeC-------------CCcEEEEeCC---CCCe-EEe--ec-----------cccceEEEE
Q psy15612 20 QIFSLGY---CPSGEWLAVGME-------------NSNVEVLHAL---KPDK-YQL--HL-----------HESCVLSLR 66 (131)
Q Consensus 20 ~v~~~~~---~~~~~~l~~~~~-------------~~~v~~~~~~---~~~~-~~~--~~-----------~~~~v~~~~ 66 (131)
.+..+.+ .|+++++++... +..+..+|+. +++. ... .. ......+++
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva 143 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA 143 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence 3689999 688777775442 5678999998 5553 221 11 113478999
Q ss_pred EccCCCEEEEeCCC-CeEEEeeCCCCceE-Ee-cC----CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 67 FAACGKWFVSTGKD-NLLNAWRTPYGASI-FQ-SK----ESSSVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 67 ~~~~~~~~~~~~~~-~~i~~w~~~~~~~~-~~-~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
..++|+..++.+.. +.|..++....... .. .. .......++++|+|+.|+....++.+..+|+.
T Consensus 144 vD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 144 QDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp ECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred ECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 99999988888877 88888887643232 21 11 12336689999999988777668888888853
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.87 E-value=0.0013 Score=40.82 Aligned_cols=110 Identities=8% Similarity=-0.154 Sum_probs=69.4
Q ss_pred CeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEe-CCC-CeEEEeeCCCCceEE
Q psy15612 20 QIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVST-GKD-NLLNAWRTPYGASIF 95 (131)
Q Consensus 20 ~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~-~~~-~~i~~w~~~~~~~~~ 95 (131)
....+++.+.+..| ++-...+.|.+.++.......+. ..-..+..+++.|.+..++.+ ... +.|...++.......
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 196 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI 196 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE
Confidence 45678887755554 44445678889998766544333 334567899999966655544 334 778888876443332
Q ss_pred e-cCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612 96 Q-SKESSSVLSCDISADDKYIVTG-SGDKKATVYEV 129 (131)
Q Consensus 96 ~-~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~ 129 (131)
. ...-.....++++|++..|+.+ ...+.|..+|+
T Consensus 197 ~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 197 IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp SCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 2 2234567899999876666544 44566776653
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.85 E-value=0.00028 Score=46.81 Aligned_cols=77 Identities=10% Similarity=0.144 Sum_probs=44.8
Q ss_pred CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCe--EEEEECCCCCEE
Q psy15612 39 NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSV--LSCDISADDKYI 115 (131)
Q Consensus 39 ~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l 115 (131)
.+.+..||+.+++..-..........-.....+..++.++.|+.++.+|.++|+.+.....+..+ .-+.+..+|+.+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 46788899988875211111111111111223666777899999999999999998222222222 225555677744
No 267
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.84 E-value=0.0012 Score=39.31 Aligned_cols=113 Identities=12% Similarity=0.098 Sum_probs=76.9
Q ss_pred cCCCCeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCe-EEee-ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612 16 DFSSQIFSLGYCPSGEWLA-VGMENSNVEVLHALKPDK-YQLH-LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA 92 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~-~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 92 (131)
+-...+..++++|++..|+ +...++.|...|.. +++ ..+. .-......+++.+++.++++.-.++.+.++++....
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 4446799999999876554 56778888888988 553 4442 223567889999988877776677888888875433
Q ss_pred e---E--Ee-----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 93 S---I--FQ-----SKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 93 ~---~--~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
. . .. ...+.....++++|.++.|.++.+.....+|.+
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 2 1 11 123445689999999877776665445555554
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.83 E-value=0.0016 Score=40.43 Aligned_cols=125 Identities=4% Similarity=-0.110 Sum_probs=76.5
Q ss_pred EeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEE-EEeCCC
Q psy15612 4 QSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWF-VSTGKD 80 (131)
Q Consensus 4 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~~~~ 80 (131)
.++...+..........+..++|++.+..|+.. ...+.|..+++.+.....+. .....+..+++.+.+..+ .+-...
T Consensus 58 i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~ 137 (349)
T 3v64_C 58 VLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGT 137 (349)
T ss_dssp ECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTT
T ss_pred EeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCC
Confidence 344333333333444557889999766666554 45677888898876654432 223456788998755544 455567
Q ss_pred CeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEec-CC-CcEEEEE
Q psy15612 81 NLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGS-GD-KKATVYE 128 (131)
Q Consensus 81 ~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~vw~ 128 (131)
+.|.+.++...... .....-.....++++|.+..++.+. .+ +.|...+
T Consensus 138 ~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 138 SRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp TEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 78999998754433 3333446678999998666555443 33 5565554
No 269
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.78 E-value=0.002 Score=40.18 Aligned_cols=125 Identities=13% Similarity=0.198 Sum_probs=79.5
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCC----CCE--E-EEEeC---CCcEEEEeC--CCCCeEEeec------cc-cc
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPS----GEW--L-AVGME---NSNVEVLHA--LKPDKYQLHL------HE-SC 61 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l-~~~~~---~~~v~~~~~--~~~~~~~~~~------~~-~~ 61 (131)
|.+||+ +|+.+..+.. +++..+..-|+ |+. + +.... +.+|.+|++ .+..+..+.. .. ..
T Consensus 52 L~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~ 129 (355)
T 3amr_A 52 LVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINE 129 (355)
T ss_dssp EEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSS
T ss_pred EEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCC
Confidence 468998 7888887743 56666666653 332 2 33333 578999966 4555544421 11 45
Q ss_pred eEEEEE--ccC-CC-EEEEeCCCCeEEEeeCC---CC----ceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 62 VLSLRF--AAC-GK-WFVSTGKDNLLNAWRTP---YG----ASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 62 v~~~~~--~~~-~~-~~~~~~~~~~i~~w~~~---~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+..+++ +|. ++ +++....++.+..|++. ++ +.+.....++.+..+...+....|+.+-++.- ||.+
T Consensus 130 pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~G--Iw~~ 206 (355)
T 3amr_A 130 VYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEA--IWKF 206 (355)
T ss_dssp CCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTE--EEEE
T ss_pred eeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccce--EEEE
Confidence 677777 674 44 57777888998888773 33 22233445677888888888888888877744 5543
No 270
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.77 E-value=0.0017 Score=41.58 Aligned_cols=105 Identities=11% Similarity=0.128 Sum_probs=72.6
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-------------eEEeec------cccceEEEEEccC---CCEEEEe
Q psy15612 20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-------------KYQLHL------HESCVLSLRFAAC---GKWFVST 77 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-------------~~~~~~------~~~~v~~~~~~~~---~~~~~~~ 77 (131)
.+..+..+|+|.+|+..+. ..|.+..+..+. +..+.- ....|..+.|+|- +..+++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 5778999999999998755 478888886221 111111 2467999999994 6688888
Q ss_pred CCCCeEEEeeCCCCce--EEec---------CCCCCeEEEEECCCCCEEEEec--CCCcEE
Q psy15612 78 GKDNLLNAWRTPYGAS--IFQS---------KESSSVLSCDISADDKYIVTGS--GDKKAT 125 (131)
Q Consensus 78 ~~~~~i~~w~~~~~~~--~~~~---------~~~~~v~~~~~~~~~~~l~~~~--~d~~i~ 125 (131)
..|+.|++||+..... ..+. .....+.+++|.+++-.|...+ .+|.|.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence 8999999999985321 1111 1226688999999877666644 666653
No 271
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.75 E-value=0.0024 Score=40.25 Aligned_cols=126 Identities=3% Similarity=-0.141 Sum_probs=77.1
Q ss_pred EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEE-EEeCC
Q psy15612 3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWF-VSTGK 79 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~~~ 79 (131)
..++...+..........+..++|++.+..|+.. ...+.|..+++.+.....+. .....+..+++.+.+..+ .+-..
T Consensus 100 ~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~ 179 (386)
T 3v65_B 100 QVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG 179 (386)
T ss_dssp EECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETT
T ss_pred eeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCC
Confidence 3444444333333444568889999766655544 45677888998877654432 223356778888755544 45555
Q ss_pred CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecC-C-CcEEEEE
Q psy15612 80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSG-D-KKATVYE 128 (131)
Q Consensus 80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~vw~ 128 (131)
.+.|.+.++...... .....-..+..++++|.+..|+.+.. + +.|...+
T Consensus 180 ~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~ 231 (386)
T 3v65_B 180 TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 231 (386)
T ss_dssp TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEe
Confidence 678888888754433 33333466789999987666554433 3 4555544
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.75 E-value=0.0021 Score=39.33 Aligned_cols=111 Identities=7% Similarity=-0.160 Sum_probs=70.6
Q ss_pred CCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCC-C-CeEEEeeCCCCceE
Q psy15612 19 SQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGK-D-NLLNAWRTPYGASI 94 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~-~-~~i~~w~~~~~~~~ 94 (131)
..+..+++.+.+..| ++-...+.|.++++.......+. .....+..+++.|.+..++.+.. . +.|...++......
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~ 156 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 156 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE
Confidence 345678887655544 44456778999998766554433 23456789999996665554433 2 67888887643333
Q ss_pred -EecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612 95 -FQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEV 129 (131)
Q Consensus 95 -~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~ 129 (131)
.....-.....++++|++..|+.+ ...+.|..+|+
T Consensus 157 ~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~ 193 (316)
T 1ijq_A 157 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 193 (316)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEec
Confidence 222334668899999877666544 44567777664
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.74 E-value=0.0026 Score=40.30 Aligned_cols=127 Identities=4% Similarity=-0.147 Sum_probs=76.4
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCCCC----CeEEe-eccccceEEEEEccCCC-EE
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHALKP----DKYQL-HLHESCVLSLRFAACGK-WF 74 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~----~~~~~-~~~~~~v~~~~~~~~~~-~~ 74 (131)
+..|+...+..........+..++|++.+..|+... ..+.|..+++.+. ....+ ......+..+++.+.+. ..
T Consensus 95 ~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY 174 (400)
T 3p5b_L 95 RKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIY 174 (400)
T ss_dssp EEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred EEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceE
Confidence 344554444333344556788999998766665554 4677888888652 22232 22445677899987544 44
Q ss_pred EEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecC--CCcEEEEE
Q psy15612 75 VSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSG--DKKATVYE 128 (131)
Q Consensus 75 ~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~vw~ 128 (131)
.+-...+.|.+.++...... ........+..++++|.+..|+.+.. .+.|...+
T Consensus 175 ~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~ 231 (400)
T 3p5b_L 175 WTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 231 (400)
T ss_dssp EEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEE
T ss_pred EEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEe
Confidence 45566778999998755544 33334456889999987665554432 24555544
No 274
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.71 E-value=0.0019 Score=43.16 Aligned_cols=51 Identities=12% Similarity=0.025 Sum_probs=33.1
Q ss_pred EEEeCCCCceeeeec---CCC-------CeEEEEEC-CCC---CEEEEEeCCCcEEEEeCCCCCe
Q psy15612 2 YLQSVSPGRQLQQHD---FSS-------QIFSLGYC-PSG---EWLAVGMENSNVEVLHALKPDK 52 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~---~~~-------~v~~~~~~-~~~---~~l~~~~~~~~v~~~~~~~~~~ 52 (131)
..+|.++|+.+..+. |.. ...-+... .+| ..++.++.++.+.++|..+++.
T Consensus 281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred EEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCE
Confidence 457888888876652 211 11222322 466 4567788999999999988875
No 275
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.67 E-value=0.0023 Score=43.00 Aligned_cols=99 Identities=12% Similarity=0.039 Sum_probs=60.3
Q ss_pred EEEEEC-CCCCEEEEEeCCC-----------cEEEEeCCCCCeEEee---cccc-ceEEEEEccCCCEEEEeCCC-----
Q psy15612 22 FSLGYC-PSGEWLAVGMENS-----------NVEVLHALKPDKYQLH---LHES-CVLSLRFAACGKWFVSTGKD----- 80 (131)
Q Consensus 22 ~~~~~~-~~~~~l~~~~~~~-----------~v~~~~~~~~~~~~~~---~~~~-~v~~~~~~~~~~~~~~~~~~----- 80 (131)
.++.+. .++++++.|+.+. .+.+||..+....... .... .-.++...|+++.++.++.+
T Consensus 402 ~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~ 481 (656)
T 1k3i_A 402 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF 481 (656)
T ss_dssp EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT
T ss_pred ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCc
Confidence 344443 3677777776432 5777887776654332 1222 22345667899999888754
Q ss_pred ------CeEEEeeCCCCceEEecC---CCCCeEEEEECCCCCEEEEecC
Q psy15612 81 ------NLLNAWRTPYGASIFQSK---ESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 81 ------~~i~~w~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
..+.+||..+.+...... ....-....+.|+++.++.|+.
T Consensus 482 ~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 482 EDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 458899998777653221 1222234456789999988875
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.61 E-value=0.0036 Score=38.40 Aligned_cols=110 Identities=9% Similarity=-0.068 Sum_probs=69.2
Q ss_pred CeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeC--CCCeEEEeeCCCCceE-
Q psy15612 20 QIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTG--KDNLLNAWRTPYGASI- 94 (131)
Q Consensus 20 ~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~--~~~~i~~w~~~~~~~~- 94 (131)
....+++.+.+..| ++-...+.|.++++.+.....+. .....+..+++.|.+..++.+. ..+.|...++......
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 34567777655444 44445678899998766544433 3445678999998766555544 3577888887643333
Q ss_pred EecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612 95 FQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEV 129 (131)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~ 129 (131)
.....-.....++++|++..|+.+ +..+.|..+|+
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 222334567899999976666544 44566776664
No 277
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.56 E-value=0.00072 Score=39.45 Aligned_cols=99 Identities=13% Similarity=0.013 Sum_probs=62.9
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-------EEeec-cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612 20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-------YQLHL-HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG 91 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-------~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 91 (131)
.+..++|+|+|.+.+. .++.+.-.+..+... ..+-. --.....+.|.|+|.+.++ .|+.|+-++..+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 5679999999987666 667777666644221 11211 0112468889999987777 5688887876432
Q ss_pred ceE------EecC--CCCCeEEEEECCCCCEEEEecCCCcE
Q psy15612 92 ASI------FQSK--ESSSVLSCDISADDKYIVTGSGDKKA 124 (131)
Q Consensus 92 ~~~------~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i 124 (131)
... ...+ -=..+..+.+.|+|.+.+.. |+.+
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 221 1111 11457899999999988776 5553
No 278
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.52 E-value=0.0057 Score=38.52 Aligned_cols=109 Identities=10% Similarity=-0.007 Sum_probs=70.2
Q ss_pred CCeEEEEECCCCCEEEEEeC-C-CcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEe-CCCCeEEEeeCCCCceE
Q psy15612 19 SQIFSLGYCPSGEWLAVGME-N-SNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVST-GKDNLLNAWRTPYGASI 94 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~-~-~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w~~~~~~~~ 94 (131)
.....++++|.+..|+.+.. . +.|..+++.......+. ..-.....++++|++..|+.+ +..+.|..+++......
T Consensus 202 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~ 281 (386)
T 3v65_B 202 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK 281 (386)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE
T ss_pred CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE
Confidence 56788999987766655543 3 67888888766554432 233457899999876665544 55678999998644333
Q ss_pred -EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 95 -FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 95 -~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
........+..+++ ..+.++.+-...+.|..+|
T Consensus 282 ~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 282 AVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence 33333456777888 3445555555566676665
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.50 E-value=0.0064 Score=38.53 Aligned_cols=111 Identities=6% Similarity=-0.156 Sum_probs=71.9
Q ss_pred CCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeC--CCCeEEEeeCCCCceE
Q psy15612 19 SQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTG--KDNLLNAWRTPYGASI 94 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~--~~~~i~~w~~~~~~~~ 94 (131)
.....+++.+.+..| ++-...+.|.+.++.+.....+. ..-..+..+++.|.+..++.+. ..+.|...++......
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 456788888754444 44455678888998877654443 2344578999999766655443 2467888888644433
Q ss_pred -EecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEe
Q psy15612 95 -FQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEV 129 (131)
Q Consensus 95 -~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~ 129 (131)
.....-.....+++++++..|+.+. ..+.|...|+
T Consensus 239 ~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~ 275 (400)
T 3p5b_L 239 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 275 (400)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeC
Confidence 3233346788999998777666553 3556666653
No 280
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.50 E-value=0.0026 Score=42.53 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=43.5
Q ss_pred CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEE
Q psy15612 39 NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYI 115 (131)
Q Consensus 39 ~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l 115 (131)
.+.+.-||+.+++..-..........-.+...+..++.++.|+.++.+|.++|+.+ ...+......-+.+..+|+.+
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qy 530 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQY 530 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEE
Confidence 35678888888775221111111111112224666777889999999999999998 333222222224455677643
No 281
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.49 E-value=0.007 Score=38.84 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=65.5
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCCe-EEeecc----ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--------
Q psy15612 28 PSGEWLAVGMENSNVEVLHALKPDK-YQLHLH----ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-------- 94 (131)
Q Consensus 28 ~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-------- 94 (131)
.+|..++.+- ++.++.-++..... +.+... -..+..+..+|+|++++..+ +..+.+..+..+...
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccccc
Confidence 3455555543 35677767663332 222222 22578899999999999886 446777766532211
Q ss_pred ------EecC-----CCCCeEEEEECCC---CCEEEEecCCCcEEEEEee
Q psy15612 95 ------FQSK-----ESSSVLSCDISAD---DKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 95 ------~~~~-----~~~~v~~~~~~~~---~~~l~~~~~d~~i~vw~~~ 130 (131)
+..+ ....|..+.|+|- +..|++...|+.|++||+.
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~ 157 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDIL 157 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETT
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcc
Confidence 1111 3577999999995 4578888889999999974
No 282
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.49 E-value=0.0071 Score=38.78 Aligned_cols=128 Identities=8% Similarity=0.040 Sum_probs=77.1
Q ss_pred EEEeCCCCceeee-e--cCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCC--CCCe---EEeecc--------------
Q psy15612 2 YLQSVSPGRQLQQ-H--DFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHAL--KPDK---YQLHLH-------------- 58 (131)
Q Consensus 2 ~iwd~~~~~~~~~-~--~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~--~~~~---~~~~~~-------------- 58 (131)
+.+|..+++.... . ........++++|+++.|+.+ ...+.|..++.. ++.. ..+.+.
T Consensus 253 ~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a 332 (433)
T 4hw6_A 253 SSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGA 332 (433)
T ss_dssp EEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGS
T ss_pred EEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccce
Confidence 4455555554222 2 222234569999999965554 456778887764 2221 111111
Q ss_pred -ccceEEEEE---------ccCCCEEEEeCCCCeEEEeeCCCCceEEecCC------------------CCCeEEEEEC-
Q psy15612 59 -ESCVLSLRF---------AACGKWFVSTGKDNLLNAWRTPYGASIFQSKE------------------SSSVLSCDIS- 109 (131)
Q Consensus 59 -~~~v~~~~~---------~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~------------------~~~v~~~~~~- 109 (131)
-..+..+++ .++|...++-...+.|+.++. +|......+. -..+..++++
T Consensus 333 ~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~ 411 (433)
T 4hw6_A 333 RLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDM 411 (433)
T ss_dssp BCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEET
T ss_pred EEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEEC
Confidence 123667888 667777666677788999985 5654422211 1347889999
Q ss_pred CCCCEEEEecCCCcEEEEEee
Q psy15612 110 ADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 110 ~~~~~l~~~~~d~~i~vw~~~ 130 (131)
++++++++-..++.|+..++.
T Consensus 412 ~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 412 KRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEecC
Confidence 677766666667788888763
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.49 E-value=0.001 Score=45.17 Aligned_cols=109 Identities=7% Similarity=-0.142 Sum_probs=65.6
Q ss_pred eEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEeec-cccceEEEEEccCCCEEEEeCC--CCeEEEeeCCCCceE-E
Q psy15612 21 IFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLHL-HESCVLSLRFAACGKWFVSTGK--DNLLNAWRTPYGASI-F 95 (131)
Q Consensus 21 v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~-~ 95 (131)
...+++.+.+..| ++-...+.|.++++.+.....+.. ....+..+++.|.+..|+.+.. .+.|..+++...... .
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l 534 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE
Confidence 4567777544444 444456789999988766544432 2345678899987665555443 267877777533322 2
Q ss_pred ecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612 96 QSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV 129 (131)
Q Consensus 96 ~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~ 129 (131)
....-.....++++|++..|+ +-...+.|.++++
T Consensus 535 ~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~ 569 (699)
T 1n7d_A 535 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 569 (699)
T ss_dssp SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECS
T ss_pred EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEcc
Confidence 222334567899998765554 4444566776654
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.49 E-value=0.0054 Score=40.08 Aligned_cols=110 Identities=7% Similarity=-0.017 Sum_probs=67.6
Q ss_pred CeEEEEECCC-CCEE-EEEeCCCcEEEEeCCCCCeEEeecc----ccceEEEEE-------ccCCCEEEEeCCCC-----
Q psy15612 20 QIFSLGYCPS-GEWL-AVGMENSNVEVLHALKPDKYQLHLH----ESCVLSLRF-------AACGKWFVSTGKDN----- 81 (131)
Q Consensus 20 ~v~~~~~~~~-~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~----~~~v~~~~~-------~~~~~~~~~~~~~~----- 81 (131)
....|+++|. +..| ++....+.+++.|+..+.+..+... ...+..++| +++|..++.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 4444 4444446788899988887654322 235889999 99999766665443
Q ss_pred --eEEEeeCCC-CceE-----EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612 82 --LLNAWRTPY-GASI-----FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 82 --~i~~w~~~~-~~~~-----~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~ 129 (131)
.+.+++... +... ...........++++|+ +.++++-..++.|..+|+
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~ 276 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDL 276 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECH
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEec
Confidence 255665332 2221 01111234457788995 555556666777888775
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.45 E-value=0.012 Score=40.66 Aligned_cols=114 Identities=4% Similarity=-0.140 Sum_probs=69.0
Q ss_pred ecCCCCeEEEEECCCCCEEEE-EeCCCcEEEEeCCCC----CeEE-eeccccceEEEEEccCCCEEE-EeCCCCeEEEee
Q psy15612 15 HDFSSQIFSLGYCPSGEWLAV-GMENSNVEVLHALKP----DKYQ-LHLHESCVLSLRFAACGKWFV-STGKDNLLNAWR 87 (131)
Q Consensus 15 ~~~~~~v~~~~~~~~~~~l~~-~~~~~~v~~~~~~~~----~~~~-~~~~~~~v~~~~~~~~~~~~~-~~~~~~~i~~w~ 87 (131)
......+..+++++.+..|+. -...+.|..+++... .... +......+..+++.+.+..|+ +-...+.|.+.+
T Consensus 420 ~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ 499 (791)
T 3m0c_C 420 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 499 (791)
T ss_dssp ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEe
Confidence 344456788999886555544 444567888888653 2222 222345567899988776555 445677899999
Q ss_pred CCCCceE-EecCCCCCeEEEEECCCCCEEEEecC-C-CcEEEEE
Q psy15612 88 TPYGASI-FQSKESSSVLSCDISADDKYIVTGSG-D-KKATVYE 128 (131)
Q Consensus 88 ~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~vw~ 128 (131)
+...... ........+..++++|.+..|+.+.. + +.|.+.+
T Consensus 500 ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~ 543 (791)
T 3m0c_C 500 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 543 (791)
T ss_dssp TTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEe
Confidence 8755544 33334456889999997665554432 2 4455444
No 286
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.45 E-value=0.012 Score=40.46 Aligned_cols=107 Identities=10% Similarity=0.100 Sum_probs=74.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-----cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-----HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS 93 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~ 93 (131)
..|.++...+++..|..|..++-+..++..+++...+.. ....|.++...++|+..+... +.+..|+..+++.
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSF 483 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEE
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeE
Confidence 468888888888856667776679999998877654432 235688898888888666554 4588899887766
Q ss_pred EEec-------CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 94 IFQS-------KESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 94 ~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.... .....|.++...++|++.+.+. + -+..||.
T Consensus 484 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~ 524 (795)
T 4a2l_A 484 TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQ 524 (795)
T ss_dssp EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEE
T ss_pred EEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeC
Confidence 5221 1236788999999888665554 3 4666664
No 287
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.38 E-value=0.0088 Score=37.22 Aligned_cols=99 Identities=14% Similarity=0.109 Sum_probs=61.1
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee------ccccceEEEEEccC---CCEEEEeCC-C-----Ce
Q psy15612 18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH------LHESCVLSLRFAAC---GKWFVSTGK-D-----NL 82 (131)
Q Consensus 18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~------~~~~~v~~~~~~~~---~~~~~~~~~-~-----~~ 82 (131)
-.....++|.|+|+++++ ...+.|.+++ .+....+. ........++++|+ +..++.+.. . +.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 456789999999985554 5668899988 33322111 12356889999998 555554432 2 56
Q ss_pred EEEeeCCCCc-----eEEe-cC----CCCCeEEEEECCCCCEEEEec
Q psy15612 83 LNAWRTPYGA-----SIFQ-SK----ESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 83 i~~w~~~~~~-----~~~~-~~----~~~~v~~~~~~~~~~~l~~~~ 119 (131)
|..++...+. .+.. .. .......++|.|+|.+.++.+
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 7778776432 1111 11 123446899999998666643
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.33 E-value=0.0007 Score=45.93 Aligned_cols=125 Identities=4% Similarity=-0.163 Sum_probs=69.0
Q ss_pred EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCCC----CCeEE-eeccccceEEEEEccCCCEEE-
Q psy15612 3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHALK----PDKYQ-LHLHESCVLSLRFAACGKWFV- 75 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~~----~~~~~-~~~~~~~v~~~~~~~~~~~~~- 75 (131)
..++.+.+....+.....+..++|++.+..|+.+. ..+.|..+++.+ ..... +......+..+++.+.+..|+
T Consensus 390 ~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~ 469 (699)
T 1n7d_A 390 KMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYW 469 (699)
T ss_dssp EECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEE
T ss_pred EEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEE
Confidence 34444444443333344567788988776666553 456788888875 22212 111223455778875444444
Q ss_pred EeCCCCeEEEeeCCCCceEEec-CCCCCeEEEEECCCCCEEEEecC-C-CcEEEE
Q psy15612 76 STGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISADDKYIVTGSG-D-KKATVY 127 (131)
Q Consensus 76 ~~~~~~~i~~w~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~vw 127 (131)
+-...+.|.++++.......+. ........++++|.+.+|+.+.. . +.|.+.
T Consensus 470 tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~ 524 (699)
T 1n7d_A 470 TDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 524 (699)
T ss_dssp CCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBC
T ss_pred EeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEE
Confidence 4455678999998755444322 22345677888886555544332 2 445443
No 289
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.30 E-value=0.011 Score=36.91 Aligned_cols=110 Identities=14% Similarity=0.212 Sum_probs=72.0
Q ss_pred CCeEEEEE--CCC-CC-EEEEEeCCCcEEEEeCC---CCCe-----EEeeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612 19 SQIFSLGY--CPS-GE-WLAVGMENSNVEVLHAL---KPDK-----YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAW 86 (131)
Q Consensus 19 ~~v~~~~~--~~~-~~-~l~~~~~~~~v~~~~~~---~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w 86 (131)
..++.+++ +|. ++ +++....++.+..|++. .+.. +++. -.+.+..+...+....++.+-++..|..+
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~ 206 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYIAEEDEAIWKF 206 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEEecccceEEEE
Confidence 45666777 774 44 56777888999998883 2221 3332 34578888898888888889888777777
Q ss_pred eCC-----CCceEEecCC---CCCeEEEEE--CCCCC-EEEEec-CCCcEEEEEe
Q psy15612 87 RTP-----YGASIFQSKE---SSSVLSCDI--SADDK-YIVTGS-GDKKATVYEV 129 (131)
Q Consensus 87 ~~~-----~~~~~~~~~~---~~~v~~~~~--~~~~~-~l~~~~-~d~~i~vw~~ 129 (131)
+.+ +++.+...+. ...+..+++ .++++ ++++++ .+.++.+||.
T Consensus 207 da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 207 SAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp ECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred eCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 754 2333322222 246788887 45555 565555 5678999986
No 290
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.27 E-value=0.012 Score=36.68 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=64.3
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee-------ccccceEEEEEccC---CCEEEEe---CCCCe
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH-------LHESCVLSLRFAAC---GKWFVST---GKDNL 82 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~---~~~~~~~---~~~~~ 82 (131)
..-.....++|.|+|.++++.-..+.|.+++...+....+. ........++++|+ ...++.. ..++.
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 44466889999999987766654889999987655543221 23456789999995 3444332 23455
Q ss_pred EEEeeCCCC----------ceEEe-c--CCCCCeEEEEECCCCCEEEEec
Q psy15612 83 LNAWRTPYG----------ASIFQ-S--KESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 83 i~~w~~~~~----------~~~~~-~--~~~~~v~~~~~~~~~~~l~~~~ 119 (131)
|.-|....+ +.+.. . ........+.|.|+|.+.++.+
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 665655431 11111 1 1223456799999998777654
No 291
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.22 E-value=0.014 Score=36.38 Aligned_cols=100 Identities=11% Similarity=0.060 Sum_probs=60.7
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee------ccccceEEEEEccC---CCEEEEeCC----C---
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH------LHESCVLSLRFAAC---GKWFVSTGK----D--- 80 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~------~~~~~v~~~~~~~~---~~~~~~~~~----~--- 80 (131)
.-.....++|.|+|++++ +...+.|.+++.. +. ..+. ........++++|+ +..++.+.. +
T Consensus 27 ~l~~P~~ia~~pdG~l~V-~e~~g~I~~~d~~-G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 27 DLEVPWSIAPLGGGRYLV-TERPGRLVLISPS-GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCSCEEEEEEEETTEEEE-EETTTEEEEECSS-CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCCCeEEEEcCCCeEEE-EeCCCEEEEEeCC-Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 345678999999998554 4566889988743 33 2221 12346789999997 444444322 2
Q ss_pred -CeEEEeeCCCC------ce-EE--ec-CCCCCeEEEEECCCCCEEEEec
Q psy15612 81 -NLLNAWRTPYG------AS-IF--QS-KESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 81 -~~i~~w~~~~~------~~-~~--~~-~~~~~v~~~~~~~~~~~l~~~~ 119 (131)
+.|..++.... .. +. .. ........++|.|+|.++++.+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 56777776543 11 11 11 1123356799999998776643
No 292
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.20 E-value=0.015 Score=36.10 Aligned_cols=74 Identities=8% Similarity=0.025 Sum_probs=55.2
Q ss_pred CeEEEEECCCCCEEEEEeCC-CcEEEEeCCCCCeEEeec------cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612 20 QIFSLGYCPSGEWLAVGMEN-SNVEVLHALKPDKYQLHL------HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA 92 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~-~~v~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 92 (131)
....++..++|+..++++.. +.|...+........+.. .......++++|+|+.++.....+.+..+|+.+..
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv 217 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPY 217 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSS
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCc
Confidence 48899999999999988887 888877877654332211 11235689999999988887669999999988544
Q ss_pred e
Q psy15612 93 S 93 (131)
Q Consensus 93 ~ 93 (131)
.
T Consensus 218 ~ 218 (334)
T 2p9w_A 218 A 218 (334)
T ss_dssp C
T ss_pred c
Confidence 3
No 293
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.19 E-value=0.013 Score=39.72 Aligned_cols=55 Identities=7% Similarity=0.041 Sum_probs=38.5
Q ss_pred CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 40 SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 40 ~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
+.|..||+.+++..-............+...+..++.++.++.++.||..+|+.+
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 6788899988875321112222223334446778888899999999999999998
No 294
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.14 E-value=0.018 Score=36.05 Aligned_cols=99 Identities=8% Similarity=-0.049 Sum_probs=64.7
Q ss_pred CCeEEEEECCCCCEEEEEeC-----------------CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe-CCC
Q psy15612 19 SQIFSLGYCPSGEWLAVGME-----------------NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST-GKD 80 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~-----------------~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~ 80 (131)
...+.+.+.++|.+.++... .+.+..++. ++...+...-.....++|+||++.++.+ +..
T Consensus 165 ~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~ 242 (355)
T 3sre_A 165 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLA 242 (355)
T ss_dssp SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGG
T ss_pred CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCC
Confidence 45789999999987776531 234555554 3443333334567899999999887765 557
Q ss_pred CeEEEeeCCC-CceE--EecCCCCCeEEEEECC-CCCEEEEec
Q psy15612 81 NLLNAWRTPY-GASI--FQSKESSSVLSCDISA-DDKYIVTGS 119 (131)
Q Consensus 81 ~~i~~w~~~~-~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~ 119 (131)
+.|..|++.. ++.. ......+.+-.+++.+ +|++.+++.
T Consensus 243 ~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 243 HKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEE
T ss_pred CeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEec
Confidence 8899998863 4332 1123356778889998 588766543
No 295
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.09 E-value=0.017 Score=35.00 Aligned_cols=124 Identities=7% Similarity=0.022 Sum_probs=69.5
Q ss_pred EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC--cEEEEeCCCCCeEEeec--cccceEEEEEccCCCEEEEeC
Q psy15612 3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS--NVEVLHALKPDKYQLHL--HESCVLSLRFAACGKWFVSTG 78 (131)
Q Consensus 3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~v~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~ 78 (131)
.+|... +..........+..+++.++++++++..... .+..++..+++...+.. .......++..+++..+++-.
T Consensus 57 ~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~ 135 (306)
T 2p4o_A 57 SITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADS 135 (306)
T ss_dssp EECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEET
T ss_pred EECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEEC
Confidence 344432 3333334445688899999999665543322 46667777776543322 122334455555554455555
Q ss_pred CCCeEEEeeCCCCceE-E-e-------c--CCCCCeEEEEECCCCCEEEE-ecCCCcEEEEEe
Q psy15612 79 KDNLLNAWRTPYGASI-F-Q-------S--KESSSVLSCDISADDKYIVT-GSGDKKATVYEV 129 (131)
Q Consensus 79 ~~~~i~~w~~~~~~~~-~-~-------~--~~~~~v~~~~~~~~~~~l~~-~~~d~~i~vw~~ 129 (131)
..+.++.+|..+++.. . . . ..-.....+ +|+++.++. -...+.|..+++
T Consensus 136 ~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~ 196 (306)
T 2p4o_A 136 YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPV 196 (306)
T ss_dssp TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEB
T ss_pred CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEe
Confidence 6788999998765321 1 1 0 111234445 778776644 445678888875
No 296
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.09 E-value=0.029 Score=37.48 Aligned_cols=71 Identities=13% Similarity=0.102 Sum_probs=52.8
Q ss_pred ccceEEEEEccCCCEEEEeCC-CCeEEEeeCCC------Cce-------EEecCCCCCeEEEEECCCCCEEEEecCCCcE
Q psy15612 59 ESCVLSLRFAACGKWFVSTGK-DNLLNAWRTPY------GAS-------IFQSKESSSVLSCDISADDKYIVTGSGDKKA 124 (131)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~-~~~i~~w~~~~------~~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 124 (131)
...+..+..+|||++++.++. +.++.++|... .+. ......+-...+.+|.++|+-..+...|.+|
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceE
Confidence 345678999999999876654 67899998763 111 1233356778899999999766777789999
Q ss_pred EEEEe
Q psy15612 125 TVYEV 129 (131)
Q Consensus 125 ~vw~~ 129 (131)
.-|++
T Consensus 402 vkWni 406 (638)
T 3sbq_A 402 VKWNM 406 (638)
T ss_dssp EEEEH
T ss_pred EEEec
Confidence 99986
No 297
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.03 E-value=0.028 Score=36.38 Aligned_cols=103 Identities=9% Similarity=0.090 Sum_probs=61.8
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee---c------cccceEEEEEccC---CCEEEEeCC-----
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH---L------HESCVLSLRFAAC---GKWFVSTGK----- 79 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~---~------~~~~v~~~~~~~~---~~~~~~~~~----- 79 (131)
.-.....|+|.|+|+++++....+.|.+++...+....+. . .......++|+|+ +..|+.+..
T Consensus 25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 3456789999999997776544446888876555432221 1 2345679999995 555544321
Q ss_pred --------CCeEEEeeCCCC--c-----eEEe-c--CCCCCeEEEEECCCCCEEEEec
Q psy15612 80 --------DNLLNAWRTPYG--A-----SIFQ-S--KESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 80 --------~~~i~~w~~~~~--~-----~~~~-~--~~~~~v~~~~~~~~~~~l~~~~ 119 (131)
...|.-++...+ + .+.. . ........++|.|+|.+.++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555554321 1 1111 1 1235578999999999777654
No 298
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.02 E-value=0.022 Score=38.01 Aligned_cols=104 Identities=12% Similarity=0.049 Sum_probs=65.4
Q ss_pred cCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCC------Ce-------EEeeccccceEEEEEccCCCEEEEeCCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKP------DK-------YQLHLHESCVLSLRFAACGKWFVSTGKDN 81 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~------~~-------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 81 (131)
......-.+..+|||++++.++. +.++.++|.+.- ++ .....-...+...+|.++|....+.--|.
T Consensus 320 P~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 320 PVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp EESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTT
T ss_pred eCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecc
Confidence 44445566888999999877654 678999998731 11 11112344678899999996555666789
Q ss_pred eEEEeeCCCC------c----eEEecCCCCCeEEEEE------CCCCCEEEEec
Q psy15612 82 LLNAWRTPYG------A----SIFQSKESSSVLSCDI------SADDKYIVTGS 119 (131)
Q Consensus 82 ~i~~w~~~~~------~----~~~~~~~~~~v~~~~~------~~~~~~l~~~~ 119 (131)
.+..|++... + .+........+-.+.- .|+|++|++..
T Consensus 400 qvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 400 QVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred eEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 9999998643 1 1222222233333333 56888888764
No 299
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.00 E-value=0.044 Score=38.06 Aligned_cols=111 Identities=6% Similarity=-0.171 Sum_probs=71.9
Q ss_pred CCeEEEEECCCCCEEEE-EeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCC--CCeEEEeeCCCCceE
Q psy15612 19 SQIFSLGYCPSGEWLAV-GMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGK--DNLLNAWRTPYGASI 94 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~-~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~ 94 (131)
..+..+++.+.+..|+. -...+.|.+.++.+.....+. ..-..+..+++.|.+..|+.+.. .+.|...++......
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 550 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence 44567888877755554 445678999999876654443 33456889999997666655432 367888888754444
Q ss_pred -EecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEe
Q psy15612 95 -FQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEV 129 (131)
Q Consensus 95 -~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~ 129 (131)
.....-..+..+++++.+..|+.+. ..+.|...++
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 587 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEec
Confidence 3333346788999997766665543 3455665553
No 300
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.98 E-value=0.024 Score=34.80 Aligned_cols=112 Identities=9% Similarity=-0.061 Sum_probs=70.5
Q ss_pred CCCCeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEe-CCCCeEEEeeCCCCc
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGM--ENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVST-GKDNLLNAWRTPYGA 92 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w~~~~~~ 92 (131)
.......+++.|.+..|+.+. ..+.|...++.......+. ..-.....++++|++..++.+ +..+.|..+++....
T Consensus 120 ~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~ 199 (318)
T 3sov_A 120 ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 199 (318)
T ss_dssp SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc
Confidence 335678899998766666555 2577888888765544332 233457899999976666554 556789999987443
Q ss_pred eE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 93 SI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 93 ~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.. ........+..+++.. +..+.+-...+.|..++.
T Consensus 200 ~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 200 RQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNK 236 (318)
T ss_dssp CEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred eEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEEC
Confidence 33 3333445667777753 344445445566666653
No 301
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.90 E-value=0.027 Score=34.40 Aligned_cols=89 Identities=9% Similarity=0.086 Sum_probs=54.1
Q ss_pred EEECCCCCEEEEEe----CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC-CCeEEEeeCCCCceEEecC
Q psy15612 24 LGYCPSGEWLAVGM----ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK-DNLLNAWRTPYGASIFQSK 98 (131)
Q Consensus 24 ~~~~~~~~~l~~~~----~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~w~~~~~~~~~~~~ 98 (131)
..++++++.|+... ....|...++.+.....+..+.. ..++++++.|+-.+. ...|..-++..+....+..
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~ 184 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD 184 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC
Confidence 36777888888765 34456666777666655655433 346778888876654 5678877877655443322
Q ss_pred CCCCeEEEEECCCCCEEEEec
Q psy15612 99 ESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 99 ~~~~v~~~~~~~~~~~l~~~~ 119 (131)
+... ..+.|++.+|+-..
T Consensus 185 --~~~~-~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 185 --CNCY-KPVVLDDTNVYYMD 202 (302)
T ss_dssp --SCEE-EEEEEETTEEEEEE
T ss_pred --CCcc-ceeeecCCEEEEEE
Confidence 1222 23557777766443
No 302
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.73 E-value=0.043 Score=34.17 Aligned_cols=102 Identities=7% Similarity=-0.007 Sum_probs=58.3
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE---e----eccccceEEEEEccC---CCEEEEe-CC-------
Q psy15612 18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ---L----HLHESCVLSLRFAAC---GKWFVST-GK------- 79 (131)
Q Consensus 18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~---~----~~~~~~v~~~~~~~~---~~~~~~~-~~------- 79 (131)
-.....++|.|+|+.++.+...+.|.+++........ + .........++++|+ +..++.+ +.
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 3567899999999834455567899998854321111 1 112345689999996 4444433 22
Q ss_pred CCeEEEeeCCCC--c---eE-Eec--C----CCCCeEEEEECCCCCEEEEec
Q psy15612 80 DNLLNAWRTPYG--A---SI-FQS--K----ESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 80 ~~~i~~w~~~~~--~---~~-~~~--~----~~~~v~~~~~~~~~~~l~~~~ 119 (131)
...|..++.... . .. ... . .......++|.|+|.++++.+
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 234666665432 1 11 111 1 122346799999997666543
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.72 E-value=0.066 Score=36.08 Aligned_cols=104 Identities=6% Similarity=-0.067 Sum_probs=64.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCe-EE-eeccccceEEEEEccCCCEEE-EeCCCCeEEEeeCCCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHALKPDK-YQ-LHLHESCVLSLRFAACGKWFV-STGKDNLLNAWRTPYG 91 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~~~-~~-~~~~~~~v~~~~~~~~~~~~~-~~~~~~~i~~w~~~~~ 91 (131)
.....+..+++++.+..|+.+. ..+.|..+++.+... .. +...-..+..+++.+.+..++ +-...+.|.+.++...
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 3445678999998777666554 456788888876532 22 222335688999998655554 4566788999998755
Q ss_pred ceE-EecCCCCCeEEEEECCCCCEEEEec
Q psy15612 92 ASI-FQSKESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 92 ~~~-~~~~~~~~v~~~~~~~~~~~l~~~~ 119 (131)
... .....-..+..+++.|.+..|+.+.
T Consensus 117 ~~~~l~~~~l~~P~~Iavdp~~g~ly~tD 145 (619)
T 3s94_A 117 LRKVLFWQELDQPRAIALDPSSGFMYWTD 145 (619)
T ss_dssp SCEEEECSSCSCCCCEEEETTTTEEEEEE
T ss_pred CEEEEEeCCCCCCceEEEecCCCeEEEec
Confidence 443 3223445677899988755554443
No 304
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.72 E-value=0.067 Score=36.06 Aligned_cols=110 Identities=9% Similarity=-0.102 Sum_probs=70.5
Q ss_pred CCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCC--CCeEEEeeCCCCceE
Q psy15612 19 SQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGK--DNLLNAWRTPYGASI 94 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~ 94 (131)
..+..+++.+.+..|+.+ ...+.|.+.++.+.....+. ..-..+..+++.|.+..++.+.. ...|...++......
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 467889998866655544 55678999999876654443 34456789999997555554432 456776776643333
Q ss_pred -EecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEE
Q psy15612 95 -FQSKESSSVLSCDISADDKYIVTG-SGDKKATVYE 128 (131)
Q Consensus 95 -~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~ 128 (131)
.....-..+..+++++++..|+.+ ...+.|...|
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~ 199 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 199 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEES
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEec
Confidence 332345668899999876655544 3445565554
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.62 E-value=0.045 Score=32.90 Aligned_cols=97 Identities=13% Similarity=0.067 Sum_probs=52.9
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCCeEEeecc---ccceEEEEEccCCCEEEEeCCC-----CeEEEeeCCCCceEE
Q psy15612 29 SGEWLAVGMEN-----SNVEVLHALKPDKYQLHLH---ESCVLSLRFAACGKWFVSTGKD-----NLLNAWRTPYGASIF 95 (131)
Q Consensus 29 ~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~~~ 95 (131)
+++.++.|+.+ ..+..||+.+..-..+... ......+.+ +++.++.++.+ +.+.+||+.+.+...
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 56666666543 4588899887765443221 111122222 56667777654 468899998887763
Q ss_pred ecCC---CCCeEEEEECCCCCEEEEecCCC-----cEEEEEe
Q psy15612 96 QSKE---SSSVLSCDISADDKYIVTGSGDK-----KATVYEV 129 (131)
Q Consensus 96 ~~~~---~~~v~~~~~~~~~~~l~~~~~d~-----~i~vw~~ 129 (131)
.... ......+.+ ++++++.|+.++ .+.+||+
T Consensus 237 ~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 237 VTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEET
T ss_pred CCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcC
Confidence 3221 111122222 566667766542 3555554
No 306
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.58 E-value=0.087 Score=35.60 Aligned_cols=110 Identities=8% Similarity=-0.049 Sum_probs=71.1
Q ss_pred CCCeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe-CCCCeEEEeeCCCCceE
Q psy15612 18 SSQIFSLGYCPSGEWLAVGM--ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST-GKDNLLNAWRTPYGASI 94 (131)
Q Consensus 18 ~~~v~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w~~~~~~~~ 94 (131)
-.....+++.|....|+.+. ..+.|...++.......+...-..+..+++++++..++.+ ...+.|..+++......
T Consensus 122 l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~ 201 (628)
T 4a0p_A 122 LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE 201 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE
Confidence 34578999998665665554 2567888888776655544445678899999987766655 55678999998754444
Q ss_pred EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 95 FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
...........+++.. ++.+.+-...+.|...|
T Consensus 202 v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 202 VIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp EEEECCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred EeeccCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 3333344566777764 34444444456666554
No 307
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.56 E-value=0.099 Score=36.05 Aligned_cols=107 Identities=5% Similarity=-0.021 Sum_probs=72.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec---------cccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL---------HESCVLSLRFAACGKWFVSTGKDNLLNAWRTP 89 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~ 89 (131)
..|.++...++|.+ ..|..++-+..++..++....+.. ....|.++...++|+.+..++.++.+..+|..
T Consensus 357 ~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~ 435 (795)
T 4a2l_A 357 NVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN 435 (795)
T ss_dssp SSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred CeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence 45888888887764 456666568899988776544321 13568888888888844456666779999998
Q ss_pred CCceEEec-----CCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 90 YGASIFQS-----KESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 90 ~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+++..... .....|.++...++|++.+.+. +| +..||
T Consensus 436 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~G-l~~~~ 477 (795)
T 4a2l_A 436 SGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SA-LVRFN 477 (795)
T ss_dssp TCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SC-EEEEE
T ss_pred CCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-Cc-eeEEe
Confidence 87765322 1346788999888888665543 33 55565
No 308
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.43 E-value=0.12 Score=35.56 Aligned_cols=107 Identities=9% Similarity=-0.017 Sum_probs=68.2
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-c-----ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612 18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-H-----ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG 91 (131)
Q Consensus 18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~-----~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~ 91 (131)
...|.++...+++.+.+ +.. +-+..++..+.+...+.. . ...+.++...++|...+... .+.+..+|..++
T Consensus 449 ~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 449 LLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-GGGVGIYTPDMQ 525 (781)
T ss_dssp CCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-SSCEEEECTTCC
T ss_pred CCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-CCCEEEEeCCCC
Confidence 35688888887776544 444 458889988766533322 1 35688898888888766554 334777888776
Q ss_pred ceEEec-C---CCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 92 ASIFQS-K---ESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 92 ~~~~~~-~---~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
+..... . ....|.++...++|++.+.+. +|.+..||
T Consensus 526 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d 565 (781)
T 3v9f_A 526 LVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPS 565 (781)
T ss_dssp EEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESC
T ss_pred eEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEEC
Confidence 655221 1 245688898888888655543 44324443
No 309
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.40 E-value=0.13 Score=35.46 Aligned_cols=106 Identities=11% Similarity=0.034 Sum_probs=69.3
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI- 94 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~- 94 (131)
..|.++...+++.+.+ |..++-+..++..+++...+.. ....|.++...++|...+... +.+..+|..+++..
T Consensus 407 ~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKVIH 483 (781)
T ss_dssp SBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSSCCE
T ss_pred cceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCeEEe
Confidence 4688888887776544 5555568888887776544432 345688888888887665544 56888998876654
Q ss_pred EecCC-----CCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 95 FQSKE-----SSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 95 ~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
..... ...+.++...++|++.+....+| +..+|
T Consensus 484 ~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~ 521 (781)
T 3v9f_A 484 HYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYT 521 (781)
T ss_dssp EECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEEC
T ss_pred cccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEe
Confidence 22111 46788999988888665543344 44444
No 310
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.39 E-value=0.12 Score=34.99 Aligned_cols=118 Identities=6% Similarity=-0.075 Sum_probs=73.8
Q ss_pred EEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEeec-cccceEEEEEccCCCEEE-E
Q psy15612 2 YLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLHL-HESCVLSLRFAACGKWFV-S 76 (131)
Q Consensus 2 ~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~-~ 76 (131)
+..|+++.+....+ ..-..+..++|++.+..|+.+ ..++.|..+++.+.....+.. ....+..+++.+.+..++ +
T Consensus 18 ~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~t 97 (628)
T 4a0p_A 18 RRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWA 97 (628)
T ss_dssp EEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred EEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEE
Confidence 44566554433222 233468899999876666554 456788888887665544332 224577899887655554 4
Q ss_pred eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEec
Q psy15612 77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~ 119 (131)
-...+.|.+.++...... .....-..+..+++.|....|+.+.
T Consensus 98 D~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD 141 (628)
T 4a0p_A 98 DTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTE 141 (628)
T ss_dssp ETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEE
T ss_pred ECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeC
Confidence 455678899998754443 2224446678999998655555443
No 311
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.36 E-value=0.085 Score=32.98 Aligned_cols=101 Identities=12% Similarity=0.140 Sum_probs=68.9
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-e-EEeecc----ccceEEEEEccCCCEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-K-YQLHLH----ESCVLSLRFAACGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~-~~~~~~----~~~v~~~~~~~~~~~~ 74 (131)
++++|+++.+.++.....+.|.-.+|-.+. .|+.... ..|.-|++.... . ..+..| ...|..-.-+++.+++
T Consensus 89 LQiFnletK~klks~~~~e~VvfWkWis~~-~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~ 166 (365)
T 2xzh_A 89 LQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWL 166 (365)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEECSSS-EEEEEES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEE
T ss_pred EEEechHHhhhhcceecCCccEEEEecCCC-eEEEEcC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEE
Confidence 578999999999988788899999997544 4444333 469999997532 2 233333 3467777778899987
Q ss_pred EEeCC-------CCeEEEeeCCCCceEEecCCCCCe
Q psy15612 75 VSTGK-------DNLLNAWRTPYGASIFQSKESSSV 103 (131)
Q Consensus 75 ~~~~~-------~~~i~~w~~~~~~~~~~~~~~~~v 103 (131)
+..+- .|.+.+|..+.+......+|...-
T Consensus 167 ~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F 202 (365)
T 2xzh_A 167 LLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASF 202 (365)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEE
T ss_pred EEEeEeccCCccceeEEEEeecccccceeeeeeeee
Confidence 64321 366889998877666665554443
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.08 E-value=0.1 Score=31.37 Aligned_cols=97 Identities=18% Similarity=0.134 Sum_probs=52.6
Q ss_pred CCCEEEEEeC-------CCcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCC-----CeEEEeeCCCCce
Q psy15612 29 SGEWLAVGME-------NSNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKD-----NLLNAWRTPYGAS 93 (131)
Q Consensus 29 ~~~~l~~~~~-------~~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~ 93 (131)
+++.++.|+. ...+..||+.+..-..+.. .......+.+ +++.++.++.+ +.+.+||+.+.+.
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 5666666543 2358889988776443321 1111222222 56777777654 4688999988776
Q ss_pred EEecCCC---CCeEEEEECCCCCEEEEecCCC-----cEEEEEe
Q psy15612 94 IFQSKES---SSVLSCDISADDKYIVTGSGDK-----KATVYEV 129 (131)
Q Consensus 94 ~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~-----~i~vw~~ 129 (131)
....... ..-..+. .++++++.|+.++ .+.+||+
T Consensus 233 ~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 233 RQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEET
T ss_pred eeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcC
Confidence 6332211 1111222 2566667766543 4677765
No 313
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.05 E-value=0.1 Score=31.09 Aligned_cols=108 Identities=12% Similarity=0.064 Sum_probs=67.8
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC---C-CeEEee-------ccccceEEEEEccC-CCEEEEeCCCCeEEE
Q psy15612 18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALK---P-DKYQLH-------LHESCVLSLRFAAC-GKWFVSTGKDNLLNA 85 (131)
Q Consensus 18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~---~-~~~~~~-------~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~ 85 (131)
+.....++++|.++.|.++.......+|.... . ...... .....+..++++|. +.+++.+...+.+..
T Consensus 120 N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~ 199 (255)
T 3qqz_A 120 NCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQE 199 (255)
T ss_dssp SSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred cCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEE
Confidence 34568999999987777766555555555531 1 111111 12235678999995 556667777888999
Q ss_pred eeCCCCceE-Ee-cCC--------CCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612 86 WRTPYGASI-FQ-SKE--------SSSVLSCDISADDKYIVTGSGDKKATVY 127 (131)
Q Consensus 86 w~~~~~~~~-~~-~~~--------~~~v~~~~~~~~~~~l~~~~~d~~i~vw 127 (131)
+|.. |+.+ .. ... -.....++|.++|+++++ ++...+..+
T Consensus 200 ~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 200 VTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp ECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred EcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence 9976 5554 21 111 136789999999985555 555544444
No 314
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.93 E-value=0.31 Score=35.53 Aligned_cols=106 Identities=12% Similarity=0.033 Sum_probs=62.9
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe--eccccceEEEEEccC------CCEEEEeCC-CCeEEEeeCCC
Q psy15612 20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL--HLHESCVLSLRFAAC------GKWFVSTGK-DNLLNAWRTPY 90 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~v~~~~~~~~------~~~~~~~~~-~~~i~~w~~~~ 90 (131)
.|...+.+ +.+++.+. .+.+..+++..+.+... ..-...|.|+++.|. .++++.+.+ |++++++++.+
T Consensus 515 ~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 515 NISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp CCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence 45544443 23555554 56777777765443221 223567999998763 368888886 99999999987
Q ss_pred CceEEe--cCCCCCeEEEEEC--CCCCEEEEecCCCcEEEEE
Q psy15612 91 GASIFQ--SKESSSVLSCDIS--ADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 91 ~~~~~~--~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~vw~ 128 (131)
-+.+.. .+....+.++.+. ....++..|-.||.+.-+.
T Consensus 592 l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~ 633 (1158)
T 3ei3_A 592 FELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFG 633 (1158)
T ss_dssp CCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEE
T ss_pred CCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEE
Confidence 665522 2222344444433 2234666777787765444
No 315
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.76 E-value=0.096 Score=30.77 Aligned_cols=63 Identities=8% Similarity=-0.078 Sum_probs=40.9
Q ss_pred cceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE------Eec---CCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612 60 SCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI------FQS---KESSSVLSCDISADDKYIVTGSGDKKATVY 127 (131)
Q Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~------~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 127 (131)
..+.+++|+|+|...+. .++.++-.+..+.... ... +-.. -..+.|.|+|.+.++ .|+.|.-+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKA 112 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEe
Confidence 36779999999986666 6777777776553322 111 1111 367889999998877 45776544
No 316
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.39 E-value=0.23 Score=30.33 Aligned_cols=88 Identities=5% Similarity=-0.055 Sum_probs=51.1
Q ss_pred EEECCCCCEEEEEeC-CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC--CeEEEeeCCCCceEEecCCC
Q psy15612 24 LGYCPSGEWLAVGME-NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD--NLLNAWRTPYGASIFQSKES 100 (131)
Q Consensus 24 ~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~w~~~~~~~~~~~~~~ 100 (131)
.+++|+++.|+..+. ...|...++.+.....+.... .. ..++|++.+|+-.... ..|..-++..+....+..
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~--~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~-- 224 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCN--CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTE-- 224 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSC--EE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSC--
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCC--cc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeC--
Confidence 345778888876655 567888888776655543322 12 2356888888765443 356666666544443322
Q ss_pred CCeEEEEECCCCCEEEEe
Q psy15612 101 SSVLSCDISADDKYIVTG 118 (131)
Q Consensus 101 ~~v~~~~~~~~~~~l~~~ 118 (131)
..+ ..++|++++|+.+
T Consensus 225 ~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 225 ANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp SCE--EEEEEETTEEEEE
T ss_pred CCc--ceEEECCCEEEEE
Confidence 222 2366667766544
No 317
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.31 E-value=0.24 Score=30.02 Aligned_cols=88 Identities=13% Similarity=-0.010 Sum_probs=47.5
Q ss_pred CCCEEEEEeC------CCcEEEEeCCCCCeEEeecc---ccceEEEEEccCCCEEEEeCCCC-----eEEEeeCCCCceE
Q psy15612 29 SGEWLAVGME------NSNVEVLHALKPDKYQLHLH---ESCVLSLRFAACGKWFVSTGKDN-----LLNAWRTPYGASI 94 (131)
Q Consensus 29 ~~~~l~~~~~------~~~v~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~-----~i~~w~~~~~~~~ 94 (131)
+++.++.|+. ...+.+||..+..-..+... ......+.+ +++.++.++.++ .+.+||+.+.+..
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 5666666665 24588899887764333221 111122222 567777776543 4788999888766
Q ss_pred EecCC---CCCeEEEEECCCCCEEEEecC
Q psy15612 95 FQSKE---SSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 95 ~~~~~---~~~v~~~~~~~~~~~l~~~~~ 120 (131)
..... ......+.+ ++++++.|+.
T Consensus 226 ~~~~~p~~r~~~~~~~~--~~~l~v~GG~ 252 (315)
T 4asc_A 226 PFEAFPQERSSLSLVSL--VGTLYAIGGF 252 (315)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEEEEE
T ss_pred ECCCCCCcccceeEEEE--CCEEEEECCc
Confidence 33221 111122222 5566666654
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.30 E-value=0.24 Score=29.87 Aligned_cols=64 Identities=14% Similarity=0.160 Sum_probs=38.9
Q ss_pred CCCEEEEEeCC----CcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCC------CeEEEeeCCCCceE
Q psy15612 29 SGEWLAVGMEN----SNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKD------NLLNAWRTPYGASI 94 (131)
Q Consensus 29 ~~~~l~~~~~~----~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~------~~i~~w~~~~~~~~ 94 (131)
++..++.|+.+ ..+.+||..+..-..+.. .......+.+ +++.++.++.+ ..+.+||..+.+..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 56666776644 568889988776443322 1111222222 56777777654 45889999887765
No 319
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.27 E-value=0.35 Score=31.62 Aligned_cols=106 Identities=11% Similarity=0.133 Sum_probs=70.9
Q ss_pred CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeecc----ccceEEEEEccCCCEE
Q psy15612 1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLH----ESCVLSLRFAACGKWF 74 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~----~~~v~~~~~~~~~~~~ 74 (131)
++++|+++.+.++.....+.|.-..|-.+. .|+... +..|.-|++.... ...+..| ...|..-.-+++.+++
T Consensus 88 lQiFnle~K~klks~~~~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~ 165 (494)
T 1bpo_A 88 LQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWL 165 (494)
T ss_dssp EEEEETTTTEEEEEEECSSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEE
T ss_pred EEEEchHHhhhhcceecCCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeE
Confidence 478999999999888777788888986443 444443 3469999997532 2333333 3467777788999987
Q ss_pred EEeC-------CCCeEEEeeCCCCceEEecCCCCCeEEEEE
Q psy15612 75 VSTG-------KDNLLNAWRTPYGASIFQSKESSSVLSCDI 108 (131)
Q Consensus 75 ~~~~-------~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~ 108 (131)
+..+ -.|.+.+|..+.+......+|......+..
T Consensus 166 ~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~ 206 (494)
T 1bpo_A 166 LLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKM 206 (494)
T ss_dssp EEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEEC
T ss_pred EEEeecccCCcccceEEEeeccccccchheeeeeeeEEEec
Confidence 6432 136788999887766666666554444433
No 320
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.06 E-value=0.28 Score=29.47 Aligned_cols=98 Identities=14% Similarity=0.195 Sum_probs=51.5
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCCeEEeeccc--cceEEEEEccCCCEEEEeCC-------CCeEEEeeCCCCceE
Q psy15612 29 SGEWLAVGMENS-----NVEVLHALKPDKYQLHLHE--SCVLSLRFAACGKWFVSTGK-------DNLLNAWRTPYGASI 94 (131)
Q Consensus 29 ~~~~l~~~~~~~-----~v~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~-------~~~i~~w~~~~~~~~ 94 (131)
+++.++.|+.++ .+.+||+.+..-..+.... ..-..+.. -+++.++.++. ...+..||+.+.+..
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 566667776543 4778888877644332211 11112222 25666666654 245888999887766
Q ss_pred EecCC---CCCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612 95 FQSKE---SSSVLSCDISADDKYIVTGSGD-----KKATVYEV 129 (131)
Q Consensus 95 ~~~~~---~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~ 129 (131)
..... ......+.+ ++++++.|+.+ ..+.+||+
T Consensus 187 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~ 227 (302)
T 2xn4_A 187 YIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDP 227 (302)
T ss_dssp EECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEET
T ss_pred ECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeC
Confidence 33221 111122222 56666676653 24666664
No 321
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.02 E-value=0.32 Score=29.86 Aligned_cols=106 Identities=8% Similarity=0.052 Sum_probs=60.1
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-E
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-F 95 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~ 95 (131)
+.+..+.+.+++..++.+ .++.+.. ....++ -... ......+..+.+.|++..++.+......+..|-...... .
T Consensus 122 ~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~ 199 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH 199 (327)
T ss_dssp SCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE
T ss_pred CCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC
Confidence 456777776666666555 4554433 222232 2222 234456888999999888877765444444443111222 2
Q ss_pred ecCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612 96 QSKESSSVLSCDISADDKYIVTGSGDKKATVY 127 (131)
Q Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 127 (131)
.......+..+.+.++++.++.+ .++.+.+.
T Consensus 200 ~~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s 230 (327)
T 2xbg_A 200 NRTTSRRLHNMGFTPDGRLWMIV-NGGKIAFS 230 (327)
T ss_dssp ECCSSSCEEEEEECTTSCEEEEE-TTTEEEEE
T ss_pred CCCCCCccceeEECCCCCEEEEe-CCceEEEe
Confidence 23445678888898888766544 34555443
No 322
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.99 E-value=0.31 Score=29.49 Aligned_cols=97 Identities=14% Similarity=0.086 Sum_probs=52.7
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCC-----CeEEEeeCCCCceEE
Q psy15612 29 SGEWLAVGMEN-----SNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKD-----NLLNAWRTPYGASIF 95 (131)
Q Consensus 29 ~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~~~ 95 (131)
++++++.|+.+ ..+..||+.+..-..+.. .......+.+ +++.++.++.+ ..+.+||+.+.+...
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 56666666543 458889988776433321 1111222222 56777777654 568899998877663
Q ss_pred ecCCC---CCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612 96 QSKES---SSVLSCDISADDKYIVTGSGD-----KKATVYEV 129 (131)
Q Consensus 96 ~~~~~---~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~ 129 (131)
....+ .....+.+ ++++++.|+.+ ..+.+||+
T Consensus 246 ~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 246 VAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp CCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEET
T ss_pred CCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcC
Confidence 32211 11122222 56666776643 24556664
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.83 E-value=0.34 Score=29.27 Aligned_cols=97 Identities=16% Similarity=0.139 Sum_probs=52.0
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCC-----CeEEEeeCCCCceEE
Q psy15612 29 SGEWLAVGMEN-----SNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKD-----NLLNAWRTPYGASIF 95 (131)
Q Consensus 29 ~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~~~ 95 (131)
+++.++.|+.+ ..+.+||..+..-..+.. .......+.+ +++.++.++.+ +.+..||+.+.+...
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 56666665532 358889988776433321 1111222222 56666676654 458889998877663
Q ss_pred ecCC---CCCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612 96 QSKE---SSSVLSCDISADDKYIVTGSGD-----KKATVYEV 129 (131)
Q Consensus 96 ~~~~---~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~ 129 (131)
.... ...-..+.+ ++++++.|+.+ ..+.+||+
T Consensus 199 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~ 238 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDV 238 (308)
T ss_dssp CCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEET
T ss_pred CCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeC
Confidence 2221 111122222 56666666543 34666664
No 324
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.76 E-value=0.35 Score=29.10 Aligned_cols=97 Identities=12% Similarity=0.055 Sum_probs=51.7
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCCeEEeecc---ccceEEEEEccCCCEEEEeCC---------CCeEEEeeCCC
Q psy15612 29 SGEWLAVGMEN------SNVEVLHALKPDKYQLHLH---ESCVLSLRFAACGKWFVSTGK---------DNLLNAWRTPY 90 (131)
Q Consensus 29 ~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~---------~~~i~~w~~~~ 90 (131)
+++.++.|+.+ ..+.+||..+..-..+... ......+. -+++.++.++. .+.+.+||+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 56666776654 4588899887764433221 11112222 25666666653 34588999988
Q ss_pred CceEEecCCC---CCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612 91 GASIFQSKES---SSVLSCDISADDKYIVTGSGD-----KKATVYEV 129 (131)
Q Consensus 91 ~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~ 129 (131)
.+.......+ ..-..+.+ ++++++.|+.+ ..+.+||+
T Consensus 179 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~ 223 (306)
T 3ii7_A 179 ETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDI 223 (306)
T ss_dssp TEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEET
T ss_pred CeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeC
Confidence 8766332211 11112222 56666666543 24666664
No 325
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.38 E-value=0.54 Score=29.56 Aligned_cols=108 Identities=15% Similarity=0.134 Sum_probs=63.6
Q ss_pred CeEEEEECC--CCC-EEEEE-eC--CCcEEEEeCCCC--Ce---EEeec-cccceEEEEEccCCCEEEEeCC--------
Q psy15612 20 QIFSLGYCP--SGE-WLAVG-ME--NSNVEVLHALKP--DK---YQLHL-HESCVLSLRFAACGKWFVSTGK-------- 79 (131)
Q Consensus 20 ~v~~~~~~~--~~~-~l~~~-~~--~~~v~~~~~~~~--~~---~~~~~-~~~~v~~~~~~~~~~~~~~~~~-------- 79 (131)
....+.+.+ ++. .|+.+ .. +..+.+|++... .. ..+.. .-....++...++|+..++...
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLK 192 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence 566666654 354 34333 22 456777776533 22 12222 2245789999999997766531
Q ss_pred ---------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612 80 ---------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEV 129 (131)
Q Consensus 80 ---------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~ 129 (131)
.+.+..++. ++.......-.....++|+|+++.++.+ +..+.|..|++
T Consensus 193 ~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 193 SWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEK 250 (355)
T ss_dssp HHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred cchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEE
Confidence 234555554 3333333334567899999999877654 44678888886
No 326
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=94.33 E-value=0.59 Score=31.56 Aligned_cols=57 Identities=23% Similarity=0.285 Sum_probs=41.2
Q ss_pred eEEEEEccCCCEEEEeCCC------------CeEEEeeCCCCceE-E-ecCCCCCeEEEEECCCCCEEEEe
Q psy15612 62 VLSLRFAACGKWFVSTGKD------------NLLNAWRTPYGASI-F-QSKESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 62 v~~~~~~~~~~~~~~~~~~------------~~i~~w~~~~~~~~-~-~~~~~~~v~~~~~~~~~~~l~~~ 118 (131)
+--+.|+|.|++++....+ +.+...+..+++.. + .......++.++|+|+++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4569999999987765432 34566677777766 3 33467889999999999987654
No 327
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.18 E-value=0.7 Score=30.13 Aligned_cols=102 Identities=16% Similarity=0.096 Sum_probs=59.6
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCC----eEEee---c------cccceEEEEEccC----CCEEEEeCC-
Q psy15612 19 SQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPD----KYQLH---L------HESCVLSLRFAAC----GKWFVSTGK- 79 (131)
Q Consensus 19 ~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~----~~~~~---~------~~~~v~~~~~~~~----~~~~~~~~~- 79 (131)
.....|+|.|++. .++++...+.|++++..... ...+. . .......++|+|+ +...++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 5677899999986 45556788999999754321 11111 1 1356788999996 443333221
Q ss_pred -C----------CeEEEeeCCC----------CceEEe---cCCCCCeEEEEECCCCCEEEEecC
Q psy15612 80 -D----------NLLNAWRTPY----------GASIFQ---SKESSSVLSCDISADDKYIVTGSG 120 (131)
Q Consensus 80 -~----------~~i~~w~~~~----------~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~ 120 (131)
+ ..|.-|.+.. .+.+.. ......-..++|.|||.+.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 1344455432 112211 123455789999999987776554
No 328
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=94.15 E-value=0.56 Score=33.48 Aligned_cols=34 Identities=15% Similarity=0.152 Sum_probs=29.9
Q ss_pred ceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 61 CVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
.+.++...++..++++-+.|+++++|++.+++++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v 270 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCV 270 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeE
Confidence 4667777888889999999999999999999887
No 329
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.14 E-value=1.4 Score=33.44 Aligned_cols=130 Identities=11% Similarity=0.114 Sum_probs=79.3
Q ss_pred CEEEeCCC-Cceeeee-cC----CCCeEEEEECCCCCEEEEEe-------CCCcEEEEeCCCCCeEEeeccccceEEEEE
Q psy15612 1 MYLQSVSP-GRQLQQH-DF----SSQIFSLGYCPSGEWLAVGM-------ENSNVEVLHALKPDKYQLHLHESCVLSLRF 67 (131)
Q Consensus 1 i~iwd~~~-~~~~~~~-~~----~~~v~~~~~~~~~~~l~~~~-------~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~ 67 (131)
|+-|++.. ..+.+.+ .| +.+|..-..+++.++++..+ -.|.+.+|+.+.+..+.+.+|.+....+..
T Consensus 127 VyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~ 206 (1630)
T 1xi4_A 127 VYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKM 206 (1630)
T ss_pred EEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheecc
Confidence 46688763 2333333 22 35677788889999876533 247788999887776666666655444444
Q ss_pred c--cCC-CEEEEeCC---CCeEEEeeCCCC---ceEEe-------c---CCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 68 A--ACG-KWFVSTGK---DNLLNAWRTPYG---ASIFQ-------S---KESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 68 ~--~~~-~~~~~~~~---~~~i~~w~~~~~---~~~~~-------~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
. +.. ..++.+.+ .+.+++-++... ...+. . ...+.+..+..++....+.....-|.+.++|
T Consensus 207 ~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d 286 (1630)
T 1xi4_A 207 EGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYD 286 (1630)
T ss_pred CCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEe
Confidence 2 222 23333322 357888877432 11111 1 1356677888888877777777889999999
Q ss_pred ee
Q psy15612 129 VI 130 (131)
Q Consensus 129 ~~ 130 (131)
+.
T Consensus 287 ~~ 288 (1630)
T 1xi4_A 287 LE 288 (1630)
T ss_pred cc
Confidence 73
No 330
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.86 E-value=0.68 Score=28.82 Aligned_cols=56 Identities=14% Similarity=0.293 Sum_probs=37.4
Q ss_pred ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-Ee-c----CCCCCeEEEEECCC---CCEEEE
Q psy15612 59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQ-S----KESSSVLSCDISAD---DKYIVT 117 (131)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~-~----~~~~~v~~~~~~~~---~~~l~~ 117 (131)
-.....++|.|+|+.+++ ...+.|.+++ +++.. .. . ........++++|+ +..++.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv 94 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYA 94 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEE
Confidence 445789999999995554 4568899888 44432 11 1 12456889999998 444443
No 331
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.80 E-value=0.6 Score=27.98 Aligned_cols=97 Identities=13% Similarity=0.110 Sum_probs=51.9
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCC---eEEeec---cccceEEEEEccCCCEEEEeCCC-----CeEEEeeCCCCc
Q psy15612 29 SGEWLAVGMEN-----SNVEVLHALKPD---KYQLHL---HESCVLSLRFAACGKWFVSTGKD-----NLLNAWRTPYGA 92 (131)
Q Consensus 29 ~~~~l~~~~~~-----~~v~~~~~~~~~---~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~ 92 (131)
++..++.|+.+ ..+.+||..+.. -..+.. .......+.. +++.++.++.+ +.+.+||..+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 56666766644 458899988776 443322 1111222222 56666676643 358889988877
Q ss_pred eEEecC---CCCCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612 93 SIFQSK---ESSSVLSCDISADDKYIVTGSGD-----KKATVYEV 129 (131)
Q Consensus 93 ~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~ 129 (131)
...... ....-..+.+ +++.++.|+.+ ..+.++|+
T Consensus 140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~ 182 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDP 182 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEET
T ss_pred EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeC
Confidence 652221 1111122222 56666666543 34666664
No 332
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.66 E-value=0.78 Score=28.86 Aligned_cols=125 Identities=6% Similarity=0.085 Sum_probs=69.9
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEEC--CCCC-EEEEEeC---CCcEEEEeCCCC---C-e---EE----eec--cccce
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYC--PSGE-WLAVGME---NSNVEVLHALKP---D-K---YQ----LHL--HESCV 62 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~--~~~~-~l~~~~~---~~~v~~~~~~~~---~-~---~~----~~~--~~~~v 62 (131)
.+|..+.+.....-+|.+.-..+... +... .++.+.. .+++++.++... . . .. +.. ....+
T Consensus 183 QLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFP 262 (365)
T 2xzh_A 183 QLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP 262 (365)
T ss_dssp EEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCE
T ss_pred EEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCce
Confidence 46666644333333555444333332 1222 2333322 257888888543 1 1 11 111 23346
Q ss_pred EEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEec-CCCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy15612 63 LSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISADDKYIVTGSGDKKATV 126 (131)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 126 (131)
.++..++.-..++.-+.-|.+++||+.++.+++.. -..+.|...+-+....-++.....|.|.-
T Consensus 263 Vamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~ 327 (365)
T 2xzh_A 263 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS 327 (365)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEE
T ss_pred EEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEE
Confidence 67888888888888889999999999999999443 34555655554444333444445565543
No 333
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.34 E-value=1.7 Score=31.86 Aligned_cols=124 Identities=11% Similarity=0.143 Sum_probs=67.0
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEE---CCC-CCEEEEEe----------CCCcEEEEeCCCCCeEEe--eccccce
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGY---CPS-GEWLAVGM----------ENSNVEVLHALKPDKYQL--HLHESCV 62 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~---~~~-~~~l~~~~----------~~~~v~~~~~~~~~~~~~--~~~~~~v 62 (131)
|++.|-.+.+.+..+ ..++.+.+++. ..+ ..+++.|. ..|.+.+|++...+...+ ...++.+
T Consensus 809 i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v 888 (1158)
T 3ei3_A 809 LLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV 888 (1158)
T ss_dssp EEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCE
T ss_pred EEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcC
Confidence 466777777776655 44455555553 322 45777664 246799999875554322 3346677
Q ss_pred EEEEEccCCCEEEEeCCCCeEEEeeCCCCceEE-ecCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612 63 LSLRFAACGKWFVSTGKDNLLNAWRTPYGASIF-QSKESSSVLSCDISADDKYIVTGSGDKKATVY 127 (131)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw 127 (131)
.+++-- +|+.++.. ...+++|++...+.+. ....-..+..+.....+++++.|..-..+.+.
T Consensus 889 ~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~ 951 (1158)
T 3ei3_A 889 YSMVEF-NGKLLASI--NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLL 951 (1158)
T ss_dssp EEEEEE-TTEEEEEE--TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEE
T ss_pred EEEeee-CCEEEEEc--CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEE
Confidence 777633 46544433 4679999997655432 11111112222222245666666655444443
No 334
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.03 E-value=0.99 Score=28.18 Aligned_cols=51 Identities=14% Similarity=0.236 Sum_probs=34.4
Q ss_pred ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEe-----cCCCCCeEEEEECCC
Q psy15612 59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-----SKESSSVLSCDISAD 111 (131)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~-----~~~~~~v~~~~~~~~ 111 (131)
-.....++|.|+|+.+++ ..++.|.+++ .+++.... .........++++|+
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pd 83 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPE 83 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTT
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCC
Confidence 345789999999985554 4568898887 44552211 112356889999997
No 335
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=92.64 E-value=1.6 Score=29.54 Aligned_cols=59 Identities=20% Similarity=0.262 Sum_probs=41.8
Q ss_pred cceEEEEEccCCCEEEEeCC------------CCeEEEeeCCCCceE-Eec-CCCCCeEEEEECCCCCEEEEe
Q psy15612 60 SCVLSLRFAACGKWFVSTGK------------DNLLNAWRTPYGASI-FQS-KESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 60 ~~v~~~~~~~~~~~~~~~~~------------~~~i~~w~~~~~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~ 118 (131)
..+..+.|.++|.+.+.... .+.+..++..+++.. +.. .....+..++|+||++.|++.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 34668999999997774321 225667777778776 333 235678999999999988664
No 336
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=92.16 E-value=1.9 Score=29.25 Aligned_cols=58 Identities=10% Similarity=0.040 Sum_probs=40.2
Q ss_pred CeEEEEECCCCCEEEEEeCC------------CcEEEEeCCCCCeEEe-ec-cccceEEEEEccCCCEEEEe
Q psy15612 20 QIFSLGYCPSGEWLAVGMEN------------SNVEVLHALKPDKYQL-HL-HESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~------------~~v~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~~~~ 77 (131)
..--+.|+|.|.+++....+ ..+...+..++++..+ .. ...++..+.|+||++.++..
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 35678999999977765432 2355566667776444 22 35689999999999887654
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.68 E-value=2.3 Score=29.27 Aligned_cols=101 Identities=13% Similarity=0.099 Sum_probs=56.5
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCCeEEeecc--ccceEEEEEccCCCEEEEeCCCC--eEEEeeCCCCceEEecC
Q psy15612 29 SGEWLAVGMEN------SNVEVLHALKPDKYQLHLH--ESCVLSLRFAACGKWFVSTGKDN--LLNAWRTPYGASIFQSK 98 (131)
Q Consensus 29 ~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~--~i~~w~~~~~~~~~~~~ 98 (131)
+++.++.|+.+ ..+.+||..+..-..+... ...-.++....+++.++.|+.++ .+.+||..+.+......
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC
Confidence 66677776643 3477888887664333211 11112333324778878877654 68899998887763321
Q ss_pred ------CCCCeEEEEECCC-CCEEEEecC--C-----CcEEEEEe
Q psy15612 99 ------ESSSVLSCDISAD-DKYIVTGSG--D-----KKATVYEV 129 (131)
Q Consensus 99 ------~~~~v~~~~~~~~-~~~l~~~~~--d-----~~i~vw~~ 129 (131)
....-..+.+..+ ++.++.|+. + ..+.+||+
T Consensus 531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~ 575 (695)
T 2zwa_A 531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKY 575 (695)
T ss_dssp SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEE
T ss_pred CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEc
Confidence 1122223444544 566666664 2 24667775
No 338
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.68 E-value=2.3 Score=29.27 Aligned_cols=92 Identities=9% Similarity=0.016 Sum_probs=50.7
Q ss_pred CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCC--cEEEEeCCCCCeEEeec------cccceEEEEEccC
Q psy15612 1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENS--NVEVLHALKPDKYQLHL------HESCVLSLRFAAC 70 (131)
Q Consensus 1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~--~v~~~~~~~~~~~~~~~------~~~~v~~~~~~~~ 70 (131)
+.+||..+.+-...- .....-.++..-.+++.++.|+.++ .+.+||..+..-..+.. .......+.+..+
T Consensus 470 v~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~ 549 (695)
T 2zwa_A 470 NWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPV 549 (695)
T ss_dssp CEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETT
T ss_pred EEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCC
Confidence 346777665433221 1111111223323777878776644 68999998876443321 1222233555555
Q ss_pred -CCEEEEeCCC-------CeEEEeeCCCCc
Q psy15612 71 -GKWFVSTGKD-------NLLNAWRTPYGA 92 (131)
Q Consensus 71 -~~~~~~~~~~-------~~i~~w~~~~~~ 92 (131)
++.++.|+.+ +.+..||+.+.+
T Consensus 550 ~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 550 SKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 6666777652 458889988877
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.50 E-value=1.5 Score=26.96 Aligned_cols=54 Identities=4% Similarity=-0.167 Sum_probs=27.7
Q ss_pred CcEEEEeCCCCCeEEeeccc--cce-EEEEEccCCCEEEEeCC------CCeEEEeeC--CCCceE
Q psy15612 40 SNVEVLHALKPDKYQLHLHE--SCV-LSLRFAACGKWFVSTGK------DNLLNAWRT--PYGASI 94 (131)
Q Consensus 40 ~~v~~~~~~~~~~~~~~~~~--~~v-~~~~~~~~~~~~~~~~~------~~~i~~w~~--~~~~~~ 94 (131)
..+.+||..+..-..+.... ..- ..+... +++.++.++. ...+..+|+ .+.+..
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~ 232 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWN 232 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEE
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEE
Confidence 46889999877644332211 111 222222 5666666654 335677776 555544
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.30 E-value=1.5 Score=26.51 Aligned_cols=127 Identities=12% Similarity=-0.011 Sum_probs=62.9
Q ss_pred EEEeCCCCceeee-ec-CCCCeEEEEECCCCCEEEEEeC-----C------CcEEEEeCCCCCeEEeeccccc--eEEEE
Q psy15612 2 YLQSVSPGRQLQQ-HD-FSSQIFSLGYCPSGEWLAVGME-----N------SNVEVLHALKPDKYQLHLHESC--VLSLR 66 (131)
Q Consensus 2 ~iwd~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~-----~------~~v~~~~~~~~~~~~~~~~~~~--v~~~~ 66 (131)
..||..+++-... +. ...+........++..++.|+. . ..+..||..+.+-..+...... -..+.
T Consensus 16 ~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 95 (315)
T 4asc_A 16 VAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLG 95 (315)
T ss_dssp EEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEE
T ss_pred EEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEE
Confidence 4678877664321 11 1223333344457777777763 1 1267788887764333221111 11222
Q ss_pred EccCCCEEEEeCCC--------CeEEEeeCCCCceEEecCCC-CCeEEEEECCCCCEEEEecC-C-----CcEEEEEe
Q psy15612 67 FAACGKWFVSTGKD--------NLLNAWRTPYGASIFQSKES-SSVLSCDISADDKYIVTGSG-D-----KKATVYEV 129 (131)
Q Consensus 67 ~~~~~~~~~~~~~~--------~~i~~w~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~-d-----~~i~vw~~ 129 (131)
. -+++.++.++.+ +.+.+||..+.+.......+ ......+...+++.++.|+. + ..+.++|+
T Consensus 96 ~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 172 (315)
T 4asc_A 96 E-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDP 172 (315)
T ss_dssp E-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEET
T ss_pred E-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeC
Confidence 2 256666666632 45888999887765322211 11111112235566666664 2 24666654
No 341
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=90.61 E-value=0.59 Score=29.18 Aligned_cols=93 Identities=10% Similarity=0.018 Sum_probs=51.9
Q ss_pred EEEeCCCCceeeeecCC--CCeEEEEEC--C-CCCEEEEE-eCCCcEEEEeCCCCCeEE-eec----cccceEE---EEE
Q psy15612 2 YLQSVSPGRQLQQHDFS--SQIFSLGYC--P-SGEWLAVG-MENSNVEVLHALKPDKYQ-LHL----HESCVLS---LRF 67 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~--~~v~~~~~~--~-~~~~l~~~-~~~~~v~~~~~~~~~~~~-~~~----~~~~v~~---~~~ 67 (131)
+-.|.++|+.+..+... .++....-. + ++..++.. ..||.+..++..++...- +.. ..+++.. ...
T Consensus 23 ~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv 102 (339)
T 2be1_A 23 HAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVV 102 (339)
T ss_dssp EEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC---
T ss_pred EEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCcee
Confidence 45677888888777433 233221111 1 22333333 578999999987764321 111 1111111 000
Q ss_pred -----ccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 68 -----AACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 68 -----~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
+..+..+++++.++.+...|..+|+.+
T Consensus 103 ~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 103 NDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp -------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred ecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 013556788999999999999999988
No 342
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.48 E-value=2.5 Score=27.51 Aligned_cols=53 Identities=8% Similarity=0.041 Sum_probs=36.1
Q ss_pred ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-Ee-cC-------CCCCeEEEEECCC
Q psy15612 59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQ-SK-------ESSSVLSCDISAD 111 (131)
Q Consensus 59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~-~~-------~~~~v~~~~~~~~ 111 (131)
-.....++|.|+|+.+++-...+.|.+++..+++.. .. .. .......++|+|+
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 345679999999997776655557888876655543 11 11 2356779999995
No 343
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.37 E-value=2.2 Score=26.77 Aligned_cols=55 Identities=15% Similarity=0.121 Sum_probs=39.3
Q ss_pred ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEe-------cCCCCCeEEEEECCC
Q psy15612 57 LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-------SKESSSVLSCDISAD 111 (131)
Q Consensus 57 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~-------~~~~~~v~~~~~~~~ 111 (131)
..-.....++|.|||+.+++--..+.|++++..+++.... .........++++|+
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 3345678999999999777665588999998766654311 123466789999995
No 344
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=89.96 E-value=2.1 Score=25.92 Aligned_cols=126 Identities=12% Similarity=-0.039 Sum_probs=62.0
Q ss_pred EEEeCCCCceeee-ecC-CCCeEEEEECCCCCEEEEEeCC----C-------cEEEEeCCCCCeEEeec---cccceEEE
Q psy15612 2 YLQSVSPGRQLQQ-HDF-SSQIFSLGYCPSGEWLAVGMEN----S-------NVEVLHALKPDKYQLHL---HESCVLSL 65 (131)
Q Consensus 2 ~iwd~~~~~~~~~-~~~-~~~v~~~~~~~~~~~l~~~~~~----~-------~v~~~~~~~~~~~~~~~---~~~~v~~~ 65 (131)
..||..+++-... ... ..+........++..++.|+.. + .+..+|..+.+-..+.. .......+
T Consensus 27 ~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 106 (318)
T 2woz_A 27 VAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLG 106 (318)
T ss_dssp EEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEE
T ss_pred EEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceE
Confidence 4677776654331 111 2222333345567777777731 1 16778887766443321 11111222
Q ss_pred EEccCCCEEEEeCCC-------CeEEEeeCCCCceEEecCCCCCe-EEEEECCCCCEEEEecCC------CcEEEEEe
Q psy15612 66 RFAACGKWFVSTGKD-------NLLNAWRTPYGASIFQSKESSSV-LSCDISADDKYIVTGSGD------KKATVYEV 129 (131)
Q Consensus 66 ~~~~~~~~~~~~~~~-------~~i~~w~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d------~~i~vw~~ 129 (131)
.. +++.++.|+.+ ..+.+||..+.+.......+... ...+...++++++.|+.+ ..+.++|+
T Consensus 107 ~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 107 EV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp EE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEET
T ss_pred EE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcC
Confidence 22 56666666543 34788898887766332222111 111112356666666531 24666664
No 345
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=89.93 E-value=2.2 Score=26.14 Aligned_cols=105 Identities=12% Similarity=0.101 Sum_probs=60.9
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEE-eCCCCCeEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 17 FSSQIFSLGYCPSGEWLAVGMENSNVEVL-HALKPDKYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~-~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
....+..+.+.|++..++.+. .+.+..- |-....-..+ ......+..+.+.++++.++.+ .++.+...+...++.-
T Consensus 161 ~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~G~tW 238 (327)
T 2xbg_A 161 AIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDNSENW 238 (327)
T ss_dssp CCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTEEEEE
T ss_pred CCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEe-CCceEEEecCCCCCee
Confidence 445688899999888776664 4444443 3212222222 2334567888899988766554 4666666542223322
Q ss_pred -Ee-cC---CCCCeEEEEECCCCCEEEEecCCCcE
Q psy15612 95 -FQ-SK---ESSSVLSCDISADDKYIVTGSGDKKA 124 (131)
Q Consensus 95 -~~-~~---~~~~v~~~~~~~~~~~l~~~~~d~~i 124 (131)
.. .+ ....+..+.+.++++.++.+. ++.+
T Consensus 239 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 239 GELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp CCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred EeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 11 11 234578899988877776654 4544
No 346
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=89.10 E-value=3.9 Score=27.78 Aligned_cols=59 Identities=10% Similarity=0.084 Sum_probs=41.4
Q ss_pred CCeEEEEECCCCCEEEEEeCC------------CcEEEEeCCCCCeEEeec--cccceEEEEEccCCCEEEEe
Q psy15612 19 SQIFSLGYCPSGEWLAVGMEN------------SNVEVLHALKPDKYQLHL--HESCVLSLRFAACGKWFVST 77 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~------------~~v~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~ 77 (131)
.....+.|.++|.+.+..... ..+..++..++++..+.. ...++..++|+||++.|++.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 456789999999877744321 246667777777655432 23578999999999987765
No 347
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.79 E-value=2.6 Score=25.48 Aligned_cols=65 Identities=11% Similarity=0.026 Sum_probs=37.1
Q ss_pred CCCEEEEEeCC-------CcEEEEeCCCCCeEEeeccccc--eEEEEEccCCCEEEEeCC------CCeEEEeeCCCCce
Q psy15612 29 SGEWLAVGMEN-------SNVEVLHALKPDKYQLHLHESC--VLSLRFAACGKWFVSTGK------DNLLNAWRTPYGAS 93 (131)
Q Consensus 29 ~~~~l~~~~~~-------~~v~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~~------~~~i~~w~~~~~~~ 93 (131)
+++.++.|+.+ ..+.+||..+.+-..+...+.. -..+.. .+++.++.++. .+.+.+||+.+.+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 56666666653 2477888887764433221111 112222 35666666654 24588999988876
Q ss_pred E
Q psy15612 94 I 94 (131)
Q Consensus 94 ~ 94 (131)
.
T Consensus 188 ~ 188 (318)
T 2woz_A 188 K 188 (318)
T ss_dssp E
T ss_pred E
Confidence 6
No 348
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=87.66 E-value=0.66 Score=33.77 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=27.9
Q ss_pred eEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 62 VLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 62 v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
+.++...++..++++-+.|+++++|++.+++++
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v 272 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCV 272 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeE
Confidence 445556678889999999999999999999887
No 349
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=84.70 E-value=1.5 Score=27.43 Aligned_cols=64 Identities=5% Similarity=-0.065 Sum_probs=36.6
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEe-ecc-ccceEEEEE--cc-CCCEEEEe-CCCCeEEEeeCCCCceE
Q psy15612 31 EWLAVGMENSNVEVLHALKPDKYQL-HLH-ESCVLSLRF--AA-CGKWFVST-GKDNLLNAWRTPYGASI 94 (131)
Q Consensus 31 ~~l~~~~~~~~v~~~~~~~~~~~~~-~~~-~~~v~~~~~--~~-~~~~~~~~-~~~~~i~~w~~~~~~~~ 94 (131)
..++.++.||.|.-+|..+++..=. ... ..++....- .+ ++..++.. ..||.+..++..+|...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK 80 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE
Confidence 3677788889888888887775221 111 112211110 01 22333333 67999999998887554
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.35 E-value=1.9 Score=30.89 Aligned_cols=33 Identities=15% Similarity=0.086 Sum_probs=28.8
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe
Q psy15612 20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK 52 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~ 52 (131)
.+.++...++..++++-+.|+++++|++.++.+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCe
Confidence 467777888888999999999999999998875
No 351
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=83.31 E-value=7.8 Score=25.67 Aligned_cols=125 Identities=6% Similarity=0.073 Sum_probs=73.3
Q ss_pred EEEeCCCCceeeeecCCCCeEEEEECCC--C-CEEEEEeCC---CcEEEEeCCCC---C--e--EEe----e--ccccce
Q psy15612 2 YLQSVSPGRQLQQHDFSSQIFSLGYCPS--G-EWLAVGMEN---SNVEVLHALKP---D--K--YQL----H--LHESCV 62 (131)
Q Consensus 2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~--~-~~l~~~~~~---~~v~~~~~~~~---~--~--~~~----~--~~~~~v 62 (131)
.+|..+.+.....-+|.+.-..+....+ . +.++.+... +++++.++... . . ... . .....+
T Consensus 182 QLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFP 261 (494)
T 1bpo_A 182 QLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP 261 (494)
T ss_dssp EEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCE
T ss_pred EEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCce
Confidence 4666665444433356555544444321 1 233334332 68899888543 1 1 111 1 123346
Q ss_pred EEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEe-cCCCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy15612 63 LSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISADDKYIVTGSGDKKATV 126 (131)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 126 (131)
..+..++.-..++.-+.-|.++++|+.++.+++. .-....|...+-+....-++.....|.|.-
T Consensus 262 vamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~ 326 (494)
T 1bpo_A 262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS 326 (494)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEE
T ss_pred eEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEE
Confidence 6788888888888888999999999999999943 335556655555544444545556665543
No 352
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=81.31 E-value=2.4 Score=29.49 Aligned_cols=31 Identities=13% Similarity=0.241 Sum_probs=25.5
Q ss_pred eEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 62 VLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 62 v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
|.++.+ +..++++-+.|+++++|++.+++++
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv 254 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLI 254 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceE
Confidence 444444 4779999999999999999999876
No 353
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=79.72 E-value=19 Score=27.86 Aligned_cols=48 Identities=6% Similarity=0.125 Sum_probs=33.3
Q ss_pred ceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEec-CCCCCeEEEEE
Q psy15612 61 CVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDI 108 (131)
Q Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~-~~~~~v~~~~~ 108 (131)
.+..+..++.-..++.-+.-|.+.++|+.+|.+++.. -....|...+-
T Consensus 260 fpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~ 308 (1630)
T 1xi4_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAP 308 (1630)
T ss_pred cceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEecc
Confidence 3556777777777888888999999999999988332 23344443333
No 354
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.61 E-value=1.6 Score=31.94 Aligned_cols=29 Identities=21% Similarity=0.135 Sum_probs=23.2
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612 102 SVLSCDISADDKYIVTGSGDKKATVYEVI 130 (131)
Q Consensus 102 ~v~~~~~~~~~~~l~~~~~d~~i~vw~~~ 130 (131)
.+.+++..++..++++.+.|+++++|++.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~ 267 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLS 267 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETT
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECC
Confidence 34455566788899999999999999973
No 355
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=77.24 E-value=15 Score=25.37 Aligned_cols=105 Identities=13% Similarity=0.071 Sum_probs=60.0
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc------ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612 19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH------ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA 92 (131)
Q Consensus 19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~ 92 (131)
..|.++...+++.+.+ +...| +..++..+.....+... ...|.++...+++..+-.++. +.+..++..+++
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~ 222 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ 222 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTE
T ss_pred CeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe
Confidence 4577888777776554 44444 77788776654332211 124777777766664333443 457888887765
Q ss_pred eE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 93 SI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 93 ~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
.. ........|.++...++|.+.+.. .+| +.+++
T Consensus 223 ~~~~~~l~~~~i~~i~~d~~g~lWigT-~~G-l~~~~ 257 (758)
T 3ott_A 223 IKQTEAFHNNSIKSLALDGNGDLLAGT-DNG-LYVYH 257 (758)
T ss_dssp EEEEEEEEEEEEEEEEECTTCCEEEEE-TTE-EEEEC
T ss_pred EEeccCCCCCeEEEEEEcCCCCEEEEe-CCc-eeEEe
Confidence 44 211123457778777777765443 333 44443
No 356
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=75.28 E-value=12 Score=23.26 Aligned_cols=69 Identities=13% Similarity=0.124 Sum_probs=43.8
Q ss_pred ceEEEEEcc-------CCCEEEEeCCCCeEEEeeCCCCceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 61 CVLSLRFAA-------CGKWFVSTGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 61 ~v~~~~~~~-------~~~~~~~~~~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+..+.|.. +|++++..-..+.|...++..++.. ........+..+++.|+|.++++.. +..=+||.+
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td-~~~g~I~ri 350 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD-ESSGELLKV 350 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC-STTEEEEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe-CCCCEEEEE
Confidence 456677753 4677777666777877777655433 2223346899999999999666543 223356655
Q ss_pred e
Q psy15612 130 I 130 (131)
Q Consensus 130 ~ 130 (131)
.
T Consensus 351 ~ 351 (353)
T 2g8s_A 351 S 351 (353)
T ss_dssp E
T ss_pred e
Confidence 4
No 357
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=70.23 E-value=16 Score=22.41 Aligned_cols=52 Identities=19% Similarity=0.219 Sum_probs=27.8
Q ss_pred CCCEEEEEeC----------CCcEEEEeCCCCCeEEeecc--ccceEEEEEccCCCEEEEeCCC
Q psy15612 29 SGEWLAVGME----------NSNVEVLHALKPDKYQLHLH--ESCVLSLRFAACGKWFVSTGKD 80 (131)
Q Consensus 29 ~~~~l~~~~~----------~~~v~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~ 80 (131)
++++++.|+. ...+.+||..+.+-..+... ...........+++.++.++.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 5666666654 14588899987764433221 1111111122467777777754
No 358
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=65.88 E-value=16 Score=25.74 Aligned_cols=30 Identities=13% Similarity=0.105 Sum_probs=24.3
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe
Q psy15612 21 IFSLGYCPSGEWLAVGMENSNVEVLHALKPDK 52 (131)
Q Consensus 21 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~ 52 (131)
|.++.+ +..++++-+.|.++++|++.++.+
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~l 253 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTL 253 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCce
Confidence 444444 477999999999999999999874
No 359
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=55.70 E-value=41 Score=22.12 Aligned_cols=52 Identities=8% Similarity=0.067 Sum_probs=33.5
Q ss_pred cceEEEEEccCCC-EEEEeCCCCeEEEeeCCCCc---eEE-e---cC------CCCCeEEEEECCC
Q psy15612 60 SCVLSLRFAACGK-WFVSTGKDNLLNAWRTPYGA---SIF-Q---SK------ESSSVLSCDISAD 111 (131)
Q Consensus 60 ~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~~~---~~~-~---~~------~~~~v~~~~~~~~ 111 (131)
.....|+|.|+|. .++++.+.+.|++++..... ... + .. .......++++|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4567899999986 45556678899999754221 111 1 11 1356788999996
No 360
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=47.39 E-value=61 Score=21.66 Aligned_cols=54 Identities=6% Similarity=0.102 Sum_probs=34.7
Q ss_pred EEEEEeCCCcEEEEeCC-CC-----C---eEEee--ccccceEEEEEccCCCEEEEeCCCCeEEE
Q psy15612 32 WLAVGMENSNVEVLHAL-KP-----D---KYQLH--LHESCVLSLRFAACGKWFVSTGKDNLLNA 85 (131)
Q Consensus 32 ~l~~~~~~~~v~~~~~~-~~-----~---~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~~ 85 (131)
.+..|..+|.|.-.-+. .. . ...+. ....+|..+.++++..+++.++..+.+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 35667888887654432 11 1 12222 23567899999999999999988776554
No 361
>2loj_A Putative cytoplasmic protein; pathogenic bacterial protein, PSI-biology, northeast structu genomics consortium (NESG); NMR {Salmonella enterica subsp}
Probab=45.55 E-value=23 Score=16.22 Aligned_cols=22 Identities=23% Similarity=0.244 Sum_probs=14.4
Q ss_pred eecCCCCeEEEEECCCCCEEEE
Q psy15612 14 QHDFSSQIFSLGYCPSGEWLAV 35 (131)
Q Consensus 14 ~~~~~~~v~~~~~~~~~~~l~~ 35 (131)
.+.|.+..+.+.....|+++++
T Consensus 41 ~I~H~G~~Y~LR~Tr~GKLILT 62 (63)
T 2loj_A 41 IIDHNGQEYLLRKTQAGKLLLT 62 (63)
T ss_dssp EEEETTEEEEEEEETTTEEEEE
T ss_pred EEEeCCeEEEeEEccCCceeec
Confidence 3457777777777766766653
No 362
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=44.45 E-value=23 Score=20.17 Aligned_cols=31 Identities=10% Similarity=0.114 Sum_probs=18.6
Q ss_pred CCeEEEEECCCCC-EEEEecCCCcEEEEEeeC
Q psy15612 101 SSVLSCDISADDK-YIVTGSGDKKATVYEVIY 131 (131)
Q Consensus 101 ~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~~ 131 (131)
..+.++.|...+. -+++.+.++++.++|.+|
T Consensus 119 ~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~ 150 (188)
T 1ukf_A 119 KHLLSLRFANVQGHAIACSCEGSQFKLFDPNL 150 (188)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTEEEEEETTT
T ss_pred ceEEEEEecCCCceeEEeccCCCeEEEeCCCC
Confidence 3344455554332 344455678899999876
No 363
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=44.45 E-value=61 Score=20.83 Aligned_cols=118 Identities=8% Similarity=0.069 Sum_probs=68.1
Q ss_pred CEEEeCCCCceeeeec----C---------------CCCeEEEEECCC----CCEEEEEeCCC-cEEEEe---CCCCCe-
Q psy15612 1 MYLQSVSPGRQLQQHD----F---------------SSQIFSLGYCPS----GEWLAVGMENS-NVEVLH---ALKPDK- 52 (131)
Q Consensus 1 i~iwd~~~~~~~~~~~----~---------------~~~v~~~~~~~~----~~~l~~~~~~~-~v~~~~---~~~~~~- 52 (131)
|.++|+.+++..+.+. . ...+..++++|+ ++.|......+ .+.-.. ++....
T Consensus 183 LIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~ 262 (381)
T 3q6k_A 183 LFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGK 262 (381)
T ss_dssp EEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCC
T ss_pred EEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchh
Confidence 3577887776654431 1 236788999987 67776665544 232222 111111
Q ss_pred --EEeeccc---cceEEEEEc-cCCCEEEEeCCCCeEEEeeCCC-C----ceE--EecCCCCCeEEEEECCCCCEEEEe
Q psy15612 53 --YQLHLHE---SCVLSLRFA-ACGKWFVSTGKDNLLNAWRTPY-G----ASI--FQSKESSSVLSCDISADDKYIVTG 118 (131)
Q Consensus 53 --~~~~~~~---~~v~~~~~~-~~~~~~~~~~~~~~i~~w~~~~-~----~~~--~~~~~~~~v~~~~~~~~~~~l~~~ 118 (131)
.+..+.. ..-..+++. .+|..+++--..+.|..|+..+ . ... .....-..+..+.+.++|.+.+..
T Consensus 263 ~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 263 LNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred hceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 1112222 333456675 6788888888889999999875 1 111 222333557788888887755554
No 364
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=40.31 E-value=91 Score=21.69 Aligned_cols=95 Identities=13% Similarity=0.039 Sum_probs=54.9
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-----cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612 20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-----HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94 (131)
Q Consensus 20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~ 94 (131)
.|.++.. .++ .|..+..+ -+..++..+.+...+.. ....|.++...++|...+.. . +.+..++..+++..
T Consensus 104 ~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~~ 178 (758)
T 3ott_A 104 DVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGT-Y-NGLCRYIPSNGKFE 178 (758)
T ss_dssp CEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEE-T-TEEEEEETTTTEEE
T ss_pred eEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEe-C-CCHhhCccCCCceE
Confidence 4666544 344 45555555 47888887766544311 13457788777778876644 3 35778887766544
Q ss_pred E-ecC-----CCCCeEEEEECCCCCEEEEec
Q psy15612 95 F-QSK-----ESSSVLSCDISADDKYIVTGS 119 (131)
Q Consensus 95 ~-~~~-----~~~~v~~~~~~~~~~~l~~~~ 119 (131)
. ... ....|.++...+++..+..+.
T Consensus 179 ~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt 209 (758)
T 3ott_A 179 GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT 209 (758)
T ss_dssp EECCCCCTTCSSCCEEEEEEETTTTEEEEEE
T ss_pred EecCCCccccccceeEEEEEECCCCEEEEEE
Confidence 2 111 123477887777666443333
No 365
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=38.54 E-value=71 Score=19.90 Aligned_cols=112 Identities=11% Similarity=0.127 Sum_probs=63.9
Q ss_pred cCCCCeEEEEECC---CCCEEEEEeCCCcEEEEeCCCCC------e--EEeeccccceEEEEEccCCCEEEEeCCCCeEE
Q psy15612 16 DFSSQIFSLGYCP---SGEWLAVGMENSNVEVLHALKPD------K--YQLHLHESCVLSLRFAACGKWFVSTGKDNLLN 84 (131)
Q Consensus 16 ~~~~~v~~~~~~~---~~~~l~~~~~~~~v~~~~~~~~~------~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~ 84 (131)
...+.|.++..-+ ++..++..+.+|.++...+.... . ..+.. ...+..+........++..+..|.+.
T Consensus 92 ~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~ 170 (327)
T 3uc1_A 92 QPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSI 170 (327)
T ss_dssp CTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEE
T ss_pred CCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEE
Confidence 3445565554432 57788999999999988764321 1 11222 23344444444445566666677766
Q ss_pred EeeCC--C----Cce---E--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612 85 AWRTP--Y----GAS---I--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128 (131)
Q Consensus 85 ~w~~~--~----~~~---~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~ 128 (131)
.+... . ++. . ........|..+..-+.+..++..+..|.++.-.
T Consensus 171 rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~ 225 (327)
T 3uc1_A 171 RFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTA 225 (327)
T ss_dssp EEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEE
T ss_pred EEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEE
Confidence 66554 1 111 1 2223456677776666666777777888776544
No 366
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=38.08 E-value=79 Score=20.32 Aligned_cols=129 Identities=4% Similarity=0.034 Sum_probs=72.9
Q ss_pred CEEEeCCCC--ceeeeecC-------CCCeEEEEEC---CC----CCEEEEEe-CCCcEEEEeCCCCCeEEeec-----c
Q psy15612 1 MYLQSVSPG--RQLQQHDF-------SSQIFSLGYC---PS----GEWLAVGM-ENSNVEVLHALKPDKYQLHL-----H 58 (131)
Q Consensus 1 i~iwd~~~~--~~~~~~~~-------~~~v~~~~~~---~~----~~~l~~~~-~~~~v~~~~~~~~~~~~~~~-----~ 58 (131)
|-+||+.++ +.++.+.. ......+.+. |. +.+...+. ..+-+.++|+.+++..++.. .
T Consensus 125 Lv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd 204 (381)
T 3q6k_A 125 IVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAE 204 (381)
T ss_dssp EEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCC
T ss_pred EEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccc
Confidence 357899998 88877632 2346777776 32 33444443 35679999998876422221 0
Q ss_pred --------------ccceEEEEEccC----CCEEEEeCCCC-eEEEee---CCCCc---eEEecC-C--CCCeEEEEEC-
Q psy15612 59 --------------ESCVLSLRFAAC----GKWFVSTGKDN-LLNAWR---TPYGA---SIFQSK-E--SSSVLSCDIS- 109 (131)
Q Consensus 59 --------------~~~v~~~~~~~~----~~~~~~~~~~~-~i~~w~---~~~~~---~~~~~~-~--~~~v~~~~~~- 109 (131)
...+..++++|+ ++.++...-.+ .+.-.. ++++. .....+ . ...-..++..
T Consensus 205 ~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~ 284 (381)
T 3q6k_A 205 RPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDP 284 (381)
T ss_dssp SCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECT
T ss_pred cCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeC
Confidence 135667888887 66666543322 232222 12211 111111 1 1333456675
Q ss_pred CCCCEEEEecCCCcEEEEEe
Q psy15612 110 ADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 110 ~~~~~l~~~~~d~~i~vw~~ 129 (131)
.+|.++++--....|..|+.
T Consensus 285 ~~G~ly~~~~~~~aI~~w~~ 304 (381)
T 3q6k_A 285 KTKVIFFAEANTKQVSCWNT 304 (381)
T ss_dssp TTCEEEEEESSSSEEEEEET
T ss_pred CCCeEEEEeccCCeEEEEeC
Confidence 67887777777788999975
No 367
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=36.16 E-value=86 Score=21.24 Aligned_cols=66 Identities=12% Similarity=0.170 Sum_probs=39.3
Q ss_pred CeEEEEECCCCC--EEEEEeCCCcEEEEeCCCCC----e-EEe--eccccceE-EEEEccCCCEEEEeCCCCeEEE
Q psy15612 20 QIFSLGYCPSGE--WLAVGMENSNVEVLHALKPD----K-YQL--HLHESCVL-SLRFAACGKWFVSTGKDNLLNA 85 (131)
Q Consensus 20 ~v~~~~~~~~~~--~l~~~~~~~~v~~~~~~~~~----~-~~~--~~~~~~v~-~~~~~~~~~~~~~~~~~~~i~~ 85 (131)
...+++....+. .+..|..+|.|.-..+.... . ..+ .....+|. .+.+++++..++.++..+.+++
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 455555544333 45677888887655443221 1 112 22245664 8899999999998887765554
No 368
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=35.14 E-value=1.2e+02 Score=21.38 Aligned_cols=54 Identities=6% Similarity=0.060 Sum_probs=34.1
Q ss_pred EEEEEeCCCcEEEE-eCCCCC--------eEE--eeccccceEEEEEccCCCEEEEeCCCCeEEE
Q psy15612 32 WLAVGMENSNVEVL-HALKPD--------KYQ--LHLHESCVLSLRFAACGKWFVSTGKDNLLNA 85 (131)
Q Consensus 32 ~l~~~~~~~~v~~~-~~~~~~--------~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~ 85 (131)
.+..|..+|.|.-. ...... +.. +......|..+.++++...|+.++..+.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 45678888887532 221111 111 2235567889999999999999988776554
No 369
>2jra_A Protein RPA2121; domain-swapped dimer, structural genomics, PSI, protein STRU initiative, northeast structural genomics consortium; NMR {Rhodopseudomonas palustris}
Probab=34.27 E-value=39 Score=15.66 Aligned_cols=22 Identities=5% Similarity=0.090 Sum_probs=16.1
Q ss_pred eecCCCCeEEEEECCCCCEEEE
Q psy15612 14 QHDFSSQIFSLGYCPSGEWLAV 35 (131)
Q Consensus 14 ~~~~~~~v~~~~~~~~~~~l~~ 35 (131)
.+.|.+..+.+.....|+++++
T Consensus 45 ~I~H~G~~Y~LR~Tr~GKLILT 66 (67)
T 2jra_A 45 VIAHGDDRYRLRLTSQNKLILT 66 (67)
T ss_dssp EEEETTEEEEEEECTTSCEEEE
T ss_pred EEEeCCeEEEeEEccCCceeec
Confidence 3467788888888877777654
No 370
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=30.31 E-value=58 Score=16.39 Aligned_cols=15 Identities=13% Similarity=0.282 Sum_probs=11.7
Q ss_pred CEEEeCCCCceeeee
Q psy15612 1 MYLQSVSPGRQLQQH 15 (131)
Q Consensus 1 i~iwd~~~~~~~~~~ 15 (131)
|.+||..+|+...++
T Consensus 19 V~IvNvnNG~RfeTY 33 (97)
T 1uhe_A 19 VEIVDVNNGERFSTY 33 (97)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCceEEEE
Confidence 468888888888776
No 371
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=29.49 E-value=1.5e+02 Score=20.82 Aligned_cols=54 Identities=13% Similarity=0.134 Sum_probs=33.4
Q ss_pred EEEEeCCCCeEE-EeeCCCCceE----EecCCCCCeEEEEECCCC--CEEEEecCCCcEEE
Q psy15612 73 WFVSTGKDNLLN-AWRTPYGASI----FQSKESSSVLSCDISADD--KYIVTGSGDKKATV 126 (131)
Q Consensus 73 ~~~~~~~~~~i~-~w~~~~~~~~----~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~v 126 (131)
.+..|..+|.|. +.....+... .....+.+|..+.++++. .+|+.++..+-+++
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 355667777654 3343333222 233456788899999987 88888887665443
No 372
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=29.20 E-value=60 Score=16.28 Aligned_cols=15 Identities=13% Similarity=0.299 Sum_probs=11.7
Q ss_pred CEEEeCCCCceeeee
Q psy15612 1 MYLQSVSPGRQLQQH 15 (131)
Q Consensus 1 i~iwd~~~~~~~~~~ 15 (131)
|.+||..+|+...++
T Consensus 20 V~IvNvnNG~Rf~TY 34 (96)
T 1vc3_B 20 VDIYDITNGARLTTY 34 (96)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCceEEEE
Confidence 468888888888776
No 373
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=29.15 E-value=87 Score=21.97 Aligned_cols=32 Identities=9% Similarity=0.081 Sum_probs=23.0
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy15612 16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL 48 (131)
Q Consensus 16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~ 48 (131)
....+|..|.++++...|..++..+-+++ .+.
T Consensus 467 ~~~~pI~~L~ld~~~~~LYV~t~~~V~kV-Pl~ 498 (667)
T 4gz8_A 467 REPTTISAMELSTKQQQLYIGSTAGVAQL-PLH 498 (667)
T ss_dssp SSCCCCCEEEEETTTTEEEEEBSSCEEEE-ESC
T ss_pred CCCceeeeEEEcCCCCEEEEEECCEEEEE-Ehh
Confidence 44567888999999999988877664443 443
No 374
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=28.72 E-value=1e+02 Score=18.63 Aligned_cols=113 Identities=9% Similarity=0.033 Sum_probs=63.2
Q ss_pred ecCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCC-----eE--EeeccccceEEEEEccCCCEEEEeCCCCeEEE
Q psy15612 15 HDFSSQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPD-----KY--QLHLHESCVLSLRFAACGKWFVSTGKDNLLNA 85 (131)
Q Consensus 15 ~~~~~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~-----~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~ 85 (131)
+...+.|..+.. + ++..++..+.+|.++...+.... .. .+.. ...+..+........++..+..|.+..
T Consensus 64 l~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r 141 (276)
T 3no0_A 64 KSREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVAR 141 (276)
T ss_dssp SSTTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEE
T ss_pred CCCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEE
Confidence 334455666544 4 46788888999999888764331 11 1222 234444444444556666777777666
Q ss_pred eeCC---C-C---c--eEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 86 WRTP---Y-G---A--SIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 86 w~~~---~-~---~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
+... . + + ........+.+..+...+++..++..+..|.++...+
T Consensus 142 ~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~ 194 (276)
T 3no0_A 142 FSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISH 194 (276)
T ss_dssp EEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEG
T ss_pred EEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEH
Confidence 6532 1 1 1 1122234466666655555667777777777766543
No 375
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=27.93 E-value=1.1e+02 Score=19.08 Aligned_cols=19 Identities=16% Similarity=0.160 Sum_probs=12.5
Q ss_pred CCCeEEEEECC--CCCEEEEE
Q psy15612 18 SSQIFSLGYCP--SGEWLAVG 36 (131)
Q Consensus 18 ~~~v~~~~~~~--~~~~l~~~ 36 (131)
...|.++.+.| ++...+.+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~ 74 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAA 74 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEE
T ss_pred CCceEEEEECCCCCCeEEEEe
Confidence 34689999998 44444443
No 376
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=27.82 E-value=63 Score=16.09 Aligned_cols=14 Identities=7% Similarity=0.109 Sum_probs=8.0
Q ss_pred EeCCCCeEEEeeCC
Q psy15612 76 STGKDNLLNAWRTP 89 (131)
Q Consensus 76 ~~~~~~~i~~w~~~ 89 (131)
.-..||.+.++|..
T Consensus 56 ~l~~dGnLvL~d~~ 69 (105)
T 4h3o_A 56 VLQSDGNFVVYDSS 69 (105)
T ss_dssp EECTTSCEEEECTT
T ss_pred EEeCCccEEEECCC
Confidence 33456666666643
No 377
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=27.46 E-value=1.4e+02 Score=19.98 Aligned_cols=28 Identities=18% Similarity=0.330 Sum_probs=22.7
Q ss_pred CCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy15612 99 ESSSVLSCDISADDKYIVTGSGDKKATV 126 (131)
Q Consensus 99 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v 126 (131)
.+.+|..+.++++..+|+.++.++-++|
T Consensus 460 ~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 460 EPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp SCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 4678899999999999999888765543
No 378
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=27.05 E-value=1.1e+02 Score=18.75 Aligned_cols=111 Identities=9% Similarity=0.117 Sum_probs=61.9
Q ss_pred CCCeEEEEECC---CCCEEEEEeCCCcEEEEeCCCCC------e--EEeeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612 18 SSQIFSLGYCP---SGEWLAVGMENSNVEVLHALKPD------K--YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAW 86 (131)
Q Consensus 18 ~~~v~~~~~~~---~~~~l~~~~~~~~v~~~~~~~~~------~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w 86 (131)
.+.|..+...+ +...++..+..|.++...+.... . ..+.. ...+..+....+...++..+..|....+
T Consensus 99 ~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~ 177 (312)
T 1suu_A 99 QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIF 177 (312)
T ss_dssp TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEE
Confidence 34455443322 45667778888988887764221 1 11222 3445555554445567677778877777
Q ss_pred eCCC----Cc---eE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612 87 RTPY----GA---SI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129 (131)
Q Consensus 87 ~~~~----~~---~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~ 129 (131)
.... ++ -. ......+.+..+..-+++..+++.+..|..+..++
T Consensus 178 ~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~ 229 (312)
T 1suu_A 178 NSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNM 229 (312)
T ss_dssp EGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEG
T ss_pred EHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEH
Confidence 6432 11 11 22234566666665555566767777777776654
No 379
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=26.16 E-value=73 Score=16.20 Aligned_cols=15 Identities=13% Similarity=0.301 Sum_probs=11.8
Q ss_pred CEEEeCCCCceeeee
Q psy15612 1 MYLQSVSPGRQLQQH 15 (131)
Q Consensus 1 i~iwd~~~~~~~~~~ 15 (131)
|.+||+.+|+...++
T Consensus 20 V~I~NvnNG~Rf~TY 34 (102)
T 3plx_B 20 VQVVNVNNGARFETY 34 (102)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEE
Confidence 468888888888776
No 380
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=25.49 E-value=79 Score=16.41 Aligned_cols=15 Identities=13% Similarity=0.332 Sum_probs=10.8
Q ss_pred CEEEeCCCCceeeee
Q psy15612 1 MYLQSVSPGRQLQQH 15 (131)
Q Consensus 1 i~iwd~~~~~~~~~~ 15 (131)
|.+||+.+|+...++
T Consensus 47 V~I~NvnNG~Rf~TY 61 (114)
T 3oug_A 47 VQVVNLNNGERLETY 61 (114)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCceEEEE
Confidence 467888888777665
No 381
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=25.16 E-value=78 Score=16.20 Aligned_cols=14 Identities=14% Similarity=-0.002 Sum_probs=7.7
Q ss_pred EEEeCCCCeEEEee
Q psy15612 74 FVSTGKDNLLNAWR 87 (131)
Q Consensus 74 ~~~~~~~~~i~~w~ 87 (131)
.+.-..+|.+.++|
T Consensus 64 ~l~l~~dGNLVl~d 77 (119)
T 1b2p_A 64 RAVLQPDGVLVVIT 77 (119)
T ss_dssp EEEECTTSCEEEEC
T ss_pred EEEEccCCEEEEEe
Confidence 33444566666666
No 382
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=23.33 E-value=98 Score=16.72 Aligned_cols=15 Identities=13% Similarity=0.268 Sum_probs=11.4
Q ss_pred CEEEeCCCCceeeee
Q psy15612 1 MYLQSVSPGRQLQQH 15 (131)
Q Consensus 1 i~iwd~~~~~~~~~~ 15 (131)
|.+||..+|+...++
T Consensus 44 V~IvNvnNG~RfeTY 58 (139)
T 2c45_A 44 VTIVDIDNGARLVTY 58 (139)
T ss_dssp EEEEETTTCCEEEEC
T ss_pred EEEEECCCCceEEEE
Confidence 467888888887766
No 383
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=22.80 E-value=2.1e+02 Score=20.26 Aligned_cols=92 Identities=10% Similarity=0.017 Sum_probs=47.1
Q ss_pred EEEE-ECCCCCEEEEE-eC----CCcEEEEeCCCCCeE--Eee-cccc------ceEEEEEccCCCEEEEe---------
Q psy15612 22 FSLG-YCPSGEWLAVG-ME----NSNVEVLHALKPDKY--QLH-LHES------CVLSLRFAACGKWFVST--------- 77 (131)
Q Consensus 22 ~~~~-~~~~~~~l~~~-~~----~~~v~~~~~~~~~~~--~~~-~~~~------~v~~~~~~~~~~~~~~~--------- 77 (131)
..+. ++|+++.++.+ +. ...++++|+.+++.. .+. ..+. ....++|..+...+++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 4455 78998877654 22 335889999988742 122 1111 11344776434333332
Q ss_pred -CCCCeEEEeeCCCCce----EEecCCCCCeEEEEECCCCC
Q psy15612 78 -GKDNLLNAWRTPYGAS----IFQSKESSSVLSCDISADDK 113 (131)
Q Consensus 78 -~~~~~i~~w~~~~~~~----~~~~~~~~~v~~~~~~~~~~ 113 (131)
+....++.|...+... ++.......-.....+++++
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~ 252 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDT 252 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCC
Confidence 1234578887765432 23333333333455566665
No 384
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=22.65 E-value=94 Score=16.88 Aligned_cols=15 Identities=13% Similarity=0.346 Sum_probs=11.0
Q ss_pred CEEEeCCCCceeeee
Q psy15612 1 MYLQSVSPGRQLQQH 15 (131)
Q Consensus 1 i~iwd~~~~~~~~~~ 15 (131)
|.+||+.+|+...++
T Consensus 61 V~IvNvnNG~RfeTY 75 (143)
T 1pqh_A 61 IDIWNVTNGKRFSTY 75 (143)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCceEEEE
Confidence 467888888777665
No 385
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=20.74 E-value=1.1e+02 Score=16.20 Aligned_cols=8 Identities=25% Similarity=0.069 Sum_probs=3.6
Q ss_pred ceEEEEEc
Q psy15612 61 CVLSLRFA 68 (131)
Q Consensus 61 ~v~~~~~~ 68 (131)
.|..+.+.
T Consensus 108 ~V~~V~~~ 115 (138)
T 3c12_A 108 PVDSVTIG 115 (138)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 34444443
No 386
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=20.53 E-value=2.3e+02 Score=19.92 Aligned_cols=54 Identities=7% Similarity=0.029 Sum_probs=33.7
Q ss_pred EEEEEeCCCcEEEE-eCCCCC--eEEe--eccccceEEEEEccCC--CEEEEeCCCCeEEE
Q psy15612 32 WLAVGMENSNVEVL-HALKPD--KYQL--HLHESCVLSLRFAACG--KWFVSTGKDNLLNA 85 (131)
Q Consensus 32 ~l~~~~~~~~v~~~-~~~~~~--~~~~--~~~~~~v~~~~~~~~~--~~~~~~~~~~~i~~ 85 (131)
.+..|..+|.|.-. ...... ...+ .....+|..+.++++. ..++.++..+.+++
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 46678888887544 333222 1222 2234678889999887 88888877765544
No 387
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=20.43 E-value=98 Score=15.60 Aligned_cols=12 Identities=25% Similarity=0.243 Sum_probs=5.2
Q ss_pred EEecCCCcEEEE
Q psy15612 116 VTGSGDKKATVY 127 (131)
Q Consensus 116 ~~~~~d~~i~vw 127 (131)
+.--.||.+.++
T Consensus 93 ~~L~~dGnlvly 104 (113)
T 3mez_B 93 LILQINGQAVVY 104 (113)
T ss_dssp EEECTTSCEEEE
T ss_pred EEEcCCceEEEe
Confidence 333444444444
No 388
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=20.06 E-value=71 Score=16.63 Aligned_cols=15 Identities=7% Similarity=0.049 Sum_probs=10.9
Q ss_pred CEEEeCCCCceeeee
Q psy15612 1 MYLQSVSPGRQLQQH 15 (131)
Q Consensus 1 i~iwd~~~~~~~~~~ 15 (131)
|++.|.+|++.++.+
T Consensus 71 VkVvD~~TgEVIRqI 85 (117)
T 2hc5_A 71 VKVIEDSTNEVIREI 85 (117)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEECCCCcEEEeC
Confidence 467777888877665
Done!