BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15625
(223 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 309 bits (791), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 160/222 (72%), Positives = 165/222 (74%), Gaps = 51/222 (22%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 129 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 188
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 189 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 248
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NKSDLR
Sbjct: 249 LVG---------------------------------------------------NKSDLR 257
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 258 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTG 299
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 162/221 (73%), Positives = 164/221 (74%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAKTFAE+N LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKTFAEKNGLSFIETSALDSTNVETAFQNILT 170
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 305 bits (781), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 162/221 (73%), Positives = 163/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 305 bits (781), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 162/221 (73%), Positives = 163/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 24 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 83
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 84 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 143
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 144 LVGNKSDLR--------------------------------------------------- 152
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 153 HLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILT 193
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/221 (73%), Positives = 163/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/221 (72%), Positives = 163/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 35 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 94
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 95 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 154
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 155 LVGNKSDLR--------------------------------------------------- 163
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+N LSFIETSALDSTNVETAFQNILT
Sbjct: 164 HLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILT 204
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/221 (73%), Positives = 163/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/221 (72%), Positives = 163/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+N LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILT 170
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/221 (71%), Positives = 163/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGT++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+NNLSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILT 170
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 161/221 (72%), Positives = 163/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+VD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 161/221 (72%), Positives = 163/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+VD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 159/222 (71%), Positives = 163/222 (73%), Gaps = 51/222 (22%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGT++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
HLRAVP DEAK FAE+NNLSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTG 171
>gi|195452940|ref|XP_002073567.1| GK14185 [Drosophila willistoni]
gi|194169652|gb|EDW84553.1| GK14185 [Drosophila willistoni]
Length = 214
Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 161/221 (72%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+VD KTI
Sbjct: 1 MGAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/221 (71%), Positives = 163/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGT++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+N+LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKAFAEKNSLSFIETSALDSTNVETAFQNILT 170
>gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans]
Length = 215
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/221 (72%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKNFAERNALSFIETSALDSTNVETAFQNILT 170
>gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca vitripennis]
Length = 215
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/221 (72%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+TFAERN LSFIETSALDSTNVETAF NILT
Sbjct: 130 HLRAVPTDEARTFAERNGLSFIETSALDSTNVETAFHNILT 170
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/223 (71%), Positives = 163/223 (73%), Gaps = 51/223 (22%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+VD KTI
Sbjct: 1 MGAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTAN 223
HLR+VP DEAK FAERN LSFIETSALDSTNVETAFQNILT +
Sbjct: 130 HLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTGD 172
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/221 (72%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+VD KTI
Sbjct: 1 MGAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR+VP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|347972127|ref|XP_001238828.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|347972129|ref|XP_001238827.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|347972131|ref|XP_001238825.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|347972133|ref|XP_313857.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|347972135|ref|XP_003436840.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|347972137|ref|XP_003436841.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|347972139|ref|XP_003436842.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|347972141|ref|XP_003436843.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|347972143|ref|XP_003436844.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|347972145|ref|XP_003436845.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|347972147|ref|XP_003436846.1| AGAP004559-PK [Anopheles gambiae str. PEST]
gi|333469183|gb|EAU76889.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|333469184|gb|EAU76888.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|333469185|gb|EAU76886.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|333469186|gb|EAA44610.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|333469187|gb|EGK97198.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|333469188|gb|EGK97199.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|333469189|gb|EGK97200.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|333469190|gb|EGK97201.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|333469191|gb|EGK97202.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|333469192|gb|EGK97203.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|333469193|gb|EGK97204.1| AGAP004559-PK [Anopheles gambiae str. PEST]
Length = 215
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/221 (72%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+VD KTI
Sbjct: 1 MGNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 163/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE+AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVESAFQQILT 170
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/221 (71%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLES STIGVEFATRSI+VD KTI
Sbjct: 1 MGAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR+VP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 8 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 67
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 68 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 127
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 128 LVGNKSDLR--------------------------------------------------- 136
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 137 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 177
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 61 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 120
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 121 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 180
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 181 LVGNKSDLR--------------------------------------------------- 189
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 190 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 230
>gi|219990677|gb|ACL68712.1| FI09227p [Drosophila melanogaster]
Length = 214
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/221 (71%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+VD KTI
Sbjct: 1 MGAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELR HADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRGHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR+VP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYEN+ERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENIERWLKELRDHADANIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG LR
Sbjct: 121 LVGNKCDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+N LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTDEAKNFAEKNTLSFIETSALDSTNVETAFQNILT 170
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTT 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+N LSFIETSALDSTNVETAFQ ILT
Sbjct: 130 HLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQTILT 170
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 49 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 108
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 109 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 168
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 169 LVGNKSDLR--------------------------------------------------- 177
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 178 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 218
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE +F+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILT 170
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 32 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 91
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 92 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 151
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 152 LVGNKSDLR--------------------------------------------------- 160
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 161 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 201
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE +F+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILT 170
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 157/222 (70%), Positives = 162/222 (72%), Gaps = 51/222 (22%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTG 171
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDY+FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYIFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT+
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSF+ETSALDSTNVETAFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILT 170
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT+
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSF+ETSALDSTNVETAFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILT 170
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGT++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+N LSFIETSALDSTNVE AF NILT
Sbjct: 130 HLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFHNILT 170
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT+
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSF+ETSALDSTNVETAFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILT 170
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIET+ALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETAALDSTNVEEAFKNILT 170
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 46 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 105
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 106 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 165
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 166 LVGNKSDLR--------------------------------------------------- 174
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 175 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 215
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 46 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 105
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 106 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 165
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 166 LVGNKSDLR--------------------------------------------------- 174
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 175 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 215
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR+VP DEA+ FAER++LSFIETSALD TNVETAF NILT
Sbjct: 130 HLRSVPTDEARAFAERHSLSFIETSALDCTNVETAFHNILT 170
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGT++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV+ KTI
Sbjct: 1 MGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVNGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK F+E+N LSFIETSALDSTNVE AFQNILT
Sbjct: 130 HLRAVPTDEAKAFSEKNGLSFIETSALDSTNVEVAFQNILT 170
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD +IVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSDIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGT++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
VG S LR
Sbjct: 121 QVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+N LSFIETSALDSTNVE AFQNILT
Sbjct: 130 HLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFQNILT 170
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLF+VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|349603694|gb|AEP99464.1| Ras-like protein Rab-11B-like protein [Equus caballus]
Length = 275
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYR ITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT SIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILT 170
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Monodelphis
domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILT 170
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILT 170
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNILSFIETSALDSTNVEAAFQQILT 170
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTREDEYDYLFKVVLIGDSGVGKS+LLSRFTRNEFNLESKSTIGVEFATRSI+VD KTI
Sbjct: 1 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHL+YENVERWLRELRDHADQNI+IM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR++P +EAK FAERN LSFIETSALDSTNVE AFQNILT
Sbjct: 130 HLRSIPTEEAKAFAERNGLSFIETSALDSTNVEPAFQNILT 170
>gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus]
Length = 217
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNILSFIETSALDSTNVEVAFQQILT 170
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRG VGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGVVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/221 (69%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV+ KT+
Sbjct: 1 MGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH+TYENVERWL+ELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK +AERN LSFIETSALDSTNVE AF NILT
Sbjct: 130 HLRAVPTDEAKAYAERNQLSFIETSALDSTNVEAAFTNILT 170
>gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
Length = 191
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 19 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 78
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 79 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 138
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 139 LVGNKSDLR--------------------------------------------------- 147
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 148 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 188
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT+
Sbjct: 1 MGNRDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV+RWLRELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG LR
Sbjct: 121 LVGNKCDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+NNLSFIETSALDSTNVETAF NILT
Sbjct: 130 HLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILT 170
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT+
Sbjct: 1 MGNRDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV+RWLRELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG LR
Sbjct: 121 LVGNKCDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+NNLSFIETSALDSTNVETAF NILT
Sbjct: 130 HLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILT 170
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT+
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSF+ETSALDSTNVETAFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILT 170
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/221 (69%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV+ KT+
Sbjct: 1 MGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH+TYENVERWL+ELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK +AE+N LSFIETSALDSTNVE AF NILT
Sbjct: 130 HLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILT 170
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 159/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD K I
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILT 170
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 159/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD IVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNKIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDS NVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSANVEEAFKNILT 170
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MANRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 154/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MANRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 159/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALD TNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILT 170
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 154/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILT 170
>gi|184186123|ref|NP_001116984.1| rab11 GTPase homolog SUrab11p [Strongylocentrotus purpuratus]
Length = 217
Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 159/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGT++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DE+K FAERN LSFIETSALDSTNVE AF ILT
Sbjct: 130 HLRAVPTDESKVFAERNTLSFIETSALDSTNVEQAFVQILT 170
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 154/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R++EYDYLF+VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT+
Sbjct: 1 MGNRDEEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV+RWLRELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG LR
Sbjct: 121 LVGNKCDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+NNLSFIETSALDSTNVETAF NILT
Sbjct: 130 HLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILT 170
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 154/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARVFAEKNTLSFIETSALDSTNVEEAFKNILT 170
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 154/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILT 170
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 154/221 (69%), Positives = 161/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTREDEYDYLFKVVLIGDSGVGKS+LLSRFTRNEFNLESKSTIGVEFATRSI+VD KTI
Sbjct: 1 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHL+YENVERWLRELRDHADQNI+IM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR++P +EAK FAE N LSFIETSALDSTNVE AFQNILT
Sbjct: 130 HLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILT 170
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 154/220 (70%), Positives = 159/220 (72%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G+R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIK
Sbjct: 3 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIK 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIML
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIML 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG S LR H
Sbjct: 123 VGNKSDLR---------------------------------------------------H 131
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 132 LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 171
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 153/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AF+N+LT
Sbjct: 130 HLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNVLT 170
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AF++ILT
Sbjct: 130 HLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKSILT 170
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI V+ KT+
Sbjct: 1 MGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH+TYENVERWL+ELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK +AERN LSFIETSALDSTNVE AF NILT
Sbjct: 130 HLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILT 170
>gi|42543204|pdb|1OIW|A Chain A, X-ray Structure Of The Small G Protein Rab11a In Complex
With Gtpgammas
gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp And Pi
Length = 191
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 159/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 19 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 78
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 79 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 138
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 139 LVGNKSDLR--------------------------------------------------- 147
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 148 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 188
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 159/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE N LSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEGNTLSFIETSALDSTNVEEAFKNILT 170
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI V+ KT+
Sbjct: 1 MGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH+TYENVERWL+ELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK +AERN LSFIETSALDSTNVE AF NILT
Sbjct: 130 HLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILT 170
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/222 (69%), Positives = 162/222 (72%), Gaps = 52/222 (23%)
Query: 1 MGTRE-DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M T++ DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT
Sbjct: 1 MATKDSDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADANIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG S LR
Sbjct: 121 MLVGNKSDLR-------------------------------------------------- 130
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP D++K+FAE+NNLSFIETSALD+TNVE AFQNILT
Sbjct: 131 -HLRAVPTDDSKSFAEKNNLSFIETSALDATNVELAFQNILT 171
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/229 (68%), Positives = 162/229 (70%), Gaps = 59/229 (25%)
Query: 1 MGTREDEYDYLFK--------VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRS 52
MGTR+DEYDYLFK VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRS
Sbjct: 1 MGTRDDEYDYLFKGTAGEAQTVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRS 60
Query: 53 IQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDH 112
IQVD KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDH
Sbjct: 61 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDH 120
Query: 113 ADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 172
AD NIVIMLVG S LR
Sbjct: 121 ADSNIVIMLVGNKSDLR------------------------------------------- 137
Query: 173 VGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 138 --------HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 178
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI V+ KT+
Sbjct: 1 MGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH+TYENVERWL+ELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK +AERN LSFIETSALDSTNVE AF NILT
Sbjct: 130 HLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILT 170
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI V+ KT+
Sbjct: 1 MGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH+TYENVERWL+ELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK +AERN LSFIETSALDSTNVE AF NILT
Sbjct: 130 HLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILT 170
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M T++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MSTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAIT+AYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV +EAK FAERN LSFIETSALDSTNV+ AFQNILT
Sbjct: 130 HLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILT 170
>gi|315229760|gb|ADT91500.1| small monomeric GTPase [Bactrocera dorsalis]
Length = 197
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/217 (71%), Positives = 159/217 (73%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+VD KTIKAQI
Sbjct: 1 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 60
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG
Sbjct: 61 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 120
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLR+
Sbjct: 121 KSDLR---------------------------------------------------HLRS 129
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP DEA+ FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 130 VPTDEARLFAERNGLSFIETSALDSTNVETAFQNILT 166
>gi|427786917|gb|JAA58910.1| Putative ras-related protein rab-11a [Rhipicephalus pulchellus]
Length = 217
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/221 (68%), Positives = 158/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M ++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT+
Sbjct: 1 MANKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+EL+DHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELKDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG + LR
Sbjct: 121 LVGNKNDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+N LSFIETSALDSTNVE AF ILT
Sbjct: 130 HLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILT 170
>gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794172|pdb|2GZD|B Chain B, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794175|pdb|2GZH|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Family
Interacting Protein 2
Length = 173
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 154/221 (69%), Positives = 158/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVI
Sbjct: 61 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIX 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>gi|328717635|ref|XP_003246264.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Acyrthosiphon pisum]
Length = 223
Score = 288 bits (738), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 152/221 (68%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGT ++EYDYLFKVVLIGDSGVGKSNLL+RFTRNEFNLESKSTIGVEFATRSI+V++K I
Sbjct: 1 MGTGDEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKII 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAK LTY+NVERWL ELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVPADEA FAE NNLSFIETSALDSTNVETAF+NILT
Sbjct: 130 HLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILT 170
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/220 (69%), Positives = 159/220 (72%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G+R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI V+ KT+K
Sbjct: 1 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVK 60
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH+TYENVERWL+ELRDHADQNIVIML
Sbjct: 61 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIML 120
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG S LR H
Sbjct: 121 VGNKSDLR---------------------------------------------------H 129
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP DEAK +AERN LSFIETSALDSTNVE AF NILT
Sbjct: 130 LRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILT 169
>gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula]
Length = 217
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/221 (67%), Positives = 159/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M +++DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MSSKDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
VG LR
Sbjct: 121 AVGNKCDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP +EAK ++E+N LSFIETSALDSTNVETAFQNILT
Sbjct: 130 HLRAVPTEEAKAYSEKNGLSFIETSALDSTNVETAFQNILT 170
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/221 (69%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M +++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRS+QVD KTI
Sbjct: 1 MSSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAIT+AYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV +EAK FAERN LSFIETSALDSTNV+ AFQNILT
Sbjct: 130 HLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILT 170
>gi|442750113|gb|JAA67216.1| Putative ras-related protein rab-11a [Ixodes ricinus]
Length = 217
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/221 (67%), Positives = 157/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M ++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT+
Sbjct: 1 MANKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAV ALLVYDIAKHLTYENVERWL+EL+DHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVXALLVYDIAKHLTYENVERWLKELKDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG + LR
Sbjct: 121 LVGNKNDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+N LSFIETSALDSTNVE AF ILT
Sbjct: 130 HLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILT 170
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/221 (68%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGT ++EYDYLFKVVLIGDSGVGKSNLL+RFTRNEFNLESKSTIGVEFATRSI+V++K I
Sbjct: 1 MGTGDEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKII 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAK LTY+NVERWL ELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVPADEA FAE NNLSFIETSALDSTNVETAF+NILT
Sbjct: 130 HLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILT 170
>gi|225708490|gb|ACO10091.1| Ras-related protein Rab-11A [Osmerus mordax]
Length = 216
Score = 286 bits (732), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 150/222 (67%), Positives = 158/222 (71%), Gaps = 51/222 (22%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV+ KT+
Sbjct: 1 MTNREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVESKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYEN ERWL+EL+DHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
HLRAVP DEAK FAE++ LSF+ETSALDS+NVE AFQ ILTA
Sbjct: 130 HLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTA 171
>gi|348527514|ref|XP_003451264.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
Length = 216
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 151/222 (68%), Positives = 158/222 (71%), Gaps = 51/222 (22%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV+ KTI
Sbjct: 1 MTNREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYEN ERWL+EL+DHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
HLRAVP DEAK FAE++ LSF+ETSALDS+NVE AFQ ILTA
Sbjct: 130 HLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTA 171
>gi|355755401|gb|EHH59148.1| GTP-binding protein YPT3, partial [Macaca fascicularis]
Length = 213
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/221 (68%), Positives = 157/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEY VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYXXXXPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|432910562|ref|XP_004078415.1| PREDICTED: ras-related protein Rab-11A-like [Oryzias latipes]
Length = 216
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/222 (67%), Positives = 158/222 (71%), Gaps = 51/222 (22%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV+ KT+
Sbjct: 1 MTNREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYEN ERWL+EL+DHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
HLRAVP DEA+ FAE++ LSF+ETSALDS+NVE AFQ ILTA
Sbjct: 130 HLRAVPTDEARAFAEKHGLSFLETSALDSSNVELAFQTILTA 171
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/221 (67%), Positives = 159/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV+ KT+
Sbjct: 1 MARTEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH+TYE+VERWL+ELRDHAD +IVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHITYEHVERWLKELRDHADHHIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG + LR
Sbjct: 121 LVGNKNDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE+NNL+FIETSALDSTNVE+AFQ ILT
Sbjct: 130 HLRAVPTDEAKAFAEKNNLNFIETSALDSTNVESAFQQILT 170
>gi|339521883|gb|AEJ84106.1| Ras-like protein Rab-11B [Capra hircus]
Length = 218
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/221 (68%), Positives = 157/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIG SGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGGSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAK LTYEN ERWL+ELRDHAD NIVI
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKPLTYENGERWLKELRDHADSNIVIR 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGTKSALR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ F+E+NNLSFI TSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFSEKNNLSFIATSALDSTNVEEAFKNILT 170
>gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 172
Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 151/216 (69%), Positives = 154/216 (71%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 3 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 62
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAG ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG
Sbjct: 63 DTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 122
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 123 SDLR---------------------------------------------------HLRAV 131
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 132 PTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 167
>gi|345309353|ref|XP_001518037.2| PREDICTED: ras-related protein Rab-11A-like [Ornithorhynchus
anatinus]
Length = 376
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 150/209 (71%), Gaps = 51/209 (24%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQER 72
VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQER
Sbjct: 173 PVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 232
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYY 132
YRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG
Sbjct: 233 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG--------- 283
Query: 133 RGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKT 192
NKSDLRHLRAVP DEA+
Sbjct: 284 ------------------------------------------NKSDLRHLRAVPTDEARA 301
Query: 193 FAERNNLSFIETSALDSTNVETAFQNILT 221
FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 302 FAEKNGLSFIETSALDSTNVEAAFQTILT 330
>gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase
Length = 184
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/214 (70%), Positives = 153/214 (71%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDT
Sbjct: 17 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 76
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S
Sbjct: 77 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 136
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
LR HLRAVP
Sbjct: 137 LR---------------------------------------------------HLRAVPT 145
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 146 DEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 179
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/214 (70%), Positives = 154/214 (71%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDT
Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 61
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYR ITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S
Sbjct: 62 AGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 121
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
LR HLRAVP
Sbjct: 122 LR---------------------------------------------------HLRAVPT 130
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 131 DEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 164
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/202 (70%), Positives = 147/202 (72%), Gaps = 51/202 (25%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NKSDLR
Sbjct: 121 LVG---------------------------------------------------NKSDLR 129
Query: 181 HLRAVPADEAKTFAERNNLSFI 202
HLRAVP DEA+ FAE+NNLSFI
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFI 151
>gi|213511282|ref|NP_001134031.1| Ras-related protein Rab-11A [Salmo salar]
gi|209156222|gb|ACI34343.1| Ras-related protein Rab-11A [Salmo salar]
Length = 216
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/222 (66%), Positives = 156/222 (70%), Gaps = 51/222 (22%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI V+ KT+
Sbjct: 1 MTNREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYEN ERWL+EL+DHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
HLRAVP DEAK AE++ LSF+ETSALDS+NVE AFQ ILTA
Sbjct: 130 HLRAVPMDEAKALAEKHGLSFLETSALDSSNVELAFQTILTA 171
>gi|41056251|ref|NP_956417.1| RAB11a, member RAS oncogene family, like [Danio rerio]
gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio]
Length = 216
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/221 (66%), Positives = 156/221 (70%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI V+ KT+
Sbjct: 1 MTGREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYEN ERWL+EL+DHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FAE++ LSF+ETSALDS+NVE AFQ ILT
Sbjct: 130 HLRAVPMDEAKAFAEKHGLSFLETSALDSSNVELAFQTILT 170
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/222 (69%), Positives = 160/222 (72%), Gaps = 53/222 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVI+
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIL 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAV-PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV P EA+ FAER +LSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVCPLTEARAFAER-HLSFIETSALDSTNVEEAFKNILT 170
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/221 (67%), Positives = 160/221 (72%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+V+ KTI
Sbjct: 1 MG-RDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVEGKTI 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAIT+AYYRGAVGALLVYDIAKH TYENVERWL+ELRDHAD NIVIM
Sbjct: 60 KAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHTTYENVERWLKELRDHADNNIVIM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 120 LVGNKSDLR--------------------------------------------------- 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP ++A+ +AER +LSFIETSALDSTNVETAFQNILT
Sbjct: 129 HLRAVPTEDARNYAERQSLSFIETSALDSTNVETAFQNILT 169
>gi|405960755|gb|EKC26640.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 209
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/210 (70%), Positives = 152/210 (72%), Gaps = 51/210 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
F++VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQE
Sbjct: 5 FELVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 65 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLR-- 122
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
HLRAVP DEAK
Sbjct: 123 -------------------------------------------------HLRAVPTDEAK 133
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNILT 221
FAE+NNLSFIETSALDSTNVETAFQNILT
Sbjct: 134 AFAEKNNLSFIETSALDSTNVETAFQNILT 163
>gi|327285863|ref|XP_003227651.1| PREDICTED: ras-related protein Rab-11A-like [Anolis carolinensis]
Length = 236
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 153/239 (64%), Positives = 159/239 (66%), Gaps = 70/239 (29%)
Query: 2 GTREDEYDYLFK-------------------VVLIGDSGVGKSNLLSRFTRNEFNLESKS 42
G+R+DEYDYLFK +VLIGDSGVGKSNLLSRFTRNEFNLESKS
Sbjct: 3 GSRDDEYDYLFKELQGCWVAIPIIPSLQIIKMVLIGDSGVGKSNLLSRFTRNEFNLESKS 62
Query: 43 TIGVEFATRSIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV 102
TIGVEFATRSIQVD KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV
Sbjct: 63 TIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV 122
Query: 103 ERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRD 162
ERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 123 ERWLKELRDHADSNIVIMLVGNKSDLR--------------------------------- 149
Query: 163 HADQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 150 ------------------HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 190
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 153/214 (71%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV+ KT+KAQIWDT
Sbjct: 33 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDT 92
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH+TYE VERWL+ELRDHADQNIVIMLVG S
Sbjct: 93 AGQERYRAITSAYYRGAVGALLVYDIAKHVTYEAVERWLKELRDHADQNIVIMLVGNKSD 152
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
LR HLRAVP
Sbjct: 153 LR---------------------------------------------------HLRAVPT 161
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAK +AE+N LSFIETSALDSTNVE AF NILT
Sbjct: 162 DEAKAYAEKNQLSFIETSALDSTNVEAAFTNILT 195
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKAFASENNLSFIETSALDASNVELAFQNILT 168
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P DEAK FA N+LSFIETSALD++NVE AFQNILT
Sbjct: 133 PTDEAKAFASENHLSFIETSALDASNVELAFQNILT 168
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
Length = 211
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/219 (66%), Positives = 157/219 (71%), Gaps = 51/219 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
+++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKA
Sbjct: 2 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA 61
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH+T+ENV+RWL+ELRDHAD NIVIMLV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTFENVDRWLKELRDHADHNIVIMLV 121
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G S LR HL
Sbjct: 122 GNKSDLR---------------------------------------------------HL 130
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAV D+A+ +AE+ NLSFIETSALDSTNVE AFQ ILT
Sbjct: 131 RAVATDDARGYAEQRNLSFIETSALDSTNVEQAFQTILT 169
>gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
Length = 167
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/215 (69%), Positives = 152/215 (70%), Gaps = 51/215 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWD
Sbjct: 1 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 60
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAG ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVI LVG S
Sbjct: 61 TAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNKS 120
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
LR HLRAVP
Sbjct: 121 DLR---------------------------------------------------HLRAVP 129
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 164
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|340380586|ref|XP_003388803.1| PREDICTED: ras-related protein Rab-11B-like [Amphimedon
queenslandica]
Length = 219
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/221 (64%), Positives = 157/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M ++E+EYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+VD K +
Sbjct: 1 MTSKEEEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVDGKVV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDIAKH+TYENVERWL+EL+DHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDIAKHMTYENVERWLKELKDHADTNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
L G LR
Sbjct: 121 LAGNKCDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV +EAK FAE+++LSFIETSALDSTNVE AFQNILT
Sbjct: 130 HLRAVSTEEAKKFAEQHSLSFIETSALDSTNVEAAFQNILT 170
>gi|332028148|gb|EGI68199.1| Ras-related protein Rab-11B [Acromyrmex echinatior]
Length = 219
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/214 (70%), Positives = 151/214 (70%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
Y + VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDT
Sbjct: 12 YTRMNPFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 71
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG S
Sbjct: 72 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 131
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
LR HLRAVP
Sbjct: 132 LR---------------------------------------------------HLRAVPT 140
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 141 DEAKAFAERNGLSFIETSALDSTNVETAFQNILT 174
>gi|387017948|gb|AFJ51092.1| RAB11a, member RAS oncogene family, like [Crotalus adamanteus]
Length = 217
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/221 (66%), Positives = 156/221 (70%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M ++DEYDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIQVD KT+
Sbjct: 1 MRGKDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDNKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAK+LTYEN E WL+EL+DHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAECWLKELQDHADANIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK+FAE+N LSFIE SALDSTNVE AF NILT
Sbjct: 130 HLRAVPTDEAKSFAEKNGLSFIEASALDSTNVEAAFHNILT 170
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/214 (67%), Positives = 152/214 (71%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH TYENV RWL+ELRDHADQNIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYENVTRWLKELRDHADQNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAK F+ NNLSFIETSALD++NVE+AFQNILT
Sbjct: 136 DEAKAFSTENNLSFIETSALDASNVESAFQNILT 169
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P DEAK FA N+LSFIETSALD++NVE AFQNILT
Sbjct: 133 PTDEAKGFASENHLSFIETSALDASNVELAFQNILT 168
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|410927430|ref|XP_003977150.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/220 (66%), Positives = 156/220 (70%), Gaps = 51/220 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
+REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+V+ KT+KA
Sbjct: 2 SREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEGKTVKA 61
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYEN ERWL+EL+DHAD NIVIMLV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLV 121
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G S LR HL
Sbjct: 122 GNKSDLR---------------------------------------------------HL 130
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
RAVP DEA+ FAE+ LSF+ETSALDS+NVE AF ILTA
Sbjct: 131 RAVPIDEARAFAEKYGLSFLETSALDSSNVELAFHTILTA 170
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 154/216 (71%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK+FA N+LSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKSFASENHLSFIETSALDASNVELAFQNILT 168
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIK+QIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYD++KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 154/216 (71%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK+FA N+LSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKSFASENHLSFIETSALDASNVELAFQNILT 168
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 154/216 (71%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK+FA N+LSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKSFASENHLSFIETSALDASNVELAFQNILT 168
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 144/220 (65%), Positives = 156/220 (70%), Gaps = 51/220 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
+ E+EYD+LFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+VD KTIKA
Sbjct: 2 SSEEEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKA 61
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH +YENV RWL+ELRDHAD NIVIMLV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADSNIVIMLV 121
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G S L +HL
Sbjct: 122 GNKSDL---------------------------------------------------KHL 130
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
RAVP +EA FAE N+LSFIETSALDSTNVE AF+NILT+
Sbjct: 131 RAVPKEEATKFAEENSLSFIETSALDSTNVEEAFKNILTS 170
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIK+QIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASDNNLSFIETSALDASNVELAFQNILT 168
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIK+QIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYD++KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 145/218 (66%), Positives = 154/218 (70%), Gaps = 51/218 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
R++EYDYLFKVVLIGDSGVGK+NLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK IKAQ
Sbjct: 3 RDEEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKMIKAQ 62
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAITSAYYRGAVGALLVYDI+KH TYE+VERWL+ELRDHAD NIVIMLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHSTYESVERWLKELRDHADSNIVIMLVG 122
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S LR HLR
Sbjct: 123 NKSDLR---------------------------------------------------HLR 131
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
AVP DEAK FA N LSFIETSALD+TNV+ +FQ ILT
Sbjct: 132 AVPTDEAKQFASDNGLSFIETSALDATNVDQSFQQILT 169
>gi|440902572|gb|ELR53352.1| Ras-related protein Rab-11A, partial [Bos grunniens mutus]
Length = 258
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 148/221 (66%), Positives = 153/221 (69%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
+GTR L +VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 43 IGTRGHPLQSLIEVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 102
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 103 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 162
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 163 LVGNKSDLR--------------------------------------------------- 171
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 172 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 212
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA N+LSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKAFASENHLSFIETSALDASNVELAFQNILT 168
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TY+NV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 155/216 (71%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+K +T+ENV RWL+ELRDHADQNIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P ++AK FAE N+LSFIETSALD+TNVE AFQNILT
Sbjct: 133 PTEDAKKFAEENHLSFIETSALDATNVELAFQNILT 168
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 155/216 (71%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+K +T+ENV RWL+ELRDHADQNIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P ++AK FAE N+LSFIETSALD+TNVE AFQNILT
Sbjct: 133 PTEDAKKFAEENHLSFIETSALDATNVELAFQNILT 168
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TY+NV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|338717415|ref|XP_001496560.3| PREDICTED: ras-related protein Rab-11A-like [Equus caballus]
Length = 346
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 150/212 (70%), Gaps = 51/212 (24%)
Query: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
+ FK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAG
Sbjct: 140 HFFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 199
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLR 129
QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 200 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 259
Query: 130 RYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADE 189
HLRAVP DE
Sbjct: 260 ---------------------------------------------------HLRAVPTDE 268
Query: 190 AKTFAERNNLSFIETSALDSTNVETAFQNILT 221
A+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 269 ARAFAEKNGLSFIETSALDSTNVEAAFQTILT 300
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA N+LSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKAFASENHLSFIETSALDASNVELAFQNILT 168
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA N+LSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKAFASENHLSFIETSALDASNVELAFQNILT 168
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 210
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 152/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSG GKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TY+NV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA N+LSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKAFASENHLSFIETSALDASNVELAFQNILT 168
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TY+NV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVTRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P ++AK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEDAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 152/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA N LSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASDNGLSFIETSALDASNVELAFQNILT 168
>gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana]
Length = 204
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/206 (71%), Positives = 148/206 (71%), Gaps = 51/206 (24%)
Query: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYRA 75
LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQERYRA
Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 63
Query: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGA 135
ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG S LR
Sbjct: 64 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR------ 117
Query: 136 VGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFAE 195
HLRAVP DEAK FAE
Sbjct: 118 ---------------------------------------------HLRAVPTDEAKAFAE 132
Query: 196 RNNLSFIETSALDSTNVETAFQNILT 221
RN LSFIETSALDSTNVETAFQNILT
Sbjct: 133 RNGLSFIETSALDSTNVETAFQNILT 158
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 154/216 (71%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+K++TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKNITYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P D+AK FA N+LSFIETSALD+TNVE AFQNILT
Sbjct: 133 PTDDAKNFAAENHLSFIETSALDATNVELAFQNILT 168
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL++KSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TY+NV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 152/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA N+LSFIETSA D++NVE AFQNILT
Sbjct: 133 PTEEAKAFASENHLSFIETSAFDASNVELAFQNILT 168
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E YDYLFKVVLIGDSG GKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD KT+KAQI
Sbjct: 222 ESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQI 281
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIVIMLVG
Sbjct: 282 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGN 341
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLRA
Sbjct: 342 KSDLR---------------------------------------------------HLRA 350
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP DEAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 351 VPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILT 387
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/207 (71%), Positives = 149/207 (71%), Gaps = 51/207 (24%)
Query: 15 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYR 74
VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+VD KTIKAQIWDTAGQERYR
Sbjct: 89 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYR 148
Query: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRG 134
AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG S LR
Sbjct: 149 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR----- 203
Query: 135 AVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFA 194
HLR+VP DEAK FA
Sbjct: 204 ----------------------------------------------HLRSVPTDEAKLFA 217
Query: 195 ERNNLSFIETSALDSTNVETAFQNILT 221
ERN LSFIETSALDSTNVETAFQNILT
Sbjct: 218 ERNGLSFIETSALDSTNVETAFQNILT 244
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/209 (69%), Positives = 150/209 (71%), Gaps = 51/209 (24%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQER 72
KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQER
Sbjct: 1 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 60
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYY 132
YRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 61 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR--- 117
Query: 133 RGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKT 192
HLRAVP DEA+
Sbjct: 118 ------------------------------------------------HLRAVPTDEARA 129
Query: 193 FAERNNLSFIETSALDSTNVETAFQNILT 221
FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 FAEKNNLSFIETSALDSTNVEEAFKNILT 158
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 149/214 (69%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIVIMLVG
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHSTYTNVTRWLKELRDHADSNIVIMLVG---- 122
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
NKSDL+HLRAVP
Sbjct: 123 -----------------------------------------------NKSDLKHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAK F+ N LSFIETSALD NVE AFQNILT
Sbjct: 136 DEAKAFSADNGLSFIETSALDGGNVEAAFQNILT 169
>gi|395502702|ref|XP_003755716.1| PREDICTED: ras-related protein Rab-11A [Sarcophilus harrisii]
Length = 284
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/214 (67%), Positives = 151/214 (70%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
+ ++F VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDT
Sbjct: 76 FCFVFSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 135
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S
Sbjct: 136 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 195
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
LR HLRAVP
Sbjct: 196 LR---------------------------------------------------HLRAVPT 204
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 205 DEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 238
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis domestica]
Length = 218
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 150/211 (71%), Gaps = 51/211 (24%)
Query: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQ 70
+ K VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQ
Sbjct: 11 ICKFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRR 130
ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLR- 129
Query: 131 YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEA 190
HLRAVP DEA
Sbjct: 130 --------------------------------------------------HLRAVPTDEA 139
Query: 191 KTFAERNNLSFIETSALDSTNVETAFQNILT 221
+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 152/217 (70%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSIQVD KTIKAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI KH+TYENVERWL+ELRDHAD NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S L+ HLR
Sbjct: 126 KSDLK---------------------------------------------------HLRG 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP D+A+ F+E+ LSFIETSAL+STNVE AFQ ILT
Sbjct: 135 VPTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILT 171
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 144/219 (65%), Positives = 154/219 (70%), Gaps = 51/219 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
+R+DEYDYLFKVVLIGDSGVGK+NLLSRFTRNEFNLESKSTIGVEFATRS+QVD KT+KA
Sbjct: 2 SRDDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKA 61
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGALLVYDIAK+ TYENV RWL+ELRDHAD NIV+MLV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLV 121
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G S LR HL
Sbjct: 122 GNKSDLR---------------------------------------------------HL 130
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP +EAK FA N LSFIETSALDS+NVE AFQ ILT
Sbjct: 131 RAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILT 169
>gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries]
Length = 208
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 150/213 (70%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S L
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 120
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
R + RAVP D
Sbjct: 121 RHF---------------------------------------------------RAVPTD 129
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
EA+ FAE+N LSFIET ALDSTNVE AFQ ILT
Sbjct: 130 EARAFAEKNGLSFIETFALDSTNVEAAFQTILT 162
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 153/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFN++SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH+TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHITYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAK FA N+LSFIETSALD++NVE AFQNILT
Sbjct: 133 TTDEAKAFAAENHLSFIETSALDASNVELAFQNILT 168
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 152/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADNNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA +N LSFIETSALD++NVE AFQN LT
Sbjct: 133 PTEEAKEFASQNGLSFIETSALDASNVELAFQNELT 168
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 152/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVIRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA N+LSFIETSA D++NVE AFQNILT
Sbjct: 133 PTEEAKAFASENHLSFIETSAFDASNVELAFQNILT 168
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/217 (64%), Positives = 154/217 (70%), Gaps = 51/217 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQ+D KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDNKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+K L++ENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVG-- 121
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK+D RHLRAV
Sbjct: 122 -------------------------------------------------NKTDQRHLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
P ++ K FA N LSFIETSAL++TNV+ AFQNILT+
Sbjct: 133 PTEDGKNFASENGLSFIETSALEATNVDLAFQNILTS 169
>gi|339252040|ref|XP_003371243.1| GTP-binding protein Ypt3 [Trichinella spiralis]
gi|316968547|gb|EFV52812.1| GTP-binding protein Ypt3 [Trichinella spiralis]
Length = 330
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/259 (58%), Positives = 160/259 (61%), Gaps = 89/259 (34%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M T++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESK+TIGVEFATRSIQVD KTI
Sbjct: 27 MVTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKTTIGVEFATRSIQVDGKTI 86
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAK------------------------- 95
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAK
Sbjct: 87 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKCAFFACFLNTSARLIQKLIQLVSLV 146
Query: 96 -------------HLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVY 142
H+TYENVERWL+ELRDHADQNIVIMLVG S LR
Sbjct: 147 SLKGICQGYLITPHVTYENVERWLKELRDHADQNIVIMLVGNKSDLR------------- 193
Query: 143 DIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFI 202
HLRAVP+DEAK + E+N LSFI
Sbjct: 194 --------------------------------------HLRAVPSDEAKAYTEQNCLSFI 215
Query: 203 ETSALDSTNVETAFQNILT 221
ETSALDSTNVE AF NILT
Sbjct: 216 ETSALDSTNVEAAFTNILT 234
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 152/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+K TY+NV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKRQTYDNVTRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 168
>gi|302691568|ref|XP_003035463.1| GTPase [Schizophyllum commune H4-8]
gi|300109159|gb|EFJ00561.1| GTPase [Schizophyllum commune H4-8]
Length = 210
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 150/214 (70%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDGKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAK+FA NNLSFIETSALD++NVE+AFQ ILT
Sbjct: 136 DEAKSFAAENNLSFIETSALDASNVESAFQTILT 169
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/219 (65%), Positives = 154/219 (70%), Gaps = 51/219 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
+R+DEYDYLFKVVLIGDSGVGK+NLLSRFTRNEFNLESKSTIGVEFATRS+QVD KT+K+
Sbjct: 2 SRDDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKS 61
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGALLVYDIAK+ TYENV RWL+ELRDHAD NIV+MLV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLV 121
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G S LR HL
Sbjct: 122 GNKSDLR---------------------------------------------------HL 130
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP +EAK FA N LSFIETSALDS+NVE AFQ ILT
Sbjct: 131 RAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILT 169
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/217 (64%), Positives = 154/217 (70%), Gaps = 51/217 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQ+D KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+K L++ENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVG-- 121
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK+D RHLRAV
Sbjct: 122 -------------------------------------------------NKTDQRHLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
P ++ K FA N LSFIETSAL++TNV+ AFQNILT+
Sbjct: 133 PTEDGKNFASENGLSFIETSALEATNVDLAFQNILTS 169
>gi|281347336|gb|EFB22920.1| hypothetical protein PANDA_002189 [Ailuropoda melanoleuca]
Length = 205
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 148/210 (70%), Gaps = 51/210 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
F VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQE
Sbjct: 1 FSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 60
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 61 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR-- 118
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
HLRAVP DEA+
Sbjct: 119 -------------------------------------------------HLRAVPTDEAR 129
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNILT 221
FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 AFAEKNGLSFIETSALDSTNVEAAFQTILT 159
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E YDYLFKVVLIGDSG GKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD KT+KAQI
Sbjct: 4 ESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQI 63
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGN 123
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLRA
Sbjct: 124 KSDLR---------------------------------------------------HLRA 132
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP DEAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 VPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILT 169
>gi|417408648|gb|JAA50866.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 205
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 149/208 (71%), Gaps = 51/208 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR---- 116
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLRAVP DEA+ F
Sbjct: 117 -----------------------------------------------HLRAVPTDEARAF 129
Query: 194 AERNNLSFIETSALDSTNVETAFQNILT 221
AE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 AEKNNLSFIETSALDSTNVEEAFKNILT 157
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 151/216 (69%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHNTYENVTRWLKELRDHADTNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA N LSFIETSALD++NVE AFQN LT
Sbjct: 133 PTEEAKQFASENGLSFIETSALDASNVELAFQNELT 168
>gi|417408504|gb|JAA50801.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 190
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 149/208 (71%), Gaps = 51/208 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR---- 116
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLRAVP DEA+ F
Sbjct: 117 -----------------------------------------------HLRAVPTDEARAF 129
Query: 194 AERNNLSFIETSALDSTNVETAFQNILT 221
AE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 AEKNNLSFIETSALDSTNVEEAFKNILT 157
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 149/214 (69%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADTNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAKTFA N LSFIETSALD++NVE+AFQ ILT
Sbjct: 136 DEAKTFASENGLSFIETSALDASNVESAFQTILT 169
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 152/217 (70%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSIQVD KTIKAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI KH+TYENVERWL+ELRDHAD NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLR
Sbjct: 126 KSDLR---------------------------------------------------HLRG 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+A++FAE+ LSFIETSAL+STNVE AFQ ILT
Sbjct: 135 VSLDDAQSFAEKEGLSFIETSALESTNVEKAFQRILT 171
>gi|291411545|ref|XP_002722062.1| PREDICTED: RAB11B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 234
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/209 (69%), Positives = 149/209 (71%), Gaps = 51/209 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQERY
Sbjct: 57 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 116
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 117 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR---- 172
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLRAVP DEA+ F
Sbjct: 173 -----------------------------------------------HLRAVPTDEARAF 185
Query: 194 AERNNLSFIETSALDSTNVETAFQNILTA 222
AE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 186 AEKNNLSFIETSALDSTNVEEAFKNILTG 214
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 152/216 (70%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+K +TY+NV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKQITYDNVTRWLKELRDHADNNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P ++AK FA N+LSFIETSALDSTNVE AFQ ILT
Sbjct: 133 PTEDAKNFAAENHLSFIETSALDSTNVELAFQTILT 168
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/217 (64%), Positives = 155/217 (71%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+IQVD KTIKAQI
Sbjct: 6 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K+ T++NV+RWLRELRDHAD NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL H+RA
Sbjct: 125 --------------------------------------------------NKSDLSHMRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP D+A+ FAE+ LSF+ETSAL+STNVE +FQ+ILT
Sbjct: 135 VPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILT 171
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/217 (64%), Positives = 155/217 (71%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+IQVD KTIKAQI
Sbjct: 6 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K+ T++NV+RWLRELRDHAD NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL H+RA
Sbjct: 125 --------------------------------------------------NKSDLSHMRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP D+A+ FAE+ LSF+ETSAL+STNVE +FQ+ILT
Sbjct: 135 VPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILT 171
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 147/208 (70%), Gaps = 51/208 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQERY
Sbjct: 56 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 115
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 116 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR---- 171
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLRAVP DEA+ F
Sbjct: 172 -----------------------------------------------HLRAVPTDEARAF 184
Query: 194 AERNNLSFIETSALDSTNVETAFQNILT 221
AE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 185 AEKNGLSFIETSALDSTNVEAAFQTILT 212
>gi|440804360|gb|ELR25237.1| RAB11B protein, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 153/219 (69%), Gaps = 51/219 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
+++DEYDYLFKVVLIGDSGVGKSNLLSRFTRN+FNLESKSTIGVEFATRSI+ D KTIKA
Sbjct: 2 SKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATRSIKCDSKTIKA 61
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGALLVYDI+K +TYENVERWL ELRDHAD NIVIMLV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKAVTYENVERWLNELRDHADSNIVIMLV 121
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G S LR HL
Sbjct: 122 GNKSDLR---------------------------------------------------HL 130
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP ++A AE++ LSFIETSALDSTNVE AFQ ILT
Sbjct: 131 RAVPTEQAAALAEKHGLSFIETSALDSTNVELAFQKILT 169
>gi|167537606|ref|XP_001750471.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771011|gb|EDQ84685.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 141/217 (64%), Positives = 154/217 (70%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYD+LFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+V+ KTIKAQI
Sbjct: 4 DDEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVENKTIKAQI 63
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 123
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S L +HLRA
Sbjct: 124 KSDL---------------------------------------------------KHLRA 132
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP +EA+ FAE N+LSFIETSAL++ NV+ AF ILT
Sbjct: 133 VPTEEAQKFAEENDLSFIETSALEAENVDDAFTTILT 169
>gi|355714809|gb|AES05124.1| RAB11B, member RAS oncoprotein family [Mustela putorius furo]
Length = 204
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 148/207 (71%), Gaps = 51/207 (24%)
Query: 15 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYR 74
VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 60
Query: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRG 134
AITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 61 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR----- 115
Query: 135 AVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFA 194
HLRAVP DEA+ FA
Sbjct: 116 ----------------------------------------------HLRAVPTDEARAFA 129
Query: 195 ERNNLSFIETSALDSTNVETAFQNILT 221
E+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 EKNNLSFIETSALDSTNVEEAFKNILT 156
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 144/219 (65%), Positives = 150/219 (68%), Gaps = 51/219 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KT+KA
Sbjct: 2 TDGSNYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKA 61
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH TYENV RWL+ELRDHAD NIVIMLV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLV 121
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G S L +HL
Sbjct: 122 GNKSDL---------------------------------------------------KHL 130
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAV DEAK FA N LSFIETSALD++NVE+AFQNILT
Sbjct: 131 RAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILT 169
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 149/214 (69%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH TYENV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAV
Sbjct: 127 L---------------------------------------------------KHLRAVST 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAK FA N LSFIETSALD++NVE+AFQNILT
Sbjct: 136 DEAKQFATENGLSFIETSALDASNVESAFQNILT 169
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 152/217 (70%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSIQVD KTIKAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI KH+TYENVERWL+ELRDHAD NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S L+ HLR
Sbjct: 126 KSDLK---------------------------------------------------HLRG 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+A++F+E+ LSFIETSAL+STNVE AFQ ILT
Sbjct: 135 VSTDDAQSFSEKEGLSFIETSALESTNVEKAFQRILT 171
>gi|444721666|gb|ELW62390.1| Ras-related protein Rab-11A [Tupaia chinensis]
Length = 236
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 147/208 (70%), Gaps = 51/208 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQERY
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 66
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 67 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR---- 122
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLRAVP DEA+ F
Sbjct: 123 -----------------------------------------------HLRAVPTDEARAF 135
Query: 194 AERNNLSFIETSALDSTNVETAFQNILT 221
AE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 136 AEKNGLSFIETSALDSTNVEAAFQTILT 163
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E YDYLFKVVLIGDSG GKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD KT+KAQI
Sbjct: 4 ESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQI 63
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGN 123
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLRA
Sbjct: 124 KSDLR---------------------------------------------------HLRA 132
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 VPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILT 169
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 140/215 (65%), Positives = 151/215 (70%), Gaps = 51/215 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
YD+LFKVVLIGDSGVGKSNLLSRFTRNEFN++SKSTIGVEFATRSI VD KTIKAQIWD
Sbjct: 6 SYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKTIKAQIWD 65
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYDI+KH TY NV+RWL+ELRDHAD NIVIMLVG S
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVIMLVGNKS 125
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
LR HLRAVP
Sbjct: 126 DLR---------------------------------------------------HLRAVP 134
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+EA+ FA NNLSFIETSA+D++NVETAFQNILT
Sbjct: 135 TEEAQAFATENNLSFIETSAMDASNVETAFQNILT 169
>gi|449266278|gb|EMC77353.1| Ras-related protein Rab-11A, partial [Columba livia]
Length = 203
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 147/208 (70%), Gaps = 51/208 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR---- 116
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLRAVP DEA+ F
Sbjct: 117 -----------------------------------------------HLRAVPTDEARAF 129
Query: 194 AERNNLSFIETSALDSTNVETAFQNILT 221
AE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 AEKNGLSFIETSALDSTNVEAAFQTILT 157
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 151/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSIQVD KTIKAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI KH+TYENVERWL+ELRDHAD NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S L+ HLR
Sbjct: 126 KSDLK---------------------------------------------------HLRG 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+A+ F+E+ LSFIETSAL+STNVE AFQ ILT
Sbjct: 135 VSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILT 171
>gi|334314719|ref|XP_003340079.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Monodelphis
domestica]
Length = 205
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 147/208 (70%), Gaps = 51/208 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQERY
Sbjct: 3 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 62
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 63 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR---- 118
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLRAVP DEA+ F
Sbjct: 119 -----------------------------------------------HLRAVPTDEARAF 131
Query: 194 AERNNLSFIETSALDSTNVETAFQNILT 221
AE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 132 AEKNGLSFIETSALDSTNVEAAFQTILT 159
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 151/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSIQVD KTIKAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI KH+TYENVERWL+ELRDHAD NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S L+ HLR
Sbjct: 126 KSDLK---------------------------------------------------HLRG 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+A+ F+E+ LSFIETSAL+STNVE AFQ ILT
Sbjct: 135 VSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILT 171
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 148/214 (69%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAK FA N LSFIETSALD++NVE+AFQ ILT
Sbjct: 136 DEAKAFATENGLSFIETSALDASNVESAFQTILT 169
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 151/218 (69%), Gaps = 53/218 (24%)
Query: 6 DEYD--YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
DEYD Y+ VVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIK+Q
Sbjct: 4 DEYDVSYVVAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQ 63
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAITSAYYRGAVGALLVYD++KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVG 123
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S LR HLR
Sbjct: 124 NKSDLR---------------------------------------------------HLR 132
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
AVP DEAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 AVPTDEAKQFASENNLSFIETSALDASNVELAFQNILT 170
>gi|326926865|ref|XP_003209617.1| PREDICTED: ras-related protein Rab-11A-like [Meleagris gallopavo]
Length = 217
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 147/208 (70%), Gaps = 51/208 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQERY
Sbjct: 15 LVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 74
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 75 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR---- 130
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLRAVP DEA+ F
Sbjct: 131 -----------------------------------------------HLRAVPTDEARAF 143
Query: 194 AERNNLSFIETSALDSTNVETAFQNILT 221
AE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 144 AEKNGLSFIETSALDSTNVEAAFQTILT 171
>gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
Length = 224
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 145/230 (63%), Positives = 153/230 (66%), Gaps = 65/230 (28%)
Query: 6 DEYDYLFK--------------VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATR 51
DEYD+LFK +VLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATR
Sbjct: 4 DEYDFLFKGNVATFPAQSPQVSLVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATR 63
Query: 52 SIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRD 111
SIQVD KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH TY+NV RWL+ELRD
Sbjct: 64 SIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRD 123
Query: 112 HADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 171
HAD NIVIMLVG S LR
Sbjct: 124 HADSNIVIMLVGNKSDLR------------------------------------------ 141
Query: 172 LVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 142 ---------HLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILT 182
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 213
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 149/214 (69%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+EAKTF+ N LSFIETSALD++NVE+AFQ ILT
Sbjct: 136 EEAKTFSTENGLSFIETSALDASNVESAFQTILT 169
>gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
gi|40746597|gb|EAA65753.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
Length = 237
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/224 (64%), Positives = 152/224 (67%), Gaps = 58/224 (25%)
Query: 6 DEYD-------YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK 58
DEYD +LFKVVLIGDSG GKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD K
Sbjct: 4 DEYDVSPRPLTFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSK 63
Query: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH TY+NV RWL+ELRDHAD NIV
Sbjct: 64 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIV 123
Query: 119 IMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
IMLVG S LR
Sbjct: 124 IMLVGNKSDLR------------------------------------------------- 134
Query: 179 LRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
HLRAVP +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 135 --HLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTG 176
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/218 (64%), Positives = 151/218 (69%), Gaps = 51/218 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
REDEYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+SI + KTIKAQ
Sbjct: 5 REDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQ 64
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAITSAYYRGAVGALLVYDI KH T+ENVERWL+ELRDHAD N VIMLVG
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVG 124
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S LR HLR
Sbjct: 125 NKSDLR---------------------------------------------------HLR 133
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
AV +EA FAE+NNL+FIETSAL++T V+TAFQ ILT
Sbjct: 134 AVSTEEAMAFAEKNNLAFIETSALEATGVDTAFQRILT 171
>gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 147/208 (70%), Gaps = 51/208 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLR---- 116
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLRAVP DEA+ F
Sbjct: 117 -----------------------------------------------HLRAVPTDEARAF 129
Query: 194 AERNNLSFIETSALDSTNVETAFQNILT 221
AE+N LSFIETSALDST VE AF+NILT
Sbjct: 130 AEKNTLSFIETSALDSTKVEEAFKNILT 157
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 149/214 (69%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATR+I VD KT+KAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTINVDGKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYANVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+EAKTFA N LSFIETSALD++NVE+AFQ ILT
Sbjct: 136 EEAKTFATENELSFIETSALDASNVESAFQTILT 169
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis subvermispora
B]
Length = 212
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 148/214 (69%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
+DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAK FA N LSFIETSALD++NVE+AFQ ILT
Sbjct: 136 DEAKAFAAENALSFIETSALDASNVESAFQTILT 169
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 141/217 (64%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E YDYLFKVVLIGDSG GKSNLLSRFTRNEF+L+S+STIGVEFATRSI VD KTIKAQI
Sbjct: 4 ESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKTIKAQI 63
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIV+MLVG
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHSTYVNVSRWLKELRDHADSNIVVMLVGN 123
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLRA
Sbjct: 124 KSDLR---------------------------------------------------HLRA 132
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 VPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILT 169
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 147/214 (68%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAK F+ N LSFIETSALD++NVE AFQ ILT
Sbjct: 136 DEAKAFSTENGLSFIETSALDASNVEAAFQTILT 169
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 148/214 (69%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH TYENV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHSTYENVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAV
Sbjct: 127 L---------------------------------------------------KHLRAVST 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+EAK FA LSFIETSALD++NVE+AFQNILT
Sbjct: 136 EEAKAFATEQGLSFIETSALDASNVESAFQNILT 169
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 152/221 (68%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG +++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFN+ESKSTIGVEFAT+SIQ + K I
Sbjct: 55 MGAKDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENKII 114
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI KH T+EN ERWL+ELRDHA+ NIV+M
Sbjct: 115 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHAESNIVVM 174
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG LR
Sbjct: 175 LVGNKCDLR--------------------------------------------------- 183
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR V +EAK FAE+N+L+FIETSALDS+ V+TAFQ ILT
Sbjct: 184 HLRTVSVEEAKEFAEKNSLAFIETSALDSSGVDTAFQQILT 224
>gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
Length = 230
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 146/235 (62%), Positives = 153/235 (65%), Gaps = 70/235 (29%)
Query: 6 DEYDYLFK-------------------VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGV 46
DEYD+LFK VVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGV
Sbjct: 4 DEYDFLFKGNVATFPAQSPQLFIPFRYVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGV 63
Query: 47 EFATRSIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL 106
EFATRSIQVD KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH TY+NV RWL
Sbjct: 64 EFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWL 123
Query: 107 RELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQ 166
+ELRDHAD NIVIMLVG S LR
Sbjct: 124 KELRDHADSNIVIMLVGNKSDLR------------------------------------- 146
Query: 167 NIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 147 --------------HLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILT 187
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 151/218 (69%), Gaps = 51/218 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
REDEYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+SI + KTIKAQ
Sbjct: 5 REDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQ 64
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAITSAYYRGAVGALLVYDI KH T+ENVERWL+ELRDHAD N VIMLVG
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVG 124
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S LR HLR
Sbjct: 125 NKSDLR---------------------------------------------------HLR 133
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
AV +EA FAE+NNL+FIETSAL++T V++AFQ ILT
Sbjct: 134 AVSTEEAMAFAEKNNLAFIETSALEATGVDSAFQRILT 171
>gi|408399192|gb|EKJ78316.1| hypothetical protein FPSE_01502 [Fusarium pseudograminearum CS3096]
Length = 212
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 150/216 (69%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD VVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDREPTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK+FA N+LSFIETSALD++NVE AFQNILT
Sbjct: 133 PTEEAKSFASENHLSFIETSALDASNVELAFQNILT 168
>gi|409046556|gb|EKM56036.1| hypothetical protein PHACADRAFT_257063 [Phanerochaete carnosa
HHB-10118-sp]
Length = 212
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/217 (63%), Positives = 150/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+ +D+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRS+ +D KT+KAQI
Sbjct: 4 QSNFDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLAIDGKTVKAQI 63
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI+KH TY NV RWL+ELRDHADQNIVIMLVG
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYSNVTRWLKELRDHADQNIVIMLVGN 123
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S L +HLRA
Sbjct: 124 KSDL---------------------------------------------------KHLRA 132
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP DEAK F+ N LSFIETSALD++NVE+AFQ ILT
Sbjct: 133 VPTDEAKAFSSENGLSFIETSALDASNVESAFQTILT 169
>gi|328860505|gb|EGG09611.1| hypothetical protein MELLADRAFT_115734 [Melampsora larici-populina
98AG31]
Length = 214
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 150/214 (70%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YD+LFKVVLIGDSGVGKSNLLSRFTRNEFN+ESKSTIGVEFATRSI VD KTIKAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATRSIVVDSKTIKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDI+K +Y +V+RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKQQSYTHVQRWLKELRDHADSNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
LR HLRAVP
Sbjct: 127 LR---------------------------------------------------HLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+EAK FA NNLSFIETSA+D++NVE+AFQNILT
Sbjct: 136 EEAKAFAAENNLSFIETSAMDASNVESAFQNILT 169
>gi|340515772|gb|EGR46024.1| Ras-GTPase [Trichoderma reesei QM6a]
Length = 209
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 149/216 (68%), Gaps = 54/216 (25%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD VVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDV---VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 60
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 61 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNK 120
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 121 SDLR---------------------------------------------------HLRAV 129
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P DEAK FA N+LSFIETSALD++NVE AFQNILT
Sbjct: 130 PTDEAKAFASENHLSFIETSALDASNVELAFQNILT 165
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/217 (64%), Positives = 150/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIQVD KTIKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T+ENVERWL+ELRDHAD NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLR+
Sbjct: 126 KSDLR---------------------------------------------------HLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK F ER LSFIETSAL++TNVE AFQ ILT
Sbjct: 135 VQTEDAKAFCEREGLSFIETSALEATNVEQAFQRILT 171
>gi|358055772|dbj|GAA98117.1| hypothetical protein E5Q_04800 [Mixia osmundae IAM 14324]
Length = 274
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 147/216 (68%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYD LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KTIKAQIWD
Sbjct: 41 EYDLLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDTKTIKAQIWD 100
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYDIAKH TY NV+RWL+EL+DHAD NIVIMLVG S
Sbjct: 101 TAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVQRWLKELKDHADSNIVIMLVGNKS 160
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
LR HLRAVP
Sbjct: 161 DLR---------------------------------------------------HLRAVP 169
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+EAK FA LSFIETSALD++NVE AFQ ILT
Sbjct: 170 TEEAKQFATDEGLSFIETSALDASNVENAFQTILTG 205
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/222 (63%), Positives = 156/222 (70%), Gaps = 52/222 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG+R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+SIQ + KT
Sbjct: 1 MGSRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH T+ENVERWL+ELRDHA+ NIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG S LR
Sbjct: 121 MLVGNKSDLR-------------------------------------------------- 130
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV DEA F+E++NL+FIETSALD++ V+T+FQ ILT
Sbjct: 131 -HLRAVETDEAMAFSEQHNLAFIETSALDASGVDTSFQRILT 171
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/217 (64%), Positives = 150/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSIQVD KTIKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K +T+ENVERWL+ELRDHAD NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKQVTFENVERWLKELRDHADSNIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLR+
Sbjct: 126 KSDLR---------------------------------------------------HLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+++ F E+ LSFIETSAL+STNVE AFQ ILT
Sbjct: 135 VQTDDSQAFCEKEGLSFIETSALESTNVEQAFQRILT 171
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 147/214 (68%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAV
Sbjct: 127 L---------------------------------------------------KHLRAVTT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAK F+ N LSFIETSALD++NVE+AFQ ILT
Sbjct: 136 DEAKAFSTENGLSFIETSALDASNVESAFQTILT 169
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/222 (63%), Positives = 155/222 (69%), Gaps = 52/222 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M TR DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+SIQ + KT
Sbjct: 1 MATRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH T+ENVERWL+ELRDHA+ NIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG S LR
Sbjct: 121 MLVGNKSDLR-------------------------------------------------- 130
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV DEA F+E++NL+FIETSALD++ V+TAFQ ILT
Sbjct: 131 -HLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILT 171
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 140/216 (64%), Positives = 149/216 (68%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+K T+ NV+RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKEQTFGNVQRWLKELRDHADTNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P D+AK FA N LSFIETSALD++NVE AFQ LT
Sbjct: 133 PTDDAKAFAAENGLSFIETSALDASNVELAFQQELT 168
>gi|449489778|ref|XP_002187627.2| PREDICTED: ras-related protein Rab-11A-like [Taeniopygia guttata]
Length = 232
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/208 (66%), Positives = 148/208 (71%), Gaps = 51/208 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT+KAQIWDTAGQERY
Sbjct: 30 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERY 89
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDIAK+LTYEN ERWL+EL+DHAD NIVIMLVG S LR
Sbjct: 90 RAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLR---- 145
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLRAVP DEA++F
Sbjct: 146 -----------------------------------------------HLRAVPTDEARSF 158
Query: 194 AERNNLSFIETSALDSTNVETAFQNILT 221
AE+N LSF+ETSALDSTNVETAF NIL+
Sbjct: 159 AEKNGLSFLETSALDSTNVETAFHNILS 186
>gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS]
Length = 227
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/233 (61%), Positives = 153/233 (65%), Gaps = 68/233 (29%)
Query: 6 DEYDYLFK-----------------VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEF 48
DEYD+LFK +VLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEF
Sbjct: 4 DEYDFLFKGTSYTPRPAMSNPILRALVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEF 63
Query: 49 ATRSIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRE 108
ATRSIQVD KTIK+QIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+E
Sbjct: 64 ATRSIQVDSKTIKSQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKE 123
Query: 109 LRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNI 168
LRDHAD NIVIMLVG S LR
Sbjct: 124 LRDHADSNIVIMLVGNKSDLR--------------------------------------- 144
Query: 169 VIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 145 ------------HLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQNILT 185
>gi|189194986|ref|XP_001933831.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979710|gb|EDU46336.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|451995174|gb|EMD87643.1| hypothetical protein COCHEDRAFT_1159917 [Cochliobolus
heterostrophus C5]
Length = 208
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 149/216 (68%), Gaps = 54/216 (25%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD + VLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDVM---VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIW 60
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 61 DTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNK 120
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 121 SDLR---------------------------------------------------HLRAV 129
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 130 PTEEAKQFASENNLSFIETSALDASNVELAFQNILT 165
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 155/221 (70%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M +EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+SIQ + KTI
Sbjct: 1 MAGKEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH+T+ENVERWL+ELRDHA+ NIV+M
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
L+G S LR
Sbjct: 121 LIGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR V +EA FA+++NL+F+ETSALD++ V++AFQ ILT
Sbjct: 130 HLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILT 170
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 155/222 (69%), Gaps = 52/222 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M +R DE YDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+SIQ + KT
Sbjct: 1 MASRVDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH T+ENVERWL+ELRDHA+ NIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG S LR
Sbjct: 121 MLVGNKSDLR-------------------------------------------------- 130
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV DEA F+E++NL+FIETSALD++ V+TAFQ ILT
Sbjct: 131 -HLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILT 171
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 139/217 (64%), Positives = 150/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+IQVD KTIKAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K TYENVERWL+ELRDHAD NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKQATYENVERWLKELRDHADSNIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S L+ HLR
Sbjct: 126 KSDLK---------------------------------------------------HLRG 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+A+ F+E+ LSFIETSAL++TNVE AFQ+ILT
Sbjct: 135 VATDDAQRFSEKEGLSFIETSALEATNVEKAFQSILT 171
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 137/214 (64%), Positives = 148/214 (69%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDI+KH TY NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+EAK F+ N LSFIETSALD++NVE+AFQ ILT
Sbjct: 136 EEAKNFSAENELSFIETSALDASNVESAFQTILT 169
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 146/211 (69%), Gaps = 51/211 (24%)
Query: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQ 70
+ VVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIWDTAGQ
Sbjct: 3 VLTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 62
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRR 130
ERYRAITSAYYRGAVGALLVYDI+KH TY+NV RWL+ELRDHAD NIVIMLVG S LR
Sbjct: 63 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLR- 121
Query: 131 YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEA 190
HLRAVP DEA
Sbjct: 122 --------------------------------------------------HLRAVPTDEA 131
Query: 191 KTFAERNNLSFIETSALDSTNVETAFQNILT 221
K FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 132 KQFASENNLSFIETSALDASNVELAFQNILT 162
>gi|169597663|ref|XP_001792255.1| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
Length = 215
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 148/219 (67%), Gaps = 54/219 (24%)
Query: 6 DEYDY---LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
DEYD VLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKA
Sbjct: 4 DEYDVSPACHTFVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA 63
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLV
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLV 123
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G S LR HL
Sbjct: 124 GNKSDLR---------------------------------------------------HL 132
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 133 RAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILT 171
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/217 (61%), Positives = 152/217 (70%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 113 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 172
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 173 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVG- 231
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DLRHLRA
Sbjct: 232 --------------------------------------------------NKADLRHLRA 241
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER + F+ETSAL+S NVE+AF +LT
Sbjct: 242 VSVEDAKGFAERESTFFMETSALESMNVESAFTEVLT 278
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/220 (61%), Positives = 153/220 (69%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +K
Sbjct: 27 GRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVK 86
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWL+ELRDH D NIVIML
Sbjct: 87 AQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIML 146
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NK+DLRH
Sbjct: 147 VG---------------------------------------------------NKADLRH 155
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAV ++AK FAER + F+ETSAL+S NVE+AF +LT
Sbjct: 156 LRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLT 195
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 146/214 (68%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI VD KTIKAQIWDT
Sbjct: 7 YDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTIKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAIT+AYYRGAVGALLVYDI KH +Y NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDITKHGSYTNVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAK F+ N LSFIETSALD+TNVE+AFQ LT
Sbjct: 136 DEAKAFSTENGLSFIETSALDATNVESAFQTTLT 169
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/215 (65%), Positives = 147/215 (68%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI+K TYENV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKQQTYENVTRWLKELRDHADTNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
D+AK FA N LSFIETSALD++NVE AFQ L
Sbjct: 133 STDDAKQFASENGLSFIETSALDASNVELAFQQEL 167
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/214 (64%), Positives = 148/214 (69%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
+DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLE+KSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSINVDGKTLKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAIT+AYYRGAVGALLVYDI+KH TY NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+EAK FA N LSFIETSALD++NVE+AFQ ILT
Sbjct: 136 EEAKAFAAENGLSFIETSALDASNVESAFQTILT 169
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 151/214 (70%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATR++QVD KT+KAQIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKTVKAQIWDT 68
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAK T++NV+RWL+ELRDHAD NIVIMLVG S
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDHADSNIVIMLVGNKSD 128
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L+ HLRAV
Sbjct: 129 LK---------------------------------------------------HLRAVLT 137
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
D A++FAE NNLSF+ETSALD++NVE AFQ+ILT
Sbjct: 138 DVAQSFAEENNLSFMETSALDASNVEAAFQSILT 171
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 148/214 (69%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
+DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLE+KSTIGVEFATR+I VD KT+KAQIWDT
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISVDGKTLKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAIT+AYYRGAVGALLVYDIAKH TY NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+EAK F+ N LSFIETSALD++NVE+AFQ ILT
Sbjct: 136 EEAKAFSAENGLSFIETSALDASNVESAFQTILT 169
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/219 (62%), Positives = 150/219 (68%), Gaps = 51/219 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T + +DYLFKVVLIGDSGVGKSNLLSRFTRNEFN+E+KSTIGVEFATRSI V+ KT+KA
Sbjct: 2 TEQSNFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINVEGKTLKA 61
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAIT+AYYRGAVGALLVYDI+KH TY NV RWL+ELRDHAD NIVIMLV
Sbjct: 62 QIWDTAGQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLV 121
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G S L +HL
Sbjct: 122 GNKSDL---------------------------------------------------KHL 130
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP +EAK FA N LSFIETSALD++NVE+AFQ ILT
Sbjct: 131 RAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILT 169
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/216 (63%), Positives = 147/216 (68%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALL YD+ K T++NV RWL+ELRDHAD NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLCYDLTKSQTFDNVTRWLKELRDHADTNIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLRAV
Sbjct: 124 SDLR---------------------------------------------------HLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P D+AK FA N LSFIETSALD++NVE AFQ LT
Sbjct: 133 PTDDAKAFAAENGLSFIETSALDASNVELAFQQELT 168
>gi|363746030|ref|XP_003643501.1| PREDICTED: ras-related protein Rab-11A-like, partial [Gallus
gallus]
Length = 156
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/207 (67%), Positives = 146/207 (70%), Gaps = 51/207 (24%)
Query: 15 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYR 74
VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT+KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYR 60
Query: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRG 134
AITSAYYRGAVGALLVYDIAK+LTYEN ERWL EL+DHAD NIVIMLVG S LR
Sbjct: 61 AITSAYYRGAVGALLVYDIAKYLTYENAERWLAELQDHADANIVIMLVGNKSDLR----- 115
Query: 135 AVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFA 194
HLRAVP DEA++FA
Sbjct: 116 ----------------------------------------------HLRAVPTDEARSFA 129
Query: 195 ERNNLSFIETSALDSTNVETAFQNILT 221
ERN LSF+ETSALDSTNVETAF NIL+
Sbjct: 130 ERNGLSFLETSALDSTNVETAFHNILS 156
>gi|326935770|ref|XP_003213940.1| PREDICTED: ras-related protein Rab-11A-like, partial [Meleagris
gallopavo]
Length = 252
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 148/212 (69%), Gaps = 51/212 (24%)
Query: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQ 70
L VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KT+KAQIWDTAGQ
Sbjct: 17 LHPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQ 76
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRR 130
ERYRAITSAYYRGAVGALLVYDIAK+LTYEN ERWL EL+DHAD NI+IMLVG S LR
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLTELQDHADANIIIMLVGNKSDLR- 135
Query: 131 YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEA 190
HLRAVP DEA
Sbjct: 136 --------------------------------------------------HLRAVPTDEA 145
Query: 191 KTFAERNNLSFIETSALDSTNVETAFQNILTA 222
++FAE+N LSF+ETSALDSTNVE AF NIL+A
Sbjct: 146 RSFAEKNGLSFLETSALDSTNVEMAFHNILSA 177
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 139/217 (64%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIQVD KTIKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K +T+ENVERWL+ELRDHAD NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S L +HLR
Sbjct: 126 KSDL---------------------------------------------------KHLRD 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V + A+ F ER LSFIETSAL+STNVE AFQ ILT
Sbjct: 135 VQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILT 171
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 152/218 (69%), Gaps = 51/218 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
+ED+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI + KTIKAQ
Sbjct: 169 KEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQ 228
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAITSAYYRGAVGALLVYDI KH+++ENVERWL+ELR+HAD N VIMLVG
Sbjct: 229 IWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVIMLVG 288
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S LR HLR
Sbjct: 289 NKSDLR---------------------------------------------------HLR 297
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
AVP +EA FAE+NNL+FIETSAL++ V++AFQ ILT
Sbjct: 298 AVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILT 335
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 152/218 (69%), Gaps = 51/218 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
+ED+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI + KTIKAQ
Sbjct: 5 KEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQ 64
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAITSAYYRGAVGALLVYDI KH+++ENVERWL+ELR+HAD N VIMLVG
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVIMLVG 124
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S LR HLR
Sbjct: 125 NKSDLR---------------------------------------------------HLR 133
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
AVP +EA FAE+NNL+FIETSAL++ V++AFQ ILT
Sbjct: 134 AVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILT 171
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 136/216 (62%), Positives = 147/216 (68%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYD K T+ N ERWL+ELR+HAD+NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVG-- 121
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK D +H+RA+
Sbjct: 122 -------------------------------------------------NKIDQKHVRAI 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
D+ FAE LSFIETSALD+TNVE AFQNILT
Sbjct: 133 KTDQGAEFAETRKLSFIETSALDATNVELAFQNILT 168
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/216 (62%), Positives = 147/216 (68%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYD K T+ N ERWL+ELR+HAD+NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVG-- 121
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK D +H+RA+
Sbjct: 122 -------------------------------------------------NKIDQKHVRAI 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
D+ FAE LSFIETSALD+TNVE AFQNILT
Sbjct: 133 KTDQGAEFAEARKLSFIETSALDATNVELAFQNILT 168
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 151/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K IKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI +H+T+ENVERWL+EL+DH D NIV+MLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S+LR HLRA
Sbjct: 126 KSVLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V AD+ ++F+E+ L F+ETSAL+STNVE AF+ ILT
Sbjct: 135 VSADDGQSFSEKEGLFFMETSALESTNVENAFKQILT 171
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 153/217 (70%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF++ESKSTIGVEFATRS+ VD+K IKAQ+
Sbjct: 7 DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQL 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI +H+T+ENVERWL+ELRDH D N+VIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP +EA++F+ER N+ F+ETSALD+TNVE AF ++LT
Sbjct: 136 VPTEEARSFSERENMFFMETSALDATNVEQAFTHVLT 172
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/215 (62%), Positives = 149/215 (69%), Gaps = 51/215 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+++SKSTIGVEFATRSI VD KT+KAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDIAKH TY++V RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYDSVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+EAK F+ N LSFIETSALD++NV++AFQ ILT
Sbjct: 136 EEAKAFSTENELSFIETSALDASNVDSAFQTILTG 170
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/217 (62%), Positives = 150/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K IKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKMIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI +H+T+ENVERWL+ELRDH + NIV+MLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVVMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLRA
Sbjct: 126 KSDLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++A+TFAER L FIETSAL+STNVE AF+ +LT
Sbjct: 135 VSTEDAQTFAEREGLYFIETSALESTNVENAFKQVLT 171
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 154/217 (70%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ +T+KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA+GALLVYD+ K +T++NV RWL+ELRDHAD NIVIML+G
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL+HLRA
Sbjct: 125 --------------------------------------------------NKTDLKHLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++A+++AE+ LSFIETSAL++TNVE AFQ IL+
Sbjct: 135 VATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILS 171
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/222 (60%), Positives = 153/222 (68%), Gaps = 52/222 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ +T
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWL+ELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
ML+G NK+DL
Sbjct: 121 MLIG---------------------------------------------------NKTDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+HLRAV ++A+ +AER LSFIETSAL++TNVE AFQ IL+
Sbjct: 130 KHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILS 171
>gi|302837804|ref|XP_002950461.1| RabA/Rab11 [Volvox carteri f. nagariensis]
gi|300264466|gb|EFJ48662.1| RabA/Rab11 [Volvox carteri f. nagariensis]
Length = 219
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/221 (63%), Positives = 150/221 (67%), Gaps = 54/221 (24%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQ---VDQKTI 60
++D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIQ VD KTI
Sbjct: 5 QDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQAGTVDGKTI 64
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K +T+ENVERWL+ELRDHAD NIVIM
Sbjct: 65 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADANIVIM 124
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S L +
Sbjct: 125 LVGNKSDL---------------------------------------------------K 133
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR V + A+ F ER LSFIETSALDSTNVE AFQ ILT
Sbjct: 134 HLRDVQTEVAQAFCEREGLSFIETSALDSTNVEKAFQQILT 174
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/219 (60%), Positives = 150/219 (68%), Gaps = 51/219 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
++EDEYDYLFK VLIGDSGVGKSNLL RFTRNEFN+ESKSTIGVEFATR+I +D K IKA
Sbjct: 2 SQEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKA 61
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGAL+VYDI K +++NV RWL+ELRDHAD NIVIMLV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIMLV 121
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NK+DL HL
Sbjct: 122 G---------------------------------------------------NKTDLLHL 130
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAV +EA+ FA NNLSFIETSA+D++NVE AFQ +LT
Sbjct: 131 RAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLT 169
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 154/217 (70%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ +T+KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA+GALLVYD+ K +T++NV RWL+ELRDHAD NIVIML+G
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL+HLRA
Sbjct: 125 --------------------------------------------------NKTDLKHLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++A+++AE+ LSFIETSAL++TNVE AFQ IL+
Sbjct: 135 VATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILS 171
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 152/221 (68%), Gaps = 52/221 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ +T
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWL+ELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
ML+G NK+DL
Sbjct: 121 MLIG---------------------------------------------------NKTDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+HLRAV ++A+ FAE+ LSFIETSAL++TNVE AFQ IL
Sbjct: 130 KHLRAVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTIL 170
>gi|346320690|gb|EGX90290.1| Ras GTPase Rab11, putative [Cordyceps militaris CM01]
Length = 204
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 144/207 (69%), Gaps = 51/207 (24%)
Query: 15 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYR 74
VLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIWDTAGQERYR
Sbjct: 5 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYR 64
Query: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRG 134
AITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG S LR
Sbjct: 65 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLR----- 119
Query: 135 AVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFA 194
HLRAVP +EAK FA
Sbjct: 120 ----------------------------------------------HLRAVPTEEAKAFA 133
Query: 195 ERNNLSFIETSALDSTNVETAFQNILT 221
N+LSFIETSALD++NVE AFQNILT
Sbjct: 134 SENHLSFIETSALDASNVELAFQNILT 160
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 151/216 (69%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ +T+KAQI
Sbjct: 6 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWL+ELRDHAD NIVIML+G
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL+HLRA
Sbjct: 125 --------------------------------------------------NKTDLKHLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++A+ +AE+ LSFIETSAL++TNVE AFQ IL
Sbjct: 135 VATEDAQGYAEKEGLSFIETSALEATNVENAFQTIL 170
>gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 221
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/208 (65%), Positives = 145/208 (69%), Gaps = 51/208 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
+VLIGDSGVGKSNLLSRFTRNEFNL++KSTIGVEFATRSIQVD KTIKAQIWDTAGQERY
Sbjct: 22 MVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 81
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDI+KH TY+NV RWL+ELRDHAD NIVIMLVG S LR
Sbjct: 82 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLR---- 137
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLRAVP +EAK F
Sbjct: 138 -----------------------------------------------HLRAVPTEEAKQF 150
Query: 194 AERNNLSFIETSALDSTNVETAFQNILT 221
A NNLSFIETSALD++NVE AFQNILT
Sbjct: 151 ASENNLSFIETSALDASNVELAFQNILT 178
>gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gibberella zeae PH-1]
Length = 199
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/206 (65%), Positives = 144/206 (69%), Gaps = 51/206 (24%)
Query: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYRA 75
+IGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIWDTAGQERYRA
Sbjct: 1 MIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 60
Query: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGA 135
ITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG S LR
Sbjct: 61 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLR------ 114
Query: 136 VGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFAE 195
HLRAVP +EAK+FA
Sbjct: 115 ---------------------------------------------HLRAVPTEEAKSFAS 129
Query: 196 RNNLSFIETSALDSTNVETAFQNILT 221
N+LSFIETSALD++NVE AFQNILT
Sbjct: 130 ENHLSFIETSALDASNVELAFQNILT 155
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 152/217 (70%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI+VD+K +KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENV+RWL+ELRDH D +IVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVDRWLKELRDHTDSSIVIMLVG- 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL HLRA
Sbjct: 126 --------------------------------------------------NKADLGHLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK +AE+ + FIETSAL+STNVE AF +LT
Sbjct: 136 VSTEDAKAYAEKESTFFIETSALESTNVENAFTEVLT 172
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 132/222 (59%), Positives = 153/222 (68%), Gaps = 52/222 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ +T
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWL+ELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
ML+G NK+DL
Sbjct: 121 MLIG---------------------------------------------------NKTDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+HLRAV ++A+++AE+ LSFIETSAL++ NVE AFQ IL+
Sbjct: 130 KHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILS 171
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 152/217 (70%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ +T+KAQI
Sbjct: 6 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWL+ELRDHAD NIVIML+G
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADYNIVIMLIG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL+HLRA
Sbjct: 125 --------------------------------------------------NKTDLKHLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++A+++AE+ LSFIETSAL++ NVE AFQ IL+
Sbjct: 135 VATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILS 171
>gi|403300397|ref|XP_003940927.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 136/205 (66%), Positives = 142/205 (69%), Gaps = 51/205 (24%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETS 205
HLRAVP DEA+ FAE+N + +T
Sbjct: 130 HLRAVPTDEARAFAEKNEANVRQTG 154
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 132/217 (60%), Positives = 150/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K IKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI +H+T+ENVERWL+EL+DH D NIV+MLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S+LR HLRA
Sbjct: 126 KSVLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V AD+ ++F+E+ L F+ETSAL+STNVE AF+ I T
Sbjct: 135 VSADDGQSFSEKEGLFFMETSALESTNVENAFKQIPT 171
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 132/222 (59%), Positives = 154/222 (69%), Gaps = 52/222 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ +T
Sbjct: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWL+ELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
ML+G NK+DL
Sbjct: 121 MLIG---------------------------------------------------NKTDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+HLRAV ++A+++AE+ L+FIETSAL++TNVE AFQ IL+
Sbjct: 130 KHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILS 171
>gi|332205939|ref|NP_001193765.1| ras-related protein Rab-11A isoform 2 [Homo sapiens]
gi|332235942|ref|XP_003267164.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Nomascus
leucogenys]
gi|332844085|ref|XP_003314767.1| PREDICTED: uncharacterized protein LOC453523 isoform 1 [Pan
troglodytes]
gi|397515598|ref|XP_003828036.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Pan paniscus]
gi|402874625|ref|XP_003901133.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Papio anubis]
gi|426379451|ref|XP_004056411.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Gorilla gorilla
gorilla]
gi|194390126|dbj|BAG61825.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 142/204 (69%), Gaps = 51/204 (25%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIET 204
HLRAVP DEA+ FAE+N + +T
Sbjct: 130 HLRAVPTDEARAFAEKNEANVRQT 153
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 148/215 (68%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYDYLFKVVLIGDSGVGKSNLLSRFT+N F L+SKSTIGVEFATR+IQVD KTIKAQIW
Sbjct: 13 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQVDTKTIKAQIW 72
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYD+ K +T+ENV+RWL+ELRDHAD NIV+ML+G
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIG-- 130
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DLRHLR+V
Sbjct: 131 -------------------------------------------------NKIDLRHLRSV 141
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
++A +FAE L FIETSALD+TNVE AFQ +L
Sbjct: 142 AVEDAASFAESEGLFFIETSALDATNVEKAFQTVL 176
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/217 (61%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+QVD K +KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWL+ELRDH D NIV+MLVG
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 128 KSDLR---------------------------------------------------HLVA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V DE K FAER +L F+ETSAL+STNVE AF +LT
Sbjct: 137 VQTDEGKAFAERESLYFMETSALESTNVENAFAEVLT 173
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 150/216 (69%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ T+KAQI
Sbjct: 6 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWL+ELRDHAD NIVIML+G
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL+HLRA
Sbjct: 125 --------------------------------------------------NKTDLKHLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++A+ ++E+ LSFIETSAL++TNVE AFQ IL
Sbjct: 135 VATEDAQGYSEKEGLSFIETSALEATNVEKAFQTIL 170
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 132/222 (59%), Positives = 153/222 (68%), Gaps = 52/222 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ +T
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWL+ELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
ML+G NK+DL
Sbjct: 121 MLIG---------------------------------------------------NKTDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+HLRAV ++A+++AE+ LSFIETSAL++ NVE AFQ IL+
Sbjct: 130 KHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILS 171
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/217 (61%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+QVD K +KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWL+ELRDH D NIV+MLVG
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 128 KSDLR---------------------------------------------------HLVA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V DE K FAER +L F+ETSAL+STNVE AF +LT
Sbjct: 137 VQTDEGKAFAERESLYFMETSALESTNVENAFAEVLT 173
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/217 (61%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+QVD K +KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWL+ELRDH D NIV+MLVG
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 128 KSDLR---------------------------------------------------HLVA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V DE K FAER +L F+ETSAL+STNVE AF +LT
Sbjct: 137 VQTDEGKAFAERESLYFMETSALESTNVENAFAEVLT 173
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/219 (60%), Positives = 149/219 (68%), Gaps = 51/219 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
+EDEYDYLFK VLIGDSGVGKSNLL RFTRNEFN+ESKSTIGVEFATR+I +D K IKA
Sbjct: 2 CQEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKA 61
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGAL+VYDI K +++NV RWL+ELR+HAD NIVIMLV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLV 121
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NK+DL HL
Sbjct: 122 G---------------------------------------------------NKTDLLHL 130
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAV +EA+ FA NNLSFIETSA+D++NVE AFQ +LT
Sbjct: 131 RAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLT 169
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFK+VLIGDSGVGKSNLLSRF+RNEFNLESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 8 EDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYDI +H+T+ENVERWL+ELRDH DQNIVIMLVG
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 128 KADLR---------------------------------------------------HLRA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER N F+ETSAL+S NVE AF +LT
Sbjct: 137 VSTEDAKAFAERENTFFMETSALESLNVENAFTEVLT 173
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 150/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q++ KTIKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T+EN++RWLRELRDHAD NIVIM+VG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL HLR+
Sbjct: 125 --------------------------------------------------NKSDLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ + AE+ LSF+ETSAL++ NVE AFQ +L+
Sbjct: 135 VPEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLS 171
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 149/216 (68%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q++ KTIKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T+EN++RWLRELRDHAD NIVIM+VG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL HLR+
Sbjct: 125 --------------------------------------------------NKSDLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP ++ + AE+ LSF+ETSAL++ NVE AFQ IL
Sbjct: 135 VPEEDGQALAEKEGLSFLETSALEALNVEKAFQTIL 170
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus anophagefferens]
Length = 186
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/221 (60%), Positives = 152/221 (68%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG ++EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFAT+SI + KTI
Sbjct: 1 MGGDDNEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSIVAEGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ KH T+ENVERWL+ELRDHA+ NIV+M
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKHATFENVERWLKELRDHAEANIVVM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S DL+
Sbjct: 121 LVGNKS---------------------------------------------------DLK 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP +EA AE++NL+FIETSALD++ V+ AFQNILT
Sbjct: 130 PQRAVPTEEAMAMAEQHNLAFIETSALDASGVDIAFQNILT 170
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 151/216 (69%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ +T+KAQI
Sbjct: 9 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 68
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA+GALLVYD+ K T++NV RWL+ELRDHAD NIVIML+G
Sbjct: 69 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIG- 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL+HLRA
Sbjct: 128 --------------------------------------------------NKTDLKHLRA 137
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++A+++AE+ LSFIETSAL++TNVE AFQ L
Sbjct: 138 VATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTL 173
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/221 (60%), Positives = 151/221 (68%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M +DEYDYLFKVVLIGD+GVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIQ + K I
Sbjct: 1 MARSDDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKII 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K +++NV+RWL+EL+DHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S DL+
Sbjct: 121 LVGNKS---------------------------------------------------DLQ 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HL+AV D+A FAE N LSFIETSALD++NVE AF++IL+
Sbjct: 130 HLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILS 170
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q++ KTIKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T+EN+ RWLRELRDHAD NIVIM+VG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENINRWLRELRDHADSNIVIMMVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL HLR+
Sbjct: 125 --------------------------------------------------NKSDLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ + AE+ LSF+ETSAL++ NVE AFQ IL+
Sbjct: 135 VPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILS 171
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 146/216 (67%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYD K T+ N ERWL+ELR+HAD+NIVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVG-- 121
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK D +H+R V
Sbjct: 122 -------------------------------------------------NKIDEKHMRDV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+A FA+ LSFIETSALD+TNVE AFQNILT
Sbjct: 133 KTSDAVEFADEMKLSFIETSALDATNVELAFQNILT 168
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 150/216 (69%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYDYLFK+VLIGDSGVGKSNLLSRFTRN F+L+SKSTIGVEFATR+IQV+ K +KAQIW
Sbjct: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYD+ K T+ENV+RWL+ELRDHAD NIV+ML+G
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIG-- 130
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL+HLR+V
Sbjct: 131 -------------------------------------------------NKIDLKHLRSV 141
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
++A +FAER LSF+ETSALD+TNV+ AFQ +LT
Sbjct: 142 SLEDATSFAEREGLSFVETSALDATNVDKAFQTVLT 177
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+QVD K +KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+EN ERWL+ELRDH D NIV+MLVG
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPNIVVMLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 128 KSDLR---------------------------------------------------HLVA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V DE K FAER +L F+ETSAL+STNVE AF +LT
Sbjct: 137 VQTDEGKAFAERESLYFMETSALESTNVEDAFAEVLT 173
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERW+RELRDH D NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 126 KADLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++AK FAER N F+ETSAL++ NVE AF +LT
Sbjct: 135 VPTEDAKAFAERENAFFMETSALEAMNVEGAFTEVLT 171
>gi|403419077|emb|CCM05777.1| predicted protein [Fibroporia radiculosa]
Length = 237
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/239 (58%), Positives = 150/239 (62%), Gaps = 76/239 (31%)
Query: 8 YDYLFKVVLIGDSGVGKS-------------------------NLLSRFTRNEFNLESKS 42
+DYLFKVVLIGDSGVGKS NLLSRFTRNEFNLE+KS
Sbjct: 7 FDYLFKVVLIGDSGVGKSCVPLRACLATSRLIKFILSFVSQHSNLLSRFTRNEFNLETKS 66
Query: 43 TIGVEFATRSIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV 102
TIGVEFATRSI VD KT+KAQIWDTAGQERYRAIT+AYYRGAVGALLVYDIAKH TY +V
Sbjct: 67 TIGVEFATRSITVDGKTLKAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHGTYVDV 126
Query: 103 ERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRD 162
RWL+ELRDHAD NIVIMLVG S
Sbjct: 127 TRWLKELRDHADSNIVIMLVGNKS------------------------------------ 150
Query: 163 HADQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DL+HLRAVP DEAKTFA N LSFIETSALD++NVE+AFQ ILT
Sbjct: 151 ---------------DLKHLRAVPTDEAKTFATENGLSFIETSALDASNVESAFQTILT 194
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 154/222 (69%), Gaps = 52/222 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R DE YDYLFKVVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ +T
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWL+ELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
ML+G NK+DL
Sbjct: 121 MLIG---------------------------------------------------NKTDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+HLRAV ++A+++AE+ L+F+ETSAL++TNV+ AFQ IL+
Sbjct: 130 KHLRAVATEDAQSYAEKEGLAFVETSALEATNVDKAFQTILS 171
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/222 (59%), Positives = 150/222 (67%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q+D KT
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G NK DL
Sbjct: 121 MMAG---------------------------------------------------NKCDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+HLRAV ++ + AER LSF+ETSAL++TN+E AFQ ILT
Sbjct: 130 KHLRAVSEEDGQGLAEREELSFLETSALEATNIEKAFQTILT 171
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRS+Q D K IKAQI
Sbjct: 6 DDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQTDGKVIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI+K ++EN ERWL+ELRDHADQNIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAERWLKELRDHADQNIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL+HLRA
Sbjct: 126 KS---------------------------------------------------DLKHLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +E + +A+ LSFIETSALD+++VE AF ILT
Sbjct: 135 VTTEEGQQYADARGLSFIETSALDASHVEEAFVRILT 171
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/221 (60%), Positives = 150/221 (67%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M +DEYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+S+Q + KTI
Sbjct: 1 MARSDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ VE+WL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S L +
Sbjct: 121 LVGNKSDL---------------------------------------------------K 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV +E K FAE+++LSFIETSALD+TNVE AF +LT
Sbjct: 130 HLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLT 170
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/216 (61%), Positives = 146/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+QVD K +KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWL+ELRDH D NIV+MLVG
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 128 KSDLR---------------------------------------------------HLVA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V DE K FAER +L F+ETSAL+STNVE AF +L
Sbjct: 137 VQTDEGKAFAERESLYFMETSALESTNVENAFAEVL 172
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/216 (61%), Positives = 148/216 (68%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ KTIKAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQVEGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T+ENV RWL+ELRDHAD NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKPTTFENVGRWLKELRDHADSNIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S L+ HLR
Sbjct: 126 KSDLK---------------------------------------------------HLRG 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++A++FAE+ LSF+ETSAL++TNVE AFQ IL
Sbjct: 135 VSTEDAQSFAEKEGLSFLETSALEATNVERAFQTIL 170
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 149/216 (68%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q++ +TIKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T+EN++RWLRELRDHAD NIVIM+VG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL HLR+
Sbjct: 125 --------------------------------------------------NKSDLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP ++ + AE+ LSF+ETSAL++ NVE AFQ IL
Sbjct: 135 VPEEDGQALAEKEGLSFLETSALEALNVEKAFQTIL 170
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERW+REL+DH D NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 126 KADLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++AK FAER N F+ETSAL++ NVE AF +LT
Sbjct: 135 VPTEDAKAFAERENAFFMETSALEAMNVEDAFTEVLT 171
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 147/216 (68%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T+ENV+RWLRELRDHAD NIVIM+ G
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL HLRA
Sbjct: 125 --------------------------------------------------NKSDLNHLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V D+A+ AE+ LSF+ETSAL++ NVE AFQ IL
Sbjct: 135 VSGDDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 147/216 (68%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+IQV+ KT+KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T+ENV+RWLRELRDHAD NIVIML G
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMLAGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL HLRA
Sbjct: 126 KS---------------------------------------------------DLNHLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +D+A+ AE+ LSF+ETSAL++ NVE AFQ IL
Sbjct: 135 VSSDDAQNLAEKETLSFLETSALEALNVEKAFQTIL 170
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/216 (61%), Positives = 146/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+QVD K +KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWL+ELRDH D NIV+MLVG
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 128 KSDLR---------------------------------------------------HLVA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V DE K FAER +L F+ETSAL+STNVE AF +L
Sbjct: 137 VQTDEGKAFAERESLYFMETSALESTNVENAFAEVL 172
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++A+TFAER N F+ETSAL+S NVE AF +LT
Sbjct: 136 VSTEDARTFAERENTFFMETSALESLNVENAFTEVLT 172
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/232 (58%), Positives = 151/232 (65%), Gaps = 62/232 (26%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M T YDYLFKVVLIGDSGVGKS++LSRFTRNEFN++SKSTIGVEFATRS++VDQKTI
Sbjct: 1 MATEASSYDYLFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEVDQKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ NVERWL+EL+DHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKQSSFANVERWLKELKDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S L +
Sbjct: 121 LVGNKSDL---------------------------------------------------K 129
Query: 181 HLRAVPADEAKTFAER-----------NNLSFIETSALDSTNVETAFQNILT 221
HLRAVP EA+++ E N + FIETSALDSTNVE AFQNILT
Sbjct: 130 HLRAVPTAEAQSYTEEKSKLEDGTESSNPIRFIETSALDSTNVEAAFQNILT 181
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 132/217 (60%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER N F+ETSAL+S NVE AF +LT
Sbjct: 136 VSTEDAKAFAERENNFFMETSALESMNVENAFTEVLT 172
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 132/217 (60%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K+FAE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLT 172
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 132/217 (60%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K IKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKVIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 126 KADLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K FAER N F+ETSAL+STNVE AF +L+
Sbjct: 135 VSIEDGKAFAERENTYFMETSALESTNVENAFTEVLS 171
>gi|308476613|ref|XP_003100522.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
gi|308264778|gb|EFP08731.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
Length = 345
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 152/220 (69%), Gaps = 52/220 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
R++EYDYLFKVVLIGDSGVGKSNLLSRFTRN+F+LE+KSTIGVEFATRS+ ++ K IKA
Sbjct: 5 RDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFDLETKSTIGVEFATRSMMIEGKKIKAT 64
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD-QNIVIMLV 122
IWDTAGQERYRAITSAYYRG +GAL+VYDIAKH T+EN+ERWL+ELR+HAD Q+I IMLV
Sbjct: 65 IWDTAGQERYRAITSAYYRGTLGALVVYDIAKHQTFENIERWLKELRNHADQQDISIMLV 124
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G + LR HL
Sbjct: 125 GNKTDLR---------------------------------------------------HL 133
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
RAVP DEA FAERN +SFIETSALDSTNVE A +N+LTA
Sbjct: 134 RAVPTDEAAVFAERNQMSFIETSALDSTNVEEALRNLLTA 173
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 150/215 (69%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYDYLFK+VLIGDSGVGKSNLLSRFT+N F+L+SKSTIGVEFATR+I+V+ KTIKAQIW
Sbjct: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIEVEGKTIKAQIW 72
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYD+ K T++NV+RWL+ELRDHAD NIVIML+G
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDHADSNIVIMLIG-- 130
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL+HLR+V
Sbjct: 131 -------------------------------------------------NKMDLKHLRSV 141
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
++A +FAER LSFIETSALD+TNV+ AFQ +L
Sbjct: 142 AQEDAASFAEREGLSFIETSALDATNVDRAFQTVL 176
>gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involutus]
gi|50980850|gb|AAT91271.1| GTPase [Paxillus involutus]
gi|50980852|gb|AAT91272.1| GTPase [Paxillus involutus]
Length = 161
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 133/208 (63%), Positives = 143/208 (68%), Gaps = 51/208 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSI VD KT+KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTAGQERY 60
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDI+KH TY NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKS------- 113
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
DL+HLRAVP +EAK F
Sbjct: 114 --------------------------------------------DLKHLRAVPTEEAKNF 129
Query: 194 AERNNLSFIETSALDSTNVETAFQNILT 221
+ N LSFIETSALD++NVE+AFQ ILT
Sbjct: 130 SAENELSFIETSALDASNVESAFQTILT 157
>gi|148678258|gb|EDL10205.1| mCG22989, isoform CRA_a [Mus musculus]
Length = 149
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 138/196 (70%), Gaps = 51/196 (26%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAER 196
HLRAVP DEA+ FAE+
Sbjct: 130 HLRAVPTDEARAFAEQ 145
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/229 (59%), Positives = 150/229 (65%), Gaps = 63/229 (27%)
Query: 6 DEYDYLFK------------VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI 53
DEYD+LFK VVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSI
Sbjct: 4 DEYDFLFKALADSWAIPSRAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSI 63
Query: 54 QVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHA 113
Q+D KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K ++ENV RWL+ELRDHA
Sbjct: 64 QIDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIGKSSSFENVSRWLKELRDHA 123
Query: 114 DQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 173
D NIVIMLVG
Sbjct: 124 DSNIVIMLVG-------------------------------------------------- 133
Query: 174 GNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
NK+D RHLRAV ++ K FA + LSFIETSAL++TNV+ AFQ ILT+
Sbjct: 134 -NKTDKRHLRAVSTEDGKAFAAEHGLSFIETSALEATNVDLAFQEILTS 181
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/188 (70%), Positives = 134/188 (71%), Gaps = 51/188 (27%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSA
Sbjct: 61 KAQIWDTAGQERYRAITSA----------------------------------------- 79
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
YYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVGNKSDLR
Sbjct: 80 ----------YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 129
Query: 181 HLRAVPAD 188
HLRAVP D
Sbjct: 130 HLRAVPTD 137
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/217 (60%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER N F+ETSAL+S NVE AF +LT
Sbjct: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLT 172
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KTIKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T+EN++RWLRELRDHAD NIVIM+VG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL HLR+
Sbjct: 125 --------------------------------------------------NKSDLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ + AE+ LSF+ETSAL++ NVE AFQ +L+
Sbjct: 135 VAEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLS 171
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/214 (62%), Positives = 145/214 (67%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFN +SKSTIGVEFATRS++VD K +KAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEVDGKVVKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGAVGALLVYDI+K T+ NV RWL+ELRDHAD +IV+MLVG S
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKQPTFANVARWLKELRDHADSSIVVMLVGNKS- 125
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
DL+HLRAV
Sbjct: 126 --------------------------------------------------DLKHLRAVLT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEAK FA N LSFIETSALD++NVE AFQ ILT
Sbjct: 136 DEAKQFAMDNGLSFIETSALDASNVEAAFQQILT 169
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIM VG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER N F+ETSAL+S NVE AF +L+
Sbjct: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLS 172
>gi|50980854|gb|AAT91273.1| GTPase [Paxillus involutus]
gi|50980856|gb|AAT91274.1| GTPase [Paxillus involutus]
Length = 161
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/208 (63%), Positives = 143/208 (68%), Gaps = 51/208 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSI VD KT+KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSISVDGKTVKAQIWDTAGQERY 60
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDI+KH TY NV RWL+ELRDHAD NIVIMLVG S
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKS------- 113
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
DL+HLRAVP +EAK F
Sbjct: 114 --------------------------------------------DLKHLRAVPTEEAKNF 129
Query: 194 AERNNLSFIETSALDSTNVETAFQNILT 221
+ N LSFIETSALD++NVE+AFQ ILT
Sbjct: 130 STENELSFIETSALDASNVESAFQTILT 157
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+AK FAER N F+ETSAL+S NV+ AF +LT
Sbjct: 136 VSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLT 172
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 126 KADLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER + F+ETSAL+S NVE+AF +LT
Sbjct: 135 VSVEDAKGFAERESTFFMETSALESMNVESAFTEVLT 171
>gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
gi|114193621|gb|EAU35321.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
Length = 206
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/209 (64%), Positives = 142/209 (67%), Gaps = 51/209 (24%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQER 72
K L DSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIWDTAGQER
Sbjct: 7 KPQLTDDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQER 66
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYY 132
YRAITSAYYRGAVGALLVYDI+KH TY+NV RWL+ELRDHAD NIVIMLVG S LR
Sbjct: 67 YRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLR--- 123
Query: 133 RGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKT 192
HLRAVP +EAK
Sbjct: 124 ------------------------------------------------HLRAVPTEEAKQ 135
Query: 193 FAERNNLSFIETSALDSTNVETAFQNILT 221
FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 136 FASENNLSFIETSALDASNVELAFQNILT 164
>gi|302505565|ref|XP_003014489.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|302656407|ref|XP_003019957.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
gi|291178310|gb|EFE34100.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|291183734|gb|EFE39333.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/232 (60%), Positives = 149/232 (64%), Gaps = 67/232 (28%)
Query: 6 DEYDYLFK-------VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK 58
DEYD VVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD K
Sbjct: 4 DEYDREIADSVGTCIVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSK 63
Query: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
TIK+QIWDTAGQERYRAITSAYYRGAVGALLVYD++KH TYENV RWL+ELRDHAD NIV
Sbjct: 64 TIKSQIWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIV 123
Query: 119 IMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
IMLVG S LR
Sbjct: 124 IMLVGNKSDLR------------------------------------------------- 134
Query: 179 LRHLRAVPADEAKTFA---------ERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP +EAK FA NNLSFIETSALD++NVE AFQNILT
Sbjct: 135 --HLRAVPTEEAKQFAIPQLTLMVLGENNLSFIETSALDASNVELAFQNILT 184
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 126 KADLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER + F+ETSAL++ NVE+AF +LT
Sbjct: 135 VSVEDAKAFAERESTFFMETSALEAMNVESAFTEVLT 171
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/222 (59%), Positives = 149/222 (67%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QVD KT
Sbjct: 1 MGHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G S DL
Sbjct: 121 MMAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+HLRAV ++ AE+ LSF+ETSAL++TN+E AFQ ILT
Sbjct: 130 KHLRAVLEEDGHALAEKEGLSFLETSALEATNIEKAFQTILT 171
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K+FAE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLT 172
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER + F+ETSAL+S NVE AF +LT
Sbjct: 136 VTTEDAKAFAERESTFFMETSALESLNVENAFTEVLT 172
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K+FAER +L F+ETSAL++TNV++AF +LT
Sbjct: 136 VSTEDGKSFAERESLYFMETSALEATNVDSAFAEVLT 172
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+AK FAER N F+ETSAL+S NV+ AF +LT
Sbjct: 136 VSTDDAKGFAERENTFFMETSALESLNVDNAFTEVLT 172
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVE+WL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVEKWLKELRDHTDANIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+AK FAER N F+ETSAL+S NV+ AF +LT
Sbjct: 136 VSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLT 172
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++A+ FAE+ N F+ETSAL+S NVE AF +LT
Sbjct: 136 VSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLT 172
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K+FAE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLT 172
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/222 (59%), Positives = 148/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G S DL
Sbjct: 121 MMAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV D+ + AER LSF+ETSAL++TN+E AFQ ILT
Sbjct: 130 SHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILT 171
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 149/221 (67%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M +DEYDYLFKVVLIGD+GVGKSNLLSRFTRNEF+LESKSTIG EFATRSIQ + K I
Sbjct: 1 MARSDDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGAEFATRSIQCEGKII 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K +++NV+RWL+EL+DHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S DL+
Sbjct: 121 LVGNKS---------------------------------------------------DLQ 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HL+AV D+A FAE N LSFIETSALD++ VE AF++IL+
Sbjct: 130 HLKAVTTDDASAFAESNGLSFIETSALDNSTVEEAFRSILS 170
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERW+REL+DH D NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 126 KADLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAE+ N F+ETSAL+S NVE AF +LT
Sbjct: 135 VSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLT 171
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/222 (59%), Positives = 148/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G S DL
Sbjct: 121 MMAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV D+ + AER LSF+ETSAL++TN+E AFQ ILT
Sbjct: 130 SHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILT 171
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 148/213 (69%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFKVVLIGD+GVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIQ + K IKAQIWDTA
Sbjct: 10 DYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTA 69
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRAITSAYYRGAVGALLVYDI K +++NV+RWL+EL+DHAD NIVIMLVG
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVG----- 124
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL+HL+AV D
Sbjct: 125 ----------------------------------------------NKSDLQHLKAVTTD 138
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+A FAE N LSFIETSALD++NVE AF++IL+
Sbjct: 139 DASAFAESNGLSFIETSALDNSNVEEAFRSILS 171
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 126 KADLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER F+ETSAL+S NVE+AF +LT
Sbjct: 135 VSVEDAKGFAEREMTFFMETSALESMNVESAFTEVLT 171
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 70 EDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 129
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+MLVG
Sbjct: 130 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 189
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 190 KSDLR---------------------------------------------------HLLA 198
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K+FAER L F+ETSAL++TNVE AF +LT
Sbjct: 199 VSTEDGKSFAEREALFFMETSALEATNVENAFAEVLT 235
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 126 KADLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER + F+ETSAL++ NVE AF +LT
Sbjct: 135 VSVEDAKAFAERESTFFMETSALEAMNVENAFTEVLT 171
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+AK FAER N F+ETSAL+S NV+ +F +LT
Sbjct: 136 VSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLT 172
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLL+RFTRNEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWLREL+DH D NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLRELKDHTDANIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 126 KADLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +++AK FAER N F+ETSAL++ NVE AF +L+
Sbjct: 135 VQSEDAKAFAERENTFFMETSALEAMNVEDAFTEVLS 171
>gi|330792766|ref|XP_003284458.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
gi|325085601|gb|EGC39005.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
Length = 217
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/217 (60%), Positives = 151/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LE+KSTIGVEFATR+IQ + KTIKAQ+
Sbjct: 6 QEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQV 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDIAK TY++VERWL ELR++AD+NI IMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIEIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLR
Sbjct: 126 KSDLR---------------------------------------------------HLRE 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V DEAK F+E++ L+FIETSALDS+NVE AFQNILT
Sbjct: 135 VSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILT 171
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 148/216 (68%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVIM+ G
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL HLRA
Sbjct: 125 --------------------------------------------------NKADLNHLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V A++A+ AE+ LSF+ETSAL++ NVE AFQ IL
Sbjct: 135 VSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTIL 170
>gi|432915693|ref|XP_004079205.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/216 (62%), Positives = 143/216 (66%), Gaps = 51/216 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAF 216
HLRAVP DEA+ FA N+ +T + + + F
Sbjct: 130 HLRAVPTDEARAFAGNNHPKKTKTPYVQAFGISALF 165
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 146/215 (67%), Gaps = 51/215 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QVD KT+KAQIWD
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQIWD 67
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVI++ G S
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVILMAGNKS 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
DL HLRAV
Sbjct: 128 ---------------------------------------------------DLNHLRAVA 136
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
++ + AER +LSF+ETSAL++TNVE AFQ ILT
Sbjct: 137 EEDGQALAERESLSFLETSALEATNVEKAFQTILT 171
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 149/223 (66%), Gaps = 53/223 (23%)
Query: 1 MGT--REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK 58
MGT ED+YDYLFKVVL GDSGVGKSNLLSRFTRN+F+ +S+STIGVEFATRSIQVD K
Sbjct: 1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60
Query: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D N V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120
Query: 119 IMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
IMLVG NK+D
Sbjct: 121 IMLVG---------------------------------------------------NKAD 129
Query: 179 LRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
L HLRA+ +E K FAER N F+ETSAL++ NVE AF +LT
Sbjct: 130 LNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLT 172
>gi|359493623|ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
Length = 715
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/217 (60%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 505 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQI 564
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D +IVIMLVG
Sbjct: 565 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVGN 624
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
LR HLRA
Sbjct: 625 KGDLR---------------------------------------------------HLRA 633
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+AK FAER N F+ETSAL+S NVE AF +LT
Sbjct: 634 VSIDDAKAFAERENTFFMETSALESMNVENAFTEVLT 670
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 144/214 (67%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYDI K T+ENV+RWLRELRDHAD NIVIM+ G S
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGNKS 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
DL HLRAV
Sbjct: 128 ---------------------------------------------------DLNHLRAVS 136
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
D+A+ AER LSF+ETSAL++ NVE AFQ IL
Sbjct: 137 TDDAQNLAEREALSFLETSALEAFNVEKAFQTIL 170
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K+FAER +L F+ETSAL++TNV+ AF +LT
Sbjct: 136 VSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLT 172
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D +IVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
LR HL A
Sbjct: 127 KGDLR---------------------------------------------------HLXA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+AK FAER N F+ETSAL+S NVE AF +LT
Sbjct: 136 VSIDDAKAFAERENTFFMETSALESMNVENAFTEVLT 172
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++YDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIM VG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER N F+ETSAL+S NVE AF +LT
Sbjct: 136 VSTEDAKAFAERENTYFMETSALESLNVENAFTEVLT 172
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 148/216 (68%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q+D KT+KAQIW
Sbjct: 136 NEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQIW 195
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI K ++++V+RWLRELR HAD NIV+M+VG
Sbjct: 196 DTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVG-- 253
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NKSDL HLR+V
Sbjct: 254 -------------------------------------------------NKSDLNHLRSV 264
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P ++ + F+E+ LSF+ETSAL++ NVE AF IL+
Sbjct: 265 PEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILS 300
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ V++K IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK+FAE +L F+ETSAL+STNVE AF +LT
Sbjct: 136 VQTEDAKSFAENESLYFMETSALESTNVENAFSEVLT 172
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d; AltName:
Full=Ras-related protein Rab11B; Short=AtRab11B;
AltName: Full=Ras-related protein SGBP; Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ V++K IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK+FAE +L F+ETSAL+STNVE AF +LT
Sbjct: 136 VQTEDAKSFAENESLYFMETSALESTNVENAFSEVLT 172
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 147/216 (68%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ K +KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVEDKVVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERW+RELRDH D NIV+MLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVMMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 126 KADLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP ++AK FAER N F+ETSAL++ NVE AF +L
Sbjct: 135 VPTEDAKAFAERQNAFFMETSALEAMNVEDAFTEVL 170
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K+FAE+ +L F+ETSAL++TNVE +F +LT
Sbjct: 136 VSTEDGKSFAEKESLYFMETSALEATNVEISFAEVLT 172
>gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548673|sp|P36412.1|RB11A_DICDI RecName: Full=Ras-related protein Rab-11A
gi|414965|gb|AAA80149.1| Rab11 [Dictyostelium discoideum]
gi|60474032|gb|EAL71969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 151/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LE+KSTIGVEFATR+IQ + KTIKAQ+
Sbjct: 7 QEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQV 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDIAK TY++VERW+ ELR++AD+NI IMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLR
Sbjct: 127 KSDLR---------------------------------------------------HLRE 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V DEAK F+E++ L+FIETSALDS+NVE AFQNILT
Sbjct: 136 VSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILT 172
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER N F+ETSAL+S NV+ AF +LT
Sbjct: 136 VATNDAKAFAERENTFFMETSALESLNVDNAFTEVLT 172
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K+FAER +L F+ETSAL++TNV+ AF +LT
Sbjct: 136 VSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLT 172
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++A +F+ER N F+ETSAL+S NVE+AF +LT
Sbjct: 136 VSTEDATSFSERENTYFMETSALESLNVESAFTEVLT 172
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 147/214 (68%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVIML G
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMLAG--- 124
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NK+DL HLR+V
Sbjct: 125 ------------------------------------------------NKTDLNHLRSVS 136
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
A++A+ AE+ LS +ETSAL+++NVE AFQ IL
Sbjct: 137 AEDAQMLAEKECLSCLETSALEASNVEKAFQTIL 170
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN+ERWL+ELRDH D NIVIM VG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIVIMFVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER N F+ETSAL+S NVE AF +L+
Sbjct: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLS 172
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 150/221 (67%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGT +++YDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRS+++ KT+
Sbjct: 1 MGTSDEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+ + +T+ENV+RWL+ELRDH D NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDANIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG + LR
Sbjct: 121 LVGNKADLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP +EA FAER N F+ETSAL+S NV+ AF +L+
Sbjct: 130 HLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLS 170
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 134/222 (60%), Positives = 148/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K
Sbjct: 1 MAYRSDEDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKL 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI + +TYENVERWL+EL+DH D NIV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRPVTYENVERWLKELKDHTDSNIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG S LR
Sbjct: 121 MLVGNKSDLR-------------------------------------------------- 130
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV ++ + F+ER L F+ETSAL+STNVE AF+ ILT
Sbjct: 131 -HLRAVSTEDGQAFSEREGLYFMETSALESTNVENAFKQILT 171
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q++ KTIKAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLV+DI K T++NV+RWLRELRDHAD NIV+M+VG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL HLR+
Sbjct: 125 --------------------------------------------------NKSDLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ F+E+ LSF+ETSAL++ NVE AF +L+
Sbjct: 135 VPEEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLS 171
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++A FAER N F+ETSAL+S NVE AF +LT
Sbjct: 136 VTTEDATAFAERENTFFMETSALESLNVENAFTEVLT 172
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 147/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VL GDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MAHRVDHEYDYLFKIVLTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G S DL
Sbjct: 121 MMAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV D+ + AER LSF+ETSAL++TN+E AFQ ILT
Sbjct: 130 SHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILT 171
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 145/215 (67%), Gaps = 51/215 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVIM+ G S
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKS 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
DL HLRAV
Sbjct: 128 ---------------------------------------------------DLSHLRAVY 136
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
D+ + AER LSF+ETSAL++TN+E AFQ ILT
Sbjct: 137 EDDGQNLAEREGLSFLETSALEATNIEKAFQTILT 171
>gi|225705282|gb|ACO08487.1| Ras-related protein Rab-11B [Oncorhynchus mykiss]
Length = 150
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 131/201 (65%), Positives = 139/201 (69%), Gaps = 51/201 (25%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRN+FNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
L G S LR
Sbjct: 121 LAGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSF 201
HLRAVP DEA+ FAE+N + +
Sbjct: 130 HLRAVPTDEARAFAEKNTILY 150
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 249 bits (635), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 148/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK++LIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MAHRVDHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G S DL
Sbjct: 121 MMAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV D+ AE++ LSF+ETSAL++TN+E AFQ ILT
Sbjct: 130 NHLRAVSEDDGGALAEKDGLSFLETSALEATNIEKAFQTILT 171
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 146/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++ K+FAER +L F+ETSAL++TNV+ AF +L
Sbjct: 136 VSTEDGKSFAERESLYFMETSALEATNVDNAFAEVL 171
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 147/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G S DL
Sbjct: 121 MMAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV D+ + AE+ LSF+ETSAL++TN+E AFQ ILT
Sbjct: 130 NHLRAVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTILT 171
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 146/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++ K+FAER +L F+ETSAL++TNV+ AF +L
Sbjct: 136 VSTEDGKSFAERESLYFMETSALEATNVDNAFAEVL 171
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 144/214 (67%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYDI K T+ENV+RWLRELRDHAD NIVIM+ G S
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGNKS 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
DL HLRAV
Sbjct: 128 ---------------------------------------------------DLNHLRAVS 136
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
D+A+ AE+ LSF+ETSAL++ NVE AFQ IL
Sbjct: 137 GDDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+ ++A FA+R N F+ETSAL+S NVE AF +LT
Sbjct: 136 ITIEDATAFAQRQNTFFMETSALESMNVENAFTEVLT 172
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 150/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q+D KT+KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLV+DI K T++NV+RWLRELRDHAD NIV+M+VG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL HLR+
Sbjct: 126 KS---------------------------------------------------DLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++++ F+E+ +LSF+ETSAL++ NVE AF +L+
Sbjct: 135 VPEEDSQAFSEKESLSFLETSALEAINVEKAFHTVLS 171
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +++ FAER N F+ETSAL+S NVE AF +LT
Sbjct: 136 VSTEDSTAFAERENTFFMETSALESMNVENAFTEVLT 172
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 150/223 (67%), Gaps = 53/223 (23%)
Query: 1 MGTR--EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK 58
MGT ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR++ VD K
Sbjct: 1 MGTSSSEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV+RWL+ELR+H D NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV 120
Query: 119 IMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
+MLVG S LR
Sbjct: 121 VMLVGNKSDLR------------------------------------------------- 131
Query: 179 LRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HL AV ++ KT+AER +L F+ETSAL++TNVE AF +LT
Sbjct: 132 --HLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLT 172
>gi|449450768|ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
gi|449520383|ref|XP_004167213.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
Length = 217
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 147/215 (68%), Gaps = 51/215 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEF+T+++QV+ KT+KAQIWD
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKTVKAQIWD 67
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYD+ K T+ENV+RWLRELRDHAD NIVI+++G S
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVIVMIGNKS 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
DL HLR+V
Sbjct: 128 ---------------------------------------------------DLSHLRSVS 136
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
D+ +T AE+ LSFIETSALD+TN++ AFQ ILT
Sbjct: 137 EDDGQTMAEKEGLSFIETSALDATNIDKAFQTILT 171
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 148/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G S DL
Sbjct: 121 MMAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+HLRAV ++ + AE+ LSF+ETSAL++ N+E AFQ ILT
Sbjct: 130 KHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILT 171
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 147/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G S DL
Sbjct: 121 MMAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV D+ +E+ LSF+ETSAL++TN+E AFQ ILT
Sbjct: 130 NHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILT 171
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 146/214 (68%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKTVKAQIWD 67
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIML G S
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRDHADSNIVIMLAGNKS 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
DL HLR+V
Sbjct: 128 ---------------------------------------------------DLNHLRSVS 136
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
A++A+T AE+ LSF+ETSAL+++NVE AFQ IL
Sbjct: 137 AEDAQTLAEKEGLSFLETSALEASNVEKAFQTIL 170
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ VD K +KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K+FAE+ +L F+ETSAL++TNVE +F +LT
Sbjct: 136 VSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLT 172
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D N VIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER + F+ETSAL+S NVE AF +LT
Sbjct: 136 VATEDAKGFAERESTFFMETSALESMNVENAFTEVLT 172
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 145/214 (67%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFKVVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 8 EYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVIM+ G S
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKS 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
DL HLRAV
Sbjct: 128 ---------------------------------------------------DLNHLRAVS 136
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
++A++ AER LSF+ETSAL++ NVE AFQ IL
Sbjct: 137 TEDAQSLAEREGLSFLETSALEAYNVEKAFQTIL 170
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 150/216 (69%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++V+ + +KAQI
Sbjct: 6 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA+GALLVYD+ K ++ENV RWL+ELRDHAD NIVIML+G
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL+HLR
Sbjct: 125 --------------------------------------------------NKTDLKHLRG 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++A+++AE+ LSFIETSAL++TNV+ AFQ IL
Sbjct: 135 VATEDAQSYAEKEGLSFIETSALEATNVDKAFQTIL 170
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 150/221 (67%), Gaps = 53/221 (23%)
Query: 2 GTR--EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
GTR E+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V+ K
Sbjct: 3 GTRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKI 62
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGA+GA+LVYD++K T++N+ RWL+ELRDHAD NI I
Sbjct: 63 IKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADANIRI 122
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NK+DL
Sbjct: 123 MLVG---------------------------------------------------NKTDL 131
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+HLRAV D+A FAE LS+IETSAL++TNVE AFQ IL
Sbjct: 132 KHLRAVATDDAHKFAEAEGLSYIETSALEATNVEEAFQLIL 172
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLL+RFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWL+EL+DH D NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 126 KADLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++AK FAER F ETSAL++ NVE AF +LT
Sbjct: 135 VPVEDAKAFAEREYTYFTETSALEAMNVEDAFTEVLT 171
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 149/216 (68%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNL SRFTRNEF LESKSTIGVEFATR+++V+ + +KAQI
Sbjct: 6 EEEYDYLFKVVLIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA+GALLVYD+ K ++ENV RWL+ELRDHAD NIVIML+G
Sbjct: 66 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL+HLR
Sbjct: 125 --------------------------------------------------NKTDLKHLRG 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++A+++AE+ LSFIETSAL++TNV+ AFQ IL
Sbjct: 135 VATEDAQSYAEKEGLSFIETSALEATNVDKAFQTIL 170
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 146/222 (65%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QVD KT
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGA LVYDI K T++NV+RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGAFLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G S DL
Sbjct: 121 MMAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV ++ AE+ LSF+ETSAL++TN+E AFQ ILT
Sbjct: 130 NHLRAVQEEDGHALAEKEGLSFLETSALEATNIEKAFQTILT 171
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +++ +FAER + F+ETSAL+S NVE+AF +LT
Sbjct: 136 VSTEDSTSFAEREHTFFMETSALESLNVESAFTEVLT 172
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/219 (57%), Positives = 152/219 (69%), Gaps = 52/219 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
R++EYDYLFKVVL+GDSGVGKSNLLSRFTRN F+LE+KSTIGVEFATRS+ ++ K IKA
Sbjct: 5 RDEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKAT 64
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAIT A
Sbjct: 65 IWDTAGQERYRAITPA-------------------------------------------- 80
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQ-NIVIMLVGNKSDLRHL 182
YYRGA+G L+VYDIAKH T++N+++WL+ELR+HAD+ NI IMLVGNK+DLRHL
Sbjct: 81 -------YYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVGNKTDLRHL 133
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP EA +A+RN++SFIETSALDSTNVE A +N+LT
Sbjct: 134 RAVPTQEAAIYADRNHMSFIETSALDSTNVEEALRNLLT 172
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D K IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H TYENVE+WL+ELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK+FAE +L F+ETSAL++TNV+ AF +LT
Sbjct: 136 VSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLT 172
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD+K +KAQI
Sbjct: 7 DDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH + NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER N F+ETSAL++ NVE AF +L+
Sbjct: 136 VSTEDAKAFAERENTFFMETSALEALNVENAFTEVLS 172
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 144/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+S+ +D K IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+TYENV RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V DEAK AER L F+ETSAL++TNVE AF LT
Sbjct: 136 VSTDEAKGLAEREGLYFMETSALEATNVENAFTEALT 172
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 147/216 (68%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVIM+ G
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL HLRA
Sbjct: 126 KS---------------------------------------------------DLNHLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V A++A+ AE+ LSF+ETSAL++ N+E AFQ+IL
Sbjct: 135 VSAEDARMLAEKEGLSFLETSALEAHNIEKAFQSIL 170
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+QVD K IKAQI
Sbjct: 11 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQI 70
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T++NV RWLRELRDH DQ+IV+MLVG
Sbjct: 71 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLVGN 130
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 131 KSDLR---------------------------------------------------HLVA 139
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+AK FAE ++ F+ETSALD+TNV+++F +LT
Sbjct: 140 VSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLT 176
>gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 200
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 131/207 (63%), Positives = 142/207 (68%), Gaps = 51/207 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
+VLIGDSGVGKSNLL R+T+NEFNLESKSTIGVEFATRSIQ D KTIKAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATRSIQFDNKTIKAQIWDTAGQDRY 60
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYDI+KH TYENV++WL+ELRDHAD +IVIMLVG S LR
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYENVDKWLKELRDHADPSIVIMLVGNKSDLR---- 116
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLR VP +EAK F
Sbjct: 117 -----------------------------------------------HLRNVPTEEAKNF 129
Query: 194 AERNNLSFIETSALDSTNVETAFQNIL 220
A+RNNLSFIETSAL STNVETAF IL
Sbjct: 130 AQRNNLSFIETSALHSTNVETAFHTIL 156
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 146/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 6 EQDYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ G
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL HLR+
Sbjct: 125 --------------------------------------------------NKADLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++ +T AE LSF+ETSAL++TNVE AFQ +L
Sbjct: 135 VAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVL 170
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR++ VD K IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV+RWL+ELR+H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ KT+AER +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VSTEDGKTYAERESLYFMETSALEATNVENAFAEVLT 172
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 145/215 (67%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYDYLFKVVLIGDSGVGKSNLLSRFT+N F+L+SKSTIGVEFATR+ QV+ KTIKAQIW
Sbjct: 14 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTTQVEGKTIKAQIW 73
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYD+ K T+ENV+RWL+ELRDHAD NIVIML+G
Sbjct: 74 DTAGQERYRAITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDHADSNIVIMLIGNK 133
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
+ LR HLR+V
Sbjct: 134 TDLR---------------------------------------------------HLRSV 142
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
D+A FAE LSFIETSALD+TNV+ AFQ +L
Sbjct: 143 ATDKAAGFAEWEGLSFIETSALDATNVDKAFQTVL 177
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD+K +KAQI
Sbjct: 7 DDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH + NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER N F+ETSAL++ NVE AF +L+
Sbjct: 136 VSTEDAKAFAERENTFFMETSALEALNVENAFTEVLS 172
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLL+RFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWL+EL+DH D NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 126 KADLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER F+ETSAL+S NVE AF +LT
Sbjct: 135 VSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLT 171
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI+VD+K +KAQI
Sbjct: 7 DEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVLKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN+ERWL+ELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENMERWLKELRDHTDANIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +EA FAER F+ETSAL+S NVE AF +LT
Sbjct: 136 VSTEEATAFAEREKTFFMETSALESMNVENAFTEVLT 172
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 145/214 (67%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFKVVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 8 EYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVIM+ G S
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKS 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
DL HLRAV
Sbjct: 128 ---------------------------------------------------DLNHLRAVS 136
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
++A++ AER LSF+ETSAL++ NV+ AFQ IL
Sbjct: 137 TEDAQSLAEREGLSFLETSALEAYNVDKAFQTIL 170
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/221 (58%), Positives = 143/221 (64%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I+VD TI
Sbjct: 1 MSKDNDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEVDTNTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K +YE+VE+WL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYEDVEKWLKELRDHADANIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
L+G L +
Sbjct: 121 LIGNKCDL---------------------------------------------------K 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR V ++A+ FA LSF ETSAL+STNVE AF ILT
Sbjct: 130 HLRCVQTEDARLFAANEGLSFTETSALESTNVELAFHQILT 170
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q++ KT+KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLV+DI K T++NV+RWLRELRDHAD NIV+M+VG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL HLR+
Sbjct: 126 KS---------------------------------------------------DLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++++ F+E+ LSF+ETSAL++ NVE AF +L+
Sbjct: 135 VPEEDSQAFSEKEGLSFLETSALEAINVEKAFHTVLS 171
>gi|294943805|ref|XP_002783965.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239896947|gb|EER15761.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 146/218 (66%), Gaps = 51/218 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T E++YDYLFKVVLIGDSGVGKSN+LSRFTR EFNLES+STIGVEFAT+S+++ K +KA
Sbjct: 7 TAEEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKA 66
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++EN RWL+ELR+HAD +IV+MLV
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLV 126
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NK DL HL
Sbjct: 127 G---------------------------------------------------NKCDLSHL 135
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
RAV DEAK F N+L FIETSAL++TNVE AFQ IL
Sbjct: 136 RAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEIL 173
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVE WL+ELR+H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK+FAE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLT 172
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 145/215 (67%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+Y YLFKVVLIGDSGVGKSNLLSRF RNEFN +SKSTIGVEFATRSI+ D KTIK+QIW
Sbjct: 4 DDYHYLFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEFDGKTIKSQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI++ T+E+VERWL+ELRDHAD +IVIMLVG
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISQQKTFESVERWLKELRDHADASIVIMLVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S L + LRAV
Sbjct: 124 SDL---------------------------------------------------KSLRAV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
P +EAK FA RN L F+ETSALD NVETAFQ+IL
Sbjct: 133 PTEEAKEFATRNQLLFMETSALDGGNVETAFQDIL 167
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR++ VD K IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV+RWL+EL++H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K++AER +L FIETSAL++ NVE AF +LT
Sbjct: 136 VPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLT 172
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+QVD K IKAQI
Sbjct: 11 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQI 70
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T++NV RWLRELRDH DQ+IV+MLVG
Sbjct: 71 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRTTFDNVGRWLRELRDHTDQSIVVMLVGN 130
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 131 KSDLR---------------------------------------------------HLVA 139
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+AK FAE ++ F+ETSALD+TNV+++F +LT
Sbjct: 140 VSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLT 176
>gi|210075737|ref|XP_502830.2| YALI0D14630p [Yarrowia lipolytica]
gi|199425807|emb|CAG81018.2| YALI0D14630p [Yarrowia lipolytica CLIB122]
Length = 212
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 146/216 (67%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYD+LFKVV+IGDSGVGK+N+L RFTR+EFNL+SKSTIGVEFATR++ +D K IKAQIW
Sbjct: 3 DEYDFLFKVVMIGDSGVGKTNILGRFTRDEFNLDSKSTIGVEFATRTVNIDNKIIKAQIW 62
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALL+YD+ +Y+N+ RWL+EL+DHAD NIV+MLVG
Sbjct: 63 DTAGQERYRAITSAYYRGAVGALLLYDVTSTQSYKNISRWLQELQDHADSNIVLMLVG-- 120
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL+HLRAV
Sbjct: 121 -------------------------------------------------NKCDLKHLRAV 131
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P +EAK FA +N L FIETSALD T+V AF+NILT
Sbjct: 132 PTEEAKQFASQNKLLFIETSALDGTDVALAFRNILT 167
>gi|226502406|ref|NP_001146923.1| LOC100280532 [Zea mays]
gi|195605270|gb|ACG24465.1| ras-related protein Rab11C [Zea mays]
Length = 216
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 147/216 (68%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+EYDYLFK+VLIGDSGVGKSN+ SRFTRNEF LESKSTIGVEFATR++Q+D KT+KAQIW
Sbjct: 7 NEYDYLFKIVLIGDSGVGKSNIPSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQIW 66
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI K ++++V+RWLRELR HAD NIV+M+VG
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVG-- 124
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NKSDL HLR+V
Sbjct: 125 -------------------------------------------------NKSDLNHLRSV 135
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P ++ + F+E+ LSF+ETSAL++ NVE AF IL+
Sbjct: 136 PEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILS 171
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 148/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T+ENV RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G S DL
Sbjct: 121 MMAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR+V ++ ++ AE+ LSF+ETSAL++TN+E AFQ IL+
Sbjct: 130 NHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILS 171
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH + NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++A FAER F+ETSAL+S NVE AF +LT
Sbjct: 136 VTTEDATAFAEREKTFFMETSALESLNVENAFTEVLT 172
>gi|242006346|ref|XP_002424012.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507304|gb|EEB11274.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 130
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/123 (96%), Positives = 121/123 (98%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M +R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MASRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Query: 121 LVG 123
LVG
Sbjct: 121 LVG 123
>gi|147802502|emb|CAN73117.1| hypothetical protein VITISV_002485 [Vitis vinifera]
Length = 215
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 143/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFK+VLIGDSGVGKSN+LSRFTRNE LESKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYDI K T+ENV+RWLRELRDHAD NIVIM+ G S
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGNKS 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
DL HLRAV
Sbjct: 128 ---------------------------------------------------DLNHLRAVS 136
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
D+A+ AE+ LSF+ETSAL++ NVE AFQ IL
Sbjct: 137 GDDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
>gi|294874898|ref|XP_002767142.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239868591|gb|EEQ99859.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 146/218 (66%), Gaps = 51/218 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T E++YDYLFKVVLIGDSGVGKSN+LSRFTR EFNLES+STIGVEFAT+S+++ K +KA
Sbjct: 7 TAEEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKA 66
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++EN RWL+ELR+HAD +IV+MLV
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLV 126
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NK DL HL
Sbjct: 127 G---------------------------------------------------NKCDLSHL 135
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
RAV DEAK F N+L FIETSAL++TNVE AFQ IL
Sbjct: 136 RAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEIL 173
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T+ENV RWLRELRDHAD NIVIM+ G
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVPRWLRELRDHADSNIVIMMAGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL HLR+
Sbjct: 126 KS---------------------------------------------------DLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+ ++ ++ AE+ LSF+ETSAL+++N+E AFQ+IL+
Sbjct: 135 ISDEDGRSLAEKEGLSFLETSALEASNIEKAFQSILS 171
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 146/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E +YDYLFK+VLIGDSGVGK+N+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 6 EQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ G
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL HLR+
Sbjct: 125 --------------------------------------------------NKADLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++ +T AE LSF+ETSAL++TNVE AFQ +L
Sbjct: 135 VAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVL 170
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDY FKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DDDYDYPFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDTNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +++ FAER N F+ETSAL+S NVE AF +LT
Sbjct: 136 VSTEDSTAFAERENTFFMETSALESLNVENAFTEVLT 172
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLL+RFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWL+EL+DH D NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 126 KADLR---------------------------------------------------HLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER F+ETSAL++ NVE AF +LT
Sbjct: 135 VSVEDAKAFAEREYTFFMETSALEAMNVEDAFTEVLT 171
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 146/214 (68%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+ ++KSTIGVEFATRSI V+ K +KAQIWDT
Sbjct: 7 YDYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILKAQIWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAIT+AYYRGAVGALLVYDI+K +YENV+RWL+ELRDHAD NIVIMLVG S
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDISKRGSYENVQRWLKELRDHADSNIVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +HLRAVP
Sbjct: 127 L---------------------------------------------------KHLRAVPT 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEA+ FA N LSFIETSALD++NV++AF+ LT
Sbjct: 136 DEARAFAAENGLSFIETSALDASNVDSAFETNLT 169
>gi|388506820|gb|AFK41476.1| unknown [Lotus japonicus]
Length = 216
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 145/214 (67%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVY + K T+ENV+RWLRELRDHAD NIVIM+ G S
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYGMTKRQTFENVQRWLRELRDHADANIVIMMAGNKS 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
DL HLRAV
Sbjct: 128 ---------------------------------------------------DLNHLRAVS 136
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+++A+ AE+ +LSF+ETSAL++ NVE AFQ IL
Sbjct: 137 SEDAQNLAEKESLSFLETSALEALNVEKAFQTIL 170
>gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum]
gi|738938|prf||2001457F GTP-binding protein
Length = 218
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+S+ +D K IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+EN RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K+FAER +L F+ETSAL++TNVE AF +L+
Sbjct: 136 VPTEDGKSFAERESLYFMETSALEATNVENAFSEVLS 172
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR+++VD K IKAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+ENV+RWL+EL++H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLLA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K++AE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLT 172
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+S+ VD K IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+EN RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K+FAER +L F+ETSAL++TNVE AF +L+
Sbjct: 136 VPTEDGKSFAERESLYFMETSALEATNVENAFTEVLS 172
>gi|295658933|ref|XP_002790026.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282109|gb|EEH37675.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 220
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/226 (59%), Positives = 146/226 (64%), Gaps = 61/226 (26%)
Query: 6 DEYDYLFK----------VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 55
DEYD+LFK +VLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQV
Sbjct: 4 DEYDFLFKGIYLPGPVLRMVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQV 63
Query: 56 DQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQ 115
D KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYD K T+ N ERWL+ELR+HAD+
Sbjct: 64 DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADK 123
Query: 116 NIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 175
NIVIMLVG N
Sbjct: 124 NIVIMLVG---------------------------------------------------N 132
Query: 176 KSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
K D +H+R V +A FA+ LSFIETSALD+TNVE AFQNILT
Sbjct: 133 KIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILT 178
>gi|388493146|gb|AFK34639.1| unknown [Medicago truncatula]
Length = 218
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+S+ VD K IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+EN RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K+FAER +L F+ETSAL++TNVE AF +L+
Sbjct: 136 VPTEDGKSFAERESLYFMETSALEATNVENAFTEVLS 172
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/221 (58%), Positives = 149/221 (67%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQ-KT 59
M +++ YDYL+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ +D+ K
Sbjct: 1 MAAKDEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K ++ENVERWL+ELRDHAD NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
+LVG S DL
Sbjct: 121 LLVGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+HLRAV +EA FA R +L+FIETSALD+TNVE AF IL
Sbjct: 130 KHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQIL 170
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+QVD K IKAQI
Sbjct: 11 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQI 70
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T++NV RWLRELRDH DQ+IV+ML+G
Sbjct: 71 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLIGN 130
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 131 KSDLR---------------------------------------------------HLVA 139
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+AK +AE ++ F+ETSALD+TNV+ AF +LT
Sbjct: 140 VSTDDAKEYAEAESMYFMETSALDATNVDNAFSEVLT 176
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR+++VD K +KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+ENV+RWL+EL++H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLLA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K++AE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLT 172
>gi|358248612|ref|NP_001239655.1| uncharacterized protein LOC100810759 [Glycine max]
gi|255646959|gb|ACU23949.1| unknown [Glycine max]
Length = 217
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR++ VD K IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV+RWL+ELR+H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K++AE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLT 172
>gi|294895479|ref|XP_002775190.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239881188|gb|EER07006.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 146/218 (66%), Gaps = 51/218 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T E++YDYLFKVVLIGDSGVGKSN+LSRFTR EFNLES+STIGVEFAT+S+++ K +KA
Sbjct: 7 TAEEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKA 66
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++EN RWL+ELR+HAD +IV+MLV
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLV 126
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NK DL HL
Sbjct: 127 G---------------------------------------------------NKCDLSHL 135
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
RAV DEAK F N+L FIETSAL++TNVE AFQ IL
Sbjct: 136 RAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEIL 173
>gi|15232652|ref|NP_190267.1| Ras-related protein RABA2c [Arabidopsis thaliana]
gi|297819266|ref|XP_002877516.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|3915842|sp|Q96283.4|RAA2C_ARATH RecName: Full=Ras-related protein RABA2c; Short=AtRABA2c; AltName:
Full=Ras-related protein Rab11A; Short=AtRab11A
gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana]
gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana]
gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|297323354|gb|EFH53775.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|332644688|gb|AEE78209.1| Ras-related protein RABA2c [Arabidopsis thaliana]
Length = 217
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 144/216 (66%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+ QV+ KTIKAQI
Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ G
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL HLR+
Sbjct: 126 KS---------------------------------------------------DLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++ ++ AE+ LSF+ETSAL++TNVE AFQ IL
Sbjct: 135 VAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTIL 170
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/221 (58%), Positives = 149/221 (67%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQ-KT 59
M +++ YDYL+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ +D+ K
Sbjct: 1 MAAKDEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K ++ENVERWL+ELRDHAD NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
+LVG S DL
Sbjct: 121 LLVGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+HLRAV +EA FA R +L+FIETSALD+TNVE AF IL
Sbjct: 130 KHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQIL 170
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 146/216 (67%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q+D KT+KAQIW
Sbjct: 7 NEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQIW 66
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYDI K ++++V+RWLRELR HAD NIV+M+VG
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGNK 126
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S DL HLR+V
Sbjct: 127 S---------------------------------------------------DLNHLRSV 135
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P ++ + F+E+ LSF+ETSAL++ NVE AF IL+
Sbjct: 136 PEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILS 171
>gi|351705520|gb|EHB08439.1| Ras-related protein Rab-11A, partial [Heterocephalus glaber]
Length = 207
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 141/212 (66%), Gaps = 51/212 (24%)
Query: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
+LFKVVLIG SG G+SNLLSRF RNEFNL+SKST G++FATRSIQVD KTIKAQIWDTAG
Sbjct: 1 HLFKVVLIGHSGAGESNLLSRFIRNEFNLDSKSTSGIQFATRSIQVDGKTIKAQIWDTAG 60
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLR 129
QER RA TSAYYR A+GALLV+DIAKHLTYENVERWL+E RDHAD NIVIMLV
Sbjct: 61 QERCRATTSAYYREALGALLVFDIAKHLTYENVERWLKEPRDHADSNIVIMLV------- 113
Query: 130 RYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADE 189
NKSDL HLRAVP DE
Sbjct: 114 --------------------------------------------RNKSDLCHLRAVPTDE 129
Query: 190 AKTFAERNNLSFIETSALDSTNVETAFQNILT 221
A+ FAE+N L FIE+SAL TNVE AFQ ILT
Sbjct: 130 ARAFAEKNGLPFIESSALHWTNVEAAFQTILT 161
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 148/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F+L+SKSTIGVEFAT+S+Q++ KT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K +++NV RWLRELRDHAD +IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+VG NKSDL
Sbjct: 121 MMVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV DE K AE+ L F+ETSA+++ NVE AFQ I+T
Sbjct: 130 IHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIIT 171
>gi|351722661|ref|NP_001235972.1| small GTP-binding protein [Glycine max]
gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max]
Length = 218
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+S+ +D K IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+EN RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K+FAE+ +L F+ETSAL++TNVE AF +L+
Sbjct: 136 VPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLS 172
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR+ +VD K +KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDGKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+ENV+RWL+EL++H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLLA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K++AE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLT 172
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVL GDSGVGKSNLLSRFTRN+F+ +S++TIGVEFATRSIQ D K +KAQI
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+ +EAK FAER N F+ETSAL++ NV+ AF +LT
Sbjct: 136 ISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLT 172
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVL GDSGVGKSNLLSRFTRN+F+ +S++TIGVEFATRSIQ D K +KAQI
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+ +EAK FAER N F+ETSAL++ NV+ AF +LT
Sbjct: 136 ISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLT 172
>gi|1707014|gb|AAC69136.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 130/224 (58%), Positives = 148/224 (66%), Gaps = 54/224 (24%)
Query: 1 MGT--REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATR-SIQVDQ 57
MGT ED+YDYLFKVVL GDSGVGKSNLLSRFTRN+F+ +S+STIGVEFATR IQVD
Sbjct: 1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDD 60
Query: 58 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNI 117
K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D N
Sbjct: 61 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANT 120
Query: 118 VIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKS 177
VIMLVG NK+
Sbjct: 121 VIMLVG---------------------------------------------------NKA 129
Query: 178 DLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DL HLRA+ +E K FAER N F+ETSAL++ NVE AF +LT
Sbjct: 130 DLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLT 173
>gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum]
gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738937|prf||2001457E GTP-binding protein
gi|1098295|prf||2115367C small GTP-binding protein
Length = 217
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR++ VD K IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV+RWL+ELR+H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HL A
Sbjct: 127 KADLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K++AE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLT 172
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 146/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V+ K IKAQI
Sbjct: 7 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA+GA+LVYD++K T+EN+ RWL+ELRDHAD NI IMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNIRIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KTDLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V D+A++FAE LS+IETSAL++TNVE AFQ IL
Sbjct: 136 VATDDAQSFAEAEGLSYIETSALEATNVEEAFQLIL 171
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR++ VD K IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV+RWL+ELR+H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HL A
Sbjct: 127 KADLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K++AE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLT 172
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 126/213 (59%), Positives = 144/213 (67%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI+VD K +KAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 60
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIV+MLVG + L
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 120
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
R HLRAV +
Sbjct: 121 R---------------------------------------------------HLRAVSTE 129
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
++ FAER N F+ETSAL+S NVE+AF +LT
Sbjct: 130 DSTAFAERENTFFMETSALESLNVESAFTEVLT 162
>gi|449521271|ref|XP_004167653.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR++ VD K IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQ RYRAITSAYYRGAVGALLVYD+ +H T+ENV+RWL+EL++H D NIV+MLVG
Sbjct: 67 WDTAGQGRYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K++AER +L FIETSAL++ NVE AF +LT
Sbjct: 136 VPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLT 172
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LE+KSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWL+ELR H D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++A+ FAER F+ETSAL+S NVE +F +LT
Sbjct: 136 VSTEDAQAFAERERTYFMETSALESFNVENSFTEVLT 172
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+++ VD K +KAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+EN RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K+FAER +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VPTEDGKSFAERESLYFMETSALEATNVENAFTEVLT 172
>gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum]
Length = 215
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 147/221 (66%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG ++EYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRS+++ K +
Sbjct: 1 MGAADEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD +H+T+ENVERWL+ELRDH D +VIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG + LR
Sbjct: 121 LVGNKTDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HL AV +EA FAE+ N+ F+ETSAL+S NV++AF +LT
Sbjct: 130 HLCAVSTEEATAFAEKENIYFMETSALESMNVDSAFVEVLT 170
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/218 (56%), Positives = 147/218 (67%), Gaps = 51/218 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T ++YDYLFKVVLIGDSGVGKSN+LSRFTR EFNLES+STIGVEFAT+S+++ +K +KA
Sbjct: 10 TEREDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGEKVVKA 69
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGALLVYDI+K +++N RWL+ELR+HAD +IV+MLV
Sbjct: 70 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFDNAARWLKELREHADSDIVVMLV 129
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NK DL HL
Sbjct: 130 G---------------------------------------------------NKCDLSHL 138
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
RA+ +EA+ F N+L FIETSAL++TNVE AFQNIL
Sbjct: 139 RAIEEEEAEKFCSDNDLLFIETSALEATNVEEAFQNIL 176
>gi|348513149|ref|XP_003444105.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 210
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 126/222 (56%), Positives = 151/222 (68%), Gaps = 52/222 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ +D Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TR++++D TI
Sbjct: 1 MGS-DDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFAHDSRTTIGVEFSTRTVRIDNLTI 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDI+KHLTYE+ ERWL+EL DHAD +IV+M
Sbjct: 60 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NKSDL
Sbjct: 120 LVG---------------------------------------------------NKSDLE 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+LR VP DEA+ FAE+ L F+ETSALDSTNVE AF +LTA
Sbjct: 129 NLRTVPTDEARDFAEKKGLMFMETSALDSTNVEAAFSEVLTA 170
>gi|358343344|ref|XP_003635764.1| Ras-related protein Rab11B [Medicago truncatula]
gi|355501699|gb|AES82902.1| Ras-related protein Rab11B [Medicago truncatula]
gi|388505920|gb|AFK41026.1| unknown [Medicago truncatula]
Length = 215
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG ++EYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRS+++ K +
Sbjct: 1 MGAVDEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD +H+T+ENVERWL+ELRDH D +VIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG + L +
Sbjct: 121 LVGNKADL---------------------------------------------------K 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HL+AV +EA TFAE+ N+ F+ETSAL+S NV+ AF +LT
Sbjct: 130 HLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLT 170
>gi|255644368|gb|ACU22689.1| unknown [Glycine max]
Length = 193
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR++ VD K IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV+RWL+ELR+H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K++AE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLT 172
>gi|327357374|gb|EGE86231.1| Rab1a [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 129/208 (62%), Positives = 139/208 (66%), Gaps = 51/208 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIWDTAGQERY
Sbjct: 11 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 70
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLVYD K T+ N ERWL+ELR+HAD+NIVIMLVG
Sbjct: 71 RAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVG---------- 120
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
NK D +H+RA+ D+ F
Sbjct: 121 -----------------------------------------NKIDQKHVRAIKTDQGAEF 139
Query: 194 AERNNLSFIETSALDSTNVETAFQNILT 221
AE LSFIETSALD+TNVE AFQNILT
Sbjct: 140 AETRKLSFIETSALDATNVELAFQNILT 167
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 147/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F+L+SKSTIGVEFAT+S+Q+D KT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAV ALLVYDI K +++NV RWLRELRDHAD +IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+VG NKSDL
Sbjct: 121 MMVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRA+ DE K AE+ L F+ETSA+++ NVE AFQ I+T
Sbjct: 130 IHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIIT 171
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K IKAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + +T+ENVERWL+EL+DH D NIV+MLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDVTRLVTFENVERWLKELKDHTDSNIVVMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLR
Sbjct: 126 KSDLR---------------------------------------------------HLRC 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ + ++E+ L F+ETSAL+S NVE +F+ ILT
Sbjct: 135 VSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILT 171
>gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa Japonica Group]
gi|446772|prf||1912297A rgp2 gene
Length = 217
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 148/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R D EY YLFK+VLIGD+GVGKSN+LSRFTRN F+L+SKSTIGVEFAT+S+Q++ KT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K +++NV RWLRELRDHAD +IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+VG NKSDL
Sbjct: 121 MMVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV DE K AE+ L F+ETSA+++ NVE AFQ I+T
Sbjct: 130 IHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIIT 171
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 147/221 (66%), Gaps = 52/221 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F+L+SKSTIGVEFAT+S+Q++ KT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K ++ENV RWLRELRDHAD +IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADSSIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+VG NKSDL
Sbjct: 121 MMVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
HLR+V D+ K AE+ L F+ETSA+++ NVE AFQ I+
Sbjct: 130 THLRSVSEDQGKALAEKEGLFFLETSAMEAVNVEEAFQTII 170
>gi|255644522|gb|ACU22764.1| unknown [Glycine max]
Length = 195
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+S+ +D K IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+EN RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K+FAE+ +L F+ETSAL++TNVE AF +L+
Sbjct: 136 VPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLS 172
>gi|351722751|ref|NP_001236487.1| uncharacterized protein LOC100499822 [Glycine max]
gi|255626919|gb|ACU13804.1| unknown [Glycine max]
Length = 218
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 144/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+V IGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+S+ +D K IKAQI
Sbjct: 7 DDEYDYLFKLVFIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLDIDAKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+EN RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K+FAE+ +L F+ETSAL++TNVE AF +L+
Sbjct: 136 VPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLS 172
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 144/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K IKAQI
Sbjct: 6 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+ENVERWL+EL+DH D NIV+MLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDVTRLATFENVERWLKELKDHTDSNIVVMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLR
Sbjct: 126 KSDLR---------------------------------------------------HLRC 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ + ++E+ L F+ETSAL+S NVE +F+ ILT
Sbjct: 135 VSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILT 171
>gi|242087345|ref|XP_002439505.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
gi|241944790|gb|EES17935.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
Length = 217
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 146/222 (65%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F+L+SKSTIGVEFAT+S+Q+D KT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K ++ENV RWLRELRDHAD +IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVHRWLRELRDHADSSIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+VG S DL
Sbjct: 121 MMVGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRA+ DE K AE+ L F+ETSA+++ NVE AFQ I+T
Sbjct: 130 IHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIIT 171
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFKVVLIGDSGVGKSNLLS FT+NEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVE WL+ELR+H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK+FAE+ +L F+ETSA ++TNVE AF +LT
Sbjct: 136 VQTEDAKSFAEKESLYFMETSAFEATNVENAFAEVLT 172
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/218 (56%), Positives = 147/218 (67%), Gaps = 51/218 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
R D YDYL+K+VLIGDSGVGKS+LLSRFTRNEF++ESKSTIGVEFATRSIQV+ K IKAQ
Sbjct: 5 RYDHYDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQ 64
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
+WDTAGQERYRAITSAYYRGAVGA+LVYD+ K T+++VERWL E+R+HAD IV+MLVG
Sbjct: 65 VWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVG 124
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
NK DL+HLR
Sbjct: 125 ---------------------------------------------------NKCDLKHLR 133
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
AV +D+AK + + + L+FIE SALD+TNVE AFQ +T
Sbjct: 134 AVASDDAKKYGDEHGLAFIEASALDATNVEEAFQQTIT 171
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
Length = 214
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 143/221 (64%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M D+YDYLFKVVL+GDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I++ K I
Sbjct: 1 MSAEADDYDYLFKVVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQNKII 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ T+ NVE+WL ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTNKDTFGNVEKWLSELRDHADANIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK DL
Sbjct: 121 LVG---------------------------------------------------NKCDLA 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LR + A +A+ FA+ +L FIETSALD+TNVETAF N L+
Sbjct: 130 QLRVIQAVKAQQFADTEDLIFIETSALDATNVETAFINALS 170
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR++ VD K IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDSKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+ENV+RWL+ELR+H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRQATFENVDRWLKELRNHTDANIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K++AE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLT 172
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 144/215 (66%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYDYLFKVVLIGDSGVGKSNLLSRFT+N F L+SKSTIGVEFATR++QV+ K IKAQIW
Sbjct: 13 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVENKIIKAQIW 72
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYD+ K +T+ENV+RWL+ELRDHAD NIV+ML+G
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
+ LR HLR+V
Sbjct: 133 TDLR---------------------------------------------------HLRSV 141
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
++A +FAE L FIETSALD+TNVE AF +L
Sbjct: 142 AVEDAASFAESEGLFFIETSALDATNVEKAFHTVL 176
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 145/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V+ K IKAQI
Sbjct: 7 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA+GA+LVYD++K T+EN+ RWL+ELRDHAD N IMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNTRIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KTDLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V D+A++FAE LS+IETSAL++TNVE AFQ IL
Sbjct: 136 VATDDARSFAEAEGLSYIETSALEATNVEEAFQLIL 171
>gi|226510193|ref|NP_001148694.1| LOC100282310 [Zea mays]
gi|194698036|gb|ACF83102.1| unknown [Zea mays]
gi|195621456|gb|ACG32558.1| ras-related protein RGP2 [Zea mays]
gi|413944911|gb|AFW77560.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/222 (57%), Positives = 146/222 (65%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F+L+SKSTIGVEFAT+S+Q+D KT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K +++NV RWLRELRDHAD +IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+VG S DL
Sbjct: 121 MMVGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRA+ DE K AE+ L F+ETSA+++ NVE AFQ I+T
Sbjct: 130 IHLRAISEDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMT 171
>gi|358333720|dbj|GAA52200.1| Ras-related protein Rab-11B, partial [Clonorchis sinensis]
Length = 546
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 137/206 (66%), Gaps = 51/206 (24%)
Query: 15 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYR 74
VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRS+Q KTIKAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQFGGKTIKAQIWDTAGQERYR 60
Query: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRG 134
AITSAYYRGAVGALLVYDI+KH TYENV +WL ELRDH+DQ+IV+ML+G
Sbjct: 61 AITSAYYRGAVGALLVYDISKHSTYENVTQWLHELRDHSDQDIVVMLIG----------- 109
Query: 135 AVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFA 194
NK DLRHLR VP DEA+ FA
Sbjct: 110 ----------------------------------------NKCDLRHLRMVPTDEAREFA 129
Query: 195 ERNNLSFIETSALDSTNVETAFQNIL 220
R L F ETSALD+TNV+ AF +L
Sbjct: 130 MREKLFFTETSALDATNVDEAFVQVL 155
>gi|221061061|ref|XP_002262100.1| small GTPase Rab11 [Plasmodium knowlesi strain H]
gi|193811250|emb|CAQ41978.1| small GTPase Rab11, putative [Plasmodium knowlesi strain H]
Length = 216
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 148/221 (66%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKT 59
M +ED YDYLFK+VLIGDSGVGKSNLLSRFTR+EFNLESKSTIGVEFAT+SIQ+ + K
Sbjct: 1 MSMKEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKI 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K ++EN+E+WL+ELRD+AD NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
+LVG S DL
Sbjct: 121 LLVGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+HLR + +EA FA++ L+FIETSAL++TNVE AF +L
Sbjct: 130 KHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLL 170
>gi|182890006|gb|AAI65926.1| Rab25 protein [Danio rerio]
Length = 210
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 152/222 (68%), Gaps = 52/222 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGT + Y+++FKVVLIG+SGVGKSNLLSRFT+NEFN +S++TIGVEF+TRS+QVD TI
Sbjct: 1 MGT-DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITI 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDI KHLTYE+VERWL+EL DHAD +IV+M
Sbjct: 60 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK+DL
Sbjct: 120 LVG---------------------------------------------------NKNDLA 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+R VP +EAK FA+ N+L F+ETSAL+STNVE+AF +LTA
Sbjct: 129 TVRTVPTEEAKDFADANDLLFMETSALESTNVESAFLEVLTA 170
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 144/216 (66%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DEYDYLFK+VLIGDSGVGKSNLLSRFTRN+FNLESKSTIGVEFAT+S+++D K IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVIKAQIW 67
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAITSAYYRGAVGALLVYD+ + T+EN RWL+ELRDH D N+V+ML+G
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVVMLIGNK 127
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
LR HL V
Sbjct: 128 CDLR---------------------------------------------------HLILV 136
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P ++ K+FAER +L F+ETSALD+TNVE+AF +L+
Sbjct: 137 PTEDGKSFAERESLYFMETSALDATNVESAFTEVLS 172
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 144/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+S+ +D K IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAIT AYYRGAVGALLVYD+ +H+T+ENV RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITIAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPNIVVMLLGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +EAK+ AER L F+ETSAL++TNVE AF LT
Sbjct: 136 VSTEEAKSLAEREALYFMETSALEATNVENAFTEALT 172
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 145/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V+ K IKAQI
Sbjct: 16 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQI 75
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA+GA+LVYD++K T+EN+ RWL+ELRDHAD NI IMLVG
Sbjct: 76 WDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADANIRIMLVGN 135
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ L +HLRA
Sbjct: 136 KTDL---------------------------------------------------KHLRA 144
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V D+ ++FAE LS+IETSAL++TNVE AFQ IL
Sbjct: 145 VATDDGQSFAEAEGLSYIETSALEATNVEEAFQLIL 180
>gi|388497686|gb|AFK36909.1| unknown [Lotus japonicus]
Length = 217
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR++ VD K IK+QI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKSQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA+GALLVYD+ +H T+ENV+RWL+ELR+H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGALGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K++ E+ +L FIETSAL+++NVE AF +LT
Sbjct: 136 VSTEDGKSYTEKESLYFIETSALEASNVENAFAEVLT 172
>gi|238007236|gb|ACR34653.1| unknown [Zea mays]
Length = 217
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 127/222 (57%), Positives = 146/222 (65%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F+L+SKSTIGVEFAT+S+Q+D KT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAV ALLVYDI K +++NV RWLRELRDHAD +IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+VG NKSDL
Sbjct: 121 MMVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRA+ DE K AE+ L F+ET A+++ NVE AFQ I+T
Sbjct: 130 IHLRAISEDEGKALAEKEGLFFLETLAMEAINVEEAFQTIIT 171
>gi|94733749|emb|CAK11462.1| novel protein similar to vertebrate RAB25, member RAS oncogene
family (RAB25) [Danio rerio]
Length = 210
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 151/222 (68%), Gaps = 52/222 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGT + Y+++FKVVLIG+SGVGKSNLLSRFT+NEFN +S++TIGVEF+TRS+QVD TI
Sbjct: 1 MGT-DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITI 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDI KHLTYE+VERWL+EL DHAD +IV+M
Sbjct: 60 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK+DL
Sbjct: 120 LVG---------------------------------------------------NKNDLA 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+R VP +EAK FA+ N L F+ETSAL+STNVE+AF +LTA
Sbjct: 129 TVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTA 170
>gi|56693355|ref|NP_001008641.1| ras-related protein Rab-25 [Danio rerio]
gi|56270511|gb|AAH86715.1| RAB25, member RAS oncogene family [Danio rerio]
Length = 210
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 151/222 (68%), Gaps = 52/222 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGT + Y+++FKVVLIG+SGVGKSNLLSRFT+NEFN +S++TIGVEF+TRS+QVD TI
Sbjct: 1 MGT-DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITI 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDI KHLTYE+VERWL+EL DHAD +IV+M
Sbjct: 60 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK+DL
Sbjct: 120 LVG---------------------------------------------------NKNDLA 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+R VP +EAK FA+ N L F+ETSAL+STNVE+AF +LTA
Sbjct: 129 TVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTA 170
>gi|156102877|ref|XP_001617131.1| small GTPase rab11 [Plasmodium vivax Sal-1]
gi|148806005|gb|EDL47404.1| small GTPase rab11, putative [Plasmodium vivax]
Length = 230
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 148/221 (66%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKT 59
M +ED YDYLFK+VLIGDSGVGKSNLLSRFTR+EFNLESKSTIGVEFAT+SIQ+ + K
Sbjct: 1 MSMKEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKI 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K ++EN+E+WL+ELRD+AD NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
+LVG S DL
Sbjct: 121 LLVGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+HLR + +EA FA++ L+FIETSAL++TNVE AF +L
Sbjct: 130 KHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLL 170
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a; AltName:
Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 143/217 (65%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT++ +V+ K +KAQI
Sbjct: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALL+YD+ +H T+EN RWLRELR H D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
LR HL A
Sbjct: 127 KCDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +EAK FAER +L F+ETSALD+TNVE AF +LT
Sbjct: 136 VKTEEAKAFAERESLYFMETSALDATNVENAFTEVLT 172
>gi|389586140|dbj|GAB68869.1| small GTPase rab11 [Plasmodium cynomolgi strain B]
Length = 216
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 148/221 (66%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKT 59
M +ED YDYLFK+VLIGDSGVGKSNLLSRFTR+EFNLESKSTIGVEFAT+SIQ+ + K
Sbjct: 1 MSMKEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKI 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K ++EN+E+WL+ELRD+AD NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
+LVG S DL
Sbjct: 121 LLVGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+HLR + +EA FA++ L+FIETSAL++TNVE AF +L
Sbjct: 130 KHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLL 170
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 144/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT++ +V+ K +KAQI
Sbjct: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALL+YD+ +H T+EN RWLRELR H D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
LR HL A
Sbjct: 127 KCDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +EAK FAER +L F+ETSALD+TNVE+AF +L+
Sbjct: 136 VKTEEAKAFAERESLYFMETSALDATNVESAFTEVLS 172
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 149/221 (67%), Gaps = 53/221 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T +++YDYL+K+VLIGDSGVGKSNLLSRFTRNEFNLE+KSTIGVEFATR+I + KTIKA
Sbjct: 6 TGQEDYDYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIVTEGKTIKA 65
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQN--IVIM 120
QIWDTAGQERYRAITSAYYRGAVGALLVYDIAK TY++VERWL ELR++AD+N I IM
Sbjct: 66 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNFDIEIM 125
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 126 LVGNKSDLR--------------------------------------------------- 134
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR V DEAK FAE++ L FIETSALDS+NV+ AFQ ILT
Sbjct: 135 HLREVSTDEAKEFAEKHKLLFIETSALDSSNVDVAFQTILT 175
>gi|346465357|gb|AEO32523.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 141/212 (66%), Gaps = 51/212 (24%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ VD K +KAQI
Sbjct: 8 EDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDAKVLKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+EN ERWLRELRDH D NIV+ML+G
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAERWLRELRDHTDPNIVVMLIGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 128 KSDLR---------------------------------------------------HLVA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAF 216
V D+ K FAER +L F+ETSAL++TNVE AF
Sbjct: 137 VSTDDGKAFAERESLYFMETSALEATNVENAF 168
>gi|226443180|ref|NP_001140072.1| ras-related protein Rab-25 [Salmo salar]
gi|221221692|gb|ACM09507.1| Ras-related protein Rab-25 [Salmo salar]
Length = 211
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 150/220 (68%), Gaps = 52/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ E Y+++FKVVLIG+SGVGKSNLLSRFT+NEFN +S++TIGVEF+TR+IQ+ I
Sbjct: 1 MGSDE-AYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTIQLKSLII 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDI KHLTYE+VERWL+EL DHAD +IV+M
Sbjct: 60 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK+DL
Sbjct: 120 LVG---------------------------------------------------NKTDLG 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R+VP +EAK FAE+N L F+ETSAL+STNVETAFQN+L
Sbjct: 129 SERSVPNEEAKDFAEKNGLLFLETSALESTNVETAFQNVL 168
>gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thaliana]
Length = 231
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/239 (55%), Positives = 151/239 (63%), Gaps = 69/239 (28%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV---- 55
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVISLL 60
Query: 56 -----------DQ--KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV 102
DQ KT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T+ENV
Sbjct: 61 SLSLNLDNFPPDQFGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENV 120
Query: 103 ERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRD 162
RWLRELRDHAD NIVIM+ G
Sbjct: 121 LRWLRELRDHADSNIVIMMAG--------------------------------------- 141
Query: 163 HADQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
NKSDL HLR+V ++ ++ AE+ LSF+ETSAL++TN+E AFQ IL+
Sbjct: 142 ------------NKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILS 188
>gi|82793187|ref|XP_727942.1| small GTPase Rab11 [Plasmodium yoelii yoelii 17XNL]
gi|23484033|gb|EAA19507.1| small GTPase rab11-related [Plasmodium yoelii yoelii]
Length = 172
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/223 (56%), Positives = 148/223 (66%), Gaps = 52/223 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKT 59
M +ED YDYLFK+VLIGDSGVGKSNLLSRFTR+EFNLESKSTIGVEFAT+SIQ+ + K
Sbjct: 1 MSMKEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKI 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T+EN+E+WL+ELRD+AD NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
+LVG S DL
Sbjct: 121 LLVGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+HLR + ++A FA++ L+FIETSAL++TNVE AF +L
Sbjct: 130 KHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLLNG 172
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 145/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVL GDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+S+++D +TIKAQI
Sbjct: 10 DDKYDYLFKVVLTGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQI 69
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAIT+AYYRGAVGALLVYDI K T+ N+E WL ELR HA+ +IVIMLVG
Sbjct: 70 WDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRGHAEPDIVIMLVG- 128
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DLRHLR
Sbjct: 129 --------------------------------------------------NKCDLRHLRT 138
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ ++AK +AER+ L F+ETSAL+ST VE AF +IL
Sbjct: 139 ILTEDAKLWAERHGLFFMETSALESTGVENAFYSIL 174
>gi|342885037|gb|EGU85147.1| hypothetical protein FOXB_04325 [Fusarium oxysporum Fo5176]
Length = 197
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 135/197 (68%), Gaps = 51/197 (25%)
Query: 25 SNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYRAITSAYYRGA 84
SNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIWDTAGQERYRAITSAYYRGA
Sbjct: 8 SNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGA 67
Query: 85 VGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDI 144
VGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG S LR
Sbjct: 68 VGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLR--------------- 112
Query: 145 AKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIET 204
HLRAVP +EAK+FA N+LSFIET
Sbjct: 113 ------------------------------------HLRAVPTEEAKSFASENHLSFIET 136
Query: 205 SALDSTNVETAFQNILT 221
SALD++NVE AFQNILT
Sbjct: 137 SALDASNVELAFQNILT 153
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/221 (55%), Positives = 146/221 (66%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M +++ YDYL+K+VLIGDSGVGKSNLLSRFTR+EFNLESKSTIGVEFAT+SI K I
Sbjct: 1 MNVKDEYYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIMTQGKVI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ENVERWL+ELRDHAD NIV++
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVL 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S DL+
Sbjct: 121 LVGNKS---------------------------------------------------DLK 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV +EA F+E+ ++ +E SAL+S+NVE AF IL+
Sbjct: 130 HLRAVTQEEACMFSEKEGMACMEASALNSSNVEQAFHRILS 170
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 143/217 (65%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+QVD K IKAQI
Sbjct: 11 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQI 70
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T++NV RWLRELRDH D +IV ML+G
Sbjct: 71 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGN 130
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 131 KSDLR---------------------------------------------------HLVA 139
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K FAE ++ F+ETSALD+TNV+ AF +LT
Sbjct: 140 VSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLT 176
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 145/217 (66%), Gaps = 43/217 (19%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+YDYLFKVVL+GDSGVGKSNLLSRFTRN F+L+SKSTIGVEFATR+IQVD KTIKAQIW
Sbjct: 14 DDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIW 73
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD-QNIVIMLVGP 124
DTAGQERYRAITSAYYRGA GALLVYD+ + T+E+ RWLRELRDHAD + +MLVG
Sbjct: 74 DTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGN 133
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ L R G++S H RA
Sbjct: 134 KTDLARS------------------------------------------GSRSRHHHPRA 151
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP +A AER LSF+ETSALD+TNV+ AF+ +LT
Sbjct: 152 VPRGDAAALAEREGLSFVETSALDATNVDAAFETLLT 188
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 143/217 (65%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+QVD K IKAQI
Sbjct: 11 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQI 70
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T++NV RWLRELRDH D +IV ML+G
Sbjct: 71 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGN 130
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 131 KSDLR---------------------------------------------------HLVA 139
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K FAE ++ F+ETSALD+TNV+ AF +LT
Sbjct: 140 VSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLT 176
>gi|444318297|ref|XP_004179806.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
gi|387512847|emb|CCH60287.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
Length = 231
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 143/216 (66%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFNLESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN + WL ELR +AD N+ + L+G
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCQHWLTELRGNADANVAVGLIG--- 125
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL H+RAVP
Sbjct: 126 ------------------------------------------------NKSDLDHMRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK FA+ N L F ETSAL S+NV+ AF+ ++TA
Sbjct: 138 TDEAKNFAQENQLLFTETSALQSSNVDQAFRELITA 173
>gi|366993453|ref|XP_003676491.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
gi|342302358|emb|CCC70130.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 142/216 (65%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFN+ESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSA
Sbjct: 69 TAGQERYRAITSA----------------------------------------------- 81
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
YYRGAVGAL+VYDI+K TYEN WL+ELRD+AD N+ + L+GNKSDL HLRAVP
Sbjct: 82 ----YYRGAVGALIVYDISKSGTYENCNHWLKELRDNADDNVAVGLIGNKSDLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
EAK FA N L F ETSAL+S NV+ AF+ ++TA
Sbjct: 138 TAEAKNFASENELLFTETSALNSENVDQAFRELITA 173
>gi|259089516|ref|NP_001158557.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
gi|225704820|gb|ACO08256.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
Length = 205
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/194 (65%), Positives = 132/194 (68%), Gaps = 51/194 (26%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRN+FNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
S LR
Sbjct: 121 PADNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFA 194
HLRAVP DEA+ FA
Sbjct: 130 HLRAVPTDEARAFA 143
>gi|357135860|ref|XP_003569526.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 219
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 145/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNLLSRF R+EF+L+++STIGVEFAT+++QVD K +KAQI
Sbjct: 8 EEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLDTRSTIGVEFATKTVQVDGKLVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+EN ERWL ELRDH D NIV+MLVG
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHITFENAERWLAELRDHTDANIVVMLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 128 KADLR---------------------------------------------------HLRA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP +EA+ FAER+ +ETSAL+STNVE AF +L
Sbjct: 137 VPPEEARAFAERHRTFSMETSALESTNVEGAFTEVL 172
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 142/217 (65%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFK VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRSIQVD K +KAQI
Sbjct: 12 EDDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQI 71
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T++NV RWL+ELRDH D +IV+MLVG
Sbjct: 72 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGN 131
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 132 KSDLR---------------------------------------------------HLVA 140
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K +AE +L F+ETSALD+TNVE AF +LT
Sbjct: 141 VSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLT 177
>gi|225716714|gb|ACO14203.1| Ras-related protein YPTC6 [Esox lucius]
Length = 138
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/121 (95%), Positives = 118/121 (97%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYD+LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 L 121
L
Sbjct: 121 L 121
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 145/214 (67%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EFNLES+STIGVEFATR++++D K +KAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDIAK +YE+V RWL+EL++HAD NIVI LVG
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADSNIVIELVG--- 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 128 ------------------------------------------------NKSDLDHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+EAK FA+ NNL FIE SAL S NV+ +F +L
Sbjct: 140 TEEAKNFAQENNLLFIEASALSSDNVDLSFHQLL 173
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 141/219 (64%), Gaps = 51/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G +D YDYLFK+VL+GDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I++ K IK
Sbjct: 3 GETDDSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQNKIIK 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+ TY+N+E+WL ELRDHAD +IVIML
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTSGDTYDNIEKWLSELRDHADASIVIML 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NK DL H
Sbjct: 123 VG---------------------------------------------------NKCDLEH 131
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
LR A A+ FAE+ L FIETSAL++TNVE AF + L
Sbjct: 132 LRVTEAATAQQFAEKEGLMFIETSALNATNVEHAFIDSL 170
>gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica]
Length = 215
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 146/223 (65%), Gaps = 55/223 (24%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ +T
Sbjct: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ K T+E V WL+ELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKPTTFEQV--WLKELRDHADSNIVI 118
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
ML+G NK+DL
Sbjct: 119 MLIG---------------------------------------------------NKTDL 127
Query: 180 RHLRAVPADEAKTFAERNN-LSFIETSALDSTNVETAFQNILT 221
+H RAV ++A+ F R LSFIETSAL +TNVE AFQ IL
Sbjct: 128 KHSRAVRTEDAQGFMLRKKALSFIETSALKATNVEKAFQTILC 170
>gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 200
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/207 (60%), Positives = 140/207 (67%), Gaps = 51/207 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
+VLIGDSGVGKSNLL R+T+NEFNLESKSTIGVEFAT+SIQ D KTIKAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATKSIQFDNKTIKAQIWDTAGQDRY 60
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RA+TSA YRGAVGALLVYDI+KH TYENV++WL+ELRD AD +IVIMLVG S LR
Sbjct: 61 RAVTSACYRGAVGALLVYDISKHTTYENVDKWLKELRDQADPSIVIMLVGNKSDLR---- 116
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLR VP +EAK+F
Sbjct: 117 -----------------------------------------------HLRNVPTEEAKSF 129
Query: 194 AERNNLSFIETSALDSTNVETAFQNIL 220
A+RNNLSFIETSA STNVE+AF IL
Sbjct: 130 AQRNNLSFIETSASQSTNVESAFNTIL 156
>gi|410910942|ref|XP_003968949.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 210
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/222 (55%), Positives = 150/222 (67%), Gaps = 52/222 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ E Y++++KVVLIG+SGVGKSNLLSRFT+NEFN +S++TIGVEF+TR++Q+DQ TI
Sbjct: 1 MGSDES-YNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLDQYTI 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDI+KHLTYE+ ERWL+EL +HAD +IV+M
Sbjct: 60 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK DL
Sbjct: 120 LVG---------------------------------------------------NKRDLD 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
LR VP++EA+ FAE + F+ETSALDSTNVE AF +L+A
Sbjct: 129 TLRTVPSEEAQAFAENKGIMFMETSALDSTNVEAAFNEVLSA 170
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 147/221 (66%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG ED YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LE+KSTIGVEFATRS+ VD K +
Sbjct: 1 MGADED-YDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLV 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWL+ELRDH + +V+M
Sbjct: 60 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTEAYVVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG + LR
Sbjct: 120 LVGNKADLR--------------------------------------------------- 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV +EA FAE+ ++ F+ETSAL+S NV+ AF +LT
Sbjct: 129 HLRAVSTEEATEFAEKESIYFMETSALESLNVDNAFIEVLT 169
>gi|1279542|emb|CAA95859.1| small GTPase [Mangifera indica]
Length = 217
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 142/217 (65%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKV LIGDSGVGKSNL RFTRNEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 EDDYDYLFKVGLIGDSGVGKSNLALRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ AER +LSF+ETSAL++TNV+ AF +L+
Sbjct: 136 VSTEDGNLLAERESLSFMETSALEATNVDNAFAEVLS 172
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 145/217 (66%), Gaps = 43/217 (19%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+YDYLFKVVL+GDSGVGKSNLLSRFTRN F+L+SKSTIGVEFATR+IQVD KTIKAQIW
Sbjct: 14 DDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIW 73
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD-QNIVIMLVGP 124
DTAGQERYRAITSAYYRGA GALLVYD+ + T+E+ RWLRELRDHAD + +MLVG
Sbjct: 74 DTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGN 133
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ L R G++S H RA
Sbjct: 134 KTDLARS------------------------------------------GSRSRHHHPRA 151
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP +A AER LSF+ETSALD+TNV+ AF+ +LT
Sbjct: 152 VPRGDAAALAEREGLSFVETSALDATNVDAAFETLLT 188
>gi|1619855|gb|AAB16973.1| rab11-like, partial [Caenorhabditis elegans]
Length = 127
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 113/123 (91%), Positives = 120/123 (97%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI V+ KT+
Sbjct: 1 MGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH+TYENVERWL+ELRDHADQNIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIM 120
Query: 121 LVG 123
VG
Sbjct: 121 PVG 123
>gi|406608029|emb|CCH40656.1| GTP-binding protein YPT31/YPT8 [Wickerhamomyces ciferrii]
Length = 218
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 146/216 (67%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YLFK+VLIGDSGVGKSNLLSRFTRNEFNLES+STIGVEFATR++++D K +KAQIWD
Sbjct: 10 DYEYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESRSTIGVEFATRTVEIDGKRVKAQIWD 69
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYDI+K +YENV +WL+EL+++AD+NIVI LVG
Sbjct: 70 TAGQERYRAITSAYYRGAVGALLVYDISKSESYENVSKWLKELKENADENIVIELVG--- 126
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 127 ------------------------------------------------NKSDLDHLRAVP 138
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK F+ N L F E SAL++ NV+ +FQ +L +
Sbjct: 139 TDEAKQFSVENQLLFTEASALNAENVDLSFQQLLKS 174
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 141/213 (66%), Gaps = 51/213 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V+ K IKAQIWDT
Sbjct: 16 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDT 75
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRAITSAYYRGA+GA+LVYD+ K T+EN+ RWL+ELRDHAD NI IMLVG +
Sbjct: 76 AGQERYRAITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADANIRIMLVGNKT- 134
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
DL+HLRAV
Sbjct: 135 --------------------------------------------------DLKHLRAVTT 144
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
D+A ++AE LS+IETSAL++ NVE AFQ IL
Sbjct: 145 DDAGSYAEAEGLSYIETSALEAMNVEEAFQLIL 177
>gi|356549876|ref|XP_003543316.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 218
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 146/221 (66%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG ED YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LE+KSTIGVEFATRS+ VD K +
Sbjct: 1 MGADED-YDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLV 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWL+ELRDH + +V+M
Sbjct: 60 KAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRDHTEAYVVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG + LR
Sbjct: 120 LVGNKADLR--------------------------------------------------- 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV +EA +AE+ N+ F+ETSAL+S NV AF +LT
Sbjct: 129 HLRAVSTEEATEYAEKENIYFMETSALESLNVGNAFVEVLT 169
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 143/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EFNLES+STIGVEFATR++++D K +KAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDIAK +YE+V RWL+EL++HAD NIVI LVG
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVG--- 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 128 ------------------------------------------------NKSDLDHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
DEAK FA NNL F E SAL S NV+ +F +L
Sbjct: 140 TDEAKNFAMENNLLFTEASALSSDNVDLSFHQLL 173
>gi|388521711|gb|AFK48917.1| unknown [Lotus japonicus]
Length = 218
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 141/217 (64%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+S+ +D K IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+E RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL
Sbjct: 127 KSDLR---------------------------------------------------HLVT 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K FAE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLT 172
>gi|367001354|ref|XP_003685412.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
gi|357523710|emb|CCE62978.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
Length = 223
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 143/216 (66%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT N+FNLESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNLESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSA
Sbjct: 69 TAGQERYRAITSA----------------------------------------------- 81
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
YYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+GNKSDL HLRAVP
Sbjct: 82 ----YYRGAVGALIVYDISKQSSYENCNHWLTELRENADDNVAVGLIGNKSDLSHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+EAK FA+ N L F ETSAL+S NV+ AF+ ++T+
Sbjct: 138 TEEAKNFAQENQLLFTETSALNSENVDQAFRELITS 173
>gi|365990545|ref|XP_003672102.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
gi|343770876|emb|CCD26859.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
Length = 219
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 142/216 (65%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFN+ESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSA
Sbjct: 69 TAGQERYRAITSA----------------------------------------------- 81
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
YYRGAVGAL+VYDI+K TYEN WL EL+++AD N+ + L+GNKSDL HLRAVP
Sbjct: 82 ----YYRGAVGALIVYDISKSSTYENCNHWLTELKENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK FA N L F ETSAL+S NV+ AF+ ++TA
Sbjct: 138 TDEAKNFALENQLLFTETSALNSENVDQAFRELITA 173
>gi|448122797|ref|XP_004204534.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|448125077|ref|XP_004205092.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358249725|emb|CCE72791.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358350073|emb|CCE73352.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 143/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EFNLES+STIGVEFATR++++D K +KAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YE+V RWL+EL++HAD NIVI LVG
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVG--- 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 128 ------------------------------------------------NKSDLDHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
DEAK FA NNL F E SAL S NV+ +F +L
Sbjct: 140 TDEAKNFANENNLLFTEASALSSDNVDLSFHQLL 173
>gi|3024529|sp|Q40195.1|RB11E_LOTJA RecName: Full=Ras-related protein Rab11E
gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus]
Length = 218
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 141/217 (64%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+S+ +D K IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+E RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL
Sbjct: 127 KSDLR---------------------------------------------------HLVT 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K FAE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLT 172
>gi|432910564|ref|XP_004078416.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 208
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 151/220 (68%), Gaps = 52/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ E Y+++FKVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TR++Q++ TI
Sbjct: 1 MGSDE-AYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNSFTI 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDI KHLTYE+VERWL+EL DHADQ++V+M
Sbjct: 60 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELLDHADQHMVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK+DL
Sbjct: 120 LVG---------------------------------------------------NKTDLE 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R+VP++EAK FA++N L F+ETSAL+STNVE AF +L
Sbjct: 129 SERSVPSEEAKDFADKNGLMFLETSALESTNVEAAFNGVL 168
>gi|117655459|gb|ABK55619.1| RAB 11-a [Euplotes octocarinatus]
Length = 231
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 144/216 (66%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
EDEYDYL KVVLIGDSGVGKSNLLSRF +NEFNLESK+TIGVEF T++I+ K IKAQI
Sbjct: 6 EDEYDYLLKVVLIGDSGVGKSNLLSRFAKNEFNLESKTTIGVEFVTKTIECGSKIIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAV A LVYDI K T++NVE+WL+EL+D+AD NIV+MLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVAAFLVYDITKLHTFQNVEKWLQELKDYADSNIVVMLVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL +LRA
Sbjct: 125 --------------------------------------------------NKTDLNNLRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++A+ +AE+N L+FIETSALDSTNV AF+ I+
Sbjct: 135 VKVEDAQIYAEKNELAFIETSALDSTNVVEAFEQII 170
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
Length = 220
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 144/214 (67%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EFNLES+STIGVEFATR++++D K +KAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YE+V RWL+ELR+HAD NIVI LVG
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELREHADANIVIELVG--- 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 128 ------------------------------------------------NKSDLDHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+EAK+FA NNL F E SAL S NV+ +F +L
Sbjct: 140 TEEAKSFATENNLLFTEASALSSDNVDLSFHQLL 173
>gi|50412303|ref|XP_457123.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
gi|49652788|emb|CAG85116.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
Length = 220
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 143/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EFNLES+STIGVEFATR++++D K +KAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YE+V RWL+EL++HAD NIVI LVG
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKAESYESVSRWLKELKEHADANIVIELVG--- 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 128 ------------------------------------------------NKSDLDHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
DEAK FA NNL F E SAL S NV+ +F +L
Sbjct: 140 TDEAKNFANENNLLFTEASALSSDNVDLSFHQLL 173
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
Length = 245
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 142/216 (65%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFN+ESKSTIGVEFATR+I+++ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEMEGKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSA
Sbjct: 69 TAGQERYRAITSA----------------------------------------------- 81
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
YYRGAVGAL+VYDI+K TYEN WL ELR++AD N+ + L+GNKSDL HLRAVP
Sbjct: 82 ----YYRGAVGALIVYDISKSSTYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK FA N L F ETSAL+S NV+ AF+ ++TA
Sbjct: 138 TDEAKNFALENQLLFTETSALNSENVDQAFRELITA 173
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 148/220 (67%), Gaps = 52/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ E Y+++FKVVLIG+SGVGKSNLLSRFT+NEFN +S++TIGVEF+TR++Q++ TI
Sbjct: 1 MGSDE-AYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFTI 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDI KHLTYE+VERWL+EL +HAD +IV+M
Sbjct: 60 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYEHADPHIVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
L+G NKSDL
Sbjct: 120 LIG---------------------------------------------------NKSDLE 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R+VP +EAK FAE+ L F+ETSALDSTNVE AF +L
Sbjct: 129 SERSVPTEEAKDFAEKKGLLFLETSALDSTNVEAAFTTVL 168
>gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus]
Length = 218
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 147/219 (67%), Gaps = 54/219 (24%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI+VD K +KAQ+
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQV 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+++H+T+ENVERWL+ELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVSRHVTFENVERWLKELRDHTDTNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFA--ERNNLSFIETSALDSTNVETAFQNILT 221
V +++ F ER + F+ETSAL+S NVE AF +LT
Sbjct: 136 VSTEDSSGFLLNERTHF-FMETSALESLNVENAFTEVLT 173
>gi|384493128|gb|EIE83619.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 140/221 (63%), Gaps = 59/221 (26%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+YDYLFKVVLIGDSGVGK+NLL RFTRNEFNLESKSTIGVEFATRSIQVD K IKAQIW
Sbjct: 3 DDYDYLFKVVLIGDSGVGKTNLLGRFTRNEFNLESKSTIGVEFATRSIQVDNKVIKAQIW 62
Query: 66 DTAGQERYRAITS-----AYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
DT Y TS +YYRGAVGALL YDI+KH T+E+V RWL+ELRDHAD NIVIM
Sbjct: 63 DTG---NYFISTSYTLNISYYRGAVGALLCYDISKHSTFESVSRWLKELRDHADSNIVIM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 120 LVGNKSDLR--------------------------------------------------- 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEAK FA N LSFIETSALD+TNVE +FQ ILT
Sbjct: 129 HLRAVPTDEAKQFASENGLSFIETSALDATNVELSFQRILT 169
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 143/220 (65%), Gaps = 51/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M REDEYDYLFKVVLIGDSGVGKSNLLSRFTR+ F+LESKSTIGVEFATR++ +D K I
Sbjct: 17 MSGREDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVI 76
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+ K ++ N+ WL ELRDHA++NIV+M
Sbjct: 77 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMM 136
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG LR
Sbjct: 137 LVGNKCDLR--------------------------------------------------- 145
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
HLR V ++A+ FA++ LSFIETSALDSTNVE AF IL
Sbjct: 146 HLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQIL 185
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 141/216 (65%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFN++SKSTIGVEFATR+I VD K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDVDGKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCHHWLSELRENADDNVAVGLIG--- 125
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 126 ------------------------------------------------NKSDLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+EAK FA N L F ETSAL+S NV+ AF+ ++TA
Sbjct: 138 TEEAKQFASENQLLFTETSALNSDNVDLAFKELITA 173
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 143/220 (65%), Gaps = 51/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M REDEYDYLFKVVLIGDSGVGKSNLLSRFTR+ F+LESKSTIGVEFATR++ +D K I
Sbjct: 6 MSGREDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVI 65
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+ K ++ N+ WL ELRDHA++NIV+M
Sbjct: 66 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMM 125
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG LR
Sbjct: 126 LVGNKCDLR--------------------------------------------------- 134
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
HLR V ++A+ FA++ LSFIETSALDSTNVE AF IL
Sbjct: 135 HLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQIL 174
>gi|254583127|ref|XP_002499295.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
gi|238942869|emb|CAR31040.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
Length = 218
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 142/216 (65%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT N+FN+ESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIG--- 125
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 126 ------------------------------------------------NKSDLDHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK FA+ N L F ETSAL S NV+ AF+ ++TA
Sbjct: 138 TDEAKNFAQENQLLFTETSALKSENVDLAFRELITA 173
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 143/220 (65%), Gaps = 51/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M REDEYDYLFKVVLIGDSGVGKSNLLSRFTR+ F+LESKSTIGVEFATR++ +D K I
Sbjct: 6 MSGREDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVI 65
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+ K ++ N+ WL ELRDHA++NIV+M
Sbjct: 66 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMM 125
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG LR
Sbjct: 126 LVGNKCDLR--------------------------------------------------- 134
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
HLR V ++A+ FA++ LSFIETSALDSTNVE AF IL
Sbjct: 135 HLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQIL 174
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 142/217 (65%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFK V+IGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS+QVD K +KAQI
Sbjct: 12 EDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQI 71
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T++NV RWL+ELRDH D +IV+MLVG
Sbjct: 72 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDSSIVVMLVGN 131
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 132 KSDLR---------------------------------------------------HLVA 140
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ + +AE +L F+ETSALD+TNV+ AF +LT
Sbjct: 141 VSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLT 177
>gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113672|gb|EDO15222.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 220
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 142/216 (65%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT +EF+LESKSTIGVEFATR+I VD K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFHLESKSTIGVEFATRTIDVDGKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSA
Sbjct: 69 TAGQERYRAITSA----------------------------------------------- 81
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
YYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+GNKSDL HLRAVP
Sbjct: 82 ----YYRGAVGALIVYDISKQSSYENCNHWLAELRENADDNVAVGLIGNKSDLSHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK FA+ N L F ETSAL+S NV+ AF+ ++T+
Sbjct: 138 TDEAKKFAQENQLLFTETSALNSENVDQAFRELITS 173
>gi|3024506|sp|Q40523.1|RB11A_TOBAC RecName: Full=Ras-related protein Rab11A
gi|623582|gb|AAA74115.1| Nt-Rab11a [Nicotiana tabacum]
Length = 216
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/222 (56%), Positives = 144/222 (64%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALL YDI K T++NV+RWLRELRDH D NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
+L G S DL
Sbjct: 121 ILAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+HLRAV + + ++ LSF+ETSAL++ NV+ AFQ ILT
Sbjct: 130 KHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILT 171
>gi|74137312|dbj|BAE22024.1| unnamed protein product [Mus musculus]
Length = 193
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 137/221 (61%), Gaps = 76/221 (34%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFK ESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFK-------------------------ESKSTIGVEFATRSIQVDGKTI 35
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 36 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 95
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 96 LVGNKSDLR--------------------------------------------------- 104
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSA+DSTNVE AF+NILT
Sbjct: 105 HLRAVPTDEARAFAEKNNLSFIETSAMDSTNVEEAFKNILT 145
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 140/217 (64%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEF T+S+ +D K IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNIDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+E RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL
Sbjct: 127 KSDLR---------------------------------------------------HLVT 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K FAE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLT 172
>gi|126138088|ref|XP_001385567.1| hypothetical protein PICST_68134 [Scheffersomyces stipitis CBS
6054]
gi|126092845|gb|ABN67538.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 220
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 143/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EFNLES+STIGVEFATR++++D K +KAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDIAK TYE+V RWL+EL++HAD NIVI LVG
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTETYESVSRWLKELKEHADANIVIELVG--- 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 128 ------------------------------------------------NKSDLDHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+EA+ FA NNL F E SAL S NV+ +F +L
Sbjct: 140 TEEARNFANENNLLFTEASALSSDNVDLSFHQLL 173
>gi|58267306|ref|XP_570809.1| ras-related protein ypt3 (rab) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57227043|gb|AAW43502.1| ras-related protein ypt3 (rab), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 205
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/196 (63%), Positives = 131/196 (66%), Gaps = 51/196 (26%)
Query: 26 NLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAV 85
NLLSRFTRNEFNLESKSTIGVEFATRSI VD KT+KAQIWDTAGQERYRAITSAYYRGAV
Sbjct: 17 NLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRAITSAYYRGAV 76
Query: 86 GALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIA 145
GALLVYDIAKH TYENV RWL+ELRDHAD NIVIMLVG S L
Sbjct: 77 GALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL----------------- 119
Query: 146 KHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETS 205
+HLRAV DEAK FA N LSFIETS
Sbjct: 120 ----------------------------------KHLRAVSTDEAKQFATENGLSFIETS 145
Query: 206 ALDSTNVETAFQNILT 221
ALD++NVE+AFQNILT
Sbjct: 146 ALDASNVESAFQNILT 161
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 142/217 (65%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFK V+IGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS+QVD K +KAQI
Sbjct: 12 EDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQI 71
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T++NV RWL+ELRDH D +IV+MLVG
Sbjct: 72 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGN 131
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 132 KSDLR---------------------------------------------------HLVA 140
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ + +AE +L F+ETSALD+TNV+ AF +LT
Sbjct: 141 VSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLT 177
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 123/221 (55%), Positives = 147/221 (66%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKT 59
M +ED YDYLFK+VLIGDSGVGKSNLLSRFTR+EFNLESKSTIGVEFAT+SIQ+ + K
Sbjct: 1 MAMKEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKI 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K ++EN+E+WL+ELRD+AD NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
+LVG S L
Sbjct: 121 LLVGNKSDL--------------------------------------------------- 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+HLR + ++A +A++ L+FIETSAL++TNVE AF +L
Sbjct: 130 KHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLL 170
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 143/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EFNLES+STIGVEFATR++++D K +KAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDIAK +YE+V RWL+EL++HAD NI+I LVG
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVG--- 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 128 ------------------------------------------------NKSDLDHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+EAK FA NNL F E SAL S NV+ +F +L
Sbjct: 140 TEEAKNFAMENNLLFTEASALSSDNVDLSFHQLL 173
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 142/217 (65%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFK V+IGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS+QVD K +KAQI
Sbjct: 13 EDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQI 72
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T++NV RWL+ELRDH D +IV+MLVG
Sbjct: 73 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFDNVARWLKELRDHTDPSIVVMLVGN 132
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 133 KSDLR---------------------------------------------------HLVA 141
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ + +AE +L F+ETSALD+TNV+ AF +LT
Sbjct: 142 VSTEDGQEYAEAESLYFMETSALDATNVDNAFAEVLT 178
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 144/214 (67%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EFNL+S+STIGVEFATR++++D K +KAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLDSRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YE+V RWL+EL++HAD NIVI LVG
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVG--- 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 128 ------------------------------------------------NKSDLDHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
DEAK FA N+L F E SAL+S NV+ +F +L
Sbjct: 140 TDEAKNFANENSLLFTEASALNSDNVDLSFHQLL 173
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 145/220 (65%), Gaps = 51/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEFN +S++TIGVEF+TR+I V +
Sbjct: 1 MGSAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIMVGDAVV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGAL+V+DI KH TY+ VERWL+EL DHA+ NIV+M
Sbjct: 61 KAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEANIVVM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK+DL
Sbjct: 121 LVG---------------------------------------------------NKTDLA 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EAK FA+ N L F+ETSALDSTNVE AF+ IL
Sbjct: 130 QAREVPMEEAKMFADNNGLLFVETSALDSTNVEQAFETIL 169
>gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450894|gb|EDK45150.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 221
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 143/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EFNLES+STIGVEFATR++++D K +KAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGA+GAL+VYDIAK +YE+V RWL+EL++HAD NIVI LVG
Sbjct: 71 TAGQERYRAITSAYYRGALGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVG--- 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 128 ------------------------------------------------NKSDLDHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
DEA+ FA NNL F E SAL S NV+ +F +L
Sbjct: 140 TDEARNFAMENNLLFTEASALSSDNVDLSFHQLL 173
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 143/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EFNLES+STIGVEFATR++++D K +KAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDIAK +YE+V RWL+EL++HAD NI+I LVG
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVG--- 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 128 ------------------------------------------------NKSDLDHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+EAK FA NNL F E SAL S NV+ +F +L
Sbjct: 140 TEEAKNFAMENNLLFTEASALSSDNVDLSFHQLL 173
>gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51513190|gb|AAH80339.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271301|emb|CAJ82444.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 150/221 (67%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ E+E++++FKVVLIG+SGVGK+NLLSRFTRNEFN +S++TIGVEF+TR++ +D +
Sbjct: 1 MGSEEEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
K+QIWDTAG ERYRAITSAYYRGAVGALLVYDI KH +YE+V+RWL+EL DHAD +IV+M
Sbjct: 61 KSQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK DL+
Sbjct: 121 LVG---------------------------------------------------NKCDLK 129
Query: 181 -HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ VP++EAK +AERN L FIETSALD+TNVE AF++IL
Sbjct: 130 DEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFESIL 170
>gi|71480092|ref|NP_001025142.1| uncharacterized protein LOC574424 [Danio rerio]
gi|68533943|gb|AAH98608.1| Zgc:112037 [Danio rerio]
Length = 210
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/221 (55%), Positives = 149/221 (67%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ E Y+++FKVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TR++Q++ TI
Sbjct: 1 MGSDE-AYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLTI 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDI+KHLTYE+ ERWL+EL DHAD +IV+M
Sbjct: 60 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NKSDL
Sbjct: 120 LVG---------------------------------------------------NKSDLA 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+R+VP ++AK FAE+N L F ETSAL+S NVE AF +LT
Sbjct: 129 AVRSVPTEDAKDFAEKNGLLFKETSALESVNVEAAFNTVLT 169
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 143/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EFNLES+STIGVEFATR++++D K +KAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDIAK +YE+V RWL+EL++HAD NIVI LVG
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVG--- 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 128 ------------------------------------------------NKSDLDHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+EA+ FA NNL F E SAL S NV+ +F +L
Sbjct: 140 TEEARNFALENNLLFTEASALSSDNVDLSFHQLL 173
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 143/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YL+K+VLIGDSGVGKSNLLSRFTR+EFNLES+STIGVEFATR++++D K +KAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDIAK +YE+V RWL+EL++HAD NIVI LVG
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVG--- 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 128 ------------------------------------------------NKSDLDHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+EA+ FA NNL F E SAL S NV+ +F +L
Sbjct: 140 TEEARNFALENNLLFTEASALSSDNVDLSFHQLL 173
>gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japonicum]
Length = 218
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 143/217 (65%), Gaps = 51/217 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
+E+EYDYLFK+VLIGDSGVGKSNLLSRFTR+ FNLESKSTIGVEFATR++ +D K IKAQ
Sbjct: 9 KEEEYDYLFKIVLIGDSGVGKSNLLSRFTRDTFNLESKSTIGVEFATRNVNIDGKVIKAQ 68
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAITSAYYRGAVGALLVYD+ ++ N+E WL+EL DHA++NIV+MLVG
Sbjct: 69 IWDTAGQERYRAITSAYYRGAVGALLVYDVCVLQSFRNLEIWLKELNDHAEKNIVVMLVG 128
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
LR HLR
Sbjct: 129 NKCDLR---------------------------------------------------HLR 137
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+V ++A+ FA++ LSFIETSALDSTNVE AF IL
Sbjct: 138 SVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQIL 174
>gi|225450193|ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 146/220 (66%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS LL+RF RNEFNL+SK+TIGVEF T+++ +D KT+K
Sbjct: 7 GDYSQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVIDHKTVK 66
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K ++++V RWL+ELR HAD+NIVIML
Sbjct: 67 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADKNIVIML 126
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 127 VG---------------------------------------------------NKSDLGT 135
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
L+AVP ++AK FAER NL F+ETSAL++TNVETAF ++LT
Sbjct: 136 LQAVPTEDAKEFAERENLFFMETSALEATNVETAFLSVLT 175
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 143/216 (66%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNLLSRF R+EF+LE++STIGVEFAT+++QVD K +KAQI
Sbjct: 8 EEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+++ T++N ERWLRELRDH D NIV+MLVG
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLRELRDHTDANIVVMLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 128 KADLR---------------------------------------------------HLRA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++A FAER+ +ETSALD+TNVE AF +L
Sbjct: 137 VSPEDAAAFAERHGTFSMETSALDATNVERAFAEVL 172
>gi|322694053|gb|EFY85893.1| GTP-binding protein ypt3 [Metarhizium acridum CQMa 102]
Length = 264
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 132/195 (67%), Gaps = 51/195 (26%)
Query: 27 LLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVG 86
L SRFTRNEFNL+SKSTIGVEFATRSIQVD KTIKAQIWDTAGQERYRAITSAYYRGAVG
Sbjct: 35 LQSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVG 94
Query: 87 ALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAK 146
ALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG S LR
Sbjct: 95 ALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLR----------------- 137
Query: 147 HLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSA 206
HLRAVP DEAK+FA N+LSFIETSA
Sbjct: 138 ----------------------------------HLRAVPTDEAKSFASENHLSFIETSA 163
Query: 207 LDSTNVETAFQNILT 221
LD++NVE AFQNILT
Sbjct: 164 LDASNVELAFQNILT 178
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 142/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YD LFK+VLIGDSGVGKSNLLSRFT+NEFN++SKSTIGVEFATR++++D K IKAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIG--- 125
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 126 ------------------------------------------------NKSDLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+E+KTFA+ N L F ETSAL+S NV+ AF+ ++
Sbjct: 138 TEESKTFAQENQLLFTETSALNSENVDKAFEELI 171
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 145/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNLLSRF R+EF+LE++STIGVEFAT++++VD + +KAQI
Sbjct: 13 EEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQI 72
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ + +T+EN ERWL+ELRDH D NIV+MLVG
Sbjct: 73 WDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVMLVGN 132
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 133 KADLR---------------------------------------------------HLRA 141
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VPA++A+ FAE + +ETSAL++TNVE AF +L
Sbjct: 142 VPAEDARAFAEAHGTFSMETSALEATNVEGAFTEVL 177
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 141/221 (63%), Gaps = 56/221 (25%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+YDYLFKVVL+GDSGVGKSNLLSRFTRN F+L+SKSTIGVEFATR+IQVD KTIKAQIW
Sbjct: 15 DDYDYLFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATRTIQVDGKTIKAQIW 74
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD-QNIVIMLVGP 124
DTAGQERYRA+TSAYYRGAVGALLVYD+ K T+ N RWLRELRDHAD + +MLVG
Sbjct: 75 DTAGQERYRAVTSAYYRGAVGALLVYDVTKSATFGNAARWLRELRDHADGRGTAVMLVG- 133
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH--- 181
NK+DL
Sbjct: 134 --------------------------------------------------NKTDLAKQRG 143
Query: 182 -LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP + AER LSF+ETSALD+TNV+ AF +LT
Sbjct: 144 GLRAVPRGDGAALAEREGLSFVETSALDATNVDAAFVTLLT 184
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/221 (54%), Positives = 146/221 (66%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M ++++ YDYL+K+VLIGDSGVGKSNLLSRFTR+EFNLESKSTIGVEFAT+SI + K I
Sbjct: 1 MSSKDEHYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIITEGKVI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ENVERWL+ELRDHAD NIV++
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVL 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+LR V +EA F+ER ++ +E SAL+S+NV+ AF IL+
Sbjct: 130 NLRTVTQEEACAFSEREGMACMEASALNSSNVDEAFHRILS 170
>gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761230|pdb|3BFK|B Chain B, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761231|pdb|3BFK|C Chain C, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761232|pdb|3BFK|D Chain D, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761233|pdb|3BFK|E Chain E, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
Length = 181
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 145/216 (67%), Gaps = 52/216 (24%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKTIKAQI 64
D YDYLFK+VLIGDSGVGKSNLLSRFTR+EFNLESKSTIGVEFAT+SIQ+ + K IKAQI
Sbjct: 2 DYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQI 61
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K ++EN+E+WL+ELRD+AD NIVI+LVG
Sbjct: 62 WDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGN 121
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL+HLR
Sbjct: 122 KS---------------------------------------------------DLKHLRV 130
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ ++A +A++ L+FIETSAL++TNVE AF +L
Sbjct: 131 INDNDATQYAKKEKLAFIETSALEATNVELAFHQLL 166
>gi|291233885|ref|XP_002736881.1| PREDICTED: Ras-related protein Rab-11A-like, partial [Saccoglossus
kowalevskii]
Length = 145
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 130/193 (67%), Gaps = 52/193 (26%)
Query: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
+ F VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAG
Sbjct: 1 FFFVVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 60
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLR 129
QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVG S LR
Sbjct: 61 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLR 120
Query: 130 RYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADE 189
HLRAVP DE
Sbjct: 121 ---------------------------------------------------HLRAVPTDE 129
Query: 190 AKTFAERNNLSFI 202
AK FA R N SF+
Sbjct: 130 AKAFAGRTN-SFL 141
>gi|225708476|gb|ACO10084.1| Ras-related protein Rab-25 [Osmerus mordax]
Length = 212
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 149/224 (66%), Gaps = 54/224 (24%)
Query: 1 MGTR---EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQ 57
MG R + Y+++FKVVLIG+SGVGKSNLLSRF +NEFN +S++TIGVEF+TR++Q++
Sbjct: 1 MGHRMKSNEAYNFVFKVVLIGESGVGKSNLLSRFAKNEFNHDSRTTIGVEFSTRTVQLNG 60
Query: 58 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNI 117
TIKAQIWDTAG ERYRAITSAYYRGAVGALLVYD+ KHLTYE+VERWL+EL DHAD ++
Sbjct: 61 LTIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDVTKHLTYESVERWLKELYDHADPHM 120
Query: 118 VIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKS 177
V+MLVG NKS
Sbjct: 121 VVMLVG---------------------------------------------------NKS 129
Query: 178 DLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DL R+VP +EAK FAE+ L F+ETSAL+STNVE AF ++L+
Sbjct: 130 DLVSERSVPTEEAKDFAEKKGLLFLETSALESTNVEAAFNDVLS 173
>gi|302308393|ref|NP_985289.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|299789434|gb|AAS53113.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|374108515|gb|AEY97422.1| FAER434Cp [Ashbya gossypii FDAG1]
Length = 219
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 146/225 (64%), Gaps = 54/225 (24%)
Query: 1 MGTRED---EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQ 57
M ED +YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ SKSTIGVEFATR+I+V+
Sbjct: 1 MSNNEDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEG 60
Query: 58 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNI 117
K +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD+N+
Sbjct: 61 KKVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENV 120
Query: 118 VIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKS 177
+ L+G NKS
Sbjct: 121 AVGLIG---------------------------------------------------NKS 129
Query: 178 DLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DL HLRAVP DEAK +A+ N + F ETSAL++ NV+ AF+ ++TA
Sbjct: 130 DLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITA 174
>gi|365760833|gb|EHN02521.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 222
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 141/216 (65%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSA
Sbjct: 69 TAGQERYRAITSA----------------------------------------------- 81
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
YYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+GNKSDL HLRAVP
Sbjct: 82 ----YYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK FA N + F ETSAL+S NV+ AF+ ++ A
Sbjct: 138 TDEAKNFAMENQMLFTETSALNSDNVDRAFRELIVA 173
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 142/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YD LFK+VLIGDSGVGKSNLLSRFT+NEFN++SKSTIGVEFATR++++D K IKAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIG--- 125
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 126 ------------------------------------------------NKSDLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+E+KTFA+ N L F ETSAL+S NV+ AF+ ++
Sbjct: 138 TEESKTFAQENQLLFTETSALNSENVDEAFEELI 171
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 147/224 (65%), Gaps = 55/224 (24%)
Query: 1 MGTREDEY----DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD 56
MG D+Y +YL+K+VLIGDSGVGKSNLLSRFTR+EFNLES+STIGVEFATR++++D
Sbjct: 1 MGDNTDDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 57 QKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQN 116
+ +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDI+K +YE+V RWL+EL++HAD N
Sbjct: 61 GRRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADTN 120
Query: 117 IVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 176
IVI LVG NK
Sbjct: 121 IVIELVG---------------------------------------------------NK 129
Query: 177 SDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
SDL HLRAVP +EAK+FA N+L F E SAL S NV+ +F +L
Sbjct: 130 SDLDHLRAVPTEEAKSFANENSLLFTEASALSSDNVDLSFHQLL 173
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 141/214 (65%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YD LFK+VLIGDSGVGKSNLLSRFT+NEFN++SKSTIGVEFATR++++D K IKAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR+ AD N+ + L+G
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELREKADDNVAVGLIG--- 125
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 126 ------------------------------------------------NKSDLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+E+KTFA+ N L F ETSAL+S NV+ AF+ ++
Sbjct: 138 TEESKTFAQENQLLFTETSALNSENVDKAFEELI 171
>gi|255070867|ref|XP_002507515.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
gi|226522790|gb|ACO68773.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
Length = 217
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/223 (55%), Positives = 142/223 (63%), Gaps = 53/223 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV--DQK 58
M D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF ESKSTIGVEFATR I+V + K
Sbjct: 1 MSKDHDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCSESKSTIGVEFATRCIEVCLEGK 60
Query: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
T+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K +Y+NV++WL+ELRDHAD NIV
Sbjct: 61 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYDNVQKWLKELRDHADSNIV 120
Query: 119 IMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
I LVG + L
Sbjct: 121 ITLVGNKTDL-------------------------------------------------- 130
Query: 179 LRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+HLR+V A+ A F+ LSF+ETSA +STNV+ AF+ LT
Sbjct: 131 -KHLRSVQAESAAEFSSIEGLSFVETSACESTNVDVAFKKNLT 172
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 223
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 142/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YD LFK+VLIGDSGVGKSNLLSRFT+NEFN++SKSTIGVEFATR++++D K IKAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIG--- 125
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 126 ------------------------------------------------NKSDLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+E+KTFA+ N L F ETSAL+S NV+ AF+ ++
Sbjct: 138 TEESKTFAQENQLLFTETSALNSENVDKAFEELI 171
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 143/216 (66%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNLLSRF R+EF+LE++STIGVEFAT+++QVD K +KAQI
Sbjct: 8 EEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+ + +T++N ERWLRELRDH D NIV+MLVG
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDANIVVMLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 128 KADLR---------------------------------------------------HLRA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++A FAER+ +ETSALD+TNV+ AF +L
Sbjct: 137 VTPEDAAAFAERHGTFSMETSALDATNVDRAFAEVL 172
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF RNEFNL+SK+TIGVEF TR++ +D +T+KAQIWDTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTA 75
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K ++++V RWL ELR HAD+NIVIML+G
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIG----- 130
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL LR VP +
Sbjct: 131 ----------------------------------------------NKSDLGTLRVVPTE 144
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAER NL F+ETSAL+STNVE AF +LT
Sbjct: 145 DAKEFAERENLFFMETSALESTNVENAFMTVLT 177
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 147/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ ED Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TR++Q++ I
Sbjct: 1 MGS-EDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFRHDSRTTIGVEFSTRTVQLENFII 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDI+KHLTYE+ ERWL+EL DHAD +IV+M
Sbjct: 60 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S DL+
Sbjct: 120 LVGNKS---------------------------------------------------DLQ 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
R VP +EA+ FA+ L F+ETSALDSTNVE+AF +LTA
Sbjct: 129 SQRTVPTEEAQHFADEKGLMFMETSALDSTNVESAFHEVLTA 170
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 143/216 (66%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFN+ESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD+N+ + L+G S
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKS 128
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
D+A HLRAVP
Sbjct: 129 ----------------DLA-----------------------------------HLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK FA+ N L F ETSAL+S NV+ AF+ ++TA
Sbjct: 138 TDEAKNFAQENQLLFTETSALNSENVDQAFRELITA 173
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LLSRF RNEF+L+SK+TIGVEF T+++ +DQK IKAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWDTA 72
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYD+ K T++++ RWL ELR HAD+NIVIML+G
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIG----- 127
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL LR VP +
Sbjct: 128 ----------------------------------------------NKSDLGSLRVVPTE 141
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FA+ NLSF+ETSAL++TNVE AF ILT
Sbjct: 142 DAKEFAQMENLSFMETSALEATNVEAAFNTILT 174
>gi|147902449|ref|NP_001086223.1| RAB25, member RAS oncogene family [Xenopus laevis]
gi|49258038|gb|AAH74344.1| MGC84182 protein [Xenopus laevis]
Length = 216
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 150/220 (68%), Gaps = 50/220 (22%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ E++++++FKVVLIG+SGVGK+NLLSRFTRNEFN +S++TIGVEF+TR++ +D +
Sbjct: 1 MGSEEEDFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
K+QIWDTAG ERYRAITSAYYRGAVGALLVYDI KH +YE+V+RWL+EL DHAD +IV+M
Sbjct: 61 KSQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S +L+D A +
Sbjct: 121 LVGNKS--------------------------------DLKDEAQE-------------- 134
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP++EAK +AERN L FIETSALD+TNVE AF+ IL
Sbjct: 135 ----VPSEEAKAYAERNGLLFIETSALDATNVELAFETIL 170
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 143/213 (67%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FK+VLIGDS VGKS LL+RF RNEFNL+SK+TIGVEF T++I VD KT+KAQIWDTA
Sbjct: 13 DYVFKIVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVVDHKTVKAQIWDTA 72
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K ++++V +WL ELR+HAD NIVIMLVG
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELREHADNNIVIMLVG----- 127
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL LRAVP +
Sbjct: 128 ----------------------------------------------NKSDLESLRAVPIE 141
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FA++ NL F+ETSAL++TNVE+AF ++LT
Sbjct: 142 DAKEFAQKENLFFMETSALEATNVESAFISVLT 174
>gi|363748106|ref|XP_003644271.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887903|gb|AET37454.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 143/216 (66%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ SKSTIGVEFATR+I+V+ K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD+N+ + L+G
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLAELRENADENVAVGLIG--- 125
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 126 ------------------------------------------------NKSDLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK +A+ N + F ETSAL++ NV+ AF+ ++TA
Sbjct: 138 TDEAKNYAQENQMLFTETSALNAENVDLAFRELITA 173
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LLSRF RNEF+L+SK+TIGVEF T+++ +DQK IKAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWDTA 72
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYD+ K T++++ RWL ELR HAD+NIVIML+G
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIG----- 127
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL LR VP +
Sbjct: 128 ----------------------------------------------NKSDLGSLRVVPTE 141
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FA+ NLSF+ETSAL++TNVE AF ILT
Sbjct: 142 DAKEFAQMENLSFMETSALEATNVEAAFNTILT 174
>gi|323348755|gb|EGA82996.1| Ypt32p [Saccharomyces cerevisiae Lalvin QA23]
Length = 222
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 140/216 (64%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSA
Sbjct: 69 TAGQERYRAITSA----------------------------------------------- 81
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
YYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+GNKSDL HLRAVP
Sbjct: 82 ----YYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK FA N + F TSAL+S NV+ AF+ ++ A
Sbjct: 138 TDEAKNFAMENQMLFTXTSALNSDNVDKAFRELIVA 173
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c; AltName:
Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 143/213 (67%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF+RNEF++ESK+TIGVEF TR++++D+KTIKAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTA 72
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K ++++V RWL ELR HAD+NIVIML+G
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIG----- 127
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK+DL LRAVP +
Sbjct: 128 ----------------------------------------------NKTDLGTLRAVPTE 141
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FA+R NL F+ETSALDS NVE +F +LT
Sbjct: 142 DAKEFAQRENLFFMETSALDSNNVEPSFLTVLT 174
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 142/216 (65%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+EYDYLFKVVLIGDSGVGKSNLLSRF R+EF+LE++STIGVEFAT+++QVD K +KAQI
Sbjct: 8 EEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYD+++ T++N ERWLRE RDH D NIV+MLVG
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLREPRDHTDANIVVMLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 128 KADLR---------------------------------------------------HLRA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++A FAER+ +ETSALD+TNVE AF +L
Sbjct: 137 VSPEDAAAFAERHGTFSMETSALDATNVERAFAEVL 172
>gi|187609401|pdb|3CPJ|B Chain B, Crystal Structure Of Ypt31 In Complex With Yeast Rab-Gdi
Length = 223
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 142/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YD LFK+VLIGDSGVGKSNLLSRFT+NEFN++SKSTIGVEFATR+++++ K IKAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIG--- 125
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 126 ------------------------------------------------NKSDLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+E+KTFA+ N L F ETSAL+S NV+ AF+ ++
Sbjct: 138 TEESKTFAQENQLLFTETSALNSENVDKAFEELI 171
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ DY+FKVVLIGDS VGKS LL+RF+RNEF+LESK+TIGVEF TR++ VD KTIKAQI
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLESKATIGVEFQTRTVVVDHKTIKAQI 68
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRA+TSAYYRGAVGA+LVYDI K ++++V+RWL ELR HAD NIVIML+G
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIMLIG- 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL +LR
Sbjct: 128 --------------------------------------------------NKSDLSNLRQ 137
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D A+ FAE+ +LSF+ETSA++STNVETAF +L+
Sbjct: 138 VETDTAREFAEKESLSFLETSAMESTNVETAFFTVLS 174
>gi|297791923|ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297309681|gb|EFH40105.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 142/213 (66%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF+RNEF++ESK+TIGVEF TR++++D KTIKAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDHKTIKAQIWDTA 72
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K ++++V RWL ELR HAD+NIVIML+G
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIG----- 127
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK+DL LRAVP +
Sbjct: 128 ----------------------------------------------NKTDLGTLRAVPTE 141
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FA+R NL F+ETSALDS NVE +F +LT
Sbjct: 142 DAKEFAQRENLFFMETSALDSNNVEPSFLTVLT 174
>gi|392887275|ref|NP_001251691.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
gi|90185954|emb|CAJ85753.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
Length = 198
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 143/216 (66%), Gaps = 53/216 (24%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+EY YLFK+VLIG+ GVGKSNLLSRFTRNEFNL+SK TIGVEFAT+ I V+ K +K QIW
Sbjct: 3 NEYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIW 62
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAG ER+R S+YYRGA+GALLVYDI+KH TYE+VE+WL+ LRDHA+++IVI LVG
Sbjct: 63 DTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVG-- 120
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NKSDL H AV
Sbjct: 121 -------------------------------------------------NKSDLSH--AV 129
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
P DEAK +AERN++SFIETSALD+TNVE AF NI+T
Sbjct: 130 PTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVT 165
>gi|147899039|ref|NP_001089868.1| uncharacterized protein LOC734934 [Xenopus laevis]
gi|80476446|gb|AAI08571.1| MGC131054 protein [Xenopus laevis]
Length = 216
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/221 (53%), Positives = 148/221 (66%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M + E+E++++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ VD +
Sbjct: 1 MASEEEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTLTVDGHLV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
K+QIWDTAG ERYRAITSAYYRGAVGALLVYDI KH +YENV+RWL+EL DHAD +IV+M
Sbjct: 61 KSQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYENVDRWLKELYDHADASIVVM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK DL+
Sbjct: 121 LVG---------------------------------------------------NKCDLK 129
Query: 181 -HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ VP++EAK +AE+N L FIETSALD+TNVE AF+ IL
Sbjct: 130 DEAQEVPSEEAKAYAEQNGLLFIETSALDATNVEVAFETIL 170
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 145/220 (65%), Gaps = 51/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEFN +S++TIGVEF+TR+I V +
Sbjct: 1 MGSAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDAVV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGAL+V+DI KH TY+ V+RWL+EL DHA+ +IV+M
Sbjct: 61 KAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEASIVVM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK+DL
Sbjct: 121 LVG---------------------------------------------------NKTDLA 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EAK FA+ N L F+ETSALDSTNVE AF+ IL
Sbjct: 130 QAREVPMEEAKMFADNNGLLFVETSALDSTNVEEAFETIL 169
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 142/213 (66%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF RNEFN++SK+TIGVEF T+++ +DQK +KAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAIDQKAVKAQIWDTA 72
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML+G
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIG----- 127
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL LRAVP +
Sbjct: 128 ----------------------------------------------NKSDLGSLRAVPTE 141
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+A+ FAER NL F+ETSAL++TNVETAF +LT
Sbjct: 142 DAQEFAERENLFFMETSALEATNVETAFLTVLT 174
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 138/213 (64%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LLSRF R+EF LESKSTIGVEF TR+I VD KTIKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQIWDTA 68
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI + T+E+V RWL ELR+HAD N+VIM+VG
Sbjct: 69 GQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVG----- 123
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL + RA+ +
Sbjct: 124 ----------------------------------------------NKSDLSNSRAMSVE 137
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
E + F+E+ L F+ETSALDSTNVETAF +LT
Sbjct: 138 EGREFSEKEGLYFMETSALDSTNVETAFTTVLT 170
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 145/220 (65%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
T + DY+FK+VLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF T+++ +D KT+K
Sbjct: 7 ATYNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDHKTVK 66
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K ++++V +WL ELRDHAD NIVIML
Sbjct: 67 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIML 126
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NKSDL
Sbjct: 127 IG---------------------------------------------------NKSDLGT 135
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP ++AK FA++ NL F+ETSAL++TNVE+AF ++LT
Sbjct: 136 LRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLT 175
>gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 198
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 136/207 (65%), Gaps = 51/207 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
+VLIGDSGVGKSNLL R+T+ EFNLESKSTIGVEFAT++IQ D K IKAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKIEFNLESKSTIGVEFATKTIQYDNKNIKAQIWDTAGQDRY 60
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RA+TSAYYRGAVGALLVYD++KH TYE V++WL+ELRD AD IVIMLVG S LR
Sbjct: 61 RAVTSAYYRGAVGALLVYDVSKHSTYEGVDKWLKELRDQADPAIVIMLVGNKSDLR---- 116
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
HLR VP +EAK+F
Sbjct: 117 -----------------------------------------------HLRNVPTEEAKSF 129
Query: 194 AERNNLSFIETSALDSTNVETAFQNIL 220
A+RNNLSFIETSA STNVE AF IL
Sbjct: 130 AQRNNLSFIETSAQSSTNVEAAFNTIL 156
>gi|346464621|gb|AEO32155.1| hypothetical protein [Amblyomma maculatum]
Length = 184
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 144/220 (65%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF TR++ +D++T+K
Sbjct: 6 GEFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLAIDKRTVK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K ++++V RWL ELR HAD+NIVIML
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLNELRGHADKNIVIML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NKSDL
Sbjct: 126 IG---------------------------------------------------NKSDLGT 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP ++AK FAER NL F+ETS L+S NVE+AFQ +LT
Sbjct: 135 LRAVPTEDAKEFAERENLFFMETSVLESXNVESAFQTVLT 174
>gi|344286892|ref|XP_003415190.1| PREDICTED: ras-related protein Rab-25-like [Loxodonta africana]
Length = 213
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 143/221 (64%), Gaps = 52/221 (23%)
Query: 1 MGTR-EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEFN +S++TIGVEF+TR++ +
Sbjct: 1 MGNRKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NKSDL
Sbjct: 121 MLVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP DEA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 SQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 145/220 (65%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGK+ LL+RF+RNEF+++SK+TIGVEF T+++ +DQKT+K
Sbjct: 6 GDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK DL
Sbjct: 126 IG---------------------------------------------------NKCDLGS 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP ++A+ FAER NL F+ETSAL+STNVETAF ILT
Sbjct: 135 LRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILT 174
>gi|256071416|ref|XP_002572036.1| rab11 [Schistosoma mansoni]
gi|350645030|emb|CCD60260.1| rab11, putative [Schistosoma mansoni]
Length = 218
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 144/220 (65%), Gaps = 51/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M ++DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+S+++D +TI
Sbjct: 6 MSGKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTI 65
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAIT+AYYRGAVGALLVYDI K T+ N+E WL ELR++ + ++V+M
Sbjct: 66 KAQIWDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRNNVELDMVVM 125
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG LR
Sbjct: 126 LVGNKCDLR--------------------------------------------------- 134
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
HLR V ++AK +AER+ L F+ETSAL+ST VE AF IL
Sbjct: 135 HLRTVQTEDAKLWAERHGLFFMETSALESTGVENAFYYIL 174
>gi|412990280|emb|CCO19598.1| unknown [Bathycoccus prasinos]
Length = 212
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 146/236 (61%), Gaps = 66/236 (27%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M D+YDYLFK+VLIGDSGVGKSN+LSRFTRNEF++ESKSTIGVEFATRSI++++K +
Sbjct: 1 MSNEHDDYDYLFKIVLIGDSGVGKSNILSRFTRNEFSVESKSTIGVEFATRSIEIEKKVV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKH---------------LTYENVERW 105
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ K T+ +VE+W
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKKGTAITKEIKLISYSLETFADVEKW 120
Query: 106 LRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD 165
L ELRDHAD IVIML G
Sbjct: 121 LAELRDHADSKIVIMLTG------------------------------------------ 138
Query: 166 QNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
NK DL+HLR+V +A+ +A + +L F+ETSAL+S N++ AFQ +L+
Sbjct: 139 ---------NKCDLQHLRSVTTQDAEIYAAKEDLLFLETSALNSVNIDAAFQKVLS 185
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 141/217 (64%), Gaps = 51/217 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
+ED+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + IKAQ
Sbjct: 5 KEDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQ 64
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+MLVG
Sbjct: 65 IWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG 124
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
NKSDL R
Sbjct: 125 ---------------------------------------------------NKSDLSQAR 133
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP DEA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 134 EVPTDEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 137/213 (64%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LLSRF R+EF LESKSTIGVEF TR+I VD KTIKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQIWDTA 68
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI + T+E+V RWL ELR+HAD N+VIM+VG
Sbjct: 69 GQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVG----- 123
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL + R + +
Sbjct: 124 ----------------------------------------------NKSDLSNSRTMSVE 137
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
E + F+E+ L F+ETSALDSTNVETAF +LT
Sbjct: 138 EGREFSEKEGLYFMETSALDSTNVETAFTTVLT 170
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 116/213 (54%), Positives = 141/213 (66%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF TR++QVDQ+TIKAQIWDTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIWDTA 75
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K +++++ RWL ELR HAD+N+VIML+G
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIG----- 130
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL LR VP +
Sbjct: 131 ----------------------------------------------NKSDLGTLRVVPTE 144
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FA R +L F+ETSAL++TNVE AF+ LT
Sbjct: 145 DAKEFAARESLFFMETSALEATNVENAFRTALT 177
>gi|403214005|emb|CCK68506.1| hypothetical protein KNAG_0B00580 [Kazachstania naganishii CBS
8797]
Length = 225
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 142/216 (65%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFN+ESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K TYEN WL ELR++AD N+ + L+G S
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
D+A HL RAVP
Sbjct: 129 ----------------DLA-HL----------------------------------RAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK FA+ N L F ETSAL+S NV+ AF+ ++TA
Sbjct: 138 TDEAKNFAQENQLLFTETSALNSENVDQAFRELITA 173
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 142/216 (65%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+ DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +D K++KAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 65
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRA+TSAYYRGA+GALLVYDI K +++++ RWL ELR HAD+NIVIMLVG
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVG-- 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NKSDL RAV
Sbjct: 124 -------------------------------------------------NKSDLEEERAV 134
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+++AK FAE+ NL F+ETSAL +TNVE AFQ +LT
Sbjct: 135 SSEDAKEFAEKENLFFLETSALQATNVENAFQTVLT 170
>gi|349804351|gb|AEQ17648.1| putative member ras oncogene protein 1 [Hymenochirus curtipes]
Length = 116
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/117 (94%), Positives = 113/117 (96%), Gaps = 1/117 (0%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNI 117
KAQIWDTAGQERYRAITSAYYRGA GALLVYDIAKHLTYENVERWL+ELRDHAD NI
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGA-GALLVYDIAKHLTYENVERWLKELRDHADNNI 116
>gi|405952895|gb|EKC20651.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 234
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 145/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
EDEYDYL KVVL GDSGVGK+NLLSRFTRNEF+LES+STIGVEFATRS+ +D KT+KAQI
Sbjct: 25 EDEYDYLAKVVLTGDSGVGKTNLLSRFTRNEFSLESRSTIGVEFATRSVHIDGKTLKAQI 84
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQ+RYRAIT+AYYR AVG + VYDIAK T++N+++WL+E R+ D ++++MLVG
Sbjct: 85 WDTAGQDRYRAITNAYYRKAVGVIFVYDIAKRPTFDNLDKWLKEARNFTDDDVILMLVGN 144
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 145 KTDLR---------------------------------------------------HLRA 153
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V + EA+++AE+NN+S+IETSALD T+V+ AFQ+IL
Sbjct: 154 VSSQEARSYAEKNNMSYIETSALDCTHVDLAFQSIL 189
>gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila]
gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777772|dbj|BAJ21282.1| Rab-family small GTPase Rab11A [Tetrahymena thermophila]
Length = 230
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 144/220 (65%), Gaps = 52/220 (23%)
Query: 3 TREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
TR D+ +DY+FK+VLIGDSGVGKSNLLSRFT++EFN + K+TIGVEFATRSI D K IK
Sbjct: 2 TRNDQDHDYIFKIVLIGDSGVGKSNLLSRFTKDEFNQDQKTTIGVEFATRSIMADNKLIK 61
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERY AITSAYYRGAVGALL+YDI KH ++ N+++WL E+RDHA+ +IV+ML
Sbjct: 62 AQIWDTAGQERYVAITSAYYRGAVGALLIYDITKHSSFINIQKWLDEIRDHAEPHIVVML 121
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG S L +H
Sbjct: 122 VGNKSDL---------------------------------------------------KH 130
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LR V ++A FAE+NN++FIETSALD++NVE FQ I+T
Sbjct: 131 LRQVRQEDATAFAEKNNIAFIETSALDASNVELTFQRIIT 170
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/216 (53%), Positives = 141/216 (65%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +KAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+MLVG
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL H R
Sbjct: 125 --------------------------------------------------NKSDLSHARE 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP DEA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 135 VPTDEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/213 (54%), Positives = 141/213 (66%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF TR++QVDQ+TIKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIWDTA 74
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K +++++ RWL ELR HAD+N+VIML+G
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIG----- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL LR VP +
Sbjct: 130 ----------------------------------------------NKSDLGTLRVVPTE 143
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FA R +L F+ETSAL++TNVE AF+ LT
Sbjct: 144 DAKEFAARESLFFMETSALEATNVENAFRTALT 176
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/221 (53%), Positives = 143/221 (64%), Gaps = 52/221 (23%)
Query: 1 MGTR-EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRSEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NKSDL
Sbjct: 121 MLVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP DEA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 SQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|146414846|ref|XP_001483393.1| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 144/224 (64%), Gaps = 55/224 (24%)
Query: 1 MGTREDEY----DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD 56
MG D+Y +YL+K+VLIGD GVGKSNLLSRFTR+EFNLES+STIGVEFATR++++D
Sbjct: 1 MGDNTDDYSYDYEYLYKIVLIGDLGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEID 60
Query: 57 QKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQN 116
+ +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDI K +YE+V RWL+EL++HAD N
Sbjct: 61 GRRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDILKTESYESVSRWLKELKEHADTN 120
Query: 117 IVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 176
IVI LVG NK
Sbjct: 121 IVIELVG---------------------------------------------------NK 129
Query: 177 SDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
SDL HLRAVP +EAK FA N+L F E SAL S NV+ +F +L
Sbjct: 130 SDLDHLRAVPTEEAKLFANENSLLFTEASALSSDNVDLSFHQLL 173
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 141/221 (63%), Gaps = 52/221 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R DE Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NKSDL
Sbjct: 121 MLVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA FAE N L F+ETSALDSTNVE AFQ +L
Sbjct: 130 SQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVL 170
>gi|351722452|ref|NP_001235197.1| uncharacterized protein LOC100306448 [Glycine max]
gi|255628567|gb|ACU14628.1| unknown [Glycine max]
Length = 147
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 131/192 (68%), Gaps = 51/192 (26%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVLKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSA
Sbjct: 67 WDTAGQERYRAITSA--------------------------------------------- 81
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
YYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIV+MLVGNK+DLRHLRA
Sbjct: 82 ------YYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADLRHLRA 135
Query: 185 VPADEAKTFAER 196
V +E FAER
Sbjct: 136 VSTEETTNFAER 147
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 141/221 (63%), Gaps = 52/221 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R DE Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NKSDL
Sbjct: 121 MLVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA FAE N L F+ETSALDSTNVE AFQ +L
Sbjct: 130 SQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVL 170
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF+RNEF LESK+TIGVEF TR++ VD KTIKAQIWDTA
Sbjct: 12 DYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRAITSAYYRGAVGAL+VYDI K T+E+V RWL EL+ HAD NIV+MLVG
Sbjct: 72 GQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVG----- 126
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL +LRAV +
Sbjct: 127 ----------------------------------------------NKSDLGNLRAVSVE 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
EAK AER L F+ETSAL++TNV++AF ++LT
Sbjct: 141 EAKDLAEREELFFMETSALEATNVDSAFFSVLT 173
>gi|78714212|gb|ABB51088.1| Small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 221
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 137/207 (66%), Gaps = 51/207 (24%)
Query: 15 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYR 74
VL S + KSNLLSRFTRNEF+LESKSTIGVEFATRSIQ + K IKAQIWDTAGQERYR
Sbjct: 22 VLTVPSFLSKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYR 81
Query: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRG 134
AITSAYYRGAVGALLVYDI K +++NV+RWL+EL+DHAD NIVIMLVG
Sbjct: 82 AITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVG----------- 130
Query: 135 AVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFA 194
NKSDL+HL+AV D+A FA
Sbjct: 131 ----------------------------------------NKSDLQHLKAVTTDDASAFA 150
Query: 195 ERNNLSFIETSALDSTNVETAFQNILT 221
E N LSFIETSALD++NVE AF++IL+
Sbjct: 151 ESNGLSFIETSALDNSNVEEAFRSILS 177
>gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thaliana]
Length = 212
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 139/217 (64%), Gaps = 57/217 (26%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVL GDSGVGKSNLLSRFTRN+F+ +S++TIGVEFATRSIQ D K +KAQI
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQE SAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQE------SAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 120
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 121 KADLR---------------------------------------------------HLRA 129
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+ +EAK FAER N F+ETSAL++ NV+ AF +LT
Sbjct: 130 ISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLT 166
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF+RNEF LESK+TIGVEF TR++ VD KTIKAQIWDTA
Sbjct: 12 DYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRAITSAYYRGAVGAL+VYDI K T+E+V RWL EL+ HAD NIV+MLVG
Sbjct: 72 GQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVG----- 126
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL +LRAV +
Sbjct: 127 ----------------------------------------------NKSDLGNLRAVSVE 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
EAK AER L F+ETSAL++TNV++AF ++LT
Sbjct: 141 EAKDLAEREELFFMETSALEATNVDSAFFSVLT 173
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 141/219 (64%), Gaps = 52/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
GT ED Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +K
Sbjct: 4 GTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+ML
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 123 VG---------------------------------------------------NKSDLSQ 131
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP DEA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 132 AREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis domestica]
Length = 213
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 141/219 (64%), Gaps = 52/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
GT ED Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +K
Sbjct: 4 GTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVK 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+ML
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 123 VG---------------------------------------------------NKSDLSQ 131
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP DEA+ FAE N L FIETSALDSTNVE AF+ +L
Sbjct: 132 AREVPTDEARMFAENNGLLFIETSALDSTNVELAFETVL 170
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/221 (53%), Positives = 143/221 (64%), Gaps = 52/221 (23%)
Query: 1 MGTR-EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NKSDL
Sbjct: 121 MLVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|410927462|ref|XP_003977165.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 208
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 149/220 (67%), Gaps = 52/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ E Y+++FKVVLIG+SGVGKSNLLSR+T+NEFN +S++TIGVEF+TR+++++ TI
Sbjct: 1 MGSDE-AYNFVFKVVLIGESGVGKSNLLSRYTKNEFNHDSRTTIGVEFSTRTVELNGFTI 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDI KHLTY+++ERWL+EL +HA+ NIV+M
Sbjct: 60 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYDSMERWLKELYEHAEANIVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK+DL
Sbjct: 120 LVG---------------------------------------------------NKTDLE 128
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R+VP +EA+ FAE + L F+E+SAL+STNVE AF N+L
Sbjct: 129 LERSVPTEEARGFAENHKLLFLESSALESTNVEAAFNNVL 168
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 140/216 (64%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +KAQI
Sbjct: 6 EDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+MLVG
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL R
Sbjct: 125 --------------------------------------------------NKSDLSQARE 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 135 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 139/214 (64%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YD LFK+VLIGDSGVGKSNLLSRFT+NEFN++SKSTIGVEFATR++++D K IKAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G S
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
DL HLRAVP
Sbjct: 129 ---------------------------------------------------DLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+E+KTFA N L F ETSAL+S NV+ AF+ ++
Sbjct: 138 TEESKTFALENQLLFTETSALNSENVDKAFEELI 171
>gi|168001936|ref|XP_001753670.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695077|gb|EDQ81422.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 142/217 (65%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ DY+FKVVLIGDS VGKS LLSRF+RNEF+LESK+TIGVEF TR+I VD KTIKAQI
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTIKAQI 68
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRA+TSAYYRGAVGA+LVYDI K ++++V+RWL ELR HAD NIVIML+G
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIMLIGN 128
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL +LR
Sbjct: 129 KS---------------------------------------------------DLSNLRQ 137
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D A+ +AE+ LSF+ETSA++STNVETAF +L+
Sbjct: 138 VDTDVARVYAEKEKLSFLETSAMESTNVETAFYAVLS 174
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/221 (53%), Positives = 143/221 (64%), Gaps = 52/221 (23%)
Query: 1 MGTR-EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NKSDL
Sbjct: 121 MLVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 SQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|242044174|ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 139/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF RNEFNL+SK+TIGVEF TR++ +D +T+KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLNIDARTVKAQIWDTA 74
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K ++++V RWL ELR HAD+NIVIML+G
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIG----- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL LR+V +
Sbjct: 130 ----------------------------------------------NKSDLGTLRSVATE 143
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAER NL F+ETSAL++ NVE AF +LT
Sbjct: 144 DAKEFAERENLFFMETSALEAVNVENAFMTVLT 176
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 141/213 (66%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS +LSRF R+EF+L+SK+TIGVEF TR++ ++ K++KAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVKAQIWDTA 67
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K T+++V RWL ELR+HAD NIVIMLVG
Sbjct: 68 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVPRWLEELRNHADNNIVIMLVG----- 122
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL +LRAVP +
Sbjct: 123 ----------------------------------------------NKCDLDNLRAVPTE 136
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FA++ L F+ETSA+++TNVETAF +LT
Sbjct: 137 DAKEFAQKEGLFFLETSAMEATNVETAFLTVLT 169
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/221 (53%), Positives = 143/221 (64%), Gaps = 52/221 (23%)
Query: 1 MGTR-EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NKSDL
Sbjct: 121 MLVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 SQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/221 (53%), Positives = 141/221 (63%), Gaps = 52/221 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R DE Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NKSDL
Sbjct: 121 MLVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 SQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 143/221 (64%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M D+ DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +D +++
Sbjct: 1 MAGAGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRA+TSAYYRGA+GALLVYDI + +++++ RWL ELR HAD+NIVIM
Sbjct: 61 KAQIWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NKSDL
Sbjct: 121 LVG---------------------------------------------------NKSDLE 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAV ++AK FAE+ NL F+ETSAL +TNVE+AFQ +LT
Sbjct: 130 EQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLT 170
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/221 (53%), Positives = 143/221 (64%), Gaps = 52/221 (23%)
Query: 1 MGTR-EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NKSDL
Sbjct: 121 MLVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 SQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 143/221 (64%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M D+ DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +D +++
Sbjct: 1 MAGAGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRA+TSAYYRGA+GALLVYDI + +++++ RWL ELR HAD+NIVIM
Sbjct: 61 KAQIWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NKSDL
Sbjct: 121 LVG---------------------------------------------------NKSDLE 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAV ++AK FAE+ NL F+ETSAL +TNVE+AFQ +LT
Sbjct: 130 EQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLT 170
>gi|354459567|pdb|3RWM|B Chain B, Crystal Structure Of Ypt32 In Complex With Gppnhp
gi|354459568|pdb|3RWO|B Chain B, Crystal Structure Of Ypt32 In Complex With Gdp
gi|354459569|pdb|3RWO|A Chain A, Crystal Structure Of Ypt32 In Complex With Gdp
Length = 185
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 138/216 (63%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 6 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 65
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAG ERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G S
Sbjct: 66 TAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 125
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
DL HLRAVP
Sbjct: 126 ---------------------------------------------------DLAHLRAVP 134
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK FA N + F ETSAL+S NV+ AF+ ++ A
Sbjct: 135 TDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVA 170
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 141/217 (64%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
EDEYD+LFK+VLIGDSGVGK+NLLSRFT+NEFN++SK TIGVEFAT+++ + K IKAQI
Sbjct: 6 EDEYDFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENKYIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQE+YRAIT+AYYRGAVGAL +YDI K T++NV++WL ELR++AD NI+ ML+G
Sbjct: 66 WDTAGQEKYRAITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELREYADANIICMLIG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL+ +R
Sbjct: 125 --------------------------------------------------NKCDLQEMRQ 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++A FAE NNL+F+ETSA + NV+ AFQ ++T
Sbjct: 135 VKTEDAAKFAEENNLAFMETSAAQAINVDQAFQKLIT 171
>gi|226532614|ref|NP_001149604.1| LOC100283230 [Zea mays]
gi|195628412|gb|ACG36036.1| ras-related protein Rab11D [Zea mays]
gi|224032313|gb|ACN35232.1| unknown [Zea mays]
gi|413934318|gb|AFW68869.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 115/221 (52%), Positives = 142/221 (64%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M D+ DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ ++ K++
Sbjct: 1 MAGGGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIEHKSV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRA+TSAYYRGA+GALLVYDI K +++++ RWL ELR HAD+NIVIM
Sbjct: 61 KAQIWDTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NKSDL
Sbjct: 121 LVG---------------------------------------------------NKSDLE 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAV ++AK FAE+ NL F+ETSAL +TNVE AFQ +LT
Sbjct: 130 DERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLT 170
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 141/219 (64%), Gaps = 52/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
GT ED Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +K
Sbjct: 8 GTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 66
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+ML
Sbjct: 67 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 126
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 127 VG---------------------------------------------------NKSDLSQ 135
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 136 AREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 174
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 141/219 (64%), Gaps = 52/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
GT ED Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +K
Sbjct: 4 GTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+ML
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 123 VG---------------------------------------------------NKSDLSQ 131
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 132 AREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 141/219 (64%), Gaps = 52/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
GT ED Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +K
Sbjct: 4 GTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+ML
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 123 VG---------------------------------------------------NKSDLSQ 131
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 132 AREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FK+VLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 12 DYVFKIVLIGDSAVGKSQLLARFARNEFCVDSKATIGVEFQTKTLSIDNKTVKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD+NIVIML+G
Sbjct: 72 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIG----- 126
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL LRAVP +
Sbjct: 127 ----------------------------------------------NKCDLGSLRAVPIE 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+A+ FA+R NL F+ETSAL+STNVETAF +LT
Sbjct: 141 DAQEFAQRENLFFMETSALESTNVETAFLTVLT 173
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 141/219 (64%), Gaps = 52/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
GT ED Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +K
Sbjct: 4 GTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+ML
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 123 VG---------------------------------------------------NKSDLSQ 131
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 132 AREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 141/219 (64%), Gaps = 52/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
GT ED Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +K
Sbjct: 4 GTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+ML
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 123 VG---------------------------------------------------NKSDLSQ 131
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 132 AREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 143/221 (64%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M D+ DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +D +++
Sbjct: 1 MAGAGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRA+TSAYYRGA+GALLVYDI + +++++ RWL ELR HAD+NIVIM
Sbjct: 61 KAQIWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NKSDL
Sbjct: 121 LVG---------------------------------------------------NKSDLE 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAV ++AK FAE+ NL F+ETSAL +TNVE++FQ +LT
Sbjct: 130 EQRAVSTEDAKEFAEKENLFFLETSALQATNVESSFQTVLT 170
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 141/217 (64%), Gaps = 51/217 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
+E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +KAQ
Sbjct: 5 KEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQ 64
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+MLVG
Sbjct: 65 IWDTAGLERYRAITSAYYRGAVGALLVFDLTKHHTYAVVERWLKELYDHAEATIVVMLVG 124
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
NKSDL R
Sbjct: 125 ---------------------------------------------------NKSDLSQAR 133
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 134 EVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|254567101|ref|XP_002490661.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|238030457|emb|CAY68381.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|328351047|emb|CCA37447.1| GTP-binding protein YPT32/YPT11 [Komagataella pastoris CBS 7435]
Length = 220
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 137/216 (63%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YLFK+VL+G+S VGKSNLLSRFTR+EFN+ESK+TIGVEFATR+I+VD K IKAQIWD
Sbjct: 11 DYEYLFKIVLVGESSVGKSNLLSRFTRDEFNIESKTTIGVEFATRTIEVDGKRIKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRA+T+AYYRGAVGALLVYDI+ +YE RWL EL+DHAD NIV+ LVG S
Sbjct: 71 TAGQERYRAVTAAYYRGAVGALLVYDISNSSSYEGASRWLSELKDHADANIVVELVGNKS 130
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
L HLRAVP
Sbjct: 131 DL---------------------------------------------------NHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK+FA L F E SAL+S NVE AFQ ++ A
Sbjct: 140 TDEAKSFATEKGLLFTEASALNSENVELAFQQLIKA 175
>gi|326528455|dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 142/216 (65%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
++ DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +D K++KAQIW
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 64
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRA+TSAYYRGA+GALLVYDI K +++++ RWL ELR HAD+NI+IMLVG
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIIIMLVG-- 122
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NKSDL RAV
Sbjct: 123 -------------------------------------------------NKSDLEDERAV 133
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
++AK FAE+ NL F+ETSAL +TNVE+AFQ +L+
Sbjct: 134 STEDAKEFAEKENLFFLETSALQATNVESAFQTVLS 169
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 141/216 (65%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+ DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +D K++KAQIW
Sbjct: 5 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLLIDHKSVKAQIW 64
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRA+TSAYYRGA+GALLVYDI K +++++ RWL ELR HAD+NIVIMLVG
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVG-- 122
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NKSDL RAV
Sbjct: 123 -------------------------------------------------NKSDLEDERAV 133
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
++AK FAE+ N+ F+ETSAL +TNVE AFQ +L+
Sbjct: 134 STEDAKEFAEKENVFFLETSALQATNVENAFQTVLS 169
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 141/219 (64%), Gaps = 52/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
GT ED Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +K
Sbjct: 4 GTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVK 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+ML
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 123 VG---------------------------------------------------NKSDLSQ 131
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 132 AREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 141/217 (64%), Gaps = 51/217 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
+E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +KAQ
Sbjct: 5 KEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQ 64
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+MLVG
Sbjct: 65 IWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG 124
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
NKSDL R
Sbjct: 125 ---------------------------------------------------NKSDLSQAR 133
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 134 EVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 140/216 (64%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +KAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+MLVG
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL R
Sbjct: 125 --------------------------------------------------NKSDLSQARE 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 135 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum]
gi|738935|prf||2001457C GTP-binding protein
Length = 225
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS +L+RF+RNEF+L+SKSTIGVEF TR++ +D KT+KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 74
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR+HAD+NIVI+LVG
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVG----- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL + R VP +
Sbjct: 130 ----------------------------------------------NKSDLENQRDVPTE 143
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAE+ L F+ETSAL +TNVE +F +LT
Sbjct: 144 DAKEFAEKEGLFFLETSALQATNVEASFMTVLT 176
>gi|302309967|ref|XP_451560.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199424819|emb|CAH01953.2| KLLA0B00671p [Kluyveromyces lactis]
Length = 219
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 140/216 (64%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YD+LFK+VLIGDSGVGKSNLLSRFT NEFNL+SK+TIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDFLFKIVLIGDSGVGKSNLLSRFTANEFNLDSKTTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAIT+AYYR AVGAL+VYDI K +YEN WL EL+ +AD+N+ + L+G
Sbjct: 69 TAGQERYRAITTAYYRAAVGALIVYDITKSSSYENCNHWLAELKQNADENVAVGLIG--- 125
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL H RAVP
Sbjct: 126 ------------------------------------------------NKSDLDHKRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEA+ +A+ N L F ETSAL++ NV+ AF+ ++TA
Sbjct: 138 TDEARNYAQENQLLFTETSALNADNVDEAFRALITA 173
>gi|388522627|gb|AFK49375.1| unknown [Medicago truncatula]
Length = 225
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS +L+RF+RNEF+L+SKSTIGVEF TR++ +D KT+KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 74
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR+HAD+NIVI+LVG
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVG----- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL + R VP +
Sbjct: 130 ----------------------------------------------NKSDLENQRDVPTE 143
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAE+ L F+ETSAL +TNVE +F +LT
Sbjct: 144 DAKEFAEKEGLFFLETSALQATNVEASFMTVLT 176
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 143/220 (65%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGK+ LL+RF+RN+FN++SK+TIGVEF T+++ +D KT+K
Sbjct: 6 GDYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKTVK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD NIVIML
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK DL
Sbjct: 126 IG---------------------------------------------------NKCDLGT 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
L+AVP ++A+ FA+R NL F+ETSAL+STNVETAF ILT
Sbjct: 135 LKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILT 174
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/213 (51%), Positives = 142/213 (66%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVL+GDS VGK+ LL+RF +N+FN++SK+TIGVEF T+++ +D+KT+KAQIWDTA
Sbjct: 13 DYVFKVVLVGDSAVGKTQLLARFAKNQFNVDSKATIGVEFQTKTLIIDKKTVKAQIWDTA 72
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYD+ + +++N+ +WL ELR HAD+NIV+ML+G
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDVTRRPSFDNMAKWLEELRGHADKNIVVMLIG----- 127
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL LRAVP +
Sbjct: 128 ----------------------------------------------NKCDLGTLRAVPTE 141
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+A+ FA+R NL F+ETSAL+STNVETAF ILT
Sbjct: 142 DAEEFAQRENLFFMETSALESTNVETAFLTILT 174
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 139/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SKSTIGVEF TR++ +D KT+KAQIWDTA
Sbjct: 18 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 77
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR+HAD+NIVI+L G
Sbjct: 78 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTG----- 132
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL + R VP +
Sbjct: 133 ----------------------------------------------NKCDLENQRDVPTE 146
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAE+ L F+ETSAL++TNVETAF +LT
Sbjct: 147 DAKEFAEKEGLFFLETSALEATNVETAFITVLT 179
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 139/216 (64%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++YDYL+K+VLIG+SGVGKSNLL RFTRNEF+ E +STIGVEFATRSIQ +QK I+AQI
Sbjct: 3 QEDYDYLYKIVLIGESGVGKSNLLLRFTRNEFDPEKRSTIGVEFATRSIQHEQKVIRAQI 62
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAIT+AYYRGAVGAL+VYDI K +++++ERWL EL+D+AD IV+M+VG
Sbjct: 63 WDTAGQERYRAITNAYYRGAVGALIVYDITKESSFKSIERWLSELKDNADPKIVVMVVG- 121
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL R
Sbjct: 122 --------------------------------------------------NKADLSQTRE 131
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V AKTF E L F ETSALD TNVETAF+N+L
Sbjct: 132 VDESTAKTFCENQKLFFFETSALDGTNVETAFKNLL 167
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 141/220 (64%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +D K++K
Sbjct: 8 GDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVK 67
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR+HAD+NIVI+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIIL 127
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NKSDL
Sbjct: 128 IG---------------------------------------------------NKSDLED 136
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP ++AK FA++ L F+ETSAL +TNVE AF +LT
Sbjct: 137 QRAVPTEDAKEFAQKEGLFFLETSALQATNVENAFMTVLT 176
>gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa
Japonica Group]
gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
gi|222612729|gb|EEE50861.1| hypothetical protein OsJ_31310 [Oryza sativa Japonica Group]
Length = 216
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 141/216 (65%), Gaps = 51/216 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
++ DY+FKVVLIGDS VGKS +L+RF RNEF+++SK+TIGVEF TR++ +D K++KAQIW
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIW 64
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRA+TSAYYRGA+GALLVYDI K +++++ RWL ELR HAD+NIVIMLVG
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVG-- 122
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NKSDL RAV
Sbjct: 123 -------------------------------------------------NKSDLEDERAV 133
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
++AK FAE+ NL F+ETSAL +TNVE AFQ +L+
Sbjct: 134 STEDAKEFAEKENLFFLETSALQATNVENAFQTVLS 169
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 142/220 (64%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SKSTIGVEF TR++ +D KT+K
Sbjct: 8 GDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVK 67
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR+HAD+NIVI+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIIL 127
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK DL +
Sbjct: 128 IG---------------------------------------------------NKCDLVN 136
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
R VP ++AK FAE+ L F+ETSAL++TNVE+AF +LT
Sbjct: 137 QRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLT 176
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 139/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SKSTIGVEF TR++ +D KT+KAQIWDTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 75
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR+HAD+NIVI+L+G
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIG----- 130
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL R VP +
Sbjct: 131 ----------------------------------------------NKCDLESQRDVPTE 144
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAE+ L F+ETSAL++TNVETAF +LT
Sbjct: 145 DAKEFAEKEGLFFLETSALEATNVETAFITVLT 177
>gi|168016234|ref|XP_001760654.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688014|gb|EDQ74393.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 141/217 (64%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ DY+FKVVLIGDS VGKS LLSRF+RNEF+LESK+TIGVEF TR+I VD KTIKAQI
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTIKAQI 68
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRA+TSAYYRGAVGA++VYDI K ++++V RWL ELR HAD NIVIML+G
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMVVYDITKEQSFDHVLRWLEELRAHADANIVIMLIGN 128
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL +LR
Sbjct: 129 KS---------------------------------------------------DLSNLRQ 137
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D A+ +AE+ LSF+ETSA++STNVETAF +L+
Sbjct: 138 VETDTAREYAEKQGLSFLETSAMESTNVETAFFTVLS 174
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 143/220 (65%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGK+ LL+RF+RN+FN++SK+TIGVEF T+++ +D KT+K
Sbjct: 6 GDFNQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDSKTVK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ +WL ELR HAD NIVIML
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMAKWLEELRGHADTNIVIML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK DL
Sbjct: 126 IG---------------------------------------------------NKCDLAT 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
L+AVP ++A+ FA+R NL F+ETSAL+STNVETAF ILT
Sbjct: 135 LKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILT 174
>gi|47212961|emb|CAF93372.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 145/222 (65%), Gaps = 54/222 (24%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ +D Y++++KVVLIG+SGVGKSNLLSRFT+NEFN +S++TIGVEF+TR++Q++Q T+
Sbjct: 1 MGS-DDSYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNQYTV 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDI+KHLTYE+ ERWL+EL +HAD +IV+M
Sbjct: 60 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK DL
Sbjct: 120 LVG---------------------------------------------------NKRDLE 128
Query: 181 HLRAVPADEAKTFA--ERNNLSFIETSALDSTNVETAFQNIL 220
+LR VP++ E L F+ETSALDSTNVE AF +L
Sbjct: 129 NLRTVPSEGGPGLCRSEAKGLMFMETSALDSTNVEAAFNEVL 170
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 143/220 (65%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGK+ LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 6 GDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ +WL ELR HAD+NIVIML
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK DL
Sbjct: 126 IG---------------------------------------------------NKCDLGS 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP ++A+ FA+R NL F+ETSAL++TNVETAF ILT
Sbjct: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILT 174
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 139/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SKSTIGVEF TR++ +D KT+KAQIWDTA
Sbjct: 11 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 70
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR+HAD+NIVI+L G
Sbjct: 71 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTG----- 125
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL + R VP +
Sbjct: 126 ----------------------------------------------NKCDLENQRDVPTE 139
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAE+ L F+ETSAL++TNVETAF +LT
Sbjct: 140 DAKEFAEKEGLFFLETSALEATNVETAFITVLT 172
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 139/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FK+VLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF TR++ +D KT+KAQIWDTA
Sbjct: 13 DYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHKTVKAQIWDTA 72
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K T+++V RWL ELR HAD NIVIML+G
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHADNNIVIMLIG----- 127
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL +LRAVP +
Sbjct: 128 ----------------------------------------------NKCDLGNLRAVPIE 141
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+A+ FA+R L F+ETSAL++ NVE+AF +LT
Sbjct: 142 DAREFAQREGLFFLETSALEAINVESAFLTVLT 174
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 138/217 (63%), Gaps = 52/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFT NEFNLESKSTIGVEFAT+++++D T+KAQI
Sbjct: 2 DDEYDYLFKLVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATKNLEIDNHTVKAQI 61
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDT+GQERYRAIT AYYRGAVGALLVYDI + +++NV+ WL+ELRDHAD NIVIMLVG
Sbjct: 62 WDTSGQERYRAITGAYYRGAVGALLVYDITRQSSFQNVQHWLKELRDHADPNIVIMLVG- 120
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH-LR 183
NK DL R
Sbjct: 121 --------------------------------------------------NKVDLSESSR 130
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++ + AE+ F+ETSALD+TNV+ AF +
Sbjct: 131 QVTTEDGGSLAEQEGFLFVETSALDATNVDKAFATVF 167
>gi|356567670|ref|XP_003552040.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 223
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 142/220 (64%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K+IK
Sbjct: 8 GDANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSIK 67
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +++++ RWL ELR+HAD+NIVI+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIIL 127
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NKSDL +
Sbjct: 128 IG---------------------------------------------------NKSDLEN 136
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
R VP ++AK FAE+ L F+ETSAL++TNVETAF +LT
Sbjct: 137 QRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLT 176
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 140/220 (63%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 8 GDQSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR HAD+NIVI+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGAVGAILVYDITKRQTFDHIPRWLEELRSHADKNIVIIL 127
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NK DL
Sbjct: 128 VG---------------------------------------------------NKCDLES 136
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
R VP ++AK FA++ L F+ETSAL+STNVETAF +LT
Sbjct: 137 QRVVPTEDAKEFAQKEGLFFLETSALESTNVETAFLTVLT 176
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 141/220 (64%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGK+ LL+RF RNEF+L+SK+TIGVEF T+++ +D KTIK
Sbjct: 6 GDYHQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKTIK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HADQNIVIML
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVRWLEELRGHADQNIVIML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK DL
Sbjct: 126 IG---------------------------------------------------NKCDLGS 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP ++A+ A+R NL F+ETSAL+STNVET F ILT
Sbjct: 135 LRAVPMEDAEEVAQRENLFFMETSALESTNVETCFLTILT 174
>gi|7508981|pir||T26168 hypothetical protein W04G5.2 - Caenorhabditis elegans
Length = 212
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 143/230 (62%), Gaps = 67/230 (29%)
Query: 6 DEYDYLFK--------------VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATR 51
+EY YLFK VVLIG+ GVGKSNLLSRFTRNEFNL+SK TIGVEFAT+
Sbjct: 3 NEYYYLFKSNFIFQNFKRQIISVVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATK 62
Query: 52 SIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRD 111
I V+ K +K QIWDTAG ER+R S+YYRGA+GALLVYDI+KH TYE+VE+WL+ LRD
Sbjct: 63 IISVEGKAVKVQIWDTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRD 122
Query: 112 HADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 171
HA+++IVI LVG
Sbjct: 123 HANEDIVITLVG------------------------------------------------ 134
Query: 172 LVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
NKSDL H AVP DEAK +AERN++SFIETSALD+TNVE AF NI+T
Sbjct: 135 ---NKSDLSH--AVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVT 179
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 143/220 (65%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGK+ LL+RF +N+F+++SK+TIGVEF T+++ +D KT+K
Sbjct: 7 GEYNQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVK 66
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++N+ +WL ELR HAD+NIV+ML
Sbjct: 67 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVML 126
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK DL
Sbjct: 127 IG---------------------------------------------------NKCDLGT 135
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP ++A+ FA+R NL F+ETSAL+STNVETAF ILT
Sbjct: 136 LRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILT 175
>gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana]
Length = 224
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TR++ ++QK+IKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYD+ K T+E++ RWL ELR HAD+NIVI+L+G
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIG----- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL RAVP +
Sbjct: 130 ----------------------------------------------NKSDLEDQRAVPTE 143
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAE+ L F+ETSAL++TNVE +F ++T
Sbjct: 144 DAKEFAEKEGLFFLETSALNATNVENSFNTLMT 176
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 138/213 (64%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS +L+RF RNEF+L+SKSTIGVEF TR++ +D KT+KAQIWDTA
Sbjct: 18 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 77
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR+HAD+NIVI+L G
Sbjct: 78 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTG----- 132
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL + R VP
Sbjct: 133 ----------------------------------------------NKCDLENQRDVPTG 146
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAE+ L F+ETSAL++TNVETAF +LT
Sbjct: 147 DAKEFAEKEGLFFLETSALEATNVETAFITVLT 179
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 139/215 (64%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +KAQIW
Sbjct: 20 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 79
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+MLVG
Sbjct: 80 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG-- 137
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NKSDL R V
Sbjct: 138 -------------------------------------------------NKSDLSQAREV 148
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
P +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 149 PTEEARMFAENNGLLFLETSALDSTNVELAFETVL 183
>gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana]
Length = 224
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TR++ ++QK+IKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYD+ K T+E++ RWL ELR HAD+NIVI+L+G
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIG----- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL RAVP +
Sbjct: 130 ----------------------------------------------NKSDLEDQRAVPTE 143
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAE+ L F+ETSAL++TNVE +F ++T
Sbjct: 144 DAKEFAEKEGLFFLETSALNATNVENSFNTLMT 176
>gi|449451415|ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
Length = 226
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 140/220 (63%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 8 GDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGA+GA+LVYDI K T++++ RWL ELR HAD+NIVI+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIIL 127
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NKSDL
Sbjct: 128 IG---------------------------------------------------NKSDLED 136
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP ++AK FAE+ L F+ETSAL+STNVE AF +LT
Sbjct: 137 QRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLT 176
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 141/221 (63%), Gaps = 52/221 (23%)
Query: 1 MGTR-EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG S DL
Sbjct: 121 MLVGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 HQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|20356|emb|CAA41966.1| GTP-binding protein [Oryza sativa]
gi|228209|prf||1718315A GTP-binding protein
Length = 226
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 137/213 (64%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+ F RNEFNL+SK+TIGVEF TR++ +D +T+KAQ DTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQLLAGFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQTRDTA 75
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K ++++V RWL ELR HAD+NIVIML+G
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIG----- 130
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL LR VP +
Sbjct: 131 ----------------------------------------------NKSDLGTLRVVPTE 144
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAER NL F+ETSAL+STN+E AF +LT
Sbjct: 145 DAKEFAERENLFFMETSALESTNLENAFMTVLT 177
>gi|6321228|ref|NP_011305.1| Ypt32p [Saccharomyces cerevisiae S288c]
gi|1730881|sp|P51996.3|YPT32_YEAST RecName: Full=GTP-binding protein YPT32/YPT11; AltName: Full=Rab
GTPase YPT32
gi|927543|emb|CAA51355.1| Ypt32p [Saccharomyces cerevisiae]
gi|1322850|emb|CAA96926.1| YPT32 [Saccharomyces cerevisiae]
gi|1655723|gb|AAC49495.1| ras-like GTPase [Saccharomyces cerevisiae]
gi|45270902|gb|AAS56832.1| YGL210W [Saccharomyces cerevisiae]
gi|151943607|gb|EDN61917.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|190407147|gb|EDV10414.1| GTP-binding protein YPT32/YPT11 [Saccharomyces cerevisiae RM11-1a]
gi|256269382|gb|EEU04680.1| Ypt32p [Saccharomyces cerevisiae JAY291]
gi|285812006|tpg|DAA07906.1| TPA: Ypt32p [Saccharomyces cerevisiae S288c]
gi|323305067|gb|EGA58820.1| Ypt32p [Saccharomyces cerevisiae FostersB]
gi|323333611|gb|EGA75004.1| Ypt32p [Saccharomyces cerevisiae AWRI796]
gi|323337752|gb|EGA78996.1| Ypt32p [Saccharomyces cerevisiae Vin13]
gi|323355135|gb|EGA86964.1| Ypt32p [Saccharomyces cerevisiae VL3]
gi|349578025|dbj|GAA23191.1| K7_Ypt32p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765748|gb|EHN07254.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299532|gb|EIW10626.1| Ypt32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 222
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 140/216 (64%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G S
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
D+A HL RAVP
Sbjct: 129 ----------------DLA-HL----------------------------------RAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK FA N + F ETSAL+S NV+ AF+ ++ A
Sbjct: 138 TDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVA 173
>gi|357463299|ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
gi|355490979|gb|AES72182.1| GTP-binding protein [Medicago truncatula]
gi|388518511|gb|AFK47317.1| unknown [Medicago truncatula]
Length = 222
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 142/220 (64%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+RF RN+F+++SK+TIGVEF TR++ ++ K++K
Sbjct: 7 GDANQKIDYVFKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSVK 66
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +++++ RWL ELR+HAD+NIVI+L
Sbjct: 67 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIVIIL 126
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NKSDL
Sbjct: 127 IG---------------------------------------------------NKSDLEE 135
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP ++AK FAE+ L F+ETSAL +TNVETAF +LT
Sbjct: 136 QRAVPTEDAKEFAEKEGLFFLETSALQATNVETAFMTVLT 175
>gi|15236099|ref|NP_195709.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
gi|75337421|sp|Q9SMQ6.1|RAA4B_ARATH RecName: Full=Ras-related protein RABA4b; Short=AtRABA4b; AltName:
Full=Ras-related protein GB3; Short=AtGB3; AltName:
Full=Ras-related protein Rab11G; Short=AtRab11G
gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|332661750|gb|AEE87150.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
Length = 224
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TR++ ++QK+IKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYD+ K T+E++ RWL ELR HAD+NIVI+L+G
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIG----- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL RAVP +
Sbjct: 130 ----------------------------------------------NKSDLEDQRAVPTE 143
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAE+ L F+ETSAL++TNVE +F ++T
Sbjct: 144 DAKEFAEKEGLFFLETSALNATNVENSFNTLMT 176
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 142/220 (64%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 8 GDANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +++++ RWL ELR+HAD+NIVI+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIIL 127
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NKSDL +
Sbjct: 128 IG---------------------------------------------------NKSDLEN 136
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
R VP ++AK FAE+ L F+ETSAL++TNVETAF +LT
Sbjct: 137 QRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLT 176
>gi|297798036|ref|XP_002866902.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
gi|297312738|gb|EFH43161.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TR++ ++QK+IKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYD+ K T+E++ RWL ELR HAD+NIVI+L+G
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIG----- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL RAVP +
Sbjct: 130 ----------------------------------------------NKSDLEDQRAVPTE 143
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAE+ L F+ETSAL++TNVE +F ++T
Sbjct: 144 DAKEFAEKEGLFFLETSALNATNVENSFNTLMT 176
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 143/219 (65%), Gaps = 51/219 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
+++E+D++FK+VLIGDS VGKSNLLSRFT+++F + K+TIGVEFATRSI D K IKAQ
Sbjct: 6 KDEEHDFIFKIVLIGDSNVGKSNLLSRFTKDQFFQDQKTTIGVEFATRSIITDNKLIKAQ 65
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERY++IT+AYYRGAVGALL+YDI K+L++ N+++WL E+RDHA+ +IVIMLVG
Sbjct: 66 IWDTAGQERYKSITTAYYRGAVGALLIYDITKYLSFTNIQKWLNEIRDHAEPHIVIMLVG 125
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S DL+HLR
Sbjct: 126 NKS---------------------------------------------------DLKHLR 134
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
V +EA FAE NN++FIE SALDS+NVE +F ++T
Sbjct: 135 QVKQEEATLFAENNNIAFIEASALDSSNVELSFYRLITG 173
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 115/221 (52%), Positives = 142/221 (64%), Gaps = 52/221 (23%)
Query: 1 MGTR-EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG S DL
Sbjct: 121 MLVGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 QQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 142/223 (63%), Gaps = 54/223 (24%)
Query: 1 MGTRED---EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQ 57
M + ED +YDYLFK+VLIGDSGVGKSNLLSRFT NEFNLESKSTIGVEFATR+I+V+
Sbjct: 1 MNSSEDYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVED 60
Query: 58 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNI 117
K IKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDI+K TYEN WL EL+++AD N+
Sbjct: 61 KKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLTELKENADDNV 120
Query: 118 VIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKS 177
I L+G S L +HL
Sbjct: 121 AIGLIGNKSDL-----------------EHL----------------------------- 134
Query: 178 DLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
RAVP +EA+ FA N L F ETSAL+S NV+ AF+ ++
Sbjct: 135 -----RAVPTEEARGFASENQLFFTETSALNSENVDLAFRELI 172
>gi|356537347|ref|XP_003537189.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 310
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 143/220 (65%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGK+ LL+RF +N+F+++SK+TIGVEF T+++ +D KT+K
Sbjct: 92 GEYNQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVK 151
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++N+ +WL ELR HAD+NIV+ML
Sbjct: 152 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVML 211
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK DL
Sbjct: 212 IG---------------------------------------------------NKCDLGT 220
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP ++A+ FA+R NL F+ETSAL+STNVETAF ILT
Sbjct: 221 LRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILT 260
>gi|217071438|gb|ACJ84079.1| unknown [Medicago truncatula]
Length = 225
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 139/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS +L+RF+ NEF+L+SKSTIGVEF TR++ +D KT+KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFSGNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 74
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR+HAD+NIVI+LVG
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVG----- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL + R VP +
Sbjct: 130 ----------------------------------------------NKSDLENQRDVPTE 143
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAE+ L F+ETSAL +TNVE +F +LT
Sbjct: 144 DAKEFAEKEGLFFLETSALQATNVEASFMTVLT 176
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 137/213 (64%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF RN+FNL+SK+TIGVEF TR++ +D + +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWDTA 74
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K ++++V RWL ELR HAD+NIVIML+G S
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKS-- 132
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
DL LRAVP +
Sbjct: 133 -------------------------------------------------DLGTLRAVPIE 143
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAER NL F+ETSAL++ NVE AF +LT
Sbjct: 144 DAKEFAERENLFFMETSALEAINVENAFMTVLT 176
>gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berghei strain ANKA]
gi|56500982|emb|CAH98214.1| small GTPase Rab11, putative [Plasmodium berghei]
Length = 209
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 140/214 (65%), Gaps = 52/214 (24%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKTIKAQIWD 66
+ + + VVLIGDSGVGKSNLLSRFTR+EFNLESKSTIGVEFAT+SIQ+ + K IKAQIWD
Sbjct: 1 FSFFYLVVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWD 60
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGALLVYDI K T+EN+E+WL+ELRD+AD NIVI+LVG S
Sbjct: 61 TAGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKS 120
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
L +HLR +
Sbjct: 121 DL---------------------------------------------------KHLRVIN 129
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
++A FA++ L+FIETSAL++TNVE AF +L
Sbjct: 130 DNDATQFAKKEKLAFIETSALEATNVELAFHQLL 163
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 143/219 (65%), Gaps = 51/219 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M E++YDYLFK+V+IGDSGVGK+N+LSRFT++EF++ESK TIGVEFAT+++ D K I
Sbjct: 1 MQRPEEDYDYLFKIVIIGDSGVGKTNILSRFTKDEFSIESKPTIGVEFATKTVLNDNKLI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQE+YRAIT+AYYRGAVGAL ++DI K T++N+++WL EL+++AD NIVIM
Sbjct: 61 KAQIWDTAGQEKYRAITNAYYRGAVGALTLFDITKQNTFDNLQKWLNELKENADPNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK DL
Sbjct: 121 LVG---------------------------------------------------NKCDLN 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNI 219
RAV ++A FAERN L++IETSALDSTNV+ AFQ +
Sbjct: 130 ENRAVKTEDASAFAERNQLAYIETSALDSTNVDEAFQRV 168
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FK+VLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+++ + KT+KAQIWDTA
Sbjct: 12 DYVFKIVLIGDSAVGKSQLLARFARNEFTVDSKATIGVEFQTKTLAMHNKTVKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD++I+IML+G
Sbjct: 72 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKSIIIMLIG----- 126
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL LRAVPA+
Sbjct: 127 ----------------------------------------------NKCDLGSLRAVPAE 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FA+R NL F+ETSAL++TNVETAF +LT
Sbjct: 141 DAKEFAQRENLFFMETSALEATNVETAFLTMLT 173
>gi|258571595|ref|XP_002544601.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
gi|237904871|gb|EEP79272.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
Length = 203
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 135/209 (64%), Gaps = 56/209 (26%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQER 72
++VLIGDSGVGKSNLLSRFTRNEFNL+SKSTIGVEFATRSIQVD KTIK+QIWDTAGQER
Sbjct: 31 EIVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQER 90
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYY 132
YRAITSAYYRGAVGALLVYDI+KH TYENV RWL+ELRDHAD NIVIMLVG S LR
Sbjct: 91 YRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLR--- 147
Query: 133 RGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKT 192
HLRAVP +EAK
Sbjct: 148 ------------------------------------------------HLRAVPTEEAKQ 159
Query: 193 FAERNNLSFIETSALDSTNVETAFQNILT 221
FA+ + + ALDS + + QN L+
Sbjct: 160 FAK--IFRIVSSKALDSGD---SAQNPLS 183
>gi|259146304|emb|CAY79561.1| Ypt32p [Saccharomyces cerevisiae EC1118]
Length = 222
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 140/216 (64%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G S
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
D+A HL RAVP
Sbjct: 129 ----------------DLA-HL----------------------------------RAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK FA N + F +TSAL+S NV+ AF+ ++ A
Sbjct: 138 TDEAKNFAMENQMLFTDTSALNSDNVDKAFRELIVA 173
>gi|401625852|gb|EJS43840.1| ypt32p [Saccharomyces arboricola H-6]
Length = 222
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 140/216 (64%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G S
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
D+A HL RAVP
Sbjct: 129 ----------------DLA-HL----------------------------------RAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEA+ FA N + F ETSAL+S NV+ AF+ ++ A
Sbjct: 138 TDEARNFAMENQMLFTETSALNSDNVDKAFRELIVA 173
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 140/220 (63%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGK+ LL+RF RNEF+L+SK+TIGVEF T+++ +D K IK
Sbjct: 6 GDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKIIK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ +WL ELR HADQNIVIML
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVKWLEELRGHADQNIVIML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK DL
Sbjct: 126 IG---------------------------------------------------NKCDLGS 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP ++A+ A+R NL F+ETSAL+STNVET F ILT
Sbjct: 135 LRAVPMEDAEELAQRENLFFMETSALESTNVETCFLTILT 174
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 139/221 (62%), Gaps = 52/221 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG +DE Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNGKDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG S DL
Sbjct: 121 MLVGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA FAE N L F+ETSALDSTNVE AFQ +L
Sbjct: 130 SQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVL 170
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/213 (51%), Positives = 139/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FK+VLIGDS VGKS L+RF RNEFN +SK+TIGVEF T+++ +D KT+KAQIWDTA
Sbjct: 12 DYVFKIVLIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAMDNKTVKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYD+ K +++++ RWL ELR HAD++I+IML+G
Sbjct: 72 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHLARWLEELRGHADKSIIIMLIG----- 126
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL LRAVP +
Sbjct: 127 ----------------------------------------------NKCDLGSLRAVPTE 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+A+ FA+R NL F+ETSAL++TNVETAF +LT
Sbjct: 141 DAEEFAQRENLFFMETSALEATNVETAFWTVLT 173
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 141/216 (65%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+Y+YLFK+VLIGDS VGK+NLLSRFTR+EFN +S++TIGVEFATR+++++ K IKAQIWD
Sbjct: 11 DYEYLFKIVLIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEINGKRIKAQIWD 70
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAIT+AYYRGAVGAL+VYDI+ +YE+V RWL+E+++HAD NIVI LVG
Sbjct: 71 TAGQERYRAITAAYYRGAVGALVVYDISNSDSYESVSRWLKEMKEHADANIVIALVG--- 127
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 128 ------------------------------------------------NKSDLEHLRAVP 139
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+EA+ FA +NL F E SAL++ NVE F ++ +
Sbjct: 140 TEEARNFAAEHNLLFTEASALNADNVEFTFHQLIKS 175
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 145/220 (65%), Gaps = 51/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M R ++YD L+K+VLIGDSGVGK+N+L++FTR EF +SK+TIGVEFA+++I +D KT+
Sbjct: 1 MQHRTEDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGA+++YDI K LT+ENV++W++EL+++AD ++ IM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
+VG NK+D +
Sbjct: 121 IVG---------------------------------------------------NKTDQK 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
H+R V D A +A+RN ++FIETSA D TNVE AF+NIL
Sbjct: 130 HIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNIL 169
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 139/219 (63%), Gaps = 51/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G+ ++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +K
Sbjct: 1 GSHMEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 60
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+ML
Sbjct: 61 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 120
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG S DL
Sbjct: 121 VGNKS---------------------------------------------------DLSQ 129
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 AREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 168
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 140/220 (63%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 8 GDSSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +++++ RWL ELR HAD+NIVI+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIIL 127
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK+DL
Sbjct: 128 IG---------------------------------------------------NKTDLEE 136
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP ++AK FAE+ L F+ETSAL++TNVE AF +LT
Sbjct: 137 QRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLT 176
>gi|224083598|ref|XP_002307071.1| predicted protein [Populus trichocarpa]
gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa]
gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 139/220 (63%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +D K++K
Sbjct: 8 GDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVK 67
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR HAD+NIVI+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIIL 127
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NKSDL
Sbjct: 128 IG---------------------------------------------------NKSDLED 136
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP ++ FA++ L F+ETSAL +TNVE+AF +LT
Sbjct: 137 QRAVPTEDVNEFAQKEGLFFLETSALQATNVESAFMTLLT 176
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 140/220 (63%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 6 GDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR HAD+NIVIML
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK+DL
Sbjct: 126 IG---------------------------------------------------NKTDLED 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP ++AK FA++ L F+ETSA+++TNVE AF +LT
Sbjct: 135 QRAVPTEDAKEFAQKEGLFFLETSAMEATNVEDAFLTVLT 174
>gi|361128636|gb|EHL00566.1| putative Ras-related protein Rab-11B [Glarea lozoyensis 74030]
Length = 149
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 117/188 (62%), Positives = 124/188 (65%), Gaps = 51/188 (27%)
Query: 35 EFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA 94
+FNL+SKSTIGVEFATRSIQVD KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+
Sbjct: 6 KFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIS 65
Query: 95 KHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVE 154
KH TYENV RWL+ELRDHAD NIVIMLVG S LR
Sbjct: 66 KHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLR------------------------- 100
Query: 155 RWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVET 214
HLRAVP +EAK FA NNLSFIETSALD++NVE
Sbjct: 101 --------------------------HLRAVPTEEAKQFASENNLSFIETSALDASNVEL 134
Query: 215 AFQNILTA 222
AFQNILT
Sbjct: 135 AFQNILTG 142
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 139/219 (63%), Gaps = 52/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
GT ED Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + IK
Sbjct: 4 GTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIK 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+ML
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVML 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG S L R
Sbjct: 123 VGNKSDLSR--------------------------------------------------- 131
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 132 AREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>gi|297741822|emb|CBI33135.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 140/220 (63%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 8 GDSSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 67
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +++++ RWL ELR HAD+NIVI+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIIL 127
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK+DL
Sbjct: 128 IG---------------------------------------------------NKTDLEE 136
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP ++AK FAE+ L F+ETSAL++TNVE AF +LT
Sbjct: 137 QRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLT 176
>gi|226531496|ref|NP_001146862.1| LOC100280470 [Zea mays]
gi|195604390|gb|ACG24025.1| ras-related protein RGP1 [Zea mays]
Length = 226
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 136/213 (63%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS GKS LL+RF RN+FNL+SK+TIGVEF TR++ +D + +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAGGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWDTA 74
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K ++++V RWL ELR HAD+NIVIML+G S
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKS-- 132
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
DL LRAVP +
Sbjct: 133 -------------------------------------------------DLGTLRAVPIE 143
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAER NL F+ETSAL++ NVE AF +LT
Sbjct: 144 DAKEFAERENLFFMETSALEAINVENAFMTVLT 176
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 140/218 (64%), Gaps = 52/218 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T+ED YD+L+K+VLIG+SGVGKSNLL RFTRNEF+ E +STIGVEFATRSIQ + K I+A
Sbjct: 26 TQED-YDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRA 84
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAIT+AYYRGAVGAL+VYDI K T++++ERWL EL+D+AD IVIM++
Sbjct: 85 QIWDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMII 144
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NK+DL
Sbjct: 145 G---------------------------------------------------NKADLAQT 153
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R + AK F ++ NL F ETSALD TNVETAF+++L
Sbjct: 154 REIEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLL 191
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 140/220 (63%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 6 GDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR HAD+NIVIML
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK+DL
Sbjct: 126 IG---------------------------------------------------NKTDLED 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP ++AK FA++ L F+ETSA+++TN+E AF +LT
Sbjct: 135 QRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLT 174
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 139/216 (64%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E++YD+L+K+VLIG+SGVGKSNLL RFTRNEF+ E +STIGVEFATRSIQ + K I+AQI
Sbjct: 2 EEDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQI 61
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAIT+AYYRGAVGAL+VYDI K T++++ERWL EL+D+AD IVIM++G
Sbjct: 62 WDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIG- 120
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL R
Sbjct: 121 --------------------------------------------------NKADLAQTRE 130
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V AK F ++ NL F ETSALD TNVETAF+++L
Sbjct: 131 VEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLL 166
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 140/218 (64%), Gaps = 52/218 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T+ED YD+L+K+VLIG+SGVGKSNLL RFTRNEF+ E +STIGVEFATRSIQ + K I+A
Sbjct: 2 TQED-YDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRA 60
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAIT+AYYRGAVGAL+VYDI K T++++ERWL EL+D+AD IVIM++
Sbjct: 61 QIWDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMII 120
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NK+DL
Sbjct: 121 G---------------------------------------------------NKADLAQT 129
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V AK F ++ NL F ETSALD TNVETAF+++L
Sbjct: 130 REVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLL 167
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/218 (52%), Positives = 140/218 (64%), Gaps = 52/218 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T+ED YD+L+K+VLIG+SGVGKSNLL RFTRNEF+ E +STIGVEFATRSIQ + K I+A
Sbjct: 2 TQED-YDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRA 60
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAIT+AYYRGAVGAL+VYDI K T++++ERWL EL+D+AD IVIM++
Sbjct: 61 QIWDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMII 120
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NK+DL
Sbjct: 121 G---------------------------------------------------NKADLAQT 129
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V AK F ++ NL F ETSALD TNVETAF+++L
Sbjct: 130 REVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLL 167
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 145/220 (65%), Gaps = 51/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M R ++YD L+K+VLIGDSGVGK+N+L++FTR EF +SK+TIGVEFA++++ +D KTI
Sbjct: 1 MQHRTEDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGA+++YDI K LT+ENV++W++EL+++AD ++ IM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
+VG NK+D +
Sbjct: 121 IVG---------------------------------------------------NKTDQK 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
H+R V D A +A+RN ++FIETSA D TNVE AF+NIL
Sbjct: 130 HIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNIL 169
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 140/218 (64%), Gaps = 51/218 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
+E+E +YLFK+V+IGDS VGKSNLL+RFTRNEF ++K+TIGV+F T+SI++D KTI AQ
Sbjct: 3 QEEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQ 62
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
WDTAGQER+RA+TS YYRGAVGA++VYDI ++++NV RWL ELR+ A+Q+I+IM+VG
Sbjct: 63 CWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVG 122
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
NKSDL R
Sbjct: 123 ---------------------------------------------------NKSDLEMSR 131
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP EA+ FAE N +SF+ETSAL+STNV +F+ +LT
Sbjct: 132 EVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLT 169
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 140/220 (63%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FK+VLIGDSGVGKS +LSR+ RNEF+L+SK+TIGVEF TR++ +D K++K
Sbjct: 7 GDPSQKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDHKSVK 66
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ + T++++ RWL ELR HAD+NIVI+L
Sbjct: 67 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGHADKNIVIIL 126
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 127 VG---------------------------------------------------NKSDLED 135
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RA+ ++AK FAE L F+ETSAL++ NVETAF +LT
Sbjct: 136 QRAISTEDAKEFAETEGLFFLETSALNAVNVETAFSTVLT 175
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 141/220 (64%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+R+ R+EF+L+SK+TIGVEF TR++ +D K++K
Sbjct: 8 GDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVK 67
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI + T++++ RWL ELR HAD+NIVI+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIIL 127
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NKSDL
Sbjct: 128 IG---------------------------------------------------NKSDLVD 136
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RA+P ++AK FAE+ L F+ETSA ++TNVE+AF +LT
Sbjct: 137 QRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLT 176
>gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum]
gi|226466852|emb|CAX69561.1| Ras-related protein Rab-11A [Schistosoma japonicum]
Length = 213
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 140/220 (63%), Gaps = 51/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M T++ + LFK+VLIGDSGVGK+NL SRFT EFNLESKSTIGV+FAT+++ +D K +
Sbjct: 1 MITKDPQLGLLFKIVLIGDSGVGKTNLRSRFTNQEFNLESKSTIGVDFATKNVVIDGKVV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K T+ N++RWL ELR++A ++VIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKPDTFLNLDRWLDELREYASDDVVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG NK DL+
Sbjct: 121 LVG---------------------------------------------------NKCDLK 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
HLR V ++AK FAE+ +SF+ETSAL++ NVE AF L
Sbjct: 130 HLRCVLTEDAKLFAEQQGMSFMETSALNAFNVEEAFCQTL 169
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 141/215 (65%), Gaps = 51/215 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
E D+L K+VLIGDSGVGK+NLLSRF R++FN +SKSTIGVEFAT++++++ KT+KAQIWD
Sbjct: 5 EPDFLLKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGKTVKAQIWD 64
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGA+GALL+YDI LT+ ++ RWL+ELR++AD NIV+MLVG
Sbjct: 65 TAGQERYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIVVMLVG--- 121
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL+ LRAV
Sbjct: 122 ------------------------------------------------NKSDLQELRAVS 133
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
++ F+++ NL FIETSA ++TNV+ AF ++T
Sbjct: 134 TEDGTGFSQQENLLFIETSARNATNVQEAFTTLIT 168
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 137/217 (63%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+E +YLFK+V+IGDS VGKSNLL+RFTRNEF ++K+TIGV+F T+SI++D K I AQ
Sbjct: 3 EEESEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKIITAQC 62
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TS YYRGAVGA++VYDI ++++NV RWL ELR+ A+ +I+IM+VG
Sbjct: 63 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDILIMMVG- 121
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL R
Sbjct: 122 --------------------------------------------------NKSDLEMSRE 131
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP EAK FAE N +SF+ETSAL+STNV AF+ +LT
Sbjct: 132 VPTKEAKAFAESNKISFLETSALNSTNVNQAFETLLT 168
>gi|345311553|ref|XP_001505470.2| PREDICTED: ras-related protein Rab-11B-like [Ornithorhynchus
anatinus]
Length = 165
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/109 (94%), Positives = 105/109 (96%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDTAGQE
Sbjct: 9 LSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 68
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVI+
Sbjct: 69 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVII 117
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/215 (50%), Positives = 138/215 (64%), Gaps = 51/215 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
E DYL K+VLIGDSGVGK+NLL+RFTR++FN ESKSTIGVEFA++++Q++ KTIKAQIWD
Sbjct: 5 EPDYLLKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWD 64
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGA+GALL+YDI LT+ ++E+WL+ELR++AD+ I++MLVG
Sbjct: 65 TAGQERYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENADEKIIVMLVG--- 121
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NK DL RAV
Sbjct: 122 ------------------------------------------------NKCDLSEQRAVT 133
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+ A FA+ NL FIETSA ++TNV AFQ ++
Sbjct: 134 SANALEFAKAQNLLFIETSAREATNVNEAFQTLIC 168
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/213 (51%), Positives = 137/213 (64%), Gaps = 51/213 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
+DYLFK V++GDSGVGK+N+LSRFTRNEF+++SKSTIGV+FAT+ I VD K +KAQ+WDT
Sbjct: 7 HDYLFKTVIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINVDNKVVKAQLWDT 66
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQ+RYRAIT+AYYRGAVGALLVYDI + TY+N+ RWL+ELRD AD N VIMLVG S
Sbjct: 67 AGQDRYRAITAAYYRGAVGALLVYDITRRGTYDNLLRWLKELRDFADTNAVIMLVGNKSD 126
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
L +H+RAV
Sbjct: 127 L---------------------------------------------------KHIRAVST 135
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+EA F+ + LSF+ETSALDS+NV+ AF ++
Sbjct: 136 EEAAAFSAEHGLSFLETSALDSSNVDEAFNTVV 168
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 142/220 (64%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FK+VLIGDSGVGKS +LSR+ RNEF+L+SK+TIGVEF TR++ +D K++K
Sbjct: 8 GDPSQKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVIDHKSVK 67
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ + T++++ RWL ELR++AD+NIVI+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRNNADKNIVIIL 127
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 128 VG---------------------------------------------------NKSDLED 136
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RA+ ++AK FAE+ L F+ETSAL++ NVE+AF +LT
Sbjct: 137 QRAISMEDAKDFAEKEGLFFLETSALNAVNVESAFSTVLT 176
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 137/220 (62%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVV+IGDS VGKS +LSRF +NEF+L+SKSTIGVEF TR+I +D KTIK
Sbjct: 6 GDYDQRIDYMFKVVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAIDNKTIK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
QIWDTAGQERYRA+TSAYYRGA+GA+LVYDI K ++++V RWL ELR HAD NIVIML
Sbjct: 66 TQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWLEELRGHADNNIVIML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G +LRD
Sbjct: 126 IGNKC--------------------------------DLRD------------------- 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+RAVP ++AK FA+R L F ETSAL++ NVETAF LT
Sbjct: 135 MRAVPEEDAKEFAQREGLFFFETSALEAINVETAFITALT 174
>gi|225678958|gb|EEH17242.1| GTP-binding protein yptV1 [Paracoccidioides brasiliensis Pb03]
Length = 222
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 121/228 (53%), Positives = 136/228 (59%), Gaps = 63/228 (27%)
Query: 6 DEYDYLFKVVL--------IGDSGVGKSNLL----SRFTRNEFNLESKSTIGVEFATRSI 53
DEYD+LFK + S + S ++ RFTRNEFNL+SKSTIGVEFATRSI
Sbjct: 4 DEYDFLFKGISPAKFCEGSTAPSTIHTSQIILPMKYRFTRNEFNLDSKSTIGVEFATRSI 63
Query: 54 QVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHA 113
QVD KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYD K T+ N ERWL+ELR+HA
Sbjct: 64 QVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHA 123
Query: 114 DQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 173
D+NIVIMLVG
Sbjct: 124 DKNIVIMLVG-------------------------------------------------- 133
Query: 174 GNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
NK D +H+R V +A FA+ LSFIETSALD+TNVE AFQNILT
Sbjct: 134 -NKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILT 180
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 136/218 (62%), Gaps = 52/218 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKTIKA 62
+E+E+DYLFK+VL+GDSGVGKSNLL RFTRNEF+L+SKSTIGVEFAT++I + D K +KA
Sbjct: 5 KEEEHDYLFKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLEDGKVVKA 64
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERY+AIT+AYYRGA GALLVYDI + + EN+ RWLRELR+H D +V+MLV
Sbjct: 65 QIWDTAGQERYKAITAAYYRGAFGALLVYDITQRASLENIPRWLRELREHVDNQMVVMLV 124
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G LR HL
Sbjct: 125 GNKCDLR---------------------------------------------------HL 133
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V ++ K AE L F+ETSALDSTNVE AF ++
Sbjct: 134 RQVEIEQGKKLAEEEGLLFLETSALDSTNVEEAFTQLI 171
>gi|168056370|ref|XP_001780193.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162668343|gb|EDQ54952.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/212 (51%), Positives = 136/212 (64%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFKVVLIGDS VGKSNLLSR+ RNEFNL SK+TIGVEF T+S+++D K IKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIDGKEIKAQIWDTA 69
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI++ T++NV RWL ELR H+D ++V+MLVG
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRKGTFDNVGRWLDELRVHSDASVVVMLVG----- 124
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R V +
Sbjct: 125 ----------------------------------------------NKCDLDNIREVSQE 138
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
EA A+ +SFIETSA+D+TNV AFQ+++
Sbjct: 139 EATLLAQNEKMSFIETSAMDATNVTNAFQSVV 170
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 141/220 (64%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+R+ R+EF+L+SK+TIGVEF TR++ +D K++K
Sbjct: 8 GDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVK 67
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI + T++++ RWL ELR HAD+NIVI+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIIL 127
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NKSDL
Sbjct: 128 IG---------------------------------------------------NKSDLVD 136
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RA+P ++A+ FAE+ L F+ETSA ++TNVE+AF +L+
Sbjct: 137 QRAIPTEDAREFAEKEGLFFLETSAFNATNVESAFSTVLS 176
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 140/220 (63%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G ++ DY+FK+V+ GDSGVGKS LL+RF +NEF+++SK TIGVEF TR++ +D K +K
Sbjct: 6 GNADEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERY+AIT+AYYRGA GALL YDI K T+++VE+WL ELR HAD+NI++ML
Sbjct: 66 AQIWDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 126 VG---------------------------------------------------NKSDLSS 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP + A+ FA++ L F+ETSALDS+NVE+AF +L+
Sbjct: 135 LRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLS 174
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 138/222 (62%), Gaps = 53/222 (23%)
Query: 1 MGTREDE--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK 58
M + EDE +YLFK+V+IGDS VGKSNLLSR+ RNEFN+ SK+TIGVEF T+S+++D K
Sbjct: 1 MSSSEDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQSLEIDSK 60
Query: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI + T+++V RWL EL+ H D +
Sbjct: 61 EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSVSRWLDELKTHCDTTVA 120
Query: 119 IMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
+MLVG NK D
Sbjct: 121 MMLVG---------------------------------------------------NKCD 129
Query: 179 LRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
L ++RAV +E K+ AE L F+ETSALDSTNV TAF+ ++
Sbjct: 130 LENIRAVSIEEGKSLAEAQGLFFMETSALDSTNVRTAFEMVI 171
>gi|312377320|gb|EFR24177.1| hypothetical protein AND_11405 [Anopheles darlingi]
Length = 1044
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 112/167 (67%), Positives = 112/167 (67%), Gaps = 51/167 (30%)
Query: 55 VDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD 114
VD KTIKAQIWDTAGQERYRAITSA
Sbjct: 6 VDGKTIKAQIWDTAGQERYRAITSA----------------------------------- 30
Query: 115 QNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 174
YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG
Sbjct: 31 ----------------YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 74
Query: 175 NKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
NKSDLRHLRAVP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 75 NKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILT 121
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 138/222 (62%), Gaps = 53/222 (23%)
Query: 1 MGTREDE--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK 58
M EDE +YLFK+V+IGDS VGKSNLLSR+ RNEFN+ SK+TIGVEF T+ +++D K
Sbjct: 1 MSGSEDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSK 60
Query: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI++ T+++V RWL EL+ H D +
Sbjct: 61 EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVA 120
Query: 119 IMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
+MLVG NK D
Sbjct: 121 MMLVG---------------------------------------------------NKCD 129
Query: 179 LRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
L ++RAV DE K+ AE L F+ETSALDSTNV+TAF+ ++
Sbjct: 130 LENIRAVSVDEGKSLAEAEGLFFMETSALDSTNVKTAFEMVI 171
>gi|3024503|sp|Q40520.1|RB11C_TOBAC RecName: Full=Ras-related protein Rab11C
gi|623576|gb|AAA74112.1| putative [Nicotiana tabacum]
Length = 222
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 138/220 (62%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGK+ +L+RF RNEF+L+SK+TIGVEF TR++ + K++K
Sbjct: 6 GDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR HAD+NIVIML
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
G NK+DL
Sbjct: 126 TG---------------------------------------------------NKTDLED 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP ++AK FA++ L F+ETSA+++T +E AF +LT
Sbjct: 135 QRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLT 174
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 141/220 (64%), Gaps = 53/220 (24%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGK+ LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 6 GDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQE RA+TSAYYRGAVGA+LVYD+ K +++++ +WL ELR HAD+NIVIML
Sbjct: 66 AQIWDTAGQE--RAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIML 123
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK DL
Sbjct: 124 IG---------------------------------------------------NKCDLGS 132
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP ++A+ FA+R NL F+ETSAL++TNVETAF ILT
Sbjct: 133 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILT 172
>gi|168001170|ref|XP_001753288.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695574|gb|EDQ81917.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/212 (51%), Positives = 135/212 (63%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFKVVLIGDS VGKSNLLSR+ RNEFNL SK+TIGVEF T+S+++ K IKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIGGKEIKAQIWDTA 69
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI++ T+ENV RWL ELR H+D ++V+MLVG
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRGTFENVGRWLDELRVHSDASVVVMLVG----- 124
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R V +
Sbjct: 125 ----------------------------------------------NKCDLDNIREVSQE 138
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
EA A+ +SFIETSA+D+TNV AFQ+++
Sbjct: 139 EATLLAQNEKMSFIETSAMDATNVTNAFQSVV 170
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 131/208 (62%), Gaps = 51/208 (24%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQER 72
+VVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +KAQIWDTAG ER
Sbjct: 36 RVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 95
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYY 132
YRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+MLVG
Sbjct: 96 YRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG--------- 146
Query: 133 RGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKT 192
NKSDL R VP +EA
Sbjct: 147 ------------------------------------------NKSDLSQAREVPTEEACM 164
Query: 193 FAERNNLSFIETSALDSTNVETAFQNIL 220
FAE N L F+ETSALDSTNVE AFQ +L
Sbjct: 165 FAENNGLLFLETSALDSTNVELAFQTVL 192
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 131/207 (63%), Gaps = 51/207 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +KAQIWDTAG ERY
Sbjct: 33 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 92
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+MLVG
Sbjct: 93 RAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVG---------- 142
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
NKSDL R VP DEA+ F
Sbjct: 143 -----------------------------------------NKSDLSQAREVPTDEARMF 161
Query: 194 AERNNLSFIETSALDSTNVETAFQNIL 220
AE N L F+ETSALDSTNVE AF+ +L
Sbjct: 162 AENNGLLFLETSALDSTNVELAFETVL 188
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 134/212 (63%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+V+IGDS VGKSNLLSR+ RNEFN SK+TIGVEF T+ +++D K +KAQIWDTA
Sbjct: 8 EYLFKIVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEIDGKEVKAQIWDTA 67
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI++ LT++NV RWL EL+ HAD N+V MLVG
Sbjct: 68 GQERFRAVTSAYYRGAVGALIVYDISRRLTFDNVARWLEELKMHADSNVVKMLVG----- 122
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL H+R VP +
Sbjct: 123 ----------------------------------------------NKSDLEHIREVPVE 136
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ + AE L FIETSALD+TNV AFQ ++
Sbjct: 137 DGRKLAESEGLFFIETSALDNTNVMPAFQIVV 168
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 140/220 (63%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G ++ DY+FK+V+ GDSGVGKS LL+RF +NEF+++SK TIG+EF TR++ +D K +K
Sbjct: 6 GNADEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVMDHKLVK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERY+AIT+AYYRGA GALL YDI K T+++VE+WL ELR HAD+NI++ML
Sbjct: 66 AQIWDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 126 VG---------------------------------------------------NKSDLSS 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP + A+ FA++ L F+ETSALDS+NVE+AF +L+
Sbjct: 135 LRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLS 174
>gi|403345507|gb|EJY72124.1| hypothetical protein OXYTRI_06879 [Oxytricha trifallax]
Length = 266
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 139/216 (64%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D YD+LFK+VLIGDSGVGKSNLL R+T+N+F + S+STIGVEFATRSIQV+ + ++AQI
Sbjct: 8 QDHYDHLFKIVLIGDSGVGKSNLLLRYTKNQFKINSQSTIGVEFATRSIQVEDQFVRAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAIT+AYYR AVGALLVYDI K+ TY+N+ERW+ ELR+HA+ +I ++LVG
Sbjct: 68 WDTAGQERYRAITNAYYRNAVGALLVYDITKYNTYQNIERWITELREHAEYSISVLLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S L+ RA
Sbjct: 128 KSDLKSQ---------------------------------------------------RA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +EA +A+ NN+ FIETSALD+TNVE AF ++
Sbjct: 137 VSFEEANAYAKNNNIHFIETSALDATNVEIAFVKVI 172
>gi|162464222|ref|NP_001105299.1| small GTP binding protein1 [Zea mays]
gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays]
Length = 211
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/213 (52%), Positives = 134/213 (62%), Gaps = 52/213 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FK+V+IGD VGKS LLS F RNEF+L+SK TIGVEFATRSI+ + K +KAQIWDTA
Sbjct: 11 DYVFKIVVIGDDAVGKSQLLSGFARNEFSLDSKGTIGVEFATRSIRFEDKVVKAQIWDTA 70
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERY AITSAYYRGA GALLVYD+ +H T+E V RWL+ELRDH D NIVIMLVG + L
Sbjct: 71 GQERYLAITSAYYRGAAGALLVYDVTRHATFETVGRWLKELRDHTDSNIVIMLVGNKADL 130
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
R HLRAV +
Sbjct: 131 R---------------------------------------------------HLRAVSTE 139
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAE+ ++ F+ETSA D TNV+T+F+ +LT
Sbjct: 140 DAKAFAEKESIFFMETSAQD-TNVKTSFETLLT 171
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 133/216 (61%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E DYLFKVVLIGDS VGKSNLLSR+ RNEFN SK+TIGVEF T+S+++D K +KAQI
Sbjct: 6 EQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKEVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGAL+V+DI + T+ENV RWL EL+ H+D ++V+MLVG
Sbjct: 66 WDTAGQERFRAVTSAYYRGAVGALIVFDITRRGTFENVSRWLDELKVHSDSSVVVMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL H+R
Sbjct: 126 KS---------------------------------------------------DLAHIRE 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +EA AE N +SF+ETSAL+S NV AFQ +L
Sbjct: 135 VTVEEATALAENNAMSFMETSALESVNVAEAFQTVL 170
>gi|367013768|ref|XP_003681384.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
gi|359749044|emb|CCE92173.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
Length = 229
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 133/209 (63%), Gaps = 51/209 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIGDSGVGKSNLLSRFT N+FN+ESKSTIGVEFATR+I+V+ K IKAQIWDTAGQERY
Sbjct: 28 VVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERY 87
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G S L
Sbjct: 88 RAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDL----- 142
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
DH LRAVP DEA+ F
Sbjct: 143 ----------------------------DH------------------LRAVPTDEARNF 156
Query: 194 AERNNLSFIETSALDSTNVETAFQNILTA 222
A+ N L F ETSAL S NVE AF+ ++TA
Sbjct: 157 AQENQLLFTETSALKSENVELAFRELITA 185
>gi|168040993|ref|XP_001772977.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675710|gb|EDQ62202.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 133/216 (61%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E DYLFKVVLIGDS VGKSNLLSR+ RNEFN SK+TIGVEF T+S+++D K +KAQI
Sbjct: 6 EQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKELKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGAL+VYDI + T+ENV RW EL+ H+D N+V+MLVG
Sbjct: 66 WDTAGQERFRAVTSAYYRGAVGALIVYDITRRGTFENVSRWFDELKVHSDANVVVMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL H+R
Sbjct: 126 KS---------------------------------------------------DLAHIRE 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V A+EA AE+N + F+ETSAL++ NV AFQ +L
Sbjct: 135 VTAEEATALAEKNTMYFMETSALEAVNVVEAFQTVL 170
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 131/207 (63%), Gaps = 51/207 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + IKAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERY 60
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+MLVG
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG---------- 110
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
NKSDL R VP +EA+ F
Sbjct: 111 -----------------------------------------NKSDLSQSREVPTEEARMF 129
Query: 194 AERNNLSFIETSALDSTNVETAFQNIL 220
AE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 AENNGLLFLETSALDSTNVELAFETVL 156
>gi|351696645|gb|EHA99563.1| Ras-related protein Rab-25 [Heterocephalus glaber]
Length = 212
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 138/221 (62%), Gaps = 53/221 (23%)
Query: 1 MGTR-EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAG E YR T YYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 IKAQIWDTAGLELYRG-TRRYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 119
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NKSDL
Sbjct: 120 MLVG---------------------------------------------------NKSDL 128
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP DEA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 129 SQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVL 169
>gi|145529147|ref|XP_001450362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia]
gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia]
gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 133/218 (61%), Gaps = 51/218 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T ++EYD+LFK+VLIGDSGVGK+N+L RF N+F LESK TIGVEFAT+++Q K++K
Sbjct: 4 TNDEEYDFLFKIVLIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQQSGKSVKC 63
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAIT+AYYRGAVGA + YD+ + T++N E+WL EL++HAD NIVI+++
Sbjct: 64 QIWDTAGQERYRAITNAYYRGAVGAFICYDVTREPTFKNTEKWLAELKEHADGNIVIIMI 123
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NK+D
Sbjct: 124 G---------------------------------------------------NKTDAVDQ 132
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
RAV DEA F E+ + FIETSALD TN++ AF I+
Sbjct: 133 RAVRTDEASNFCEQQKIGFIETSALDGTNIDVAFNKIV 170
>gi|162464337|ref|NP_001105300.1| small GTP binding protein2 [Zea mays]
gi|1020093|dbj|BAA06702.1| mgp2 GTP-binding protein [Zea mays]
Length = 216
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/227 (52%), Positives = 138/227 (60%), Gaps = 63/227 (27%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M + EYDY+FKVV+IGDSGVGKS LL F RN NLESKSTIGVEFATRSI+ + K +
Sbjct: 1 MEVGQKEYDYVFKVVVIGDSGVGKSQLLMGFARNH-NLESKSTIGVEFATRSIRFEDKVV 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIM
Sbjct: 60 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 119
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG + LR
Sbjct: 120 LVGNKADLR--------------------------------------------------- 128
Query: 181 HLRAVPADEAKTFAE------RNNLSFIETSALDSTNVETAFQNILT 221
HLRAV ++AK FAE N+ + ETSAL + AF+N+LT
Sbjct: 129 HLRAVATEDAKAFAEMESTFFMGNIRYGETSAL-----KEAFKNVLT 170
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 137/213 (64%), Gaps = 52/213 (24%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQ-KTIKAQ 63
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESK+TIGVEFAT+S ++ +++K Q
Sbjct: 7 QEEYDFLFKIVLIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSLENGQSVKVQ 66
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAIT+ YYRGAVGALLVYDI K T+E+V+RWL+EL +A+ IVI+LVG
Sbjct: 67 IWDTAGQERYRAITNTYYRGAVGALLVYDITKMKTFESVDRWLQELHQYAESGIVILLVG 126
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
NK+DL LR
Sbjct: 127 ---------------------------------------------------NKTDLHKLR 135
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAF 216
V +EA FA NL+FIETSAL S+NV+ AF
Sbjct: 136 EVKREEAAEFASLKNLAFIETSALVSSNVDEAF 168
>gi|225456136|ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
gi|297734313|emb|CBI15560.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 136/217 (62%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DE DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 7 DDECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GALLVYDI + T+EN+++WLRELRD ++VI+LVG
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMVIVLVG- 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL H R
Sbjct: 126 --------------------------------------------------NKSDLGHSRE 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +E KT AE L F+ETSAL++ NVE AF +++T
Sbjct: 136 VDEEEGKTLAETEGLCFMETSALENLNVEEAFLHMIT 172
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 137/222 (61%), Gaps = 53/222 (23%)
Query: 1 MGTREDE--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK 58
M EDE +YLFK+V+IGDS VGKSNLLSR+ RNEFN+ SK+TIGVEF T+ +++D K
Sbjct: 1 MSGSEDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSK 60
Query: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI++ T+++V RWL EL+ H D +
Sbjct: 61 EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVA 120
Query: 119 IMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
+MLVG NK D
Sbjct: 121 MMLVG---------------------------------------------------NKCD 129
Query: 179 LRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
L ++RAV DE K+ AE L F+ETSALDSTNV+ AF+ ++
Sbjct: 130 LENIRAVSIDEGKSLAEAEGLFFMETSALDSTNVKMAFEMVI 171
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 133/212 (62%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFKVVLIGDS VGKSNLLSR+ RNEF++ SK+TIGVEF T+S++ D K IKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQIWDTA 67
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI++ T+E+V RWL EL+ H+D NIV MLVG
Sbjct: 68 GQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVG----- 122
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL LR VP +
Sbjct: 123 ----------------------------------------------NKCDLETLREVPIE 136
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E+K AE L FIETSAL++TNV AFQ ++
Sbjct: 137 ESKALAEAEKLFFIETSALNATNVNDAFQIVI 168
>gi|268567488|ref|XP_002647794.1| Hypothetical protein CBG23562 [Caenorhabditis briggsae]
Length = 153
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/200 (54%), Positives = 132/200 (66%), Gaps = 52/200 (26%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
R++EYDYLFKVVL+GDSGVGKSNLLSRFTRN F+LE+KSTIGVEFATRS+ ++ K IKA
Sbjct: 5 RDEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKAT 64
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQ-NIVIMLV 122
IWDTAGQERYRAIT AYYRGA+G L+VYDIAKH T++N+++WL+ELR+HAD+ NI IMLV
Sbjct: 65 IWDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLV 124
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G + LR HL
Sbjct: 125 GNKTDLR---------------------------------------------------HL 133
Query: 183 RAVPADEAKTFAERNNLSFI 202
RAVP EA +A+RN++SFI
Sbjct: 134 RAVPTQEAAIYADRNHMSFI 153
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 133/212 (62%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFKVVLIGDS VGKSNLLSR+ RNEF++ SK+TIGVEF T+S++ D K IKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQIWDTA 67
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI++ T+E+V RWL EL+ H+D NIV MLVG
Sbjct: 68 GQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVG----- 122
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL LR VP +
Sbjct: 123 ----------------------------------------------NKCDLETLREVPIE 136
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E+K AE L FIETSAL++TNV AFQ ++
Sbjct: 137 ESKALAEAEKLFFIETSALNATNVNDAFQIVI 168
>gi|488700|emb|CAA55865.1| Rab [Medicago sativa]
Length = 217
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 138/218 (63%), Gaps = 53/218 (24%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR++ VD K IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL-RELRDHADQNIVIMLVG 123
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV + R + H Q+ + LVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHGTFENVRQMAERTAKPHRFQHCCV-LVG 125
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
+ LR HL
Sbjct: 126 NKADLR---------------------------------------------------HLV 134
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
AV ++ K++AE+ +L F+ETSAL++TNVE +F +LT
Sbjct: 135 AVSTEDGKSYAEKESLYFMETSALEATNVENSFAEVLT 172
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 134/213 (62%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVV+IGDSGVGKS LL+RF RNEF+L+SK+TIGVEF T+++ +D K +KAQIWDTA
Sbjct: 14 DYMFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLMDHKLVKAQIWDTA 73
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERY+AIT+AYYRGA GALL YDI K T+ ++E+WL EL +HAD+NIV+MLVG
Sbjct: 74 GQERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADKNIVVMLVG----- 128
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL +R VP +
Sbjct: 129 ----------------------------------------------NKSDLSSIREVPIE 142
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
EA+ A++ FIETSALDS NVE AF +L+
Sbjct: 143 EAEDLAKQKGFFFIETSALDSNNVEPAFLGLLS 175
>gi|145485861|ref|XP_001428938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834601|emb|CAI44716.1| rab_A25 [Paramecium tetraurelia]
gi|124396027|emb|CAK61540.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 137/216 (63%), Gaps = 51/216 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M +D+YDYLFK+VL GDSGVGKSNLL RFT+N+FN +SK+TIGVEFATRSI + K +
Sbjct: 1 MSKADDDYDYLFKIVLSGDSGVGKSNLLLRFTKNQFNADSKTTIGVEFATRSITISGKVV 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAIT+A
Sbjct: 61 KAQIWDTAGQERYRAITAA----------------------------------------- 79
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
YYRGA+GA+LVYDI ++E VE+W++E+R++AD++IVIM++GNKSDL+
Sbjct: 80 ----------YYRGAIGAVLVYDITNKQSFEAVEQWIQEVRENADKDIVIMIIGNKSDLK 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAF 216
HLRA+ + + A+ ++F+E SA D TNV+ AF
Sbjct: 130 HLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAF 165
>gi|149048127|gb|EDM00703.1| RAB25, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 199
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/207 (52%), Positives = 130/207 (62%), Gaps = 51/207 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
+VLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +KAQIWDTAG ERY
Sbjct: 1 MVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+MLVG
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG---------- 110
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
NKSDL R VP +EA F
Sbjct: 111 -----------------------------------------NKSDLSQAREVPTEEACMF 129
Query: 194 AERNNLSFIETSALDSTNVETAFQNIL 220
AE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 AENNGLLFLETSALDSTNVELAFETVL 156
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 137/220 (62%), Gaps = 51/220 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M ED+YDYLFKVVL GDSGVGKSNLL RFT+N+FN +SK+TIGVEFATRSI + K I
Sbjct: 1 MSKAEDDYDYLFKVVLSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISISGKII 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGA+GA+LVYDI ++E+VERW++E+R++AD++IVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAIGAVLVYDITNKQSFESVERWIQEVRENADKDIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
++G S L +
Sbjct: 121 IIGNKSDL---------------------------------------------------K 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
HLRA+ + + A+ ++F+E SA D TNV+ AF I+
Sbjct: 130 HLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFTQII 169
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 132/218 (60%), Gaps = 51/218 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T +++YDYLFK+VLIGDSGVGK+N+L RF NEF LESK TIGVEFAT++ Q K++K
Sbjct: 4 TNDEDYDYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQQQGKSVKC 63
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQER+RAIT+AYYRGAVGA + YDI + +T++N E+WL EL++HAD NIVI+++
Sbjct: 64 QIWDTAGQERFRAITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEHADGNIVIIMI 123
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NK D
Sbjct: 124 G---------------------------------------------------NKIDAVDS 132
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
RAV DEA+ + E + FIETSALD TN++ AF I+
Sbjct: 133 RAVRTDEAQDYCESQKIGFIETSALDGTNIDVAFNKIV 170
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 109/207 (52%), Positives = 128/207 (61%), Gaps = 51/207 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TR++ + IKAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFKQDSRTTIGVEFSTRTVTLGTAAIKAQIWDTAGLERY 60
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLV+D+ KH TY ERWL+EL DHA+ IV+MLVG S
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVAERWLKELYDHAEATIVVMLVGNKS------- 113
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
DL+ R VP +EA+ F
Sbjct: 114 --------------------------------------------DLQQAREVPTEEARMF 129
Query: 194 AERNNLSFIETSALDSTNVETAFQNIL 220
AE N L F+ETSALDSTNVE AFQ +L
Sbjct: 130 AENNGLLFLETSALDSTNVELAFQTVL 156
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 131/212 (61%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFKVV+IGDS VGKSNLLSR+ RNEFNL SK+TIGVEF T+S+ +D K +KAQIWDTA
Sbjct: 13 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKEVKAQIWDTA 72
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGA GALLVYDI++ T++NV RWL+EL H+D + MLVG
Sbjct: 73 GQERFRAVTSAYYRGAFGALLVYDISRRGTFDNVGRWLQELNTHSDTTVAKMLVG----- 127
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R VP +
Sbjct: 128 ----------------------------------------------NKCDLDNIREVPVE 141
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDSTNV TAF+ ++
Sbjct: 142 EGKALAESEGLFFMETSALDSTNVNTAFELVI 173
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 138/218 (63%), Gaps = 51/218 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
RE+E DYLFK+V+IGDS VGKSNLL+RFTRNEF ++K+TIGV+F T+SI+++ K I AQ
Sbjct: 2 REEENDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEGKVITAQ 61
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
WDTAGQER+RA+TS YYRGA+GA++VYDI ++++NV RWL ELR+ A+ +I++M+VG
Sbjct: 62 CWDTAGQERFRAVTSGYYRGALGAMIVYDITSKISFKNVTRWLNELREMAEPDILVMMVG 121
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
NKSDL R
Sbjct: 122 ---------------------------------------------------NKSDLESSR 130
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V EA++FAE N +SF+ETSAL+STNV +F+ +LT
Sbjct: 131 EVSTREAQSFAEANKISFLETSALNSTNVNLSFEKLLT 168
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 130/207 (62%), Gaps = 51/207 (24%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
RAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+MLVG S
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKS------- 113
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
DL+ R VP +EA+ F
Sbjct: 114 --------------------------------------------DLQQAREVPTEEARMF 129
Query: 194 AERNNLSFIETSALDSTNVETAFQNIL 220
AE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 AENNGLLFLETSALDSTNVELAFETVL 156
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 135/210 (64%), Gaps = 51/210 (24%)
Query: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQ 70
LFK+VLIGDSGVGK+NL SRFT +EFNLESKSTIGV+FAT+++++D K +KAQIWDTAGQ
Sbjct: 11 LFKIVLIGDSGVGKTNLRSRFTNDEFNLESKSTIGVDFATKNVKIDGKVVKAQIWDTAGQ 70
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRR 130
ERYRAITSAYYRGAVGA+LVYDI+K T+ N+ +WL EL+++A +++IML+G
Sbjct: 71 ERYRAITSAYYRGAVGAILVYDISKPHTFLNLNKWLEELKEYASDDVIIMLIG------- 123
Query: 131 YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEA 190
NK DL+HLR V ++A
Sbjct: 124 --------------------------------------------NKCDLKHLRCVLTEDA 139
Query: 191 KTFAERNNLSFIETSALDSTNVETAFQNIL 220
+A++ +SF+ETSALDS NVE AF +
Sbjct: 140 TRYAKQQGISFMETSALDSINVEEAFNQTI 169
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 132/211 (62%), Gaps = 51/211 (24%)
Query: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
YLFKVV+IGDS VGKSNLLSR+ RNEFNL SK+TIGVEF T+S+++D K +KAQIWDT G
Sbjct: 14 YLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTTG 73
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLR 129
QER+RA+TSAYYRGAVGAL+VYDI++ T+++V RWL EL+ H D + +MLVG
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVG------ 127
Query: 130 RYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADE 189
NK DL ++R V +E
Sbjct: 128 ---------------------------------------------NKCDLDNIRDVSIEE 142
Query: 190 AKTFAERNNLSFIETSALDSTNVETAFQNIL 220
K+ AE L F+ETSALDSTNV+TAF+ ++
Sbjct: 143 GKSLAESEGLFFMETSALDSTNVKTAFEMVI 173
>gi|363746901|ref|XP_003643843.1| PREDICTED: ras-related protein Rab-25-like, partial [Gallus gallus]
Length = 156
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/206 (53%), Positives = 129/206 (62%), Gaps = 51/206 (24%)
Query: 15 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYR 74
VLIG+SGVGK+NLLSRFTRNEFN +S++TIGVEF+TR++ V +KAQIWDTAG ERYR
Sbjct: 1 VLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVLVGDAAVKAQIWDTAGLERYR 60
Query: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRG 134
AITSAYYRGAVGAL+V+DI KH TY+ VERWL+EL DHA+ +IV+MLVG S
Sbjct: 61 AITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEASIVVMLVGNKS-------- 112
Query: 135 AVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFA 194
DL R VP +EAK FA
Sbjct: 113 -------------------------------------------DLAQEREVPTEEAKMFA 129
Query: 195 ERNNLSFIETSALDSTNVETAFQNIL 220
E L FIETSALDSTNVE AF+ +L
Sbjct: 130 ENKGLLFIETSALDSTNVEEAFETVL 155
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 131/212 (61%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFKVV+IGDS VGKSNLLSR+ RNEFNL SK+TIGVEF T+S+ +D K +KAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKDVKAQIWDTA 70
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGA GALLVYDI++ T++NV RWL+EL H+D + MLVG
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVG----- 125
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R VP +
Sbjct: 126 ----------------------------------------------NKCDLDNIREVPVE 139
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDSTNV TAF+ ++
Sbjct: 140 EGKALAEAEGLFFMETSALDSTNVRTAFEIVI 171
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+V+IGDS VGKSNLLSR+ RNEFNL SK+TIGVEF T+S+++D K +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI++ T+++V RWL EL+ H+D + +MLVG
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVG----- 124
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R V +
Sbjct: 125 ----------------------------------------------NKCDLENIRDVSVE 138
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
EAK AE L F+ETSALDSTNV+ AF+ ++
Sbjct: 139 EAKCLAEAEGLFFMETSALDSTNVKKAFEIVI 170
>gi|328872576|gb|EGG20943.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 238
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 131/219 (59%), Gaps = 70/219 (31%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T ++EYDYLF TRNEFNLE+KSTIGVEFATRSI+ + K IKA
Sbjct: 5 TGQEEYDYLF-------------------TRNEFNLETKSTIGVEFATRSIETEGKIIKA 45
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGALLVYDIAK TY++VERWL ELR++AD+NI IMLV
Sbjct: 46 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIEIMLV 105
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G + LR HL
Sbjct: 106 GNKNDLR---------------------------------------------------HL 114
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
R V DEAK FAE++ LSFIETSALDS+NVE AFQ ILT
Sbjct: 115 REVSTDEAKDFAEKHKLSFIETSALDSSNVEIAFQTILT 153
>gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|22093831|dbj|BAC07118.1| putative Rab GTP-binding protein Rab11a [Oryza sativa Japonica
Group]
gi|113611915|dbj|BAF22293.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|215734858|dbj|BAG95580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200085|gb|EEC82512.1| hypothetical protein OsI_26999 [Oryza sativa Indica Group]
Length = 220
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 130/219 (59%), Gaps = 51/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G E DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + +D K IK
Sbjct: 5 GDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T+++V RWL EL H+D N+V +L
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTIL 124
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NK+DL+H
Sbjct: 125 VG---------------------------------------------------NKTDLKH 133
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V E K AE L F+ETSALDS+NV AFQ ++
Sbjct: 134 AREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVV 172
>gi|302776382|ref|XP_002971361.1| rab family GTPase [Selaginella moellendorffii]
gi|300161343|gb|EFJ27959.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 134/215 (62%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D DYLFK+VLIGDS VGKSNLLSR++RNEF+L S++TIGVEF T+S+ ++ K +KAQIW
Sbjct: 7 DGDDYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQIW 66
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQER+RA+TSAYYRGAVGA++VYDI++ T+ENVERWL ELR ++D ++V MLVG
Sbjct: 67 DTAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGNK 126
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S DL LR V
Sbjct: 127 S---------------------------------------------------DLESLRQV 135
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+EA AER L FIETSALDSTNV AF+ ++
Sbjct: 136 SIEEATDLAEREGLFFIETSALDSTNVAAAFETVI 170
>gi|302756057|ref|XP_002961452.1| rab family GTPase [Selaginella moellendorffii]
gi|300170111|gb|EFJ36712.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 134/215 (62%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D DYLFK+VLIGDS VGKSNLLSR++RNEF+L S++TIGVEF T+S+ ++ K +KAQIW
Sbjct: 7 DGDDYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQIW 66
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQER+RA+TSAYYRGAVGA++VYDI++ T+ENVERWL ELR ++D ++V MLVG
Sbjct: 67 DTAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGNK 126
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S DL LR V
Sbjct: 127 S---------------------------------------------------DLESLRQV 135
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+EA AER L FIETSALDSTNV AF+ ++
Sbjct: 136 SIEEATDLAEREGLFFIETSALDSTNVAAAFETVI 170
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 131/212 (61%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFKVV+IGDS VGKSNLLSR+ RNEFN SK+TIGVEF T+++++D K +KAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQTMEIDSKEVKAQIWDTA 70
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGA GALLVYD+++ T++NV RWL+EL H+D + MLVG
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDVSRRSTFDNVGRWLQELNTHSDTTVAKMLVG----- 125
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R VP +
Sbjct: 126 ----------------------------------------------NKCDLENIREVPVE 139
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDSTNV TAF+ ++
Sbjct: 140 EGKALAESEGLFFMETSALDSTNVNTAFELVI 171
>gi|357121819|ref|XP_003562615.1| PREDICTED: ras-related protein RABA5a-like [Brachypodium
distachyon]
Length = 223
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 130/219 (59%), Gaps = 51/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G E DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + +D K IK
Sbjct: 5 GDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDI + T+++V RWL EL H+D N+V +L
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHTHSDMNVVTIL 124
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK+DL+H
Sbjct: 125 IG---------------------------------------------------NKTDLKH 133
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V E K AE L F+ETSALDS+NV+ AFQ ++
Sbjct: 134 AREVSTAEGKALAEAQGLFFMETSALDSSNVKAAFQTVV 172
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 131/212 (61%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFKVV+IGDS VGKSNLLSR+ RNEFNL SK+TIGVEF T+S+ ++ K +KAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTA 70
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGA GALLVYDI++ T++NV RWL+EL H+D + MLVG
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVG----- 125
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R VP +
Sbjct: 126 ----------------------------------------------NKCDLDNIREVPVE 139
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDSTNV TAF+ ++
Sbjct: 140 EGKALAEAEGLFFMETSALDSTNVRTAFEIVI 171
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 138/222 (62%), Gaps = 53/222 (23%)
Query: 1 MGTREDEY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK 58
MG +E+E DY+FKVVLIGDS VGKSNLL+R+ RNEFN SK+TIGVEF T+S++++ K
Sbjct: 1 MGYQEEEAGEDYIFKVVLIGDSAVGKSNLLTRYARNEFNQNSKATIGVEFQTQSMRINGK 60
Query: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
+KAQ+WDTAGQER+RA+TSAYYRGA+GAL+VYDI + T+EN+ +WL ELR + ++V
Sbjct: 61 EVKAQVWDTAGQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVV 120
Query: 119 IMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
MLVG NK D
Sbjct: 121 TMLVG---------------------------------------------------NKCD 129
Query: 179 LRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
L ++R V +E K AE NL F+ETSAL STNV+TAFQN++
Sbjct: 130 LTNIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVV 171
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 134/212 (63%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+V+IGDS VGKSNLLSR+ RNEFNL SK+TIGVEF T+S+++D K +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI++ T+++V RWL EL+ H+D + +MLVG
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVG----- 124
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R V +
Sbjct: 125 ----------------------------------------------NKCDLENIRDVSVE 138
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K+ AE L F+ETSALDSTNV+ AF+ ++
Sbjct: 139 EGKSLAEAEGLFFMETSALDSTNVKKAFEIVI 170
>gi|125601208|gb|EAZ40784.1| hypothetical protein OsJ_25262 [Oryza sativa Japonica Group]
Length = 246
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 130/219 (59%), Gaps = 51/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G E DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + +D K IK
Sbjct: 5 GDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++ T+++V RWL EL H+D N+V +L
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTIL 124
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NK+DL+H
Sbjct: 125 VG---------------------------------------------------NKTDLKH 133
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V E K AE L F+ETSALDS+NV AFQ ++
Sbjct: 134 AREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVV 172
>gi|224135525|ref|XP_002322095.1| predicted protein [Populus trichocarpa]
gi|222869091|gb|EEF06222.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 134/217 (61%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++E DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 6 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GALLVYDI + T++NV++WL ELRD ++V++LVG
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVVVLVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSD+ HLR
Sbjct: 125 --------------------------------------------------NKSDISHLRE 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+ K AE L F+ETSAL++ NVE AF ++T
Sbjct: 135 VDEDDGKNLAETEALYFMETSALENLNVEEAFMQMIT 171
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 131/212 (61%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFKVV+IGDS VGKSNLLSR+ RNEFNL SK+TIGVEF T+S+ ++ K +KAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTA 70
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGA GALLVYDI++ T++NV RWL+EL H+D + MLVG
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVG----- 125
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R VP +
Sbjct: 126 ----------------------------------------------NKCDLDNIREVPVE 139
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDSTNV TAF+ ++
Sbjct: 140 EGKALAEAEGLFFMETSALDSTNVRTAFEIVI 171
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 136/220 (61%), Gaps = 52/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G ++ DY+FKVV++GDSGVGKS LL+RF RNEF ++SK+TIGVEF T+++ +D K +K
Sbjct: 6 GDSDEGIDYMFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMDHKVVK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERY+AIT+AYYRGA GALL YDI ++++VE+WL ELR HAD NI++ML
Sbjct: 66 AQIWDTAGQERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHAD-NIIVML 124
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG S DL
Sbjct: 125 VGNKS---------------------------------------------------DLSS 133
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAVP +EAK FA++ L F+ETSALDS NVE+AF +L+
Sbjct: 134 GRAVPMEEAKDFAKQKGLFFVETSALDSNNVESAFLGLLS 173
>gi|296088976|emb|CBI38679.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 133/215 (61%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
++ DY+FKVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF TR++ + K IKAQIW
Sbjct: 24 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIW 83
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRA+TSAYYRGA+GA+LVYDI K T+++V RW+ ELR HAD +IVIMLVG
Sbjct: 84 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVG-- 141
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK+DL RAV
Sbjct: 142 -------------------------------------------------NKADLVDQRAV 152
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
P+++A F+E L F ETSAL+ NVETAF +L
Sbjct: 153 PSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVL 187
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 134/211 (63%), Gaps = 51/211 (24%)
Query: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQ 70
+FK+V++GDSGVGKS LL+RF +NEF+++SK TIGVEF TR++ +D K +KAQIWDTAGQ
Sbjct: 1 MFKIVMVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 60
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRR 130
ERY+AIT+AYYRGA ALL YDI K T+++VE+WL ELR H D+NI++MLVG
Sbjct: 61 ERYQAITTAYYRGATCALLAYDITKQQTFDHVEKWLDELRIHTDKNILVMLVG------- 113
Query: 131 YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEA 190
NKSDL LRAVP + A
Sbjct: 114 --------------------------------------------NKSDLSSLRAVPTEVA 129
Query: 191 KTFAERNNLSFIETSALDSTNVETAFQNILT 221
+ FA++ L F+ETSALDS+NVE+AF +L+
Sbjct: 130 RDFAQQEGLFFLETSALDSSNVESAFIGLLS 160
>gi|359489460|ref|XP_002262618.2| PREDICTED: ras-related protein RABA3-like [Vitis vinifera]
Length = 235
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 133/215 (61%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
++ DY+FKVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF TR++ + K IKAQIW
Sbjct: 20 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIW 79
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRA+TSAYYRGA+GA+LVYDI K T+++V RW+ ELR HAD +IVIMLVG
Sbjct: 80 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVG-- 137
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK+DL RAV
Sbjct: 138 -------------------------------------------------NKADLVDQRAV 148
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
P+++A F+E L F ETSAL+ NVETAF +L
Sbjct: 149 PSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVL 183
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 138/218 (63%), Gaps = 51/218 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
+E++ DYLFK+V+IGDS VGKSNLL+RFTRNEF ++K+TIGV+F T+SI+++ K I AQ
Sbjct: 3 QEEDNDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIENKVITAQ 62
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
WDTAGQER+RA+TS YYRGAVGA++VYDI ++++NV RWL ELR+ AD +I+IM+VG
Sbjct: 63 CWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKVSFKNVTRWLNELREMADPDILIMMVG 122
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
NKSDL R
Sbjct: 123 ---------------------------------------------------NKSDLDSAR 131
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V EA++FA+ + +SF+ETSAL+S+NV AF+ +LT
Sbjct: 132 EVSTQEAQSFAQSHKISFLETSALNSSNVNLAFERLLT 169
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 131/216 (60%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E DYLFK+VLIGDS VGKSNLL+R+ RNEF SKSTIGVEF T+++Q+D K IKAQI
Sbjct: 8 EQTEDYLFKIVLIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQIDGKEIKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGAL+VYDI++ T++N+ RWL EL H+D N+V ++VG
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALVVYDISRRQTFDNISRWLDELHTHSDMNVVTVIVG- 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL R
Sbjct: 127 --------------------------------------------------NKTDLLDARE 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +E AE N+ F+ETSALDSTNV+ AFQ ++
Sbjct: 137 VSTEEGAALAEAQNIYFVETSALDSTNVQLAFQTVV 172
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/212 (49%), Positives = 131/212 (61%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFKVV+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ +D K +KAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFSLHSKATIGVEFQTQSMDIDGKEVKAQIWDTA 70
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGA GALLVYDI++ T++NV RWL+EL H+D + MLVG
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVG----- 125
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R VP +
Sbjct: 126 ----------------------------------------------NKCDLDNIREVPVE 139
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALD+TNV TAF+ ++
Sbjct: 140 EGKALAEAEGLFFMETSALDATNVRTAFEIVI 171
>gi|212723946|ref|NP_001131951.1| uncharacterized protein LOC100193344 [Zea mays]
gi|194693006|gb|ACF80587.1| unknown [Zea mays]
gi|195620812|gb|ACG32236.1| ras-related protein ARA-4 [Zea mays]
gi|414887766|tpg|DAA63780.1| TPA: Ras protein ARA-4 isoform 1 [Zea mays]
gi|414887767|tpg|DAA63781.1| TPA: Ras protein ARA-4 isoform 2 [Zea mays]
Length = 222
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 129/212 (60%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFK+VLIGDS VGKSNLL+RF RNEF SKSTIGVEF T+ + +D K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGALLVYDI++ T+++V RWL EL +H+D N+V +LVG
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHNHSDMNVVTILVG----- 126
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK+DL+H R V
Sbjct: 127 ----------------------------------------------NKTDLKHAREVSTA 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E + AE L F+ETSALDS+NV AFQ ++
Sbjct: 141 EGQALAEAQGLFFMETSALDSSNVAAAFQTVV 172
>gi|326503068|dbj|BAJ99159.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506770|dbj|BAJ91426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 223
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 129/219 (58%), Gaps = 51/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + +D K IK
Sbjct: 5 GDEQQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGKEIK 64
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQER+RA+TSAYYRGAVGALLVYDI + T+++V RWL EL H+D N+V +L
Sbjct: 65 AQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHAHSDMNVVTIL 124
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK+DL+H
Sbjct: 125 IG---------------------------------------------------NKTDLKH 133
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V E K AE L F+ETSALDS+NV AFQ ++
Sbjct: 134 AREVSPAEGKALAEAQGLFFMETSALDSSNVTAAFQTVV 172
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 130/212 (61%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+V+IGDS VGKSNLL+R+ RNEFN SK+TIGVEF T+S+ +D K +KAQIWDTA
Sbjct: 9 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMVIDGKEVKAQIWDTA 68
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI + T+ENV RWL EL H+D + ML+G
Sbjct: 69 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIG----- 123
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL +RAV +
Sbjct: 124 ----------------------------------------------NKCDLESIRAVSVE 137
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K+ AE L F+ETSALDSTNV+TAF+ ++
Sbjct: 138 EGKSLAESEGLFFMETSALDSTNVKTAFEMVI 169
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 133/216 (61%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E +YLFK+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+S++++ K +KAQI
Sbjct: 49 EGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQI 108
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGAL+VYDI + T+E+V RWL EL+ H+D + MLVG
Sbjct: 109 WDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVG- 167
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL ++RA
Sbjct: 168 --------------------------------------------------NKCDLENIRA 177
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +E K AE L F+ETSALDSTNV+TAF+ ++
Sbjct: 178 VSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVI 213
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c; AltName:
Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 130/212 (61%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+V+IGDS VGKSNLL+R+ RNEFN SK+TIGVEF T+S+ +D K +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTA 69
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI + T+ENV RWL EL H+D + ML+G
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIG----- 124
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL +RAV +
Sbjct: 125 ----------------------------------------------NKCDLESIRAVSVE 138
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K+ AE L F+ETSALDSTNV+TAF+ ++
Sbjct: 139 EGKSLAESEGLFFMETSALDSTNVKTAFEMVI 170
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 137/222 (61%), Gaps = 53/222 (23%)
Query: 1 MGTREDEY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK 58
MG +E+E DY+FKVVLIGDS VGKSNLL+R+ RNEFN SK+TIGVEF T+S++++ K
Sbjct: 1 MGYQEEEAGEDYIFKVVLIGDSAVGKSNLLTRYARNEFNHNSKATIGVEFQTQSMRINGK 60
Query: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
+KAQ+WDTAGQER+RA+TSAYYRGA+GAL+VYDI + T+EN+ +WL ELR + ++V
Sbjct: 61 EVKAQVWDTAGQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVV 120
Query: 119 IMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
MLVG NK D
Sbjct: 121 TMLVG---------------------------------------------------NKCD 129
Query: 179 LRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
L +R V +E K AE NL F+ETSAL STNV+TAFQN++
Sbjct: 130 LTDIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVV 171
>gi|145504587|ref|XP_001438260.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831454|emb|CAI39309.1| rab_C29 [Paramecium tetraurelia]
gi|124405432|emb|CAK70863.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 135/216 (62%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+ E +LFK+VLIGDS VGKSN+LSRFT+ +FN +S+ TIGVEFATRS+ + K I+AQI
Sbjct: 6 QQEEKHLFKIVLIGDSSVGKSNILSRFTKRQFNFDSQPTIGVEFATRSLTENGKIIQAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDT GQERY++ITSAYYRGAVGA+L+YDI K T+EN+E+W++EL+++A+ N+V ML+G
Sbjct: 66 WDTCGQERYKSITSAYYRGAVGAMLIYDITKQKTFENIEKWIQELKEYAETNVVAMLIG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL+ R
Sbjct: 125 --------------------------------------------------NKADLKAQRK 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP+D+A FAE + ++F+E SA D TNV+ AF ++
Sbjct: 135 VPSDKAAQFAENHTMAFMEVSAFDGTNVDLAFSRLI 170
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 132/212 (62%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+V+IGDS VGKSNLLSR+ RNEFN SK+TIGVEF T++++++ K +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI++ T+E+V RWL EL+ H+D + MLVG
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVG----- 124
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL +RAV +
Sbjct: 125 ----------------------------------------------NKCDLESIRAVSVE 138
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDSTNV+TAF+ ++
Sbjct: 139 EGKALAETEGLFFMETSALDSTNVKTAFEMVI 170
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 136/216 (62%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+ +YLFKVV+IGDS VGKSNLLSR+ RNEFN+ SK+TIGVEF T+S+++D K +KAQI
Sbjct: 91 EEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQI 150
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGAL+VYDI++ T+++V RWL EL+ H++ + MLVG
Sbjct: 151 WDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVG- 209
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL ++R
Sbjct: 210 --------------------------------------------------NKSDLENIRD 219
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +E K+ AE L FIETSALDSTNV+ AF+ ++
Sbjct: 220 VSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVI 255
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 132/216 (61%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E +YLFK+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+S+ ++ K +KAQI
Sbjct: 6 EGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMAIEGKEVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGAL+VYDI + T+E+V RWL EL+ H+D + MLVG
Sbjct: 66 WDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL ++RA
Sbjct: 125 --------------------------------------------------NKCDLENIRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V DE K AE L F+ETSALDSTNV+TAF+ ++
Sbjct: 135 VSVDEGKALAEAEGLFFVETSALDSTNVKTAFEMVI 170
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 132/212 (62%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+V+IGDS VGKSNLLSR+ RNEFN SK+TIGVEF T++++++ K +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI++ T+E+V RWL EL+ H+D + MLVG
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVG----- 124
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL +RAV +
Sbjct: 125 ----------------------------------------------NKCDLESIRAVSVE 138
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDSTNV+TAF+ ++
Sbjct: 139 EGKALAETEGLFFMETSALDSTNVKTAFEMVI 170
>gi|224127991|ref|XP_002320214.1| predicted protein [Populus trichocarpa]
gi|222860987|gb|EEE98529.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 132/216 (61%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ DY+FKVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF TR++ + K IKAQI
Sbjct: 2 QEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVIIKDKVIKAQI 61
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRA+TSAYYRGA+GA+LVYDI K T+++V RW+ ELR HAD +IVIML+G
Sbjct: 62 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRPTFDHVARWVEELRAHADNSIVIMLIG- 120
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL LRA
Sbjct: 121 --------------------------------------------------NKADLVDLRA 130
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP ++A FAE L F ETSAL NV+ AF +L
Sbjct: 131 VPTEDAVEFAEEQGLFFSETSALSGDNVDGAFFRLL 166
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 133/216 (61%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED YD+LFK+VLIGDSGVGKS L+SRFT+++F++E + TIGVEF+T++I++ K IKAQI
Sbjct: 7 EDVYDFLFKIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA GAL+V+DI K ++EN+ +W +EL++H+D IV ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIG- 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL R
Sbjct: 126 --------------------------------------------------NKCDLADQRN 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ D A FA+ +++++ETSAL STNVE AF I+
Sbjct: 136 ISKDAASKFAQEYDMAYLETSALHSTNVEQAFHQII 171
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e; AltName:
Full=Ras-related protein Ara-1; Flags: Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 133/216 (61%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E +YLFK+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+S++++ K +KAQI
Sbjct: 6 EGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGAL+VYDI + T+E+V RWL EL+ H+D + MLVG
Sbjct: 66 WDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL ++RA
Sbjct: 125 --------------------------------------------------NKCDLENIRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +E K AE L F+ETSALDSTNV+TAF+ ++
Sbjct: 135 VSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVI 170
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 133/212 (62%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+V+IGDS VGKSNLLSR+ RNEFNL SK+TIGVEF T+S+++D K +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI++ T+++V RWL EL+ H+D + MLVG
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARMLVG----- 124
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R V +
Sbjct: 125 ----------------------------------------------NKCDLENIRDVTVE 138
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K+ AE L F+ETSALDSTNV+ AF+ ++
Sbjct: 139 EGKSLAEAEGLFFMETSALDSTNVKKAFEIVI 170
>gi|403370433|gb|EJY85078.1| Rab-type small GTPase [Oxytricha trifallax]
Length = 254
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/223 (48%), Positives = 142/223 (63%), Gaps = 54/223 (24%)
Query: 1 MGTREDE--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQ 57
M T DE YDYLFKVV+IGDSGVGKSNLL R+T+ +FN+ESK+TIGVEFAT+SI+ D+
Sbjct: 1 MATTRDEEVYDYLFKVVMIGDSGVGKSNLLMRYTKGDFNIESKTTIGVEFATKSIKTQDK 60
Query: 58 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNI 117
K +KAQIWDTAGQERYRAIT+AYYRGAVGALLVYD+ ++++V WL+EL+ +AD NI
Sbjct: 61 KVVKAQIWDTAGQERYRAITNAYYRGAVGALLVYDVTCMDSFQHVSNWLKELKQYADSNI 120
Query: 118 VIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKS 177
VI+LVG + +L+D
Sbjct: 121 VILLVGNKT--------------------------------DLKDK-------------- 134
Query: 178 DLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V +EA +A++++L+FIETSALD +NV+ AF I+
Sbjct: 135 -----REVRKEEAAAYADQHSLAFIETSALDCSNVDLAFDRII 172
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 133/212 (62%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+V+IGDS VGKSNLLSR+ RNEFN SK+TIGVEF T+S++++ K +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEIEGKDVKAQIWDTA 69
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI++ T+E+V RWL EL+ H+D + MLVG
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVARWLDELKTHSDTTVARMLVG----- 124
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++RAV +
Sbjct: 125 ----------------------------------------------NKCDLDNMRAVSVE 138
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSAL+STNV+TAF+ ++
Sbjct: 139 EGKALAETQGLFFMETSALNSTNVKTAFEMVI 170
>gi|242046428|ref|XP_002461085.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
gi|241924462|gb|EER97606.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
Length = 222
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 105/212 (49%), Positives = 128/212 (60%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + +D K IKAQIWDTA
Sbjct: 12 DYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGALLVYDI++ T+++V RWL EL H+D N+V +LVG
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVG----- 126
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK+DL+H R V
Sbjct: 127 ----------------------------------------------NKTDLKHAREVSTA 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E + AE L F+ETSALDS+NV AFQ ++
Sbjct: 141 EGQALAEAQGLFFMETSALDSSNVAAAFQTVV 172
>gi|221505687|gb|EEE31332.1| Rab 11 protein, putative [Toxoplasma gondii VEG]
Length = 193
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 110/195 (56%), Positives = 125/195 (64%), Gaps = 52/195 (26%)
Query: 27 LLSRFTRNEFNLESKSTIGVEFATRSIQVDQ-KTIKAQIWDTAGQERYRAITSAYYRGAV 85
+LSRFTR+EFNLESKSTIGVEFAT+S+ +D+ K IKAQIWDTAGQERYRAITSAYYRGAV
Sbjct: 1 MLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAV 60
Query: 86 GALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIA 145
GALLVYDI K ++ENVERWL+ELRDHAD NIVI+LVG S L+
Sbjct: 61 GALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSDLK---------------- 104
Query: 146 KHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETS 205
HLRAV +EA FA R +L+FIETS
Sbjct: 105 -----------------------------------HLRAVSVEEATKFANREHLAFIETS 129
Query: 206 ALDSTNVETAFQNIL 220
ALD+TNVE AF IL
Sbjct: 130 ALDATNVEQAFHQIL 144
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 138/218 (63%), Gaps = 52/218 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKTIKAQ 63
++ YDYLFK+VLIGD+GVGKSNLL R+T+N+F + S+STIGVEFATR++++ D +KAQ
Sbjct: 9 QENYDYLFKIVLIGDAGVGKSNLLLRYTKNQFKINSQSTIGVEFATRNLKMGDDCYVKAQ 68
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAIT+AYYR AVGAL+VYDI+K ++EN+++W++ELRDHAD NI I L+G
Sbjct: 69 IWDTAGQERYRAITNAYYRNAVGALMVYDISKPNSFENIQKWMQELRDHADSNIAITLIG 128
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S L +HLR
Sbjct: 129 NKSDL---------------------------------------------------KHLR 137
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
AV ++A+ A+ + FIETSAL+S NV+ AF N++
Sbjct: 138 AVKFEDAQKLAQTYQIPFIETSALNSMNVDAAFMNLIN 175
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 133/216 (61%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E +YLFK+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+S++++ K +KAQI
Sbjct: 6 EGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGAL+VYDI + T+E+V RWL +L+ H+D + MLVG
Sbjct: 66 WDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDQLKIHSDTTVARMLVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL ++RA
Sbjct: 125 --------------------------------------------------NKCDLENIRA 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +E K AE L F+ETSALDSTNV+TAF+ ++
Sbjct: 135 VSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVI 170
>gi|156406695|ref|XP_001641180.1| predicted protein [Nematostella vectensis]
gi|156228318|gb|EDO49117.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 133/216 (61%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED YDYLFK+VLIGDSGVGKSNLLSR+T+NEF+L SK+TIGVE A R+++++ KT++AQI
Sbjct: 12 EDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQI 71
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGA+GA+LVYDIAK ++ N+ +W+ ELR HA ++ I+L+G
Sbjct: 72 WDTAGQERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGN 131
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S L +HLR
Sbjct: 132 KSDL---------------------------------------------------KHLRM 140
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ K FA + + F+ETSALDSTNV AF+ I
Sbjct: 141 IENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIF 176
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 128/212 (60%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFKVV+IGDS VGKSNLLSR+ RNEFN SK+TIGVEF T+S+ ++ K +KAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAIEGKEVKAQIWDTA 70
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGA GALLVYDI + T++NV RWL+EL H+D + MLVG
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDITRRSTFDNVGRWLQELNTHSDTTVAKMLVG----- 125
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL +R VP +
Sbjct: 126 ----------------------------------------------NKCDLGDIRQVPVE 139
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALD+TNV TAF+ ++
Sbjct: 140 EGKALAEAEGLFFMETSALDATNVRTAFEIVI 171
>gi|323309207|gb|EGA62432.1| Ypt32p [Saccharomyces cerevisiae FostersO]
Length = 153
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 119/187 (63%), Gaps = 51/187 (27%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G S
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
DL HLRAVP
Sbjct: 129 ---------------------------------------------------DLAHLRAVP 137
Query: 187 ADEAKTF 193
DEAK F
Sbjct: 138 TDEAKKF 144
>gi|194744897|ref|XP_001954929.1| GF16497 [Drosophila ananassae]
gi|190627966|gb|EDV43490.1| GF16497 [Drosophila ananassae]
Length = 166
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 118/221 (53%), Gaps = 99/221 (44%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG REDEYDYLFK
Sbjct: 1 MGAREDEYDYLFK----------------------------------------------- 13
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
AQIWDTAGQERYRAITSA
Sbjct: 14 -AQIWDTAGQERYRAITSA----------------------------------------- 31
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR
Sbjct: 32 ----------YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 81
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR+VP DEAK FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 82 HLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILT 122
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 131/215 (60%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+EYD+L+K+VL+G+SGVGKSNLL RFTRNEF+ + +STIGVEFATRSI K I+AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAIT+AYYRGA+GAL+VYDI K ++E+VE+WL EL ++AD+ +V M++G
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIG-- 122
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL R V
Sbjct: 123 -------------------------------------------------NKCDLSQTREV 133
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E + A++NN F ETSALD +NVE AF +L
Sbjct: 134 QTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLL 168
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 131/215 (60%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+EYD+L+K+VL+G+SGVGKSNLL RFTRNEF+ + +STIGVEFATRSI K I+AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAIT+AYYRGA+GAL+VYDI K ++E+VE+WL EL ++AD+ +V M++G
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIG-- 122
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL R V
Sbjct: 123 -------------------------------------------------NKCDLNQTREV 133
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E + A++NN F ETSALD +NVE AF +L
Sbjct: 134 QTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLL 168
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 134/214 (62%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFK+VL+GDSGVGKSNLL RF +NEF+ ++TIGVEF+T+S+Q++ + +KAQIWDT
Sbjct: 10 YDYLFKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQIEGQLVKAQIWDT 69
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYRA+T AYYR AVGALL+YDI ++EN+++W EL +H++ N V++LVG
Sbjct: 70 AGQERYRALTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTVMILVG---- 125
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
NK DL RA+
Sbjct: 126 -----------------------------------------------NKCDLSDQRAIKI 138
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+EA+ FA+ NN++FIETSAL++ NV AF+N++T
Sbjct: 139 EEAEKFAQSNNMAFIETSALNAKNVNIAFKNLIT 172
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 131/218 (60%), Gaps = 51/218 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T EDEYD+L+K+VL+G+SGVGKSNLL RFTRNEF+ + +STIGVEFATRSI +K I+A
Sbjct: 4 TGEDEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSIVYHEKNIRA 63
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAIT+AYYRGA+GAL+VYDI K ++E+VERWL EL ++AD+ ++ M++
Sbjct: 64 QIWDTAGQERYRAITNAYYRGALGALVVYDITKKSSFESVERWLNELHENADRKVLQMII 123
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G S DL
Sbjct: 124 GNKS---------------------------------------------------DLNQT 132
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V +E K AE N F ETSALD NVE AF +L
Sbjct: 133 REVTTEEGKKLAEDNKAFFFETSALDGNNVEDAFMTLL 170
>gi|225467903|ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
gi|147834571|emb|CAN69655.1| hypothetical protein VITISV_000615 [Vitis vinifera]
gi|296080913|emb|CBI18743.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 131/216 (60%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+ +YLFK+V+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+ + +D K +KAQI
Sbjct: 3 EEGEEYLFKIVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDIDGKEVKAQI 62
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGA GALLVYDI++ T+E++ RWL EL+ H D + MLVG
Sbjct: 63 WDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFESIARWLDELKIHCDTTVARMLVG- 121
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL ++R
Sbjct: 122 --------------------------------------------------NKCDLENIRD 131
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +E K AE L F+ETSALD+TNV+TAF+ ++
Sbjct: 132 VSTEEGKNLAEAEGLFFMETSALDATNVKTAFEMVI 167
>gi|356559913|ref|XP_003548240.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 244
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 131/216 (60%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ DY+FKVV+IGDS VGK+ +LSRF +NEF +SKSTIGVEF TR++ ++ K IKAQI
Sbjct: 26 QEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINAKVIKAQI 85
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRA+TSAYYRGA+GA+LVYDI K ++++V RW+ ELR HAD +IVIMLVG
Sbjct: 86 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLVG- 144
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL R
Sbjct: 145 --------------------------------------------------NKADLVDQRM 154
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP ++A FAE L F ETSAL NVE+AF +L
Sbjct: 155 VPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLL 190
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 131/215 (60%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+EYD+L+K+VL+G+SGVGKSNLL RFTRNEF+ + +STIGVEFATRSI K I+AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAIT+AYYRGA+GAL+VYDI K ++E+VE+WL EL ++AD+ +V M++G
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIG-- 122
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL R V
Sbjct: 123 -------------------------------------------------NKCDLSQTREV 133
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E + A++NN F ETSALD +NVE AF +L
Sbjct: 134 QTTEGEELAKKNNAFFFETSALDGSNVEEAFMTLL 168
>gi|356520251|ref|XP_003528777.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 245
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 131/216 (60%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ DY+FKVV+IGDS VGK+ +LSRF +NEF +SKSTIGVEF TR++ ++ K IKAQI
Sbjct: 26 QEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQI 85
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRA+TSAYYRGA+GA+LVYDI K ++++V RW+ ELR HAD +IVIMLVG
Sbjct: 86 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLVG- 144
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL R
Sbjct: 145 --------------------------------------------------NKADLVDQRM 154
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP ++A FAE L F ETSAL NVE+AF +L
Sbjct: 155 VPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLL 190
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 134/216 (62%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+ +YLFKVV+IGDS VGKSNLLSR+ RNEFN+ SK+TIGVEF T+S+++D K +KAQI
Sbjct: 4 EEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQI 63
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGAL+VYDI++ T+++V RWL EL+ H++ + MLVG
Sbjct: 64 WDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGN 123
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL ++R
Sbjct: 124 KS---------------------------------------------------DLENIRD 132
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +E K+ AE L FIETSALDSTNV+ AF+ ++
Sbjct: 133 VSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVI 168
>gi|399217959|emb|CCF74846.1| unnamed protein product [Babesia microti strain RI]
Length = 213
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 129/217 (59%), Gaps = 52/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRS-IQVDQKTIKAQ 63
+D YDYL+K+VLIGDS VGKSNLL+R+T+NEFNLESKSTIGVEFAT + I + K K Q
Sbjct: 4 DDSYDYLYKIVLIGDSNVGKSNLLTRYTKNEFNLESKSTIGVEFATNAHILKNGKVCKVQ 63
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAITSAYYRGAVGAL+ YDI ++ENV+RWL+ELRD+A + VI LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALICYDITSRSSFENVKRWLKELRDYAPPHSVICLVG 123
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
NK D+ +LR
Sbjct: 124 ---------------------------------------------------NKVDMVNLR 132
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V DE A N+ F+E SALDSTNV AF ++
Sbjct: 133 QVTKDEGAKLARLENILFLECSALDSTNVNAAFAELI 169
>gi|351725553|ref|NP_001235049.1| uncharacterized protein LOC100527366 [Glycine max]
gi|255632183|gb|ACU16451.1| unknown [Glycine max]
Length = 111
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/105 (87%), Positives = 102/105 (97%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLREL 109
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+EL
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL 111
>gi|255583461|ref|XP_002532489.1| protein with unknown function [Ricinus communis]
gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis]
Length = 222
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 132/217 (60%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++E DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 6 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKLIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GALLVYDI + T++NV++WL ELR++ + +V++L G
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVVVLAG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL H R
Sbjct: 125 --------------------------------------------------NKCDLSHTRE 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +E K AE L F+ETSAL++ NVE AF ++T
Sbjct: 135 VGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMIT 171
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 136/216 (62%), Gaps = 52/216 (24%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKTIKAQI 64
+ YD++FK+VL+GDSGVGKSNL+ RFT+NEFN +SKSTIGVEFAT+++Q+ D K +KAQI
Sbjct: 4 ESYDFIFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQI 63
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYR+I S+YYRGAVGALLVYD+ ++ +V WL+E+ ++A+++ +IMLVG
Sbjct: 64 WDTAGQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVG- 122
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL R
Sbjct: 123 --------------------------------------------------NKMDLHEQRT 132
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V + ++FA +N L+FIETSALD+T V+TAFQ IL
Sbjct: 133 VFVRDGRSFARKNGLAFIETSALDATGVDTAFQRIL 168
>gi|300176554|emb|CBK24219.2| unnamed protein product [Blastocystis hominis]
Length = 281
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 137/224 (61%), Gaps = 55/224 (24%)
Query: 1 MGTREDE--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK 58
M T E E YDYLF VLIGD+GVGK+N+L+R+ +NEF ++KST+GVEFA++ + +D K
Sbjct: 1 MSTAEPEERYDYLF--VLIGDTGVGKTNILTRYAKNEFYTDTKSTVGVEFASKCVTIDNK 58
Query: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI T++N+ WL EL ++D ++
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITVRSTFDNIGVWLAELSHYSDNDMT 118
Query: 119 IMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
I+LVG NK D
Sbjct: 119 IVLVG---------------------------------------------------NKCD 127
Query: 179 LRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
L +LR + + EA FAE++N++FIETSA DST ++ AF+ IL+
Sbjct: 128 LANLRVIESQEAVQFAEQHNIAFIETSAYDSTGIDKAFETILSG 171
>gi|145501753|ref|XP_001436857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834211|emb|CAI44483.1| rab_C72 [Paramecium tetraurelia]
gi|124404001|emb|CAK69460.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 134/219 (61%), Gaps = 51/219 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
E+EYD+LFK++LIGDSGVGK+N+L RF +NEF L+SK TIGVEF+T++I V+ K++K
Sbjct: 4 CNENEYDFLFKIILIGDSGVGKTNILQRFVKNEFILDSKPTIGVEFSTKTINVENKSVKC 63
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAIT+AYYRGAVGA + YDI + +T+ N+E+WL E++++A +NIVIM++
Sbjct: 64 QIWDTAGQERYRAITNAYYRGAVGAFVCYDITREITFTNIEKWLSEIKEYAPKNIVIMMI 123
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NK D +
Sbjct: 124 G---------------------------------------------------NKIDQAND 132
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
R V + EA ++N + +IETSA + NVE AF N+++
Sbjct: 133 RMVRSVEAAKLCQQNKIGYIETSAQNGLNVEEAFSNLVS 171
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 132/215 (61%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+YDYL+KVV+IGDSGVGKSNLL RFTR+EF+ E KSTIGVEF+++ I+ + +T++ QIW
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAIT+AYYRGA+GA+LVYD+ K ++E+++RWL ELRD+AD+ +V M+VG
Sbjct: 64 DTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVG-- 121
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL +R V
Sbjct: 122 -------------------------------------------------NKCDLEQMREV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E + A++ F ETSALD NVETAF I+
Sbjct: 133 TIKEGEDMAKKIGAFFFETSALDGKNVETAFMAII 167
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 133/216 (61%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++E DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R+++V KTIKAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GALL+YDI + +T++N+E+WL ELR + V++LVG
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVG- 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL R
Sbjct: 126 --------------------------------------------------NKSDLGQSRE 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +E KT AE L F+ETSAL++ NVE AF +++
Sbjct: 136 VEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMI 171
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 136/222 (61%), Gaps = 53/222 (23%)
Query: 1 MGTREDE--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK 58
M + +DE +YLFK+V+IGDS VGKSNLLSR+ RNEFNL SK+TIGVEF T+ + +D K
Sbjct: 1 MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGK 60
Query: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI++ T+++V RWL EL+ H+D +
Sbjct: 61 EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVA 120
Query: 119 IMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
+MLVG NK D
Sbjct: 121 MMLVG---------------------------------------------------NKCD 129
Query: 179 LRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
L ++R V ++ + AE L F+ETSALDSTNV+ AF+ ++
Sbjct: 130 LENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVI 171
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 127/211 (60%), Gaps = 51/211 (24%)
Query: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
YLFK+V+IGDS VGKSNLLSRF RNEF+ SK+TIGVEF T+ + +D K IKAQIWDTAG
Sbjct: 14 YLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEIKAQIWDTAG 73
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLR 129
QER+RA+TSAYYRGAVGAL+VYDI + ++++V+RWL EL H D I MLVG
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDITRRTSFDSVKRWLDELGTHCDTAIARMLVG------ 127
Query: 130 RYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADE 189
NK DL +R V DE
Sbjct: 128 ---------------------------------------------NKCDLDSIREVSRDE 142
Query: 190 AKTFAERNNLSFIETSALDSTNVETAFQNIL 220
K+ AE +L F+ETSALDSTNVE AF+ ++
Sbjct: 143 GKSLAEEESLFFMETSALDSTNVEAAFEVVI 173
>gi|145335857|ref|NP_173258.2| RAB GTPase homolog A6B [Arabidopsis thaliana]
gi|332320574|sp|Q0WQN4.2|RAA6B_ARATH RecName: Full=Ras-related protein RABA6b; Short=AtRABA6b
gi|332191565|gb|AEE29686.1| RAB GTPase homolog A6B [Arabidopsis thaliana]
Length = 229
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 133/216 (61%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++E DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R+++V KTIKAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GALL+YDI + +T++N+E+WL ELR + V++LVG
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVG- 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL R
Sbjct: 126 --------------------------------------------------NKSDLGQSRE 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +E KT AE L F+ETSAL++ NVE AF +++
Sbjct: 136 VEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMI 171
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 130/212 (61%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+V+IGDS VGKSNLLSR+ RNEFN SK+TIGVE T++++++ K +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVELETQNMEIEGKEVKAQIWDTA 69
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
QER+RA+TSAYYRGAVGAL+VYDI++ T+E+V RWL EL+ H+D + MLVG
Sbjct: 70 CQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVG----- 124
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL +RAV +
Sbjct: 125 ----------------------------------------------NKCDLESIRAVSVE 138
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDSTNV+TAF+ ++
Sbjct: 139 EGKALAETEGLFFMETSALDSTNVKTAFEMVI 170
>gi|224068050|ref|XP_002302656.1| predicted protein [Populus trichocarpa]
gi|222844382|gb|EEE81929.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 129/212 (60%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVV+IGDS VGK+ +LSRFT++EF +SKSTIGVEF TR++ + K IKAQIWDTA
Sbjct: 17 DYVFKVVVIGDSAVGKTQILSRFTKDEFCFDSKSTIGVEFQTRTVTIKGKVIKAQIWDTA 76
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGA+GA+L+YDI K T+++V RW+ ELR HAD +IVIML+G
Sbjct: 77 GQERYRAVTSAYYRGALGAMLLYDITKRPTFDHVVRWVDELRAHADNSIVIMLIG----- 131
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL LRAVPA+
Sbjct: 132 ----------------------------------------------NKVDLVDLRAVPAE 145
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+A FAE L F ETSA NV++AF +L
Sbjct: 146 DAVEFAEDQGLFFSETSAFSGDNVDSAFFRLL 177
>gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 133/216 (61%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++E DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R+++V KTIKAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GALL+YDI + +T++N+E+WL ELR + V++LVG
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVG- 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL R
Sbjct: 126 --------------------------------------------------NKSDLGQSRE 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +E KT AE L F+ETSAL++ NVE AF +++
Sbjct: 136 VEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMI 171
>gi|255585255|ref|XP_002533328.1| protein with unknown function [Ricinus communis]
gi|223526833|gb|EEF29049.1| protein with unknown function [Ricinus communis]
Length = 231
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 130/216 (60%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ DY+FKVV+IGDS VGK+ LLSRFT+NEF +SKSTIGVEF TR++ + K +KAQI
Sbjct: 14 QEKIDYVFKVVVIGDSAVGKTQLLSRFTKNEFCFDSKSTIGVEFQTRTVTIKGKVVKAQI 73
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRA+TSAYYRGA+GA+LVYDI K T+++V RW+ ELR HAD +IVI L+G
Sbjct: 74 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRATFDHVARWVEELRAHADNSIVITLIG- 132
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL RA
Sbjct: 133 --------------------------------------------------NKADLVDQRA 142
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP ++A FAE L F ETSAL NV+ AF +L
Sbjct: 143 VPTEDAVEFAEDQGLFFSETSALSGDNVDRAFFRLL 178
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 128/212 (60%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+VLIGDS VGKSNLL+RF RNEF+ SK+TIGVEF T+ + ++ K IKAQIWDTA
Sbjct: 12 EYLFKIVLIGDSAVGKSNLLARFARNEFDSNSKATIGVEFQTQVVDIEGKEIKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI + ++++V+RWL EL H D MLVG
Sbjct: 72 GQERFRAVTSAYYRGAVGALIVYDITRRSSFDSVKRWLEELSTHCDTTAARMLVG----- 126
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R V +
Sbjct: 127 ----------------------------------------------NKCDLENIREVSRE 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E KT AE +L F+ETSALDSTNVE AF+ ++
Sbjct: 141 EGKTLAEEESLFFMETSALDSTNVEAAFEVVI 172
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+VLIGDS VGKSNLLSRF RNEF+ SK+TIGVEF T+ +++D K IKAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEIDGKEIKAQIWDTA 69
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI++ T+++++RWL+EL D + MLVG
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRGTFDSIKRWLQELTTQNDSTVARMLVG----- 124
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R V +
Sbjct: 125 ----------------------------------------------NKCDLENIREVSTE 138
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K+ AE L F+ETSALD+TNV+TAF+ ++
Sbjct: 139 EGKSLAEEEGLFFMETSALDATNVQTAFEIVI 170
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 131/215 (60%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+YDYL+KVV+IGDSGVGKSNLL RFTR+EF+ E KSTIGVEF+++ I+ + +T++ QIW
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAIT+AYYRGA+GA+LVYD+ K ++E+++RWL ELRD+AD+ +V M+VG
Sbjct: 64 DTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVG-- 121
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL +R V
Sbjct: 122 -------------------------------------------------NKCDLEQMREV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E + A++ F ETSA D NVETAF I+
Sbjct: 133 SIKEGEDMAKKIGAFFFETSAFDGKNVETAFMAII 167
>gi|302142935|emb|CBI20230.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 125/217 (57%), Gaps = 73/217 (33%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFK F+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DDDYDYLFK----------------------FSLESKSTIGVEFATRSIRVDDKIVKAQI 44
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D +IVIMLVG
Sbjct: 45 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVGN 104
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
LR HLRA
Sbjct: 105 KGDLR---------------------------------------------------HLRA 113
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V D+AK FAER N F+ETSAL+S NVE AF +LT
Sbjct: 114 VSIDDAKAFAERENTFFMETSALESMNVENAFTEVLT 150
>gi|358248878|ref|NP_001239700.1| uncharacterized protein LOC100787725 [Glycine max]
gi|255639774|gb|ACU20180.1| unknown [Glycine max]
Length = 236
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 130/215 (60%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+ DY+FKVV+IGDS VGK+ +LSRF +NEF +SKSTIGVEF TR++ ++ K IKAQIW
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIW 78
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRA+TSAYYRGA+GA+LVYDI+K ++++V RW+ ELR HAD +IVIML+G
Sbjct: 79 DTAGQERYRAVTSAYYRGALGAMLVYDISKRQSFDHVARWVDELRAHADSSIVIMLIG-- 136
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL R V
Sbjct: 137 -------------------------------------------------NKGDLVDQRVV 147
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
A++A FAE L F ETSAL NVE+AF +L
Sbjct: 148 HAEDAVEFAEDQGLFFSETSALSGENVESAFFKLL 182
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 133/216 (61%), Gaps = 52/216 (24%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKTIKAQIWD 66
YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++Q+ + K KAQIWD
Sbjct: 7 YDYLFKIVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRNGKIAKAQIWD 66
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGA GA++VYDIA ++++V RWL EL ++ D N+VI+L G
Sbjct: 67 TAGQERYRAITSAYYRGARGAIVVYDIASRQSFQSVSRWLTELNEYGDANMVIVLAG--- 123
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL +LR V
Sbjct: 124 ------------------------------------------------NKSDLVNLREVS 135
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
++A+ FA+ NNL F ETS L+S NVETAF +L+A
Sbjct: 136 TEDAERFAKANNLLFFETSCLNSDNVETAFTELLSA 171
>gi|356512992|ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 217
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 130/217 (59%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++E DYLFK VLIGDSGVGKSN+LSRF ++EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 6 DEECDYLFKAVLIGDSGVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GA+LVYDI+ +YENV +WL ELR+ +++V++LVG
Sbjct: 66 WDTAGQERFRAITSSYYRGALGAMLVYDISMRSSYENVSKWLLELREFGGEDMVVVLVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL R
Sbjct: 125 --------------------------------------------------NKCDLDESRE 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +E K FAE L F+ETSAL + NVE F ++T
Sbjct: 135 VEKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMIT 171
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 130/216 (60%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ I+++ K IKAQI
Sbjct: 8 EKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEINGKEIKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S +L+D R
Sbjct: 128 KS--------------------------------DLKDA-------------------RE 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP E K+ AE L FIETSALDS+NV AFQ ++
Sbjct: 137 VPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVV 172
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 126/215 (58%), Gaps = 51/215 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YD L KVVLIGDSGVGK+N LSRF R EF SK TIGVEFAT+++ ++ IK QI
Sbjct: 8 DDDYDMLLKVVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTIEGDLIKCQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAIT+AYYRGAVGALLVYD+ + ++E++ RWL ELR+HA ++V+MLVG
Sbjct: 68 WDTAGQERYRAITNAYYRGAVGALLVYDVTRASSFESIPRWLNELREHASSDMVVMLVG- 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL R
Sbjct: 127 --------------------------------------------------NKTDLVDQRD 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNI 219
V + + A+R L FIETSALD +NVE AF +
Sbjct: 137 VSMQQGQELAQREGLLFIETSALDGSNVEQAFSRV 171
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 130/212 (61%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+V+IGDS VGKSNLL+R+ RNEFNL SK+TIGVEF T+++++D K +KAQIWDTA
Sbjct: 2 EYLFKIVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEIDGKEVKAQIWDTA 61
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGA GAL+VYDI + T++++ RWL EL+ H+D + MLVG
Sbjct: 62 GQERFRAVTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVG----- 116
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++RAV +
Sbjct: 117 ----------------------------------------------NKCDLDNIRAVSVE 130
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K+ AE + F+ETSALD+TNV AF ++
Sbjct: 131 EGKSLAESEGMFFMETSALDATNVNKAFDMVI 162
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 52/221 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG +D +YLFK+VLIGDS VGKSNLLSRF+R+EF+ SK+TIGVEF T+ ++++ K
Sbjct: 1 MGKEDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKE 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQER+RA+TSAYYRGA GAL+VYDI + T+E+V+RWL+EL H D +
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRSDTFESVKRWLQELNTHCDTAVAQ 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NK DL
Sbjct: 121 MLVG---------------------------------------------------NKCDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+RAV +E K AE L F+ETSALD+TNV+ AF+ ++
Sbjct: 130 EDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVI 170
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 128/212 (60%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+VLIGDS VGKSNLLSRF RNEF+ SK+TIGVEF T+++++D K +KAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKEVKAQIWDTA 69
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGA GAL+VYDI++ T+++++RWL EL D + MLVG
Sbjct: 70 GQERFRAVTSAYYRGAFGALVVYDISRRGTFDSIKRWLDELTTQNDSTVARMLVG----- 124
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL LR V +
Sbjct: 125 ----------------------------------------------NKCDLESLREVSTE 138
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K FAE L F+ETSALDSTNV+ AF+ ++
Sbjct: 139 EGKAFAEEEGLFFMETSALDSTNVQKAFEIVI 170
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/221 (46%), Positives = 133/221 (60%), Gaps = 52/221 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG +D +YLFK+VLIGDS VGKSNLLSRF+R+EF+ SK+TIGVEF T+ ++++ K
Sbjct: 1 MGKEDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKE 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQER+RA+TSAYYRGA GAL+VYDI + T+E+V+RWL+EL H D +
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQ 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NK DL
Sbjct: 121 MLVG---------------------------------------------------NKCDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+RAV +E K AE L F+ETSALD+TNV+ AF+ ++
Sbjct: 130 EDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVI 170
>gi|449463200|ref|XP_004149322.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
gi|449507589|ref|XP_004163075.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
Length = 215
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 127/212 (59%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+YLFK+VLIGDS VGKSNLLSRF RNEF+ SK+TIGVEF T+ +++D K +KAQIWDTA
Sbjct: 11 EYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKAQIWDTA 70
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGAL+VYDI + T+++ +RWL EL H D V MLVG
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATVRMLVG----- 125
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL ++R V +
Sbjct: 126 ----------------------------------------------NKCDLENIRDVSVE 139
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDSTNV TAF+ ++
Sbjct: 140 EGKNLAEEEGLFFMETSALDSTNVRTAFELVI 171
>gi|255644772|gb|ACU22888.1| unknown [Glycine max]
Length = 236
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 128/215 (59%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+ DY+FKVV+IGDS VGK+ +LSRF +NEF SKSTIGVEF TRS+ ++ K IKAQIW
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIW 78
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRA+TSAYYRGA+GA+LVYDI K ++++V RW+ ELR HAD +IVIML+G
Sbjct: 79 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIG-- 136
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL R V
Sbjct: 137 -------------------------------------------------NKGDLVDQRVV 147
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
A++A FAE L F ETSAL NVE++F +L
Sbjct: 148 HAEDAVEFAEDQGLFFSETSALSGENVESSFFKLL 182
>gi|356573249|ref|XP_003554775.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 236
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 128/215 (59%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+ DY+FKVV+IGDS VGK+ +LSRF +NEF SKSTIGVEF TRS+ ++ K IKAQIW
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIW 78
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRA+TSAYYRGA+GA+LVYDI K ++++V RW+ ELR HAD +IVIML+G
Sbjct: 79 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIG-- 136
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL R V
Sbjct: 137 -------------------------------------------------NKGDLVDQRVV 147
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
A++A FAE L F ETSAL NVE++F +L
Sbjct: 148 HAEDAVEFAEDQGLFFSETSALSGENVESSFFKLL 182
>gi|1370144|emb|CAA98178.1| RAB11B [Lotus japonicus]
Length = 242
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 129/215 (60%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+ DY+FKVV+IGDS VGK+ +LSRF +NEF +SK+TIGVEF TR++ ++ K IKAQIW
Sbjct: 22 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIW 81
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRA+TSAYYRGA+GA+LVYDI K ++++V RW+ ELR HAD +IVIML+G
Sbjct: 82 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIG-- 139
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL R V
Sbjct: 140 -------------------------------------------------NKGDLVDQRVV 150
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+++A FAE L F ETSAL NVE+AF +L
Sbjct: 151 LSEDAVEFAEEQGLFFSETSALTGENVESAFLKLL 185
>gi|403370738|gb|EJY85236.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 249
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 134/217 (61%), Gaps = 52/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQ-KTIKAQ 63
+D YDYLFK+V++GDSGVGKSNLL R+T+NEFN+ S T+G+EFAT++IQ Q + I+AQ
Sbjct: 2 DDNYDYLFKLVMLGDSGVGKSNLLMRYTKNEFNVNSTMTMGIEFATKTIQTAQNQIIRAQ 61
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDT GQERYR++TSAYYRGAVGAL+VYD+ +++NV+ WL+ELR A+ NIV++LVG
Sbjct: 62 IWDTCGQERYRSLTSAYYRGAVGALMVYDVTSQKSFDNVQVWLKELRQFAESNIVVLLVG 121
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
NK DL+ R
Sbjct: 122 ---------------------------------------------------NKIDLKDKR 130
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++A FA+ ++FIETSAL+ +NV+ AF+ I+
Sbjct: 131 EVRKEDASQFAQEQGIAFIETSALECSNVDIAFERII 167
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 127/211 (60%), Gaps = 51/211 (24%)
Query: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
YLFK+VLIGDS VGKSNLLSRF RNEF+ SK+TIGVEF T+ +++D K +KAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAG 71
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLR 129
QER+RA+TSAYYRGA GAL+VYDI++ T+E+++RWL EL D + MLVG
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVG------ 125
Query: 130 RYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADE 189
NK DL ++R V +E
Sbjct: 126 ---------------------------------------------NKCDLENIREVSIEE 140
Query: 190 AKTFAERNNLSFIETSALDSTNVETAFQNIL 220
K AE L F+ETSALDSTNV+TAF+ ++
Sbjct: 141 GKALAEEEGLFFMETSALDSTNVQTAFEIVI 171
>gi|297850210|ref|XP_002892986.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338828|gb|EFH69245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 132/216 (61%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++E DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R+++V KTIKAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GALL+YDI + +T++N+ +WL ELR + V++LVG
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIGKWLSELRGFSSPETVVVLVG- 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL R
Sbjct: 126 --------------------------------------------------NKSDLGQSRE 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +E KT AE L F+ETSAL++ NVE AF +++
Sbjct: 136 VEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMI 171
>gi|356524680|ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 218
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 131/218 (60%), Gaps = 52/218 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++E DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 6 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GA+LVYDI++ +YENV +WL ELR+ +++V++LVG
Sbjct: 66 WDTAGQERFRAITSSYYRGALGAMLVYDISRRSSYENVSKWLLELREFGGEDMVVVLVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR-HLR 183
NK DL R
Sbjct: 125 --------------------------------------------------NKCDLDGQSR 134
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +E K FAE L F+ETSAL + NVE F ++T
Sbjct: 135 EVDKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMIT 172
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 126/212 (59%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG S L
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRQQTFQSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
+ +R VP
Sbjct: 132 ---------------------------------------------------KGIREVPTS 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDS+NV AF+ ++
Sbjct: 141 EGKALAEAQGLFFMETSALDSSNVAAAFETVV 172
>gi|388514165|gb|AFK45144.1| unknown [Lotus japonicus]
Length = 242
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 128/215 (59%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+ DY+FKVV+IGDS VGK+ +LSRF +NEF +SK+TIGVEF TR++ ++ K IKAQIW
Sbjct: 22 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIW 81
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRA+TSAYYRGA+GA+LVYDI K ++++V RW+ ELR HAD +IVIML+G
Sbjct: 82 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIG-- 139
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK D R V
Sbjct: 140 -------------------------------------------------NKGDFVDQRVV 150
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+++A FAE L F ETSAL NVE+AF +L
Sbjct: 151 LSEDAVEFAEEQGLFFSETSALTGGNVESAFLKLL 185
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 130/216 (60%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ ++++ K +KAQI
Sbjct: 8 EKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S +L+D R
Sbjct: 128 KS--------------------------------DLKDA-------------------RE 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP E K AE L F+ETSALDS+NV +AFQ ++
Sbjct: 137 VPTPEGKALAEAQGLFFMETSALDSSNVVSAFQTVV 172
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 128/212 (60%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ I ++ K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIVINGKEIKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG S
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRVQTFQSIGRWLNELHTHSDMNVVTILVGNKS-- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
+L+D +R VP
Sbjct: 130 ------------------------------DLKD-------------------IREVPTS 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDS+NV AF+ ++
Sbjct: 141 EGKALAEAQGLFFMETSALDSSNVAAAFETVV 172
>gi|5926718|dbj|BAA84640.1| PRA2 [Pisum sativum]
Length = 233
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 128/216 (59%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ DY+FKVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF T+++ ++ K IKAQI
Sbjct: 14 QEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQI 73
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRA+TSAYYRGA+GA+LVYDI K T+++V RW+ ELR HAD +IVIML+G
Sbjct: 74 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLIG- 132
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL R
Sbjct: 133 --------------------------------------------------NKGDLVDQRG 142
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++A FAE L F ETSA NV +AF +L
Sbjct: 143 VQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLL 178
>gi|430811332|emb|CCJ31255.1| unnamed protein product [Pneumocystis jirovecii]
Length = 144
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 115/183 (62%), Gaps = 52/183 (28%)
Query: 38 LESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHL 97
LESKSTIGVEFATRSIQVD KTIKAQIWDTAGQERYRAITSAY GAVGALLVYDI+K
Sbjct: 12 LESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYV-GAVGALLVYDISKQT 70
Query: 98 TYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWL 157
T+EN++RWL+ELRDHAD NIVIMLVG S LR
Sbjct: 71 TFENIQRWLKELRDHADSNIVIMLVGNKSDLR---------------------------- 102
Query: 158 RELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQ 217
HLRAV D+ K F+ N LSFIETSALDSTNV+ AFQ
Sbjct: 103 -----------------------HLRAVSTDDGKNFSTTNGLSFIETSALDSTNVDCAFQ 139
Query: 218 NIL 220
+IL
Sbjct: 140 DIL 142
>gi|303736|dbj|BAA02109.1| GTP-binding protein [Pisum sativum]
gi|738934|prf||2001457B GTP-binding protein
Length = 222
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 128/216 (59%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ DY+FKVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF T+++ ++ K IKAQI
Sbjct: 3 QEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQI 62
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRA+TSAYYRGA+GA+LVYDI K T+++V RW+ ELR HAD +IVIML+G
Sbjct: 63 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLIG- 121
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL R
Sbjct: 122 --------------------------------------------------NKGDLVDQRG 131
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++A FAE L F ETSA NV +AF +L
Sbjct: 132 VQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLL 167
>gi|217069930|gb|ACJ83325.1| unknown [Medicago truncatula]
Length = 108
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/102 (87%), Positives = 99/102 (97%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL 106
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWL 108
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 128/218 (58%), Gaps = 52/218 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQ-KTIKAQ 63
+ YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ ++ K KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNNGKIAKAQ 63
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAITSAYYRGA+GA++VYDIA ++ +V +WL EL D+AD NI I LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIIVYDIACKASFSSVSKWLTELHDYADANITICLVG 123
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S DL HLR
Sbjct: 124 NKS---------------------------------------------------DLTHLR 132
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ + FA N+L F ETS L+S NV+ AF+ +L+
Sbjct: 133 EVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLS 170
>gi|440793980|gb|ELR15151.1| Rab11/RabAfamily small GTPase [Acanthamoeba castellanii str. Neff]
Length = 186
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 126/179 (70%), Gaps = 22/179 (12%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YD+LFKVVL+GDS VGKSNLLSRFTR+EF L+ KSTIG
Sbjct: 10 DYDHLFKVVLVGDSAVGKSNLLSRFTRDEFTLDCKSTIG--------------------- 48
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
AGQERYRAITS YYRGAVGAL+VYDI T++N+++WL E+++HA ++++M +
Sbjct: 49 -AGQERYRAITSTYYRGAVGALMVYDITNAETFKNLDKWLNEVKEHAPTHVIVMCERYRA 107
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
+ YYRGAVGAL+VYDI T++N+++WL E+++HA ++++MLVGNK DL R V
Sbjct: 108 ITSTYYRGAVGALMVYDITNAETFKNLDKWLNEVKEHAPTHVIVMLVGNKLDLDFRRQV 166
>gi|15219515|ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana]
gi|75333591|sp|Q9C9U7.1|RAA6A_ARATH RecName: Full=Ras-related protein RABA6a; Short=AtRABA6a
gi|12324223|gb|AAG52089.1|AC012679_27 putative ras-related GTP-binding protein; 14977-15931 [Arabidopsis
thaliana]
gi|21537030|gb|AAM61371.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332197367|gb|AEE35488.1| RAB GTPase A6a [Arabidopsis thaliana]
Length = 233
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 128/214 (59%), Gaps = 51/214 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T E+E DYLFK VLIGDS VGKSNLLSRF+++EF +SK TIGVEFA R++ V K IKA
Sbjct: 5 TYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKA 64
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQER+RAITS+YYRGA+GALL+YDI + T++N+++WL ELRD A+ V++LV
Sbjct: 65 QIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLV 124
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G S LR+
Sbjct: 125 GNKSDLRQS--------------------------------------------------- 133
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAF 216
R V DE KT AE L F+ETSAL++ NVE AF
Sbjct: 134 REVEEDEGKTLAESEGLYFLETSALENVNVEEAF 167
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 128/216 (59%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + ++ K +KAQI
Sbjct: 8 EKTEDYLFKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLDINGKEVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL+ H+D N+V +LVG
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S +LRD R
Sbjct: 128 KS--------------------------------DLRDA-------------------RE 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V E K AE L F+ETSALDS+NV AFQ ++
Sbjct: 137 VSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVV 172
>gi|224139494|ref|XP_002323139.1| predicted protein [Populus trichocarpa]
gi|222867769|gb|EEF04900.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 127/212 (59%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGALLVYDI++ T+++V RWL EL H+D N+V +LVG S
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNKS-- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
+L+D R VP
Sbjct: 130 ------------------------------DLKDA-------------------REVPTV 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDS+NV AFQ ++
Sbjct: 141 EGKDLAEAQGLFFMETSALDSSNVAAAFQTVV 172
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 126/211 (59%), Gaps = 51/211 (24%)
Query: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
YLFK+VLIGDS VGKSNLLSRF RNEF+ SK+TIGVE T+ +++D K +KAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVELQTQMVEIDGKEVKAQIWDTAG 71
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLR 129
QER+RA+TSAYYRGA GAL+VYDI++ T+E+++RWL EL D + MLVG
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVG------ 125
Query: 130 RYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADE 189
NK DL ++R V +E
Sbjct: 126 ---------------------------------------------NKCDLENIREVSIEE 140
Query: 190 AKTFAERNNLSFIETSALDSTNVETAFQNIL 220
K AE L F+ETSALDSTNV+TAF+ ++
Sbjct: 141 GKALAEEEGLFFMETSALDSTNVQTAFEIVI 171
>gi|297839229|ref|XP_002887496.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
gi|297333337|gb|EFH63755.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 127/212 (59%), Gaps = 51/212 (24%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+E DYLFK VLIGDS VGKSNLLSRF+++EF +SK TIGVEFA R++ V K IKAQI
Sbjct: 7 EEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GALL+YDI + T++N+++WL ELRD A+ V++LVG
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR+ R
Sbjct: 127 KSDLRQS---------------------------------------------------RE 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAF 216
V DE KT AE L F+ETSAL++ NVE AF
Sbjct: 136 VEEDEGKTLAESEGLFFLETSALENVNVEEAF 167
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 52/212 (24%)
Query: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKTIKAQIWDTA 68
Y FK+VL+GDSGVGKSNL+ RFT+NEFN +SKSTIGVEFAT+++Q+ D K +KAQIWDTA
Sbjct: 1 YSFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTA 60
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYR+I S+YYRGAVGALLVYD+ ++ +V WL+E+ ++A+++ +IMLVG
Sbjct: 61 GQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVG----- 115
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK DL R V
Sbjct: 116 ----------------------------------------------NKMDLHEQRTVFVR 129
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ ++FA +N L+FIETSALD+T V+TAFQ IL
Sbjct: 130 DGRSFARKNGLAFIETSALDATGVDTAFQRIL 161
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 130/219 (59%), Gaps = 52/219 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKTIKAQ 63
E YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ + + KT KAQ
Sbjct: 4 EHNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKNGKTAKAQ 63
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAITSAYYRGA GA++VYDIA ++ NV RWL EL ++ D N++I LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLTELNEYGDPNMIIALVG 123
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S DL HLR
Sbjct: 124 NKS---------------------------------------------------DLTHLR 132
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
V +++ + +A NNL F ETS L++ N++TAF +L++
Sbjct: 133 EVSSEDGERYAHSNNLMFFETSCLNNENIDTAFTELLSS 171
>gi|449677940|ref|XP_002159779.2| PREDICTED: ras-related protein Rab-11B-like, partial [Hydra
magnipapillata]
Length = 162
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 101/163 (61%), Positives = 106/163 (65%), Gaps = 51/163 (31%)
Query: 58 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNI 117
K IKAQIWDTAGQERYRAITSA
Sbjct: 2 KVIKAQIWDTAGQERYRAITSA-------------------------------------- 23
Query: 118 VIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKS 177
YYRGAVGALLVYDIAKH+TYENVERWL+ELRDHAD NIVIMLVGNKS
Sbjct: 24 -------------YYRGAVGALLVYDIAKHITYENVERWLKELRDHADANIVIMLVGNKS 70
Query: 178 DLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
DLRHLRAVP +EAK FAE+N LSFIETSALDSTNVE AF+NIL
Sbjct: 71 DLRHLRAVPTEEAKAFAEKNELSFIETSALDSTNVEVAFRNIL 113
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 128/212 (60%), Gaps = 51/212 (24%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ DYLFK VL GDSGVGKSNLLSRF++NEF +S+ TIGVEFA R+I+V K +K QI
Sbjct: 6 DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GALLVYDI + T++N+++WLRELR+ + +VI+LVG
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL R
Sbjct: 125 --------------------------------------------------NKCDLHQSRE 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAF 216
V +EA+ AE NL F+ETSA D+ NVE AF
Sbjct: 135 VQEEEARHLAELENLFFMETSAKDNLNVEEAF 166
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 130/217 (59%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E+E DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 9 EEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 68
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GALLVYDI + +YE+V RWL ELR+ + +V++LVG
Sbjct: 69 WDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVG- 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL R
Sbjct: 128 --------------------------------------------------NKCDLGESRE 137
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +EAK FAE L F+ETSAL + NVE F ++T
Sbjct: 138 VEEEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMIT 174
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 129/217 (59%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ DYLFK VLIGDSGVGKSNL+SRF ++EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GA+LVYDI K T+ NV +WL ELR+ +++V++LVG
Sbjct: 68 WDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL R
Sbjct: 128 KS---------------------------------------------------DLDQSRQ 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +E K FAE L F+ETSAL + NV+ AF ++T
Sbjct: 137 VEREEGKVFAETEELCFMETSALQNLNVDEAFLEMIT 173
>gi|326491937|dbj|BAJ98193.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496867|dbj|BAJ98460.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 129/220 (58%), Gaps = 52/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G +E E DY+FKVV++GDS VGK+ LL RF ++EF L+SKSTIGVEF TR++ + +K +K
Sbjct: 16 GEKEGEIDYVFKVVVVGDSAVGKTQLLGRFAKDEFFLDSKSTIGVEFQTRTLTLHRKRVK 75
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSA
Sbjct: 76 AQIWDTAGQERYRAVTSA------------------------------------------ 93
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR- 180
YYRGA+GA++VYD+ + T+++V RW+ ELR HAD + V+ LVGNK+D
Sbjct: 94 ---------YYRGALGAMVVYDVTRRATFDHVPRWVEELRAHADGSTVVALVGNKADAPA 144
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
H R VPADEA FAE L F E SAL NVE AF +L
Sbjct: 145 HRREVPADEAARFAEEQGLFFSEASALTGDNVERAFLALL 184
>gi|224086488|ref|XP_002307897.1| predicted protein [Populus trichocarpa]
gi|222853873|gb|EEE91420.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 126/212 (59%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFK+VLIGDS VGKSNLL+RF RNEF SKSTIGVEF T+ + ++ K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARNEFYPSSKSTIGVEFQTQKMDINGKEIKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGALLVYDI++ T++++ +WL EL H+D N+V +LVG S
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGKWLNELHTHSDMNVVTILVGNKS-- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
+L+D R V
Sbjct: 130 ------------------------------DLKDA-------------------REVSTA 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDS+NV AFQ ++
Sbjct: 141 EGKALAEAQGLFFMETSALDSSNVAAAFQTVV 172
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 126/212 (59%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ I ++ K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVG S
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRKQTFHSIGRWLNELHTHSDMNVVTILVGNKS-- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
+L+D +R VP
Sbjct: 130 ------------------------------DLKD-------------------IREVPTA 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSA DS+NV AF+ ++
Sbjct: 141 EGKALAEAQGLFFMETSARDSSNVAAAFETVV 172
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 128/218 (58%), Gaps = 52/218 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQ-KTIKAQ 63
+ YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ ++ K KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVVLNNGKIAKAQ 63
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAITSAYYRGA+GA++VYDIA ++ +V +WL EL D+AD NI I LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIVVYDIACKSSFVSVSKWLTELHDYADGNITICLVG 123
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S DL HLR
Sbjct: 124 NKS---------------------------------------------------DLTHLR 132
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ + FA N+L F ETS L+S NV+ AF+ +L+
Sbjct: 133 EVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLS 170
>gi|300174998|emb|CBK20309.2| unnamed protein product [Blastocystis hominis]
Length = 183
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 129/209 (61%), Gaps = 51/209 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
F VVLIGDS VGK+N+LSRF +EFNL+SK+T+GVEF+ + ++V+ IKAQIWDTAGQE
Sbjct: 18 FVVVLIGDSNVGKTNILSRFANDEFNLDSKATVGVEFSAKCVKVNNSIIKAQIWDTAGQE 77
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
RYR+ITSAYYRGAVGAL+VYDI ++ENVE WL ELR H+D ++V++L+G
Sbjct: 78 RYRSITSAYYRGAVGALMVYDITSRSSFENVEGWLSELRQHSDGDMVVVLIG-------- 129
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
NK DL + R++ DEA+
Sbjct: 130 -------------------------------------------NKCDLANQRSISTDEAR 146
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNIL 220
+AE++N++FIETSA + T ++ AF +L
Sbjct: 147 AYAEKHNMAFIETSAYERTGIDEAFTMVL 175
>gi|125553326|gb|EAY99035.1| hypothetical protein OsI_20993 [Oryza sativa Indica Group]
Length = 181
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 115/186 (61%), Gaps = 51/186 (27%)
Query: 36 FNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAK 95
+LESKSTIGVEFATRSI VD K +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+ +
Sbjct: 1 MSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTR 60
Query: 96 HLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVER 155
H+T+ENVERW+REL+DH D NIVIMLVG + LR
Sbjct: 61 HVTFENVERWMRELKDHTDANIVIMLVGNKADLR-------------------------- 94
Query: 156 WLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETA 215
HLRAV ++AK FAE+ N F+ETSAL+S NVE A
Sbjct: 95 -------------------------HLRAVSTEDAKAFAEKENTFFMETSALESMNVENA 129
Query: 216 FQNILT 221
F +LT
Sbjct: 130 FTEVLT 135
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 126/212 (59%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVG S
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKS-- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
+L+D LR V
Sbjct: 130 ------------------------------DLKD-------------------LREVSTA 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDS+NV AF+ ++
Sbjct: 141 EGKALAEAQGLFFMETSALDSSNVAAAFETVV 172
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 129/218 (59%), Gaps = 53/218 (24%)
Query: 5 EDEY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
EDE DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ I ++ K IKA
Sbjct: 6 EDEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIKA 65
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQER+RA+TSAYYRGAVGAL+VYDI++ T++++ RWL EL H+D N+V +LV
Sbjct: 66 QIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G S +L+D
Sbjct: 126 GNKS--------------------------------DLKD-------------------A 134
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V E K AE L F+ETSALDS+NV AFQ ++
Sbjct: 135 REVTTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVV 172
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 128/218 (58%), Gaps = 52/218 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
+E E DY+FKVV++GDS VGK+ LL RFT++EF L+SKSTIGVEF TR++ + +K +KAQ
Sbjct: 23 KEAEIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQ 82
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRA+TSAYYRGA+GA++VYDI + T+ENV RW+ ELR HAD + V+ L+G
Sbjct: 83 IWDTAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIG 142
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL-RHL 182
NK+D+
Sbjct: 143 ---------------------------------------------------NKADMPASR 151
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V ADEA FAE L F E SAL NVE AF +L
Sbjct: 152 REVAADEAARFAEEQGLFFSEASALSGDNVERAFLTLL 189
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 126/212 (59%), Gaps = 51/212 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+RA+TSAYYRGAVGALLVYDI++ T+ ++ RWL EL H+D N+V +LVG S
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKS-- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
+L+D LR V
Sbjct: 130 ------------------------------DLKD-------------------LREVSTA 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K AE L F+ETSALDS+NV AF+ ++
Sbjct: 141 EGKALAEAQGLFFMETSALDSSNVAAAFETVV 172
>gi|30677910|ref|NP_171628.2| Rab family protein [Arabidopsis thaliana]
gi|75174997|sp|Q9LNK1.1|RABA3_ARATH RecName: Full=Ras-related protein RABA3; Short=AtRABA3
gi|9665141|gb|AAF97325.1|AC023628_6 Putative GTP-binding protein [Arabidopsis thaliana]
gi|38454140|gb|AAR20764.1| At1g01200 [Arabidopsis thaliana]
gi|38604028|gb|AAR24757.1| At1g01200 [Arabidopsis thaliana]
gi|332189132|gb|AEE27253.1| Rab family protein [Arabidopsis thaliana]
Length = 237
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 129/219 (58%), Gaps = 52/219 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T ++ DY+FKVV+IGDS VGK+ LLSRFT NEF +SKSTIGVEF TR+I + K +KA
Sbjct: 20 TMPEKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKA 79
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI K L++++V RW+ ELR HAD + VIMLV
Sbjct: 80 QIWDTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLV 139
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR-H 181
G NK+DL
Sbjct: 140 G---------------------------------------------------NKADLSVG 148
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
RAVP ++A FAE L F E SAL NV+ AF +L
Sbjct: 149 KRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLL 187
>gi|297842990|ref|XP_002889376.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
gi|297335218|gb|EFH65635.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 130/219 (59%), Gaps = 52/219 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T ++ DY+FKVV+IGDS VGK+ LLSRFT+NEF +SKSTIGVEF TR++ + K +KA
Sbjct: 20 TMPEKIDYVFKVVVIGDSAVGKTQLLSRFTQNEFCYDSKSTIGVEFQTRTVTLQGKLVKA 79
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI K +++++V RW+ ELR HAD + VIMLV
Sbjct: 80 QIWDTAGQERYRAVTSAYYRGALGAMVVYDITKRVSFDHVARWVEELRAHADDSAVIMLV 139
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR-H 181
G NK+DL
Sbjct: 140 G---------------------------------------------------NKADLAVD 148
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
RAVP ++A FAE L F E SAL NV+ AF +L
Sbjct: 149 KRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLL 187
>gi|357117593|ref|XP_003560549.1| PREDICTED: ras-related protein RABA3-like [Brachypodium distachyon]
Length = 233
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 128/212 (60%), Gaps = 47/212 (22%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVV+IGDSGVGK+ LL RFTR+EF L+SKSTIG+EF TR++ + K +KAQIWDTA
Sbjct: 12 DYVFKVVVIGDSGVGKTQLLGRFTRDEFCLDSKSTIGIEFQTRTVLLAGKRVKAQIWDTA 71
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGA+GA+LVYD+ + ++E+ RW+ ELR HAD++IV++L+G +
Sbjct: 72 GQERYRAVTSAYYRGALGAMLVYDVTRRDSFEHAARWVAELRAHADKSIVVVLIGNKA-- 129
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
++ + VG RAV +
Sbjct: 130 --------------------------------------DLAVAAVGR-------RAVDVE 144
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
EA FAE L F E SAL NVE AF +L
Sbjct: 145 EATAFAEEQGLFFYEASALSGDNVEAAFLGLL 176
>gi|66807211|ref|XP_637328.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122086021|sp|Q54KM9.1|RB11B_DICDI RecName: Full=Ras-related protein Rab-11B
gi|2708641|gb|AAB92559.1| GTPase rab11b [Dictyostelium discoideum]
gi|60465730|gb|EAL63807.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 220
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 130/214 (60%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYL K+V+IGDSGVGKSNLLSR+ +NEF++ STIGVEF+T+++++D K IK Q+WD
Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWD 66
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQE+Y +IT +YY+GA+GAL+VY+IA ++ N+E+WL++ R++A Q+ IMLVG S
Sbjct: 67 TAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKS 126
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
L+ Y R V
Sbjct: 127 DLKEY---------------------------------------------------REVS 135
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E K FAE++ + FIETSALDS NVETAF N+
Sbjct: 136 TLEGKQFAEKHYMQFIETSALDSNNVETAFNNLF 169
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 128/216 (59%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K +KAQI
Sbjct: 8 EKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T+++V +WL EL H+D N+V +LVG
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGKWLNELHTHSDMNVVTILVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S +L+D R
Sbjct: 128 KS--------------------------------DLKDA-------------------RE 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V E K AE +L F+ETSALDS+NV AFQ ++
Sbjct: 137 VSTAEGKALAETQDLFFMETSALDSSNVTAAFQTVV 172
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 130/217 (59%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++E DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 8 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GALLVYDI + +YE+V RWL ELR+ + +V++LVG
Sbjct: 68 WDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVG- 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL R
Sbjct: 127 --------------------------------------------------NKCDLGESRE 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +EAK FAE L F+ETSAL + NVE F ++T
Sbjct: 137 VEEEEAKRFAEAEGLCFMETSALKNLNVEQVFLQMIT 173
>gi|5714660|gb|AAD48019.1| Rab GTP-binding protein Rab11b [Gossypium hirsutum]
Length = 224
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 127/216 (58%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E DYLFK+VL GDS VGKSNLL+RF RNEF +SKSTIGVE T+ + ++ K +KAQI
Sbjct: 8 EKTEDYLFKIVLDGDSAVGKSNLLARFARNEFYPDSKSTIGVELQTQKLDINGKEVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL+ H+D N+V +LVG
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S +LRD R
Sbjct: 128 KS--------------------------------DLRDA-------------------RE 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V E K AE L F+ETSALDS+NV AFQ ++
Sbjct: 137 VSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVV 172
>gi|356535256|ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
Length = 223
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 127/216 (58%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K +KAQI
Sbjct: 8 EKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S +L+D R
Sbjct: 128 KS--------------------------------DLKDA-------------------RE 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V E K AE L F+ETSALDS+NV AF+ ++
Sbjct: 137 VATAEGKALAEAQGLFFMETSALDSSNVAAAFETVV 172
>gi|363807622|ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
gi|255641449|gb|ACU21000.1| unknown [Glycine max]
Length = 226
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 127/216 (58%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++ K +KAQI
Sbjct: 8 EKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RA+TSAYYRGAVGALLVYDI++ T++++ RWL EL H+D N+V +LVG
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S +L+D R
Sbjct: 128 KS--------------------------------DLKDA-------------------RK 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V E K AE L F+ETSALDS+NV AF+ ++
Sbjct: 137 VATAEGKALAEAQGLFFMETSALDSSNVAAAFETVV 172
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 128/217 (58%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ DYLFK VLIGDSGVGKSNL+SRF ++EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+GA+LVYDI K T+ NV +WL ELR+ +++V++LVG
Sbjct: 68 WDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL R
Sbjct: 128 KS---------------------------------------------------DLDQSRQ 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +E K AE L F+ETSAL + NV+ AF ++T
Sbjct: 137 VEREEGKVVAETEELCFMETSALQNLNVDEAFLEMIT 173
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 127/214 (59%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+ D L+KVV+IGDSGVGKSNL++RFT+N+F ++K TIGVEF +SI+ D TIK QIWD
Sbjct: 2 DCDVLYKVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEYDGVTIKGQIWD 61
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQER+RAI++AYYRGA GAL+VYDI +++N+E+W +E+ + + + +LVG
Sbjct: 62 TAGQERFRAISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGENGCINILVG--- 118
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NK DL HLR V
Sbjct: 119 ------------------------------------------------NKCDLNHLRQVE 130
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ FAE++N+SF+ETSALDSTNV+ AF +L
Sbjct: 131 TATGRAFAEKHNVSFMETSALDSTNVDEAFTTLL 164
>gi|440494412|gb|ELQ76793.1| GTPase Rab11/YPT3, small G protein superfamily [Trachipleistophora
hominis]
Length = 207
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 129/218 (59%), Gaps = 52/218 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+ YDYLFK+VLIGDSGVGK+NLLS+ TR EF+ E+K+TIGVEFAT++ ++D IKAQIW
Sbjct: 2 ENYDYLFKIVLIGDSGVGKTNLLSQLTRKEFSAETKATIGVEFATKTFKIDSLVIKAQIW 61
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVER-WLRELRDHADQNIVIMLVGP 124
DTAGQERYRAITSAYYRG +GAL+VYDI + T N + WL +L++++ + I IMLVG
Sbjct: 62 DTAGQERYRAITSAYYRGTLGALVVYDITRKSTLSNATKHWLTQLKEYSGEEIEIMLVG- 120
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL R
Sbjct: 121 --------------------------------------------------NKTDLEDERT 130
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
V A+ NNL+F+ETSALD +NVE AF+ ++ A
Sbjct: 131 VTVACGNDAAKSNNLNFLETSALDGSNVEKAFEELIKA 168
>gi|70937938|ref|XP_739710.1| small GTPase Rab11 [Plasmodium chabaudi chabaudi]
gi|56516907|emb|CAH87623.1| small GTPase Rab11, putative [Plasmodium chabaudi chabaudi]
Length = 202
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 121/192 (63%), Gaps = 52/192 (27%)
Query: 30 RFTRNEFNLESKSTIGVEFATRSIQV-DQKTIKAQIWDTAGQERYRAITSAYYRGAVGAL 88
RFTR+EFNLESKSTIGVEFAT+SIQ+ + K IKAQIWDTAGQERYRAITSAYYRGAVGAL
Sbjct: 16 RFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGAL 75
Query: 89 LVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHL 148
LVYDI K T+EN+E+WL+ELRD+AD NIVI+LVG S L
Sbjct: 76 LVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDL-------------------- 115
Query: 149 TYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALD 208
+HLR + ++A FA++ L+FIETSAL+
Sbjct: 116 -------------------------------KHLRVINDNDATQFAKKEKLAFIETSALE 144
Query: 209 STNVETAFQNIL 220
+TNVE AF +L
Sbjct: 145 ATNVELAFHQLL 156
>gi|429965625|gb|ELA47622.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 207
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 128/218 (58%), Gaps = 52/218 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+ YDYLFK+VLIGDSGVGK+NLLS+ TR EF+ E+K+TIGVEFATR+ ++D IKAQIW
Sbjct: 2 ESYDYLFKIVLIGDSGVGKTNLLSQLTRGEFSAETKATIGVEFATRTFKIDNLVIKAQIW 61
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVER-WLRELRDHADQNIVIMLVGP 124
DTAGQERYRAITSAYYRG +GAL+VYDI + T N + WL +L++++ + I IM+VG
Sbjct: 62 DTAGQERYRAITSAYYRGTLGALIVYDITRKSTLSNATKHWLTQLKEYSGEEIEIMMVG- 120
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL R
Sbjct: 121 --------------------------------------------------NKTDLEDERT 130
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
V A+ NNL+F+ETSALD +NVE AF ++ A
Sbjct: 131 VTVACGNDAAKSNNLNFLETSALDGSNVEKAFDELIKA 168
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 126/215 (58%), Gaps = 52/215 (24%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
E DY+FKVV++GDS VGK+ LL RFT++EF L+SKSTIGVEF TR++ + +K +KAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRA+TSAYYRGA+GA++VYDI + T+ENV RW+ ELR HAD + V+ L+G
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIG--- 134
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL-RHLRAV 185
NK+D+ R V
Sbjct: 135 ------------------------------------------------NKADMPAGRREV 146
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
ADEA FAE L F E SAL NV+ AF +L
Sbjct: 147 AADEAARFAEEQGLFFSEASALSGDNVDRAFLTLL 181
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 126/215 (58%), Gaps = 52/215 (24%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
E DY+FKVV++GDS VGK+ LL RFT++EF L+SKSTIGVEF TR++ + +K +KAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRA+TSAYYRGA+GA++VYDI + T+ENV RW+ ELR HAD + V+ L+G
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIG--- 134
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL-RHLRAV 185
NK+D+ R V
Sbjct: 135 ------------------------------------------------NKADMPAGRREV 146
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
ADEA FAE L F E SAL NV+ AF +L
Sbjct: 147 AADEAARFAEEQGLFFSEASALSGDNVDRAFLTLL 181
>gi|168048429|ref|XP_001776669.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671961|gb|EDQ58505.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 161
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 106/168 (63%), Gaps = 51/168 (30%)
Query: 54 QVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHA 113
QVD KTIKAQIWDTAGQERYRAITSA
Sbjct: 1 QVDGKTIKAQIWDTAGQERYRAITSA---------------------------------- 26
Query: 114 DQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 173
YYRGAVGALLVYDI KH+TYENVERWL+ELRDHAD NIVIMLV
Sbjct: 27 -----------------YYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLV 69
Query: 174 GNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
GNKSDL+HLR V D+A+ F+E+ LSFIETSAL+STNVE AFQ ILT
Sbjct: 70 GNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILT 117
>gi|19920111|gb|AAM08543.1|AC079935_15 Putative Ras-related protein Rab [Oryza sativa Japonica Group]
Length = 202
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 127/216 (58%), Gaps = 65/216 (30%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
++ DY+FKVVLIGDS VGKS +L+RF RNEF+++SK+TIGVEF TR++ +D K
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHK------- 57
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
YRA+TSAYYRGA+GALLVYDI K +++++ RWL ELR HAD+NIVIMLVG
Sbjct: 58 -------YRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVG-- 108
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NKSDL RAV
Sbjct: 109 -------------------------------------------------NKSDLEDERAV 119
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
++AK FAE+ NL F+ETSAL +TNVE AFQ +L+
Sbjct: 120 STEDAKEFAEKENLFFLETSALQATNVENAFQTVLS 155
>gi|148908271|gb|ABR17250.1| unknown [Picea sitchensis]
Length = 214
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 125/221 (56%), Gaps = 52/221 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R +E YDYLFKV+ GDS VGKSN++SR TRN F+ + K T+GVEF +IQ KT
Sbjct: 1 MGRRCNEDYDYLFKVMFTGDSSVGKSNIISRLTRNYFSHQCKPTVGVEFGIYTIQDKGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
I AQIWDT G ERY + T + YRG GA+LVYDI + T+ENV +WL+ELRDHA+ N VI
Sbjct: 61 IAAQIWDTCGLERYASFTKSCYRGVAGAVLVYDITRRRTFENVGKWLKELRDHANSNPVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
ML+G S DL
Sbjct: 121 MLIGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+HLR+V ++A+ FAE+ L F+ETSA STNV+ A Q IL
Sbjct: 130 QHLRSVSTEDAQKFAEKEGLLFMETSAFKSTNVDKALQIIL 170
>gi|238594944|ref|XP_002393625.1| hypothetical protein MPER_06611 [Moniliophthora perniciosa FA553]
gi|215461391|gb|EEB94555.1| hypothetical protein MPER_06611 [Moniliophthora perniciosa FA553]
Length = 166
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 116/190 (61%), Gaps = 54/190 (28%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DYLFKVVLIGD VGKSNL SRF RN FN S+STIGVE+ATRSI + +T+KAQIWD A
Sbjct: 8 DYLFKVVLIGDCDVGKSNLFSRFVRNTFNPASRSTIGVEYATRSINIG-RTVKAQIWDMA 66
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERW--LRELRDHADQNIVIMLVGPPS 126
G+E+++A+TSAYYRGAVGALLVYDIAKH TY NV RW L+ELRDHA NIV+MLVG
Sbjct: 67 GKEQHQAMTSAYYRGAVGALLVYDIAKHDTYVNVTRWLNLKELRDHAGSNIVVMLVG--- 123
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL LR VP
Sbjct: 124 ------------------------------------------------NKSDLNDLREVP 135
Query: 187 ADEAKTFAER 196
ADEAK FA +
Sbjct: 136 ADEAKAFAGK 145
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 128/219 (58%), Gaps = 53/219 (24%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
+E E DY+FKVV++GDS VGK+ LL+RFTR+EF L+SKSTIGVEF TR++ + +K +KAQ
Sbjct: 26 KEAEIDYVFKVVVVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTLTLHRKRVKAQ 85
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRA+TSA
Sbjct: 86 IWDTAGQERYRAVTSA-------------------------------------------- 101
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD-QNIVIMLVGNKSDL-RH 181
YYRGA+GA++VYD+ + T+E+V RW+ ELR HAD + V+ L+GNK+D+
Sbjct: 102 -------YYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSSTVVALIGNKADMPAG 154
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V ADEA AE L F E SAL NVE AF +L
Sbjct: 155 RREVAADEAARLAEEQGLFFSEASALTGDNVERAFLTLL 193
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 128/216 (59%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E E + ++K+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATR+I+ + KTI+AQI
Sbjct: 2 EGETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQI 61
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQE+YRAIT AYYRGA GA+ VYD++K +++ +ERW+ EL++ D +I IM+VG
Sbjct: 62 WDTAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGN 121
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ L++ R
Sbjct: 122 KADLKQE---------------------------------------------------RE 130
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V + FA++++ FIETSALD TNVE AF ++L
Sbjct: 131 VNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLL 166
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 128/216 (59%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E E + ++K+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATR+I+ + KTI+AQI
Sbjct: 2 EGETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQI 61
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQE+YRAIT AYYRGA GA+ VYD++K +++ +ERW+ EL++ D +I IM+VG
Sbjct: 62 WDTAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGN 121
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ L++ R
Sbjct: 122 KADLKQE---------------------------------------------------RE 130
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V + FA++++ FIETSALD TNVE AF ++L
Sbjct: 131 VNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLL 166
>gi|145476441|ref|XP_001424243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391306|emb|CAK56845.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 128/215 (59%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+YDY +K+V+IGDSGVGK+N++++FTR EF+ E+K+T+GVEFA + + +D K IKAQ+W
Sbjct: 5 DDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKAQLW 64
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAI S+YY+GA GAL+V+DI K T++NV+RW++E+++ I I+LVG
Sbjct: 65 DTAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMKEVQESTSNEISIILVGNK 124
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLR V
Sbjct: 125 SDLR---------------------------------------------------HLRQV 133
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+D + +A ++ ++F+ETSA D NV AF ++
Sbjct: 134 SSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLI 168
>gi|444728498|gb|ELW68955.1| Ras-related protein Rab-30 [Tupaia chinensis]
Length = 263
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 137/220 (62%), Gaps = 9/220 (4%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
++YD+LFK+VLIG++GVGK+ L+ RFT+ F +TIGV+F ++++++ + +K QIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV--- 122
DTAGQER+R+IT +YYR A +L YDI ++ + WLRE+ +A ++ +L+
Sbjct: 64 DTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLLQIW 123
Query: 123 ---GPP---SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 176
G S+ + YYR A +L YDI ++ + WLRE+ +A ++ +LVGNK
Sbjct: 124 DTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNK 183
Query: 177 SDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAF 216
DL R V A+ F+E ++ ++ETSA +S NVE F
Sbjct: 184 IDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLF 223
>gi|8671779|gb|AAF78385.1|AC069551_18 T10O22.18 [Arabidopsis thaliana]
Length = 356
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 133/246 (54%), Gaps = 81/246 (32%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++E DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R+++V KTIKAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 65 WDTAGQE------------------------------RYRAITSAYYRGAVGALLVYDIA 94
WDTAGQE R+RAITS+YYRGA+GALL+YDI
Sbjct: 67 WDTAGQERIVNFFNNLCVFTYLKYNTVLFFIFAWEEKRFRAITSSYYRGALGALLIYDIT 126
Query: 95 KHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVE 154
+ +T++N+E+WL ELR + V++LVG
Sbjct: 127 RRITFKNIEKWLSELRGFSSPETVVVLVG------------------------------- 155
Query: 155 RWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVET 214
NKSDL R V +E KT AE L F+ETSAL++ NVE
Sbjct: 156 --------------------NKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEE 195
Query: 215 AFQNIL 220
AF +++
Sbjct: 196 AFLSMI 201
>gi|262400949|gb|ACY66377.1| RAB11a member RAS oncogene family [Scylla paramamosain]
Length = 91
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/91 (95%), Positives = 90/91 (98%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI+VD KTI
Sbjct: 1 MGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVY 91
KAQIWDTAGQERYRAITSAYYRGAVGALLVY
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVY 91
>gi|357512579|ref|XP_003626578.1| Ras-related GTP-binding protein [Medicago truncatula]
gi|355501593|gb|AES82796.1| Ras-related GTP-binding protein [Medicago truncatula]
Length = 232
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 80/115 (69%), Positives = 99/115 (86%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVV+IGDS VGK+ +LSRF +NEF +SKSTIGVEF TR++ ++ K IKAQIWDTA
Sbjct: 38 DYVFKVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLIKAQIWDTA 97
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
GQERYRA+TSAYYRGA+GA+LVYDI K T+++V RW+ ELR HAD +IVIML+G
Sbjct: 98 GQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWIEELRSHADNSIVIMLIG 152
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 128/216 (59%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E E + ++K+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATR+I+ + KTI+AQI
Sbjct: 2 EGETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQI 61
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQE+YRAIT AYYRGA GA+ VYD++K +++ +ERW+ EL++ D +I IM+VG
Sbjct: 62 WDTAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGRDSDITIMIVGN 121
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ L++ R
Sbjct: 122 KADLKQE---------------------------------------------------RE 130
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V + FA++++ FIETSALD TNVE AF ++L
Sbjct: 131 VNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLL 166
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 128/216 (59%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E E + ++K+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATR+I+ + KTI+AQI
Sbjct: 2 EGETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQI 61
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQE+YRAIT AYYRGA GA+ VYD++K +++ +ERW+ EL++ D +I IM+VG
Sbjct: 62 WDTAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGN 121
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ L++ R
Sbjct: 122 KADLKQE---------------------------------------------------RE 130
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V + FA++++ FIETSAL+ TNVE AF ++L
Sbjct: 131 VNTSDGTEFAQKHSAFFIETSALEGTNVEKAFSDLL 166
>gi|440291835|gb|ELP85077.1| rab11, putative [Entamoeba invadens IP1]
Length = 211
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 124/215 (57%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
++YD L+K V++GDSG GK+ LL RFTRNEF+ E KSTIGVEF+++ IQ ++ QIW
Sbjct: 2 EDYDVLYKTVMMGDSGAGKTCLLMRFTRNEFDAEKKSTIGVEFSSKQIQYKDSAVRIQIW 61
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAIT AYYRG++GA++VYD+ K ++E ++RW EL ++ D+++V M++G
Sbjct: 62 DTAGQERYRAITGAYYRGSLGAVMVYDVTKKSSFEALDRWHNELIENGDKSVVKMVIG-- 119
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL +R V
Sbjct: 120 -------------------------------------------------NKCDLEQMREV 130
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+EA+ FA++ F ETSA+D TNVE AF ++
Sbjct: 131 TTEEAEEFAKKTGSYFFETSAMDGTNVEKAFMQMI 165
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 125/217 (57%), Gaps = 52/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKTIKAQ 63
+ YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ + + K KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNGKVAKAQ 63
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAITSAYYRGA GA++VYDIA ++ NV RWL EL ++ D N++I LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDANMIIALVG 123
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S L + +TYE+ ER
Sbjct: 124 NKSDLTHL--------------REVTYEDGER---------------------------- 141
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+A+ NNL F ETS L + N++T F +L
Sbjct: 142 ---------YAKSNNLIFFETSCLSNENIDTTFTELL 169
>gi|46193751|emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
Length = 203
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 120/202 (59%), Gaps = 51/202 (25%)
Query: 15 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYR 74
VL GDSGVGKSNLLSRF++NEF +S+ TIGVEFA R+I+V K +K QIWDTAGQER+R
Sbjct: 1 VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60
Query: 75 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRG 134
AITS+YYRGA+GALLVYDI + T++N+++WLRELR+ + +VI+LVG
Sbjct: 61 AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVG----------- 109
Query: 135 AVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFA 194
NK DL R V +EA+ A
Sbjct: 110 ----------------------------------------NKCDLHQSREVQEEEARHLA 129
Query: 195 ERNNLSFIETSALDSTNVETAF 216
E NL F+ETSA D+ NVE AF
Sbjct: 130 ELENLFFMETSAKDNLNVEEAF 151
>gi|145525673|ref|XP_001448653.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834495|emb|CAI44562.1| rab_A44 [Paramecium tetraurelia]
gi|124416208|emb|CAK81256.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 119/217 (54%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
EDE+ YLFK++LIGDSGVGK+NL +R EF +++ TIGVEF R+++ D +K QI
Sbjct: 3 EDEFSYLFKIILIGDSGVGKTNLFNRLQNKEFQYDTRPTIGVEFINRTVRQDGNLVKCQI 62
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQE++RAIT+AYYRGA G + YD+ K TYE+ RW+ E++ D +IVIMLVG
Sbjct: 63 WDTAGQEKFRAITNAYYRGAKGVFVCYDVTKQGTYESTLRWMSEIKQFGDHDIVIMLVG- 121
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL R
Sbjct: 122 --------------------------------------------------NKIDLAEQRI 131
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V DE F E+N + +IETSAL++ NVE AF ++T
Sbjct: 132 VRTDEVSQFCEQNKVGYIETSALNNINVEMAFNQMVT 168
>gi|297740535|emb|CBI30717.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 117/211 (55%), Gaps = 76/211 (36%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKV SKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 EDDYDYLFKV-------------------------SKSTIGVEFATRSLNVDGKVIKAQI 41
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+ML+G
Sbjct: 42 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGN 101
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 102 KSDLR---------------------------------------------------HLVA 110
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETA 215
V ++ K+FAER +L F+ETSAL++TN+ A
Sbjct: 111 VSTEDGKSFAERESLYFMETSALEATNLFPA 141
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 125/217 (57%), Gaps = 52/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DQKTIKAQ 63
E YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ + + K KAQ
Sbjct: 3 EQTYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKNGKIAKAQ 62
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRAITSAYYRGA GA++VYDIA ++ NV RWL EL ++ D N++I LVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDPNMIIALVG 122
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S L + +T+E+ ER+ R
Sbjct: 123 NKSDLTHL--------------REVTFEDGERYARS------------------------ 144
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
NNL F ETS L++ N++T F +L
Sbjct: 145 -------------NNLLFFETSCLNNENIDTTFGELL 168
>gi|60417390|emb|CAI59822.1| GTP-binding protein YPT1 [Nyctotherus ovalis]
Length = 172
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 129/219 (58%), Gaps = 51/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G ++ DYL K++L+GD VGK+NL++R+T F++ESK T+GVEF+T ++ D K ++
Sbjct: 5 GGSSEQCDYLLKIILVGDVAVGKTNLITRYTSKAFSIESKPTLGVEFSTATLYKDSKVVR 64
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
QIWDT+GQE Y+++T +Y++GA GA++VYDI KH T+ENV WLR++ + +D N V+M+
Sbjct: 65 IQIWDTSGQEIYKSMTKSYFKGAHGAIIVYDITKHKTFENVSLWLRDVNEASDMNPVVMI 124
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NK DL +
Sbjct: 125 VG---------------------------------------------------NKCDLNN 133
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
LR V +EA FA+ N++ FIETSALD T+V+ AF+NI+
Sbjct: 134 LREVAQEEAIQFAKENSVGFIETSALDMTHVDVAFENII 172
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 130/217 (59%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ DYLFK VLIGDSGVGKSNL+SRF ++EF L+SK TIGVEFA R+I+V K IKAQI
Sbjct: 7 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+RAITS+YYRGA+G +LVYDI + T+ NV +WL ELR+ ++++V++LV
Sbjct: 67 WDTAGQERFRAITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMVVVLV-- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NKSDL R
Sbjct: 125 -------------------------------------------------ANKSDLVQSRE 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +E + FAE L F+ETSAL + NVE AF ++T
Sbjct: 136 VEKEEGEEFAEIEGLCFMETSALQNLNVEEAFLEMIT 172
>gi|413934936|gb|AFW69487.1| hypothetical protein ZEAMMB73_585575 [Zea mays]
Length = 224
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 102/124 (82%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
E DY+FK+V++GDS VGK+ LL RFTR+EF L+SKSTIG+EF TR++ + + +KAQIWD
Sbjct: 2 EEDYVFKIVVVGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWD 61
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRA+TSAYYRGA+GA+LVYD+ T+++ RW+ ELR HAD++IV+MLVG +
Sbjct: 62 TAGQERYRAVTSAYYRGALGAMLVYDVTSRRTFDHATRWVAELRAHADKSIVVMLVGNKA 121
Query: 127 LLRR 130
L R
Sbjct: 122 DLAR 125
>gi|115469954|ref|NP_001058576.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|53791772|dbj|BAD53566.1| putative PRA2 [Oryza sativa Japonica Group]
gi|113596616|dbj|BAF20490.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|125556744|gb|EAZ02350.1| hypothetical protein OsI_24454 [Oryza sativa Indica Group]
gi|125598494|gb|EAZ38274.1| hypothetical protein OsJ_22652 [Oryza sativa Japonica Group]
Length = 225
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 128/215 (59%), Gaps = 51/215 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+E DY+FKVV+IGDS VGK+ LL RFT++EF ++SKSTIG+EF TR++++ K +KAQIW
Sbjct: 2 EEEDYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIW 61
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRA+TSAYYRGA+GA+LVYD+ ++ + RWL +LR HAD +IV+ML+G
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNSIVVMLIG-- 119
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK+DL H RAV
Sbjct: 120 -------------------------------------------------NKADLSHARAV 130
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
ADEA FAE L F E SAL NVE AF +L
Sbjct: 131 AADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLL 165
>gi|74833680|emb|CAI39320.1| rab_C09 [Paramecium tetraurelia]
Length = 212
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 52/217 (23%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D+YDY +K+V+IGDSGVGK+N++++FTR EF+ E+K+T+GVEFA + + +D K IKAQ+W
Sbjct: 5 DDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKAQLW 64
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQERYRAI S+YY+GA GAL+V+DI K T++NV+RW++ +++ I I+LVG
Sbjct: 65 DTAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMK-VQESTSNEISIILVGNK 123
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
S LR HLR V
Sbjct: 124 SDLR---------------------------------------------------HLRQV 132
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+D + +A ++ ++F+ETSA D NV AF ++
Sbjct: 133 SSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLING 169
>gi|290986392|ref|XP_002675908.1| rab family small GTPase [Naegleria gruberi]
gi|284089507|gb|EFC43164.1| rab family small GTPase [Naegleria gruberi]
Length = 189
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 120/212 (56%), Gaps = 51/212 (24%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+ D+L+KVV++GDSGVGKSNL+ RFT+N FN + K TIGVEFA++SI D TIK QIWD
Sbjct: 3 DCDFLYKVVVLGDSGVGKSNLIIRFTKNIFNTQPKPTIGVEFASKSISYDGATIKGQIWD 62
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQER+ A++ Y+RGA GAL+VYDI ++E++E+W E+ ++ + +++G
Sbjct: 63 TAGQERFHAVSVQYHRGAHGALMVYDITNKESFEHLEKWFNEISKQGEEGCIYIVIG--- 119
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NK DL R V
Sbjct: 120 ------------------------------------------------NKCDLAGQRQVT 131
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQN 218
+E K FAE+ NL F+ETSALDSTNVE AF N
Sbjct: 132 EEEGKIFAEKRNLLFMETSALDSTNVEEAFSN 163
>gi|349802663|gb|AEQ16804.1| hypothetical protein [Pipa carvalhoi]
Length = 123
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/88 (94%), Positives = 85/88 (96%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGAL 88
KAQIWDTAGQERYRA TSAYYRGAVG +
Sbjct: 61 KAQIWDTAGQERYRASTSAYYRGAVGQM 88
>gi|260816116|ref|XP_002602818.1| hypothetical protein BRAFLDRAFT_253136 [Branchiostoma floridae]
gi|229288130|gb|EEN58830.1| hypothetical protein BRAFLDRAFT_253136 [Branchiostoma floridae]
Length = 188
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 129/217 (59%), Gaps = 53/217 (24%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
E D+ FK+V++GDSGVGKSNLLSRF + ++ SK TIG+EFAT++++++ KTIKAQIWD
Sbjct: 1 EPDHTFKIVIVGDSGVGKSNLLSRFAFSRYDSGSKPTIGIEFATKTMKIEGKTIKAQIWD 60
Query: 67 TAGQERYRAITS-AYYRGAVGALLVYDIAKHLTYENVERWLRELRDHA-DQNIVIMLVGP 124
TAG +RYR +T A RGAVGA LVYDI +H T+E+ + L+EL++ A DQ IV+MLVG
Sbjct: 61 TAGDDRYRLVTQLACCRGAVGAFLVYDITRHGTFEHAQNRLKELQEDADDQGIVVMLVG- 119
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL H+R
Sbjct: 120 --------------------------------------------------NKCDLSHIRT 129
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP EA+ FA++++L F ETSA D NV+ AF+ ++T
Sbjct: 130 VPIREARDFAKQSSLHFFETSAADVKNVDDAFERLMT 166
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 52/212 (24%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFK+VL+GD GVGK+ + +R+T +EFN +SKSTIGVEFA +++ ++ IK QIWDT
Sbjct: 3 YDYLFKIVLVGDCGVGKTQIRNRYTLDEFNPQSKSTIGVEFAFKTVNINGNDIKGQIWDT 62
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
+G+ERYRAITSAYYRG+VGA+LV+D+ K ++E++E W +LR +AD+NIV+ +VG
Sbjct: 63 SGEERYRAITSAYYRGSVGAILVFDVTKPKSFESLENWASQLRQYADENIVVCVVG---- 118
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
NK DL R V
Sbjct: 119 -----------------------------------------------NKIDL-PTREVST 130
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNI 219
EA+ FA N ++ETSALD T VE AF+ +
Sbjct: 131 VEAERFARGNGFFYMETSALDGTGVENAFRQV 162
>gi|340508405|gb|EGR34115.1| Ras-related protein Rab11c, putative [Ichthyophthirius multifiliis]
Length = 303
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 51/215 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YD+LFK+VL+GD VGKSN+LSRFTR +F +++ STIGVEFA R I + K I+ QIWDT
Sbjct: 10 YDFLFKIVLVGDIAVGKSNILSRFTREDFQIDNTSTIGVEFANRVITAEDKIIQLQIWDT 69
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQE ++A+T Y+RGA+GA+L+YDI+K T+++ E+WL+ ++D+ +++ I+LVG
Sbjct: 70 AGQETFKAVTQQYFRGAIGAMLIYDISKKSTFQSCEQWLQMIKDYGEKHTQILLVG---- 125
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
NK DL +LRAV
Sbjct: 126 -----------------------------------------------NKCDLINLRAVSL 138
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+EA FA+ + +IE SAL+ N++TAF +++
Sbjct: 139 NEACDFAQACGIQYIEVSALEDVNIDTAFTQLVSG 173
>gi|440297845|gb|ELP90486.1| rab11, putative [Entamoeba invadens IP1]
Length = 222
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 119/211 (56%), Gaps = 51/211 (24%)
Query: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
+ +VV+IG+SGVGKSNLL RFTRNE+ E K TIGVEFATR+I+ D KTI+AQIWDTAG
Sbjct: 21 FSLEVVIIGESGVGKSNLLLRFTRNEYEPEKKFTIGVEFATRTIEYDGKTIRAQIWDTAG 80
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLR 129
QE+YRAIT AYYRGA GA+ VYD++K T+ ++RW+ EL+ ++VIM+VG S
Sbjct: 81 QEKYRAITDAYYRGAEGAVCVYDVSKKDTFTAIDRWMTELKAGCGDDVVIMIVGNKS--- 137
Query: 130 RYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADE 189
DL R V E
Sbjct: 138 ------------------------------------------------DLEQERDVKPSE 149
Query: 190 AKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ FA+R+N F+ETSAL NVE AF +L
Sbjct: 150 GEEFAQRHNSFFMETSALTGNNVEKAFTELL 180
>gi|326488455|dbj|BAJ93896.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 75/118 (63%), Positives = 100/118 (84%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+E DY+FKVV+IGDSGVGK+ LL RFTR +F L+SKSTIG+EF TR++ + ++ +KAQIW
Sbjct: 2 EEPDYVFKVVVIGDSGVGKTQLLGRFTRGDFCLDSKSTIGIEFQTRTVDIARRRVKAQIW 61
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
DTAGQERYRA+TSAYYRGA+GA+LVYD+ + ++ + RW+ ELR HAD++IV+ LVG
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTRRDSFGHAARWVAELRAHADKSIVVALVG 119
>gi|378755008|gb|EHY65036.1| GTP-binding protein ypt3 [Nematocida sp. 1 ERTm2]
Length = 210
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 123/221 (55%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M E EY+YL+K+VLIGDSGVGK+NLL R N FN +KSTIGVEF T+ V+ K I
Sbjct: 5 MRREEQEYEYLYKIVLIGDSGVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKI 64
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVE-RWLRELRDHADQNIVI 119
KAQIWDTAGQERYRAITSAYYRGAVGA++VYDI++ T++N W+++L+D+++ +VI
Sbjct: 65 KAQIWDTAGQERYRAITSAYYRGAVGAIVVYDISRKETFDNARTEWIKQLKDNSESGLVI 124
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
LVG NK+DL
Sbjct: 125 SLVG---------------------------------------------------NKTDL 133
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V EA+ A+ ETSAL NV+ AF+ ++
Sbjct: 134 NEKRQVSLQEAREAAQIGGYQLTETSALSDVNVQEAFETLI 174
>gi|47206662|emb|CAF91657.1| unnamed protein product [Tetraodon nigroviridis]
Length = 109
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 98/107 (91%), Gaps = 1/107 (0%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG+ E Y+++FKVVLIG+SGVGKSNLLSRFT+NEFN +S++TIGVEF+TR++++ TI
Sbjct: 1 MGSDE-AYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVELSGFTI 59
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLR 107
KAQIWDTAG ERYRAITSAYYRGAVGALLVYDI KHLTY++VERWL+
Sbjct: 60 KAQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYDSVERWLK 106
>gi|159117346|ref|XP_001708893.1| Rab11 [Giardia lamblia ATCC 50803]
gi|28628539|gb|AAO49245.1|AF460175_1 GTPase Rab11-like protein [Giardia intestinalis]
gi|157437007|gb|EDO81219.1| Rab11 [Giardia lamblia ATCC 50803]
Length = 216
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 124/220 (56%), Gaps = 53/220 (24%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK----TIK 61
D YD+L+K++LIGDS VGKSN+LSRFT N+FN S +TIGVEF T+++ V+ + + +
Sbjct: 3 DAYDHLYKLILIGDSAVGKSNILSRFTSNKFNASSAATIGVEFTTKTLTVEVQGKMISTR 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Q WDTAGQERYR+ITS+YYRGA G LLV+D+ K ++E+ WL ELR+ + + +
Sbjct: 63 LQCWDTAGQERYRSITSSYYRGAHGCLLVFDVTKRTSFEHCTEWLTELRNASANSTACKV 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+ LVGNK DLRH
Sbjct: 123 I-------------------------------------------------LVGNKVDLRH 133
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LR V +EA FA++ LS+IETSA ++ AF+ ++T
Sbjct: 134 LREVTTEEATAFAQQQGLSYIETSASSGHGIDDAFKQLVT 173
>gi|253742611|gb|EES99410.1| Rab11 [Giardia intestinalis ATCC 50581]
Length = 216
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 124/220 (56%), Gaps = 53/220 (24%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK----TIK 61
D YD+L+K++LIGDS VGKSN+LSRFT N+FN S +TIGVEF T+++ V+ + + +
Sbjct: 3 DAYDHLYKLILIGDSAVGKSNILSRFTSNKFNASSAATIGVEFTTKTLTVEVQGKMISTR 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Q WDTAGQERYR+ITS+YYRGA G LLV+D+ K ++E+ WL ELR+ + + +
Sbjct: 63 LQCWDTAGQERYRSITSSYYRGAHGCLLVFDVTKRTSFEHCTEWLTELRNASANSTACKV 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+ LVGNK DLRH
Sbjct: 123 I-------------------------------------------------LVGNKVDLRH 133
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LR V +EA FA++ LS+IETSA ++ AF+ ++T
Sbjct: 134 LREVTTEEATAFAQQQGLSYIETSASSGHGIDDAFKRLVT 173
>gi|118401353|ref|XP_001032997.1| Ras family protein [Tetrahymena thermophila]
gi|89287343|gb|EAR85334.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777820|dbj|BAJ21306.1| Rab-family small GTPase Rab11I [Tetrahymena thermophila]
Length = 225
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 132/217 (60%), Gaps = 52/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E + DY FK++LIGDSGVGK+++++RFT N+FN+E KSTIGVE++ +++ +DQ I+A I
Sbjct: 10 EVQLDYQFKILLIGDSGVGKTSIMNRFTENKFNVEIKSTIGVEYSKKTMVIDQAVIQASI 69
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVER-WLRELRDHADQNIVIMLVG 123
WDTAGQER+R++ YY+GA+GALLV+D+ + T EN+++ WL+E+ HA +NI ++L+G
Sbjct: 70 WDTAGQERFRSLAKNYYKGAIGALLVFDVTRPHTLENIQKIWLQEVEQHASKNIKMILIG 129
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
NKSDL R
Sbjct: 130 ---------------------------------------------------NKSDLTVER 138
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V +EA F++ NNL+++ETSAL++ N++ AF+ ++
Sbjct: 139 IVKQEEAVNFSKTNNLAYMETSALNNQNIDQAFETLV 175
>gi|146079278|ref|XP_001463744.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|398011473|ref|XP_003858932.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
gi|134067831|emb|CAM66111.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|322497143|emb|CBZ32214.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
Length = 208
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 117/212 (55%), Gaps = 51/212 (24%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+E + FK+VLIGDSGVGKSNL++R+T NEFN E+ STIGVEF T+S+++ + K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIQSRDAKIQIW 61
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQER+RAI+ + Y GA GA+LVYDI +++++ WL+ELR I L+G
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIG-- 119
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL HLR V
Sbjct: 120 -------------------------------------------------NKCDLEHLRVV 130
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQ 217
+ A FA N LSF+ETSAL+ TNV+ AF+
Sbjct: 131 KKEAADRFARENGLSFLETSALERTNVDKAFE 162
>gi|157865435|ref|XP_001681425.1| putative small GTP-binding protein Rab11 [Leishmania major strain
Friedlin]
gi|68124721|emb|CAJ02862.1| putative small GTP-binding protein Rab11 [Leishmania major strain
Friedlin]
Length = 208
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 118/212 (55%), Gaps = 51/212 (24%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+E + FK+VLIGDSGVGKSNL++R+T NEFN E+ STIGVEF T+S++++ + K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIESRDAKIQIW 61
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQER+RAI+ + Y GA GA+LVYDI +++++ WL+ELR I L+G
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIG-- 119
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL HLR V
Sbjct: 120 -------------------------------------------------NKCDLEHLRVV 130
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQ 217
+ A FA N LSF+ETSAL+ TNV+ AF+
Sbjct: 131 KKEVADRFARENGLSFLETSALERTNVDKAFE 162
>gi|401416870|ref|XP_003872929.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322489155|emb|CBZ24407.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 208
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 117/212 (55%), Gaps = 51/212 (24%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+E + FK+VLIGDSGVGKSNL++R+T NEFN E+ STIGVEF T+S+++ + K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIQSRDAKIQIW 61
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQER+RAI+ + Y GA GA+LVYDI +++++ WL+ELR I L+G
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIG-- 119
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
NK DL HLR V
Sbjct: 120 -------------------------------------------------NKCDLEHLRVV 130
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQ 217
+ A FA N LSF+ETSAL+ TNV+ AF+
Sbjct: 131 KKEVADRFARENGLSFLETSALEKTNVDKAFE 162
>gi|149391443|gb|ABR25739.1| ras-related protein rab11b [Oryza sativa Indica Group]
Length = 165
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 103/170 (60%), Gaps = 51/170 (30%)
Query: 52 SIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRD 111
SI VD K +KAQIWDTAGQERYRAITSA
Sbjct: 1 SIHVDDKVVKAQIWDTAGQERYRAITSA-------------------------------- 28
Query: 112 HADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 171
YYRGAVGAL+VYD+ +H+T+ENVERW+REL+DH D NIVIM
Sbjct: 29 -------------------YYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIM 69
Query: 172 LVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LVGNK+DLRHLRAV ++AK FAE+ N F+ETSAL+S NVE AF +LT
Sbjct: 70 LVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLT 119
>gi|308159460|gb|EFO61990.1| Rab11 [Giardia lamblia P15]
Length = 216
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 123/219 (56%), Gaps = 53/219 (24%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK----TIK 61
D YD+L+K++LIGDS VGKSN+LSRFT N+FN S +TIGVEF T+++ V+ + + +
Sbjct: 3 DAYDHLYKLILIGDSAVGKSNILSRFTSNKFNASSAATIGVEFTTKTLTVEVQGKMISTR 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
Q WDTAGQERYR+ITS+YYRGA G LLV+D+ K ++E+ WL ELR+ + + +
Sbjct: 63 LQCWDTAGQERYRSITSSYYRGAHGCLLVFDVTKRTSFEHCTEWLTELRNASANSTACKV 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+ LVGNK DLRH
Sbjct: 123 I-------------------------------------------------LVGNKVDLRH 133
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
LR V +EA FA++ LS+IETSA ++ AF+ ++
Sbjct: 134 LREVTTEEAAAFAQQQGLSYIETSASSGHGIDDAFKQLV 172
>gi|297740452|emb|CBI30634.3| unnamed protein product [Vitis vinifera]
Length = 131
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/125 (67%), Positives = 95/125 (76%), Gaps = 22/125 (17%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFK F+LESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 7 DDDYDYLFK----------------------FSLESKSTIGVEFATRSIRVDDKVVKAQI 44
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 45 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 104
Query: 125 PSLLR 129
+ LR
Sbjct: 105 KADLR 109
>gi|125546393|gb|EAY92532.1| hypothetical protein OsI_14270 [Oryza sativa Indica Group]
Length = 168
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 104/168 (61%), Gaps = 51/168 (30%)
Query: 54 QVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHA 113
QV+ KT+KAQIWDTAGQERYRAITSA
Sbjct: 6 QVEGKTVKAQIWDTAGQERYRAITSA---------------------------------- 31
Query: 114 DQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 173
YYRGAVGALLVYD+ K T+ENV+RWL+ELRDHAD NIV+ML+
Sbjct: 32 -----------------YYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLI 74
Query: 174 GNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
GNK DL+HLR+V ++A +FAER LSF+ETSALD+TNV+ AFQ +LT
Sbjct: 75 GNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLT 122
>gi|145492543|ref|XP_001432269.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834368|emb|CAI44526.1| rab_B44 [Paramecium tetraurelia]
gi|124399379|emb|CAK64872.1| unnamed protein product [Paramecium tetraurelia]
Length = 212
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 119/218 (54%), Gaps = 53/218 (24%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
DE+ YLFK++LIGDSGVGK+NL +R +F +++ TIGVEF R+++ D IK QIW
Sbjct: 5 DEFSYLFKIILIGDSGVGKTNLFNRLQYKDFQYDTRPTIGVEFLNRTVREDGNLIKCQIW 64
Query: 66 DT--AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
DT AGQE++RAITSAYYRGA G + YD+ K T+E+ RW+ E++ + D NIVIMLVG
Sbjct: 65 DTVKAGQEKFRAITSAYYRGAKGVFVCYDVTKQGTFESTLRWMSEIKQYGDSNIVIMLVG 124
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
NK DL R
Sbjct: 125 ---------------------------------------------------NKIDLADQR 133
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V DE F ++N + ++ETSAL++ NVE AF ++T
Sbjct: 134 IVRTDEVSQFCDQNKVGYVETSALNNVNVELAFNQMVT 171
>gi|384501465|gb|EIE91956.1| hypothetical protein RO3G_16667 [Rhizopus delemar RA 99-880]
Length = 187
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 124/218 (56%), Gaps = 52/218 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYL+K+VL GDSGVGKSN++SRF RNEF+L + T GV+F T+++ D +KAQ+
Sbjct: 2 DDEYDYLYKLVLTGDSGVGKSNVVSRFARNEFDLVYRKTYGVDFTTKTLGTDNHIVKAQL 61
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
DTAG+ER+R I +A+YR A GA +VYDI ++ENV WLR++R++AD N VIMLVG
Sbjct: 62 CDTAGEERFRVIITAFYRNAAGAFIVYDITSRSSFENVHIWLRKIREYADPNAVIMLVG- 120
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL-RHLR 183
NK DL + R
Sbjct: 121 --------------------------------------------------NKVDLSKSSR 130
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +E + AE L FIETSALD+TN++ AF +++
Sbjct: 131 EVETEEGRLLAEEEGLLFIETSALDATNIDAAFTILIS 168
>gi|145533477|ref|XP_001452483.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420182|emb|CAK85086.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 123/216 (56%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E++YD L K++++GDSGVGK+NL++RF + +F +SK T+GVEF R I + KTIKAQ+
Sbjct: 4 EEDYDILMKIIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFFRHIDIMGKTIKAQV 63
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQE++RAIT YYRGA+GA++ YDI K ++ NVERW+ ELR+H D N+V+ML+G
Sbjct: 64 WDTAGQEKFRAITYGYYRGALGAMICYDITKEQSFLNVERWIEELREHGDSNLVMMLIGT 123
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL R
Sbjct: 124 KS---------------------------------------------------DLESKRV 132
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++ A ++N++F+ETSAL + NV AF +L
Sbjct: 133 VRNEDGTQKALQHNMAFLETSALKAANVGKAFSMLL 168
>gi|74831376|emb|CAI39292.1| rab_C68 [Paramecium tetraurelia]
Length = 174
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 124/218 (56%), Gaps = 51/218 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E++YD L K++++GDSGVGK+NL++RF + +F +SK T+GVEF R I + KTIKAQ+
Sbjct: 4 EEDYDILMKIIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFFRHIDIMGKTIKAQV 63
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQE++RAIT YYRGA+GA++ YDI K ++ NVERW+ ELR+H D N+V+ML+G
Sbjct: 64 WDTAGQEKFRAITYGYYRGALGAMICYDITKEQSFLNVERWIEELREHGDSNLVMMLIGT 123
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL R
Sbjct: 124 KS---------------------------------------------------DLESKRV 132
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
V ++ A ++N++F+ETSAL + NV AF +L +
Sbjct: 133 VRNEDGTQKALQHNMAFLETSALKAANVGKAFSMLLES 170
>gi|118379577|ref|XP_001022954.1| Ras family protein [Tetrahymena thermophila]
gi|89304721|gb|EAS02709.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 1307
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 90/205 (43%), Positives = 121/205 (59%), Gaps = 51/205 (24%)
Query: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYRA 75
L DSGVGKS L+SRFT+++F++E + TIGVEF+T++I++ K IKAQIWDTAGQERYRA
Sbjct: 1104 LACDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTAGQERYRA 1163
Query: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGA 135
ITSAYYRGA GAL+V+DI K ++EN+ +W +EL++H+D IV ML+G
Sbjct: 1164 ITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIG------------ 1211
Query: 136 VGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTFAE 195
NK DL R + D A FA+
Sbjct: 1212 ---------------------------------------NKCDLADQRNISKDAASKFAQ 1232
Query: 196 RNNLSFIETSALDSTNVETAFQNIL 220
+++++ETSAL STNVE AF I+
Sbjct: 1233 EYDMAYLETSALHSTNVEQAFHQII 1257
>gi|1370158|emb|CAA98185.1| RAB11I [Lotus japonicus]
Length = 163
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 105/172 (61%), Gaps = 51/172 (29%)
Query: 50 TRSIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLREL 109
TRS+++ KT+KAQIWDTAGQERYRAITSA
Sbjct: 1 TRSVRIHDKTVKAQIWDTAGQERYRAITSA------------------------------ 30
Query: 110 RDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 169
YYRGAVGAL+VYD+ + +T+ENV+RWL+ELRDH D NIV
Sbjct: 31 ---------------------YYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDANIV 69
Query: 170 IMLVGNKSDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
IMLVGNK+DLRHLRAVP +EA FAER N F+ETSAL+S NV+ AF +L+
Sbjct: 70 IMLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLS 121
>gi|281205133|gb|EFA79326.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 253
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 126/218 (57%), Gaps = 19/218 (8%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
Y +LFK ++IGD+GVGKS LL +FT F TIGVEF R I +D K IK QIWDT
Sbjct: 2 YAFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNKPIKLQIWDT 61
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQE +R+IT +YYRG+ GALLVYDI + T+ ++ WL + + QN + L P +
Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITRRETFNHLTCWLSKYKRK--QNNTLQLAPPQNH 119
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLR-------ELRDHADQNIVIMLVGNKSDLR 180
V HLT+ + + +R + R A+ N+ I+L+GNKSDL
Sbjct: 120 DN----------CVPHSNLHLTWISAQCQMRFWADDVDDARAFANSNMTIILIGNKSDLE 169
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQN 218
RAV +E FAE N L F+ETSA + NVE AF N
Sbjct: 170 QKRAVSYEEGAKFAEENGLIFLETSAKTAANVEEAFIN 207
>gi|357514495|ref|XP_003627536.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355521558|gb|AET02012.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 216
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 118/216 (54%), Gaps = 67/216 (31%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E++ DY+FKVV+IGDS VGK+ +LSRF++NE ++ ++ K IKAQI
Sbjct: 20 EEKIDYVFKVVVIGDSAVGKTQILSRFSKNE----------------TVTINGKVIKAQI 63
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRA+TSAYYRGA+GA+LVYDI K ++++V +W+ ELR HAD +IVIMLVG
Sbjct: 64 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIMLVG- 122
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK DL LR
Sbjct: 123 --------------------------------------------------NKGDLVDLRM 132
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP ++A FAE L F ETSAL NVE AF +L
Sbjct: 133 VPTEDAVEFAEDQGLFFSETSALTGVNVEGAFMKLL 168
>gi|215259571|gb|ACJ64277.1| conserved hypothetical protein [Culex tarsalis]
Length = 143
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/91 (90%), Positives = 82/91 (90%)
Query: 131 YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEA 190
YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQ VGNKSDLRHLRAVP DEA
Sbjct: 8 YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQKHRDHAVGNKSDLRHLRAVPTDEA 67
Query: 191 KTFAERNNLSFIETSALDSTNVETAFQNILT 221
K FAERN LSFIETSALDSTNVETAFQNILT
Sbjct: 68 KGFAERNGLSFIETSALDSTNVETAFQNILT 98
>gi|387592730|gb|EIJ87754.1| GTPase Ypt3 [Nematocida parisii ERTm3]
gi|387595356|gb|EIJ92980.1| GTPase Ypt3 [Nematocida parisii ERTm1]
Length = 206
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 122/221 (55%), Gaps = 52/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
M E EY+YL+K+VLIGDS VGK+NLL R N FN +KSTIGVEF T+ V+ K I
Sbjct: 1 MRREEQEYEYLYKIVLIGDSSVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVE-RWLRELRDHADQNIVI 119
KAQIWDTAGQERYRAITSAYYRGAVGA++VYDI + +++N W+++L+D+++ +VI
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGAIVVYDITRKESFDNARTEWIKQLKDNSESGLVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
LVG NK+DL
Sbjct: 121 SLVG---------------------------------------------------NKTDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R V EA+ A+ + ETSAL NV+ AF+ ++
Sbjct: 130 EEKRQVSQQEAREAAQIGDYLLTETSALSDVNVQEAFEALI 170
>gi|429327079|gb|AFZ78868.1| Rab GTPase-like protein [Coptotermes formosanus]
Length = 212
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 123/212 (58%), Gaps = 51/212 (24%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E E+DY+FK+V++GDSGVG++NLL +F + F +S+STIGVEF ++++V+ K++K QI
Sbjct: 3 EAEFDYIFKIVIVGDSGVGRTNLLLQFVQGVFIPQSRSTIGVEFRVKTVEVNGKSVKIQI 62
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAIT
Sbjct: 63 WDTAGQERYRAIT----------------------------------------------- 75
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ YYRGAV ALL+YDI +Y ++++W+ EL+ HAD N+++ML+GNK DL R
Sbjct: 76 ----KNYYRGAVVALLLYDITSSSSYNSLQKWIDELKMHADGNVIVMLIGNKCDLSGQRT 131
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAF 216
V +A+ A N+ F ETSA ++TNV+ AF
Sbjct: 132 VLEADAQNLANDNSFLFFETSAKEATNVKEAF 163
>gi|440790656|gb|ELR11936.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 123/224 (54%), Gaps = 60/224 (26%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--------- 56
D DYL K+V++GDSGVGKSN++SRFT + F SK+TIGV FAT+++ V+
Sbjct: 7 DTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAVETSNDSTKDC 66
Query: 57 QKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQN 116
+K +K Q+WDTAGQERYRA++SAYYRGA GAL+VYDI + +++ +WL E+ + Q+
Sbjct: 67 KKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEIDKYCTQD 126
Query: 117 IVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 176
+V+ LVG NK
Sbjct: 127 VVVTLVG---------------------------------------------------NK 135
Query: 177 SDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
DL R V +E K A R N+ FIETSA D+TN+E AF +++
Sbjct: 136 LDLSENRCVSVEEGKKVAARENMFFIETSAKDATNIEKAFTHLI 179
>gi|215767735|dbj|BAG99963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 102
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/96 (84%), Positives = 89/96 (92%), Gaps = 1/96 (1%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F+L+SKSTIGVEFAT+S+Q++ KT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAK 95
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK 96
>gi|440800473|gb|ELR21511.1| Rab GTPase, putative [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 123/224 (54%), Gaps = 60/224 (26%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--------- 56
D DYL K+V++GDSGVGKSN++SRFT + F SK+TIGV FAT+++ V+
Sbjct: 7 DTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAVETSNDSTKDC 66
Query: 57 QKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQN 116
+K +K Q+WDTAGQERYRA++SAYYRGA GAL+VYDI + +++ +WL E+ + Q+
Sbjct: 67 KKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEIDKYCTQD 126
Query: 117 IVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 176
+V+ LVG NK
Sbjct: 127 VVVTLVG---------------------------------------------------NK 135
Query: 177 SDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
DL R V +E K A R N+ FIETSA D+TN+E AF +++
Sbjct: 136 LDLSENRCVSVEEGKKVAARENMFFIETSAKDATNIEKAFTHLI 179
>gi|356531156|ref|XP_003534144.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA6a-like
[Glycine max]
Length = 218
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 125/218 (57%), Gaps = 53/218 (24%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQ-VDQKTIKAQ 63
++ DYLFKV IG+SGVGKSNL+SRF ++EF L+SK +IGVEFA +I+ V K IKAQ
Sbjct: 8 DEHCDYLFKVX-IGESGVGKSNLISRFAKDEFRLDSKPSIGVEFAYGNIKLVRDKLIKAQ 66
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQER+RAITS+YYRGA+GA+LVYDI K T+ NV +WL ELR+ +++V++LV
Sbjct: 67 IWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVR 126
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
S DL R
Sbjct: 127 NKS---------------------------------------------------DLDQSR 135
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K FAE L F+ETSAL + NV+ AF ++T
Sbjct: 136 QVEREKGKGFAETEGLCFMETSALQNLNVDEAFXEMIT 173
>gi|402466644|gb|EJW02094.1| small GTP-binding protein domain protein [Edhazardia aedis USNM
41457]
Length = 207
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 119/216 (55%), Gaps = 52/216 (24%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
D YD+L+K+VLIGDSGVGK+N+L R ++N F ++K TIGVEF ++ ++ + +KAQIW
Sbjct: 2 DRYDFLYKIVLIGDSGVGKTNILLRLSQNVFFSDTKPTIGVEFDAKTFKLSEAVVKAQIW 61
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYEN-VERWLRELRDHADQNIVIMLVGP 124
DTAGQERYRAITSAYYRG GALLVYD+ K T +N ++ WL +L++H D +VI LVG
Sbjct: 62 DTAGQERYRAITSAYYRGTRGALLVYDVCKAFTLDNCMQYWLLQLKEHGDPRMVIALVG- 120
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+D R
Sbjct: 121 --------------------------------------------------NKTDQEMYRE 130
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V + K AERN + F ETSA NVE AF+ ++
Sbjct: 131 VSYERGKEIAERNKMLFFETSAKTGVNVENAFKLLM 166
>gi|145540567|ref|XP_001455973.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834247|emb|CAI44494.1| rab_C46 [Paramecium tetraurelia]
gi|124423782|emb|CAK88576.1| unnamed protein product [Paramecium tetraurelia]
Length = 227
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 122/211 (57%), Gaps = 52/211 (24%)
Query: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
++FK++L+G + VGKS +L RFT+++FNL S +TIGVEF+ + +++D K I+ Q+WDTAG
Sbjct: 12 HVFKIILLGSTAVGKSQILLRFTKDQFNLSSNTTIGVEFSAKVLEIDNKKIRVQVWDTAG 71
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD-QNIVIMLVGPPSLL 128
QE+YRAI AYY+GAVGA LVYDI K ++ V+RWL+E+RD++D QN+V+ML+G
Sbjct: 72 QEKYRAIAKAYYKGAVGAFLVYDITKKNSFLEVDRWLQEIRDYSDQQNLVLMLIG----- 126
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK+DL R V +
Sbjct: 127 ----------------------------------------------NKNDLEAQRQVSKE 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNI 219
EA +A+ + F+ETSA N+E AF+ I
Sbjct: 141 EAIKYAQSKKMGFLETSAQTGHNIEFAFKQI 171
>gi|405960207|gb|EKC26148.1| Ras-related protein Rab-5B [Crassostrea gigas]
Length = 818
Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 11/209 (5%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT-IKAQIWDTAGQE 71
K+VL+G+SGVGKS++ RF R EFN ++TIG + T++I V T IK IWDTAGQE
Sbjct: 587 KLVLLGESGVGKSSIALRFVRGEFNENGEATIGAAYLTKTINVQNSTAIKFDIWDTAGQE 646
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
RY ++ YYRGA A++VYDI ++ + W++EL A+ IVI LVG + +
Sbjct: 647 RYHSLAPMYYRGAPAAVVVYDITSQTSFSRAQAWVKELTQQANSQIVIALVGNKADMAS- 705
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH-LRAVPADEA 190
G V I ++++ +RW RE+ D I+L+GNKSDL + LRAVP ++
Sbjct: 706 -EGRV-------IPTEVSFKEAQRWTREIIDFGGSCSYIILLGNKSDLSNDLRAVPYEDG 757
Query: 191 KTFAERNNLSFIETSALDSTNVETAFQNI 219
K FA N L F E SA NV+ F N+
Sbjct: 758 KEFASNNGLMFTEVSAKTGMNVDDVFTNL 786
>gi|413948488|gb|AFW81137.1| hypothetical protein ZEAMMB73_478467 [Zea mays]
Length = 186
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 87/95 (91%), Gaps = 2/95 (2%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVY--DIAKHL 97
WDTAGQERYRAITSAYYRGAVGAL+V A+HL
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALVVLRRHAARHL 100
>gi|224007553|ref|XP_002292736.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971598|gb|EED89932.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 195
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 115/211 (54%), Gaps = 51/211 (24%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I + K++K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIHIADKSVKLQIWDT 62
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQE +R+IT +YYRGA GALLVYDI + T++++ RWL E R H+ N+VIML+G
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFKHLGRWLEEARQHSQSNMVIMLIG---- 118
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
NK+DL H RAV
Sbjct: 119 -----------------------------------------------NKNDLEHRRAVST 131
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQN 218
+E K FA+++ L F+ETSA + NVE AF N
Sbjct: 132 EEGKAFADKHGLIFMETSAKTAYNVEQAFIN 162
>gi|321149939|gb|ADW66117.1| Rab-11B [Schmidtea mediterranea]
Length = 134
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 98/158 (62%), Gaps = 51/158 (32%)
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTA QERYRAITSA
Sbjct: 1 WDTAVQERYRAITSA--------------------------------------------- 15
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
YYRGAVGALLVYDI KH TYENVERWL+ELRDHAD NIVIMLVGNKSDLRHLR+
Sbjct: 16 ------YYRGAVGALLVYDIVKHATYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRS 69
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
VP ++AK FAER+N+SFIETSAL++TNVE AF IL+A
Sbjct: 70 VPREDAKAFAERHNISFIETSALEATNVEDAFIQILSA 107
>gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana]
Length = 258
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 119/214 (55%), Gaps = 51/214 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
T EYDYLFK++LIGDSGVGKS LL RF+ + + STIGV+F R+++ D KTIK
Sbjct: 55 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKL 114
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LV
Sbjct: 115 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLV 174
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NKSDL
Sbjct: 175 G---------------------------------------------------NKSDLTEN 183
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAF 216
RA+P + AK FA+ + F+ETSA D+TNVE AF
Sbjct: 184 RAIPYETAKAFADEIGIPFMETSAKDATNVEQAF 217
>gi|15217622|ref|NP_171715.1| Ras-related protein RABD2A [Arabidopsis thaliana]
gi|205371858|sp|P28188.3|RAD2A_ARATH RecName: Full=Ras-related protein RABD2a; Short=AtRABD2a; AltName:
Full=Ras-related protein Ara-5; AltName:
Full=Ras-related protein Rab1B; Short=AtRab1B
gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|332189266|gb|AEE27387.1| Ras-related protein RABD2A [Arabidopsis thaliana]
Length = 203
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 118/210 (56%), Gaps = 51/210 (24%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFK++LIGDSGVGKS LL RF+ + + STIGV+F R+++ D KTIK QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG--- 120
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL RA+P
Sbjct: 121 ------------------------------------------------NKSDLTENRAIP 132
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAF 216
+ AK FA+ + F+ETSA D+TNVE AF
Sbjct: 133 YETAKAFADEIGIPFMETSAKDATNVEQAF 162
>gi|348680772|gb|EGZ20588.1| hypothetical protein PHYSODRAFT_465114 [Phytophthora sojae]
Length = 360
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 126/215 (58%), Gaps = 54/215 (25%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
+ + KVVLIGDSGVGKSNL+ RFT+N++ S T+G EFAT++I+V + +KAQIWDTA
Sbjct: 97 ESILKVVLIGDSGVGKSNLVMRFTKNKYMPHSVQTVGFEFATKTIRVGDRRLKAQIWDTA 156
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER++++T+AYYR AVGA++VYDI ++E+V WL ++ +H+ +++V++LVG
Sbjct: 157 GQERFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWLAQVHEHSHESLVLILVG----- 211
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL---RAV 185
NK DL HL R V
Sbjct: 212 ----------------------------------------------NKCDLAHLPESREV 225
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
EA FA ++++ F+ETSALDSTNV AF+ ++
Sbjct: 226 STLEAARFAAKHSMEFLETSALDSTNVVDAFKKLI 260
>gi|260949313|ref|XP_002618953.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
gi|238846525|gb|EEQ35989.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
Length = 206
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 119/211 (56%), Gaps = 51/211 (24%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+EYDYLFK++LIGDSGVGKS LL RF N + + STIGV+F R+I++D KTIK QIW
Sbjct: 3 NEYDYLFKLLLIGDSGVGKSCLLLRFADNTYTQDYISTIGVDFKIRTIELDGKTIKLQIW 62
Query: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPP 125
DTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL+E
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQE----------------- 105
Query: 126 SLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 185
+ RY G V LLV GNK+DL + V
Sbjct: 106 --IDRYATGGVMKLLV--------------------------------GNKADLSDKKVV 131
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAF 216
AK FAE ++ F+ETSAL S+NVE AF
Sbjct: 132 EYTTAKEFAEALDIPFLETSALSSSNVEQAF 162
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 119/216 (55%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+++ D KTIK QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG--- 120
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NK DL RAVP
Sbjct: 121 ------------------------------------------------NKCDLTENRAVP 132
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+ AK FA+ + F+ETSA DSTNVE AF + ++
Sbjct: 133 YETAKAFADEIGIPFMETSAKDSTNVEQAFMAMASS 168
>gi|226507848|ref|NP_001151959.1| ras-related protein Rab11A [Zea mays]
gi|195651361|gb|ACG45148.1| ras-related protein Rab11A [Zea mays]
gi|223945145|gb|ACN26656.1| unknown [Zea mays]
gi|414886383|tpg|DAA62397.1| TPA: Ras protein Rab11A [Zea mays]
Length = 248
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 126/218 (57%), Gaps = 52/218 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
+E E DY+FKVV++GD+ VGK+ LL+RF R+EF L+SK TIGVEF TR++ + +K +K Q
Sbjct: 23 KEAEIDYVFKVVVVGDAAVGKTQLLARFARDEFALDSKPTIGVEFQTRTLTLHRKRVKTQ 82
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAGQERYRA+TSA
Sbjct: 83 IWDTAGQERYRAVTSA-------------------------------------------- 98
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL- 182
YYRGA+GA++VYD+ + T+E+V RW+ ELR HAD + V+ L+GNK+D+
Sbjct: 99 -------YYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSTVVALIGNKADMPAAR 151
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VPADEA AE L F E SAL NVE AF +L
Sbjct: 152 REVPADEAARLAEDQGLFFSEASALTGDNVERAFLTLL 189
>gi|116199639|ref|XP_001225631.1| hypothetical protein CHGG_07975 [Chaetomium globosum CBS 148.51]
gi|88179254|gb|EAQ86722.1| hypothetical protein CHGG_07975 [Chaetomium globosum CBS 148.51]
Length = 167
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 98/159 (61%), Gaps = 51/159 (32%)
Query: 35 EFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIA 94
+FNL+SKSTIGVEFATRSIQ+D KTI+AQIWDTAGQERYRAITSAYYRGAVGALLVYDI+
Sbjct: 7 DFNLDSKSTIGVEFATRSIQIDNKTIRAQIWDTAGQERYRAITSAYYRGAVGALLVYDIS 66
Query: 95 KHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVE 154
K L++ENV RWL+EL+ HAD NIVIMLVG
Sbjct: 67 KSLSFENVTRWLKELQGHADSNIVIMLVG------------------------------- 95
Query: 155 RWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKTF 193
NK+D R LRAVP ++ K F
Sbjct: 96 --------------------NKTDQRPLRAVPTEDGKNF 114
>gi|281209756|gb|EFA83924.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 207
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 115/209 (55%), Gaps = 51/209 (24%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
Y+Y+FK ++IGD GVGKS LL +FT N+F ++ TIGVEF TR + V+ K IK QIWDT
Sbjct: 5 YEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDNPHTIGVEFGTRIVDVNNKKIKLQIWDT 64
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQER+RA+T +YYRGA GALLVYDI + +TY ++ WL + R+ + N +IML+G
Sbjct: 65 AGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTNWLTDARNLTNPNTIIMLIG---- 120
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
NK DL R V
Sbjct: 121 -----------------------------------------------NKKDLEGQRDVTY 133
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAF 216
+EA TFA++N L F+E+SA NVE AF
Sbjct: 134 EEASTFAKQNGLIFVESSAKTGENVEEAF 162
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,274,953,558
Number of Sequences: 23463169
Number of extensions: 126075454
Number of successful extensions: 605796
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16629
Number of HSP's successfully gapped in prelim test: 6490
Number of HSP's that attempted gapping in prelim test: 555656
Number of HSP's gapped (non-prelim): 41489
length of query: 223
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 86
effective length of database: 9,144,741,214
effective search space: 786447744404
effective search space used: 786447744404
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)