BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15625
(223 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22129|RB11B_DIPOM Ras-related protein Rab-11B OS=Diplobatis ommata PE=2 SV=1
Length = 218
Score = 298 bits (763), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3
Length = 218
Score = 298 bits (762), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>sp|O35509|RB11B_RAT Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2
SV=4
Length = 218
Score = 298 bits (762), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4
Length = 218
Score = 298 bits (762), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3
Length = 218
Score = 298 bits (762), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 162/221 (73%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>sp|P62494|RB11A_RAT Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1
SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>sp|P62493|RB11A_RABIT Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2
SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>sp|Q5R9M7|RB11A_PONAB Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>sp|P62490|RB11A_CANFA Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3
Length = 216
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 160/221 (72%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1
Length = 216
Score = 293 bits (751), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 159/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MG R+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALDSTNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILT 170
>sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3
Length = 216
Score = 292 bits (748), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 159/221 (71%), Gaps = 51/221 (23%)
Query: 1 MGTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTI 60
MGTR+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTI
Sbjct: 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIM
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 120
Query: 121 LVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR 180
LVG S LR
Sbjct: 121 LVGNKSDLR--------------------------------------------------- 129
Query: 181 HLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAVP DEA+ FAE+N LSFIETSALD TNVE AFQ ILT
Sbjct: 130 HLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILT 170
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 259 bits (662), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 139/217 (64%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIQVD KTIKAQI
Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K +T+ENVERWL+ELRDHAD NIVIMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S L +HLR
Sbjct: 126 KSDL---------------------------------------------------KHLRD 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V + A+ F ER LSFIETSAL+STNVE AFQ ILT
Sbjct: 135 VQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILT 171
>sp|O49513|RAA1E_ARATH Ras-related protein RABA1e OS=Arabidopsis thaliana GN=RABA1E PE=2
SV=1
Length = 217
Score = 257 bits (657), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 153/217 (70%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF++ESKSTIGVEFATRS+ VD+K IKAQ+
Sbjct: 7 DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQL 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI +H+T+ENVERWL+ELRDH D N+VIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP +EA++F+ER N+ F+ETSALD+TNVE AF ++LT
Sbjct: 136 VPTEEARSFSERENMFFMETSALDATNVEQAFTHVLT 172
>sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2
SV=1
Length = 217
Score = 255 bits (652), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/222 (59%), Positives = 153/222 (68%), Gaps = 52/222 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R DE YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++QV+ +T
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+ K T+ENV RWL+ELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
ML+G NK+DL
Sbjct: 121 MLIG---------------------------------------------------NKTDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+HLRAV ++A+++AE+ LSFIETSAL++ NVE AFQ IL+
Sbjct: 130 KHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILS 171
>sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2
PE=2 SV=2
Length = 217
Score = 255 bits (651), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/217 (61%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+QVD K +KAQI
Sbjct: 8 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWL+ELRDH D NIV+MLVG
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 128 KSDLR---------------------------------------------------HLVA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V DE K FAER +L F+ETSAL+STNVE AF +LT
Sbjct: 137 VQTDEGKAFAERESLYFMETSALESTNVENAFAEVLT 173
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 255 bits (651), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/219 (60%), Positives = 149/219 (68%), Gaps = 51/219 (23%)
Query: 3 TREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKA 62
+EDEYDYLFK VLIGDSGVGKSNLL RFTRNEFN+ESKSTIGVEFATR+I +D K IKA
Sbjct: 2 CQEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKA 61
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
QIWDTAGQERYRAITSAYYRGAVGAL+VYDI K +++NV RWL+ELR+HAD NIVIMLV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLV 121
Query: 123 GPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHL 182
G NK+DL HL
Sbjct: 122 G---------------------------------------------------NKTDLLHL 130
Query: 183 RAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
RAV +EA+ FA NNLSFIETSA+D++NVE AFQ +LT
Sbjct: 131 RAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLT 169
>sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1
Length = 217
Score = 254 bits (650), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 149/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFK+VLIGDSGVGKSNLLSRF+RNEFNLESKSTIGVEFATRSI+VD K +KAQI
Sbjct: 8 EDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQI 67
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGAL+VYDI +H+T+ENVERWL+ELRDH DQNIVIMLVG
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGN 127
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 128 KADLR---------------------------------------------------HLRA 136
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER N F+ETSAL+S NVE AF +LT
Sbjct: 137 VSTEDAKAFAERENTFFMETSALESLNVENAFTEVLT 173
>sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2
SV=1
Length = 217
Score = 251 bits (642), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 146/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIM VG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER N F+ETSAL+S NVE AF +L+
Sbjct: 136 VSTEDAKAFAERENTFFMETSALESMNVENAFTEVLS 172
>sp|Q1PEX3|RAA1H_ARATH Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2
SV=1
Length = 218
Score = 249 bits (637), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 149/223 (66%), Gaps = 53/223 (23%)
Query: 1 MGT--REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQK 58
MGT ED+YDYLFKVVL GDSGVGKSNLLSRFTRN+F+ +S+STIGVEFATRSIQVD K
Sbjct: 1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60
Query: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D N V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120
Query: 119 IMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
IMLVG NK+D
Sbjct: 121 IMLVG---------------------------------------------------NKAD 129
Query: 179 LRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
L HLRA+ +E K FAER N F+ETSAL++ NVE AF +LT
Sbjct: 130 LNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLT 172
>sp|Q9SN35|RAA1D_ARATH Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2
SV=1
Length = 214
Score = 249 bits (637), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ V++K IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVERWLRELRDH D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK+FAE +L F+ETSAL+STNVE AF +LT
Sbjct: 136 VQTEDAKSFAENESLYFMETSALESTNVENAFSEVLT 172
>sp|P36412|RB11A_DICDI Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A
PE=1 SV=1
Length = 214
Score = 249 bits (636), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 151/217 (69%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LE+KSTIGVEFATR+IQ + KTIKAQ+
Sbjct: 7 QEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQV 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDIAK TY++VERW+ ELR++AD+NI IMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HLR
Sbjct: 127 KSDLR---------------------------------------------------HLRE 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V DEAK F+E++ L+FIETSALDS+NVE AFQNILT
Sbjct: 136 VSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILT 172
>sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1
Length = 214
Score = 248 bits (632), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 148/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G S DL
Sbjct: 121 MMAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+HLRAV ++ + AE+ LSF+ETSAL++ N+E AFQ ILT
Sbjct: 130 KHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILT 171
>sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1
Length = 216
Score = 248 bits (632), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 147/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV+RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G S DL
Sbjct: 121 MMAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV D+ +E+ LSF+ETSAL++TN+E AFQ ILT
Sbjct: 130 NHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILT 171
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 246 bits (629), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+D+YD+L+KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI VD+K +KAQI
Sbjct: 7 DDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH + NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK FAER N F+ETSAL++ NVE AF +L+
Sbjct: 136 VSTEDAKAFAERENTFFMETSALEALNVENAFTEVLS 172
>sp|Q01111|YPT3_NICPL Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2
SV=1
Length = 218
Score = 246 bits (628), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 144/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+S+ +D K IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+TYENV RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V DEAK AER L F+ETSAL++TNVE AF LT
Sbjct: 136 VSTDEAKGLAEREGLYFMETSALEATNVENAFTEALT 172
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 245 bits (626), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 147/217 (67%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENVE WL+ELR+H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++AK+FAE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLT 172
>sp|Q9LNW1|RAA2B_ARATH Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2
SV=2
Length = 214
Score = 245 bits (626), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 148/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T+ENV RWLRELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+ G S DL
Sbjct: 121 MMAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLR+V ++ ++ AE+ LSF+ETSAL++TN+E AFQ IL+
Sbjct: 130 NHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILS 171
>sp|Q9FIF9|RAA2D_ARATH Ras-related protein RABA2d OS=Arabidopsis thaliana GN=RABA2D PE=2
SV=1
Length = 217
Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 146/216 (67%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
E +YDYLFK+VLIGDSGVGK+N+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 6 EQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ G
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAG- 124
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
NK+DL HLR+
Sbjct: 125 --------------------------------------------------NKADLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++ +T AE LSF+ETSAL++TNVE AFQ +L
Sbjct: 135 VAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVL 170
>sp|Q39222|RAA1B_ARATH Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2
SV=1
Length = 216
Score = 244 bits (622), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 148/217 (68%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATR+++VD K +KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+ENV+RWL+EL++H D NIV+MLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLLA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K++AE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLT 172
>sp|Q96283|RAA2C_ARATH Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2
SV=4
Length = 217
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 144/216 (66%), Gaps = 51/216 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+ QV+ KTIKAQI
Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQI 65
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ G
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGN 125
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S DL HLR+
Sbjct: 126 KS---------------------------------------------------DLNHLRS 134
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++ ++ AE+ LSF+ETSAL++TNVE AFQ IL
Sbjct: 135 VAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTIL 170
>sp|Q40723|RLGP2_ORYSJ Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2
PE=2 SV=2
Length = 217
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 148/222 (66%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R D EY YLFK+VLIGDSGVGKSN+LSRFTRN F+L+SKSTIGVEFAT+S+Q++ KT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K +++NV RWLRELRDHAD +IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
M+VG NKSDL
Sbjct: 121 MMVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
HLRAV DE K AE+ L F+ETSA+++ NVE AFQ I+T
Sbjct: 130 IHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIIT 171
>sp|Q9S810|RAA1I_ARATH Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2
SV=1
Length = 218
Score = 243 bits (620), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
ED+YDYLFKVVL GDSGVGKSNLLSRFTRN+F+ +S++TIGVEFATRSIQ D K +KAQI
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVG
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
+ LR HLRA
Sbjct: 127 KADLR---------------------------------------------------HLRA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+ +EAK FAER N F+ETSAL++ NV+ AF +LT
Sbjct: 136 ISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLT 172
>sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1
Length = 218
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 145/217 (66%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+++ VD K +KAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+EN RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL A
Sbjct: 127 KSDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
VP ++ K+FAER +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VPTEDGKSFAERESLYFMETSALEATNVENAFTEVLT 172
>sp|P28185|RAA1A_ARATH Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1
SV=1
Length = 216
Score = 239 bits (610), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 143/217 (65%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT++ +V+ K +KAQI
Sbjct: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALL+YD+ +H T+EN RWLRELR H D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
LR HL A
Sbjct: 127 KCDLR---------------------------------------------------HLVA 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V +EAK FAER +L F+ETSALD+TNVE AF +LT
Sbjct: 136 VKTEEAKAFAERESLYFMETSALDATNVENAFTEVLT 172
>sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1
Length = 218
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 141/217 (64%), Gaps = 51/217 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+DEYDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFAT+S+ +D K IKAQI
Sbjct: 7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQI 66
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+E RWL+ELRDH D NIV+ML+G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGN 126
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
S LR HL
Sbjct: 127 KSDLR---------------------------------------------------HLVT 135
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
V ++ K FAE+ +L F+ETSAL++TNVE AF +LT
Sbjct: 136 VSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLT 172
>sp|Q40523|RB11A_TOBAC Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1
Length = 216
Score = 234 bits (596), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 125/222 (56%), Positives = 144/222 (64%), Gaps = 52/222 (23%)
Query: 1 MGTRED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
M R D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAGQERYRAITSAYYRGAVGALL YDI K T++NV+RWLRELRDH D NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVI 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
+L G S DL
Sbjct: 121 ILAGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+HLRAV + + ++ LSF+ETSAL++ NV+ AFQ ILT
Sbjct: 130 KHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILT 171
>sp|P38555|YPT31_YEAST GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YPT31 PE=1 SV=3
Length = 223
Score = 231 bits (588), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 142/214 (66%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YD LFK+VLIGDSGVGKSNLLSRFT+NEFN++SKSTIGVEFATR++++D K IKAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIG--- 125
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
NKSDL HLRAVP
Sbjct: 126 ------------------------------------------------NKSDLAHLRAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+E+KTFA+ N L F ETSAL+S NV+ AF+ ++
Sbjct: 138 TEESKTFAQENQLLFTETSALNSENVDKAFEELI 171
>sp|P25766|RLGP1_ORYSJ Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1
PE=2 SV=2
Length = 226
Score = 230 bits (586), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 140/213 (65%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF RNEFNL+SK+TIGVEF TR++ +D +T+KAQIWDTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTA 75
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K ++++V RWL ELR HAD+NIVIML+G
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIG----- 130
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NKSDL LR VP +
Sbjct: 131 ----------------------------------------------NKSDLGTLRVVPTE 144
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FAER NL F+ETSAL+STNVE AF +LT
Sbjct: 145 DAKEFAERENLFFMETSALESTNVENAFMTVLT 177
>sp|Q9FE79|RAA4C_ARATH Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2
SV=1
Length = 223
Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 143/213 (67%), Gaps = 51/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
DY+FKVVLIGDS VGKS LL+RF+RNEF++ESK+TIGVEF TR++++D+KTIKAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTA 72
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQERYRA+TSAYYRGAVGA+LVYDI K ++++V RWL ELR HAD+NIVIML+G
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIG----- 127
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
NK+DL LRAVP +
Sbjct: 128 ----------------------------------------------NKTDLGTLRAVPTE 141
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
+AK FA+R NL F+ETSALDS NVE +F +LT
Sbjct: 142 DAKEFAQRENLFFMETSALDSNNVEPSFLTVLT 174
>sp|Q9WTL2|RAB25_MOUSE Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2
Length = 213
Score = 224 bits (572), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 141/221 (63%), Gaps = 52/221 (23%)
Query: 1 MGTREDE-YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R DE Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NKSDL
Sbjct: 121 MLVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA FAE N L F+ETSALDSTNVE AFQ +L
Sbjct: 130 SQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVL 170
>sp|Q58DW6|RAB25_BOVIN Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1
Length = 213
Score = 223 bits (569), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 118/221 (53%), Positives = 143/221 (64%), Gaps = 52/221 (23%)
Query: 1 MGTR-EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG NKSDL
Sbjct: 121 MLVG---------------------------------------------------NKSDL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 SQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>sp|P57735|RAB25_HUMAN Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2
Length = 213
Score = 222 bits (566), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 141/219 (64%), Gaps = 52/219 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
GT ED Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +K
Sbjct: 4 GTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+ML
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
VG NKSDL
Sbjct: 123 VG---------------------------------------------------NKSDLSQ 131
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 132 AREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>sp|P46629|RAB25_RABIT Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2
SV=1
Length = 213
Score = 221 bits (563), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 141/217 (64%), Gaps = 51/217 (23%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQ 63
+E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ + +KAQ
Sbjct: 5 KEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQ 64
Query: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
IWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+MLVG
Sbjct: 65 IWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG 124
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
NKSDL R
Sbjct: 125 ---------------------------------------------------NKSDLSQAR 133
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 134 EVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1
Length = 226
Score = 220 bits (561), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 142/220 (64%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SKSTIGVEF TR++ +D KT+K
Sbjct: 8 GDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVK 67
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K T++++ RWL ELR+HAD+NIVI+L
Sbjct: 68 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIIL 127
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK DL +
Sbjct: 128 IG---------------------------------------------------NKCDLVN 136
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
R VP ++AK FAE+ L F+ETSAL++TNVE+AF +LT
Sbjct: 137 QRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLT 176
>sp|Q9LH50|RAA4D_ARATH Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1
SV=1
Length = 222
Score = 220 bits (560), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 143/220 (65%), Gaps = 51/220 (23%)
Query: 2 GTREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
G + DY+FKVVLIGDS VGK+ LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 6 GDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVK 65
Query: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML 121
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+ K +++++ +WL ELR HAD+NIVIML
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIML 125
Query: 122 VGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH 181
+G NK DL
Sbjct: 126 IG---------------------------------------------------NKCDLGS 134
Query: 182 LRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
LRAVP ++A+ FA+R NL F+ETSAL++TNVETAF ILT
Sbjct: 135 LRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILT 174
>sp|E2RQ15|RAB25_CANFA Ras-related protein Rab-25 OS=Canis familiaris GN=RAB25 PE=3 SV=1
Length = 213
Score = 219 bits (558), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 141/221 (63%), Gaps = 52/221 (23%)
Query: 1 MGTR-EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
MG R E++Y+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ +
Sbjct: 1 MGNRTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
IKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+ KH TY VERWL+EL DHA+ IV+
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 120 MLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL 179
MLVG S DL
Sbjct: 121 MLVGNKS---------------------------------------------------DL 129
Query: 180 RHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
R VP +EA+ FAE N L F+ETSALDSTNVE AF+ +L
Sbjct: 130 HQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL 170
>sp|P51996|YPT32_YEAST GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YPT32 PE=1 SV=3
Length = 222
Score = 219 bits (558), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 140/216 (64%), Gaps = 51/216 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR+I+V+ K IKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQERYRAITSAYYRGAVGAL+VYDI+K +YEN WL ELR++AD N+ + L+G S
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
D+A HL RAVP
Sbjct: 129 ----------------DLA-HL----------------------------------RAVP 137
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
DEAK FA N + F ETSAL+S NV+ AF+ ++ A
Sbjct: 138 TDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVA 173
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,263,918
Number of Sequences: 539616
Number of extensions: 2993222
Number of successful extensions: 17625
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 15117
Number of HSP's gapped (non-prelim): 2077
length of query: 223
length of database: 191,569,459
effective HSP length: 113
effective length of query: 110
effective length of database: 130,592,851
effective search space: 14365213610
effective search space used: 14365213610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)