RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15625
(223 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 147 bits (372), Expect = 1e-45
Identities = 78/214 (36%), Positives = 110/214 (51%), Gaps = 51/214 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
YDYLFK++LIGDSGVGK+ +L RF+ + FN STIG++F R+I++D K IK QIWD
Sbjct: 2 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 61
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQER+R IT
Sbjct: 62 TAGQERFRTIT------------------------------------------------- 72
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
YYRGA+G +LVYDI +++N+ W+R + +HA ++ M++GNK D+ R V
Sbjct: 73 --TAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVS 130
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ + A + F+ETSA + NVE AF +
Sbjct: 131 KERGEKLALDYGIKFMETSAKANINVENAFFTLA 164
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 146 bits (369), Expect = 4e-45
Identities = 151/214 (70%), Positives = 155/214 (72%), Gaps = 51/214 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD KTIKAQIWDT
Sbjct: 1 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 60
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYR IT
Sbjct: 61 AGQERYRRIT-------------------------------------------------- 70
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
YYRGAVGALLVYDIAKHLTYENVERWL+ELRDHAD NIVIMLVGNKSDLRHLRAVP
Sbjct: 71 -SAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPT 129
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
DEA+ FAE+NNLSFIETSALDSTNVE AF+NILT
Sbjct: 130 DEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 163
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 142 bits (358), Expect = 2e-43
Identities = 60/117 (51%), Positives = 89/117 (76%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
EYDYLFK++LIG+SGVGKS LL RF+ + + + STIGV+F +++++D KT+K QIWD
Sbjct: 2 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 61
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG 123
TAGQER+R ITS+YYRG+ G ++VYD+ ++ V+ WL+E+ +A ++ +LVG
Sbjct: 62 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVG 118
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 139 bits (350), Expect = 2e-42
Identities = 71/215 (33%), Positives = 110/215 (51%), Gaps = 51/215 (23%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+YD+LFK+VLIG++GVGK+ L+ RFT+ F +TIGV+F ++++++ + +K QIWD
Sbjct: 1 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWD 60
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQER+R+IT
Sbjct: 61 TAGQERFRSIT------------------------------------------------- 71
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
+ YYR A +L YDI ++ + WLRE+ +A ++ +LVGNK DL R V
Sbjct: 72 --QSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVS 129
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
A+ F+E ++ ++ETSA +S NVE F ++
Sbjct: 130 QQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLAC 164
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 137 bits (347), Expect = 7e-42
Identities = 70/209 (33%), Positives = 106/209 (50%), Gaps = 52/209 (24%)
Query: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQ 70
+ K++LIGDSGVGKS LL RF ++FN +TIG++F +++ ++ K +K QIWDTAGQ
Sbjct: 2 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQ 61
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRR 130
ER+R IT+AYYRGA+G +LVYDI T+ N+++W + + +HA+ ++LVG S +
Sbjct: 62 ERFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-- 119
Query: 131 YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEA 190
R V AD+
Sbjct: 120 --------------------------------------------------ETRVVTADQG 129
Query: 191 KTFAERNNLSFIETSALDSTNVETAFQNI 219
+ A+ + FIE+SA + NV F +
Sbjct: 130 EALAKELGIPFIESSAKNDDNVNEIFFTL 158
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 138 bits (347), Expect = 7e-42
Identities = 71/216 (32%), Positives = 105/216 (48%), Gaps = 52/216 (24%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLES-KSTIGVEFATRSIQVDQKTIKAQI 64
D YD FKV+L+GDSGVGK+ LL RF F + ST+G++F + + VD +K Q+
Sbjct: 1 DFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQM 60
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+R++T
Sbjct: 61 WDTAGQERFRSVT----------------------------------------------- 73
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
YYR A LL+YD+ +++N++ WL E+ ++A ++ +ML+GNK D H R
Sbjct: 74 ----HAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERV 129
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
V ++ + A+ L F+ETSA NV+ AF I
Sbjct: 130 VKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA 165
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 137 bits (345), Expect = 1e-41
Identities = 88/215 (40%), Positives = 110/215 (51%), Gaps = 51/215 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR I+V + IK QIWDT
Sbjct: 1 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 60
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQER+RA+T
Sbjct: 61 AGQERFRAVT-------------------------------------------------- 70
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
R YYRGA GAL+VYDI + TY ++ WL + R+ + N VI+L+GNK+DL R V
Sbjct: 71 -RSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTY 129
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+EAK FAE N L F+E SA NVE AF
Sbjct: 130 EEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKK 164
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 135 bits (341), Expect = 7e-41
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 60/224 (26%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV----------D 56
+YDYL K++ +GDSGVGK+ L R+T N+FN + +T+G++F + +
Sbjct: 1 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 60
Query: 57 QKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQN 116
+ Q+WDTAGQER+R++T+A++R A+G LL++D+ ++ NV W
Sbjct: 61 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNW----------- 109
Query: 117 IVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 176
+ + +N I+L+GNK
Sbjct: 110 ---------------------------------------MSQLQANAYCENPDIVLIGNK 130
Query: 177 SDLRHLRAVPADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+DL R V +A+ A++ + + ETSA NVE A + +L
Sbjct: 131 ADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 174
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 134 bits (338), Expect = 1e-40
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 51/213 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
+DY+FK+++IG+S VGK++ L R+ + F ST+G++F ++I + K IK QIWDT
Sbjct: 2 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 61
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQERYR IT
Sbjct: 62 AGQERYRTIT-------------------------------------------------- 71
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
YYRGA+G +L+YDI ++ V+ W +++ ++ N ++LVGNK D+ R V +
Sbjct: 72 -TAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSS 130
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ + A+ F E SA D+ NV+ F+ ++
Sbjct: 131 ERGRQLADHLGFEFFEASAKDNINVKQTFERLV 163
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 129 bits (325), Expect = 1e-38
Identities = 87/213 (40%), Positives = 108/213 (50%), Gaps = 51/213 (23%)
Query: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
YLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D K IK QIWDTAG
Sbjct: 2 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 61
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLR 129
QE +R+IT R
Sbjct: 62 QESFRSIT---------------------------------------------------R 70
Query: 130 RYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADE 189
YYRGA GALLVYDI + T+ ++ WL + R H+ N+VIML+GNKSDL R V +E
Sbjct: 71 SYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREE 130
Query: 190 AKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
+ FA + L F+ETSA + NVE AF N
Sbjct: 131 GEAFAREHGLIFMETSAKTACNVEEAFINTAKE 163
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 129 bits (324), Expect = 2e-38
Identities = 88/215 (40%), Positives = 107/215 (49%), Gaps = 51/215 (23%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
YD+LFK ++IG++G GKS LL +F +F +S TIGVEF ++ I V K +K QIWDT
Sbjct: 2 YDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDT 61
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
AGQER+R++T
Sbjct: 62 AGQERFRSVT-------------------------------------------------- 71
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
R YYRGA GALLVYDI TY + WL + R A QNIVI+L GNK DL R V
Sbjct: 72 -RSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTF 130
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
EA FA+ N L F+ETSAL NVE AF
Sbjct: 131 LEASRFAQENELMFLETSALTGENVEEAFVQCARK 165
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 124 bits (313), Expect = 1e-36
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 51/218 (23%)
Query: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI 64
+++ K+++IG+SGVGKS+LL RFT + F+ E +TIGV+F ++I VD K I
Sbjct: 1 DEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAI 60
Query: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGP 124
WDTAGQER+R +T
Sbjct: 61 WDTAGQERFRTLT----------------------------------------------- 73
Query: 125 PSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRA 184
YYRGA G +LVYD+ + T+ ++ WL EL + +N ++ ++ + R
Sbjct: 74 ----PSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENRE 129
Query: 185 VPADEAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
V +E FA ++++ FIE SA V+ AF+ ++
Sbjct: 130 VDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEK 167
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 121 bits (305), Expect = 9e-36
Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 51/211 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
FK+V +G+ VGK++L++RF + F+ ++TIG++F ++++ ++ +TI+ Q+WDTAGQE
Sbjct: 1 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 60
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
R+R++ Y
Sbjct: 61 RFRSLI---------------------------------------------------PSY 69
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
R + A++VYDI +++ +W+ ++R +++IMLVGNK+DL R V +E +
Sbjct: 70 IRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGE 129
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNILTA 222
A+ N+ FIETSA NV+ F+ + A
Sbjct: 130 RKAKELNVMFIETSAKAGYNVKQLFRRVAAA 160
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 116 bits (292), Expect = 9e-34
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 51/209 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
+KVV++G GVGKS L +F F + TI +F + I+VD +I DTAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTE 62
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
++ ++ Y + G +LVY + ++++++ ++
Sbjct: 63 QFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRV------------------- 103
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
+ + ++LVGNK DL R V + E +
Sbjct: 104 -------------------------------KRYEKVPVILVGNKVDLESEREVSSSEGR 132
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNIL 220
AE F+ETSA T V+ F I+
Sbjct: 133 ALAEEWGCPFMETSAKSKTMVDELFAEIV 161
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 116 bits (291), Expect = 2e-33
Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 49/213 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
LFKV+L+GD GVGKS+L++R+ N+F+ + TIGVEF + ++VD + QIWDTA
Sbjct: 4 SSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTA 63
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQER+R++ + +YRG+ LL + + +++N+ W +E +AD
Sbjct: 64 GQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVK------------ 111
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
++ +++GNK D+ R V +
Sbjct: 112 -----------------------------------EPESFPFVILGNKIDISE-RQVSTE 135
Query: 189 EAKTFAERN-NLSFIETSALDSTNVETAFQNIL 220
EA+ + N + + ETSA D+TNV AF+ +
Sbjct: 136 EAQAWCRDNGDYPYFETSAKDATNVAAAFEEAV 168
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 112 bits (280), Expect = 7e-32
Identities = 75/209 (35%), Positives = 108/209 (51%), Gaps = 51/209 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
FK+VL+G+S VGKS+L+ RF + +F+ +STIG F T+++ +D T+K +IWDTAGQE
Sbjct: 7 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 66
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
RY ++ Y
Sbjct: 67 RYHSLA---------------------------------------------------PMY 75
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
YRGA A++VYDI ++ + W++EL+ A NIVI L GNK+DL + RAV EA+
Sbjct: 76 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 135
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNIL 220
++A+ N+L F+ETSA S NV F I
Sbjct: 136 SYADDNSLLFMETSAKTSMNVNEIFMAIA 164
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 110 bits (274), Expect = 5e-31
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 51/210 (24%)
Query: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQ 70
L KV+++G GVGKS L +F +EF + + T + + + +D + ++ I DTAGQ
Sbjct: 4 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSY-RKKVVLDGEEVQIDILDTAGQ 62
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRR 130
E Y AI Y+R G L V+ I + ++ + ++
Sbjct: 63 EDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQI--------------------- 101
Query: 131 YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEA 190
LR D+N+ +LVGNKSDL R V +EA
Sbjct: 102 -----------------------------LRVKEDENVPFLLVGNKSDLEDKRQVSVEEA 132
Query: 191 KTFAERNNLSFIETSALDSTNVETAFQNIL 220
K A++ N++++ETSA NV+ F +++
Sbjct: 133 KNRADQWNVNYVETSAKTRANVDKVFFDLM 162
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 109 bits (273), Expect = 7e-31
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 51/211 (24%)
Query: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
Y FKVVL+G+ VGK++L+ R+ N+FN + +T+G F T+ + + K + IWDTAG
Sbjct: 2 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAG 61
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLR 129
QER+ A+
Sbjct: 62 QERFHALG---------------------------------------------------P 70
Query: 130 RYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADE 189
YYR + GA+LVYDI +++ V+ W++ELR I + +VGNK DL R V E
Sbjct: 71 IYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQE 130
Query: 190 AKTFAERNNLSFIETSALDSTNVETAFQNIL 220
A+++AE TSA + +E F ++
Sbjct: 131 AESYAESVGAKHYHTSAKQNKGIEELFLDLC 161
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 106 bits (264), Expect = 1e-29
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 54/213 (25%)
Query: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQ 70
+FK+++IGDS VGK+ L RF F +++TIGV+F R++ +D + IK Q+WDTAGQ
Sbjct: 2 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQ 61
Query: 71 ERY-RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLR 129
ER+ +++ YYR + VYD+ ++ ++ W+ E + H N
Sbjct: 62 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLAN------------- 108
Query: 130 RYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADE 189
+I +LVGNK DLR VP D
Sbjct: 109 -------------------------------------DIPRILVGNKCDLRSAIQVPTDL 131
Query: 190 AKTFAERNNLSFIETSALDST---NVETAFQNI 219
A+ FA+ +++ ETSA + +VE F +
Sbjct: 132 AQKFADTHSMPLFETSAKNPNDNDHVEAIFMTL 164
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 105 bits (261), Expect = 6e-29
Identities = 42/217 (19%), Positives = 76/217 (35%), Gaps = 41/217 (18%)
Query: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWD 66
+ K V++GD VGK+ LL + + F E T+ + S+ V K ++D
Sbjct: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYD 63
Query: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
TAGQE Y + Y L+ + + +++NV+ N+ +L+G
Sbjct: 64 TAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQI 123
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
L D K L N + + +
Sbjct: 124 DL-------------RDDPKTLARLNDMKE--------------------------KPIC 144
Query: 187 ADEAKTFAERNN-LSFIETSALDSTNVETAFQNILTA 222
++ + A+ ++E SAL ++T F + A
Sbjct: 145 VEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 181
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 104 bits (259), Expect = 7e-29
Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 51/214 (23%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
K+V++G GVGKS L +F ++ F + T+ VD + I DTA
Sbjct: 4 SETHKLVVVGGGGVGKSALTIQFIQSYFV-SDYDPTIEDSYTKICSVDGIPARLDILDTA 62
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQE + A+ Y R G LLV+ I ++ V +
Sbjct: 63 GQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKL----------------------- 99
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPAD 188
+ + LR + ++LVGNK+DL R VP
Sbjct: 100 ---------------------------FTQILRVKDRDDFPVVLVGNKADLESQRQVPRS 132
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILTA 222
EA F +++++ E SA NV+ AF+ ++ A
Sbjct: 133 EASAFGASHHVAYFEASAKLRLNVDEAFEQLVRA 166
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 101 bits (252), Expect = 1e-27
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 51/209 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
+++V++G GVGKS L +F ++ F + TI + T+ +D + + I DTAGQE
Sbjct: 6 YRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIE-DSYTKQCVIDDRAARLDILDTAGQE 64
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
+ A+ Y R G LLV+ + ++E + ++ R+
Sbjct: 65 EFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQ----------------------- 101
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
LR ++L+GNK+DL H R V +E +
Sbjct: 102 ---------------------------ILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQ 134
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNIL 220
A + ++++E SA NV+ AF ++
Sbjct: 135 QLARQLKVTYMEASAKIRMNVDQAFHELV 163
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 100 bits (250), Expect = 1e-27
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 52/210 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
+K+V++G GVGKS L +F + F + TI + + ++VD + +I DTAG E
Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDCQQCMLEILDTAGTE 62
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
++ A+ Y + G LVY I T+ +++
Sbjct: 63 QFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDL-------------------------- 96
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
+ LR +++ ++LVGNK DL R V ++ +
Sbjct: 97 ------------------------REQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQ 132
Query: 192 TFAER-NNLSFIETSALDSTNVETAFQNIL 220
A + N +F+E+SA NV F +++
Sbjct: 133 NLARQWCNCAFLESSAKSKINVNEIFYDLV 162
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 101 bits (252), Expect = 1e-27
Identities = 41/212 (19%), Positives = 73/212 (34%), Gaps = 41/212 (19%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
K V++GD VGK+ LL +T N+F E T+ + ++ + + ++DTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVF-DNYAVTVMIGGEPYTLGLFDTAGQE 62
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
Y + Y L+ + + ++ENV+ H +LVG LR
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD- 121
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
+ E + + + A+
Sbjct: 122 ----------------------DPSTIEKLAK----------------NKQKPITPETAE 143
Query: 192 TFAER-NNLSFIETSALDSTNVETAFQNILTA 222
A + ++E SAL ++ F + A
Sbjct: 144 KLARDLKAVKYVECSALTQKGLKNVFDEAILA 175
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 100 bits (250), Expect = 2e-27
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 47/210 (22%)
Query: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQ 70
L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ + VD + + QIWDTAGQ
Sbjct: 2 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 61
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRR 130
ER++++ A+YRGA +LV+D+ T++ ++ W E A
Sbjct: 62 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA----------------- 104
Query: 131 YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEA 190
+N +++GNK DL + +
Sbjct: 105 ------------------------------SPRDPENFPFVVLGNKIDLENRQVATKRAQ 134
Query: 191 KTFAERNNLSFIETSALDSTNVETAFQNIL 220
+NN+ + ETSA ++ NVE AFQ I
Sbjct: 135 AWCYSKNNIPYFETSAKEAINVEQAFQTIA 164
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 100 bits (249), Expect = 2e-27
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 51/208 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
KV L+GD+GVGKS+++ RF + F+ TIG F T+++Q + K IWDTAG E
Sbjct: 5 LKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLE 64
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
R+RA+ Y
Sbjct: 65 RFRALA---------------------------------------------------PMY 73
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
YRG+ A++VYDI K T+ ++ W+RELR H +IV+ + GNK DL +R V +AK
Sbjct: 74 YRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAK 133
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNI 219
+A+ + F+ETSA ++ N+ F I
Sbjct: 134 DYADSIHAIFVETSAKNAININELFIEI 161
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 99.3 bits (246), Expect = 7e-27
Identities = 52/211 (24%), Positives = 85/211 (40%), Gaps = 52/211 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
+K+V++G GVGKS L + +N F E TI + + + D +T I DTAGQE
Sbjct: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVI-DGETCLLDILDTAGQE 62
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
Y A+ Y R G L V+ I ++E++ ++ +++ D +
Sbjct: 63 EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSD--------------- 107
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
++ ++LVGNK D R V + +A+
Sbjct: 108 -----------------------------------DVPMVLVGNKCD-LAARTVESRQAQ 131
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNILTA 222
A + +IETSA VE AF ++
Sbjct: 132 DLARSYGIPYIETSAKTRQGVEDAFYTLVRE 162
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 97.8 bits (242), Expect = 3e-26
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 52/210 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
+K+V++GD GVGKS L +F + F + TI + + ++D + + DTAGQE
Sbjct: 5 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSY-LKHTEIDNQWAILDVLDTAGQE 63
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
+ A+ Y R G L+VY + ++E+V+R+
Sbjct: 64 EFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRF-------------------------- 97
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
LR ++ ++LV NK DL HLR V D+ K
Sbjct: 98 ------------------------HQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGK 133
Query: 192 TFAERNNLSFIETSALDST-NVETAFQNIL 220
A + N+ +IETSA D NV+ F +++
Sbjct: 134 EMATKYNIPYIETSAKDPPLNVDKTFHDLV 163
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 97.4 bits (241), Expect = 5e-26
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 48/208 (23%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQER 72
K+VL+G++ VGKS+++ RF N+F + TIG F T+ + +++ T+K +IWDTAGQER
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYY 132
+ ++ YYR A AL+VYD+ K ++ W++EL + A ++I+I LVG
Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVG--------- 115
Query: 133 RGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKT 192
D + R V +E +
Sbjct: 116 --------------------------NKIDMLQEG-------------GERKVAREEGEK 136
Query: 193 FAERNNLSFIETSALDSTNVETAFQNIL 220
AE L F ETSA NV F I
Sbjct: 137 LAEEKGLLFFETSAKTGENVNDVFLGIG 164
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 94.7 bits (234), Expect = 4e-25
Identities = 48/209 (22%), Positives = 76/209 (36%), Gaps = 50/209 (23%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
++V + G GVGKS+L+ RF + F T+ + D+ QI DT G
Sbjct: 3 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISC-DKSICTLQITDTTGSH 61
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
++ A+ +LVY I + E ++ ++ +
Sbjct: 62 QFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIK------------------ 103
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
++I IMLVGNK D R V + EA+
Sbjct: 104 -------------------------------GDVESIPIMLVGNKCDESPSREVQSSEAE 132
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNIL 220
A +F+ETSA + NV+ FQ +L
Sbjct: 133 ALARTWKCAFMETSAKLNHNVKELFQELL 161
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 95.1 bits (235), Expect = 4e-25
Identities = 49/224 (21%), Positives = 76/224 (33%), Gaps = 65/224 (29%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
K V++GD VGK+ LL +T N F E T+ + + ++ VD K + +WDTAGQE
Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGQE 64
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
Y +
Sbjct: 65 DYDRLR---------------------------------------------------PLS 73
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP----- 186
Y +L+ + + ++ENV H N I+LVG K DLR +
Sbjct: 74 YPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKE 133
Query: 187 -------ADEAKTFA-ERNNLSFIETSALDSTNVETAFQNILTA 222
+ A E + ++E SAL ++T F + A
Sbjct: 134 KKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRA 177
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 94.8 bits (234), Expect = 5e-25
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 50/212 (23%)
Query: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI-QVDQKTIKAQIWDTAG 69
+ KV+++GDSGVGK++L+ R+ ++++ + K+TIG +F T+ + K Q+WDTAG
Sbjct: 2 ILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAG 61
Query: 70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLR 129
QER++++ A+YRGA +LVYD+ ++EN++ W E HA+ N
Sbjct: 62 QERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVN------------- 108
Query: 130 RYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADE 189
+ + +++GNK D + + +++
Sbjct: 109 ----------------------------------SPETFPFVILGNKIDAEESKKIVSEK 134
Query: 190 AKTF--AERNNLSFIETSALDSTNVETAFQNI 219
+ ++ TSA ++ NV+TAF+ I
Sbjct: 135 SAQELAKSLGDIPLFLTSAKNAINVDTAFEEI 166
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 93.2 bits (230), Expect = 2e-24
Identities = 46/209 (22%), Positives = 73/209 (34%), Gaps = 41/209 (19%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
K+V++GD GK+ LL ++++F T+ E I+VD K ++ +WDTAG E
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVF-ENYVADIEVDGKQVELALWDTAGLE 61
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
Y + Y L+ + I + EN+ H N+ I+LVG
Sbjct: 62 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVG-------- 113
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
N E REL + + +E +
Sbjct: 114 --------------NKKDLRNDEHTRRELAKMKQEPV-----------------KPEEGR 142
Query: 192 TFAERNN-LSFIETSALDSTNVETAFQNI 219
A R ++E SA V F+
Sbjct: 143 DMANRIGAFGYMECSAKTKDGVREVFEMA 171
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 91.6 bits (226), Expect = 8e-24
Identities = 31/209 (14%), Positives = 59/209 (28%), Gaps = 58/209 (27%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
+++++G GK+ +L + + + T+G T K +K +WD GQ+
Sbjct: 13 MRILMLGLDAAGKTTILYKLKLGQSV-TTIPTVGFNVETV----TYKNVKFNVWDVGGQD 67
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
+ R + YY G G + V D A + +
Sbjct: 68 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQE-------------------------- 101
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL---RHLRAVPAD 188
R + D ++ +I++ NK DL +
Sbjct: 102 ------------------------LHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEK 137
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQ 217
T N + A +
Sbjct: 138 LGLTRIRDRNWYVQPSCATSGDGLYEGLT 166
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 91.3 bits (225), Expect = 1e-23
Identities = 49/221 (22%), Positives = 78/221 (35%), Gaps = 66/221 (29%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQER 72
K+V++GDS GK+ LL F ++ F T+ E T S ++D + I+ +WDT+G
Sbjct: 4 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTV-FENYTASFEIDTQRIELSLWDTSGSPY 62
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYY 132
Y + Y
Sbjct: 63 YDNVR---------------------------------------------------PLSY 71
Query: 133 RGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLR------------ 180
+ L+ +DI++ T ++V + + N ++LVG KSDLR
Sbjct: 72 PDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNH 131
Query: 181 HLRAVPADEAKTFA-ERNNLSFIETSALDSTN-VETAFQNI 219
V D+ A + ++IE SAL S N V F
Sbjct: 132 RQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVA 172
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 89.3 bits (220), Expect = 4e-23
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 54/209 (25%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
FK+VL+GD G GK+ + R EF + +T+GVE ++ IK +WDTAGQE
Sbjct: 4 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 63
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
++ + YY A A++++D+ +TY+NV W R+L
Sbjct: 64 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC------------------ 105
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
+NI I+L GNK D++ +
Sbjct: 106 ----------------------------------ENIPIVLCGNKVDIKDRKVKAKSIV- 130
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNIL 220
F + NL + + SA + N E F +
Sbjct: 131 -FHRKKNLQYYDISAKSNYNFEKPFLWLA 158
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 87.8 bits (216), Expect = 2e-22
Identities = 26/212 (12%), Positives = 54/212 (25%), Gaps = 58/212 (27%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQER 72
+++++G GK+ +L + E T V+ K I +WD GQ++
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEI-----VTTIPTIGFNVETVEYKNISFTVWDVGGQDK 56
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYY 132
R + Y++ G + V D
Sbjct: 57 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREE--------------------------- 89
Query: 133 RGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKS---DLRHLRAVPADE 189
+R L + ++ V+++ NK + + +
Sbjct: 90 -----------------------LMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKL 126
Query: 190 AKTFAERNNLSFIETSALDSTNVETAFQNILT 221
N T A + +
Sbjct: 127 GLHSLRHRNWYIQATCATSGDGLYEGLDWLSN 158
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 87.5 bits (215), Expect = 3e-22
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 52/207 (25%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQER 72
K+V++G+ VGKS+++ R+ + F + K TIGV+F R IQV+ + ++ +WDTAGQE
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 63
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYY 132
+ AIT AYYRGA +LV+ ++E + W ++
Sbjct: 64 FDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVG------------------ 105
Query: 133 RGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKT 192
+I LV NK DL + +EA+
Sbjct: 106 ----------------------------------DIPTALVQNKIDLLDDSCIKNEEAEG 131
Query: 193 FAERNNLSFIETSALDSTNVETAFQNI 219
A+R L F TS + NV F+ +
Sbjct: 132 LAKRLKLRFYRTSVKEDLNVSEVFKYL 158
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 86.3 bits (212), Expect = 6e-22
Identities = 51/210 (24%), Positives = 78/210 (37%), Gaps = 51/210 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
K+ ++G VGKS+L +F +F TI F T+ I V+ + Q+ DTAGQ+
Sbjct: 5 RKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKLITVNGQEYHLQLVDTAGQD 63
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
Y Y G +LVY + ++E ++
Sbjct: 64 EYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVI-------------------------- 97
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
+ L I IMLVGNK DL R + +E K
Sbjct: 98 ------------------------HGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGK 133
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNILT 221
AE N +F+E+SA ++ F+ I+
Sbjct: 134 ALAESWNAAFLESSAKENQTAVDVFRRIIL 163
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 83.1 bits (204), Expect = 1e-20
Identities = 32/212 (15%), Positives = 59/212 (27%), Gaps = 58/212 (27%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
+++++G G GK+ +L R E +K TIG T + K +K +WD GQ
Sbjct: 18 LRILILGLDGAGKTTILYRLQIGEVV-TTKPTIGFNVET----LSYKNLKLNVWDLGGQT 72
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
R YY + V D + L +
Sbjct: 73 SIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQE------------------- 113
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL---RHLRAVPAD 188
Q+ +++ NK D V +
Sbjct: 114 -------------------------------EELQDAALLVFANKQDQPGALSASEVSKE 142
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ + S + +SA+ + ++
Sbjct: 143 LNLVELKDRSWSIVASSAIKGEGITEGLDWLI 174
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 83.1 bits (204), Expect = 2e-20
Identities = 28/234 (11%), Positives = 58/234 (24%), Gaps = 72/234 (30%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
K++L+G GKS + + + T G+ +Q ++ D GQ
Sbjct: 3 LKLLLLGTGESGKSTFIKQMRIIHGS--GVPTTGIIEYPFDLQSVIF----RMVDVGGQR 56
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
R + + + ++++ +
Sbjct: 57 SERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRM---------------------- 94
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
E+ + + QN ++L NK DL + + +
Sbjct: 95 ------------------EESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVD 136
Query: 192 TFAE--------------------------RNNLSFIETSALDSTNVETAFQNI 219
F E + T A D+ N+ F +
Sbjct: 137 YFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAV 190
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 81.3 bits (200), Expect = 2e-19
Identities = 26/228 (11%), Positives = 60/228 (26%), Gaps = 37/228 (16%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
Y +++L+G GKS ++ + T G+ + + ++D
Sbjct: 3 YRATHRLLLLGAGESGKSTIVKQMRILHVV----LTSGIFE----TKFQVDKVNFHMFDV 54
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTY-----------ENVERWLRELRDHADQN 116
GQ R + + V + + E + + + +
Sbjct: 55 GGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRT 114
Query: 117 IVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 176
I ++L + +E + E + G
Sbjct: 115 ISVILFL-------------NKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGED 161
Query: 177 SDLRHLRAVPADEAKTFAERNN-----LSFIETSALDSTNVETAFQNI 219
+ + DE + + T A+D+ N+ F +
Sbjct: 162 PRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDC 209
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 80.1 bits (196), Expect = 2e-19
Identities = 50/210 (23%), Positives = 75/210 (35%), Gaps = 53/210 (25%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
K+ + G +GVGKS L+ RF F E T+ + +D + + +I DTAGQE
Sbjct: 3 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTY-RHQATIDDEVVSMEILDTAGQE 61
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
+ R G +LVYDI ++E V L +
Sbjct: 62 DTI-QREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEI------------------- 101
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
+N+ ++LVGNK+DL H R V +E +
Sbjct: 102 -------------------------------KKPKNVTLILVGNKADLDHSRQVSTEEGE 130
Query: 192 TFAERNNLSFIETSALDST-NVETAFQNIL 220
A +F E SA N+ F +
Sbjct: 131 KLATELACAFYECSACTGEGNITEIFYELC 160
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 79.4 bits (194), Expect = 3e-19
Identities = 47/210 (22%), Positives = 73/210 (34%), Gaps = 52/210 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
+KV+L+G GVGKS L F E ++ RSI VD + ++D Q+
Sbjct: 2 YKVLLLGAPGVGKSALARIFGGVEDG--PEAEAAGHTYDRSIVVDGEEASLMVYDIWEQD 59
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
R + ++VY + ++E
Sbjct: 60 GGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASEL-------------------------- 93
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
++ R ++ I+LVGNKSDL R V DE +
Sbjct: 94 ------------------------RVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEGR 129
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNILT 221
A + FIETSA NV+ F+ ++
Sbjct: 130 ACAVVFDCKFIETSAALHHNVQALFEGVVR 159
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 77.3 bits (189), Expect = 2e-18
Identities = 36/212 (16%), Positives = 65/212 (30%), Gaps = 58/212 (27%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
++ ++GD+ GKS+L+ RF + + E + + VD +T I + AG
Sbjct: 6 LRLGVLGDARSGKSSLIHRFLTGSY--QVLEKTESEQYKKEMLVDGQTHLVLIREEAGAP 63
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
+ + A + V+ + +++ V R
Sbjct: 64 DAK-----FSGWADAVIFVFSLEDENSFQAVSRL-------------------------- 92
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD--LRHLRAVPADE 189
L LR + + LVG + R V
Sbjct: 93 ----------------------HGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGDAR 130
Query: 190 AKTFA-ERNNLSFIETSALDSTNVETAFQNIL 220
A+ + S+ ET A NV+ FQ +
Sbjct: 131 ARALCADMKRCSYYETCATYGLNVDRVFQEVA 162
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 75.4 bits (184), Expect = 9e-18
Identities = 27/213 (12%), Positives = 60/213 (28%), Gaps = 58/213 (27%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
KV+++G GK+ +L +F+ NE + ++ + +WD GQE
Sbjct: 16 HKVIIVGLDNAGKTTILYQFSMNEV-----VHTSPTIGSNVEEIVINNTRFLMWDIGGQE 70
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
R+ + YY ++V D L ++ H
Sbjct: 71 SLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAH------------------- 111
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH---LRAVPAD 188
+ +++ NK D++ + +
Sbjct: 112 -------------------------------EDLRKAGLLIFANKQDVKECMTVAEISQF 140
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNILT 221
T + + AL + + +++
Sbjct: 141 LKLTSIKDHQWHIQACCALTGEGLCQGLEWMMS 173
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 75.1 bits (183), Expect = 1e-17
Identities = 30/205 (14%), Positives = 60/205 (29%), Gaps = 45/205 (21%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQER 72
K++ +G GK+ LL + +T+ + S ++ IK +D G +
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRL-----ATLQPTWHPTSEELAIGNIKFTTFDLGGHIQ 56
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYY 132
R + Y+ G + + D A ++ L L + A+ L P ++
Sbjct: 57 ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAE------LKDVPFVILGNK 110
Query: 133 RGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKT 192
A A+ ++ L N ++
Sbjct: 111 IDAPNAVSEAELRSALGLLNTT----------------------------------GSQR 136
Query: 193 FAERNNLSFIETSALDSTNVETAFQ 217
+ + S + AFQ
Sbjct: 137 IEGQRPVEVFMCSVVMRNGYLEAFQ 161
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 75.8 bits (185), Expect = 1e-17
Identities = 27/234 (11%), Positives = 62/234 (26%), Gaps = 75/234 (32%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
K++L+G GKS ++ + + G+ K + +++D GQ
Sbjct: 3 VKLLLLGAGESGKSTIVKQMKIIHE-----AGTGIVE----THFTFKDLHFKMFDVGGQR 53
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
R + G + ++ + + + +
Sbjct: 54 SERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRM---------------------- 91
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
+E+++ + + + I+L NK DL + +
Sbjct: 92 ------------------HESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTI 133
Query: 192 TFAERN--------------------------NLSFIETSALDSTNVETAFQNI 219
+ E + T A D+ NV+ F +
Sbjct: 134 CYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAV 187
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 75.7 bits (185), Expect = 1e-17
Identities = 32/236 (13%), Positives = 64/236 (27%), Gaps = 74/236 (31%)
Query: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQ 70
L K++L+G GKS L + T G+ + K + ++ D GQ
Sbjct: 2 LVKILLLGAGESGKSTFLKQM---RIIHGQDPTKGIHE----YDFEIKNVPFKMVDVGGQ 54
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRR 130
R + L + ++ +R L +
Sbjct: 55 RSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTES------------------ 96
Query: 131 YYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEA 190
+ + + + N+ I+L NK+DL +
Sbjct: 97 ----------------------LNIFETIVNNRVFSNVSIILFLNKTDLLEEKVQVVSIK 134
Query: 191 KTFAE---------------------------RNNLSFIETSALDSTNVETAFQNI 219
F E + L T+A+++ N+ F+++
Sbjct: 135 DYFLEFEGDPHCLRDVQKFLVECFRGKRRDQQQRPLYHHFTTAINTENIRLVFRDV 190
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 74.0 bits (180), Expect = 3e-17
Identities = 47/214 (21%), Positives = 77/214 (35%), Gaps = 52/214 (24%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESK-STIGVEFATRSIQVDQKTIKAQIWDT 67
+ ++VVLIG+ GVGKS L + F +++S +G + R++ VD ++ + D
Sbjct: 1 NTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDM 60
Query: 68 A-GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPS 126
+ + + L+VY I ++E +LR + +
Sbjct: 61 WENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPI------ 114
Query: 127 LLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 186
+LVGNKSDL R V
Sbjct: 115 --------------------------------------------ILVGNKSDLVRCREVS 130
Query: 187 ADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
E + A + FIETSA NV+ F+ I+
Sbjct: 131 VSEGRACAVVFDCKFIETSAAVQHNVKELFEGIV 164
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 73.6 bits (179), Expect = 4e-17
Identities = 28/209 (13%), Positives = 58/209 (27%), Gaps = 52/209 (24%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
+++++G GK+ +L +F + TI ++ + K IWD GQ+
Sbjct: 3 LRLLMLGLDNAGKTTILKKFNGEDV-----DTISPTLGFNIKTLEHRGFKLNIWDVGGQK 57
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
R+ Y+ G + V D A ++ +R L+
Sbjct: 58 SLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQS----------------------- 94
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
L E R ++ + A+
Sbjct: 95 ------------------------LLVEERLAGATLLIFANKQDLPGALSCNAIQEALEL 130
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNIL 220
++ SA+ ++ +L
Sbjct: 131 DSIRSHHWRIQGCSAVTGEDLLPGIDWLL 159
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 72.0 bits (175), Expect = 1e-16
Identities = 33/212 (15%), Positives = 68/212 (32%), Gaps = 57/212 (26%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
++ L+G GK+ ++ +FN + T+G ++ + + ++WD GQ
Sbjct: 3 MELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNM----RKITKGNVTIKLWDIGGQP 58
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
R+R++ Y RG + + D A E + L L D
Sbjct: 59 RFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQ----------------- 101
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL---RHLRAVPAD 188
Q I ++++GNK DL + +
Sbjct: 102 ---------------------------------LQGIPVLVLGNKRDLPGALDEKELIEK 128
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ + + S + N++ Q ++
Sbjct: 129 MNLSAIQDREICCYSISCKEKDNIDITLQWLI 160
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 71.5 bits (174), Expect = 3e-16
Identities = 31/215 (14%), Positives = 58/215 (26%), Gaps = 58/215 (26%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
D +++L+G GK+ LL + + + + T G + + K +WD
Sbjct: 14 DQEVRILLLGLDNAGKTTLLKQLASEDISHITP-TQGFNIKSV----QSQGFKLNVWDIG 68
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
GQ + R +Y+ + V D A +E + L EL + +
Sbjct: 69 GQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLS------------ 116
Query: 129 RRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL---RHLRAV 185
+ +++ NK DL +
Sbjct: 117 --------------------------------------CVPVLIFANKQDLLTAAPASEI 138
Query: 186 PADEAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
SAL V+ +
Sbjct: 139 AEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVC 173
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 64.7 bits (156), Expect = 8e-14
Identities = 29/212 (13%), Positives = 56/212 (26%), Gaps = 58/212 (27%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
+++++G G GK+ +L R E T V K +K Q+WD G
Sbjct: 6 MRILILGLDGAGKTTILYRLQVGEV-----VTTIPTIGFNVETVTYKNLKFQVWDLGGLT 60
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
R YY + V D + L + +
Sbjct: 61 SIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEE------------------- 101
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDL---RHLRAVPAD 188
+ ++++ NK D+ +
Sbjct: 102 -------------------------------EELRKAILVVFANKQDMEQAMTSSEMANS 130
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ +TSA T ++ A + ++
Sbjct: 131 LGLPALKDRKWQIFKTSATKGTGLDEAMEWLV 162
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 61.3 bits (147), Expect = 3e-12
Identities = 29/212 (13%), Positives = 49/212 (23%), Gaps = 40/212 (18%)
Query: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
Y K+V +G GK+ LL + S ++ + +D
Sbjct: 10 YKKTGKLVFLGLDNAGKTTLLHMLKDDRLG-----QHVPTLHPTSEELTIAGMTFTTFDL 64
Query: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSL 127
G + R + Y G + + D A H + L L V +L
Sbjct: 65 GGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPIL------ 118
Query: 128 LRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPA 187
I + LR+ G+
Sbjct: 119 ----------------ILGNKIDRPEAISEERLREMFGLYGQTTGKGS------------ 150
Query: 188 DEAKTFAERNNLSFIETSALDSTNVETAFQNI 219
+ L S L F+ +
Sbjct: 151 -VSLKELNARPLEVFMCSVLKRQGYGEGFRWM 181
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 56.2 bits (134), Expect = 2e-10
Identities = 20/209 (9%), Positives = 58/209 (27%), Gaps = 50/209 (23%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQER 72
V+ +G GK+ L R ++ +++++I A + ++ I +
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLTGQYR-DTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESL 60
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYY 132
+ + A + V D +R ++++ +
Sbjct: 61 RFQLLDRFKSSARAVVFVVDS------AAFQREVKDVAEF-------------------- 94
Query: 133 RGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAKT 192
+ + +++ NK D+ A A +
Sbjct: 95 ---------------------LYQVLIDSMALKNSPSLLIACNKQDI--AMAKSAKLIQQ 131
Query: 193 FAERNNLSFIETSALDSTNVETAFQNILT 221
E+ + T + + ++++
Sbjct: 132 QLEKELNTLRVTRSAAPSTLDSSSTAPAQ 160
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 45.9 bits (108), Expect = 1e-06
Identities = 16/113 (14%), Positives = 31/113 (27%), Gaps = 4/113 (3%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQI--WDTAG 69
V + G++G GKS+ ++ E + GV T + + WD G
Sbjct: 57 LNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPG 116
Query: 70 QERYRAITSAYYR--GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
Y I+ +N + + + +
Sbjct: 117 IGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMMKKEFYFVR 169
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 45.4 bits (106), Expect = 1e-06
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 11/111 (9%)
Query: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
Y +++ G GK++LL+ T + + T+ + + D + + D G
Sbjct: 2 YQPSIIIAGPQNSGKTSLLTLLTTDSV----RPTVVSQEPLSAADYDGSGV--TLVDFPG 55
Query: 70 QERYRAITSAYYRGAVGA-----LLVYDIAKHLTYENVERWLRELRDHADQ 115
+ R S Y + +V +L ++ +
Sbjct: 56 HVKLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITES 106
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 42.8 bits (99), Expect = 6e-06
Identities = 32/208 (15%), Positives = 53/208 (25%), Gaps = 52/208 (25%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
KVV+ G GKS+LL+ E + + G + + I DTAG
Sbjct: 2 MKVVIAGRPNAGKSSLLNALAGREAAIVTD-IAGTTRDVLREHIHIDGMPLHIIDTAGLR 60
Query: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRY 131
+ +ER +E+
Sbjct: 61 EAS--------------------DEVERIGIERAWQEIEQADRVL--------------- 85
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPADEAK 191
+ E + I +V NK+D+ E
Sbjct: 86 ---------FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADI-------TGETL 129
Query: 192 TFAERNNLSFIETSALDSTNVETAFQNI 219
+E N + I SA V+ ++
Sbjct: 130 GMSEVNGHALIRLSARTGEGVDVLRNHL 157
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 36.9 bits (84), Expect = 6e-04
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 3/110 (2%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG--Q 70
++V++G VGKS LL+R + + + G S ++ + I +I DTAG
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTD-IPGTTRDVISEEIVIRGILFRIVDTAGVRS 60
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 120
E + + + DI + + + +
Sbjct: 61 ETNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNKRY 110
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 36.3 bits (82), Expect = 0.001
Identities = 13/73 (17%), Positives = 22/73 (30%)
Query: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
D +V G S GKS+ L+ T + + T G +V +
Sbjct: 14 DTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYG 73
Query: 69 GQERYRAITSAYY 81
E + +
Sbjct: 74 YAEVPEEMKRKWQ 86
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 36.2 bits (82), Expect = 0.001
Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQE 71
KV ++G VGKS L + E L S G +V K DTAG
Sbjct: 9 IKVAIVGRPNVGKSTLFNAILNKERALVSP-IPGTTRDPVDDEVFIDGRKYVFVDTAGLR 67
Query: 72 RYRAITSAYY 81
R +
Sbjct: 68 RKSRVEPRTV 77
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 35.5 bits (80), Expect = 0.002
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESK 41
V ++G VGKS LL+ + S
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVKVAPISP 35
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle
domain {Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 34.2 bits (77), Expect = 0.006
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
V L+G GKS+LL+ TR + + ++V ++ + + D G
Sbjct: 4 VGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEE-RFTLADIPG 58
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 33.9 bits (76), Expect = 0.007
Identities = 33/212 (15%), Positives = 58/212 (27%), Gaps = 41/212 (19%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
++ G S VGKS L+ R T K G ++ + +I D G
Sbjct: 3 IIFAGRSNVGKSTLIYRLTG------KKVRRGKRPGVTRKIIEIEWKNHKIIDMPGFGFM 56
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
+ + E V ++ +V+ P
Sbjct: 57 MGLPKEVQE-------------RIKDEIVHFIEDNAKNIDVAVLVVDGKAAP-------- 95
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDHA-DQNIVIMLVGNKSDL----RHLRAVPAD 188
+I K E + +I ++ NK D + + A+
Sbjct: 96 ---------EIIKRWEKRGEIPIDVEFYQFLRELDIPTIVAVNKLDKIKNVQEVINFLAE 146
Query: 189 EAKTFAERNNLSFIETSALDSTNVETAFQNIL 220
+ + + FI SA N+E I
Sbjct: 147 KFEVPLSEIDKVFIPISAKFGDNIERLKNRIF 178
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 33.6 bits (75), Expect = 0.011
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESK 41
V+++G VGKS L ++ + + +
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKKKAIVED 30
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 32.1 bits (72), Expect = 0.043
Identities = 15/115 (13%), Positives = 35/115 (30%), Gaps = 10/115 (8%)
Query: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG-- 69
++++G GVGKS+ ++ + + + I DT G
Sbjct: 33 LTILVMGKGGVGKSSTVNSIIGER-VVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLI 91
Query: 70 -----QERYRAITSAYY--RGAVGALLVYDIAKHLTYENVERWLRELRDHADQNI 117
+ I ++ + L V + + + + + D + I
Sbjct: 92 EGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGI 146
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 31.6 bits (70), Expect = 0.046
Identities = 9/54 (16%), Positives = 20/54 (37%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDT 67
+ ++G VGKS LL++ + ++ S+ I + +
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTP 61
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 31.3 bits (69), Expect = 0.066
Identities = 10/59 (16%), Positives = 21/59 (35%)
Query: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG 69
L ++ L G S VGKS+ ++ + + S G ++ + +
Sbjct: 23 LPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGF 81
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 30.7 bits (68), Expect = 0.078
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQER 72
K+++ G+ GVGK+ L+ + K IG +K +I T G+++
Sbjct: 2 KIIITGEPGVGKTTLVKKIVE----RLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKK 57
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLTYEN 101
+ + VG+ V
Sbjct: 58 IFSSKFFTSKKLVGSYGVNVQYFEELAIP 86
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 31.4 bits (70), Expect = 0.082
Identities = 35/211 (16%), Positives = 64/211 (30%), Gaps = 18/211 (8%)
Query: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
+ L ++ ++G GKS++L F +F L S I V+ T A+
Sbjct: 21 NADLDLPQIAVVGGQSAGKSSVLENFVGRDF-LPRGSGIVTRRPLVLQLVNSTTEYAEFL 79
Query: 66 DTAG------QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVI 119
G +E I + R + + +L + L D V
Sbjct: 80 HCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVP 139
Query: 120 MLVGPP-------SLLRRY-YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 171
+ PP +L ++ + L V L + + +E+ + +
Sbjct: 140 VGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKIAKEVDPQGQR---TI 196
Query: 172 LVGNKSDLRHLRAVPADEAKTFAERNNLSFI 202
V K DL D + +I
Sbjct: 197 GVITKLDLMDEGTDARDVLENKLLPLRRGYI 227
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 30.3 bits (67), Expect = 0.13
Identities = 27/208 (12%), Positives = 57/208 (27%), Gaps = 26/208 (12%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
VV +G +G GK+ L F R LE + + +D + ++ + R
Sbjct: 3 VVFVGTAGSGKTTLTGEFGR---YLEDNYKVAY------VNLDTGVKELP-YEPSIDVRE 52
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
R G + E +L ++ +N +++ P + +
Sbjct: 53 FVTVEEIMREGYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQMETFLFH 112
Query: 134 ----------GAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVG-NKSDLRHL 182
+ + D + + + NK DL
Sbjct: 113 EFGVRLMENLPYPLVVYISDPEILKKPNDYCFVRFFALLIDLRLGATTIPALNKVDL--- 169
Query: 183 RAVPADEAKTFAERNNLSFIETSALDST 210
+ +E + + T+ L
Sbjct: 170 --LSEEEKERHRKYFEDIDYLTARLKLD 195
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 29.3 bits (64), Expect = 0.25
Identities = 19/155 (12%), Positives = 44/155 (28%), Gaps = 12/155 (7%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
++ IG G GKS F + + + + + + + +
Sbjct: 5 ILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGMQ 64
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL--RRY 131
+ G V +L E W +++ + + P + L R
Sbjct: 65 FDTAKSILYGGDSVKGVIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVPWTELVKRNS 124
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQ 166
RG K + + + + +R++
Sbjct: 125 KRG----------TKAVPIDVLRSMYKSMREYLGL 149
>d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia
coli [TaxId: 562]}
Length = 936
Score = 29.7 bits (66), Expect = 0.27
Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 18/101 (17%)
Query: 124 PPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 183
SLL++ R + L AK +T ++ + L+ I ++R +
Sbjct: 149 RRSLLQKNAR--IRNCLTQLNAKDITDDDKQELDEALQR------EIQAAFRTDEIRRAQ 200
Query: 184 AVPADEAKTFAERNNLSFIETSALDSTN-----VETAFQNI 219
P E R +S+I + V+TA +NI
Sbjct: 201 PTPQAEM-----RYGMSYIHETVWKGVPKFLRRVDTALKNI 236
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 28.8 bits (63), Expect = 0.33
Identities = 15/150 (10%), Positives = 33/150 (22%), Gaps = 19/150 (12%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
++L G S GKS ++ + ++ +
Sbjct: 6 IILNGGSSAGKSGIVRCLQS-------------VLPEPWLAFGVDSLIEAMPLKMQSAEG 52
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
A + + + + I+ + + + +R
Sbjct: 53 GIEFDADGG------VSIGPEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWR 106
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDH 163
VG L V + E D
Sbjct: 107 SFVGDLDVLWVGVRCDGAVAEGRETARGDR 136
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle
domain {Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 29.1 bits (64), Expect = 0.33
Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
V L+G VGKS LLS + + + + ++ D + D G
Sbjct: 4 VGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGR-SFVMADLPGLIEG 62
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 29.2 bits (64), Expect = 0.34
Identities = 16/120 (13%), Positives = 32/120 (26%), Gaps = 1/120 (0%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
L+ G GKS L + +G I + + I
Sbjct: 32 GALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLHALGA 91
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
+++ + LL+ + L W L+ A+ +++L
Sbjct: 92 H-LSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLKRAAEGRRLMVLDTLRRFHIEEEN 150
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 29.3 bits (64), Expect = 0.36
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 5/36 (13%)
Query: 4 REDEYDYLFK-----VVLIGDSGVGKSNLLSRFTRN 34
RE E + L +++G GKS+++
Sbjct: 17 REKEIEKLKGLRAPITLVLGLRRTGKSSIIKIGINE 52
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 28.6 bits (63), Expect = 0.54
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQ 70
L ++V++G GKS++L +F G TR + Q T D +
Sbjct: 24 LPQIVVVGSQSSGKSSVLENIVGRDFL-----PRGSGIVTRRPLILQLTHLPIADDGSQT 78
Query: 71 ERYRAI 76
+ +
Sbjct: 79 QEWGEF 84
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 28.0 bits (61), Expect = 0.64
Identities = 19/167 (11%), Positives = 47/167 (28%), Gaps = 17/167 (10%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQER 72
+++ G G GK+++ + G + V + +
Sbjct: 7 NILITGTPGTGKTSMAEMI--------AAELDGFQHLEVGKLVKENHFYTEYDTELDTHI 58
Query: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIML-VGPPSLLRRY 131
+ ++V + Y + EL ++V++L L R
Sbjct: 59 IEEKDEDRLLDFMEPIMVSRGNHVVDYHS-----SELFPERWFHMVVVLHTSTEVLFERL 113
Query: 132 YRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 178
+ + + E RD + +IV++ + +
Sbjct: 114 TKRQYSEAKRAENMEAEIQCIC---EEEARDAYEDDIVLVRENDTLE 157
>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 209
Score = 28.0 bits (62), Expect = 0.73
Identities = 34/215 (15%), Positives = 63/215 (29%), Gaps = 49/215 (22%)
Query: 4 REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI-QVDQKTIKA 62
E K+ ++G G G +N ++R G + + KA
Sbjct: 8 LEYLQQTKAKITVVGCGGAG-NNTITRLKMEGIE-------GAKTVAINTDAQQLIRTKA 59
Query: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 122
+ + +GA I + E+ E ++D ++V +
Sbjct: 60 D---------KKILIGKKLTRGLGAGGNPKIGEEAAKESAEEIKAAIQDS---DMVFITC 107
Query: 123 GP------------PSLLRRYYRGAVGALLVYDIAKHLTYENVERW------LRELRDHA 164
G + ++ GAL V + E R L L+ H
Sbjct: 108 GLGGGTGTGSAPVVAEISKKI-----GALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHT 162
Query: 165 DQNIVIMLVGNKSDLRHLRAVPADEAKTFAERNNL 199
D +VI N+ + +P A F + +
Sbjct: 163 DTLVVIP---NEKLFEIVPNMPLKLA--FKVADEV 192
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 27.8 bits (60), Expect = 0.93
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 15 VLIGDSGVGKSNLL 28
++IG +G GKS+LL
Sbjct: 27 LIIGQNGSGKSSLL 40
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 27.9 bits (60), Expect = 1.0
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 15 VLIGDSGVGKSNLL 28
++IG +G GKS+LL
Sbjct: 27 LIIGQNGSGKSSLL 40
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 27.4 bits (60), Expect = 1.3
Identities = 18/108 (16%), Positives = 34/108 (31%), Gaps = 9/108 (8%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAG---Q 70
++G SG GK+ + L+ ST + F R + + K I G Q
Sbjct: 34 FGILGPSGAGKTTFMRIIAG----LDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQ 89
Query: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLR--ELRDHADQN 116
+ L ++K + VE + ++ +
Sbjct: 90 TWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHF 137
>d1lrza2 d.108.1.4 (A:1-165) Methicillin resistance protein FemA
{Staphylococcus aureus [TaxId: 1280]}
Length = 165
Score = 26.8 bits (59), Expect = 1.5
Identities = 5/40 (12%), Positives = 13/40 (32%), Gaps = 1/40 (2%)
Query: 93 IAKHLTYENVERWLRELRDHA-DQNIVIMLVGPPSLLRRY 131
+ + E V + EL + + + + P +
Sbjct: 77 VIDYENQELVHFFFNELSKYVKKHRCLYLHIDPYLPYQYL 116
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 26.8 bits (59), Expect = 2.1
Identities = 28/176 (15%), Positives = 49/176 (27%), Gaps = 31/176 (17%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
V LIG +G GK+ LS L + F + I + ++ E
Sbjct: 35 VTLIGANGAGKTTTLSAIAG----LVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGR 90
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRE---LRDHADQN-------------I 117
R + K ++E L++ Q I
Sbjct: 91 RIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQMLAI 150
Query: 118 VIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLV 173
L+ P L L++ + + L V ++ + I+LV
Sbjct: 151 GRALMSRPKL-----------LMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLV 195
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 26.5 bits (57), Expect = 2.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLE 39
VVL G S VGKS ++ NL
Sbjct: 5 VVLSGPSAVGKSTVVRCLRERIPNLH 30
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import
ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 240
Score = 26.5 bits (58), Expect = 2.1
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 14 VVLIGDSGVGKSNLL 28
VL+G +G GKS L
Sbjct: 27 CVLLGPTGAGKSVFL 41
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 26.4 bits (57), Expect = 2.5
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 14 VVLIGDSGVGKSNLLSR 30
VVL G SG GKS LL +
Sbjct: 3 VVLSGPSGAGKSTLLKK 19
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 26.4 bits (57), Expect = 2.5
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 14 VVLIGDSGVGKSNLLSR 30
+VL+G GVG+ ++ +
Sbjct: 6 LVLLGAHGVGRRHIKNT 22
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 26.2 bits (58), Expect = 2.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRN 34
K+ L G +GVGK+ L+ N
Sbjct: 70 KIGLFGGAGVGKTVLIMELINN 91
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 26.1 bits (57), Expect = 2.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 14 VVLIGDSGVGKSNLLSRF 31
V+L G SG+GKS
Sbjct: 18 VLLTGRSGIGKSECALDL 35
>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase
{Leishmania major [TaxId: 5664]}
Length = 139
Score = 25.9 bits (56), Expect = 2.9
Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 8/107 (7%)
Query: 55 VDQKTIKAQIWDTAGQERYRAITSAYYRG-----AVGALLVYDIAKHLTYENVERWLREL 109
VD+ +A I D +R+ + Y GA + + +T + + E
Sbjct: 6 VDEIPPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEE 65
Query: 110 RDHADQNIVIMLVGPPSLLRR---YYRGAVGALLVYDIAKHLTYENV 153
+ V+ G + L V A + + HL +
Sbjct: 66 EIRHNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHP 112
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 26.1 bits (56), Expect = 3.0
Identities = 32/216 (14%), Positives = 66/216 (30%), Gaps = 39/216 (18%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
+ ++G GK+ L+ T ++ E R + + + I ++
Sbjct: 11 IGVVGHVDHGKTTLVQAITG------IWTSKHSEELKRGMTIKLGYAETNIGVCESCKKP 64
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLLRRYYR 133
A K ++ ++LR + I G
Sbjct: 65 EAYV------------TEPSCKSCGSDDEPKFLRRIS-------FIDAPGH----EVLMA 101
Query: 134 GAVGALLVYDIAKHLTYENVERWLRELRDH-----ADQNIVIMLVGNKSDL--RHLRAVP 186
+ + D A + N + R+H +++V NK D+ +
Sbjct: 102 TMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQ 161
Query: 187 ADEAKTFAER---NNLSFIETSALDSTNVETAFQNI 219
+ K F + N+ I SAL N+++ + I
Sbjct: 162 YRQIKQFTKGTWAENVPIIPVSALHKINIDSLIEGI 197
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 26.0 bits (56), Expect = 3.1
Identities = 9/52 (17%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIW 65
++ SG GKS+L+ + + +++ + V TR + + + +
Sbjct: 5 YIVSAPSGAGKSSLIQALLKTQPLYDTQ--VSVSHTTRQPRPGEVHGEHYFF 54
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 25.7 bits (56), Expect = 3.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNL 38
V++ GDSG+GKS + L
Sbjct: 18 VLITGDSGIGKSETALELIKRGHRL 42
>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima
[TaxId: 2336]}
Length = 210
Score = 26.1 bits (57), Expect = 3.5
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 10/53 (18%)
Query: 102 VERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVE 154
++ L +RD +N P R R + LL Y+ +HL E VE
Sbjct: 13 IKHKLTIMRD---KNT------GPKEFRELLR-EITLLLAYEATRHLKCEEVE 55
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 25.8 bits (56), Expect = 3.6
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 14 VVLIGDSGVGKSNLL 28
V++G +G GK+ L
Sbjct: 29 FVILGPTGAGKTLFL 43
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 26.1 bits (57), Expect = 3.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 14 VVLIGDSGVGKSNLL 28
VV +G SG GKS LL
Sbjct: 29 VVFVGPSGCGKSTLL 43
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 25.7 bits (55), Expect = 3.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 14 VVLIGDSGVGKSNLLSR 30
+V+ G SG GKS LL +
Sbjct: 4 IVISGPSGTGKSTLLKK 20
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 25.6 bits (56), Expect = 3.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNL 38
V++ GDSGVGKS + L
Sbjct: 17 VLITGDSGVGKSETALELVQRGHRL 41
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 25.7 bits (56), Expect = 4.0
Identities = 28/197 (14%), Positives = 56/197 (28%), Gaps = 34/197 (17%)
Query: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTAGQERY 73
LIG +G GK+ L + L S+ V +++ + ++ I +
Sbjct: 31 FGLIGPNGAGKTTTLRIIST----LIKPSSGIVTVFGKNVVEEPHEVRKLISYLPEEAGA 86
Query: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLR--ELRDHADQNI-------------- 117
A Y + E VER L + +
Sbjct: 87 YRNMQGIEYLRFVAGF-YASSSSEIEEMVERATEIAGLGEKIKDRVSTYSKGMVRKLLIA 145
Query: 118 VIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYEN--------VERWLRELRDHADQNIV 169
++V P + + L ++ K L + + E+ D+ +
Sbjct: 146 RALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNMLEVEFLCDRIAL 205
Query: 170 -----IMLVGNKSDLRH 181
I+ G +L+
Sbjct: 206 IHNGTIVETGTVEELKE 222
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 26.2 bits (57), Expect = 4.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 14 VVLIGDSGVGKS 25
VLIG+ GVGK+
Sbjct: 46 PVLIGEPGVGKT 57
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 25.7 bits (56), Expect = 4.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 14 VVLIGDSGVGKSNLL 28
++L+G SG GK+ L
Sbjct: 32 MILLGPSGCGKTTTL 46
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 25.7 bits (56), Expect = 4.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 14 VVLIGDSGVGKSNLLSRFTR 33
+ L+G +G GKS LL+R
Sbjct: 28 LHLVGPNGAGKSTLLARMAG 47
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 25.6 bits (56), Expect = 4.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 13 KVVLIGDSGVGKSNLLS 29
+ + G +G GK++LL
Sbjct: 64 MLAITGSTGSGKTSLLM 80
>d1jiha1 d.240.1.1 (A:390-509) DNA polymerase eta {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 120
Score = 24.8 bits (54), Expect = 4.8
Identities = 3/44 (6%), Positives = 14/44 (31%)
Query: 57 QKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYE 100
+T+ + + + ++ AY + + + +
Sbjct: 51 PRTVSISLKTKSYEVYRKSGPVAYKGINFQSHELLKVGIKFVTD 94
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1
ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Length = 285
Score = 25.5 bits (56), Expect = 5.0
Identities = 8/47 (17%), Positives = 19/47 (40%)
Query: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKT 59
+ ++IGD GK+++ N+ + + + + QK
Sbjct: 70 RELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKR 116
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima
[TaxId: 2336]}
Length = 308
Score = 25.8 bits (55), Expect = 5.2
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 15 VLIGDSGVGKSNLL 28
++G +G GKSN++
Sbjct: 28 AIVGPNGSGKSNII 41
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 25.3 bits (54), Expect = 5.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 13 KVVLIGDSGVGKSNL 27
K VL+G G GKS +
Sbjct: 3 KAVLVGLPGSGKSTI 17
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022,
N-terminal domain {Pyrococcus horikoshii [TaxId:
53953]}
Length = 239
Score = 25.5 bits (56), Expect = 5.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 14 VVLIGDSGVGKSNLL 28
+VL+G SG GK+ L
Sbjct: 35 LVLLGPSGCGKTTTL 49
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 25.2 bits (55), Expect = 5.8
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 13 KVVLIGDSGVGKSNLLS 29
+ G SG GKS + S
Sbjct: 30 IIAFAGPSGGGKSTIFS 46
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 25.3 bits (54), Expect = 6.0
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 15 VLIGDSGVGKSNLL 28
++G +G GKSN+
Sbjct: 30 AIVGANGSGKSNIG 43
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 25.1 bits (55), Expect = 6.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 13 KVVLIGDSGVGKSNLLS 29
V +G SG GKS L++
Sbjct: 46 TVAFVGMSGGGKSTLIN 62
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 25.2 bits (55), Expect = 6.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 14 VVLIGDSGVGKSNLLS 29
+ +IG SG GKS L
Sbjct: 31 ISIIGSSGSGKSTFLR 46
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 25.4 bits (54), Expect = 7.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 15 VLIGDSGVGKSNLL 28
+IG +G GKSN++
Sbjct: 29 SIIGPNGSGKSNMM 42
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 25.2 bits (55), Expect = 7.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 14 VVLIGDSGVGKSNLLSRFTR 33
V ++G SG GKS +L+
Sbjct: 34 VSIMGPSGSGKSTMLNIIGC 53
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 24.8 bits (54), Expect = 7.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 14 VVLIGDSGVGKSNLLSRFTR 33
+IG SG GKS L+
Sbjct: 34 YGVIGASGAGKSTLIRCVNL 53
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 24.9 bits (54), Expect = 7.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 14 VVLIGDSGVGKSNLL 28
++IG +G GKS L+
Sbjct: 33 TLIIGPNGSGKSTLI 47
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 24.8 bits (53), Expect = 7.9
Identities = 7/50 (14%), Positives = 15/50 (30%), Gaps = 2/50 (4%)
Query: 13 KVVLI-GDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKTIK 61
V + G GK+ L+ ++ E V+ + +
Sbjct: 2 NVWQVVGYKHSGKTTLMEKWVA-AAVREGWRVGTVKHHGHGGEPARPEGV 50
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Thermus thermophilus [TaxId:
274]}
Length = 204
Score = 24.9 bits (54), Expect = 8.2
Identities = 18/94 (19%), Positives = 26/94 (27%), Gaps = 15/94 (15%)
Query: 14 VVLIGDSGVGKSNLLSRFT--------RNEFNLESKSTIGVEFATRSIQVDQKTIKAQ-- 63
V IG GK+ L + T E E R I ++ ++ +
Sbjct: 6 VGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETA 65
Query: 64 -----IWDTAGQERYRAITSAYYRGAVGALLVYD 92
D G Y GA+LV
Sbjct: 66 KRHYSHVDCPGHADYIKNMITGAAQMDGAILVVS 99
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus
[TaxId: 1394]}
Length = 208
Score = 24.9 bits (54), Expect = 8.9
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 10/53 (18%)
Query: 102 VERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVE 154
++ L +RD +N R V L+ ++I + L E VE
Sbjct: 11 IQHKLTYIRD---KNT------GTKEFRELVD-EVATLMAFEITRDLPLEEVE 53
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 24.9 bits (54), Expect = 9.2
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 13 KVVLIGDSGVGKSNLLS 29
L+G +G GKS + +
Sbjct: 42 VTALVGPNGSGKSTVAA 58
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase,
BchI {Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 24.9 bits (53), Expect = 9.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 14 VVLIGDSGVGKSNLLSRF 31
V++ GD G GKS +
Sbjct: 31 VLVFGDRGTGKSTAVRAL 48
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus
faecalis [TaxId: 1351]}
Length = 195
Score = 24.7 bits (52), Expect = 9.7
Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 8/144 (5%)
Query: 13 KVVLIGDS---GVGKSNLLSRFT-RNEFNLESKSTIGVEFATRSIQVDQKTIKAQIWDTA 68
K+VL GDS G + + ++ + V + D + +
Sbjct: 3 KIVLFGDSITAGYLDEAVSPVLVDLVKRDIAAMGLEEVAVINAGMPGDTTEDGLKRLNKE 62
Query: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGPPSLL 128
+ GA A L +I EN+E + E+ + ++++
Sbjct: 63 VLIEKPDEVV-IFFGANDASLDRNITVATFRENLETMIHEIG---SEKVILITPPYADSG 118
Query: 129 RRYYRGAVGALLVYDIAKHLTYEN 152
RR R + +A+ + +
Sbjct: 119 RRPERPQTRIKELVKVAQEVGAAH 142
>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus
[TaxId: 274]}
Length = 208
Score = 24.5 bits (53), Expect = 9.9
Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 10/53 (18%)
Query: 102 VERWLRELRDHADQNIVIMLVGPPSLLRRYYRGAVGALLVYDIAKHLTYENVE 154
V+ L LRD + P R V L+ Y+ + L E
Sbjct: 11 VQHKLAHLRD---KRT------GPKDFRELAE-EVAMLMAYEAMRDLELEETT 53
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.135 0.384
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 792,963
Number of extensions: 35463
Number of successful extensions: 398
Number of sequences better than 10.0: 1
Number of HSP's gapped: 378
Number of HSP's successfully gapped: 204
Length of query: 223
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 141
Effective length of database: 1,281,736
Effective search space: 180724776
Effective search space used: 180724776
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.2 bits)