BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15627
(77 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q29466|VPP1_BOVIN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus
GN=ATP6V0A1 PE=2 SV=1
Length = 838
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/39 (71%), Positives = 30/39 (76%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|Q9I8D0|VPP1_CHICK V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus
GN=ATP6V0A1 PE=1 SV=1
Length = 838
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/39 (71%), Positives = 30/39 (76%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|A1A5G6|VPP1_XENTR V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus
tropicalis GN=atp6v0a1 PE=2 SV=1
Length = 837
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/39 (71%), Positives = 30/39 (76%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|Q93050|VPP1_HUMAN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens
GN=ATP6V0A1 PE=1 SV=3
Length = 837
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/39 (71%), Positives = 30/39 (76%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|Q8AVM5|VPP1_XENLA V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus
laevis GN=atp6v0a1 PE=2 SV=1
Length = 831
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/39 (71%), Positives = 30/39 (76%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|Q5R422|VPP1_PONAB V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii
GN=ATP6V0A1 PE=2 SV=1
Length = 837
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/39 (71%), Positives = 30/39 (76%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|Q9Z1G4|VPP1_MOUSE V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus
GN=Atp6v0a1 PE=1 SV=3
Length = 839
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/39 (71%), Positives = 30/39 (76%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRD 39
>sp|P25286|VPP1_RAT V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus
norvegicus GN=Atp6v0a1 PE=2 SV=1
Length = 838
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/39 (69%), Positives = 29/39 (74%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
MG +FRSEEM L QLF+Q EAAY VS L E G VQFRD
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELEELGKVQFRD 39
>sp|Q13488|VPP3_HUMAN V-type proton ATPase 116 kDa subunit a isoform 3 OS=Homo sapiens
GN=TCIRG1 PE=1 SV=3
Length = 830
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 32/39 (82%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
MG+MFRSEE+AL QLF+ AAY+ VS LGE G+V+FRD
Sbjct: 1 MGSMFRSEEVALVQLFLPTAAAYTCVSRLGELGLVEFRD 39
>sp|Q9HBG4|VPP4_HUMAN V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens
GN=ATP6V0A4 PE=1 SV=2
Length = 840
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
M ++FRSEEM L QLF+Q EAAY V+ LGE G+VQF+D
Sbjct: 1 MVSVFRSEEMCLSQLFLQVEAAYCCVAELGELGLVQFKD 39
>sp|Q920R6|VPP4_MOUSE V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus
GN=Atp6v0a4 PE=2 SV=1
Length = 833
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
M ++FRSEEM L Q+F+Q EAAY V+ LGE G+VQF+D
Sbjct: 1 MASVFRSEEMCLSQVFLQVEAAYCCVAELGELGLVQFKD 39
>sp|Q9Y487|VPP2_HUMAN V-type proton ATPase 116 kDa subunit a isoform 2 OS=Homo sapiens
GN=ATP6V0A2 PE=1 SV=2
Length = 856
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
MG++FRSE M L QLF+Q AY +S LGE G+VQFRD
Sbjct: 1 MGSLFRSETMCLAQLFLQSGTAYECLSALGEKGLVQFRD 39
>sp|P15920|VPP2_MOUSE V-type proton ATPase 116 kDa subunit a isoform 2 OS=Mus musculus
GN=Atp6v0a2 PE=1 SV=2
Length = 856
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
MG++FRSE M L QLF+Q AY +S LGE G+VQFRD
Sbjct: 1 MGSLFRSESMCLAQLFLQSGTAYECLSALGEKGLVQFRD 39
>sp|O97681|VPP2_BOVIN V-type proton ATPase 116 kDa subunit a isoform 2 OS=Bos taurus
GN=ATP6V0A2 PE=2 SV=1
Length = 854
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
MG++FRSE M L QLF+Q AY +S LGE G+V+FRD
Sbjct: 1 MGSLFRSETMCLAQLFLQSGTAYECLSVLGEKGLVEFRD 39
>sp|P30628|VPP1_CAEEL Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis
elegans GN=unc-32 PE=2 SV=3
Length = 905
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 3 AMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
++RSE+M L QL++Q +A+Y V+ LGE G+VQFRD
Sbjct: 15 GIYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRD 51
>sp|P32563|VPH1_YEAST V-type proton ATPase subunit a, vacuolar isoform OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPH1 PE=1
SV=3
Length = 840
Score = 46.2 bits (108), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 3 AMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
A+FRS EMAL Q +I E + S TLG+ G+VQFRD
Sbjct: 7 AIFRSAEMALVQFYIPQEISRDSAYTLGQLGLVQFRD 43
>sp|Q8RWZ7|VHAA1_ARATH Vacuolar proton ATPase a1 OS=Arabidopsis thaliana GN=VHA-a1 PE=1
SV=1
Length = 817
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 4 MFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
+ RSE+M L QL I E+A+ S++ LGE G++QFRD
Sbjct: 13 LMRSEKMTLVQLIIPVESAHRSITYLGELGLLQFRD 48
>sp|Q54E04|VATM_DICDI Vacuolar proton translocating ATPase 100 kDa subunit
OS=Dictyostelium discoideum GN=vatM PE=1 SV=2
Length = 815
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 3 AMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDE 40
+++RS M + QLF+Q EAA+ +V LG+ G++QF D+
Sbjct: 7 SIWRSSPMQMVQLFVQIEAAHDTVDELGKLGLIQFLDD 44
>sp|Q8W4S4|VHAA3_ARATH Vacuolar proton ATPase a3 OS=Arabidopsis thaliana GN=VHA-a3 PE=1
SV=1
Length = 821
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 4 MFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
+ RSE M L QL + E+A+ +VS LG+ G+VQF+D
Sbjct: 16 LMRSETMQLVQLIVPMESAHLTVSYLGDLGLVQFKD 51
>sp|Q9SJT7|VHAA2_ARATH Vacuolar proton ATPase a2 OS=Arabidopsis thaliana GN=VHA-a2 PE=1
SV=1
Length = 821
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 4 MFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
+ RSE M L Q+ + E+A+ +VS LG+ G+VQF+D
Sbjct: 17 LMRSEPMQLVQVIVPMESAHLTVSYLGDLGLVQFKD 52
>sp|O13742|VPH1_SCHPO V-type proton ATPase subunit a OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=vph1 PE=3 SV=2
Length = 831
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 3 AMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
++FRSEE++L QL++ E+A +S LGE + F+D
Sbjct: 4 SLFRSEEVSLVQLYLPTESARPIMSALGELSTIHFKD 40
>sp|Q01290|VPH1_NEUCR V-type proton ATPase subunit a OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vph-1 PE=3 SV=1
Length = 856
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 5 FRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
FRS +M++ QL+I E + LGE G+V FRD
Sbjct: 9 FRSADMSMVQLYISNEIGREVCNALGELGLVHFRD 43
>sp|Q3B2V0|FMT_PELLD Methionyl-tRNA formyltransferase OS=Pelodictyon luteolum (strain
DSM 273) GN=fmt PE=3 SV=1
Length = 314
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEA-GIVQFRDEER-----PMCVSSSRVDWN 54
+G+ + E+AL FI EA +++ + E V +DE + ++R+DWN
Sbjct: 157 VGSDENATELALRLSFIGAEAVLATLRLIAEGRADVSLQDESMASKAPKLTRQNTRIDWN 216
Query: 55 TSHAFRHTPFVKGLGI 70
S A H F++GL +
Sbjct: 217 RSAADLHN-FIRGLSM 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,182,088
Number of Sequences: 539616
Number of extensions: 831981
Number of successful extensions: 1600
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1578
Number of HSP's gapped (non-prelim): 23
length of query: 77
length of database: 191,569,459
effective HSP length: 48
effective length of query: 29
effective length of database: 165,667,891
effective search space: 4804368839
effective search space used: 4804368839
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)