Query psy15627
Match_columns 77
No_of_seqs 104 out of 271
Neff 3.8
Searched_HMMs 13730
Date Fri Aug 16 17:33:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15627.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15627hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2v4jb3 d.134.1.1 (B:136-208,B 63.9 0.88 6.4E-05 29.0 0.6 44 18-61 129-177 (177)
2 d1nh8a2 d.58.5.3 (A:211-284) A 40.7 11 0.00078 21.7 2.8 27 7-33 34-60 (74)
3 d2cz4a1 d.58.5.1 (A:1-100) Hyp 30.9 15 0.0011 21.2 2.2 28 7-34 3-30 (100)
4 d1h3da2 d.58.5.3 (A:225-299) A 30.4 13 0.00096 21.3 1.9 28 6-33 34-61 (75)
5 d2de6a2 d.129.3.3 (A:143-384) 25.6 6.4 0.00047 27.6 -0.2 23 54-76 38-62 (242)
6 d1r7la_ d.277.1.1 (A:) Bacillu 24.4 15 0.0011 22.2 1.5 25 19-43 48-72 (103)
7 d2ebsa2 b.69.13.1 (A:431-786) 21.8 7.6 0.00056 26.5 -0.4 34 8-42 13-46 (356)
8 d1f44a2 d.163.1.1 (A:130-343) 19.9 8.1 0.00059 22.0 -0.5 9 55-63 158-166 (214)
9 d2csua1 c.2.1.8 (A:1-129) Acet 19.0 23 0.0017 21.0 1.5 27 8-34 63-89 (129)
10 d2bv3a5 d.58.11.1 (A:600-688) 18.7 35 0.0026 18.8 2.2 26 8-33 4-29 (89)
No 1
>d2v4jb3 d.134.1.1 (B:136-208,B:278-381) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]}
Probab=63.88 E-value=0.88 Score=29.02 Aligned_cols=44 Identities=14% Similarity=0.156 Sum_probs=32.3
Q ss_pred cCccHHHHHHHhhcccceeEeecCCCCCcc-----ccceecCCCccccc
Q psy15627 18 QPEAAYSSVSTLGEAGIVQFRDEERPMCVS-----SSRVDWNTSHAFRH 61 (77)
Q Consensus 18 p~E~A~d~V~eLGeLGlVQF~DLN~~v~af-----qR~y~~~~~~~~~~ 61 (77)
+.|+..+.|+++|-.-..+...++++...+ ...|+|+.++-|||
T Consensus 129 ~~Erf~~~i~R~G~e~F~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (177)
T d2v4jb3 129 KYERLGEWAERIGWERFFSLTGLEFSHHLIDDFRDPAYYTWRQSTQFKF 177 (177)
T ss_dssp TTCCHHHHHHHHCHHHHHHHHTCCCCGGGSCCSTGGGGGGBCCSSCCCC
T ss_pred ccchHHHHHHHcCcHHHHHHHCCCCCHHHHhCcccccccccccccccCC
Confidence 578888899999987777666666553222 24589999999986
No 2
>d1nh8a2 d.58.5.3 (A:211-284) ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=40.73 E-value=11 Score=21.67 Aligned_cols=27 Identities=7% Similarity=0.169 Sum_probs=24.4
Q ss_pred ccCCceEEEEecCccHHHHHHHhhccc
Q psy15627 7 SEEMALCQLFIQPEAAYSSVSTLGEAG 33 (77)
Q Consensus 7 SE~M~l~qLiip~E~A~d~V~eLGeLG 33 (77)
.++|.-++.+++.+..|+.|.+|=+.|
T Consensus 34 ~~~wvAV~~vv~e~~v~~~i~~Lk~~G 60 (74)
T d1nh8a2 34 DPDWVAIRALVPRRDVNGIMDELAAIG 60 (74)
T ss_dssp STTEEEEEEEEEGGGHHHHHHHHHHTT
T ss_pred CCCEEEEEEEEeHHHHHHHHHHHHHcC
Confidence 467889999999999999999998877
No 3
>d2cz4a1 d.58.5.1 (A:1-100) Hypothetical protein TTHA0516 {Thermus thermophilus [TaxId: 274]}
Probab=30.85 E-value=15 Score=21.24 Aligned_cols=28 Identities=11% Similarity=0.084 Sum_probs=24.5
Q ss_pred ccCCceEEEEecCccHHHHHHHhhcccc
Q psy15627 7 SEEMALCQLFIQPEAAYSSVSTLGEAGI 34 (77)
Q Consensus 7 SE~M~l~qLiip~E~A~d~V~eLGeLGl 34 (77)
..+|.++.+++.++.+.+..+.|-+.|.
T Consensus 3 ~~~mK~v~iIv~~~~~~~v~~~L~~~Gv 30 (100)
T d2cz4a1 3 LVPLKLVTIVAESLLEKRLVEEVKRLGA 30 (100)
T ss_dssp EEEEEEEEEEEEGGGHHHHHHHHHHTTC
T ss_pred ccceEEEEEEECHHHHHHHHHHHHHCCC
Confidence 4579999999999999999888888874
No 4
>d1h3da2 d.58.5.3 (A:225-299) ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=30.43 E-value=13 Score=21.28 Aligned_cols=28 Identities=7% Similarity=0.164 Sum_probs=19.8
Q ss_pred cccCCceEEEEecCccHHHHHHHhhccc
Q psy15627 6 RSEEMALCQLFIQPEAAYSSVSTLGEAG 33 (77)
Q Consensus 6 RSE~M~l~qLiip~E~A~d~V~eLGeLG 33 (77)
..++|.-++.+++.+..|+.+.+|=+.|
T Consensus 34 ~~~~wvAV~~vv~e~~v~~~i~~Lk~~G 61 (75)
T d1h3da2 34 GDQQRVAMHMVSSETLFWETMEKLKALG 61 (75)
T ss_dssp -------BEEEESSCCCHHHHHHHHHTT
T ss_pred CCCCEEEEEEEEchHHHHHHHHHHHHcC
Confidence 4578889999999999999999998877
No 5
>d2de6a2 d.129.3.3 (A:143-384) Terminal oxygenase component of carbazole CarAa {Janthinobacterium sp. j3 [TaxId: 213804]}
Probab=25.64 E-value=6.4 Score=27.58 Aligned_cols=23 Identities=43% Similarity=0.691 Sum_probs=19.4
Q ss_pred CCCccccc--ccccccceeeccCCC
Q psy15627 54 NTSHAFRH--TPFVKGLGIALPLGS 76 (77)
Q Consensus 54 ~~~~~~~~--~~~~~~~~~~~~~~~ 76 (77)
...|.|-| ++.|++-.+|||||-
T Consensus 38 D~~Hi~iHkds~~v~~~d~~lPlG~ 62 (242)
T d2de6a2 38 DPSHIYIHKDSILVKDNDLALPLGF 62 (242)
T ss_dssp CGGGGGGGTTCHHHHHTTBEECSEE
T ss_pred CcccEEEecCCceEEeccccccccc
Confidence 46788876 799999999999983
No 6
>d1r7la_ d.277.1.1 (A:) Bacillus phage protein {Bacillus cereus [TaxId: 1396]}
Probab=24.43 E-value=15 Score=22.22 Aligned_cols=25 Identities=24% Similarity=0.106 Sum_probs=21.9
Q ss_pred CccHHHHHHHhhcccceeEeecCCC
Q psy15627 19 PEAAYSSVSTLGEAGIVQFRDEERP 43 (77)
Q Consensus 19 ~E~A~d~V~eLGeLGlVQF~DLN~~ 43 (77)
-|+||+.|+.|..--.|.-.||.|.
T Consensus 48 iesawqvvekleydvkvtktdlkpk 72 (103)
T d1r7la_ 48 IESAWQVVEKLEYDVKVTKTDLKPK 72 (103)
T ss_dssp HHHHHHHHHHSSSEEEEEECSSSSS
T ss_pred hHHHHHHHHHhhheeeEeeccCCcc
Confidence 4899999999998888999998873
No 7
>d2ebsa2 b.69.13.1 (A:431-786) Oligoxyloglucan reducing end-specific cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId: 203496]}
Probab=21.84 E-value=7.6 Score=26.52 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=30.5
Q ss_pred cCCceEEEEecCccHHHHHHHhhcccceeEeecCC
Q psy15627 8 EEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDEER 42 (77)
Q Consensus 8 E~M~l~qLiip~E~A~d~V~eLGeLGlVQF~DLN~ 42 (77)
|||....|+-|+.-| ..|+.+|..|=.-+.||..
T Consensus 13 ee~~~~~l~spp~g~-~l~s~~gd~~gf~~~dl~~ 46 (356)
T d2ebsa2 13 EENAILSLRSPKSGA-ALLSGIGNISGMKHDDLTK 46 (356)
T ss_dssp BCCBEEEEECCSSSS-SEEEEESSSBCBEESCTTS
T ss_pred ehhheeeeEcCCCCC-ceeEEEecCCceEEccCCC
Confidence 899999999999988 5899999999888899964
No 8
>d1f44a2 d.163.1.1 (A:130-343) Cre recombinase {Bacteriophage P1 [TaxId: 10678]}
Probab=19.92 E-value=8.1 Score=21.98 Aligned_cols=9 Identities=22% Similarity=0.320 Sum_probs=7.4
Q ss_pred CCccccccc
Q psy15627 55 TSHAFRHTP 63 (77)
Q Consensus 55 ~~~~~~~~~ 63 (77)
+.|.||||=
T Consensus 158 t~HslRht~ 166 (214)
T d1f44a2 158 SGHSARVGA 166 (214)
T ss_dssp CTTHHHHHH
T ss_pred chhhhhccc
Confidence 679999984
No 9
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=18.96 E-value=23 Score=20.97 Aligned_cols=27 Identities=19% Similarity=0.401 Sum_probs=23.9
Q ss_pred cCCceEEEEecCccHHHHHHHhhcccc
Q psy15627 8 EEMALCQLFIQPEAAYSSVSTLGEAGI 34 (77)
Q Consensus 8 E~M~l~qLiip~E~A~d~V~eLGeLGl 34 (77)
++-.++-+++|.+.+-+.+.++++.|.
T Consensus 63 ~~vDlvvi~vp~~~~~~~~~~~~~~g~ 89 (129)
T d2csua1 63 DEIDLAIIVVPKRFVKDTLIQCGEKGV 89 (129)
T ss_dssp SCCSEEEECSCHHHHHHHHHHHHHHTC
T ss_pred CCCceEEEecChHHhHHHHHHHHHcCC
Confidence 456788899999999999999999984
No 10
>d2bv3a5 d.58.11.1 (A:600-688) Elongation factor G (EF-G) {Thermus thermophilus [TaxId: 274]}
Probab=18.68 E-value=35 Score=18.77 Aligned_cols=26 Identities=12% Similarity=0.069 Sum_probs=23.3
Q ss_pred cCCceEEEEecCccHHHHHHHhhccc
Q psy15627 8 EEMALCQLFIQPEAAYSSVSTLGEAG 33 (77)
Q Consensus 8 E~M~l~qLiip~E~A~d~V~eLGeLG 33 (77)
|+|-.+.+.+|.|..-.+++.|.+.-
T Consensus 4 EPi~~~~I~~p~e~~g~v~~~l~~rr 29 (89)
T d2bv3a5 4 EPIMRVEVTTPEEYMGDVIGDLNARR 29 (89)
T ss_dssp EEEEEEEEEEEGGGHHHHHHHHHTTT
T ss_pred CcEEEEEEEECHHHHHHHHHHHHHcC
Confidence 67888999999999999999998764
Done!