BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15628
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q29466|VPP1_BOVIN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus
GN=ATP6V0A1 PE=2 SV=1
Length = 838
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD++ ++ +F E C
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEE 60
Query: 61 SSR 63
R
Sbjct: 61 MDR 63
>sp|Q9HBG4|VPP4_HUMAN V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens
GN=ATP6V0A4 PE=1 SV=2
Length = 840
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
M ++FRSEEM L QLF+Q EAAY V+ LGE G+VQF+D+++ +++ +F E C S
Sbjct: 1 MVSVFRSEEMCLSQLFLQVEAAYCCVAELGELGLVQFKDLNMNVNSFQRKFVNEVRRCES 60
Query: 61 SSRV 64
R+
Sbjct: 61 LERI 64
>sp|A1A5G6|VPP1_XENTR V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus
tropicalis GN=atp6v0a1 PE=2 SV=1
Length = 837
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD++ ++ +F E C
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEE 60
Query: 61 SSR 63
R
Sbjct: 61 MDR 63
>sp|Q9Z1G4|VPP1_MOUSE V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus
GN=Atp6v0a1 PE=1 SV=3
Length = 839
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD++ ++ +F E C
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEE 60
Query: 61 SSR 63
R
Sbjct: 61 MDR 63
>sp|Q93050|VPP1_HUMAN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens
GN=ATP6V0A1 PE=1 SV=3
Length = 837
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD++ ++ +F E C
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEE 60
Query: 61 SSR 63
R
Sbjct: 61 MDR 63
>sp|Q9I8D0|VPP1_CHICK V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus
GN=ATP6V0A1 PE=1 SV=1
Length = 838
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD++ ++ +F E C
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEE 60
Query: 61 SSR 63
R
Sbjct: 61 MDR 63
>sp|Q8AVM5|VPP1_XENLA V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus
laevis GN=atp6v0a1 PE=2 SV=1
Length = 831
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD++ ++ +F E C
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEE 60
Query: 61 SSR 63
R
Sbjct: 61 MDR 63
>sp|Q5R422|VPP1_PONAB V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii
GN=ATP6V0A1 PE=2 SV=1
Length = 837
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
MG +FRSEEM L QLF+Q EAAY VS LGE G VQFRD++ ++ +F E C
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEE 60
Query: 61 SSR 63
R
Sbjct: 61 MDR 63
>sp|Q920R6|VPP4_MOUSE V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus
GN=Atp6v0a4 PE=2 SV=1
Length = 833
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
M ++FRSEEM L Q+F+Q EAAY V+ LGE G+VQF+D++ +++ +F E C S
Sbjct: 1 MASVFRSEEMCLSQVFLQVEAAYCCVAELGELGLVQFKDLNANVNSFQRKFVNEVRRCES 60
Query: 61 SSRV 64
R+
Sbjct: 61 LERI 64
>sp|P25286|VPP1_RAT V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus
norvegicus GN=Atp6v0a1 PE=2 SV=1
Length = 838
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 38/63 (60%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
MG +FRSEEM L QLF+Q EAAY VS L E G VQFRD++ ++ +F E C
Sbjct: 1 MGELFRSEEMTLAQLFLQSEAAYCCVSELEELGKVQFRDLNPDVNVFQRKFVNEVRRCEE 60
Query: 61 SSR 63
R
Sbjct: 61 MDR 63
>sp|Q13488|VPP3_HUMAN V-type proton ATPase 116 kDa subunit a isoform 3 OS=Homo sapiens
GN=TCIRG1 PE=1 SV=3
Length = 830
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRF 51
MG+MFRSEE+AL QLF+ AAY+ VS LGE G+V+FRD++ ++ RF
Sbjct: 1 MGSMFRSEEVALVQLFLPTAAAYTCVSRLGELGLVEFRDLNASVSAFQRRF 51
>sp|P15920|VPP2_MOUSE V-type proton ATPase 116 kDa subunit a isoform 2 OS=Mus musculus
GN=Atp6v0a2 PE=1 SV=2
Length = 856
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
MG++FRSE M L QLF+Q AY +S LGE G+VQFRD++ + + +F E C
Sbjct: 1 MGSLFRSESMCLAQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVKRCEE 60
Query: 61 SSRV 64
R+
Sbjct: 61 LERI 64
>sp|Q9Y487|VPP2_HUMAN V-type proton ATPase 116 kDa subunit a isoform 2 OS=Homo sapiens
GN=ATP6V0A2 PE=1 SV=2
Length = 856
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
MG++FRSE M L QLF+Q AY +S LGE G+VQFRD++ + + +F E C
Sbjct: 1 MGSLFRSETMCLAQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVKRCEE 60
Query: 61 SSRV 64
R+
Sbjct: 61 LERI 64
>sp|O97681|VPP2_BOVIN V-type proton ATPase 116 kDa subunit a isoform 2 OS=Bos taurus
GN=ATP6V0A2 PE=2 SV=1
Length = 854
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
MG++FRSE M L QLF+Q AY +S LGE G+V+FRD++ + + +F E C
Sbjct: 1 MGSLFRSETMCLAQLFLQSGTAYECLSVLGEKGLVEFRDLNQNVSSFQRKFVGEVKRCEE 60
Query: 61 SSRV 64
R+
Sbjct: 61 LERI 64
>sp|P30628|VPP1_CAEEL Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis
elegans GN=unc-32 PE=2 SV=3
Length = 905
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 3 AMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVSSS 62
++RSE+M L QL++Q +A+Y V+ LGE G+VQFRD++ + + ++ E C
Sbjct: 15 GIYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEME 74
Query: 63 R 63
R
Sbjct: 75 R 75
>sp|P32563|VPH1_YEAST V-type proton ATPase subunit a, vacuolar isoform OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPH1 PE=1
SV=3
Length = 840
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 3 AMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVSSS 62
A+FRS EMAL Q +I E + S TLG+ G+VQFRD L+++ FQ R
Sbjct: 7 AIFRSAEMALVQFYIPQEISRDSAYTLGQLGLVQFRD----LNSKVRAFQ--RTFVNEIR 60
Query: 63 RVDWNTSHAFRH 74
R+D N +R+
Sbjct: 61 RLD-NVERQYRY 71
>sp|Q8RWZ7|VHAA1_ARATH Vacuolar proton ATPase a1 OS=Arabidopsis thaliana GN=VHA-a1 PE=1
SV=1
Length = 817
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 4 MFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVS 41
+ RSE+M L QL I E+A+ S++ LGE G++QFRD++
Sbjct: 13 LMRSEKMTLVQLIIPVESAHRSITYLGELGLLQFRDLN 50
>sp|Q54E04|VATM_DICDI Vacuolar proton translocating ATPase 100 kDa subunit
OS=Dictyostelium discoideum GN=vatM PE=1 SV=2
Length = 815
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 3 AMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRD 39
+++RS M + QLF+Q EAA+ +V LG+ G++QF D
Sbjct: 7 SIWRSSPMQMVQLFVQIEAAHDTVDELGKLGLIQFLD 43
>sp|Q8W4S4|VHAA3_ARATH Vacuolar proton ATPase a3 OS=Arabidopsis thaliana GN=VHA-a3 PE=1
SV=1
Length = 821
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 4 MFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVS 41
+ RSE M L QL + E+A+ +VS LG+ G+VQF+D++
Sbjct: 16 LMRSETMQLVQLIVPMESAHLTVSYLGDLGLVQFKDLN 53
>sp|O13742|VPH1_SCHPO V-type proton ATPase subunit a OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=vph1 PE=3 SV=2
Length = 831
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 3 AMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVS---ITLDTQFNR-----FQEE 54
++FRSEE++L QL++ E+A +S LGE + F+D++ + F R E
Sbjct: 4 SLFRSEEVSLVQLYLPTESARPIMSALGELSTIHFKDLNPDVVAFQRSFVREIRRLTDTE 63
Query: 55 RPMCVSSSRVDWNTSHAFRHT 75
R + S +D N H H
Sbjct: 64 RLLRYLHSEIDLNGIHVPDHN 84
>sp|Q9SJT7|VHAA2_ARATH Vacuolar proton ATPase a2 OS=Arabidopsis thaliana GN=VHA-a2 PE=1
SV=1
Length = 821
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 4 MFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVS 41
+ RSE M L Q+ + E+A+ +VS LG+ G+VQF+D++
Sbjct: 17 LMRSEPMQLVQVIVPMESAHLTVSYLGDLGLVQFKDLN 54
>sp|Q01290|VPH1_NEUCR V-type proton ATPase subunit a OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vph-1 PE=3 SV=1
Length = 856
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 5 FRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVSSSRV 64
FRS +M++ QL+I E + LGE G+V FRD L+++ + FQ R R+
Sbjct: 9 FRSADMSMVQLYISNEIGREVCNALGELGLVHFRD----LNSELSAFQ--RAFTQDIRRL 62
Query: 65 DWNTSHAFRH 74
D N R+
Sbjct: 63 D-NVERQLRY 71
>sp|Q3B2V0|FMT_PELLD Methionyl-tRNA formyltransferase OS=Pelodictyon luteolum (strain
DSM 273) GN=fmt PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 1 MGAMFRSEEMALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVS 60
+G+ + E+AL FI EA +++ + E DVS+ ++ ++ + +
Sbjct: 157 VGSDENATELALRLSFIGAEAVLATLRLIAEGRA----DVSLQDESMASKAPK---LTRQ 209
Query: 61 SSRVDWNTSHAFRHTPFVKGLGI 83
++R+DWN S A H F++GL +
Sbjct: 210 NTRIDWNRSAADLHN-FIRGLSM 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,968,882
Number of Sequences: 539616
Number of extensions: 979999
Number of successful extensions: 2554
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2532
Number of HSP's gapped (non-prelim): 23
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)