RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15628
         (90 letters)



>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces
          cerevisiae) [TaxId: 4932]}
          Length = 289

 Score = 24.1 bits (51), Expect = 3.6
 Identities = 11/49 (22%), Positives = 14/49 (28%), Gaps = 2/49 (4%)

Query: 26 VSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCVSSSRVDWNTSHAFRH 74
          +ST    GI  FR     L     R +   P  V       +    F  
Sbjct: 31 IST--SCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYT 77


>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I)
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 261

 Score = 23.6 bits (51), Expect = 4.4
 Identities = 10/55 (18%), Positives = 16/55 (29%), Gaps = 18/55 (32%)

Query: 33  GIVQFRDVSITLDTQ-FNRFQE-----------------ERPMCVSSSRVDWNTS 69
           G+V F D   T   + F   +                  E P       V ++T+
Sbjct: 114 GVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGGLRFEGPQVQDGRVVGFHTA 168


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.134    0.400 

Gapped
Lambda     K      H
   0.267   0.0625    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 305,602
Number of extensions: 10473
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 6
Length of query: 90
Length of database: 2,407,596
Length adjustment: 54
Effective length of query: 36
Effective length of database: 1,666,176
Effective search space: 59982336
Effective search space used: 59982336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 47 (22.1 bits)