BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15631
(213 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345494190|ref|XP_003427240.1| PREDICTED: transcription factor Sox-14-like [Nasonia vitripennis]
Length = 339
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 129/246 (52%), Gaps = 60/246 (24%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
+K+PFIDEAKRLRA HMKEHPDYKYRPRRKPK P +IP K+ + GA +FPS
Sbjct: 120 QKQPFIDEAKRLRAKHMKEHPDYKYRPRRKPKVPVSAIPGGKNQSMGA--------SFPS 171
Query: 62 FPLPPYFANHGG---GSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQTSQADT 118
F L PYF + G HPHPLD YPP +P YFGS FDA++ KLV SQ +
Sbjct: 172 FTL-PYFGSPAGPVSHHHPHPLD-----YPP--LPGYFGSAFDAVHLGKLVSNTQSQQTS 223
Query: 119 KS--------SNAAAAVVSSFYSSLYPSVTSAQTKTFSTPPPSHLSALFQHPTAASSHPS 170
+ + +AAAVVSSFYSSLY + + Q K + + +LF P AA H
Sbjct: 224 TTAADVANNNAASAAAVVSSFYSSLY-NPAAQQNKVSPYGAATTMGSLF--PGAAHHH-- 278
Query: 171 QFLYGLKSEQLSPSSSPGESQ-----------------------SQSNNQSALELDQLRR 207
+ S + P S SQ S S +L+LDQLRR
Sbjct: 279 -----MTSSMMFPGSQLTASQMTHSSSSPSSSPGSTPVSLSHGSSTSPTAPSLDLDQLRR 333
Query: 208 PVPVIY 213
P+ VIY
Sbjct: 334 PLSVIY 339
>gi|350416776|ref|XP_003491097.1| PREDICTED: SOX domain-containing protein dichaete-like [Bombus
impatiens]
Length = 311
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 128/247 (51%), Gaps = 56/247 (22%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPFIDEAKRLRA+HMK+HPDYKYRPRRKPK P +I N K+ + S AF +
Sbjct: 86 EKRPFIDEAKRLRAVHMKQHPDYKYRPRRKPKIP-VAIGNGKTVSIN-------SGAFAN 137
Query: 62 FPLPPYFANHGGG-SHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQTSQA---- 116
FPLPPYFA SH HP PP FGS FD ++ SKLV G + +
Sbjct: 138 FPLPPYFAAPATSVSHHHPHPLDYPPLPPY-----FGSAFDPVHLSKLVAGSGTGSPSTN 192
Query: 117 -----DTKSSNAAAAVVSSFYSSLYPSVTSAQTKTFSTPPPSHLSALF---QHPTAASS- 167
++ +AAAVVSSFY+ Y + TS +T SHL LF H +A++
Sbjct: 193 AAADAANNNAASAAAVVSSFYTGFYSTPTSGAKPYPTT--ASHLGPLFPTGHHSVSATTP 250
Query: 168 HPSQFLYGLKSEQLSPSSSPGESQSQ-------------SNNQSA--------LELDQLR 206
HP Q S ++ PG + S++Q A L+++QLR
Sbjct: 251 HPPLVF------QSSAATDPGSIATTSSPGSSPGSTPIPSSHQHAPTSATPTTLDMEQLR 304
Query: 207 RPVPVIY 213
RPVPVIY
Sbjct: 305 RPVPVIY 311
>gi|340721649|ref|XP_003399229.1| PREDICTED: SOX domain-containing protein dichaete-like [Bombus
terrestris]
Length = 311
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 128/243 (52%), Gaps = 48/243 (19%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPFIDEAKRLRA+HMK+HPDYKYRPRRKPK SI N K+ + S++F S
Sbjct: 86 EKRPFIDEAKRLRAVHMKQHPDYKYRPRRKPKI-AVSIGNGKTVSLN-------SSSFAS 137
Query: 62 FPLPPYFAN-HGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQTSQA---- 116
FPLPPYFA SH HP PP FGS FDA++FSKLV G + +
Sbjct: 138 FPLPPYFAAPATSVSHHHPHPLDYPPLPPY-----FGSAFDAVHFSKLVAGSGTGSPSTN 192
Query: 117 -----DTKSSNAAAAVVSSFYSSLYPSVTSAQTKTFSTPPPSHLSALFQHPTAASSHPSQ 171
++ +AAAVVSSFY+ LY + T+ +T SHL LF PT S P+
Sbjct: 193 AAADVANNNAASAAAVVSSFYTGLYSTPTTPTKPYPTT--ASHLGPLF--PTGHHSVPAT 248
Query: 172 FLYGLKSEQLSPSSSPGESQSQ---------------------SNNQSALELDQLRRPVP 210
+ Q S ++ PG + ++ S L+++QLRRPVP
Sbjct: 249 TPHPPLMFQSSAATGPGSIVTTTSSPGSSPGSTPIPSSHQHVPTSATSTLDMEQLRRPVP 308
Query: 211 VIY 213
VIY
Sbjct: 309 VIY 311
>gi|380016546|ref|XP_003692243.1| PREDICTED: SOX domain-containing protein dichaete-like [Apis
florea]
Length = 279
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 101/187 (54%), Gaps = 30/187 (16%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +P GA + + FPS
Sbjct: 89 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKVPVSVVP-------GAKTTSMSPGGFPS 141
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLV------------ 109
FPLPPYFA H YPP +P YFGS FDA++ SKLV
Sbjct: 142 FPLPPYFAAPAAPVSHHHHHPHPLDYPP--LPSYFGSAFDAVHLSKLVAGGGGTGSTSSS 199
Query: 110 -----QGQTSQADTKSSNAAAAVVSSFYSSLYPSVTSAQTKTFSTPPPSHLSALF--QHP 162
+ A ++ +AAAVV+SFYS Y + T+ ST SHL LF H
Sbjct: 200 AAAAAAAAAADAANNNAASAAAVVNSFYSGFYSTPTTPGKPYPST--ASHLGPLFPPGHH 257
Query: 163 TAASSHP 169
T A++ P
Sbjct: 258 TMATNTP 264
>gi|157111610|ref|XP_001651645.1| sex-determining region y protein, sry [Aedes aegypti]
gi|108883819|gb|EAT48044.1| AAEL000893-PA [Aedes aegypti]
Length = 314
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 79/147 (53%), Gaps = 19/147 (12%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
+KRPFIDEAKRLRA HMKEHPDYKYRPRRKPK P + S A + +++P
Sbjct: 124 QKRPFIDEAKRLRASHMKEHPDYKYRPRRKPKNPLANAAGGLSLGMQQSAKNALGSSYPF 183
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQTSQADTKSS 121
LPPYFA H L L YP +P YFG FD + SKL Q Q + T +
Sbjct: 184 PQLPPYFAP------THHLQQLEQHYP---VP-YFGG-FDPLTLSKLHQSQQNMQSTSPT 232
Query: 122 NAAA--------AVVSSFYSSLYPSVT 140
A +SSFYS++Y ++
Sbjct: 233 GLEAQKTQQMPPTSLSSFYSNIYSGIS 259
>gi|357607486|gb|EHJ65526.1| hypothetical protein KGM_19696 [Danaus plexippus]
Length = 202
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 111/214 (51%), Gaps = 53/214 (24%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFP 60
M+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P + AFP
Sbjct: 41 MQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKPPTAGG-------------APGAGAFP 87
Query: 61 SFPLPPYFANHGGGSHPHPLDSLS-AAYPPMNMPHYFGSPFDAMNFSKLVQGQTSQADTK 119
SFPL PYFA G PLD+LS +A PP YF D + FSKL+ T + T
Sbjct: 88 SFPL-PYFA--GPAPTVGPLDALSYSAVPP-----YFPHQLDHLQFSKLM-APTEKLPTA 138
Query: 120 SSNAAAAVVSSFYSSLYPSVTSAQTKTFSTPPPSHLSALFQHPTAASSHPSQFLYGLKSE 179
SS AA SSFYSSLY + +A K F +P LF AA + P
Sbjct: 139 SSAAAVV--SSFYSSLY-TQPAAPPKPFPSP-------LFHQYGAAPASP---------- 178
Query: 180 QLSPSSSPGESQSQSNNQSALELDQLRRPVPVIY 213
+SP +S Q + DQLRRPV VIY
Sbjct: 179 -VSPVTS---------TQHSPHDDQLRRPVSVIY 202
>gi|195161050|ref|XP_002021383.1| GL24831 [Drosophila persimilis]
gi|194118496|gb|EDW40539.1| GL24831 [Drosophila persimilis]
Length = 403
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 97/211 (45%), Gaps = 44/211 (20%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-------GQSIPNNKSPNQGAPAPTS 54
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P G + N Q
Sbjct: 195 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPMTAGPQGGLQMQANGMGQQKLGGGPG 254
Query: 55 ASNAF--PSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQ 112
A P LPPYFA P L YP +P YFG FD + SKL Q Q
Sbjct: 255 AGAGGYNPFHQLPPYFA---------PSHHLDQPYP---VP-YFGG-FDPLALSKLHQSQ 300
Query: 113 TSQADTKSSNAAAAV-------------VSSFYSSLY-----PSVTSAQTKTFSTPPPSH 154
+ A ++ + +SSFYS +Y PS+ +A + + P H
Sbjct: 301 AAAAAAANNQGHKVLESQQAPPQLPPTSLSSFYSGIYSGMSAPSLYAAHSANARSRWPVH 360
Query: 155 LSALFQHPTAASSHPSQF---LYGLKSEQLS 182
L A +H +Q+ L+G + E S
Sbjct: 361 LIVHLLARILAGNHHTQWNGRLHGQRPEATS 391
>gi|194747990|ref|XP_001956432.1| GF25204 [Drosophila ananassae]
gi|190623714|gb|EDV39238.1| GF25204 [Drosophila ananassae]
Length = 387
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 78/160 (48%), Gaps = 34/160 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF-- 59
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P + P QG P A
Sbjct: 191 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLTAGPQGGLQMQGGPMGQQKLGAGAG 250
Query: 60 -------PSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQ 112
P LPPYFA P L YP +P YFG FD + SKL Q Q
Sbjct: 251 AGPGGYNPFHQLPPYFA---------PSHHLDQPYP---VP-YFGG-FDPLALSKLHQSQ 296
Query: 113 TSQADTKSSNAAAAV-----------VSSFYSSLYPSVTS 141
+ A ++ +SSFYS +Y +++
Sbjct: 297 AAAAAAVNNQVHKVEPQAPPQLPPTSLSSFYSGIYSGISA 336
>gi|158287886|ref|XP_001688246.1| AGAP010919-PA [Anopheles gambiae str. PEST]
gi|157019404|gb|EDO64436.1| AGAP010919-PA [Anopheles gambiae str. PEST]
Length = 330
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 77/155 (49%), Gaps = 31/155 (20%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
+KRPFIDEAKRLRA HMKEHPDYKYRPRRKPK P S N A + S
Sbjct: 130 QKRPFIDEAKRLRATHMKEHPDYKYRPRRKPKNPLASAANGLGALGAMQQSGKAGSLGSS 189
Query: 62 FP---LPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKL---------- 108
+P LPPYFA HPL L YP +P YFGS FD + KL
Sbjct: 190 YPFPQLPPYFAP------AHPLQQLEQHYP---VP-YFGS-FDPLTLQKLHQSQQQSVHQ 238
Query: 109 -----VQGQTSQADTKSSNAAA--AVVSSFYSSLY 136
V G + +S+ +SSFYS++Y
Sbjct: 239 AGHSPVGGLGGDSGKQSAGQQLPPTSLSSFYSNIY 273
>gi|195494282|ref|XP_002094770.1| GE20027 [Drosophila yakuba]
gi|194180871|gb|EDW94482.1| GE20027 [Drosophila yakuba]
Length = 381
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 77/158 (48%), Gaps = 32/158 (20%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQ-GAPAPTSASNAF- 59
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P + P Q GA
Sbjct: 187 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLTAGPQGGLQMQAGAMGQQKLGAGPA 246
Query: 60 ------PSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQT 113
P LPPYFA P L YP +P YFG FD + SKL Q Q
Sbjct: 247 GAGGYNPFHQLPPYFA---------PSHHLDQGYP---VP-YFGG-FDPLALSKLHQSQA 292
Query: 114 SQADTKSSNAAAAV----------VSSFYSSLYPSVTS 141
+ A ++ +SSFYS +Y +++
Sbjct: 293 AAAAAVNNQGQQQGQAPPQLPPTSLSSFYSGIYSGISA 330
>gi|195327522|ref|XP_002030467.1| GM24555 [Drosophila sechellia]
gi|195590206|ref|XP_002084837.1| GD12627 [Drosophila simulans]
gi|194119410|gb|EDW41453.1| GM24555 [Drosophila sechellia]
gi|194196846|gb|EDX10422.1| GD12627 [Drosophila simulans]
Length = 382
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 76/159 (47%), Gaps = 33/159 (20%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGA---------PAP 52
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P + P Q
Sbjct: 187 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLTAGPQGGLQMQAGGMGQQKLGAGPG 246
Query: 53 TSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQ 112
A P LPPYFA P L YP +P YFG FD + SKL Q Q
Sbjct: 247 AGAGGYNPFHQLPPYFA---------PSHHLDQGYP---VP-YFGG-FDPLALSKLHQSQ 292
Query: 113 TSQADTKSSNAAAAV----------VSSFYSSLYPSVTS 141
+ A ++ +SSFYS +Y +++
Sbjct: 293 AAAAAAVNNQGQQQGQAPPQLPPTSLSSFYSGIYSGISA 331
>gi|194870747|ref|XP_001972713.1| GG13733 [Drosophila erecta]
gi|190654496|gb|EDV51739.1| GG13733 [Drosophila erecta]
Length = 382
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 76/159 (47%), Gaps = 33/159 (20%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGA---------PAP 52
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P + P Q
Sbjct: 187 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLTAGPQGGLQMQAGGMGQQKLGAGPG 246
Query: 53 TSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQ 112
A P LPPYFA P L YP +P YFG FD + SKL Q Q
Sbjct: 247 AGAGGYNPFHQLPPYFA---------PSHHLDQGYP---VP-YFGG-FDPLALSKLHQSQ 292
Query: 113 TSQADTKSSNAAAAV----------VSSFYSSLYPSVTS 141
+ A ++ +SSFYS +Y +++
Sbjct: 293 AAAAAAVNNQGQQQGQAPPQLPPTSLSSFYSGIYSGISA 331
>gi|21429704|gb|AAM50530.1| AT02631p [Drosophila melanogaster]
Length = 381
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 76/159 (47%), Gaps = 33/159 (20%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGA---------PAP 52
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P + P Q
Sbjct: 186 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLTAGPQGGLQMQAGGMGQQKLGAGPG 245
Query: 53 TSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQ 112
A P LPPYFA P L YP +P YFG FD + SKL Q Q
Sbjct: 246 AGAGGYNPFHQLPPYFA---------PSHHLDQGYP---VP-YFGG-FDPLALSKLHQSQ 291
Query: 113 TSQADTKSSNAAAAV----------VSSFYSSLYPSVTS 141
+ A ++ +SSFYS +Y +++
Sbjct: 292 AAAAAAVNNQGQQQGQAPPQLPPTSLSSFYSGIYSGISA 330
>gi|17975536|ref|NP_524066.1| dichaete, isoform A [Drosophila melanogaster]
gi|442632269|ref|NP_001261830.1| dichaete, isoform B [Drosophila melanogaster]
gi|442632271|ref|NP_001261831.1| dichaete, isoform C [Drosophila melanogaster]
gi|442632273|ref|NP_001261832.1| dichaete, isoform D [Drosophila melanogaster]
gi|3913481|sp|Q24533.1|DICH_DROME RecName: Full=SOX domain-containing protein dichaete; AltName:
Full=Protein fish-hook
gi|1359612|emb|CAA65279.1| SOX-domain protein [Drosophila melanogaster]
gi|1519713|gb|AAB49673.1| SOX HMG domain protein [Drosophila melanogaster]
gi|7294407|gb|AAF49753.1| dichaete, isoform A [Drosophila melanogaster]
gi|125660032|gb|ABN49244.1| FI01304p [Drosophila melanogaster]
gi|440215769|gb|AGB94523.1| dichaete, isoform B [Drosophila melanogaster]
gi|440215770|gb|AGB94524.1| dichaete, isoform C [Drosophila melanogaster]
gi|440215771|gb|AGB94525.1| dichaete, isoform D [Drosophila melanogaster]
Length = 382
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 76/159 (47%), Gaps = 33/159 (20%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGA---------PAP 52
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P + P Q
Sbjct: 187 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLTAGPQGGLQMQAGGMGQQKLGAGPG 246
Query: 53 TSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQ 112
A P LPPYFA P L YP +P YFG FD + SKL Q Q
Sbjct: 247 AGAGGYNPFHQLPPYFA---------PSHHLDQGYP---VP-YFGG-FDPLALSKLHQSQ 292
Query: 113 TSQADTKSSNAAAAV----------VSSFYSSLYPSVTS 141
+ A ++ +SSFYS +Y +++
Sbjct: 293 AAAAAAVNNQGQQQGQAPPQLPPTSLSSFYSGIYSGISA 331
>gi|125979029|ref|XP_001353547.1| GA19209 [Drosophila pseudoobscura pseudoobscura]
gi|54642310|gb|EAL31059.1| GA19209 [Drosophila pseudoobscura pseudoobscura]
Length = 395
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 78/162 (48%), Gaps = 36/162 (22%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-------GQSIPNNKSPNQGAPAPTS 54
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P G + N Q
Sbjct: 195 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPMTAGPQGGLQMQANGMGQQKLGGGPG 254
Query: 55 ASNAF--PSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQ 112
A P LPPYFA P L YP +P YFG FD + SKL Q Q
Sbjct: 255 AGAGGYNPFHQLPPYFA---------PSHHLDQPYP---VP-YFGG-FDPLALSKLHQSQ 300
Query: 113 TSQADTKSSNAAAAV-------------VSSFYSSLYPSVTS 141
+ A ++ + +SSFYS +Y +++
Sbjct: 301 AAAAAAANNQGHKVLESQQAPPQLPPTSLSSFYSGIYSGMSA 342
>gi|449279817|gb|EMC87282.1| Transcription factor Sox-21-B [Columba livia]
Length = 975
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 47/73 (64%), Gaps = 8/73 (10%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAP-------APTS 54
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT + GAP A
Sbjct: 376 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLLKKDNAYSGQTWGAPSLRRLLAALIC 435
Query: 55 ASNAFPSFPLPPY 67
S+A SFPLPP
Sbjct: 436 VSSAV-SFPLPPL 447
>gi|195128973|ref|XP_002008933.1| GI11536 [Drosophila mojavensis]
gi|193920542|gb|EDW19409.1| GI11536 [Drosophila mojavensis]
Length = 413
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 76/170 (44%), Gaps = 44/170 (25%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF-- 59
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P S P Q N
Sbjct: 205 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLASGPQGALQMQSNMNMNMNMNMNMN 264
Query: 60 ---------------------PSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGS 98
P LPPYFA P L YP +P++ G
Sbjct: 265 MNMAQQKLGAAGAGPAGGGYNPFHQLPPYFA---------PSHHLDQPYP---VPYFTG- 311
Query: 99 PFDAMNFSKLVQGQTSQADT-------KSSNAAAAVVSSFYSSLYPSVTS 141
FD + SKL Q + T ++S +SSFYS +Y +++
Sbjct: 312 -FDPLALSKLHQSAAANNQTHKHLEAQQASQLPPTSLSSFYSGIYSGISA 360
>gi|328705536|ref|XP_001944245.2| PREDICTED: hypothetical protein LOC100165687 [Acyrthosiphon pisum]
Length = 553
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFP 60
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT Q + S G P P S + P
Sbjct: 283 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTMVQK-KTDTSAVSGKPVPYSVRDLLP 340
>gi|242007463|ref|XP_002424559.1| transcription factor Sox-3, putative [Pediculus humanus corporis]
gi|212508002|gb|EEB11821.1| transcription factor Sox-3, putative [Pediculus humanus corporis]
Length = 261
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 71/137 (51%), Gaps = 36/137 (26%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASN-AF 59
+EKRP+IDEAKRLR HM EHP YKY+PRRKPKT Q + + +P + N AF
Sbjct: 70 IEKRPYIDEAKRLRVTHMIEHPGYKYKPRRKPKTCQQ--------QKQSKSPDAVQNYAF 121
Query: 60 PSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQ------- 112
P F P+ S P SLS YF + DA + SK+V GQ
Sbjct: 122 PYF--APF------KSQPSDHSSLST---------YFNTALDAFHLSKIVSGQITSFNQD 164
Query: 113 ---TSQADTKSSNAAAA 126
T Q D+ ++N+A+A
Sbjct: 165 QKITEQTDSSTTNSASA 181
>gi|195427295|ref|XP_002061712.1| GK17143 [Drosophila willistoni]
gi|194157797|gb|EDW72698.1| GK17143 [Drosophila willistoni]
Length = 420
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 79/160 (49%), Gaps = 34/160 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPN-QGAPAPTSASNAF- 59
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P + P QG
Sbjct: 222 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLAAGPGQGGLQLQGNVGQQKLGGGAG 281
Query: 60 --------PSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQG 111
P LPPYFA P L AYP +P YFG FD + SKL Q
Sbjct: 282 AGAGGAYNPFHQLPPYFA---------PSHHLEQAYP---VP-YFGG-FDPLALSKLHQS 327
Query: 112 QTSQADTKSSNAAAAV----------VSSFYSSLYPSVTS 141
Q S A ++N + +SSFYS +Y +++
Sbjct: 328 QASMAAAAANNQSQQSAASGQLPPTSLSSFYSGIYSGISA 367
>gi|195378572|ref|XP_002048057.1| GJ11555 [Drosophila virilis]
gi|194155215|gb|EDW70399.1| GJ11555 [Drosophila virilis]
Length = 414
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 76/170 (44%), Gaps = 44/170 (25%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF-- 59
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P + P Q N
Sbjct: 206 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLAAGPQGALQMQSNMNMNMNMNMNMN 265
Query: 60 ---------------------PSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGS 98
P LPPYFA P L YP +P++ G
Sbjct: 266 MNMAQQKLGAAGGGPAGGGYNPFHQLPPYFA---------PSHHLDQPYP---VPYFTG- 312
Query: 99 PFDAMNFSKLVQGQTSQADT-------KSSNAAAAVVSSFYSSLYPSVTS 141
FD + SKL Q + T ++S +SSFYS +Y +++
Sbjct: 313 -FDPLALSKLHQSAAANNQTHKHLEAQQASQLPPTSLSSFYSGIYSGISA 361
>gi|383864574|ref|XP_003707753.1| PREDICTED: SOX domain-containing protein dichaete-like [Megachile
rotundata]
Length = 206
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 35/41 (85%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNN 42
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +P
Sbjct: 89 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKVPVSVVPGK 129
>gi|195015697|ref|XP_001984254.1| GH16344 [Drosophila grimshawi]
gi|193897736|gb|EDV96602.1| GH16344 [Drosophila grimshawi]
Length = 413
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 76/168 (45%), Gaps = 42/168 (25%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P + P Q N S
Sbjct: 207 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLAAGPQGALQMQNNMNMNMNMNMNMS 266
Query: 62 FP---------------------LPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPF 100
LPPYFA P L YP +P++ G F
Sbjct: 267 MAQQKLGAAGGGPAGGGYNPFHQLPPYFA---------PSHHLDQPYP---VPYFTG--F 312
Query: 101 DAMNFSKLVQGQTSQADT-------KSSNAAAAVVSSFYSSLYPSVTS 141
D + SKL Q + T ++S +SSFYS +Y +++
Sbjct: 313 DPLALSKLHQSAAANNQTHKHLEAQQASQLPPTSLSSFYSGIYSGISA 360
>gi|195015701|ref|XP_001984255.1| GH16346 [Drosophila grimshawi]
gi|193897737|gb|EDV96603.1| GH16346 [Drosophila grimshawi]
Length = 645
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 45/70 (64%), Gaps = 15/70 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---------------TPGQSIPNNKSPN 46
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +++ SP
Sbjct: 346 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGISPG 405
Query: 47 QGAPAPTSAS 56
AP PT+A+
Sbjct: 406 YFAPGPTAAA 415
>gi|195378570|ref|XP_002048056.1| GJ11556 [Drosophila virilis]
gi|194155214|gb|EDW70398.1| GJ11556 [Drosophila virilis]
Length = 627
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 45/70 (64%), Gaps = 15/70 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---------------TPGQSIPNNKSPN 46
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +++ SP
Sbjct: 335 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGISPG 394
Query: 47 QGAPAPTSAS 56
AP PT+A+
Sbjct: 395 YFAPGPTAAA 404
>gi|198465214|ref|XP_002134931.1| GA23525 [Drosophila pseudoobscura pseudoobscura]
gi|198150060|gb|EDY73558.1| GA23525 [Drosophila pseudoobscura pseudoobscura]
Length = 590
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 45/70 (64%), Gaps = 15/70 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---------------TPGQSIPNNKSPN 46
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +++ SP
Sbjct: 298 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGISPG 357
Query: 47 QGAPAPTSAS 56
AP PT+A+
Sbjct: 358 YFAPGPTAAA 367
>gi|195128971|ref|XP_002008932.1| GI11537 [Drosophila mojavensis]
gi|193920541|gb|EDW19408.1| GI11537 [Drosophila mojavensis]
Length = 614
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 45/70 (64%), Gaps = 15/70 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---------------TPGQSIPNNKSPN 46
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +++ SP
Sbjct: 319 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGISPG 378
Query: 47 QGAPAPTSAS 56
AP PT+A+
Sbjct: 379 YFAPGPTAAA 388
>gi|426236847|ref|XP_004012377.1| PREDICTED: uncharacterized protein LOC101106271 [Ovis aries]
Length = 246
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 44/63 (69%), Gaps = 10/63 (15%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK--------TPGQSIPNNKS--PNQGAPA 51
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK PG IP N S P+ G P
Sbjct: 161 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKMLSHPSPGNPGYMIPCNCSAWPSPGLPP 220
Query: 52 PTS 54
P +
Sbjct: 221 PLA 223
>gi|242007459|ref|XP_002424557.1| predicted protein [Pediculus humanus corporis]
gi|212508000|gb|EEB11819.1| predicted protein [Pediculus humanus corporis]
Length = 264
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/34 (97%), Positives = 34/34 (100%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
MEKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT
Sbjct: 56 MEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKT 89
>gi|195590202|ref|XP_002084835.1| GD12629 [Drosophila simulans]
gi|194196844|gb|EDX10420.1| GD12629 [Drosophila simulans]
Length = 573
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 15/70 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---------------TPGQSIPNNKSPN 46
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +++ +P
Sbjct: 293 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMTYPSVPVEALRAGITPG 352
Query: 47 QGAPAPTSAS 56
AP PT+A+
Sbjct: 353 YFAPGPTAAA 362
>gi|195427297|ref|XP_002061713.1| GK17144 [Drosophila willistoni]
gi|194157798|gb|EDW72699.1| GK17144 [Drosophila willistoni]
Length = 618
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 15/70 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---------------TPGQSIPNNKSPN 46
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +++ +P
Sbjct: 334 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGITPG 393
Query: 47 QGAPAPTSAS 56
AP PT+A+
Sbjct: 394 YFAPGPTAAA 403
>gi|21357781|ref|NP_648695.1| Sox21b, isoform A [Drosophila melanogaster]
gi|442632264|ref|NP_001261828.1| Sox21b, isoform B [Drosophila melanogaster]
gi|16197817|gb|AAL13542.1| GH07353p [Drosophila melanogaster]
gi|23093490|gb|AAF49754.2| Sox21b, isoform A [Drosophila melanogaster]
gi|220945316|gb|ACL85201.1| Sox21b-PA [synthetic construct]
gi|220952556|gb|ACL88821.1| Sox21b-PA [synthetic construct]
gi|440215767|gb|AGB94521.1| Sox21b, isoform B [Drosophila melanogaster]
Length = 571
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 15/70 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---------------TPGQSIPNNKSPN 46
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +++ +P
Sbjct: 293 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGITPG 352
Query: 47 QGAPAPTSAS 56
AP PT+A+
Sbjct: 353 YFAPGPTAAA 362
>gi|195327518|ref|XP_002030465.1| GM24556 [Drosophila sechellia]
gi|194119408|gb|EDW41451.1| GM24556 [Drosophila sechellia]
Length = 575
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 15/70 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---------------TPGQSIPNNKSPN 46
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +++ +P
Sbjct: 293 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGITPG 352
Query: 47 QGAPAPTSAS 56
AP PT+A+
Sbjct: 353 YFAPGPTAAA 362
>gi|195494278|ref|XP_002094768.1| GE20028 [Drosophila yakuba]
gi|194180869|gb|EDW94480.1| GE20028 [Drosophila yakuba]
Length = 584
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 15/70 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---------------TPGQSIPNNKSPN 46
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +++ +P
Sbjct: 302 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGITPG 361
Query: 47 QGAPAPTSAS 56
AP PT+A+
Sbjct: 362 YFAPGPTAAA 371
>gi|194870742|ref|XP_001972712.1| GG13734 [Drosophila erecta]
gi|190654495|gb|EDV51738.1| GG13734 [Drosophila erecta]
Length = 581
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 15/70 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---------------TPGQSIPNNKSPN 46
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +++ +P
Sbjct: 296 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGITPG 355
Query: 47 QGAPAPTSAS 56
AP PT+A+
Sbjct: 356 YFAPGPTAAA 365
>gi|442632266|ref|NP_001261829.1| Sox21b, isoform C [Drosophila melanogaster]
gi|440215768|gb|AGB94522.1| Sox21b, isoform C [Drosophila melanogaster]
Length = 587
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 15/70 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---------------TPGQSIPNNKSPN 46
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +++ +P
Sbjct: 293 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGITPG 352
Query: 47 QGAPAPTSAS 56
AP PT+A+
Sbjct: 353 YFAPGPTAAA 362
>gi|194747992|ref|XP_001956433.1| GF25205 [Drosophila ananassae]
gi|190623715|gb|EDV39239.1| GF25205 [Drosophila ananassae]
Length = 611
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 45/70 (64%), Gaps = 15/70 (21%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---------------TPGQSIPNNKSPN 46
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK P +++ +P
Sbjct: 311 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGITPG 370
Query: 47 QGAPAPTSAS 56
AP PT+A+
Sbjct: 371 YFAPGPTAAA 380
>gi|357619728|gb|EHJ72187.1| Sox21b [Danaus plexippus]
Length = 201
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 112 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 144
>gi|259013336|ref|NP_001158377.1| SRY (sex determining region Y)-box 1/2/3-like [Saccoglossus
kowalevskii]
gi|32307765|gb|AAP79279.1| sox1/2/3 [Saccoglossus kowalevskii]
Length = 316
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 53/88 (60%), Gaps = 9/88 (10%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQ----SIPNNKSPNQGAPAPTSASN 57
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT + +P SP GAP +
Sbjct: 85 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLMKKDKYGLPGMISPGGGAPVQRAVDG 144
Query: 58 AFPSFPLPPYFANHGGGSHPHPLDSLSA 85
+PL Y +GG P D LSA
Sbjct: 145 M--QYPLNGYM--NGGYPMMQP-DQLSA 167
>gi|402902302|ref|XP_003914046.1| PREDICTED: transcription factor SOX-21 [Papio anubis]
Length = 265
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 42 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 74
>gi|392333468|ref|XP_001078360.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC306168
[Rattus norvegicus]
Length = 674
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 495 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 527
>gi|270008130|gb|EFA04578.1| Sox21b [Tribolium castaneum]
Length = 379
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 87 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 119
>gi|91083765|ref|XP_971967.1| PREDICTED: similar to Sox21b CG32139-PA [Tribolium castaneum]
Length = 398
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 87 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 119
>gi|242007461|ref|XP_002424558.1| transcription factor SOX-2, putative [Pediculus humanus corporis]
gi|212508001|gb|EEB11820.1| transcription factor SOX-2, putative [Pediculus humanus corporis]
Length = 381
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 96 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 128
>gi|431906930|gb|ELK11050.1| Transcription factor SOX-21 [Pteropus alecto]
Length = 584
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 361 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 393
>gi|301766534|ref|XP_002918684.1| PREDICTED: hypothetical protein LOC100466158 [Ailuropoda
melanoleuca]
Length = 571
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 433 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 465
>gi|38649222|gb|AAH63054.1| Sox21 protein, partial [Mus musculus]
Length = 416
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 204 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 236
>gi|327267853|ref|XP_003218713.1| PREDICTED: transcription factor SOX-21-like [Anolis carolinensis]
Length = 283
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|57770394|ref|NP_001009888.1| transcription factor Sox-21-B [Danio rerio]
gi|82203135|sp|Q6RVD7.1|SX21B_DANRE RecName: Full=Transcription factor Sox-21-B; AltName:
Full=SRY-box containing gene 21b
gi|44829157|gb|AAS47833.1| Sox21b [Danio rerio]
gi|63101902|gb|AAH95366.1| SRY-box containing gene 21 b [Danio rerio]
Length = 245
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|358414827|ref|XP_003582926.1| PREDICTED: transcription factor SOX-21-like [Bos taurus]
Length = 262
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|195427299|ref|XP_002061714.1| GK17145 [Drosophila willistoni]
gi|194157799|gb|EDW72700.1| GK17145 [Drosophila willistoni]
Length = 428
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT +S
Sbjct: 186 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKS 222
>gi|47227024|emb|CAG05916.1| unnamed protein product [Tetraodon nigroviridis]
Length = 248
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|195161046|ref|XP_002021381.1| GL24833 [Drosophila persimilis]
gi|194118494|gb|EDW40537.1| GL24833 [Drosophila persimilis]
Length = 616
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT +S
Sbjct: 389 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKS 425
>gi|29244252|ref|NP_808421.1| transcription factor SOX-21 [Mus musculus]
gi|62901090|sp|Q811W0.1|SOX21_MOUSE RecName: Full=Transcription factor SOX-21
gi|28274770|gb|AAN60055.1| HMG-box protein SOX21 [Mus musculus]
gi|46812681|gb|AAH69176.1| SRY-box containing gene 21 [Mus musculus]
gi|223461771|gb|AAI47566.1| SRY-box containing gene 21 [Mus musculus]
gi|223461908|gb|AAI47557.1| SRY-box containing gene 21 [Mus musculus]
Length = 276
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|395833191|ref|XP_003789625.1| PREDICTED: transcription factor SOX-21 [Otolemur garnettii]
Length = 275
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|197111720|gb|ACH43024.1| Sox3 [Amphiprion melanopus]
Length = 300
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/33 (96%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK KT
Sbjct: 80 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKT 112
>gi|5902108|ref|NP_009015.1| transcription factor SOX-21 [Homo sapiens]
gi|302565644|ref|NP_001180661.1| transcription factor SOX-21 [Macaca mulatta]
gi|296188838|ref|XP_002742525.1| PREDICTED: transcription factor SOX-21 isoform 1 [Callithrix
jacchus]
gi|297694280|ref|XP_002824412.1| PREDICTED: transcription factor SOX-21 isoform 1 [Pongo abelii]
gi|311266448|ref|XP_003131095.1| PREDICTED: transcription factor SOX-21-like [Sus scrofa]
gi|426375782|ref|XP_004054698.1| PREDICTED: transcription factor SOX-21 [Gorilla gorilla gorilla]
gi|6831690|sp|Q9Y651.1|SOX21_HUMAN RecName: Full=Transcription factor SOX-21; AltName: Full=SOX-A
gi|4008103|gb|AAC95381.1| DNA-binding protein SOX21 [Homo sapiens]
gi|94963087|gb|AAI11585.1| SOX21 protein [synthetic construct]
gi|119629351|gb|EAX08946.1| SRY (sex determining region Y)-box 21 [Homo sapiens]
gi|208968781|dbj|BAG74229.1| SRY (sex determining region Y)-box 21 [synthetic construct]
Length = 276
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|410896764|ref|XP_003961869.1| PREDICTED: transcription factor Sox-21-B-like [Takifugu rubripes]
Length = 248
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|109121076|ref|XP_001084162.1| PREDICTED: transcription factor SOX-21-like isoform 1 [Macaca
mulatta]
Length = 254
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|348519631|ref|XP_003447333.1| PREDICTED: transcription factor Sox-21-B-like [Oreochromis
niloticus]
Length = 248
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|259013195|ref|NP_001158346.1| SRY-box containing gene 21 [Oryzias latipes]
gi|227336656|gb|ACP21275.1| SRY-box containing gene 21 [Oryzias latipes]
Length = 244
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|126337343|ref|XP_001366447.1| PREDICTED: transcription factor SOX-21-like isoform 1
[Monodelphis domestica]
Length = 275
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|17979020|gb|AAL49967.1| HMG-box protein [Mus musculus]
Length = 276
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|395527412|ref|XP_003765841.1| PREDICTED: transcription factor SOX-21 [Sarcophilus harrisii]
Length = 240
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|224043146|ref|XP_002196901.1| PREDICTED: transcription factor SOX-21, partial [Taeniopygia
guttata]
Length = 247
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 19 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 51
>gi|33415926|gb|AAQ18500.1| transcription factor Sox21 [Takifugu rubripes]
Length = 248
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|359071088|ref|XP_003586771.1| PREDICTED: transcription factor SOX-21-like [Bos taurus]
Length = 229
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 78 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 110
>gi|301619907|ref|XP_002939326.1| PREDICTED: transcription factor Sox-21 [Xenopus (Silurana)
tropicalis]
Length = 271
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|332216667|ref|XP_003257471.1| PREDICTED: transcription factor SOX-21 [Nomascus leucogenys]
Length = 152
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|260796049|ref|XP_002593017.1| hypothetical protein BRAFLDRAFT_263176 [Branchiostoma floridae]
gi|110294134|gb|ABG66528.1| SoxB2 [Branchiostoma floridae]
gi|229278241|gb|EEN49028.1| hypothetical protein BRAFLDRAFT_263176 [Branchiostoma floridae]
Length = 249
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 30/120 (25%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT----------PGQSIPNNKSP---NQG 48
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P IP+ P + G
Sbjct: 53 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNLLKNKDRYAFPIPCIPSADDPMMRSMG 112
Query: 49 APAPTSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHY-FGSPFDAMNFSK 107
A A T+ FP+ G S +D + A +PP P+ GSP + ++SK
Sbjct: 113 A-AVTTQGTGFPT-----------GLS----IDKMRAFFPPTTSPYLDGGSPLGSTSYSK 156
>gi|25091342|sp|Q9W7R5.1|SOX21_CHICK RecName: Full=Transcription factor SOX-21
gi|4757359|dbj|BAA77266.1| SOX21 [Gallus gallus]
Length = 280
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|324503413|gb|ADY41486.1| Transcription factor Sox-2 [Ascaris suum]
Length = 329
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 49/79 (62%), Gaps = 9/79 (11%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK----PKTPGQSIPNN-----KSPNQGAPAP 52
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK PK G S+P + K+ N P
Sbjct: 106 EKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKNIPKKNGISMPASFLDPIKTQNLYQPMA 165
Query: 53 TSASNAFPSFPLPPYFANH 71
TS S PYF ++
Sbjct: 166 TSWQQPITSVSTAPYFDSY 184
>gi|288557317|ref|NP_001165684.1| transcription factor Sox-21 [Xenopus laevis]
gi|239977607|sp|B0ZTE1.1|SOX21_XENLA RecName: Full=Transcription factor Sox-21; AltName: Full=SRY (sex
determining region Y)-box 21
gi|166836040|gb|ABY90180.1| SRY-box containing gene 21 [Xenopus laevis]
Length = 262
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/33 (96%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMK+HPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKDHPDYKYRPRRKPKT 85
>gi|442632261|ref|NP_001261827.1| Sox21a, isoform B [Drosophila melanogaster]
gi|440215766|gb|AGB94520.1| Sox21a, isoform B [Drosophila melanogaster]
Length = 407
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT +S
Sbjct: 166 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKS 202
>gi|206583370|gb|ACI15224.1| SoxB2 [Branchiostoma belcheri]
Length = 248
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 63/118 (53%), Gaps = 27/118 (22%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT----------PGQSIPNNKSP-NQGAP 50
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P IP+ P +
Sbjct: 53 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNLLKNKDRYAFPIPCIPSADDPMMRSMG 112
Query: 51 APTSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHY-FGSPFDAMNFSK 107
A T+ FP+ G S +D + A +PP P+ GSP + ++SK
Sbjct: 113 AVTTQGTGFPT-----------GLS----IDKMRAFFPPTTSPYLDGGSPLGSTSYSK 155
>gi|149050202|gb|EDM02526.1| rCG37201 [Rattus norvegicus]
Length = 176
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>gi|380805991|gb|AFE74871.1| transcription factor SOX-21, partial [Macaca mulatta]
Length = 110
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 28 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 60
>gi|198465210|ref|XP_001353546.2| GA20281 [Drosophila pseudoobscura pseudoobscura]
gi|198150058|gb|EAL31058.2| GA20281 [Drosophila pseudoobscura pseudoobscura]
Length = 396
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT +S
Sbjct: 165 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKS 201
>gi|281347401|gb|EFB22985.1| hypothetical protein PANDA_007191 [Ailuropoda melanoleuca]
Length = 181
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 48 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 80
>gi|193082995|ref|NP_001122329.1| HMG transcription factor SoxB2 [Ciona intestinalis]
gi|70571235|dbj|BAE06705.1| transcription factor protein [Ciona intestinalis]
Length = 318
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 75 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 107
>gi|21357779|ref|NP_648694.1| Sox21a, isoform A [Drosophila melanogaster]
gi|7294410|gb|AAF49756.1| Sox21a, isoform A [Drosophila melanogaster]
gi|66571134|gb|AAY51532.1| IP01552p [Drosophila melanogaster]
gi|220943374|gb|ACL84230.1| Sox21a-PA [synthetic construct]
gi|220953338|gb|ACL89212.1| Sox21a-PA [synthetic construct]
Length = 388
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT +S
Sbjct: 166 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKS 202
>gi|357607461|gb|EHJ65502.1| hypothetical protein KGM_19699 [Danaus plexippus]
Length = 222
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/34 (94%), Positives = 33/34 (97%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
MEKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK
Sbjct: 55 MEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKA 88
>gi|268580121|ref|XP_002645043.1| C. briggsae CBR-SOX-2 protein [Caenorhabditis briggsae]
Length = 286
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT----PGQSIPNNKSPNQGAPAPTSASN 57
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRK K+ G IP + PT ++N
Sbjct: 105 DKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKSINKKNGAPIPFGNLETKAPTYPTISNN 164
Query: 58 AFPS------FPLPPYFANHGGGSH 76
P+ F PY+++ G H
Sbjct: 165 WNPTNQYIDQFRFAPYYSSSGVMDH 189
>gi|195590200|ref|XP_002084834.1| GD12630 [Drosophila simulans]
gi|194196843|gb|EDX10419.1| GD12630 [Drosophila simulans]
Length = 385
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT +S
Sbjct: 166 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKS 202
>gi|157111608|ref|XP_001651644.1| sex-determining region y protein, sry [Aedes aegypti]
gi|108883818|gb|EAT48043.1| AAEL000864-PA [Aedes aegypti]
Length = 190
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/33 (96%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT
Sbjct: 42 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKT 74
>gi|324518502|gb|ADY47121.1| Transcription factor Sox-14 [Ascaris suum]
Length = 279
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/32 (96%), Positives = 32/32 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK
Sbjct: 115 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPK 146
>gi|195494275|ref|XP_002094767.1| GE20029 [Drosophila yakuba]
gi|194180868|gb|EDW94479.1| GE20029 [Drosophila yakuba]
Length = 397
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT +S
Sbjct: 174 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKS 210
>gi|195378568|ref|XP_002048055.1| GJ11557 [Drosophila virilis]
gi|194155213|gb|EDW70397.1| GJ11557 [Drosophila virilis]
Length = 376
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT +S
Sbjct: 140 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKS 176
>gi|195015705|ref|XP_001984256.1| GH16347 [Drosophila grimshawi]
gi|193897738|gb|EDV96604.1| GH16347 [Drosophila grimshawi]
Length = 377
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT +S
Sbjct: 144 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKS 180
>gi|393904267|gb|EJD73681.1| hypothetical protein LOAG_18907 [Loa loa]
Length = 301
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 128 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 160
>gi|345324354|ref|XP_001512271.2| PREDICTED: transcription factor SOX-21-like, partial
[Ornithorhynchus anatinus]
Length = 110
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 31 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 63
>gi|307192230|gb|EFN75532.1| Transcription factor SOX-2 [Harpegnathos saltator]
Length = 484
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 194 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKT 226
>gi|45383968|ref|NP_990519.1| transcription factor SOX-2 [Gallus gallus]
gi|224060771|ref|XP_002196639.1| PREDICTED: transcription factor SOX-2 [Taeniopygia guttata]
gi|1351090|sp|P48430.1|SOX2_CHICK RecName: Full=Transcription factor SOX-2; Short=cSox2; AltName:
Full=delta EF2a
gi|595495|gb|AAB09662.1| Sox2 transcription factor [Gallus gallus]
gi|29501192|dbj|BAC67545.1| SOX2 [Gallus gallus]
Length = 315
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 84 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 116
>gi|322793662|gb|EFZ17100.1| hypothetical protein SINV_03757 [Solenopsis invicta]
Length = 479
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT I +K P G+ A
Sbjct: 204 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKT---LIKKDKFPLGGSVAGVGG 254
>gi|195327516|ref|XP_002030464.1| GM24557 [Drosophila sechellia]
gi|194119407|gb|EDW41450.1| GM24557 [Drosophila sechellia]
Length = 386
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT
Sbjct: 166 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKT 198
>gi|170577174|ref|XP_001893910.1| HMG box family protein [Brugia malayi]
gi|158599793|gb|EDP37253.1| HMG box family protein [Brugia malayi]
Length = 304
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 126 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 158
>gi|849044|dbj|BAA09168.1| SOX-2 [Gallus gallus]
Length = 312
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 81 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 113
>gi|344247524|gb|EGW03628.1| Transcription factor SOX-2 [Cricetulus griseus]
Length = 273
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 42 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 74
>gi|17567587|ref|NP_510439.1| Protein SOX-3 [Caenorhabditis elegans]
gi|3877011|emb|CAA93665.1| Protein SOX-3 [Caenorhabditis elegans]
Length = 212
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 93 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 125
>gi|391338071|ref|XP_003743385.1| PREDICTED: uncharacterized protein LOC100898556 [Metaseiulus
occidentalis]
Length = 531
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 219 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKT 251
>gi|126723918|gb|ABO26872.1| Sox2 [Oreochromis mossambicus]
Length = 199
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 20 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 52
>gi|449277639|gb|EMC85733.1| Transcription factor SOX-2, partial [Columba livia]
Length = 301
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 84 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 116
>gi|308488137|ref|XP_003106263.1| CRE-SOX-3 protein [Caenorhabditis remanei]
gi|308254253|gb|EFO98205.1| CRE-SOX-3 protein [Caenorhabditis remanei]
Length = 212
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG---QSIPNNKSPNQGAPAPTSASNA 58
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+ Q N P PA + S+A
Sbjct: 93 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKSSNLKQQPRLNIAMPALTPPALFNYSSA 152
Query: 59 FPSF 62
F S
Sbjct: 153 FDSL 156
>gi|268581711|ref|XP_002645839.1| C. briggsae CBR-SOX-3 protein [Caenorhabditis briggsae]
Length = 213
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 94 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 126
>gi|195128969|ref|XP_002008931.1| GI11538 [Drosophila mojavensis]
gi|193920540|gb|EDW19407.1| GI11538 [Drosophila mojavensis]
Length = 379
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT +S
Sbjct: 146 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKS 182
>gi|194747994|ref|XP_001956434.1| GF25206 [Drosophila ananassae]
gi|190623716|gb|EDV39240.1| GF25206 [Drosophila ananassae]
Length = 355
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT +S
Sbjct: 166 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKS 202
>gi|410896618|ref|XP_003961796.1| PREDICTED: transcription factor Sox-1a-like [Takifugu rubripes]
gi|33415912|gb|AAQ18493.1| transcription factor Sox1a [Takifugu rubripes]
Length = 343
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK K+
Sbjct: 82 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKS 114
>gi|40642791|emb|CAD58839.1| SoxB2 protein [Ciona intestinalis]
Length = 344
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 57 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 89
>gi|341884376|gb|EGT40311.1| CBN-SOX-3 protein [Caenorhabditis brenneri]
Length = 212
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 93 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 125
>gi|344222025|gb|ABB00909.2| Sox-2 [Sus scrofa]
Length = 250
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 19 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 51
>gi|312096920|ref|XP_003148818.1| HMG box family protein [Loa loa]
Length = 211
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 128 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 160
>gi|47226895|emb|CAG05787.1| unnamed protein product [Tetraodon nigroviridis]
Length = 343
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK K+
Sbjct: 82 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKS 114
>gi|213510998|ref|NP_001135190.1| Transcription factor Sox-2 [Salmo salar]
gi|209151035|gb|ACI33057.1| Transcription factor Sox-2 [Salmo salar]
Length = 315
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 83 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 115
>gi|354483794|ref|XP_003504077.1| PREDICTED: transcription factor SOX-2-like [Cricetulus griseus]
Length = 287
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 56 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 88
>gi|214010979|gb|ACJ61262.1| Sox2 [Epinephelus coioides]
gi|214010983|gb|ACJ61264.1| Sox2 [Epinephelus coioides]
Length = 309
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 85 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 117
>gi|158298957|ref|XP_319093.4| AGAP009957-PA [Anopheles gambiae str. PEST]
gi|157014137|gb|EAA13970.5| AGAP009957-PA [Anopheles gambiae str. PEST]
Length = 333
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 70 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKT 102
>gi|355559841|gb|EHH16569.1| hypothetical protein EGK_11863 [Macaca mulatta]
Length = 259
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 28 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 60
>gi|110294132|gb|ABG66527.1| SoxB1 [Branchiostoma floridae]
Length = 322
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 39/55 (70%), Gaps = 9/55 (16%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT---------PGQSIPNNKSPNQ 47
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT PG I N +P Q
Sbjct: 89 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYSLPGGLIAANGAPVQ 143
>gi|351694891|gb|EHA97809.1| Transcription factor SOX-2 [Heterocephalus glaber]
Length = 273
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 42 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 74
>gi|431838812|gb|ELK00741.1| Transcription factor SOX-2 [Pteropus alecto]
Length = 273
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 42 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 74
>gi|194870738|ref|XP_001972711.1| GG13735 [Drosophila erecta]
gi|190654494|gb|EDV51737.1| GG13735 [Drosophila erecta]
Length = 403
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT
Sbjct: 178 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKT 210
>gi|440908703|gb|ELR58696.1| Transcription factor SOX-2, partial [Bos grunniens mutus]
Length = 256
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 25 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 57
>gi|54261783|ref|NP_998283.1| transcription factor Sox-2 [Danio rerio]
gi|82186099|sp|Q6P0E1.1|SOX2_DANRE RecName: Full=Transcription factor Sox-2
gi|34784528|gb|AAH56743.1| SRY-box containing gene 2 [Danio rerio]
gi|41351030|gb|AAH65656.1| SRY-box containing gene 2 [Danio rerio]
gi|82568656|dbj|BAE48583.1| transcription factor SOX2 [Danio rerio]
Length = 315
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 83 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 115
>gi|148228817|ref|NP_001081691.1| transcription factor Sox-2 [Xenopus laevis]
gi|6175039|sp|O42569.1|SOX2_XENLA RecName: Full=Transcription factor Sox-2; Short=XSox2;
Short=XlSox-2; AltName: Full=SRY (sex determining region
Y)-box 2
gi|2232293|gb|AAB62821.1| XlSOX-2 [Xenopus laevis]
Length = 311
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 82 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 114
>gi|74203451|dbj|BAE20882.1| unnamed protein product [Mus musculus]
Length = 268
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 37 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 69
>gi|126723916|gb|ABO26871.1| Sox2 [Oreochromis karongae]
Length = 221
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 23 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 55
>gi|444726394|gb|ELW66929.1| Transcription factor SOX-2 [Tupaia chinensis]
Length = 235
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 42 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 74
>gi|355721310|gb|AES07220.1| SRY -box 2 [Mustela putorius furo]
Length = 274
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 44 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 76
>gi|49899011|gb|AAH76717.1| Unknown (protein for MGC:79935) [Xenopus laevis]
gi|283445050|gb|ADB20417.1| sex-determining region Y-box 2 [Xenopus laevis]
Length = 311
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 82 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 114
>gi|260796057|ref|XP_002593021.1| hypothetical protein BRAFLDRAFT_212685 [Branchiostoma floridae]
gi|229278245|gb|EEN49032.1| hypothetical protein BRAFLDRAFT_212685 [Branchiostoma floridae]
Length = 289
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 39/55 (70%), Gaps = 9/55 (16%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT---------PGQSIPNNKSPNQ 47
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT PG I N +P Q
Sbjct: 56 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYSLPGGLIAANGAPVQ 110
>gi|427786707|gb|JAA58805.1| Putative sry sex determining region y-box 2 [Rhipicephalus
pulchellus]
Length = 283
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/32 (96%), Positives = 32/32 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK
Sbjct: 81 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPK 112
>gi|197359126|gb|ACH69779.1| SRY-box containing protein 2 [Anabarilius grahami]
Length = 230
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 39 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 71
>gi|47497984|ref|NP_998869.1| transcription factor Sox-2 [Xenopus (Silurana) tropicalis]
gi|82185672|sp|Q6NVN0.1|SOX2_XENTR RecName: Full=Transcription factor Sox-2; AltName: Full=SRY (sex
determining region Y)-box 2
gi|45709781|gb|AAH67975.1| SRY (sex determining region Y)-box 2 [Xenopus (Silurana)
tropicalis]
gi|89268679|emb|CAJ82651.1| SRY (sex determining region Y)-box 2 [Xenopus (Silurana)
tropicalis]
Length = 311
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 82 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 114
>gi|432855156|ref|XP_004068100.1| PREDICTED: transcription factor SOX-2-like [Oryzias latipes]
gi|227336632|gb|ACP21263.1| SRY-box containing gene 2 [Oryzias latipes]
Length = 322
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 85 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 117
>gi|426219347|ref|XP_004003887.1| PREDICTED: transcription factor SOX-2 [Ovis aries]
Length = 407
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 203 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 235
>gi|3064136|gb|AAC14215.1| Sry-related HMG factor [Xenopus laevis]
Length = 311
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 82 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 114
>gi|301772916|ref|XP_002921878.1| PREDICTED: transcription factor SOX-2-like [Ailuropoda
melanoleuca]
Length = 287
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 56 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 88
>gi|332024304|gb|EGI64503.1| Transcription factor SOX-2 [Acromyrmex echinatior]
Length = 483
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 202 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKT 234
>gi|312371368|gb|EFR19576.1| hypothetical protein AND_22205 [Anopheles darlingi]
Length = 187
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/32 (100%), Positives = 32/32 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK
Sbjct: 131 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 162
>gi|410932377|ref|XP_003979570.1| PREDICTED: transcription factor SOX-2-like [Takifugu rubripes]
gi|33415916|gb|AAQ18495.1| transcription factor Sox2 [Takifugu rubripes]
Length = 322
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 85 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 117
>gi|313233404|emb|CBY24519.1| unnamed protein product [Oikopleura dioica]
Length = 419
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK-PKTPGQSIPNNKSPNQGAPAP 52
EK+P+IDEAKRLRA HMK+HPDYKYRPRRK P+ PGQ P+ + P Q P P
Sbjct: 109 EKKPYIDEAKRLRAQHMKDHPDYKYRPRRKTPQKPGQGKPDFR-PGQHLPGP 159
>gi|51599125|gb|AAU08213.1| transcription factor Sox2 [Acipenser schrenckii]
Length = 303
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 83 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 115
>gi|348539848|ref|XP_003457401.1| PREDICTED: transcription factor SOX-2-like [Oreochromis niloticus]
Length = 322
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 85 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 117
>gi|126723912|gb|ABO26869.1| Sox2 [Oreochromis niloticus]
gi|126723914|gb|ABO26870.1| Sox2 [Oreochromis aureus]
Length = 294
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 72 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 104
>gi|402578315|gb|EJW72269.1| HMG box family protein, partial [Wuchereria bancrofti]
Length = 367
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK K
Sbjct: 173 EKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTK 204
>gi|345494294|ref|XP_001606557.2| PREDICTED: hypothetical protein LOC100122949 [Nasonia vitripennis]
Length = 402
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EK PFIDEAKRLRA+HMKEHPDYKYRPRRKPKT
Sbjct: 105 EKLPFIDEAKRLRALHMKEHPDYKYRPRRKPKT 137
>gi|373938721|gb|AEY79522.1| Sox2 [Capra hircus]
Length = 320
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 89 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 121
>gi|339246705|ref|XP_003374986.1| SOX-1 protein [Trichinella spiralis]
gi|316971748|gb|EFV55488.1| SOX-1 protein [Trichinella spiralis]
Length = 313
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 32/32 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLR++HMKEHPDYKYRPRRKPK
Sbjct: 81 EKRPFIDEAKRLRSVHMKEHPDYKYRPRRKPK 112
>gi|47206548|emb|CAF91617.1| unnamed protein product [Tetraodon nigroviridis]
Length = 322
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 85 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 117
>gi|281339286|gb|EFB14870.1| hypothetical protein PANDA_010807 [Ailuropoda melanoleuca]
Length = 283
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 52 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 84
>gi|338716078|ref|XP_003363393.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-2 [Equus
caballus]
Length = 314
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 83 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 115
>gi|189069149|dbj|BAG35487.1| unnamed protein product [Homo sapiens]
Length = 317
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 86 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 118
>gi|108744039|gb|ABG02393.1| sox2 [Bubalus bubalis]
Length = 148
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 20 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 52
>gi|91083767|ref|XP_972019.1| PREDICTED: similar to AGAP010919-PA [Tribolium castaneum]
gi|270008129|gb|EFA04577.1| dichaete [Tribolium castaneum]
Length = 217
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 56/107 (52%), Gaps = 29/107 (27%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFP 60
++KRPFIDEAKRLRA+HMK+HPDYKYRPRRKPK P P FP
Sbjct: 64 VDKRPFIDEAKRLRALHMKQHPDYKYRPRRKPKGP-------------LPTALKTGVGFP 110
Query: 61 SFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSK 107
+ L YF+ P+++L++ YP YF FD K
Sbjct: 111 NLQL-QYFS---------PMEALTSPYP------YFNPAFDMSRMEK 141
>gi|261363582|gb|ACX71866.1| Sox2, partial [Trachinotus blochii]
Length = 309
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 85 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 117
>gi|291400256|ref|XP_002716497.1| PREDICTED: SRY (sex determining region Y)-box 2-like [Oryctolagus
cuniculus]
Length = 328
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 97 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 129
>gi|259013436|ref|NP_001158461.1| Sox14/21-like protein [Saccoglossus kowalevskii]
gi|197320519|gb|ACH68421.1| Sox14/21-like protein [Saccoglossus kowalevskii]
Length = 244
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 53 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 85
>gi|127140986|ref|NP_035573.3| transcription factor SOX-2 [Mus musculus]
gi|157821697|ref|NP_001102651.1| SRY (sex determining region Y)-box 2 [Rattus norvegicus]
gi|1209430|emb|CAA63847.1| SOX2 protein [Mus musculus]
gi|30024608|dbj|BAC75668.1| transcriptional factor SOX2 [Mus musculus]
gi|34784492|gb|AAH57574.1| Sox2 protein [Mus musculus]
gi|148703104|gb|EDL35051.1| SRY-box containing gene 2 [Mus musculus]
gi|149048707|gb|EDM01248.1| rCG41622 [Rattus norvegicus]
Length = 319
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 120
>gi|380815866|gb|AFE79807.1| transcription factor SOX-2 [Macaca mulatta]
Length = 319
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 120
>gi|363418475|gb|AEW23225.1| sex determining region Y-box 2 [Bubalus bubalis]
Length = 321
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 90 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 122
>gi|28195386|ref|NP_003097.1| transcription factor SOX-2 [Homo sapiens]
gi|1351091|sp|P48431.1|SOX2_HUMAN RecName: Full=Transcription factor SOX-2
gi|15530270|gb|AAH13923.1| SRY (sex determining region Y)-box 2 [Homo sapiens]
gi|119598760|gb|EAW78354.1| SRY (sex determining region Y)-box 2 [Homo sapiens]
gi|167773497|gb|ABZ92183.1| SRY (sex determining region Y)-box 2 [synthetic construct]
gi|208968779|dbj|BAG74228.1| SRY (sex determining region Y)-box 2 [synthetic construct]
Length = 317
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 86 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 118
>gi|402860851|ref|XP_003894832.1| PREDICTED: transcription factor SOX-2-like [Papio anubis]
Length = 319
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 120
>gi|345796559|ref|XP_545216.3| PREDICTED: transcription factor SOX-2 [Canis lupus familiaris]
Length = 324
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 93 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 125
>gi|169627099|gb|ACA58281.1| sex determining region Y-box 2 [Sus scrofa]
Length = 319
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 120
>gi|291045108|ref|NP_001166918.1| transcription factor SOX-2 [Felis catus]
gi|264670121|gb|ACY72345.1| sex determining region Y-box 2 [Felis catus]
Length = 321
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 90 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 122
>gi|219283249|ref|NP_001136412.1| transcription factor SOX-2 [Macaca mulatta]
gi|297672596|ref|XP_002814367.1| PREDICTED: transcription factor SOX-2-like [Pongo abelii]
gi|332214894|ref|XP_003256569.1| PREDICTED: transcription factor SOX-2 [Nomascus leucogenys]
gi|395855379|ref|XP_003800142.1| PREDICTED: transcription factor SOX-2 [Otolemur garnettii]
gi|217035845|gb|ACJ74395.1| sex determining region Y-box 2 [Macaca mulatta]
Length = 319
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 120
>gi|157428050|ref|NP_001098933.1| transcription factor SOX-2 [Bos taurus]
gi|1711465|sp|P54231.1|SOX2_SHEEP RecName: Full=Transcription factor SOX-2
gi|1261961|emb|CAA65725.1| SOX-2 protein [Ovis aries]
gi|124829013|gb|AAI33459.1| SOX2 protein [Bos taurus]
gi|296491250|tpg|DAA33313.1| TPA: SRY (sex determining region Y)-box 2 [Bos taurus]
Length = 320
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 89 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 121
>gi|178056725|ref|NP_001116669.1| transcription factor SOX-2 [Sus scrofa]
gi|170293289|gb|ACB12693.1| sex determining region Y box 2 [Sus scrofa]
Length = 319
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 120
>gi|426343024|ref|XP_004038119.1| PREDICTED: transcription factor SOX-2 [Gorilla gorilla gorilla]
Length = 507
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 305 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 337
>gi|6094324|sp|P48432.2|SOX2_MOUSE RecName: Full=Transcription factor SOX-2
gi|3419873|gb|AAC31791.1| high mobility group box protein SOX2 [Mus musculus]
Length = 319
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 120
>gi|380016544|ref|XP_003692242.1| PREDICTED: uncharacterized protein LOC100872761 [Apis florea]
Length = 330
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 56 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 88
>gi|110760893|ref|XP_001121910.1| PREDICTED: hypothetical protein LOC726150 [Apis mellifera]
Length = 332
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 56 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 88
>gi|854182|emb|CAA83435.1| sox-2 [Homo sapiens]
Length = 321
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 90 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 122
>gi|383864572|ref|XP_003707752.1| PREDICTED: uncharacterized protein LOC100879499 [Megachile
rotundata]
Length = 325
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 56 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 88
>gi|332018674|gb|EGI59246.1| Transcription factor SOX-21 [Acromyrmex echinatior]
Length = 366
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFID+AKRLRA HMKEHPDYKYRPRRKPKT
Sbjct: 87 EKRPFIDQAKRLRAQHMKEHPDYKYRPRRKPKT 119
>gi|332818471|ref|XP_516895.3| PREDICTED: transcription factor SOX-2 [Pan troglodytes]
Length = 319
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 120
>gi|340721033|ref|XP_003398931.1| PREDICTED: hypothetical protein LOC100647305 [Bombus terrestris]
Length = 326
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 56 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 88
>gi|350416780|ref|XP_003491099.1| PREDICTED: hypothetical protein LOC100745146 [Bombus impatiens]
Length = 326
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 56 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 88
>gi|184240|gb|AAA35997.1| putative, partial [Homo sapiens]
Length = 327
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 96 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 128
>gi|442758865|gb|JAA71591.1| Putative hmg-box transcription factor [Ixodes ricinus]
Length = 279
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK
Sbjct: 81 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKV 113
>gi|390474844|ref|XP_002807611.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-2-like
[Callithrix jacchus]
Length = 574
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 343 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 375
>gi|356995557|dbj|BAL14715.1| transcription factor SOX2 [Cynops pyrrhogaster]
Length = 322
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 81 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 113
>gi|432096885|gb|ELK27462.1| Transcription factor SOX-2 [Myotis davidii]
Length = 185
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 42 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 74
>gi|468792|emb|CAA50466.1| soxA [Homo sapiens]
Length = 76
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/33 (96%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK KT
Sbjct: 42 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKT 74
>gi|328704298|ref|XP_003242448.1| PREDICTED: hypothetical protein LOC100164548 [Acyrthosiphon pisum]
Length = 473
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 192 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKT 224
>gi|156554841|ref|XP_001606472.1| PREDICTED: transcription factor SOX-14-like [Nasonia vitripennis]
Length = 351
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 56 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 88
>gi|307166303|gb|EFN60485.1| Transcription factor SOX-21 [Camponotus floridanus]
Length = 386
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFID+AKRLRA HMKEHPDYKYRPRRKPKT
Sbjct: 97 EKRPFIDQAKRLRAQHMKEHPDYKYRPRRKPKT 129
>gi|241100883|ref|XP_002409776.1| sox14, putative [Ixodes scapularis]
gi|215492806|gb|EEC02447.1| sox14, putative [Ixodes scapularis]
Length = 280
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK
Sbjct: 81 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKV 113
>gi|443697594|gb|ELT97997.1| hypothetical protein CAPTEDRAFT_162284, partial [Capitella teleta]
Length = 230
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMK+HPDYKYRPRRKPK+
Sbjct: 90 EKRPFIDEAKRLRALHMKDHPDYKYRPRRKPKS 122
>gi|345491074|ref|XP_003426523.1| PREDICTED: transcription factor SOX-2-like [Nasonia vitripennis]
Length = 478
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 211 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 243
>gi|193627270|ref|XP_001952775.1| PREDICTED: hypothetical protein LOC100167859 [Acyrthosiphon pisum]
Length = 460
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRP+IDEAKRLRA+HMKEHPDYKYRPRRKPK
Sbjct: 116 EKRPYIDEAKRLRALHMKEHPDYKYRPRRKPKI 148
>gi|410929820|ref|XP_003978297.1| PREDICTED: transcription factor SOX-2-like [Takifugu rubripes]
Length = 282
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 85 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 117
>gi|403270448|ref|XP_003927192.1| PREDICTED: transcription factor SOX-2 [Saimiri boliviensis
boliviensis]
Length = 310
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 79 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 111
>gi|322786663|gb|EFZ13047.1| hypothetical protein SINV_02859 [Solenopsis invicta]
Length = 136
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFID+AKRLRA HMKEHPDYKYRPRRKPKT
Sbjct: 91 EKRPFIDQAKRLRAQHMKEHPDYKYRPRRKPKT 123
>gi|25153158|ref|NP_741837.1| Protein SOX-2, isoform b [Caenorhabditis elegans]
gi|373218691|emb|CCD62390.1| Protein SOX-2, isoform b [Caenorhabditis elegans]
Length = 199
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 37/51 (72%), Gaps = 8/51 (15%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAP 52
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK K+ + GAP P
Sbjct: 21 EKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKSINK--------KNGAPIP 63
>gi|321479263|gb|EFX90219.1| hypothetical protein DAPPUDRAFT_39618 [Daphnia pulex]
Length = 86
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/34 (91%), Positives = 34/34 (100%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 53 LEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 86
>gi|307196019|gb|EFN77744.1| Transcription factor SOX-21 [Harpegnathos saltator]
Length = 333
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 56 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 88
>gi|345325522|ref|XP_001506984.2| PREDICTED: transcription factor SOX-2-like [Ornithorhynchus
anatinus]
Length = 374
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 143 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 175
>gi|18859405|ref|NP_571361.1| transcription factor Sox-21-A [Danio rerio]
gi|6448790|gb|AAF08682.1|AF101266_1 DNA binding protein [Danio rerio]
Length = 239
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKPKN 85
>gi|27801587|emb|CAD60660.1| SRY-box containing gene 21a [Danio rerio]
Length = 239
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKPKN 85
>gi|340721031|ref|XP_003398930.1| PREDICTED: hypothetical protein LOC100647190 [Bombus terrestris]
Length = 379
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFID+AKRLRA HMKEHPDYKYRPRRKPKT
Sbjct: 95 EKRPFIDQAKRLRAQHMKEHPDYKYRPRRKPKT 127
>gi|405958762|gb|EKC24855.1| Transcription factor SOX-2 [Crassostrea gigas]
Length = 327
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 122 EKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKT 154
>gi|82188001|sp|Q7SZS1.1|SX21A_DANRE RecName: Full=Transcription factor Sox-21-A; AltName:
Full=SRY-box containing gene 21a
gi|33604114|gb|AAH56274.1| SRY-box containing gene 21a [Danio rerio]
gi|41351109|gb|AAH65639.1| SRY-box containing gene 21a [Danio rerio]
Length = 239
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKPKN 85
>gi|94957954|gb|ABF47212.1| Sox2 transcription factor, partial [Notophthalmus viridescens]
Length = 119
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 27 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 59
>gi|4099267|gb|AAD00563.1| transcriptional regulator Sox-21 [Danio rerio]
Length = 239
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKPKN 85
>gi|94471571|gb|ABF21053.1| SoxB1 [Glomeris marginata]
Length = 294
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 42 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKT 74
>gi|219986881|gb|ACL68656.1| SOX2 transcription factor [Pleurodeles waltl]
Length = 98
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 6 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 38
>gi|443724322|gb|ELU12387.1| hypothetical protein CAPTEDRAFT_20216 [Capitella teleta]
Length = 364
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 160 EKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKT 192
>gi|350416778|ref|XP_003491098.1| PREDICTED: hypothetical protein LOC100745025 [Bombus impatiens]
Length = 385
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFID+AKRLRA HMKEHPDYKYRPRRKPKT
Sbjct: 97 EKRPFIDQAKRLRAQHMKEHPDYKYRPRRKPKT 129
>gi|156383753|ref|XP_001632997.1| predicted protein [Nematostella vectensis]
gi|74315425|gb|ABA02363.1| sox family protein B1 [Nematostella vectensis]
gi|156220061|gb|EDO40934.1| predicted protein [Nematostella vectensis]
Length = 343
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRP+IDEA+RLRA+HMKEHPDYKYRPRRK KT
Sbjct: 78 EKRPYIDEARRLRAVHMKEHPDYKYRPRRKSKT 110
>gi|449266632|gb|EMC77672.1| Transcription factor SOX-3 [Columba livia]
Length = 326
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 93 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 124
>gi|341877248|gb|EGT33183.1| CBN-SOX-2 protein [Caenorhabditis brenneri]
Length = 284
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 43/66 (65%), Gaps = 9/66 (13%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAP-TSASNAFP 60
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK K+ + GAP P + P
Sbjct: 105 EKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKSINKK--------NGAPIPFGNLDTKTP 156
Query: 61 SFPLPP 66
++P P
Sbjct: 157 TYPTIP 162
>gi|313243315|emb|CBY39944.1| unnamed protein product [Oikopleura dioica]
Length = 285
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK-PKTPGQSIPNNKSPNQGAPAPTS 54
EK+P+IDEAKRLRA HMK+HPDYKYRPRRK P+ PGQ P+ + P Q P P
Sbjct: 28 EKKPYIDEAKRLRAQHMKDHPDYKYRPRRKTPQKPGQGKPDFR-PGQHLPGPAG 80
>gi|383864558|ref|XP_003707745.1| PREDICTED: uncharacterized protein LOC100878719 [Megachile
rotundata]
Length = 385
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFID+AKRLRA HMKEHPDYKYRPRRKPKT
Sbjct: 97 EKRPFIDQAKRLRAQHMKEHPDYKYRPRRKPKT 129
>gi|332018669|gb|EGI59241.1| Transcription factor Sox-14 [Acromyrmex echinatior]
Length = 337
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 56 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 88
>gi|25153156|ref|NP_741836.1| Protein SOX-2, isoform a [Caenorhabditis elegans]
gi|373218690|emb|CCD62389.1| Protein SOX-2, isoform a [Caenorhabditis elegans]
Length = 283
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 42/63 (66%), Gaps = 9/63 (14%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAP-TSASNAFP 60
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK K+ + GAP P + P
Sbjct: 105 EKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKSINKK--------NGAPIPFGNLDTKTP 156
Query: 61 SFP 63
S+P
Sbjct: 157 SYP 159
>gi|391347171|ref|XP_003747838.1| PREDICTED: transcription factor SOX-17-like [Metaseiulus
occidentalis]
Length = 238
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 38/50 (76%), Gaps = 6/50 (12%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPA 51
EKRPFIDEAKRLR++HM +HPDYKYRPRR+PK PN S N G PA
Sbjct: 59 EKRPFIDEAKRLRSIHMVQHPDYKYRPRRRPK------PNQTSANGGQPA 102
>gi|91083763|ref|XP_971910.1| PREDICTED: similar to Sox21a CG7345-PA [Tribolium castaneum]
gi|270008131|gb|EFA04579.1| Sox21a [Tribolium castaneum]
Length = 242
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 45/81 (55%), Gaps = 26/81 (32%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK--------------------TPGQSIPN 41
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK GQSIP
Sbjct: 59 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKPLLKKEPKFGFSISPLISPPMDGQSIPR 118
Query: 42 NKSPNQGAPAPTSASNAFPSF 62
+ P P S + + PS
Sbjct: 119 SMVP------PISVATSLPSL 133
>gi|229001906|emb|CAY12631.1| SRY-related HMG box B protein [Platynereis dumerilii]
Length = 292
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 45/74 (60%), Gaps = 15/74 (20%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQ----SIPNNKSPNQGAPAPTSASN 57
EKRPFIDEAKRLRA+HMK+HPDYKYRPRRKPK+ + S P P G P
Sbjct: 100 EKRPFIDEAKRLRALHMKDHPDYKYRPRRKPKSLLKKDKFSFPYPMIPGMGGP------- 152
Query: 58 AFPSFPLPPYFANH 71
+ LPP F H
Sbjct: 153 ----YGLPPGFPTH 162
>gi|170584508|ref|XP_001897041.1| HMG box family protein [Brugia malayi]
gi|158595576|gb|EDP34119.1| HMG box family protein [Brugia malayi]
Length = 368
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK K
Sbjct: 128 EKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTK 159
>gi|321479262|gb|EFX90218.1| hypothetical protein DAPPUDRAFT_37091 [Daphnia pulex]
Length = 93
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/33 (96%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA HMKEHPDYKYRPRRKPKT
Sbjct: 55 EKRPFIDEAKRLRAQHMKEHPDYKYRPRRKPKT 87
>gi|28386001|gb|AAH44735.1| Sox14 protein, partial [Mus musculus]
Length = 188
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 41/59 (69%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFP 60
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK + ++ G T A++A P
Sbjct: 55 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDSSSAIQKMGEVPHTLATSALP 113
>gi|258678263|gb|ACV87738.1| SoxB1 [Convolutriloba longifissura]
Length = 461
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 69/138 (50%), Gaps = 37/138 (26%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT------------PGQSI-PNNKSPNQG 48
EKRPFIDEAKRLRA+H+KEHPDYKYRPRRK KT PG I PN P Q
Sbjct: 141 EKRPFIDEAKRLRAVHLKEHPDYKYRPRRKTKTLMKRDKFGHVGLPGSIIGPNGAPPVQR 200
Query: 49 APA----PTSASNAFPS------FPLPPYFANHGG-GSHPHPLDSLSAAYPP-----MNM 92
A P + N + S + +P + A H G HP A PP +
Sbjct: 201 TVAQGIDPYAHMNGYMSNAAAAHYMMPDHLAMHAAYGQHP--------ALPPSPTNALGN 252
Query: 93 PHYFGSPFDAMNFSKLVQ 110
P++F + +D M S +Q
Sbjct: 253 PNHFQTRYDQMAASLYLQ 270
>gi|340025228|gb|AEK27011.1| SRY-box containing protein 2 [Hyriopsis schlegelii]
Length = 251
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMK+HPDYKYRPRRK KT
Sbjct: 44 EKRPFIDEAKRLRAIHMKDHPDYKYRPRRKTKT 76
>gi|405952909|gb|EKC20663.1| Transcription factor SOX-14 [Crassostrea gigas]
Length = 265
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 80 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 112
>gi|158287882|ref|XP_001230649.2| AGAP010922-PA [Anopheles gambiae str. PEST]
gi|157019402|gb|EAU77473.2| AGAP010922-PA [Anopheles gambiae str. PEST]
Length = 109
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/32 (100%), Positives = 32/32 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK
Sbjct: 55 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 86
>gi|344282325|ref|XP_003412924.1| PREDICTED: transcription factor SOX-2-like [Loxodonta africana]
Length = 318
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMK+HPDYKYRPRRK KT
Sbjct: 87 EKRPFIDEAKRLRALHMKKHPDYKYRPRRKTKT 119
>gi|45360120|gb|AAS59169.1| SOX21 protein [Heliocidaris erythrogramma]
gi|45360122|gb|AAS59170.1| SOX21 protein [Heliocidaris tuberculata]
Length = 267
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 58 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 90
>gi|312075372|ref|XP_003140388.1| hypothetical protein LOAG_04803 [Loa loa]
gi|307764449|gb|EFO23683.1| hypothetical protein LOAG_04803 [Loa loa]
Length = 366
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK K
Sbjct: 127 EKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTK 158
>gi|83415189|ref|NP_001032751.1| transcription factor Sox-1b [Danio rerio]
gi|108885293|sp|Q2Z1R2.1|SOX1B_DANRE RecName: Full=Transcription factor Sox-1b
gi|82568654|dbj|BAE48582.1| transcription factor SOX1B [Danio rerio]
gi|159155893|gb|AAI54496.1| SRY-box containing gene 1b [Danio rerio]
Length = 340
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 82 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 110
>gi|357609695|gb|EHJ66582.1| sex-determining region y protein, sry [Danaus plexippus]
Length = 368
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 135 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKT 167
>gi|226984|prf||1612347C Sra2 gene
Length = 98
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 57 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 89
>gi|47550931|ref|NP_999639.1| transcription factor SoxB1 [Strongylocentrotus purpuratus]
gi|11387385|gb|AAD40688.3|AF157389_1 transcription factor SoxB1 [Strongylocentrotus purpuratus]
Length = 344
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQ----SIPNNKSPNQGAPAPTSASN 57
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT + ++P +P GAP +
Sbjct: 106 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKFTLPGIINPQTGAPVQRGVGD 165
Query: 58 AFPSF 62
+
Sbjct: 166 GMHGY 170
>gi|47550929|ref|NP_999638.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|21887050|gb|AAD40687.2|AF157388_1 transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154438|gb|ABI53375.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 268
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154526|gb|ABI53419.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
Length = 268
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 58 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 90
>gi|47204980|emb|CAG03504.1| unnamed protein product [Tetraodon nigroviridis]
Length = 278
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---TPGQSIPNNKSPN 46
+EKRPFIDEAK LRAMHMKEHPDYKYRPRR + GQ +P ++P
Sbjct: 32 VEKRPFIDEAKGLRAMHMKEHPDYKYRPRRIDQDAAEKGQVLPGGRAPG 80
>gi|114154472|gb|ABI53392.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 268
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154478|gb|ABI53395.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154422|gb|ABI53367.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154416|gb|ABI53364.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154516|gb|ABI53414.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
Length = 268
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 58 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 90
>gi|170053599|ref|XP_001862749.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874058|gb|EDS37441.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 92
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/32 (100%), Positives = 32/32 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK
Sbjct: 15 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 46
>gi|114154510|gb|ABI53411.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154466|gb|ABI53389.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 267
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154482|gb|ABI53397.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154488|gb|ABI53400.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 268
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154498|gb|ABI53405.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154424|gb|ABI53368.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154504|gb|ABI53408.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154462|gb|ABI53387.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154480|gb|ABI53396.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154484|gb|ABI53398.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154486|gb|ABI53399.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154490|gb|ABI53401.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154492|gb|ABI53402.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154494|gb|ABI53403.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154496|gb|ABI53404.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154500|gb|ABI53406.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154502|gb|ABI53407.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154506|gb|ABI53409.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154508|gb|ABI53410.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
gi|114154512|gb|ABI53412.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|345100583|pdb|2LE4|A Chain A, Solution Structure Of The Hmg Box Dna-Binding Domain Of
Human Stem Cell Transcription Factor Sox2
Length = 81
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 49 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 81
>gi|114154450|gb|ABI53381.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 268
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154400|gb|ABI53356.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|426219448|ref|XP_004023528.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-14 [Ovis
aries]
Length = 404
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 217 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 248
>gi|114154440|gb|ABI53376.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154442|gb|ABI53377.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154446|gb|ABI53379.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154448|gb|ABI53380.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154452|gb|ABI53382.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154454|gb|ABI53383.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154456|gb|ABI53384.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154458|gb|ABI53385.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154460|gb|ABI53386.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154470|gb|ABI53391.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
gi|114154536|gb|ABI53424.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 268
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154518|gb|ABI53415.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
gi|114154520|gb|ABI53416.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
gi|114154524|gb|ABI53418.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
gi|114154530|gb|ABI53421.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
gi|114154532|gb|ABI53422.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
gi|114154534|gb|ABI53423.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
Length = 268
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 58 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 90
>gi|114154402|gb|ABI53357.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154404|gb|ABI53358.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154406|gb|ABI53359.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154408|gb|ABI53360.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154412|gb|ABI53362.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154418|gb|ABI53365.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154420|gb|ABI53366.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154426|gb|ABI53369.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154428|gb|ABI53370.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154430|gb|ABI53371.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
gi|114154434|gb|ABI53373.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154444|gb|ABI53378.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 268
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154432|gb|ABI53372.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|390480291|ref|XP_002763391.2| PREDICTED: transcription factor SOX-3-like, partial [Callithrix
jacchus]
Length = 342
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 37/43 (86%), Gaps = 4/43 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS 44
EKRPFIDEAKRLRA+HMKE+PDYKYRPRRK KT +P N++
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKT----LPKNRA 222
>gi|114154528|gb|ABI53420.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
Length = 268
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 58 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 90
>gi|114154436|gb|ABI53374.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154410|gb|ABI53361.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|224059846|ref|XP_002196106.1| PREDICTED: transcription factor SOX-14 [Taeniopygia guttata]
Length = 240
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|114154522|gb|ABI53417.1| transcription factor SoxB2 [Strongylocentrotus franciscanus]
Length = 268
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 58 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 90
>gi|126325843|ref|XP_001365271.1| PREDICTED: transcription factor SOX-14-like [Monodelphis
domestica]
Length = 240
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|259013592|ref|NP_001158344.1| SRY-box containing gene 14 [Oryzias latipes]
gi|227336650|gb|ACP21272.1| SRY-box containing gene 14 [Oryzias latipes]
Length = 238
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|114154474|gb|ABI53393.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 268
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|114154414|gb|ABI53363.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|45382127|ref|NP_990092.1| transcription factor SOX-14 [Gallus gallus]
gi|24638225|sp|Q9W7R6.1|SOX14_CHICK RecName: Full=Transcription factor SOX-14; AltName:
Full=SRY-related protein CH60
gi|7408165|gb|AAF61300.2|AF193760_1 HMG box transcription factor SOX14 [Gallus gallus]
gi|4757357|dbj|BAA77265.1| SOX14 [Gallus gallus]
Length = 240
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|6625692|gb|AAF19353.1|AF182357_1 SOX14 protein, partial [Mus musculus]
Length = 215
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 39 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 70
>gi|114154464|gb|ABI53388.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 267
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|154147670|ref|NP_001093703.1| transcription factor Sox-14 [Xenopus (Silurana) tropicalis]
gi|239977605|sp|A4QNG3.1|SOX14_XENTR RecName: Full=Transcription factor Sox-14; AltName: Full=SRY (sex
determining region Y)-box 14
gi|138519700|gb|AAI35638.1| sox14 protein [Xenopus (Silurana) tropicalis]
gi|162417289|emb|CAP58280.1| Sox14 protein [Xenopus (Silurana) tropicalis]
Length = 239
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|348513448|ref|XP_003444254.1| PREDICTED: transcription factor Sox-14-like [Oreochromis
niloticus]
gi|126723920|gb|ABO26873.1| Sox14 [Oreochromis niloticus]
Length = 238
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|114154398|gb|ABI53355.1| transcription factor SoxB2 [Strongylocentrotus purpuratus]
Length = 270
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|410924812|ref|XP_003975875.1| PREDICTED: transcription factor Sox-14-like [Takifugu rubripes]
Length = 237
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|297672054|ref|XP_002814130.1| PREDICTED: transcription factor SOX-14 [Pongo abelii]
Length = 240
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|321479261|gb|EFX90217.1| hypothetical protein DAPPUDRAFT_18307 [Daphnia pulex]
Length = 84
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/32 (96%), Positives = 32/32 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK
Sbjct: 50 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPK 81
>gi|4759162|ref|NP_004180.1| transcription factor SOX-14 [Homo sapiens]
gi|255003711|ref|NP_001157253.1| transcription factor SOX-14 [Bos taurus]
gi|302564710|ref|NP_001181586.1| transcription factor SOX-14 [Macaca mulatta]
gi|114589393|ref|XP_526317.2| PREDICTED: transcription factor SOX-14 [Pan troglodytes]
gi|291399837|ref|XP_002716514.1| PREDICTED: SRY-box 14 [Oryctolagus cuniculus]
gi|301775910|ref|XP_002923375.1| PREDICTED: transcription factor SOX-14-like [Ailuropoda
melanoleuca]
gi|332232256|ref|XP_003265321.1| PREDICTED: transcription factor SOX-14 [Nomascus leucogenys]
gi|338715125|ref|XP_003363214.1| PREDICTED: transcription factor SOX-14-like [Equus caballus]
gi|345789238|ref|XP_003433195.1| PREDICTED: transcription factor SOX-14 [Canis lupus familiaris]
gi|397503859|ref|XP_003822534.1| PREDICTED: transcription factor SOX-14 [Pan paniscus]
gi|402861464|ref|XP_003895110.1| PREDICTED: transcription factor SOX-14 [Papio anubis]
gi|410971319|ref|XP_003992117.1| PREDICTED: transcription factor SOX-14 [Felis catus]
gi|426342247|ref|XP_004037763.1| PREDICTED: transcription factor SOX-14 [Gorilla gorilla gorilla]
gi|6831689|sp|O95416.1|SOX14_HUMAN RecName: Full=Transcription factor SOX-14; AltName: Full=Protein
SOX-28
gi|47117085|sp|P61259.1|SOX14_MACFA RecName: Full=Transcription factor SOX-14
gi|8547213|gb|AAF76294.1|AF193436_1 HMG box transcription factor [Homo sapiens]
gi|4008101|gb|AAC95380.1| DNA-binding protein SOX14 [Homo sapiens]
gi|4877278|emb|CAB43111.1| Sox-14 protein [Homo sapiens]
gi|14388571|dbj|BAB60804.1| hypothetical protein [Macaca fascicularis]
gi|76825072|gb|AAI06731.1| SRY (sex determining region Y)-box 14 [Homo sapiens]
gi|76827595|gb|AAI06730.1| SRY (sex determining region Y)-box 14 [Homo sapiens]
gi|119599503|gb|EAW79097.1| SRY (sex determining region Y)-box 14 [Homo sapiens]
gi|189054297|dbj|BAG36817.1| unnamed protein product [Homo sapiens]
gi|208968777|dbj|BAG74227.1| SRY (sex determining region Y)-box 14 [synthetic construct]
gi|212551862|gb|ACJ31785.1| SOX14 [Capra hircus]
gi|212551864|gb|ACJ31786.1| SOX14 [Bos taurus]
gi|281343682|gb|EFB19266.1| hypothetical protein PANDA_012510 [Ailuropoda melanoleuca]
gi|296490984|tpg|DAA33082.1| TPA: SRY (sex determining region Y)-box 14 [Bos taurus]
gi|355560011|gb|EHH16739.1| hypothetical protein EGK_12075 [Macaca mulatta]
gi|355747032|gb|EHH51646.1| hypothetical protein EGM_11067 [Macaca fascicularis]
gi|432108437|gb|ELK33187.1| Transcription factor SOX-14 [Myotis davidii]
gi|440910849|gb|ELR60600.1| Transcription factor SOX-14 [Bos grunniens mutus]
gi|444518703|gb|ELV12331.1| Transcription factor SOX-14 [Tupaia chinensis]
Length = 240
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|348582047|ref|XP_003476788.1| PREDICTED: transcription factor SOX-14-like [Cavia porcellus]
Length = 240
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|157818911|ref|NP_001100320.1| SRY (sex determining region Y)-box 14 [Rattus norvegicus]
gi|226437584|ref|NP_035570.1| transcription factor SOX-14 [Mus musculus]
gi|395832855|ref|XP_003789468.1| PREDICTED: transcription factor SOX-14 [Otolemur garnettii]
gi|19862533|sp|Q04892.2|SOX14_MOUSE RecName: Full=Transcription factor SOX-14
gi|7416987|gb|AAF62397.1|AF193437_1 HMG box transcription factor [Mus musculus]
gi|74209694|dbj|BAE23582.1| unnamed protein product [Mus musculus]
gi|148689076|gb|EDL21023.1| mCG1032756 [Mus musculus]
gi|149018788|gb|EDL77429.1| SRY-box containing gene 14 (predicted) [Rattus norvegicus]
gi|212551866|gb|ACJ31787.1| SOX14 [Rattus norvegicus]
gi|431916954|gb|ELK16710.1| Transcription factor SOX-14 [Pteropus alecto]
Length = 240
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|403278876|ref|XP_003931008.1| PREDICTED: transcription factor SOX-14 [Saimiri boliviensis
boliviensis]
Length = 240
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|7416985|gb|AAF62396.1|AF193435_1 HMG box transcription factor [Mus musculus]
Length = 235
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 48 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 79
>gi|288557319|ref|NP_001165685.1| transcription factor Sox-14 [Xenopus laevis]
gi|239977604|sp|B0ZTE2.1|SOX14_XENLA RecName: Full=Transcription factor Sox-14; AltName: Full=SRY (sex
determining region Y)-box 14
gi|166836042|gb|ABY90181.1| SRY-box containing gene 14 [Xenopus laevis]
Length = 239
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|50540036|ref|NP_001002483.1| transcription factor Sox-1a [Danio rerio]
gi|49904596|gb|AAH76326.1| SRY-box containing gene 1a [Danio rerio]
gi|182888730|gb|AAI64138.1| Sox1a protein [Danio rerio]
Length = 336
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 82 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 110
>gi|83415106|ref|NP_001032769.1| transcription factor Sox-14 [Danio rerio]
gi|123916379|sp|Q32PP9.1|SOX14_DANRE RecName: Full=Transcription factor Sox-14
gi|79158632|gb|AAI08034.1| SRY-box containing gene 14 [Danio rerio]
Length = 238
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|33415924|gb|AAQ18499.1| transcription factor Sox14b [Takifugu rubripes]
Length = 237
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|344296664|ref|XP_003420025.1| PREDICTED: transcription factor SOX-14-like [Loxodonta africana]
Length = 240
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|126723922|gb|ABO26874.1| Sox14 [Oreochromis aureus]
Length = 238
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|395519263|ref|XP_003763770.1| PREDICTED: transcription factor SOX-14 [Sarcophilus harrisii]
Length = 355
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 168 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 199
>gi|28373291|pdb|1GT0|D Chain D, Crystal Structure Of A PouHMGDNA TERNARY COMPLEX
Length = 80
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 48 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 80
>gi|42543139|pdb|1O4X|B Chain B, Ternary Complex Of The Dna Binding Domains Of The Oct1
And Sox2 Transcription Factors With A 19mer
Oligonucleotide From The Hoxb1 Regulatory Element
Length = 88
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 53 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 85
>gi|410920730|ref|XP_003973836.1| PREDICTED: transcription factor Sox-14-like [Takifugu rubripes]
gi|33415922|gb|AAQ18498.1| transcription factor Sox14a [Takifugu rubripes]
gi|47211149|emb|CAF95441.1| unnamed protein product [Tetraodon nigroviridis]
Length = 238
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|307196017|gb|EFN77742.1| Transcription factor SOX-14 [Harpegnathos saltator]
Length = 353
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFID+AKRLRA HMKEHPDYKYRPRRKPKT
Sbjct: 66 QKRPFIDQAKRLRAQHMKEHPDYKYRPRRKPKT 98
>gi|148616187|gb|ABQ96860.1| Sox3 [Acanthopagrus schlegelii]
Length = 298
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 78 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 106
>gi|33416987|gb|AAH55767.1| Sox14 protein, partial [Mus musculus]
Length = 398
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 211 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 242
>gi|71680054|gb|AAI00556.1| Sox14 protein, partial [Mus musculus]
Length = 402
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 215 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 246
>gi|53734446|gb|AAH83360.1| Sox14 protein, partial [Mus musculus]
Length = 401
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 214 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 245
>gi|401712676|gb|AFP99071.1| SoxB1 [Ophiocoma wendtii]
Length = 336
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 103 QKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKT 135
>gi|351703932|gb|EHB06851.1| Transcription factor SOX-14 [Heterocephalus glaber]
Length = 240
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|308512313|ref|XP_003118339.1| CRE-SOX-2 protein [Caenorhabditis remanei]
gi|308238985|gb|EFO82937.1| CRE-SOX-2 protein [Caenorhabditis remanei]
Length = 282
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%), Gaps = 12/66 (18%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAP----TSASN 57
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRK K+ + GAP P + +
Sbjct: 105 DKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKSINKK--------NGAPIPFGNIDTKAP 156
Query: 58 AFPSFP 63
A+P+ P
Sbjct: 157 AYPAIP 162
>gi|193082997|ref|NP_001122330.1| HMG transcription factor SoxB1 [Ciona intestinalis]
gi|70571230|dbj|BAE06704.1| transcription factor protein [Ciona intestinalis]
Length = 414
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/32 (90%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRK K
Sbjct: 141 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKTK 172
>gi|121544128|gb|ABM55677.1| Sox3 [Carassius auratus]
Length = 297
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 78 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 106
>gi|410929129|ref|XP_003977952.1| PREDICTED: transcription factor Sox-1b-like [Takifugu rubripes]
gi|33415914|gb|AAQ18494.1| transcription factor Sox1b [Takifugu rubripes]
Length = 333
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 82 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 110
>gi|77696445|gb|ABB00901.1| SRY-related HMG-box 3 [Epinephelus coioides]
Length = 300
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 80 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 108
>gi|85060504|ref|NP_001001811.2| transcription factor Sox-3 [Danio rerio]
gi|82183737|sp|Q6EJB7.1|SOX3_DANRE RecName: Full=Transcription factor Sox-3
gi|32331001|gb|AAP79985.1| Sox3 [Danio rerio]
gi|62202228|gb|AAH92845.1| SRY-box containing gene 3 [Danio rerio]
gi|82568658|dbj|BAE48584.1| transcription factor SOX3 [Danio rerio]
gi|160773677|gb|AAI55139.1| SRY-box containing gene 3 [Danio rerio]
Length = 300
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 80 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 108
>gi|157278266|ref|NP_001098234.1| SOX3 protein [Oryzias latipes]
gi|6688924|emb|CAB65318.1| SOX3 protein [Oryzias latipes]
Length = 300
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 80 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 108
>gi|84871724|dbj|BAD11369.2| Sox3 [Danio rerio]
Length = 300
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 80 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 108
>gi|343796198|gb|AEM63538.1| SRY-related homeo box protein 3 [Clarias gariepinus]
Length = 222
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 42 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 70
>gi|126723924|gb|ABO26875.1| Sox14 [Oreochromis karongae]
gi|126723926|gb|ABO26876.1| Sox14 [Oreochromis mossambicus]
Length = 230
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>gi|325980260|gb|ADZ48389.1| Sox3 [Polyodon spathula]
Length = 249
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 39 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 67
>gi|259013580|ref|NP_001158337.1| SRY-box containing gene 1a [Oryzias latipes]
gi|227336630|gb|ACP21262.1| SRY-box containing gene 1a [Oryzias latipes]
Length = 322
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 82 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 110
>gi|21435810|gb|AAM51629.1| SOX14 [Ornithorhynchus anatinus]
Length = 226
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 48 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 79
>gi|109940024|sp|Q6DGL6.2|SOX1A_DANRE RecName: Full=Transcription factor Sox-1a
gi|66911175|gb|AAH96992.1| SRY-box containing gene 1a [Danio rerio]
gi|82568652|dbj|BAE48581.1| transcription factor SOX1A [Danio rerio]
Length = 336
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 82 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 110
>gi|348530902|ref|XP_003452949.1| PREDICTED: transcription factor Sox-1a-like [Oreochromis niloticus]
Length = 344
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 82 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 110
>gi|348506758|ref|XP_003440924.1| PREDICTED: transcription factor Sox-1a-like [Oreochromis niloticus]
Length = 354
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 88 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 116
>gi|40642793|emb|CAD58840.1| SoxB1 protein [Ciona intestinalis]
Length = 353
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/32 (90%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRK K
Sbjct: 80 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKTK 111
>gi|348501035|ref|XP_003438076.1| PREDICTED: transcription factor Sox-14-like [Oreochromis
niloticus]
Length = 241
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK+
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKS 85
>gi|27544772|dbj|BAC55017.1| Sox family of transcription factor [Halocynthia roretzi]
Length = 360
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/32 (90%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRK K
Sbjct: 93 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKTK 124
>gi|115344218|gb|ABI95135.1| Sox3 [Lates calcarifer]
Length = 300
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 80 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 108
>gi|47124871|gb|AAH69948.1| Sox14 protein, partial [Mus musculus]
Length = 365
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 178 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 209
>gi|321461568|gb|EFX72599.1| hypothetical protein DAPPUDRAFT_37759 [Daphnia pulex]
Length = 80
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 48 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKT 80
>gi|47225311|emb|CAG09811.1| unnamed protein product [Tetraodon nigroviridis]
Length = 295
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 75 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 103
>gi|110760895|ref|XP_001121937.1| PREDICTED: hypothetical protein LOC726180 [Apis mellifera]
Length = 393
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFID+AKRLRA HMKE+PDYKYRPRRKPKT
Sbjct: 101 EKRPFIDQAKRLRAQHMKEYPDYKYRPRRKPKT 133
>gi|380016498|ref|XP_003692220.1| PREDICTED: uncharacterized protein LOC100869820 [Apis florea]
Length = 391
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFID+AKRLRA HMKE+PDYKYRPRRKPKT
Sbjct: 101 EKRPFIDQAKRLRAQHMKEYPDYKYRPRRKPKT 133
>gi|402591606|gb|EJW85535.1| hypothetical protein WUBG_03553, partial [Wuchereria bancrofti]
Length = 170
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 34/41 (82%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNN 42
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK K + +N
Sbjct: 130 EKRPFIDEAKRLRAIHMKEHPDYKYRPRRKRKITKKEWSSN 170
>gi|45360126|gb|AAS59172.1| SOX1 protein [Heliocidaris tuberculata]
Length = 345
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 59/122 (48%), Gaps = 29/122 (23%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQ----SIPNNKSPNQGAPAPTSAS- 56
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT + ++P +P GAP
Sbjct: 108 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKFTLPGIINPQTGAPVQRGVGE 167
Query: 57 ------------NAFPSFPLP--PYFANHGGGSHP----------HPLDSLSAAYPPMNM 92
N +PS + +H G+H H D YPPM+
Sbjct: 168 GMHGYQHLNGYMNGYPSMMQDQLSHLPSHSYGAHQAAQMANSGLHHRYDMTQLGYPPMST 227
Query: 93 PH 94
H
Sbjct: 228 TH 229
>gi|410932201|ref|XP_003979482.1| PREDICTED: transcription factor Sox-3-like [Takifugu rubripes]
Length = 299
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 79 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 107
>gi|348515483|ref|XP_003445269.1| PREDICTED: transcription factor Sox-3-like [Oreochromis niloticus]
Length = 300
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 80 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 108
>gi|45360124|gb|AAS59171.1| SOX1 protein [Heliocidaris erythrogramma]
Length = 345
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQ----SIPNNKSPNQGAPAPTSASN 57
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT + ++P +P GAP
Sbjct: 108 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKFTLPGIINPQTGAPVQRGVGE 167
Query: 58 AFPSF 62
+
Sbjct: 168 GMHGY 172
>gi|402580207|gb|EJW74157.1| HMG box family protein, partial [Wuchereria bancrofti]
Length = 167
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/30 (96%), Positives = 30/30 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK
Sbjct: 126 EKRPFIDEAKRLRALHMKEHPDYKYRPRRK 155
>gi|312373336|gb|EFR21096.1| hypothetical protein AND_17577 [Anopheles darlingi]
Length = 1201
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 472 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 500
>gi|194032512|gb|ACF33138.1| SoxB1 [Acropora millepora]
Length = 336
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRP++DEAKRLRA+HMK+HPDYKYRPRRK KT
Sbjct: 75 EKRPYVDEAKRLRAVHMKDHPDYKYRPRRKSKT 107
>gi|269101192|gb|ACZ25557.1| SRY-box containing protein B2b2 [Macrobrachium nipponense]
Length = 121
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA HMK+HPDYKYRPRRKPKT
Sbjct: 55 EKRPFIDEAKRLRAQHMKDHPDYKYRPRRKPKT 87
>gi|74143534|dbj|BAE28833.1| unnamed protein product [Mus musculus]
Length = 230
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/31 (93%), Positives = 30/31 (96%)
Query: 4 RPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
RPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 1 RPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 31
>gi|33415918|gb|AAQ18496.1| transcription factor Sox3 [Takifugu rubripes]
Length = 300
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 80 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 108
>gi|170042953|ref|XP_001849171.1| transcription factor SOX-19 [Culex quinquefasciatus]
gi|167866359|gb|EDS29742.1| transcription factor SOX-19 [Culex quinquefasciatus]
Length = 449
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 190 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 218
>gi|157104969|ref|XP_001648654.1| sex-determining region y protein, sry [Aedes aegypti]
gi|108884146|gb|EAT48371.1| AAEL000584-PA [Aedes aegypti]
Length = 464
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 192 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 220
>gi|195437178|ref|XP_002066518.1| GK24531 [Drosophila willistoni]
gi|194162603|gb|EDW77504.1| GK24531 [Drosophila willistoni]
Length = 727
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 231 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 259
>gi|442626922|ref|NP_001260269.1| SoxNeuro, isoform B [Drosophila melanogaster]
gi|440213581|gb|AGB92805.1| SoxNeuro, isoform B [Drosophila melanogaster]
Length = 761
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 224 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 252
>gi|195053253|ref|XP_001993541.1| GH13864 [Drosophila grimshawi]
gi|193900600|gb|EDV99466.1| GH13864 [Drosophila grimshawi]
Length = 602
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 42/64 (65%), Gaps = 15/64 (23%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK--------------TPG-QSIPNNKSPN 46
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK K PG QS+P +P
Sbjct: 241 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPMGGMMPGQQSLPEPGTPT 300
Query: 47 QGAP 50
+G P
Sbjct: 301 RGMP 304
>gi|194858711|ref|XP_001969238.1| GG25303 [Drosophila erecta]
gi|190661105|gb|EDV58297.1| GG25303 [Drosophila erecta]
Length = 534
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 226 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 254
>gi|358332978|dbj|GAA51560.1| transcription factor SOX1/2/3/14/21 [Clonorchis sinensis]
Length = 288
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 31/33 (93%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
MEKRPFIDEAKRLRA HM+ +PDYKYRPRRKPK
Sbjct: 172 MEKRPFIDEAKRLRASHMRAYPDYKYRPRRKPK 204
>gi|335371123|gb|AEH57090.1| SoxB2 [Bugula neritina]
Length = 199
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFP 60
+EKRPFIDEAKRLRA HM +HP+YKYRPRRKPK+ ++ S N PTS + FP
Sbjct: 55 LEKRPFIDEAKRLRAQHMSDHPEYKYRPRRKPKSLLKAKDTKYSSNYPMMLPTSFT--FP 112
Query: 61 SFPLPP 66
+ PP
Sbjct: 113 TSISPP 118
>gi|507056|emb|CAA56221.1| Zf Sox 19 [Danio rerio]
Length = 319
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 56/106 (52%), Gaps = 19/106 (17%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPFIDEAKRLRA+HMKE+PDYKY+PRRK P K N A P SA N +
Sbjct: 98 EKRPFIDEAKRLRALHMKEYPDYKYKPRRKQ-------PVLKKDNPAAKYPLSAGNLLAA 150
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSK 107
A G G P +DS Y + Y G DA+ +S+
Sbjct: 151 -------AAQGSGGSPR-MDS----YGWGHTGGYPGMQTDALGYSQ 184
>gi|339237773|ref|XP_003380441.1| transcription factor SOX-3 [Trichinella spiralis]
gi|316976710|gb|EFV59943.1| transcription factor SOX-3 [Trichinella spiralis]
Length = 385
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 30/33 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA HMK HPDYKYRPRRK KT
Sbjct: 148 EKRPFIDEAKRLRADHMKLHPDYKYRPRRKQKT 180
>gi|17975569|ref|NP_524735.1| SoxNeuro, isoform A [Drosophila melanogaster]
gi|7297454|gb|AAF52712.1| SoxNeuro, isoform A [Drosophila melanogaster]
gi|25012315|gb|AAN71269.1| LD44245p [Drosophila melanogaster]
gi|220947344|gb|ACL86215.1| SoxN-PA [synthetic construct]
gi|220952558|gb|ACL88822.1| SoxN-PA [synthetic construct]
Length = 572
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 224 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 252
>gi|195339325|ref|XP_002036270.1| GM17140 [Drosophila sechellia]
gi|194130150|gb|EDW52193.1| GM17140 [Drosophila sechellia]
Length = 573
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 225 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 253
>gi|6634123|emb|CAB64386.1| SoxNeuro [Drosophila melanogaster]
Length = 571
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 223 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 251
>gi|195473153|ref|XP_002088860.1| GE18794 [Drosophila yakuba]
gi|194174961|gb|EDW88572.1| GE18794 [Drosophila yakuba]
Length = 579
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 227 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 255
>gi|194760785|ref|XP_001962613.1| GF15546 [Drosophila ananassae]
gi|190616310|gb|EDV31834.1| GF15546 [Drosophila ananassae]
Length = 652
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 223 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 251
>gi|108773462|gb|ABG11757.1| SRY-box containing transcription factor 21 [Oreochromis
niloticus]
Length = 75
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/30 (100%), Positives = 30/30 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK
Sbjct: 46 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 75
>gi|223551640|gb|ACM89960.1| sex determining region Y-box 2 [Notophthalmus viridescens]
Length = 234
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/31 (93%), Positives = 30/31 (96%)
Query: 4 RPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
RPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 1 RPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 31
>gi|198472005|ref|XP_001355808.2| GA14769 [Drosophila pseudoobscura pseudoobscura]
gi|198139563|gb|EAL32867.2| GA14769 [Drosophila pseudoobscura pseudoobscura]
Length = 566
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 227 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 255
>gi|195156563|ref|XP_002019169.1| GL25564 [Drosophila persimilis]
gi|194115322|gb|EDW37365.1| GL25564 [Drosophila persimilis]
Length = 565
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 226 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 254
>gi|108773426|gb|ABG11739.1| SRY-box containing transcription factor 1b [Oreochromis
niloticus]
Length = 75
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/30 (100%), Positives = 30/30 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK
Sbjct: 46 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 75
>gi|108773424|gb|ABG11738.1| SRY-box containing transcription factor 1a [Oreochromis
niloticus]
Length = 75
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/30 (100%), Positives = 30/30 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK
Sbjct: 46 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 75
>gi|114154468|gb|ABI53390.1| transcription factor SoxB2 [Strongylocentrotus droebachiensis]
Length = 268
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYK+RPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEHPDYKHRPRRKPKS 91
>gi|114154514|gb|ABI53413.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKE+PDYKYRPRRKPK+
Sbjct: 59 DKRPFIDEAKRLRALHMKEYPDYKYRPRRKPKS 91
>gi|108773430|gb|ABG11741.1| SRY-box containing transcription factor 3 [Oreochromis niloticus]
Length = 75
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/30 (100%), Positives = 30/30 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK
Sbjct: 46 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 75
>gi|195577699|ref|XP_002078706.1| GD23563 [Drosophila simulans]
gi|194190715|gb|EDX04291.1| GD23563 [Drosophila simulans]
Length = 489
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 143 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 171
>gi|126337258|ref|XP_001364938.1| PREDICTED: transcription factor SOX-1-like [Monodelphis domestica]
Length = 394
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 98 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 126
>gi|195115914|ref|XP_002002501.1| GI17415 [Drosophila mojavensis]
gi|193913076|gb|EDW11943.1| GI17415 [Drosophila mojavensis]
Length = 610
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 239 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 267
>gi|342918504|gb|AEL79480.1| Sox 19 [Dicentrarchus labrax]
Length = 309
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF 59
EKRPFIDEAKRLRA+HMKE+PDYKY+PRRK K P K Q P SA N
Sbjct: 104 EKRPFIDEAKRLRAVHMKEYPDYKYKPRRKTK------PLLKKDTQVGKYPLSAGNML 155
>gi|380013641|ref|XP_003690859.1| PREDICTED: transcription factor SOX-2-like [Apis florea]
Length = 458
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 185 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 213
>gi|195398461|ref|XP_002057840.1| GJ18351 [Drosophila virilis]
gi|194141494|gb|EDW57913.1| GJ18351 [Drosophila virilis]
Length = 575
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 240 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 268
>gi|160358327|ref|NP_001089143.1| transcription factor Sox-1 [Xenopus laevis]
gi|123907527|sp|Q2PG84.1|SOX1_XENLA RecName: Full=Transcription factor Sox-1; Short=XlSox1;
Short=xSox1; AltName: Full=SRY (sex determining region
Y)-box 1
gi|84570560|dbj|BAE72677.1| Sox1 [Xenopus laevis]
gi|154529697|gb|ABS83011.1| SRY-box containing protein [Xenopus laevis]
gi|213625020|gb|AAI69643.1| Sox1 protein [Xenopus laevis]
Length = 393
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 79 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 107
>gi|124244499|gb|ABM92338.1| sex determining region Y-box 1 [Xenopus laevis]
Length = 395
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 79 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 107
>gi|74267244|dbj|BAE44120.1| transcription factor SoxB1 [Hemicentrotus pulcherrimus]
Length = 99
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQ----SIPNNKSPNQGAPAPTSASN 57
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT + ++P +P GAP +
Sbjct: 36 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKFTLPGIINPQTGAPVQRGVGD 95
Query: 58 AF 59
Sbjct: 96 GM 97
>gi|340723771|ref|XP_003400262.1| PREDICTED: transcription factor SOX-2-like [Bombus terrestris]
Length = 453
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 183 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 211
>gi|350426491|ref|XP_003494453.1| PREDICTED: transcription factor SOX-2-like [Bombus impatiens]
Length = 455
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 184 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 212
>gi|383857369|ref|XP_003704177.1| PREDICTED: transcription factor SOX-2-like [Megachile rotundata]
Length = 467
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 187 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 215
>gi|241999950|ref|XP_002434618.1| sox14, putative [Ixodes scapularis]
gi|215497948|gb|EEC07442.1| sox14, putative [Ixodes scapularis]
Length = 355
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFI+EAKRLRA+HMKEHPDYKY+PRRKPK+
Sbjct: 93 DKRPFIEEAKRLRALHMKEHPDYKYKPRRKPKS 125
>gi|307182716|gb|EFN69840.1| Transcription factor SOX-2 [Camponotus floridanus]
Length = 461
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 191 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 219
>gi|328778318|ref|XP_003249473.1| PREDICTED: transcription factor SOX-2-like [Apis mellifera]
Length = 471
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 199 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 227
>gi|76631951|ref|XP_875555.1| PREDICTED: transcription factor SOX-1 [Bos taurus]
gi|297481343|ref|XP_002692040.1| PREDICTED: transcription factor SOX-1 [Bos taurus]
gi|296481598|tpg|DAA23713.1| TPA: SRY (sex determining region Y)-box 1-like [Bos taurus]
Length = 369
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 91 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 119
>gi|334347318|ref|XP_001368820.2| PREDICTED: transcription factor SOX-2-like [Monodelphis domestica]
Length = 348
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 95 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 123
>gi|114154476|gb|ABI53394.1| transcription factor SoxB2 [Strongylocentrotus pallidus]
Length = 267
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFID AKRLRA+HMKEHPDYKYRPRRKPK+
Sbjct: 59 DKRPFIDGAKRLRALHMKEHPDYKYRPRRKPKS 91
>gi|242019305|ref|XP_002430102.1| transcription factor Sox-2, putative [Pediculus humanus corporis]
gi|212515183|gb|EEB17364.1| transcription factor Sox-2, putative [Pediculus humanus corporis]
Length = 448
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 224 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 252
>gi|124430775|ref|NP_001074465.1| transcription factor Sox-1 [Xenopus (Silurana) tropicalis]
gi|239977606|sp|A2TED3.1|SOX1_XENTR RecName: Full=Transcription factor Sox-1; AltName: Full=SRY (Sex
determining region Y)-box 1
gi|124244501|gb|ABM92339.1| sex determining region Y-box 1 [Xenopus (Silurana) tropicalis]
gi|166797007|gb|AAI59122.1| SRY (sex determining region Y)-box 1 [Xenopus (Silurana)
tropicalis]
Length = 401
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 82 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 110
>gi|468794|emb|CAA50467.1| soxB [Homo sapiens]
Length = 76
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKE+PDYKYRPRRK KT
Sbjct: 42 EKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKT 74
>gi|440897895|gb|ELR49497.1| Transcription factor SOX-3, partial [Bos grunniens mutus]
Length = 81
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKE+PDYKYRPRRK KT
Sbjct: 46 EKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKT 78
>gi|291415797|ref|XP_002724136.1| PREDICTED: SRY (sex determining region Y)-box 3 [Oryctolagus
cuniculus]
Length = 377
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 95 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 123
>gi|211908585|gb|ACJ12602.1| sex determining region Y-box 2 [Equus caballus]
Length = 321
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 90 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 118
>gi|49204505|dbj|BAD24665.1| SOX1 [Cynops pyrrhogaster]
Length = 367
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 116
>gi|356995555|dbj|BAL14714.1| transcription factor SOX1 [Cynops pyrrhogaster]
Length = 367
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 116
>gi|296188990|ref|XP_002742590.1| PREDICTED: transcription factor SOX-1 [Callithrix jacchus]
Length = 390
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 98 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 126
>gi|73989544|ref|XP_849239.1| PREDICTED: transcription factor SOX-1 [Canis lupus familiaris]
Length = 403
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 102 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 130
>gi|2230883|emb|CAA73847.1| Sry-related Box 1 protein [Homo sapiens]
Length = 387
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 96 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 124
>gi|402902493|ref|XP_003914135.1| PREDICTED: transcription factor Sox-1b-like [Papio anubis]
Length = 295
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 97 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 125
>gi|1711464|sp|P53783.1|SOX1_MOUSE RecName: Full=Transcription factor SOX-1
gi|1213025|emb|CAA63846.1| SOX1 protein [Mus musculus]
Length = 391
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 96 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 124
>gi|344242654|gb|EGV98757.1| Transcription factor SOX-14 [Cricetulus griseus]
Length = 110
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 31/33 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKN 85
>gi|348542989|ref|XP_003458966.1| PREDICTED: transcription factor Sox-19a-like [Oreochromis
niloticus]
Length = 307
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF 59
EKRPFIDEAKRLRA+HMKE+PDYKY+PRRK K P K Q P +A N
Sbjct: 104 EKRPFIDEAKRLRAVHMKEYPDYKYKPRRKTK------PLLKKDTQVGKYPLTAGNLL 155
>gi|45383488|ref|NP_989664.1| transcription factor SOX-1 [Gallus gallus]
gi|82123073|sp|O57401.1|SOX1_CHICK RecName: Full=Transcription factor SOX-1
gi|2947025|dbj|BAA25092.1| SOX1 [Gallus gallus]
Length = 373
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 93 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 121
>gi|241845883|ref|XP_002415541.1| sox1, putative [Ixodes scapularis]
gi|215509753|gb|EEC19206.1| sox1, putative [Ixodes scapularis]
Length = 462
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 274 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 302
>gi|395855188|ref|XP_003800052.1| PREDICTED: transcription factor SOX-1 [Otolemur garnettii]
Length = 366
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 73 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 101
>gi|117606322|ref|NP_033259.2| transcription factor SOX-1 [Mus musculus]
gi|30024606|dbj|BAC75667.1| transcriptional factor SOX1 [Mus musculus]
gi|225000942|gb|AAI72600.1| SRY-box containing gene 1 [synthetic construct]
gi|225001012|gb|AAI72706.1| SRY-box containing gene 1 [synthetic construct]
Length = 391
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 96 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 124
>gi|30179900|ref|NP_005977.2| transcription factor SOX-1 [Homo sapiens]
gi|206729896|sp|O00570.2|SOX1_HUMAN RecName: Full=Transcription factor SOX-1
gi|119629563|gb|EAX09158.1| SRY (sex determining region Y)-box 1 [Homo sapiens]
Length = 391
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 96 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 124
>gi|189237171|ref|XP_974496.2| PREDICTED: similar to transcription factor SOX-19 [Tribolium
castaneum]
Length = 382
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 127 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 155
>gi|108773428|gb|ABG11740.1| SRY-box containing transcription factor 2 [Oreochromis niloticus]
Length = 75
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/30 (96%), Positives = 30/30 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK
Sbjct: 46 EKRPFIDEAKRLRALHMKEHPDYKYRPRRK 75
>gi|425854823|ref|NP_570983.2| transcription factor Sox-19a [Danio rerio]
gi|108927565|sp|P47792.2|SX19A_DANRE RecName: Full=Transcription factor Sox-19a
gi|50418474|gb|AAH78221.1| Sox19a protein [Danio rerio]
gi|82568660|dbj|BAE48585.1| transcription factor SOX19A [Danio rerio]
Length = 297
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLRA+HMKE+PDYKY+PRRK K
Sbjct: 98 EKRPFIDEAKRLRALHMKEYPDYKYKPRRKTK 129
>gi|297694438|ref|XP_002824485.1| PREDICTED: transcription factor SOX-1 [Pongo abelii]
Length = 373
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 98 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 126
>gi|270008206|gb|EFA04654.1| SoxNeuro [Tribolium castaneum]
Length = 336
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 127 EKRPFIDEAKRLRAVHMKEHPDYKYRPRR 155
>gi|196002954|ref|XP_002111344.1| hypothetical protein TRIADDRAFT_24518 [Trichoplax adhaerens]
gi|190585243|gb|EDV25311.1| hypothetical protein TRIADDRAFT_24518, partial [Trichoplax
adhaerens]
Length = 104
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 31/33 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRK K
Sbjct: 69 DKRPFIDEAKRLRALHMKEHPDYKYRPRRKNKA 101
>gi|157955417|gb|ABW06105.1| SRY-like HMG box protein 3 [Tachyglossus aculeatus]
Length = 53
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKE+PDYKYRPRRK KT
Sbjct: 18 EKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKT 50
>gi|256592644|gb|ACV03425.1| sex determining region Y-box 2 [Bubalus bubalis]
gi|259023881|gb|ACV90489.1| sex-determining region Y-box 2 [Bubalus bubalis]
Length = 321
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 30/33 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF DEAKRLRA+ MKEHPDYKYRPRRK KT
Sbjct: 90 EKRPFFDEAKRLRALLMKEHPDYKYRPRRKTKT 122
>gi|148690141|gb|EDL22088.1| SRY-box containing gene 1 [Mus musculus]
Length = 336
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 90 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 118
>gi|297274827|ref|XP_001097044.2| PREDICTED: hypothetical protein LOC708561 [Macaca mulatta]
Length = 472
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 97 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 125
>gi|392356265|ref|XP_003752300.1| PREDICTED: transcription factor SOX-1-like, partial [Rattus
norvegicus]
Length = 181
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 96 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 124
>gi|110626161|ref|NP_571777.1| transcription factor Sox-19b [Danio rerio]
gi|82568662|dbj|BAE48586.1| transcription factor SOX19B [Danio rerio]
Length = 293
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
+EKRPFIDEAKRLRA+HMKE+PDYKY+PRRK K
Sbjct: 97 VEKRPFIDEAKRLRAVHMKEYPDYKYKPRRKTK 129
>gi|391326901|ref|XP_003737948.1| PREDICTED: uncharacterized protein LOC100900235 [Metaseiulus
occidentalis]
Length = 321
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 49/87 (56%), Gaps = 18/87 (20%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPA-PTSASNAFP 60
+KRPFIDEAKRLR HM++HP+YKYRPRRKPK PA P S+ N F
Sbjct: 187 QKRPFIDEAKRLREQHMRDHPEYKYRPRRKPK----------------PATPMSSYNPF- 229
Query: 61 SFPLPPYFANHGGGSHPHPLDSLSAAY 87
+ P Y + S P P+ S +AY
Sbjct: 230 ALPYMNYIGSQLSNSSPQPVRSPESAY 256
>gi|156723185|dbj|BAF76752.1| sex determining region Y box 3 [Glandirana rugosa]
Length = 306
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 85 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 113
>gi|82177535|sp|Q9DDD7.1|SX19B_DANRE RecName: Full=Transcription factor Sox-19b; AltName: Full=Protein
sox-31
gi|10443169|emb|CAC10492.1| Sox31 protein [Danio rerio]
gi|34783811|gb|AAH56835.1| SRY-box containing gene 19b [Danio rerio]
Length = 292
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
+EKRPFIDEAKRLRA+HMKE+PDYKY+PRRK K
Sbjct: 96 VEKRPFIDEAKRLRAVHMKEYPDYKYKPRRKTK 128
>gi|356995559|dbj|BAL14716.1| transcription factor SOX3 [Cynops pyrrhogaster]
Length = 309
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 85 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 113
>gi|33504475|emb|CAE30461.1| uSoxB protein [Patella vulgata]
Length = 263
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 32/35 (91%), Gaps = 2/35 (5%)
Query: 2 EKRPF--IDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF IDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 69 EKRPFPFIDEAKRLRAIHMKEHPDYKYRPRRKTKT 103
>gi|384081149|dbj|BAM11010.1| sex determining region Y box 3, partial [Buergeria buergeri]
Length = 305
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 85 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 113
>gi|410906537|ref|XP_003966748.1| PREDICTED: transcription factor Sox-19a-like [Takifugu rubripes]
Length = 300
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLRA+HMKE+PDYKY+PRRK K
Sbjct: 99 EKRPFIDEAKRLRAVHMKEYPDYKYKPRRKTK 130
>gi|78499639|gb|ABB45832.1| SRY box3 [Taeniopygia guttata]
Length = 250
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 27 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 55
>gi|47215961|emb|CAF96363.1| unnamed protein product [Tetraodon nigroviridis]
Length = 106
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/32 (90%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKP+
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPR 84
>gi|55926072|ref|NP_001007502.1| transcription factor Sox-3 [Xenopus (Silurana) tropicalis]
gi|82181835|sp|Q68FA4.1|SOX3_XENTR RecName: Full=Transcription factor Sox-3
gi|51261384|gb|AAH79938.1| SRY (sex determining region Y)-box 3 [Xenopus (Silurana)
tropicalis]
Length = 307
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 85 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 113
>gi|226983|prf||1612347B Sra1 gene
Length = 94
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 53 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 81
>gi|449498778|ref|XP_002199662.2| PREDICTED: transcription factor SOX-3 [Taeniopygia guttata]
Length = 318
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 95 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 123
>gi|432105612|gb|ELK31806.1| Protein SOX-15 [Myotis davidii]
Length = 178
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 35/40 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN 41
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G +P+
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKSAGAGLPH 133
>gi|45383726|ref|NP_989526.1| SRY-related protein CH3 [Gallus gallus]
gi|2947027|dbj|BAA25093.1| SOX3 [Gallus gallus]
gi|410442441|dbj|BAM65602.1| transcription factor SOX3 [Gallus gallus]
Length = 316
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 93 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 121
>gi|334350301|ref|XP_001367325.2| PREDICTED: hypothetical protein LOC100012946 [Monodelphis
domestica]
Length = 745
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 505 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 533
>gi|345309896|ref|XP_001517289.2| PREDICTED: transcription factor SOX-1-like, partial
[Ornithorhynchus anatinus]
Length = 112
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 47 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 75
>gi|395836496|ref|XP_003791190.1| PREDICTED: protein SOX-15 [Otolemur garnettii]
Length = 229
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIP----NNKSPNQGAP------A 51
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G P S G P
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSGAGTPHFSQGRVSLASGGPLWGPVYT 153
Query: 52 PTSASNAFPSFPLPPYFANHGGGSHPHP 79
T AS F P P Y + G SH P
Sbjct: 154 TTQASRGFGYRP-PNYLPGNYGSSHCKP 180
>gi|344290162|ref|XP_003416807.1| PREDICTED: protein SOX-15-like [Loxodonta africana]
Length = 225
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 35/40 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN 41
EKRPF++EAKRLRA H++++PDYKYRPRRK K+PG P+
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKSPGTRPPH 133
>gi|348557895|ref|XP_003464754.1| PREDICTED: transcription factor SOX-3-like [Cavia porcellus]
Length = 449
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 188 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 216
>gi|341942056|sp|P53784.2|SOX3_MOUSE RecName: Full=Transcription factor SOX-3
gi|30024610|dbj|BAC75669.1| transcriptional factor SOX3 [Mus musculus]
Length = 375
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 114 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 142
>gi|1351093|sp|P48433.1|SOX3_CHICK RecName: Full=Transcription factor SOX-3; Short=cSox3
gi|595488|gb|AAA76598.1| Sox3 transcription factor [Gallus gallus]
Length = 312
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 91 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 119
>gi|291408541|ref|XP_002720573.1| PREDICTED: SRY (sex determining region Y)-box 3 [Oryctolagus
cuniculus]
Length = 445
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 212
>gi|335306596|ref|XP_003360512.1| PREDICTED: transcription factor SOX-3-like [Sus scrofa]
Length = 448
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 187 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 215
>gi|66364546|gb|AAH96018.1| Sox3 protein, partial [Mus musculus]
Length = 436
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 175 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 203
>gi|17530193|gb|AAL40744.1|AF434675_1 transcription factor SOX3 [Mus musculus]
gi|1209432|emb|CAA63845.1| SOX3 protein [Mus musculus]
Length = 375
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 114 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 142
>gi|213958597|gb|ACJ54695.1| SRY-like HMG box protein 21a [Odorrana schmackeri]
Length = 71
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/28 (100%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRAMHMKEHPDYKYRPR
Sbjct: 44 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 71
>gi|38969719|gb|AAH63061.1| Sox3 protein, partial [Mus musculus]
Length = 448
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 187 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 215
>gi|54694983|gb|AAV38123.1| sox transcription factor 2 [Acipenser schrenckii]
Length = 77
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 49 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 77
>gi|297711208|ref|XP_002832242.1| PREDICTED: transcription factor SOX-3 isoform 1 [Pongo abelii]
Length = 485
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 212
>gi|56079449|gb|AAH52024.1| Sox3 protein, partial [Mus musculus]
Length = 449
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 188 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 216
>gi|332247006|ref|XP_003272646.1| PREDICTED: transcription factor SOX-3 [Nomascus leucogenys]
Length = 446
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 212
>gi|156766077|ref|NP_033263.2| transcription factor SOX-3 [Mus musculus]
Length = 450
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 189 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 217
>gi|302563325|ref|NP_001180681.1| transcription factor SOX-3 [Macaca mulatta]
Length = 446
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 212
>gi|149457421|ref|XP_001520781.1| PREDICTED: transcription factor Sox-3-like, partial
[Ornithorhynchus anatinus]
Length = 220
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 15 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 43
>gi|389567450|gb|AFK84449.1| SRY-box containing protein 2, partial [Plestiodon chinensis]
Length = 72
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/28 (100%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRAMHMKEHPDYKYRPR
Sbjct: 45 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 72
>gi|530020|emb|CAA50465.1| SOX3 [Homo sapiens]
Length = 443
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 212
>gi|30061556|ref|NP_005625.2| transcription factor SOX-3 [Homo sapiens]
gi|48429228|sp|P41225.2|SOX3_HUMAN RecName: Full=Transcription factor SOX-3
gi|8118618|gb|AAF73059.1|AF264713_1 sex determining region Y box 3 [Homo sapiens]
gi|62739570|gb|AAH93863.1| SRY (sex determining region Y)-box 3 [Homo sapiens]
gi|62739572|gb|AAH93865.1| SRY (sex determining region Y)-box 3 [Homo sapiens]
gi|119608828|gb|EAW88422.1| SRY (sex determining region Y)-box 3 [Homo sapiens]
Length = 446
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 212
>gi|426397608|ref|XP_004065409.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-3 [Gorilla
gorilla gorilla]
Length = 427
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 212
>gi|74008585|ref|XP_852934.1| PREDICTED: transcription factor SOX-3 isoform 2 [Canis lupus
familiaris]
Length = 444
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 212
>gi|156359418|ref|XP_001624766.1| predicted protein [Nematostella vectensis]
gi|156211565|gb|EDO32666.1| predicted protein [Nematostella vectensis]
Length = 240
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+K+PF++EAK+LRA HMKEHPDYKYRPRRKPK+
Sbjct: 55 DKKPFVEEAKKLRAQHMKEHPDYKYRPRRKPKS 87
>gi|211907085|gb|ACJ12077.1| SOX3, partial [Bombina orientalis]
Length = 262
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/29 (89%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMK++PDYKYRPRR
Sbjct: 43 EKRPFIDEAKRLRAVHMKDYPDYKYRPRR 71
>gi|311268317|ref|XP_003131994.1| PREDICTED: protein SOX-15-like [Sus scrofa]
Length = 233
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK KT G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKTSG 128
>gi|402911621|ref|XP_003918415.1| PREDICTED: transcription factor SOX-3 [Papio anubis]
Length = 425
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 212
>gi|313217077|emb|CBY38259.1| unnamed protein product [Oikopleura dioica]
Length = 340
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 10/58 (17%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGA----PAPTSA 55
EK PF+DEAKRLRA HMKEHPDYKYRPRR+ + P++ S + A PAP A
Sbjct: 21 EKVPFVDEAKRLRAQHMKEHPDYKYRPRRRQR------PSDSSKTEAARTELPAPAQA 72
>gi|290648380|ref|NP_001166875.1| transcription factor Sox-3-B [Xenopus laevis]
gi|82179063|sp|Q5FWM3.1|SOX3B_XENLA RecName: Full=Transcription factor Sox-3-B; AltName:
Full=Transcription factor Sox-11; Short=xSox-11
gi|58399099|gb|AAH89283.1| Unknown (protein for MGC:84925) [Xenopus laevis]
Length = 307
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/29 (89%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMK++PDYKYRPRR
Sbjct: 85 EKRPFIDEAKRLRAVHMKDYPDYKYRPRR 113
>gi|73913045|gb|AAZ91460.1| SOX1 [Ornithorhynchus anatinus]
Length = 73
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 13 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 41
>gi|426237536|ref|XP_004012716.1| PREDICTED: protein SOX-15 [Ovis aries]
Length = 233
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPF++EAKRLRA H++++PDYKYRPRRK K G P+ NQG+ + +
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKNAGAGSPHF---NQGSGGVAGSGPVWG- 149
Query: 62 FPLPPYFANHG 72
P Y AN G
Sbjct: 150 ---PGYAANQG 157
>gi|298106610|gb|ADI55813.1| transcription factor SOX-3 [Macaca nemestrina]
Length = 301
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 178 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 206
>gi|291227557|ref|XP_002733748.1| PREDICTED: Sox21b-like [Saccoglossus kowalevskii]
Length = 179
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK-TPGQS 38
MEKRPFIDEA RL+ H KEHPDYKY+P+RK K TPG+S
Sbjct: 50 MEKRPFIDEANRLKQQHAKEHPDYKYQPKRKRKVTPGKS 88
>gi|298106598|gb|ADI55807.1| transcription factor SOX-3 [Macaca nemestrina]
Length = 313
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 181 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 209
>gi|298106600|gb|ADI55808.1| transcription factor SOX-3 [Macaca nemestrina]
gi|298106602|gb|ADI55809.1| transcription factor SOX-3 [Macaca nemestrina]
Length = 313
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 181 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 209
>gi|298106594|gb|ADI55805.1| transcription factor SOX-3 [Macaca nemestrina]
gi|298106596|gb|ADI55806.1| transcription factor SOX-3 [Macaca nemestrina]
gi|298106604|gb|ADI55810.1| transcription factor SOX-3 [Macaca nemestrina]
Length = 313
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 181 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 209
>gi|298106582|gb|ADI55799.1| transcription factor SOX-3 [Macaca nigra]
Length = 270
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 181 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 209
>gi|313227606|emb|CBY22753.1| unnamed protein product [Oikopleura dioica]
Length = 372
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 10/58 (17%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGA----PAPTSA 55
EK PF+DEAKRLRA HMKEHPDYKYRPRR+ + P++ S + A PAP A
Sbjct: 53 EKVPFVDEAKRLRAQHMKEHPDYKYRPRRRQR------PSDSSKTEAARTELPAPAQA 104
>gi|298106606|gb|ADI55811.1| transcription factor SOX-3 [Macaca nemestrina]
gi|298106608|gb|ADI55812.1| transcription factor SOX-3 [Macaca nemestrina]
gi|298106612|gb|ADI55814.1| transcription factor SOX-3 [Macaca nemestrina]
Length = 313
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 181 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 209
>gi|298106586|gb|ADI55801.1| transcription factor SOX-3 [Macaca maura]
gi|298106588|gb|ADI55802.1| transcription factor SOX-3 [Macaca tonkeana]
gi|298106590|gb|ADI55803.1| transcription factor SOX-3 [Macaca tonkeana]
gi|298106614|gb|ADI55815.1| transcription factor SOX-3 [Macaca fascicularis]
Length = 313
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 181 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 209
>gi|298106580|gb|ADI55798.1| transcription factor SOX-3 [Macaca hecki]
gi|298106584|gb|ADI55800.1| transcription factor SOX-3 [Macaca tonkeana]
Length = 303
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 181 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 209
>gi|344297733|ref|XP_003420551.1| PREDICTED: transcription factor SOX-3-like [Loxodonta africana]
Length = 691
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 427 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 455
>gi|108773454|gb|ABG11753.1| SRY-box containing transcription factor 14a [Oreochromis
niloticus]
Length = 75
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/30 (93%), Positives = 29/30 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRP+IDEAKRLRA HMKEHPDYKYRPRRK
Sbjct: 46 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRK 75
>gi|298106592|gb|ADI55804.1| transcription factor SOX-3 [Macaca tonkeana]
Length = 304
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 172 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 200
>gi|91083769|ref|XP_972072.1| PREDICTED: similar to Sox21b CG32139-PA [Tribolium castaneum]
Length = 207
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 29/32 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLR HM +HPDYKYRPRRKPK
Sbjct: 55 EKRPFIDEAKRLRNQHMVDHPDYKYRPRRKPK 86
>gi|355729747|gb|AES09971.1| zinc finger and BTB domain containing 4 [Mustela putorius furo]
Length = 101
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 34/40 (85%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN 41
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G P+
Sbjct: 31 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSGAGAPH 70
>gi|392343513|ref|XP_003754907.1| PREDICTED: transcription factor SOX-3-like [Rattus norvegicus]
Length = 345
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 188 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 216
>gi|270007906|gb|EFA04354.1| hypothetical protein TcasGA2_TC014650 [Tribolium castaneum]
Length = 205
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 29/32 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLR HM +HPDYKYRPRRKPK
Sbjct: 55 EKRPFIDEAKRLRNQHMVDHPDYKYRPRRKPK 86
>gi|108773456|gb|ABG11754.1| SRY-box containing transcription factor 14b [Oreochromis
niloticus]
Length = 75
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/30 (93%), Positives = 29/30 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRP+IDEAKRLRA HMKEHPDYKYRPRRK
Sbjct: 46 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRK 75
>gi|395546058|ref|XP_003774911.1| PREDICTED: transcription factor SOX-3-like [Sarcophilus harrisii]
Length = 597
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 388 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 416
>gi|355705212|gb|EHH31137.1| hypothetical protein EGK_21005, partial [Macaca mulatta]
Length = 236
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 212
>gi|88861942|gb|ABD52878.1| sex determining region Y-box 2 [Sus scrofa]
Length = 68
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMKEHPDYKYRPR
Sbjct: 41 EKRPFIDEAKRLRALHMKEHPDYKYRPR 68
>gi|195028879|ref|XP_001987303.1| GH20045 [Drosophila grimshawi]
gi|193903303|gb|EDW02170.1| GH20045 [Drosophila grimshawi]
Length = 817
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN--NKSPN---QGAPAPTSAS 56
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ ++I + K P+ A +AS
Sbjct: 268 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRTISSQPGKEPSGEMTTTVAAMAAS 327
Query: 57 NAFPSFPLPPYFANHGGGSHPHPLD 81
P PP A GS+ P D
Sbjct: 328 KTTPKLSTPPLSATATSGSYNTPTD 352
>gi|7579912|gb|AAB30154.2| testis-determining protein [Sminthopsis macroura]
Length = 224
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 100 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 128
>gi|281339439|gb|EFB15023.1| hypothetical protein PANDA_018415 [Ailuropoda melanoleuca]
Length = 228
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 176 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 204
>gi|340374302|ref|XP_003385677.1| PREDICTED: hypothetical protein LOC100632156 [Amphimedon
queenslandica]
Length = 437
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 31/34 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP 35
+KRPFIDEAKRLR HMK+HP+YKY+P+RK +TP
Sbjct: 119 DKRPFIDEAKRLREAHMKKHPNYKYKPKRKKQTP 152
>gi|238836404|gb|ACR61410.1| Sox21 [Pelophylax plancyi]
Length = 68
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKEHPDYKYRP
Sbjct: 42 EKRPFIDEAKRLRAMHMKEHPDYKYRP 68
>gi|198246569|gb|ACH82235.1| sox1a [Bombina maxima]
Length = 71
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMKEHPDYKYRPR
Sbjct: 44 EKRPFIDEAKRLRALHMKEHPDYKYRPR 71
>gi|391326897|ref|XP_003737946.1| PREDICTED: uncharacterized protein LOC100899948 [Metaseiulus
occidentalis]
Length = 335
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 30/32 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
E++PFIDEAKRLR HM++HP+YKYRPRRKPK
Sbjct: 185 ERKPFIDEAKRLREQHMRDHPEYKYRPRRKPK 216
>gi|218669753|gb|ACL00353.1| SRY-like HMG box protein 21 [Odorrana livida]
Length = 69
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRAMHMKEHP+YKYRPR
Sbjct: 42 EKRPFIDEAKRLRAMHMKEHPNYKYRPR 69
>gi|356690348|gb|AET36673.1| sox [Paramisgurnus dabryanus]
Length = 68
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKEHPDYKYRP
Sbjct: 42 EKRPFIDEAKRLRAMHMKEHPDYKYRP 68
>gi|160420229|ref|NP_001084148.1| transcription factor Sox-3-A [Xenopus laevis]
gi|2495258|sp|P55863.1|SOX3A_XENLA RecName: Full=Transcription factor Sox-3-A; Short=xSox3; AltName:
Full=xSox-B1
gi|1771974|emb|CAA68828.1| SOX3 protein [Xenopus laevis]
gi|47937642|gb|AAH72222.1| Sox3 protein [Xenopus laevis]
gi|156713279|dbj|BAF76379.1| xSox-B1 [Xenopus laevis]
Length = 309
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/29 (86%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
+KRPFIDEAKRLRA+HMK++PDYKYRPRR
Sbjct: 85 DKRPFIDEAKRLRAVHMKDYPDYKYRPRR 113
>gi|194883150|ref|XP_001975666.1| GG22439 [Drosophila erecta]
gi|190658853|gb|EDV56066.1| GG22439 [Drosophila erecta]
Length = 789
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT------PGQSIPNNKSPNQGAPAPTS 54
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ PG N SPN G P S
Sbjct: 260 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKDQNESSPNPGTGGPKS 318
>gi|167859589|gb|ACA04749.1| SoxB1-like [Amphimedon queenslandica]
Length = 437
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 31/34 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP 35
+KRPFIDEAKRLR HMK+HP+YKY+P+RK +TP
Sbjct: 119 DKRPFIDEAKRLREAHMKKHPNYKYKPKRKKQTP 152
>gi|189409063|ref|NP_001121578.1| SoxF protein [Ciona intestinalis]
gi|70571254|dbj|BAE06709.1| transcription factor protein [Ciona intestinalis]
Length = 796
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP 35
+KRP+I EA++LR HM+EHPDYKYRPRRKPK P
Sbjct: 225 DKRPYITEAEKLRMKHMQEHPDYKYRPRRKPKEP 258
>gi|431894016|gb|ELK03822.1| Protein SOX-15 [Pteropus alecto]
Length = 232
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN 41
EKRPF++EAKRLRA H++++PDYKYRPRRK K G P+
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKNSGAGAPH 133
>gi|262235750|gb|ACY39735.1| SRY-box containing protein 2 [Peromyscus polionotus subgriseus]
gi|262235752|gb|ACY39736.1| SRY-box containing protein 2 [Peromyscus maniculatus bairdii]
Length = 51
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMKEHPDYKYRPR
Sbjct: 24 EKRPFIDEAKRLRALHMKEHPDYKYRPR 51
>gi|356690346|gb|AET36672.1| sox [Paramisgurnus dabryanus]
Length = 68
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKEHPDYKYRP
Sbjct: 42 EKRPFIDEAKRLRAMHMKEHPDYKYRP 68
>gi|348554033|ref|XP_003462830.1| PREDICTED: transcription factor SOX-18-like [Cavia porcellus]
Length = 375
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 13/94 (13%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-------PGQSIPNNKSPNQGAPAPTS 54
EKRPF++EA+RLR H+++HP+YKYRPRRK + PG +P+ P++ PA
Sbjct: 124 EKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKARRLEPGLLLPSLAPPSESYPAAPG 183
Query: 55 ASNAFPSFPLPPYFANHGGGSHP----HPLDSLS 84
++AF LPP A G P PLD L
Sbjct: 184 PAHAFRE--LPPLGAELDGLGLPTPERSPLDGLE 215
>gi|40642799|emb|CAD58843.1| SoxF protein [Ciona intestinalis]
Length = 458
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP 35
+KRP+I EA++LR HM+EHPDYKYRPRRKPK P
Sbjct: 225 DKRPYITEAEKLRMKHMQEHPDYKYRPRRKPKEP 258
>gi|237507255|gb|ACQ99333.1| HMG-box transcription factor Sox21b [Carassius carassius red var
x Cyprinus carpio]
Length = 71
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKEHPDYKYRP
Sbjct: 45 EKRPFIDEAKRLRAMHMKEHPDYKYRP 71
>gi|194475166|gb|ACF74534.1| Sox1 [Carassius cuvieri]
Length = 71
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKEHPDYKYRP
Sbjct: 45 EKRPFIDEAKRLRAMHMKEHPDYKYRP 71
>gi|163676258|gb|ABY40358.1| HMG-box transcription factor Sox1 [Carassius carassius red var x
Megalobrama amblycephala]
gi|166218468|gb|ABY85277.1| HMG-box sox protein 1 [diploid improved red crucian carp]
gi|237507251|gb|ACQ99331.1| HMG-box transcription factor Sox1 [Carassius carassius red var x
Cyprinus carpio]
gi|336126631|gb|AEI17775.1| HMG-box transcription factor Sox1 [Megalobrama amblycephala]
gi|336126633|gb|AEI17776.1| HMG-box transcription factor Sox1 [Xenocypris davidi]
gi|336126635|gb|AEI17777.1| HMG-box transcription factor Sox1 [diploid Megalobrama
amblycephala x Xenocypris davidi]
gi|336126637|gb|AEI17778.1| HMG-box transcription factor Sox1 [triploid Megalobrama
amblycephala x Xenocypris davidi]
gi|336126639|gb|AEI17779.1| HMG-box transcription factor Sox1 [diploid Xenocypris davidi x
Megalobrama amblycephala]
gi|340523190|gb|AEK48082.1| transcription factor SOX1 [Chanodichthys dabryi]
Length = 71
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKEHPDYKYRP
Sbjct: 45 EKRPFIDEAKRLRAMHMKEHPDYKYRP 71
>gi|440906832|gb|ELR57052.1| Protein SOX-15 [Bos grunniens mutus]
Length = 233
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 34/40 (85%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN 41
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G P+
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKSAGAGSPH 133
>gi|194475164|gb|ACF74533.1| Sox1 [Ctenopharyngodon idella]
Length = 71
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKEHPDYKYRP
Sbjct: 45 EKRPFIDEAKRLRAMHMKEHPDYKYRP 71
>gi|300797081|ref|NP_001179004.1| protein SOX-15 [Bos taurus]
gi|296476676|tpg|DAA18791.1| TPA: SRY-box 15-like [Bos taurus]
Length = 233
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 34/40 (85%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN 41
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G P+
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKSKSAGAGSPH 133
>gi|24653574|ref|NP_523739.2| Sox box protein 15 [Drosophila melanogaster]
gi|13124823|sp|P40657.2|SOX15_DROME RecName: Full=Putative transcription factor SOX-15; AltName:
Full=Sox50E
gi|10727557|gb|AAF58279.2| Sox box protein 15 [Drosophila melanogaster]
gi|94400487|gb|ABF17895.1| FI01112p [Drosophila melanogaster]
gi|220952066|gb|ACL88576.1| Sox15-PA [synthetic construct]
Length = 784
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI-PNNKSPNQGAPAP-TSASNAF 59
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ +++ P K ++ +P P T S +
Sbjct: 260 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSN 319
Query: 60 PSFPLPP 66
P PP
Sbjct: 320 PKLATPP 326
>gi|226985|prf||1612347D Sra3 gene
Length = 94
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 53 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 81
>gi|345322378|ref|XP_003430567.1| PREDICTED: transcription factor Sox-3-like, partial
[Ornithorhynchus anatinus]
Length = 201
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 153 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 181
>gi|195334272|ref|XP_002033808.1| GM20225 [Drosophila sechellia]
gi|194125778|gb|EDW47821.1| GM20225 [Drosophila sechellia]
Length = 784
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI-PNNKSPNQGAPAP-TSASNAF 59
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ +++ P K ++ +P P T S +
Sbjct: 260 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSN 319
Query: 60 PSFPLPP 66
P PP
Sbjct: 320 PKLATPP 326
>gi|403274966|ref|XP_003929231.1| PREDICTED: protein SOX-15 [Saimiri boliviensis boliviensis]
Length = 233
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSAG 128
>gi|149724934|ref|XP_001504833.1| PREDICTED: protein SOX-15-like [Equus caballus]
Length = 233
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKSSG 128
>gi|108773460|gb|ABG11756.1| SRY-box containing transcription factor 19 [Oreochromis
niloticus]
Length = 75
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/30 (90%), Positives = 30/30 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPFIDEAKRLRA+HMKE+PDYKY+PRRK
Sbjct: 46 EKRPFIDEAKRLRAVHMKEYPDYKYKPRRK 75
>gi|363412426|gb|AEW23000.1| transcription factor SOX2 [Haplopelma schmidti]
Length = 71
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRP 28
+EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 44 LEKRPFIDEAKRLRALHMKEHPDYKYRP 71
>gi|351701573|gb|EHB04492.1| Protein SOX-15 [Heterocephalus glaber]
Length = 229
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKSSG 128
>gi|6624902|emb|CAB63944.1| Sox50E protein [Drosophila melanogaster]
Length = 718
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI-PNNKSPNQGAPAP-TSASNAF 59
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ +++ P K ++ +P P T S +
Sbjct: 260 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSN 319
Query: 60 PSFPLPP 66
P PP
Sbjct: 320 PKLATPP 326
>gi|74315419|gb|ABA02360.1| sox family protein 1 [Nematostella vectensis]
Length = 240
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 31/33 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+K+PF++EAK+LRA HMKEHPDYKYRPRR PK+
Sbjct: 55 DKKPFVEEAKKLRAQHMKEHPDYKYRPRRMPKS 87
>gi|195485887|ref|XP_002091275.1| GE12330 [Drosophila yakuba]
gi|194177376|gb|EDW90987.1| GE12330 [Drosophila yakuba]
Length = 791
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI-PNNKSPNQGAPAP-TSASNAF 59
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ +++ P K ++ +P P T S
Sbjct: 260 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKTN 319
Query: 60 PSFPLPP 66
P PP
Sbjct: 320 PKLATPP 326
>gi|260794135|ref|XP_002592065.1| hypothetical protein BRAFLDRAFT_130889 [Branchiostoma floridae]
gi|229277279|gb|EEN48076.1| hypothetical protein BRAFLDRAFT_130889 [Branchiostoma floridae]
Length = 310
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 30/32 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EK+PF+DE+KRLRA HM+EHPDYKYRPRRK K
Sbjct: 72 EKKPFVDESKRLRAKHMEEHPDYKYRPRRKMK 103
>gi|256066231|ref|XP_002570500.1| sox transcription factor [Schistosoma mansoni]
gi|350646531|emb|CCD58841.1| sox transcription factor [Schistosoma mansoni]
Length = 89
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 29/32 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLR HMK +PDYKYRPRRKPK
Sbjct: 42 EKRPFIDEAKRLRVNHMKAYPDYKYRPRRKPK 73
>gi|33415920|gb|AAQ18497.1| transcription factor Sox19 [Takifugu rubripes]
Length = 299
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFI++AKRLRA+HMKE+PDYKY+PRRK K
Sbjct: 99 EKRPFIEKAKRLRAVHMKEYPDYKYKPRRKTK 130
>gi|345800202|ref|XP_003434661.1| PREDICTED: protein SOX-15 [Canis lupus familiaris]
Length = 233
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 34/40 (85%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN 41
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G P+
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKSSGAGPPH 133
>gi|213958599|gb|ACJ54696.1| SRY-like HMG box protein 21b [Odorrana schmackeri]
Length = 71
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/28 (96%), Positives = 27/28 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRAM MKEHPDYKYRPR
Sbjct: 44 EKRPFIDEAKRLRAMRMKEHPDYKYRPR 71
>gi|221118636|ref|XP_002161378.1| PREDICTED: uncharacterized protein LOC100205840 [Hydra
magnipapillata]
Length = 387
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 28/33 (84%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EK PF+ EAKRLRA HMK HPDYKYRPRRK KT
Sbjct: 108 EKAPFVFEAKRLRAEHMKSHPDYKYRPRRKAKT 140
>gi|402898613|ref|XP_003912315.1| PREDICTED: protein SOX-15 [Papio anubis]
Length = 233
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSG 128
>gi|388594936|gb|AFK74894.1| transcription factor HySox1/2/3 [Expression vector pPyCAG_BstXI_IB]
Length = 387
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 28/33 (84%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EK PF+ EAKRLRA HMK HPDYKYRPRRK KT
Sbjct: 108 EKAPFVFEAKRLRAEHMKSHPDYKYRPRRKAKT 140
>gi|291405125|ref|XP_002718842.1| PREDICTED: SRY-box 15 [Oryctolagus cuniculus]
Length = 227
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K G
Sbjct: 93 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKNSG 127
>gi|238836406|gb|ACR61411.1| Sox1 [Pelophylax plancyi]
Length = 68
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 42 EKRPFIDEAKRLRALHMKEHPDYKYRP 68
>gi|194377196|dbj|BAG63159.1| unnamed protein product [Homo sapiens]
Length = 178
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSG 128
>gi|259013313|ref|NP_001158450.1| sox7/17 protein [Saccoglossus kowalevskii]
gi|197734709|gb|ACH73250.1| sox7/17 protein [Saccoglossus kowalevskii]
Length = 471
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 31/37 (83%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQ 37
++KRPF++EA+RLR HM +HPDYKYRPRR+ K P +
Sbjct: 73 VQKRPFVEEAERLRVQHMTDHPDYKYRPRRRNKQPKR 109
>gi|391327129|ref|XP_003738059.1| PREDICTED: uncharacterized protein LOC100908535 [Metaseiulus
occidentalis]
Length = 294
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 66/154 (42%), Gaps = 39/154 (25%)
Query: 3 KRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPSF 62
KRPFI+EAKRLRA HMKEHPDYKY+PRRKPK+ S + P P
Sbjct: 55 KRPFIEEAKRLRAQHMKEHPDYKYKPRRKPKS-------TSSAERQQP---------PKK 98
Query: 63 PLPPYFANHGGGSHPHPLDSLSAAYPPMNMPH----YFGSPFDAMNFSKLVQG------- 111
PP++ G +N+P + G A N + +
Sbjct: 99 EFPPFYEYLGRDDEKR-----------LNVPLPQHPFLGRLVPASNQTTSLTDHRISPPK 147
Query: 112 QTSQADTKSSNAAAAVVSSFYSSLYPS-VTSAQT 144
+T++ D + S SS Y SLY VT Q
Sbjct: 148 ETAKCDAEQSAPTEFASSSVYPSLYQQWVTGCQC 181
>gi|355568198|gb|EHH24479.1| Protein SOX-20 [Macaca mulatta]
Length = 233
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSG 128
>gi|356690360|gb|AET36679.1| sox [Paramisgurnus dabryanus]
Length = 68
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 42 EKRPFIDEAKRLRALHMKEHPDYKYRP 68
>gi|357605025|gb|EHJ64439.1| putative transcription factor SOX-14 [Danaus plexippus]
Length = 224
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 31/36 (86%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQ 37
E++PFIDEA+RLR +HM+E+PDYKYRPR+K P Q
Sbjct: 42 ERQPFIDEAERLRQLHMREYPDYKYRPRKKTAKPAQ 77
>gi|296201375|ref|XP_002748003.1| PREDICTED: protein SOX-15-like [Callithrix jacchus]
Length = 233
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSAG 128
>gi|363412399|gb|AEW22988.1| transcription factor SOX1 [Plestiodon chinensis]
Length = 71
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 45 EKRPFIDEAKRLRALHMKEHPDYKYRP 71
>gi|238836392|gb|ACR61404.1| Sox2 [Pelophylax plancyi]
Length = 68
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 42 EKRPFIDEAKRLRALHMKEHPDYKYRP 68
>gi|355753718|gb|EHH57683.1| Protein SOX-20 [Macaca fascicularis]
Length = 233
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSG 128
>gi|426383973|ref|XP_004058551.1| PREDICTED: protein SOX-15 [Gorilla gorilla gorilla]
Length = 233
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSG 128
>gi|399571761|gb|AFP48376.1| soxB [Schmidtea mediterranea]
Length = 539
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
+K+PFIDEAKRLRA HM ++PDYKYRPRRK K
Sbjct: 302 DKKPFIDEAKRLRANHMTQYPDYKYRPRRKHK 333
>gi|213958581|gb|ACJ54687.1| SRY-like HMG box protein 2 [Odorrana schmackeri]
Length = 71
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMKEHP+YKYRPR
Sbjct: 44 EKRPFIDEAKRLRALHMKEHPNYKYRPR 71
>gi|332251090|ref|XP_003274679.1| PREDICTED: protein SOX-15 [Nomascus leucogenys]
Length = 233
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSG 128
>gi|61371496|gb|AAX43677.1| SRY-box 15 [synthetic construct]
Length = 234
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSG 128
>gi|417408016|gb|JAA50582.1| Putative hmg-box transcription factor hmg-box transcription
factor, partial [Desmodus rotundus]
Length = 138
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIP 40
EKRPF++EAKRLRA H++++PDYKYRPRRK K +P
Sbjct: 54 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKNASAGLP 92
>gi|348560997|ref|XP_003466299.1| PREDICTED: protein SOX-15-like [Cavia porcellus]
Length = 216
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRR+ K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRRAKSAG 128
>gi|114666209|ref|XP_001171768.1| PREDICTED: protein SOX-15 [Pan troglodytes]
Length = 233
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSG 128
>gi|21436497|gb|AAM51630.1| SOX2 [Ornithorhynchus anatinus]
Length = 69
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 43 EKRPFIDEAKRLRALHMKEHPDYKYRP 69
>gi|397477545|ref|XP_003810130.1| PREDICTED: protein SOX-15 [Pan paniscus]
Length = 233
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSG 128
>gi|5902106|ref|NP_008873.1| protein SOX-15 [Homo sapiens]
gi|6094381|sp|O60248.1|SOX15_HUMAN RecName: Full=Protein SOX-15; AltName: Full=Protein SOX-12;
AltName: Full=Protein SOX-20
gi|3061310|dbj|BAA25663.1| hSOX20 protein [Homo sapiens]
gi|12654325|gb|AAH00985.1| SRY (sex determining region Y)-box 15 [Homo sapiens]
gi|47938388|gb|AAH72003.1| SOX15 protein [Homo sapiens]
gi|60654941|gb|AAX32035.1| SRY-box 15 [synthetic construct]
gi|119610562|gb|EAW90156.1| SRY (sex determining region Y)-box 15, isoform CRA_a [Homo sapiens]
gi|119610563|gb|EAW90157.1| SRY (sex determining region Y)-box 15, isoform CRA_a [Homo sapiens]
gi|123979666|gb|ABM81662.1| SRY (sex determining region Y)-box 15 [synthetic construct]
gi|123994465|gb|ABM84834.1| SRY (sex determining region Y)-box 15 [synthetic construct]
Length = 233
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSG 128
>gi|363412389|gb|AEW22984.1| transcription factor SOX1 [Rhacophorus dennysi]
Length = 71
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 45 EKRPFIDEAKRLRALHMKEHPDYKYRP 71
>gi|344237784|gb|EGV93887.1| Protein SOX-15 [Cricetulus griseus]
Length = 149
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K G
Sbjct: 42 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKSKNSG 76
>gi|160694407|gb|ABX46631.1| Sox2 [Cygnus columbianus]
gi|161075469|gb|ABX56486.1| Sox2 [Tadorna tadorna]
Length = 71
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 45 EKRPFIDEAKRLRALHMKEHPDYKYRP 71
>gi|198246571|gb|ACH82236.1| sox1b [Bombina maxima]
Length = 71
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMKEHP+YKYRPR
Sbjct: 44 EKRPFIDEAKRLRALHMKEHPNYKYRPR 71
>gi|89242273|gb|ABD64562.1| sox2b [Microhyla ornata]
Length = 71
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMKEHP+YKYRPR
Sbjct: 44 EKRPFIDEAKRLRALHMKEHPNYKYRPR 71
>gi|354469754|ref|XP_003497289.1| PREDICTED: protein SOX-15-like [Cricetulus griseus]
Length = 227
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K G
Sbjct: 92 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKSKNSG 126
>gi|392356046|ref|XP_003752199.1| PREDICTED: transcription factor SOX-3-like [Rattus norvegicus]
Length = 285
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMKE+PDYKYRPR
Sbjct: 188 EKRPFIDEAKRLRAVHMKEYPDYKYRPR 215
>gi|256082522|ref|XP_002577504.1| sox transcription factor [Schistosoma mansoni]
gi|353230594|emb|CCD77011.1| sox transcription factor [Schistosoma mansoni]
Length = 454
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
+K+PFIDEAKRLRA HM ++PDYKYRPRRK K
Sbjct: 42 DKKPFIDEAKRLRANHMAQYPDYKYRPRRKHK 73
>gi|259013588|ref|NP_001158342.1| SRY-box containing gene 8 [Oryzias latipes]
gi|227336642|gb|ACP21268.1| SRY-box containing gene 8 [Oryzias latipes]
Length = 465
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQS 38
EKRPF+DEA+RLR H K+HPDYKY+PRR+ PGQS
Sbjct: 145 EKRPFVDEAERLRVQHKKDHPDYKYQPRRRKNVKPGQS 182
>gi|356690354|gb|AET36676.1| sox [Paramisgurnus dabryanus]
Length = 68
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 42 EKRPFIDEAKRLRAVHMKEHPDYKYRP 68
>gi|91719184|gb|ABE57270.1| Sox21 protein [Panthera tigris altaica]
Length = 68
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKEHP+YKYRP
Sbjct: 42 EKRPFIDEAKRLRAMHMKEHPNYKYRP 68
>gi|51234105|gb|AAT97971.1| Sox21b protein [Paramisgurnus dabryanus]
Length = 69
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKEHP+YKYRP
Sbjct: 43 EKRPFIDEAKRLRAMHMKEHPNYKYRP 69
>gi|166218478|gb|ABY85280.1| HMG-box sox protein 21 [diploid improved black crucian carp]
Length = 71
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 45 EKRPFIDEAKRLRAVHMKEHPDYKYRP 71
>gi|297699922|ref|XP_002827011.1| PREDICTED: LOW QUALITY PROTEIN: protein SOX-15 [Pongo abelii]
Length = 233
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI 39
EKRPF++EAKRLRA H +++PDYKYRPRRK K+ G +
Sbjct: 94 EKRPFVEEAKRLRARHXRDYPDYKYRPRRKAKSSGAGL 131
>gi|32481087|gb|AAP83940.1| HMG-box transcription factor Sox21b [Cyprinus carpio]
Length = 69
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 43 EKRPFIDEAKRLRAVHMKEHPDYKYRP 69
>gi|237507261|gb|ACQ99336.1| HMG-box transcription factor Sox1 [Carassius carassius red var x
Cyprinus carpio]
Length = 71
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 45 EKRPFIDEAKRLRAVHMKEHPDYKYRP 71
>gi|218669751|gb|ACL00352.1| SRY-like HMG box protein 14 [Odorrana livida]
Length = 69
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRP+IDEAKRLRA HMKEHPDYKYRPR
Sbjct: 42 EKRPYIDEAKRLRAQHMKEHPDYKYRPR 69
>gi|383863867|ref|XP_003707401.1| PREDICTED: uncharacterized protein LOC100875283 [Megachile
rotundata]
Length = 477
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI 39
E+RPFI+EA+RLR +HM E+PDYKYRPR+K P S+
Sbjct: 74 ERRPFIEEAERLRQLHMMEYPDYKYRPRKKTSKPTASV 111
>gi|4186021|emb|CAA06920.1| SOX-20 protein [Homo sapiens]
Length = 142
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 3 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSG 37
>gi|348525306|ref|XP_003450163.1| PREDICTED: transcription factor Sox-8-like [Oreochromis niloticus]
Length = 464
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQS 38
EKRPF+DEA+RLR H K+HPDYKY+PRR+ PGQS
Sbjct: 145 EKRPFVDEAERLRVQHKKDHPDYKYQPRRRKNVKPGQS 182
>gi|218669745|gb|ACL00349.1| SRY-like HMG box protein 3b [Odorrana livida]
Length = 69
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMKE+PDYKYRPR
Sbjct: 42 EKRPFIDEAKRLRAVHMKEYPDYKYRPR 69
>gi|163676256|gb|ABY40357.1| HMG-box transcription factor Sox21 [Carassius carassius red var x
Megalobrama amblycephala]
Length = 71
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 45 EKRPFIDEAKRLRAVHMKEHPDYKYRP 71
>gi|218669743|gb|ACL00348.1| SRY-like HMG box protein 3a [Odorrana livida]
Length = 69
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMKE+PDYKYRPR
Sbjct: 42 EKRPFIDEAKRLRAVHMKEYPDYKYRPR 69
>gi|3165381|dbj|BAA28604.1| Sox15 [Mus musculus]
Length = 231
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPF++EAKRLRA H++++PDYKYRPRRK K
Sbjct: 92 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKSK 123
>gi|37730546|gb|AAO17702.1| PS47 protein [Pelodiscus sinensis]
Length = 72
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKE+PDYKYRP
Sbjct: 46 EKRPFIDEAKRLRAMHMKEYPDYKYRP 72
>gi|198246585|gb|ACH82243.1| sox14 [Bombina maxima]
Length = 71
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRP+IDEAKRLRA HMKEHPDYKYRPR
Sbjct: 44 EKRPYIDEAKRLRAQHMKEHPDYKYRPR 71
>gi|326439372|emb|CBK62691.1| SOX similarity protein [Suberites domuncula]
Length = 294
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAK++R HM +HP Y+YRPRRKPK
Sbjct: 56 EKRPYIDEAKKIREQHMIDHPGYRYRPRRKPK 87
>gi|389567438|gb|AFK84443.1| SRY-box containing protein 14, partial [Plestiodon chinensis]
gi|389567440|gb|AFK84444.1| SRY-box containing protein 14-1, partial [Plestiodon chinensis]
gi|389567442|gb|AFK84445.1| SRY-box containing protein 14-2, partial [Plestiodon chinensis]
gi|389567444|gb|AFK84446.1| SRY-box containing protein 14-3, partial [Plestiodon chinensis]
Length = 72
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRP+IDEAKRLRA HMKEHPDYKYRPR
Sbjct: 45 EKRPYIDEAKRLRAQHMKEHPDYKYRPR 72
>gi|57164983|gb|AAW34333.1| SoxF [Petromyzon marinus]
Length = 482
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF+DEA+RLR HM+EHP+YKYRPRRK
Sbjct: 131 EKRPFVDEAERLRIQHMQEHPNYKYRPRRK 160
>gi|22094091|ref|NP_033261.1| protein SOX-15 [Mus musculus]
gi|12644266|sp|P43267.3|SOX15_MOUSE RecName: Full=Protein SOX-15
gi|8099356|gb|AAF72108.1|AF182945_1 SOX15 [Mus musculus]
gi|74203494|dbj|BAE20901.1| unnamed protein product [Mus musculus]
gi|111599939|gb|AAI19068.1| SRY-box containing gene 15 [Mus musculus]
gi|111601076|gb|AAI19070.1| SRY-box containing gene 15 [Mus musculus]
Length = 231
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPF++EAKRLRA H++++PDYKYRPRRK K
Sbjct: 92 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKSK 123
>gi|240951830|ref|XP_002399247.1| hypothetical protein IscW_ISCW001638 [Ixodes scapularis]
gi|215490496|gb|EEC00139.1| hypothetical protein IscW_ISCW001638 [Ixodes scapularis]
Length = 583
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 31/36 (86%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
+EKRPF +EA+RLRA H ++HPDYKY+PRR+PK G
Sbjct: 128 IEKRPFTEEAERLRAAHKRDHPDYKYQPRRRPKAGG 163
>gi|47219051|emb|CAG00190.1| unnamed protein product [Tetraodon nigroviridis]
Length = 497
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQS 38
EKRPF+DEA+RLR H K+HPDYKY+PRR+ PGQS
Sbjct: 142 EKRPFVDEAERLRIQHKKDHPDYKYQPRRRKNVKPGQS 179
>gi|213958595|gb|ACJ54694.1| SRY-like HMG box protein 14b [Odorrana schmackeri]
Length = 71
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRP+IDEAKRLRA HMKEHPDYKYRPR
Sbjct: 44 EKRPYIDEAKRLRAQHMKEHPDYKYRPR 71
>gi|291235892|ref|XP_002737877.1| PREDICTED: transcription factor SOX9-like [Saccoglossus
kowalevskii]
Length = 456
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNNKSPNQGAPAPTSA 55
EK+PF+DEA+RLR H K+HPDYKY+PRR+ GQ + +S N +P P+S
Sbjct: 127 EKKPFVDEAERLRMQHKKDHPDYKYQPRRRKNVKNGQQNGSEESGNATSPIPSSG 181
>gi|29242817|gb|AAO67242.1| HMG-box transcription factor Sox1 [Cyprinus carpio]
Length = 69
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKEHPDYKY+P
Sbjct: 43 EKRPFIDEAKRLRAMHMKEHPDYKYQP 69
>gi|410979717|ref|XP_003996228.1| PREDICTED: protein SOX-15 [Felis catus]
Length = 233
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 31/33 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EAKRLRA H++++PDYKYRPRRK K+
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKS 126
>gi|213958593|gb|ACJ54693.1| SRY-like HMG box protein 14a [Odorrana schmackeri]
Length = 71
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRP+IDEAKRLRA HMKEHPDYKYRPR
Sbjct: 44 EKRPYIDEAKRLRAQHMKEHPDYKYRPR 71
>gi|381141859|gb|AFF57871.1| Sox8a [Epinephelus coioides]
gi|381141863|gb|AFF57873.1| Sox8a [Epinephelus coioides]
Length = 468
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP-RRKPKTPGQS 38
EKRPF+DEA+RLR H K+HPDYKY+P RRK PGQS
Sbjct: 145 EKRPFVDEAERLRVQHKKDHPDYKYQPRRRKNMKPGQS 182
>gi|198246573|gb|ACH82237.1| sox3a [Bombina maxima]
Length = 71
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMKE+PDYKYRPR
Sbjct: 44 EKRPFIDEAKRLRAVHMKEYPDYKYRPR 71
>gi|82582249|sp|Q6IZ48.2|SOX8_TETNG RecName: Full=Transcription factor Sox-8
Length = 462
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQS 38
EKRPF+DEA+RLR H K+HPDYKY+PRR+ PGQS
Sbjct: 145 EKRPFVDEAERLRIQHKKDHPDYKYQPRRRKNVKPGQS 182
>gi|15823174|dbj|BAB68738.1| HMG-box transcription factor [Mus musculus]
Length = 224
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPF++EAKRLRA H++++PDYKYRPRRK K
Sbjct: 85 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKSK 116
>gi|48375124|gb|AAT42231.1| transcription factor Sox 8 [Tetraodon nigroviridis]
Length = 462
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQS 38
EKRPF+DEA+RLR H K+HPDYKY+PRR+ PGQS
Sbjct: 145 EKRPFVDEAERLRIQHKKDHPDYKYQPRRRKNVKPGQS 182
>gi|194754393|ref|XP_001959479.1| GF12898 [Drosophila ananassae]
gi|190620777|gb|EDV36301.1| GF12898 [Drosophila ananassae]
Length = 784
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI-PNNKSPNQGAPAPTSASNAFP 60
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ +++ P K ++ +P P
Sbjct: 265 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRTLQPGGKEQSENSPNPVGGGGTKS 324
Query: 61 SFPL 64
S L
Sbjct: 325 SSKL 328
>gi|33415936|gb|AAQ18505.1| transcription factor Sox8a [Takifugu rubripes]
Length = 462
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP-RRKPKTPGQS 38
EKRPF+DEA+RLR H K+HPDYKY+P RRK PGQS
Sbjct: 145 EKRPFVDEAERLRIQHKKDHPDYKYQPRRRKNAKPGQS 182
>gi|118344654|ref|NP_001072112.1| DNA-binding transcription factor Sox8 [Takifugu rubripes]
gi|60549975|gb|AAX24132.1| DNA-binding transcription factor Sox8 [Takifugu rubripes]
Length = 462
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP-RRKPKTPGQS 38
EKRPF+DEA+RLR H K+HPDYKY+P RRK PGQS
Sbjct: 145 EKRPFVDEAERLRIQHKKDHPDYKYQPRRRKNAKPGQS 182
>gi|195997205|ref|XP_002108471.1| hypothetical protein TRIADDRAFT_19608 [Trichoplax adhaerens]
gi|190589247|gb|EDV29269.1| hypothetical protein TRIADDRAFT_19608 [Trichoplax adhaerens]
Length = 92
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+EKRPF+DEAK LR HMK+ PDYKYRPRRKPK+
Sbjct: 53 IEKRPFVDEAKHLRTQHMKDFPDYKYRPRRKPKS 86
>gi|358339281|dbj|GAA47373.1| transcription factor SOX1/2/3/14/21 [Clonorchis sinensis]
Length = 995
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+K+PFIDEAKRLRA HM ++PDYKYRPRRK
Sbjct: 427 DKKPFIDEAKRLRANHMAQYPDYKYRPRRK 456
>gi|57164981|gb|AAW34332.1| SoxE1 [Petromyzon marinus]
Length = 617
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAP 50
EKRPFI+EA+RLR H K+HPDYKY+PRR+ G + SP P
Sbjct: 169 EKRPFIEEAERLRVQHKKDHPDYKYQPRRRKSVKGSGDGDAASPCGADP 217
>gi|403300114|ref|XP_003940803.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-3 [Saimiri
boliviensis boliviensis]
Length = 293
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+PDYKYRP
Sbjct: 186 EKRPFIDEAKRLRAVHMKEYPDYKYRP 212
>gi|237648793|dbj|BAH58895.1| HMG box transcription factor SoxF(17/18) [Lethenteron
camtschaticum]
Length = 444
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF+DEA+RLR HM+EHP+YKYRPRRK
Sbjct: 116 EKRPFVDEAERLRIQHMQEHPNYKYRPRRK 145
>gi|443713759|gb|ELU06459.1| hypothetical protein CAPTEDRAFT_70604, partial [Capitella teleta]
Length = 75
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 30/31 (96%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
++KRPF+DEA+RLR +HM+EHPDYKYRPRR+
Sbjct: 45 IQKRPFVDEAERLRVLHMQEHPDYKYRPRRR 75
>gi|15823178|dbj|BAB68740.1| HMG-box transcription factor [Mus musculus musculus]
gi|15823180|dbj|BAB68741.1| HMG-box transcription factor [Mus musculus]
gi|15823182|dbj|BAB68742.1| HMG-box transcription factor [Mus musculus]
gi|15823186|dbj|BAB68744.1| HMG-box transcription factor [Mus musculus]
gi|15823188|dbj|BAB68745.1| HMG-box transcription factor [Mus musculus]
gi|15823190|dbj|BAB68746.1| HMG-box transcription factor [Mus musculus musculus]
Length = 224
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPF++EAKRLRA H++++PDYKYRPRRK K
Sbjct: 85 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKSK 116
>gi|15823192|dbj|BAB68747.1| HMG-box transcription factor [Mus spicilegus]
Length = 224
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPF++EAKRLRA H++++PDYKYRPRRK K
Sbjct: 85 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKSK 116
>gi|15823176|dbj|BAB68739.1| HMG-box transcription factor [Mus musculus]
gi|15823184|dbj|BAB68743.1| HMG-box transcription factor [Mus musculus]
Length = 224
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPF++EAKRLRA H++++PDYKYRPRRK K
Sbjct: 85 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKSK 116
>gi|185133896|ref|NP_001117651.1| SOX9 [Oncorhynchus mykiss]
gi|2780750|dbj|BAA24365.1| SOX9 [Oncorhynchus mykiss]
Length = 488
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 6/62 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS-PNQGAPAPTSASNAFP 60
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S P G S+ + F
Sbjct: 153 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEPEDGEQTHISSGDIFK 207
Query: 61 SF 62
+
Sbjct: 208 AL 209
>gi|223648434|gb|ACN10975.1| Transcription factor SOX-9 [Salmo salar]
Length = 490
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 6/62 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS-PNQGAPAPTSASNAFP 60
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S P G S+ + F
Sbjct: 153 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEPEDGEQTHISSGDIFK 207
Query: 61 SF 62
+
Sbjct: 208 AL 209
>gi|47213805|emb|CAF92578.1| unnamed protein product [Tetraodon nigroviridis]
Length = 502
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 8/82 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
+KRPFI+EA+RLR H K++PDYKY+PRR+ G+ +P ++S QG + + + + +
Sbjct: 154 DKRPFIEEAERLRKQHKKDYPDYKYQPRRRKN--GKLMPASESDGQGEGEASHSQSHYKT 211
Query: 62 FPLPPYFANHGGGSHPHPLDSL 83
L N G GS PLD L
Sbjct: 212 LHLE---HNGGAGS---PLDDL 227
>gi|67078462|ref|NP_001019952.1| transcription factor SOX-18 [Rattus norvegicus]
gi|66911635|gb|AAH97973.1| SRY (sex determining region Y)-box 18 [Rattus norvegicus]
gi|149033909|gb|EDL88692.1| SRY-box containing gene 18 [Rattus norvegicus]
Length = 377
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPF++EA+RLR H+++HP+YKYRPRRK + + + P PS
Sbjct: 124 EKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQA--------RKVRRLEPGLLLPGLVQPS 175
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMN 104
P P+ A G L +L A + + +P SP D +
Sbjct: 176 APPEPFAAASGSARSFRELPTLGAEFDGLGLPTPERSPLDGLE 218
>gi|312371761|gb|EFR19867.1| hypothetical protein AND_21691 [Anopheles darlingi]
Length = 720
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 29/31 (93%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
M++RP+++EA+RLR +HM EHP+YKYRPRR+
Sbjct: 49 MDRRPYVEEAERLRVIHMTEHPNYKYRPRRR 79
>gi|1405749|emb|CAA67015.1| SOX15 protein [Mus musculus]
Length = 140
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPF++EAKRLRA H++++PDYKYRPRRK K
Sbjct: 1 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKSK 32
>gi|397788083|gb|AFO66690.1| SoxB [Leucosolenia complicata]
Length = 305
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 29/34 (85%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP 35
+K PFI+EA+RLRA H +HPDYKYRPRRKPK P
Sbjct: 53 DKAPFIEEARRLRAQHQADHPDYKYRPRRKPKPP 86
>gi|270268863|gb|ACZ65967.1| Sox8b [Misgurnus anguillicaudatus]
Length = 414
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP-RRKPKTPGQSIPNNKS 44
EKRPF++EA+RLR H K+HPDYKY+P RRK P QS P+ K+
Sbjct: 136 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSMKPDQSEPDEKN 179
>gi|444731631|gb|ELW71983.1| Transcription factor SOX-17 [Tupaia chinensis]
Length = 225
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK--PKTPGQSIPNNKSPNQGAPA 51
EKRPF++EA+RLR HM++HP+YKYRPRR+ P P +++P + G PA
Sbjct: 112 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQPSPPPEALPCRDGGDPGQPA 163
>gi|241811172|ref|XP_002416447.1| HMG-box transcription factor, putative [Ixodes scapularis]
gi|215510911|gb|EEC20364.1| HMG-box transcription factor, putative [Ixodes scapularis]
Length = 393
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 32/34 (94%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+E++P+I+EA+RLR +HM+E+PDYKYRPR+K KT
Sbjct: 92 LERKPYIEEAERLRLLHMQEYPDYKYRPRKKAKT 125
>gi|340713694|ref|XP_003395374.1| PREDICTED: hypothetical protein LOC100647727 [Bombus terrestris]
Length = 609
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 29/34 (85%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP 35
E+RPFI+EA+RLR +HM E+PDYKYRPR+K P
Sbjct: 89 ERRPFIEEAERLRQLHMVEYPDYKYRPRKKASKP 122
>gi|66571104|gb|AAY51517.1| IP09065p [Drosophila melanogaster]
Length = 784
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI-PNNKSPNQGAPAP-TSASNAF 59
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ +++ P K ++ +P P T S +
Sbjct: 260 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSN 319
Query: 60 PSFPLPP 66
PP
Sbjct: 320 LKLATPP 326
>gi|110735124|gb|ABG89132.1| sox9a [Kryptolebias marmoratus]
Length = 197
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNNKSPNQGAP 50
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS P + P +P
Sbjct: 68 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSEPEDGEPTHISP 118
>gi|157255|gb|AAA28473.1| Sry-related sequence, partial [Drosophila melanogaster]
Length = 54
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+PDYKYRP
Sbjct: 28 EKRPFIDEAKRLRALHMKEYPDYKYRP 54
>gi|356690350|gb|AET36674.1| sox [Paramisgurnus dabryanus]
gi|356690352|gb|AET36675.1| sox [Paramisgurnus dabryanus]
Length = 68
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+PDYKYRP
Sbjct: 42 EKRPFIDEAKRLRALHMKEYPDYKYRP 68
>gi|444727892|gb|ELW68370.1| Transcription factor SOX-9 [Tupaia chinensis]
Length = 509
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ +GA T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEGATEQTHIS 199
>gi|389567446|gb|AFK84447.1| SRY-box containing protein 3a, partial [Plestiodon chinensis]
Length = 72
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/28 (89%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMK++PDYKYRPR
Sbjct: 45 EKRPFIDEAKRLRALHMKDYPDYKYRPR 72
>gi|260801461|ref|XP_002595614.1| hypothetical protein BRAFLDRAFT_200721 [Branchiostoma floridae]
gi|229280861|gb|EEN51626.1| hypothetical protein BRAFLDRAFT_200721 [Branchiostoma floridae]
Length = 233
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 20/84 (23%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGA-------PAPTS 54
EKRPFI+EA+RLR H K+HPDYKY+PRR+ N+K NQG+ +P S
Sbjct: 67 EKRPFIEEAERLRVQHKKDHPDYKYQPRRR--------KNSKQGNQGSGDEAGSEASPIS 118
Query: 55 ASNAFPSFPLPPYFANHGGGSHPH 78
A+ F + A GS PH
Sbjct: 119 ANTIFKALQ-----AESPTGSEPH 137
>gi|350417431|ref|XP_003491419.1| PREDICTED: hypothetical protein LOC100743868 [Bombus impatiens]
Length = 567
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 29/34 (85%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP 35
E+RPFI+EA+RLR +HM E+PDYKYRPR+K P
Sbjct: 74 ERRPFIEEAERLRQLHMVEYPDYKYRPRKKASKP 107
>gi|2137384|pir||JC4238 HMG-box transcription factor - mouse
Length = 378
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK-------TPGQSIPNNKSPNQGAPAPTS 54
EKRPF++EA+RLR H+++HP+YKYRPRRK + PG +P + A +
Sbjct: 124 EKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQERKVRRLEPGLLVPGLVQSSAPAEVFAA 183
Query: 55 ASNAFPSF-PLPPYFANHGGGSHPHPLDSLSAAY 87
AS + SF LP A G + P P L +
Sbjct: 184 ASGSARSFRELPTLGAEFDGLALPTPERRLLTGW 217
>gi|14290109|gb|AAK59255.1| HMG box transcription factor Sox9a2 [Monopterus albus]
Length = 488
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNNKS 44
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS P + S
Sbjct: 152 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSEPEDGS 195
>gi|345492223|ref|XP_001603867.2| PREDICTED: hypothetical protein LOC100120206 [Nasonia vitripennis]
Length = 744
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 10/71 (14%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAP-APTSASNAFP 60
++RPF++EA+RLR +HM+EHP+YKYRPRR+ ++P GAP +P SASNA
Sbjct: 218 DRRPFVEEAERLRVIHMQEHPNYKYRPRRRKHA-------KRAP--GAPSSPPSASNAPG 268
Query: 61 SFPLPPYFANH 71
+ P P A H
Sbjct: 269 NRPSPAGAAIH 279
>gi|51234103|gb|AAT97970.1| Sox19 protein [Paramisgurnus dabryanus]
Length = 69
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+PDYKYRP
Sbjct: 43 EKRPFIDEAKRLRALHMKEYPDYKYRP 69
>gi|146351855|gb|ABQ23866.1| sox14 [Glandirana tientaiensis]
Length = 68
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRP 28
+EKRP+IDEAKRLRA HMKEHPDYKYRP
Sbjct: 41 VEKRPYIDEAKRLRAQHMKEHPDYKYRP 68
>gi|146351845|gb|ABQ23861.1| sox3b [Glandirana tientaiensis]
Length = 72
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+PDYKYRP
Sbjct: 42 EKRPFIDEAKRLRAVHMKEYPDYKYRP 68
>gi|109086413|ref|XP_001083536.1| PREDICTED: transcription factor SOX-17 isoform 2 [Macaca mulatta]
Length = 414
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P A P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGG 172
Query: 56 SNAFPSFPL----------PPYFANHGGGSHPHPLDSLSAAYPPMN---MPHYFGSPFDA 102
A L PP H GG H D S PP++ +P SP D
Sbjct: 173 RVAMDGLGLPFPEQGFPAGPPLLPPHMGG---HYRDCQSLGAPPLDGYQLPTPDTSPLDG 229
Query: 103 MN 104
++
Sbjct: 230 VD 231
>gi|356690356|gb|AET36677.1| sox [Paramisgurnus dabryanus]
Length = 68
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP+IDEAKRLRA HMKEHPDYKYRP
Sbjct: 42 EKRPYIDEAKRLRAQHMKEHPDYKYRP 68
>gi|193735434|gb|AAP84605.3| transcription factor SOX9 [Odontesthes bonariensis]
Length = 479
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNN 42
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS P +
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSEPED 190
>gi|402878253|ref|XP_003902811.1| PREDICTED: transcription factor SOX-17 [Papio anubis]
Length = 412
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P A P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGG 172
Query: 56 SNAFPSFPL----------PPYFANHGGGSHPHPLDSLSAAYPPMN---MPHYFGSPFDA 102
A L PP H GG H D S PP++ +P SP D
Sbjct: 173 RVAMDGLGLPFPEQGFPAGPPLLPPHMGG---HYRDCQSLGAPPLDGYQLPTPDTSPLDG 229
Query: 103 MN 104
++
Sbjct: 230 VD 231
>gi|157311663|ref|NP_001098556.1| Sry-box containing protein 9b [Oryzias latipes]
gi|68445615|dbj|BAE02836.1| HMG box transcription factor Sox9a2 [Oryzias latipes]
Length = 476
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNNKSPNQGAP 50
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS + P +P
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSEAEDSEPTHISP 198
>gi|322790295|gb|EFZ15294.1| hypothetical protein SINV_15774 [Solenopsis invicta]
Length = 580
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 33/38 (86%), Gaps = 3/38 (7%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK---PKTPG 36
++RP+++EA+RLR +HM+EHP+YKYRPRR+ +TPG
Sbjct: 74 DRRPYVEEAERLRVIHMQEHPNYKYRPRRRKHAKRTPG 111
>gi|421991544|gb|AFX73410.1| transcription factor Sox9, partial [Salvelinus alpinus]
Length = 256
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 6/62 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS-PNQGAPAPTSASNAFP 60
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S P G S+ + F
Sbjct: 137 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEPEDGEQTHISSGDIFK 191
Query: 61 SF 62
+
Sbjct: 192 AL 193
>gi|238836394|gb|ACR61405.1| Sox3a [Pelophylax plancyi]
Length = 68
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+PDYKYRP
Sbjct: 42 EKRPFIDEAKRLRAVHMKEYPDYKYRP 68
>gi|348525318|ref|XP_003450169.1| PREDICTED: transcription factor Sox-9-like isoform 3 [Oreochromis
niloticus]
Length = 472
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNNKSPNQGAP 50
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS P + +P
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSEPEDNDQTHISP 198
>gi|348525314|ref|XP_003450167.1| PREDICTED: transcription factor Sox-9-like isoform 1 [Oreochromis
niloticus]
Length = 484
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNN 42
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS P +
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSEPED 190
>gi|397505483|ref|XP_003823290.1| PREDICTED: transcription factor SOX-17 [Pan paniscus]
Length = 428
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P A P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGG 172
Query: 56 SNAFPSFPL----------PPYFANHGGGSHPHPLDSLSAAYPPMN---MPHYFGSPFDA 102
A L PP H GG H D S PP++ +P SP D
Sbjct: 173 RVAMDGLGLQFPEQGFPAGPPLLPPHMGG---HYRDCQSLGAPPLDGYPLPTPDTSPLDG 229
Query: 103 MN 104
++
Sbjct: 230 VD 231
>gi|114620158|ref|XP_001153136.1| PREDICTED: transcription factor SOX-17 [Pan troglodytes]
Length = 416
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P A P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGG 172
Query: 56 SNAFPSFPL----------PPYFANHGGGSHPHPLDSLSAAYPPMN---MPHYFGSPFDA 102
A L PP H GG H D S PP++ +P SP D
Sbjct: 173 RVAMDGLGLQFPEQGFPAGPPLLPPHMGG---HYRDCQSLGAPPLDGYPLPTPDTSPLDG 229
Query: 103 MN 104
++
Sbjct: 230 VD 231
>gi|238836402|gb|ACR61409.1| Sox14 [Pelophylax plancyi]
Length = 68
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP+IDEAKRLRA HMKEHPDYKYRP
Sbjct: 42 EKRPYIDEAKRLRAQHMKEHPDYKYRP 68
>gi|219567002|dbj|BAH05019.1| HMG box transcription factor Sox9a2 [Oryzias luzonensis]
Length = 476
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNNKSPNQGAP 50
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS + P +P
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSEAEDSEPTHISP 198
>gi|348518451|ref|XP_003446745.1| PREDICTED: hypothetical protein LOC100694062 [Oreochromis
niloticus]
Length = 394
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 7/63 (11%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI----PNNKSPNQGAPAPTSASN 57
EK PFI EA+RLR HM ++PDYKYRP++KP+T G+S N +P+ PA A+
Sbjct: 95 EKVPFIREAERLRLQHMADYPDYKYRPKKKPRTEGRSAGQYQERNDTPSYKTPA---AAK 151
Query: 58 AFP 60
FP
Sbjct: 152 KFP 154
>gi|62082628|gb|AAX62151.1| Sry-box containing protein 9b [Oryzias latipes]
Length = 476
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNNKSPNQGAP 50
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS + P +P
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSEAEDSEPTHISP 198
>gi|58465464|gb|AAW78521.1| transcription factor Sox-9 [Acipenser sturio]
Length = 432
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + P T S
Sbjct: 137 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQNEAEDGPEQTHIS 186
>gi|449498039|ref|XP_004176906.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-11
[Taeniopygia guttata]
Length = 403
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN-NKSPNQGAP 50
EK PFI EA+RLR HM ++PDYKYRPR+KPK + PN ++SP + AP
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKMDPSAKPNASQSPEKNAP 143
>gi|11967991|ref|NP_071899.1| transcription factor SOX-17 [Homo sapiens]
gi|23822216|sp|Q9H6I2.1|SOX17_HUMAN RecName: Full=Transcription factor SOX-17
gi|10438564|dbj|BAB15277.1| unnamed protein product [Homo sapiens]
gi|18181919|dbj|BAB83867.1| SRY-related HMG-box transcription factor SOX17 [Homo sapiens]
gi|119607154|gb|EAW86748.1| SRY (sex determining region Y)-box 17 [Homo sapiens]
gi|147898035|gb|AAI40308.1| SRY (sex determining region Y)-box 17 [synthetic construct]
gi|208967494|dbj|BAG73761.1| SRY (sex determining region Y)-box 17 [synthetic construct]
Length = 414
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P A P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGG 172
Query: 56 SNAFPSFPL----------PPYFANHGGGSHPHPLDSLSAAYPPMN---MPHYFGSPFDA 102
A L PP H GG H D S PP++ +P SP D
Sbjct: 173 RVAMDGLGLQFPEQGFPAGPPLLPPHMGG---HYRDCQSLGAPPLDGYPLPTPDTSPLDG 229
Query: 103 MN 104
++
Sbjct: 230 VD 231
>gi|163637126|gb|ABY27377.1| Sox [Andrias davidianus]
gi|172085039|gb|ACB71408.1| Sox14 [Andrias davidianus]
Length = 72
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP+IDEAKRLRA HMKEHPDYKYRP
Sbjct: 46 EKRPYIDEAKRLRAQHMKEHPDYKYRP 72
>gi|322803549|dbj|BAJ76658.1| transcription factor SoxE [Branchiostoma belcheri]
Length = 368
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 21/84 (25%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGA-------PAPTS 54
EKRPFI+EA+RLR H K+HPDYKY+PRR+ N NQG+ P+P S
Sbjct: 35 EKRPFIEEAERLRVQHKKDHPDYKYQPRRR---------KNSKANQGSGDEAGSEPSPIS 85
Query: 55 ASNAFPSFPLPPYFANHGGGSHPH 78
A+ F + A GS PH
Sbjct: 86 ANTIFKAL-----QAESPTGSEPH 104
>gi|391333634|ref|XP_003741217.1| PREDICTED: uncharacterized protein LOC100903215 [Metaseiulus
occidentalis]
Length = 307
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFI+EA RLR +H KE+PDYKY+PRRKPK
Sbjct: 93 EKRPFIEEADRLRNLHKKEYPDYKYQPRRKPK 124
>gi|307576187|gb|ADN52691.1| SRY-box containing protein 14a, partial [Andrias davidianus]
Length = 70
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP+IDEAKRLRA HMKEHPDYKYRP
Sbjct: 44 EKRPYIDEAKRLRAQHMKEHPDYKYRP 70
>gi|2982742|dbj|BAA25297.1| SOX11 [Gallus gallus]
Length = 396
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN-NKSPNQGAP 50
EK PFI EA+RLR HM ++PDYKYRPR+KPK + PN +SP + AP
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKMDPSAKPNAGQSPEKNAP 143
>gi|297682875|ref|XP_002819131.1| PREDICTED: transcription factor SOX-17 [Pongo abelii]
Length = 416
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P A P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGG 172
Query: 56 SNAFPSFPL----------PPYFANHGGGSHPHPLDSLSAAYPPMN---MPHYFGSPFDA 102
A L PP H GG H D S PP++ +P SP D
Sbjct: 173 RVAMDGLGLQFPEQGFPAGPPLLPPHMGG---HYRDCQSLGAPPLDGYPLPTPDTSPLDG 229
Query: 103 MN 104
++
Sbjct: 230 VD 231
>gi|218669747|gb|ACL00350.1| SRY-like HMG box protein 3c [Odorrana livida]
Length = 69
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/28 (89%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMKE+P+YKYRPR
Sbjct: 42 EKRPFIDEAKRLRAVHMKEYPNYKYRPR 69
>gi|297299404|ref|XP_002805384.1| PREDICTED: transcription factor SOX-17 [Macaca mulatta]
Length = 357
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P A P
Sbjct: 56 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGG 115
Query: 56 SNAFPSFPL----------PPYFANHGGGSHPHPLDSLSAAYPPMN---MPHYFGSPFDA 102
A L PP H GG H D S PP++ +P SP D
Sbjct: 116 RVAMDGLGLPFPEQGFPAGPPLLPPHMGG---HYRDCQSLGAPPLDGYQLPTPDTSPLDG 172
Query: 103 MN 104
++
Sbjct: 173 VD 174
>gi|380025154|ref|XP_003696344.1| PREDICTED: uncharacterized protein LOC100871310 [Apis florea]
Length = 560
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI 39
E+RPFI+EA+RLR +HM E+PDYKYRPR+K I
Sbjct: 89 ERRPFIEEAERLRQLHMVEYPDYKYRPRKKTSKSATCI 126
>gi|348525316|ref|XP_003450168.1| PREDICTED: transcription factor Sox-9-like isoform 2 [Oreochromis
niloticus]
Length = 450
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNN 42
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS P +
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSEPED 190
>gi|157110157|ref|XP_001650975.1| hypothetical protein AaeL_AAEL000771 [Aedes aegypti]
gi|108883926|gb|EAT48151.1| AAEL000771-PA [Aedes aegypti]
Length = 740
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
++RP+++EA+RLR +HM EHP+YKYRPRR+ T +S
Sbjct: 187 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKHTKARS 223
>gi|89242271|gb|ABD64561.1| sox2a [Microhyla ornata]
Length = 71
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRP+IDEAKRLRA HMKEHP+YKYRPR
Sbjct: 44 EKRPYIDEAKRLRAQHMKEHPNYKYRPR 71
>gi|387915134|gb|AFK11176.1| transcription factor Sox-17-alpha [Callorhinchus milii]
Length = 414
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM+EHP+YKYRPRR+ +
Sbjct: 116 EKRPFVEEAERLRIQHMQEHPNYKYRPRRRKQI 148
>gi|307576189|gb|ADN52692.1| SRY-box containing protein 14b, partial [Andrias davidianus]
Length = 70
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP+IDEAKRLRA HMKEHPDYKYRP
Sbjct: 44 EKRPYIDEAKRLRAQHMKEHPDYKYRP 70
>gi|159144449|gb|ABW90110.1| Sox14 [Trachemys scripta elegans]
gi|160694412|gb|ABX46633.1| Sox14 [Tragopan caboti]
gi|363412409|gb|AEW22993.1| transcription factor SOX14 [Gloydius brevicaudus]
Length = 71
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP+IDEAKRLRA HMKEHPDYKYRP
Sbjct: 45 EKRPYIDEAKRLRAQHMKEHPDYKYRP 71
>gi|61808324|gb|AAX56088.1| HMG-box transcription factor Sox9b [Cyprinus carpio]
Length = 428
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF 59
EKRPF++EA+RLR H K+HPDYKYRPRR+ +S+ N +S ++ + NA
Sbjct: 143 EKRPFVEEAERLRVQHKKDHPDYKYRPRRR-----KSVKNGQSESEDGEQTHISPNAI 195
>gi|357607487|gb|EHJ65527.1| hypothetical protein KGM_19695 [Danaus plexippus]
Length = 222
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPFIDEAKRLR HM ++PDYKYRPRRK
Sbjct: 70 EKRPFIDEAKRLRLKHMHDYPDYKYRPRRK 99
>gi|363412413|gb|AEW22995.1| transcription factor SOX14 [Gekko japonicus]
Length = 71
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP+IDEAKRLRA HMKEHPDYKYRP
Sbjct: 45 EKRPYIDEAKRLRAQHMKEHPDYKYRP 71
>gi|345495794|ref|XP_003427576.1| PREDICTED: hypothetical protein LOC100123293 [Nasonia vitripennis]
Length = 450
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
E+RPFI+EA+RLR +HM E+PDYKYRPR+K P
Sbjct: 89 ERRPFIEEAERLRQLHMMEYPDYKYRPRKKTSKPA 123
>gi|363412391|gb|AEW22985.1| transcription factor SOX3 [Rhacophorus dennysi]
gi|363412394|gb|AEW22986.1| transcription factor SOX3 [Fejervarya limnocharis]
Length = 71
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+PDYKYRP
Sbjct: 45 EKRPFIDEAKRLRAVHMKEYPDYKYRP 71
>gi|110835872|emb|CAH10150.1| transcription factor SOX-9 [Bufo bufo]
Length = 481
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF 59
EKRPF++EA+RLR H K+HPDYKY+PRR+ + Q +PT+ A
Sbjct: 150 EKRPFVEEAERLRIQHKKDHPDYKYQPRRRKSVKNGQVEQEDGSEQTHISPTTIFKAL 207
>gi|729117|sp|P40667.1|CH03_CHICK RecName: Full=SRY-related protein CH3
gi|211512|gb|AAA48681.1| Sry-related sequence [Gallus gallus]
Length = 54
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+PDYKYRP
Sbjct: 28 EKRPFIDEAKRLRAVHMKEYPDYKYRP 54
>gi|328791162|ref|XP_001122631.2| PREDICTED: hypothetical protein LOC726914 [Apis mellifera]
Length = 558
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI 39
E+RPFI+EA+RLR +HM E+PDYKYRPR+K I
Sbjct: 74 ERRPFIEEAERLRQLHMVEYPDYKYRPRKKTSKSATCI 111
>gi|259013205|ref|NP_001158352.1| SRY-box containing gene 18 [Oryzias latipes]
gi|227336654|gb|ACP21274.1| SRY-box containing gene 18 [Oryzias latipes]
Length = 529
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 30/34 (88%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
++KRPF++EA+RLR H+++HP+YKYRPRRK T
Sbjct: 145 LDKRPFVEEAERLRVQHLQDHPNYKYRPRRKKIT 178
>gi|1168423|sp|P40642.2|AMA2_ALLMI RecName: Full=SRY-related protein AMA2
gi|210914|gb|AAA48531.1| Sry-related sequence, partial [Alligator mississippiensis]
Length = 54
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKE+P+YKYRP
Sbjct: 28 EKRPFIDEAKRLRAMHMKEYPNYKYRP 54
>gi|213958583|gb|ACJ54688.1| SRY-like HMG box protein 3a [Odorrana schmackeri]
Length = 71
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/28 (89%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMKE+P+YKYRPR
Sbjct: 44 EKRPFIDEAKRLRAVHMKEYPNYKYRPR 71
>gi|729122|sp|P40670.1|CH31_CHICK RecName: Full=SRY-related protein CH31
gi|211508|gb|AAA48679.1| Sry-related sequence, partial [Gallus gallus]
Length = 54
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKE+P+YKYRP
Sbjct: 28 EKRPFIDEAKRLRAMHMKEYPNYKYRP 54
>gi|61216330|sp|Q864Q5.1|SRY_KOGSI RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|30016721|dbj|BAC75648.1| testis determining factor [Kogia sima]
Length = 216
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS 44
EK+PF +EA+RLRAMH ++P YKYRPRRKPK P + +P + S
Sbjct: 99 EKQPFFEEAQRLRAMHRDKYPGYKYRPRRKPKRPQKLLPADSS 141
>gi|157824128|ref|NP_001101372.1| transcription factor SOX-17 [Rattus norvegicus]
gi|149060984|gb|EDM11594.1| SRY-box containing gene 17 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149060985|gb|EDM11595.1| SRY-box containing gene 17 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 423
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P GA P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRMKRVEGGFLHALAEPQAGALGPEGG 172
Query: 56 SNAFPSFPLP 65
A LP
Sbjct: 173 RVAMDGLGLP 182
>gi|198246575|gb|ACH82238.1| sox3b [Bombina maxima]
Length = 71
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/28 (89%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMKE+P+YKYRPR
Sbjct: 44 EKRPFIDEAKRLRAVHMKEYPNYKYRPR 71
>gi|83588749|gb|ABB02374.2| Sox8 [Salmo salar]
Length = 356
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ PGQS
Sbjct: 145 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKPGQS 182
>gi|45383978|ref|NP_990518.1| transcription factor SOX-11 [Gallus gallus]
gi|1351141|sp|P48435.1|SOX11_CHICK RecName: Full=Transcription factor SOX-11; Short=cSox11
gi|595499|gb|AAB09664.1| Sox11 transcription factor [Gallus gallus]
Length = 396
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN-NKSPNQGAP 50
EK PFI EA+RLR HM ++PDYKYRPR+KPK + PN +SP + AP
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKMDPSAKPNAGQSPEKNAP 143
>gi|186461242|gb|ACC78297.1| sex-determining protein [Equus caballus]
Length = 235
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
EK PF +EA+RLRAMH +++PDYKYRPRRK K P +S
Sbjct: 99 EKLPFFEEAQRLRAMHQEKYPDYKYRPRRKAKMPQKS 135
>gi|160221276|gb|ABX11265.1| sex-determining region Y protein [Equus burchellii]
Length = 235
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
EK PF +EA+RLRAMH +++PDYKYRPRRK K P +S
Sbjct: 99 EKLPFFEEAQRLRAMHQEKYPDYKYRPRRKAKMPQKS 135
>gi|134122706|dbj|BAF49650.1| testis determining factor [Kogia breviceps]
Length = 216
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS 44
EK+PF +EA+RLRAMH ++P YKYRPRRKPK P + +P + S
Sbjct: 99 EKQPFFEEAQRLRAMHRDKYPGYKYRPRRKPKRPQKLLPADSS 141
>gi|160221278|gb|ABX11266.1| sex-determining region Y protein [Equus grevyi]
Length = 235
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
EK PF +EA+RLRAMH +++PDYKYRPRRK K P +S
Sbjct: 99 EKLPFFEEAQRLRAMHQEKYPDYKYRPRRKAKMPQKS 135
>gi|345433360|dbj|BAK69337.1| SoxE protein [Balanoglossus simodensis]
Length = 179
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP-RRKPKTPGQSIPNNKSPNQGAPAPTSASNAFP 60
EK+PF+DEA+RLR H K+HPDYKY+P RRK GQ +++ + +P P +
Sbjct: 35 EKKPFVDEAERLRLQHKKDHPDYKYQPRRRKAMKNGQQNSQDETGSSSSPVPINFCKVLQ 94
Query: 61 SFPLPPYFANHGGGS 75
P N+ GGS
Sbjct: 95 RDRPPGKGDNNTGGS 109
>gi|160221274|gb|ABX11264.1| sex-determining region Y protein [Equus asinus]
Length = 235
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
EK PF +EA+RLRAMH +++PDYKYRPRRK K P +S
Sbjct: 99 EKLPFFEEAQRLRAMHQEKYPDYKYRPRRKAKMPQKS 135
>gi|156402746|ref|XP_001639751.1| predicted protein [Nematostella vectensis]
gi|74315421|gb|ABA02361.1| sox family protein 2 [Nematostella vectensis]
gi|156226881|gb|EDO47688.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 31/33 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EK+P+++EAKRLR +H K+HPDYKY+P+RKPKT
Sbjct: 53 EKQPYVEEAKRLRELHKKDHPDYKYQPKRKPKT 85
>gi|185133873|ref|NP_001118018.1| SoxP1 [Oncorhynchus mykiss]
gi|1199770|dbj|BAA11868.1| SoxP1 [Oncorhynchus mykiss]
Length = 467
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ PGQS
Sbjct: 143 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKPGQS 180
>gi|170052995|ref|XP_001862473.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873695|gb|EDS37078.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 649
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
++RP+++EA+RLR +HM EHP+YKYRPRR+ T +S
Sbjct: 86 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKHTKARS 122
>gi|125662143|gb|ABN50066.1| SRY-box containing 9 [Capra hircus]
Length = 82
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + AP T S
Sbjct: 4 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEAPEQTHIS 53
>gi|165881948|gb|ABY71240.1| Sox9 [Leucoraja erinacea]
Length = 338
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPT 53
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N + N+ T
Sbjct: 73 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQGENEEGAEQT 119
>gi|50512586|gb|AAT77677.1| sox9 [Epinephelus akaara]
Length = 479
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNN 42
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQ+ P +
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQNDPED 190
>gi|61216332|sp|Q864Q6.1|SRY_PHYCA RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|30016719|dbj|BAC75647.1| testis determining factor [Physeter catodon]
Length = 216
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS 44
EK+PF +EA+RLRAMH ++P YKY PRRKPK P +S+P + S
Sbjct: 99 EKQPFFEEAQRLRAMHRDKYPGYKYHPRRKPKRPQESLPADSS 141
>gi|270268861|gb|ACZ65966.1| Sox8a [Misgurnus anguillicaudatus]
Length = 429
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ PGQS
Sbjct: 133 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSIKPGQS 170
>gi|251736949|gb|ACT10337.1| sox9 [Epinephelus coioides]
gi|269853663|gb|ACZ51153.1| Sox9 [Epinephelus coioides]
Length = 479
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNN 42
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQ+ P +
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQNDPED 190
>gi|18859409|ref|NP_571718.1| transcription factor SOX-9 [Danio rerio]
gi|9964081|gb|AAG09814.1|AF277096_1 HMG box transcription factor Sox9a [Danio rerio]
gi|24429611|gb|AAM13695.1| transcription factor sox9a [Danio rerio]
gi|24429613|gb|AAM13696.1| transcription factor sox9a [Danio rerio]
Length = 462
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
+EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S ++ T S
Sbjct: 151 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSESEDGSEQTHIS 201
>gi|8926256|gb|AAF81765.1|AF271787_1 HMG box transcription factor AmphiSox1/2/3 [Branchiostoma
floridae]
Length = 245
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 31/33 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EK+PF++E+KRLRA HM+++PDYKYRPRRK KT
Sbjct: 67 EKKPFVEESKRLRAEHMEKYPDYKYRPRRKLKT 99
>gi|356690358|gb|AET36678.1| sox [Paramisgurnus dabryanus]
Length = 68
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP+IDEAKRLRA HM+EHPDYKYRP
Sbjct: 42 EKRPYIDEAKRLRAQHMREHPDYKYRP 68
>gi|401844436|emb|CCK82668.1| Sox19 protein, partial [Hippoglossus hippoglossus]
Length = 128
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+PDYKY+P
Sbjct: 102 EKRPFIDEAKRLRAVHMKEYPDYKYKP 128
>gi|359682155|gb|AEV53629.1| SRY sex determining region Y-8 [Sparus aurata]
Length = 468
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ PGQS
Sbjct: 145 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKNVKPGQS 182
>gi|168479560|dbj|BAG11536.1| Sry-box protein 9 [Eptatretus burgeri]
Length = 498
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 35/62 (56%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPF++EA+RLR H K+HPDYKY+PRR+ G + PAP S A
Sbjct: 151 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKAGKGGPADADGIGEDSHPAPGSLYKALTG 210
Query: 62 FP 63
P
Sbjct: 211 SP 212
>gi|185135497|ref|NP_001117071.1| Sox8 [Salmo salar]
gi|83583656|gb|ABC24688.1| Sox8 [Salmo salar]
Length = 459
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ PGQS
Sbjct: 145 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKPGQS 182
>gi|363412415|gb|AEW22996.1| transcription factor SOX14 [Coturnix coturnix]
gi|363412417|gb|AEW22997.1| transcription factor SOX14 [Francolinus pintadeanus]
Length = 71
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP+IDEAKRLRA HMKEHPDYKYRP
Sbjct: 45 EKRPYIDEAKRLRAHHMKEHPDYKYRP 71
>gi|260794137|ref|XP_002592066.1| HMG box transcription factor protein [Branchiostoma floridae]
gi|229277280|gb|EEN48077.1| HMG box transcription factor protein [Branchiostoma floridae]
Length = 241
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 31/33 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EK+PF++E+KRLRA HM+++PDYKYRPRRK KT
Sbjct: 63 EKKPFVEESKRLRAEHMEKYPDYKYRPRRKLKT 95
>gi|270010459|gb|EFA06907.1| hypothetical protein TcasGA2_TC009856 [Tribolium castaneum]
Length = 566
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPT 53
++RPF++EA+RLR +HM EHP+YKYRPRR+ ++ P G P+
Sbjct: 118 DRRPFVEEAERLRVIHMTEHPNYKYRPRRRKHNKQRATSGAGGPRVGTSLPS 169
>gi|229001910|emb|CAY12635.1| SRY-related HMG box C protein [Platynereis dumerilii]
Length = 250
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 35/40 (87%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIP 40
++++PFI+EA+RLR +HM+E+PDYKYRPR+K K+ ++ P
Sbjct: 94 VDRQPFIEEAERLRLLHMQEYPDYKYRPRKKSKSMKEATP 133
>gi|91086843|ref|XP_974207.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 745
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
++RPF++EA+RLR +HM EHP+YKYRPRR+ ++ P G P+ PS
Sbjct: 297 DRRPFVEEAERLRVIHMTEHPNYKYRPRRRKHNKQRATSGAGGPRVGTSLPS------PS 350
Query: 62 FP-LPPYFANH 71
P + P +A +
Sbjct: 351 LPNMSPRYAGY 361
>gi|242009279|ref|XP_002425417.1| transcription factor Sox-2, putative [Pediculus humanus corporis]
gi|212509234|gb|EEB12679.1| transcription factor Sox-2, putative [Pediculus humanus corporis]
Length = 455
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG-QSIPNNKSPNQ 47
E++PFIDEA++LR +HM+E+PDYKYRPR+K P ++ P+ S Q
Sbjct: 59 ERQPFIDEAEKLRILHMQEYPDYKYRPRKKVVKPASKTTPSTTSKKQ 105
>gi|729119|sp|P40669.1|CH07_CHICK RecName: Full=SRY-related protein CH7
gi|211518|gb|AAA48684.1| Sry-related sequence [Gallus gallus]
Length = 54
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAM MKE+PDYKYRP
Sbjct: 28 EKRPFIDEAKRLRAMRMKEYPDYKYRP 54
>gi|269101190|gb|ACZ25556.1| SRY-box containing protein B2 [Paramacrobiotus areolatus]
Length = 160
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EK PFIDEAK++ HM +HPDYKYRP+RK K + + + +P Q P P S S
Sbjct: 67 EKVPFIDEAKKIHTQHMLDHPDYKYRPQRKLKPLQKKMRAHSAPKQLLPGPVSYS 121
>gi|56711294|ref|NP_571362.2| SRY-box 17 [Danio rerio]
gi|56268792|gb|AAH86959.1| SRY-box containing gene 17 [Danio rerio]
Length = 413
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 22/95 (23%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFP 60
++KRPF++EA+RLR HM++HP+YKYRPRR+ + + NK P
Sbjct: 107 VDKRPFVEEAERLRVKHMQDHPNYKYRPRRRKQ-----VKRNKRLE-------------P 148
Query: 61 SFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHY 95
SFPLP + +SA Y +P Y
Sbjct: 149 SFPLPGMC----DAKMTLCTEGMSAGYSGAGLPQY 179
>gi|14290107|gb|AAK59254.1| HMG box transcription factor Sox9a1 [Monopterus albus]
Length = 482
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNN 42
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQ+ P +
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQNEPED 190
>gi|126352326|ref|NP_001075279.1| sex-determining region Y protein [Equus caballus]
gi|6175054|sp|P36389.2|SRY_HORSE RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|2443359|dbj|BAA22428.1| sex-determining protein [Equus caballus]
Length = 223
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
EK PF +EA+RLRAMH +++PDYKYRPRRK K P +S
Sbjct: 99 EKLPFFEEAQRLRAMHQEKYPDYKYRPRRKAKMPQKS 135
>gi|125811138|ref|XP_001361762.1| GA21052 [Drosophila pseudoobscura pseudoobscura]
gi|54636938|gb|EAL26341.1| GA21052 [Drosophila pseudoobscura pseudoobscura]
Length = 786
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI-PNNKSPNQGAP 50
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ +S+ P K + +P
Sbjct: 261 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRSMQPGGKDQAENSP 310
>gi|410932691|ref|XP_003979726.1| PREDICTED: transcription factor Sox-9-like, partial [Takifugu
rubripes]
Length = 454
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNN 42
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQ+ P +
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQNDPED 190
>gi|164682555|gb|ABY66377.1| SOX9 [Oreochromis aureus]
Length = 500
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 152 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEGEDGSEQTHIS 201
>gi|16945893|gb|AAL32172.1|AF329945_3 transcription factor SOX9 [Takifugu rubripes]
gi|33415940|gb|AAQ18507.1| transcription factor Sox9a [Takifugu rubripes]
Length = 484
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNN 42
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQ+ P +
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQNDPED 190
>gi|348520820|ref|XP_003447925.1| PREDICTED: transcription factor SOX-10-like [Oreochromis niloticus]
Length = 500
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 7/74 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
+KRPFI+EA+RLR H K++P+YKY+PRR+ G+ +P+N+S +QG + + + + +
Sbjct: 154 DKRPFIEEAERLRKQHKKDYPEYKYQPRRRKN--GKLMPSNESDSQGEGEASHSQSHYKT 211
Query: 62 FPLPPYFANHGGGS 75
L H GG+
Sbjct: 212 VHL-----EHNGGA 220
>gi|300296643|gb|ADJ96868.1| Sox9a [Clarias gariepinus]
Length = 460
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 28/35 (80%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EA+RLR H K+HPDYKY+PRR+ G
Sbjct: 145 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKG 179
>gi|62205311|gb|AAH93134.1| Sox9a protein [Danio rerio]
Length = 247
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
+EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S ++ T S
Sbjct: 151 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSESEDGSEQTHIS 201
>gi|226291991|gb|ACO40490.1| SRY-like HMG box containing protein 9 [Paralichthys olivaceus]
Length = 478
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNN 42
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQ+ P +
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQNEPED 190
>gi|221121856|ref|XP_002154370.1| PREDICTED: uncharacterized protein LOC100211256 [Hydra
magnipapillata]
Length = 320
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/27 (81%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EK+PFIDEAKRLRA+H++EHPDYKY+P
Sbjct: 93 EKQPFIDEAKRLRAVHIQEHPDYKYKP 119
>gi|348502014|ref|XP_003438564.1| PREDICTED: transcription factor SOX-9-like [Oreochromis niloticus]
Length = 653
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 305 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEGEDGSEQTHIS 354
>gi|729118|sp|P40668.1|CH04_CHICK RecName: Full=SRY-related protein CH4
gi|211514|gb|AAA48682.1| Sry-related sequence [Gallus gallus]
Length = 54
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFID++KRLRAMHMKE+PDYKYRP
Sbjct: 28 EKRPFIDDSKRLRAMHMKEYPDYKYRP 54
>gi|195153437|ref|XP_002017632.1| GL17288 [Drosophila persimilis]
gi|194113428|gb|EDW35471.1| GL17288 [Drosophila persimilis]
Length = 786
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI-PNNKSPNQGAP 50
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ +S+ P K + +P
Sbjct: 261 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRSMQPGGKDQAENSP 310
>gi|345802445|ref|XP_865245.2| PREDICTED: transcription factor SOX-8 isoform 3 [Canis lupus
familiaris]
Length = 462
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NAFP 60
EKRPF++EA+RLR H K+HPDYKY+PRR+ K+ ++ S + P P SA A
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-KSVKTGQGDSDSGAELGPHPGSAVYKADA 205
Query: 61 SFPLPPYFANHGGGSH 76
P + +H G +H
Sbjct: 206 GLGEPHHHGDHAGQTH 221
>gi|61216329|sp|Q864Q4.1|SRY_MESST RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|30016723|dbj|BAC75649.1| testis determining factor [Mesoplodon stejnegeri]
Length = 216
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS 44
EK+PF +EA+RLRAMH ++P YKYRPRRK K P +S+P + S
Sbjct: 99 EKQPFFEEAQRLRAMHRDKYPGYKYRPRRKAKRPQKSLPADSS 141
>gi|363412405|gb|AEW22991.1| transcription factor SOX3 [Plestiodon elegans]
Length = 71
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMK++PDYKYRP
Sbjct: 45 EKRPFIDEAKRLRALHMKDYPDYKYRP 71
>gi|161338852|emb|CAP40305.1| Xsox17-alpha1 protein [Xenopus gilli]
Length = 245
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 107 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 139
>gi|148682294|gb|EDL14241.1| SRY-box containing gene 17, isoform CRA_b [Mus musculus]
Length = 428
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P GA P
Sbjct: 122 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRMKRVEGGFLHALVEPQAGALGPEGG 181
Query: 56 SNAFPSFPLP 65
A LP
Sbjct: 182 RVAMDGLGLP 191
>gi|61216351|sp|Q8SPQ1.1|SRY_BOSJA RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|19386555|gb|AAL86547.1| sex determining factor SRY [Bos javanicus]
gi|26006016|dbj|BAC41384.1| sex determining region Y protein [Bos javanicus]
gi|84872886|gb|ABC67488.1| testis determining factor SRY [Bos javanicus]
Length = 229
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS 44
EKRPF +EA+RL A+H +HP YKYRPRR+ K P +S+P + S
Sbjct: 99 EKRPFFEEAQRLLAIHRDKHPGYKYRPRRRAKRPQKSLPADSS 141
>gi|76363934|gb|ABA41588.1| transcription factor Sox9a [Carassius auratus x Cyprinus carpio x
Carassius cuvieri]
gi|76446625|gb|ABA43067.1| HMG box transcription factor Sox9 [Carassius auratus x Cyprinus
carpio x Carassius cuvieri]
Length = 457
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S ++ T S
Sbjct: 143 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSESEDGSEQTHIS 192
>gi|307181555|gb|EFN69116.1| Transcription factor SOX-21 [Camponotus floridanus]
Length = 356
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 33/62 (53%), Gaps = 29/62 (46%)
Query: 2 EKRPFIDEAKRLR-----------------------------AMHMKEHPDYKYRPRRKP 32
EKRPFIDEAKRLR A+HMKEHPDYKYRPRRKP
Sbjct: 56 EKRPFIDEAKRLRMTTQVQSNNTTHNTEISVNLVQCYRSSFRALHMKEHPDYKYRPRRKP 115
Query: 33 KT 34
K+
Sbjct: 116 KS 117
>gi|148229969|ref|NP_001081631.1| transcription factor Sox-17-alpha-A [Xenopus laevis]
gi|2598063|emb|CAA04957.1| Xsox17-alpha [Xenopus laevis]
Length = 380
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 106 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 138
>gi|395507248|ref|XP_003757939.1| PREDICTED: transcription factor SOX-11 [Sarcophilus harrisii]
Length = 454
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN-NKSPNQGA 49
EK PFI EA+RLR HM ++PDYKYRPR+KPK S PN ++SP + A
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKMDPSSKPNASQSPEKSA 142
>gi|296226483|ref|XP_002758971.1| PREDICTED: transcription factor SOX-17 [Callithrix jacchus]
Length = 414
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P A P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGG 172
Query: 56 SNAFPSFPLP 65
A S LP
Sbjct: 173 RVAMDSLGLP 182
>gi|110735126|gb|ABG89133.1| sox9b [Kryptolebias marmoratus]
Length = 197
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNNKSPNQGAP 50
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS + P +P
Sbjct: 68 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSEAEDSEPTHISP 118
>gi|94959281|gb|ABF47517.1| transcription factor Sox9 [Odontesthes hatcheri]
Length = 258
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNN 42
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS P +
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSEPED 190
>gi|45361701|ref|NP_989425.1| transcription factor Sox-17-alpha [Xenopus (Silurana) tropicalis]
gi|82177300|sp|Q8AWH3.1|SX17A_XENTR RecName: Full=Transcription factor Sox-17-alpha; Short=Sox17alpha;
Short=tSox17alpha
gi|26224738|gb|AAN76329.1| HMG box transcription factor Sox17-alpha [Xenopus (Silurana)
tropicalis]
gi|49257720|gb|AAH74527.1| SRY (sex determining region Y)-box 17 alpha [Xenopus (Silurana)
tropicalis]
gi|50253590|gb|AAT71996.1| sox17 alpha [Xenopus (Silurana) tropicalis]
gi|89271305|emb|CAJ82986.1| SRY (sex determining region Y)-box 17 [Xenopus (Silurana)
tropicalis]
Length = 383
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 106 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 138
>gi|75570296|sp|Q90ZH9.1|S17AB_XENLA RecName: Full=Transcription factor Sox-17-alpha-B;
Short=xSox17alpha2
gi|14422418|dbj|BAB60828.1| xSox17alpha2 [Xenopus laevis]
Length = 377
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 103 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 135
>gi|317419153|emb|CBN81190.1| SOX9 [Dicentrarchus labrax]
Length = 498
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S ++ T S
Sbjct: 149 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSESEDGSEQTHIS 198
>gi|123900469|sp|Q3KQ35.1|S17AA_XENLA RecName: Full=Transcription factor Sox-17-alpha-A;
Short=Xsox17alpha; Short=xSox17alpha1
gi|76780342|gb|AAI06404.1| Xsox17-alpha protein [Xenopus laevis]
Length = 380
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 106 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 138
>gi|34223473|gb|AAQ62979.1| Sox9b transcription factor [Gasterosteus aculeatus]
Length = 477
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNN 42
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQ+ P +
Sbjct: 148 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQNDPED 189
>gi|301087307|gb|ADK60865.1| Sox9 [Andrias davidianus]
Length = 243
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + PT S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEQEEGSEPTHIS 199
>gi|195383980|ref|XP_002050702.1| GJ22304 [Drosophila virilis]
gi|194145499|gb|EDW61895.1| GJ22304 [Drosophila virilis]
Length = 802
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 35/46 (76%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQ 47
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ +++ K Q
Sbjct: 256 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRTLQPGKEQQQ 301
>gi|334349640|ref|XP_001381534.2| PREDICTED: transcription factor SOX-10, partial [Monodelphis
domestica]
Length = 608
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNA 58
+KRPFI+EA+RLR H K+HPDYKY+PRR+ K + ++P G P +A A
Sbjct: 290 DKRPFIEEAERLRMQHKKDHPDYKYQPRRR-KNGKAASGEGEAPGDGEPGGAAAIQA 345
>gi|395511154|ref|XP_003759826.1| PREDICTED: transcription factor SOX-17-like [Sarcophilus harrisii]
Length = 399
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 120 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 152
>gi|389567448|gb|AFK84448.1| SRY-box containing protein 3b, partial [Plestiodon chinensis]
Length = 72
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 28/28 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+HMK++P+YKYRPR
Sbjct: 45 EKRPFIDEAKRLRALHMKDYPNYKYRPR 72
>gi|328782560|ref|XP_001122045.2| PREDICTED: hypothetical protein LOC726298 [Apis mellifera]
Length = 784
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 29/30 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
++RP+++EA+RLR +HM+EHP+YKYRPRR+
Sbjct: 218 DRRPYVEEAERLRVIHMQEHPNYKYRPRRR 247
>gi|237512863|dbj|BAH58784.1| HMG box transcription factor Sox17 [Polypterus senegalus]
Length = 380
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 110 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 142
>gi|34223471|gb|AAQ62978.1| Sox9a transcription factor [Gasterosteus aculeatus]
Length = 464
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S ++ T S
Sbjct: 149 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSESEDGSEQTHIS 198
>gi|47215274|emb|CAF97001.1| unnamed protein product [Tetraodon nigroviridis]
Length = 495
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR 178
>gi|410895853|ref|XP_003961414.1| PREDICTED: transcription factor SOX-9-like isoform 1 [Takifugu
rubripes]
Length = 489
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR 178
>gi|14422416|dbj|BAB60827.1| xSox17alpha1 [Xenopus laevis]
Length = 354
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPF++EA+RLR HM++HP+YKYRPRR+ + N + ++ A
Sbjct: 80 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRMKRAENGFMHMAEAQESAVLGADGR 139
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAY--PPMNMPHYFG 97
L + + ++PH S+ Y P PHY G
Sbjct: 140 MCLENFSLGYHEQTYPHGQVPQSSHYREPQAVAPHYDG 177
>gi|359322652|ref|XP_003433278.2| PREDICTED: transcription factor SOX-18 [Canis lupus familiaris]
Length = 366
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF+DEA+RLR H+++HP+YKYRPRRK
Sbjct: 128 EKRPFVDEAERLRVQHLRDHPNYKYRPRRK 157
>gi|1663532|gb|AAB18615.1| HMG-box transcription factor [Mus musculus]
Length = 377
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPF++EA+RLR H+++HP+YKYRPRRK + + + P PS
Sbjct: 124 EKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQ--------ERKVRRLEPGLLLPGLVQPS 175
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMN 104
P + A G L +L A + + +P SP D +
Sbjct: 176 APPEAFAAASGSARSFRELPTLGAEFDGLGLPTPERSPLDGLE 218
>gi|383860618|ref|XP_003705786.1| PREDICTED: uncharacterized protein LOC100876699 [Megachile
rotundata]
Length = 699
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 29/30 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
++RP+++EA+RLR +HM+EHP+YKYRPRR+
Sbjct: 218 DRRPYVEEAERLRVIHMQEHPNYKYRPRRR 247
>gi|125968349|gb|ABN58783.1| Sox17 alpha [Eleutherodactylus coqui]
Length = 380
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 104 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 136
>gi|147902020|ref|NP_001083136.1| transcription factor Sox-17-alpha-B [Xenopus laevis]
gi|37805209|gb|AAH60350.1| MGC68799 protein [Xenopus laevis]
Length = 377
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 103 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 135
>gi|33415942|gb|AAQ18508.1| transcription factor Sox9b [Takifugu rubripes]
Length = 489
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR 178
>gi|6755604|ref|NP_035571.1| transcription factor SOX-17 [Mus musculus]
gi|2495259|sp|Q61473.1|SOX17_MOUSE RecName: Full=Transcription factor SOX-17
gi|1487868|dbj|BAA08444.1| HMG-box transcription factor [Mus musculus]
gi|12836220|dbj|BAB23559.1| unnamed protein product [Mus musculus]
gi|148682293|gb|EDL14240.1| SRY-box containing gene 17, isoform CRA_a [Mus musculus]
gi|151555441|gb|AAI48438.1| SRY-box containing gene 17 [synthetic construct]
gi|157169912|gb|AAI53022.1| SRY-box containing gene 17 [synthetic construct]
Length = 419
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P GA P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRMKRVEGGFLHALVEPQAGALGPEGG 172
Query: 56 SNAFPSFPLP 65
A LP
Sbjct: 173 RVAMDGLGLP 182
>gi|328721491|ref|XP_001952542.2| PREDICTED: hypothetical protein LOC100165234 [Acyrthosiphon pisum]
Length = 881
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 29/30 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
++RP+++EA+RLR +HM+EHP+YKYRPRR+
Sbjct: 236 DRRPYVEEAERLRVIHMQEHPNYKYRPRRR 265
>gi|294459806|dbj|BAJ05098.1| sex determining region Y protein [Meles anakuma]
gi|332147256|dbj|BAK20025.1| sex determining region Y protein [Meles anakuma]
gi|332147258|dbj|BAK20026.1| sex determining region Y protein [Meles anakuma]
gi|332147260|dbj|BAK20027.1| sex determining region Y protein [Meles anakuma]
gi|332147262|dbj|BAK20028.1| sex determining region Y protein [Meles anakuma]
gi|332147264|dbj|BAK20029.1| sex determining region Y protein [Meles anakuma]
gi|332147266|dbj|BAK20030.1| sex determining region Y protein [Meles anakuma]
Length = 219
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 34/41 (82%), Gaps = 2/41 (4%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK--PKTPGQSIP 40
EKRPF +EA+RL+AMH +++PDYKYRPRRK P+ +S+P
Sbjct: 99 EKRPFFEEAQRLQAMHREKYPDYKYRPRRKTVPQNSDKSLP 139
>gi|410895859|ref|XP_003961417.1| PREDICTED: transcription factor SOX-9-like isoform 4 [Takifugu
rubripes]
Length = 472
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR 178
>gi|99030439|gb|ABF61604.1| HMG box transcription factor Sox9a2 [Tachysurus fulvidraco]
Length = 457
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 156 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR 186
>gi|296200949|ref|XP_002747830.1| PREDICTED: transcription factor SOX-18 [Callithrix jacchus]
Length = 387
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 134 EKRPFVEEAERLRVQHLRDHPNYKYRPRRK 163
>gi|426239331|ref|XP_004013576.1| PREDICTED: transcription factor SOX-9 [Ovis aries]
Length = 308
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + AP T S
Sbjct: 158 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEAPEQTHIS 207
>gi|47219061|emb|CAG00200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 484
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR 178
>gi|355697958|gb|EHH28506.1| Transcription factor SOX-17 [Macaca mulatta]
Length = 414
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 54/122 (44%), Gaps = 22/122 (18%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF +EA+RLR HM++HP+YKYRPRR+ + G + P A P
Sbjct: 113 EKRPFWEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGG 172
Query: 56 SNAFPSFPL----------PPYFANHGGGSHPHPLDSLSAAYPPMN---MPHYFGSPFDA 102
A L PP H GG H D S PP++ +P SP D
Sbjct: 173 RVAMDGLGLPFPEQGFPAGPPLLPPHMGG---HYRDCQSLGAPPLDGYQLPTPDTSPLDG 229
Query: 103 MN 104
++
Sbjct: 230 VD 231
>gi|195121798|ref|XP_002005405.1| GI20453 [Drosophila mojavensis]
gi|193910473|gb|EDW09340.1| GI20453 [Drosophila mojavensis]
Length = 825
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 33/38 (86%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI 39
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ +++
Sbjct: 254 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRTL 291
>gi|157257|gb|AAA28474.1| Sry-related sequence, partial [Drosophila melanogaster]
Length = 54
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+P+YKYRP
Sbjct: 28 EKRPFIDEAKRLRALHMKEYPNYKYRP 54
>gi|363412401|gb|AEW22989.1| transcription factor SOX3 [Plestiodon chinensis]
Length = 71
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMK++PDYKYRP
Sbjct: 45 EKRPFIDEAKRLRALHMKDYPDYKYRP 71
>gi|159024079|gb|ABW87300.1| Sox9a2 [Tachysurus fulvidraco]
Length = 457
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 156 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR 186
>gi|74188304|dbj|BAE25811.1| unnamed protein product [Mus musculus]
Length = 377
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPF++EA+RLR H+++HP+YKYRPRRK + + + P PS
Sbjct: 124 EKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQA--------RKVRRLEPGLLLPGLVQPS 175
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMN 104
P + A G L +L A + + +P SP D +
Sbjct: 176 APPEAFAAASGSARSFRELPTLGAEFDGLGLPTPERSPLDGLE 218
>gi|410895857|ref|XP_003961416.1| PREDICTED: transcription factor SOX-9-like isoform 3 [Takifugu
rubripes]
Length = 454
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR 178
>gi|410895855|ref|XP_003961415.1| PREDICTED: transcription factor SOX-9-like isoform 2 [Takifugu
rubripes]
Length = 496
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR 178
>gi|375300603|gb|AFA46806.1| Sox9 [Gadus morhua]
Length = 508
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF 59
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S ++ + NA
Sbjct: 156 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSESEDGEQTHISPNAI 208
>gi|728841|sp|P40641.1|AMA1_ALLMI RecName: Full=SRY-related protein AMA1
gi|210912|gb|AAA48530.1| Sry-related sequence, partial [Alligator mississippiensis]
Length = 54
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPF DEAKRLRAMHMKE+PDYKYRP
Sbjct: 28 EKRPFSDEAKRLRAMHMKEYPDYKYRP 54
>gi|58223366|gb|AAW69293.1| HMG box transcription factor Sox9b [Carassius auratus x Cyprinus
carpio]
Length = 416
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKYRPRR+
Sbjct: 140 EKRPFVEEAERLRVQHKKDHPDYKYRPRRR 169
>gi|86129566|ref|NP_001034415.1| transcription factor SOX-17 [Gallus gallus]
gi|68532889|dbj|BAE06069.1| HMG transcription factor SOX17 [Gallus gallus]
Length = 410
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR HM++HP+YKYRPRR+
Sbjct: 107 EKRPFVEEAERLRVQHMQDHPNYKYRPRRR 136
>gi|157247|gb|AAA28469.1| Sry-related sequence, partial [Drosophila melanogaster]
Length = 54
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+P+YKYRP
Sbjct: 28 EKRPFIDEAKRLRALHMKEYPNYKYRP 54
>gi|2581940|gb|AAB82425.1| SOX11 [Mus musculus]
Length = 395
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN-NKSPNQGAPAPTSA 55
EK PFI EA RLR HM ++PDYKYRPR+KPKT + P+ +SP++ A +A
Sbjct: 94 EKIPFIREAGRLRLKHMADYPDYKYRPRKKPKTDPAAKPSAGQSPDKSAAGAKTA 148
>gi|195430136|ref|XP_002063112.1| GK21748 [Drosophila willistoni]
gi|194159197|gb|EDW74098.1| GK21748 [Drosophila willistoni]
Length = 784
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 30/33 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++
Sbjct: 269 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQS 301
>gi|149485783|ref|XP_001506094.1| PREDICTED: transcription factor SOX-9 [Ornithorhynchus anatinus]
Length = 508
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS-PNQGAPAPTSASNAF 59
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ P GA + NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEPEDGAEQTHISPNAI 203
>gi|146351847|gb|ABQ23862.1| sox3c [Glandirana tientaiensis]
Length = 72
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP IDEAKRLRA+HMKE+PDYKYRP
Sbjct: 42 EKRPIIDEAKRLRAVHMKEYPDYKYRP 68
>gi|159024073|gb|ABW87297.1| transcription factor Sox9 [Cynoglossus semilaevis]
Length = 219
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNNKS 44
+EKRPF++EA+RLR H K+HPDYKY+PRR+ GQ+ P + S
Sbjct: 66 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQNDPEDGS 110
>gi|729116|sp|P40666.1|CH02_CHICK RecName: Full=SRY-related protein CH2
gi|211506|gb|AAA48678.1| Sry-related sequence [Gallus gallus]
Length = 54
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA HMKE+PDYKYRP
Sbjct: 28 EKRPFIDEAKRLRASHMKEYPDYKYRP 54
>gi|110611206|gb|ABG77973.1| Sox9 [Poecilia reticulata]
Length = 480
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR 178
>gi|261887561|gb|ACY05958.1| SRY-related HMG box protein 9a [Cynoglossus semilaevis]
Length = 486
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 148 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR 178
>gi|124244106|ref|NP_033262.2| transcription factor SOX-18 [Mus musculus]
gi|23831447|sp|P43680.3|SOX18_MOUSE RecName: Full=Transcription factor SOX-18
gi|12082691|gb|AAG48578.1| Sry-related HMG-box protein [Mus musculus]
gi|13879280|gb|AAH06612.1| SRY-box containing gene 18 [Mus musculus]
gi|148675492|gb|EDL07439.1| SRY-box containing gene 18 [Mus musculus]
Length = 377
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPF++EA+RLR H+++HP+YKYRPRRK + + + P PS
Sbjct: 124 EKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQA--------RKVRRLEPGLLLPGLVQPS 175
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMN 104
P + A G L +L A + + +P SP D +
Sbjct: 176 APPEAFAAASGSARSFRELPTLGAEFDGLGLPTPERSPLDGLE 218
>gi|351711185|gb|EHB14104.1| Transcription factor SOX-8 [Heterocephalus glaber]
Length = 362
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS
Sbjct: 42 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKTGQS 79
>gi|51234097|gb|AAT97967.1| Sox21a protein [Paramisgurnus dabryanus]
Length = 69
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP+IDEAKRLRA+HM+EHPDYKY+P
Sbjct: 43 EKRPYIDEAKRLRALHMREHPDYKYQP 69
>gi|243010648|gb|ACS94420.1| sox 4 protein [Pterophyllum scalare]
Length = 46
Score = 57.0 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYR 27
EKRPFIDEAKRLRA+HMKEHPDYKYR
Sbjct: 21 EKRPFIDEAKRLRALHMKEHPDYKYR 46
>gi|291235047|ref|XP_002737457.1| PREDICTED: sox11-like protein-like [Saccoglossus kowalevskii]
Length = 296
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 29/32 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EK P+++EA+RLR +HM+E+PDYKYRPR+K K
Sbjct: 106 EKHPYVEEAERLRLLHMQEYPDYKYRPRKKAK 137
>gi|32481085|gb|AAP83939.1| HMG-box transcription factor Sox21a [Cyprinus carpio]
Length = 69
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHP+YKY+P
Sbjct: 43 EKRPFIDEAKRLRAVHMKEHPNYKYQP 69
>gi|47202034|emb|CAF87551.1| unnamed protein product [Tetraodon nigroviridis]
Length = 296
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 7 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR 37
>gi|410925258|ref|XP_003976098.1| PREDICTED: transcription factor SOX-10-like isoform 2 [Takifugu
rubripes]
Length = 493
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
+KRPFI+EA+RLR H K++PDYKY+PRR+ G+ + ++S QG + + + + +
Sbjct: 154 DKRPFIEEAERLRKQHKKDYPDYKYQPRRRKN--GKLMAASESDGQGEGEASHSQSHYKT 211
Query: 62 FPLPPYFANHGGGSHPHPLDSL 83
+ ++G GS PLD L
Sbjct: 212 L----HLEHNGAGS---PLDDL 226
>gi|196128947|gb|ACG70782.1| HMG-box containing protein 9 [Trachemys scripta]
Length = 492
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEQEEGSEQTHIS 199
>gi|410925256|ref|XP_003976097.1| PREDICTED: transcription factor SOX-10-like isoform 1 [Takifugu
rubripes]
gi|33415944|gb|AAQ18509.1| transcription factor Sox10a [Takifugu rubripes]
Length = 500
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
+KRPFI+EA+RLR H K++PDYKY+PRR+ G+ + ++S QG + + + + +
Sbjct: 154 DKRPFIEEAERLRKQHKKDYPDYKYQPRRRKN--GKLMAASESDGQGEGEASHSQSHYKT 211
Query: 62 FPLPPYFANHGGGSHPHPLDSL 83
+ ++G GS PLD L
Sbjct: 212 L----HLEHNGAGS---PLDDL 226
>gi|395841844|ref|XP_003793740.1| PREDICTED: transcription factor SOX-17 [Otolemur garnettii]
Length = 413
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 145
>gi|126321372|ref|XP_001379706.1| PREDICTED: transcription factor SOX-17-like [Monodelphis domestica]
Length = 410
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 120 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 152
>gi|729115|sp|P40665.1|CH01_CHICK RecName: Full=SRY-related protein CH1
gi|211501|gb|AAA48676.1| Sry-related sequence [Gallus gallus]
Length = 54
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKR RAMHMKE+PDYKYRP
Sbjct: 28 EKRPFIDEAKRHRAMHMKEYPDYKYRP 54
>gi|449494821|ref|XP_004175324.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-17
[Taeniopygia guttata]
Length = 498
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 199 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 231
>gi|126303246|ref|XP_001372169.1| PREDICTED: transcription factor SOX-11-like [Monodelphis domestica]
Length = 453
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 30/40 (75%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN 41
EK PFI EA+RLR HM ++PDYKYRPR+KPK S PN
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKMDPSSKPN 133
>gi|114683155|ref|XP_525392.2| PREDICTED: transcription factor SOX-18 [Pan troglodytes]
Length = 346
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 92 EKRPFVEEAERLRVQHLRDHPNYKYRPRRK 121
>gi|185134049|ref|NP_001117742.1| SOX9 alpha2 [Oncorhynchus mykiss]
gi|12003242|gb|AAG43497.1|AF209872_1 SOX9 alpha2 [Oncorhynchus mykiss]
Length = 492
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP-RRKPKTPGQSIPNNKS 44
EKRPF++EA+RLR H K+HPDYKY+P RRK GQS ++ S
Sbjct: 153 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSMKNGQSESDDGS 196
>gi|4336832|gb|AAD17974.1| SOX9 [Alligator mississippiensis]
Length = 495
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEQEEGSEQTHIS 199
>gi|355709820|gb|EHH31284.1| Transcription factor SOX-8, partial [Macaca mulatta]
Length = 305
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ T GQS
Sbjct: 6 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSTKAGQS 43
>gi|62860559|gb|AAY16521.1| SRY sex determining region Y-box 9 [Anas platyrhynchos]
Length = 489
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEQEEGSEQTHIS 199
>gi|187469185|gb|AAI66978.1| Sox17 protein [Rattus norvegicus]
Length = 169
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 145
>gi|62857437|ref|NP_001016853.1| transcription factor Sox-9 [Xenopus (Silurana) tropicalis]
gi|82173405|sp|Q6F2E7.1|SOX9_XENTR RecName: Full=Transcription factor Sox-9; Short=Xt-sox9
gi|50253596|gb|AAT72000.1| sox9 [Xenopus (Silurana) tropicalis]
gi|89272748|emb|CAJ82635.1| SRY (sex determining region Y)-box 9 (campomelic dysplasia,
autosomal sex-reversal) [Xenopus (Silurana) tropicalis]
Length = 482
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 150 EKRPFVEEAERLRIQHKKDHPDYKYQPRRR-----KSVKNGQSEQEDGAEQTHIS 199
>gi|300296645|gb|ADJ96869.1| Sox9b [Clarias gariepinus]
Length = 458
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 158 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 187
>gi|90085030|dbj|BAE91256.1| unnamed protein product [Macaca fascicularis]
Length = 402
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P A P
Sbjct: 56 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGG 115
Query: 56 SNAFPSFPLP 65
A LP
Sbjct: 116 RVAMDGLGLP 125
>gi|147902848|ref|NP_001087942.1| transcription factor Sox-9-B [Xenopus laevis]
gi|82182873|sp|Q6DFF5.1|SOX9B_XENLA RecName: Full=Transcription factor Sox-9-B
gi|49904068|gb|AAH76783.1| Sox9b protein [Xenopus laevis]
gi|189339119|dbj|BAG48176.1| transcription factor Sox9b [Xenopus laevis]
gi|387860564|gb|AFK08429.1| sex determining region Y-box 9 [Xenopus laevis]
Length = 476
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEQDDSAEQTHIS 199
>gi|405964900|gb|EKC30339.1| Putative transcription factor SOX-14 [Crassostrea gigas]
Length = 339
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 30/32 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
+++PFI+EA+RLR +HM+E+PDYKYRPR+K K
Sbjct: 80 DRQPFIEEAERLRLLHMQEYPDYKYRPRKKAK 111
>gi|239977610|sp|B7ZR65.1|SOX9A_XENLA RecName: Full=Transcription factor Sox-9-A
gi|213623669|gb|AAI70058.1| Transcription factor SOX9 [Xenopus laevis]
gi|387860562|gb|AFK08428.1| sex determining region Y-box 9 [Xenopus laevis]
Length = 477
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQTEQEDGAEQTHIS 199
>gi|7707826|dbj|BAA95427.1| sox9 alpha [Glandirana rugosa]
Length = 482
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 150 EKRPFVEEAERLRIQHKKDHPDYKYQPRRR-----KSVKNGQSEQEDGSDQTHIS 199
>gi|156375336|ref|XP_001630037.1| predicted protein [Nematostella vectensis]
gi|156217050|gb|EDO37974.1| predicted protein [Nematostella vectensis]
Length = 398
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EK+PFI+EA+RLR H +EHPDYKY+PRRK
Sbjct: 109 EKKPFIEEAERLRIKHKREHPDYKYQPRRK 138
>gi|119606098|gb|EAW85692.1| SRY (sex determining region Y)-box 8, isoform CRA_b [Homo sapiens]
Length = 376
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 77 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 106
>gi|147899922|ref|NP_001084276.1| transcription factor Sox-9-A [Xenopus laevis]
gi|14581669|gb|AAK61366.1| transcription factor SOX9 [Xenopus laevis]
Length = 477
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQTEQEDGAEQTHIS 199
>gi|10440496|dbj|BAB15781.1| FLJ00094 protein [Homo sapiens]
Length = 376
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 77 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 106
>gi|338713058|ref|XP_001497479.3| PREDICTED: transcription factor SOX-8-like [Equus caballus]
Length = 467
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ Q
Sbjct: 157 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKSQG 193
>gi|301780546|ref|XP_002925690.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-17-like
[Ailuropoda melanoleuca]
Length = 401
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 112 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 144
>gi|402907187|ref|XP_003916359.1| PREDICTED: transcription factor SOX-8 [Papio anubis]
Length = 446
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ T GQS
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSTKAGQS 184
>gi|397474892|ref|XP_003808890.1| PREDICTED: transcription factor SOX-8 [Pan paniscus]
Length = 460
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 202 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 231
>gi|198424605|ref|XP_002122233.1| PREDICTED: SoxE protein [Ciona intestinalis]
Length = 903
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EK+PF+DEA+RLR H K+HPDYKY+PRR+
Sbjct: 347 EKKPFVDEAERLRIKHKKDHPDYKYQPRRR 376
>gi|355721301|gb|AES07217.1| SRY -box 17 [Mustela putorius furo]
Length = 201
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 122 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 154
>gi|62234366|ref|NP_033260.4| transcription factor SOX-11 [Mus musculus]
gi|81885896|sp|Q7M6Y2.1|SOX11_MOUSE RecName: Full=Transcription factor SOX-11
gi|37619754|tpg|DAA01568.1| TPA_exp: SRY-box containing protein [Mus musculus]
gi|38328149|gb|AAH62095.1| SRY-box containing gene 11 [Mus musculus]
gi|74138842|dbj|BAE27226.1| unnamed protein product [Mus musculus]
gi|74227100|dbj|BAE38341.1| unnamed protein product [Mus musculus]
Length = 395
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 28/33 (84%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EK PFI EA+RLR HM ++PDYKYRPR+KPKT
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKT 126
>gi|380791573|gb|AFE67662.1| transcription factor SOX-8, partial [Macaca mulatta]
Length = 415
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ T GQS
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSTKAGQS 184
>gi|50925405|gb|AAH78643.1| SRY-box containing gene 11 [Mus musculus]
Length = 393
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 28/33 (84%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EK PFI EA+RLR HM ++PDYKYRPR+KPKT
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKT 126
>gi|30024612|dbj|BAC75670.1| transcriptional factor SOX11 [Mus musculus]
gi|148705017|gb|EDL36964.1| mCG11193 [Mus musculus]
Length = 395
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 28/33 (84%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EK PFI EA+RLR HM ++PDYKYRPR+KPKT
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKT 126
>gi|157251|gb|AAA28471.1| Sry-related sequence, partial [Drosophila melanogaster]
Length = 54
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMK +PDYKYRP
Sbjct: 28 EKRPFIDEAKRLRALHMKAYPDYKYRP 54
>gi|255506305|gb|ACU12296.1| Sox9 [Crocodylus palustris]
Length = 494
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEQEEGSEQTHIS 199
>gi|16758068|ref|NP_445801.1| transcription factor SOX-11 [Rattus norvegicus]
gi|109894872|sp|P0C1G9.1|SOX11_RAT RecName: Full=Transcription factor SOX-11
gi|3650366|emb|CAA06166.1| Sox11 protein [Rattus norvegicus]
gi|149051035|gb|EDM03208.1| SRY-box containing gene 11 [Rattus norvegicus]
Length = 395
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 28/33 (84%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EK PFI EA+RLR HM ++PDYKYRPR+KPKT
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKT 126
>gi|262357110|gb|ACY56488.1| SRY-box containing protein 9 [Sebastiscus marmoratus]
Length = 279
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNN 42
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQ+ P +
Sbjct: 144 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQNDPED 185
>gi|354466611|ref|XP_003495767.1| PREDICTED: transcription factor SOX-9-like [Cricetulus griseus]
Length = 572
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 285 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 334
>gi|211516|gb|AAA48683.1| Sry-related sequence [Gallus gallus]
Length = 54
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP+IDEAKRLRA HMKE+PDYKYRP
Sbjct: 28 EKRPYIDEAKRLRAQHMKEYPDYKYRP 54
>gi|165881950|gb|ABY71241.1| Sox9 [Acipenser baerii]
Length = 405
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 73 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 102
>gi|194036735|ref|XP_001928411.1| PREDICTED: transcription factor SOX-17-like [Sus scrofa]
Length = 407
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR HM++HP+YKYRPRR+
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRR 142
>gi|327280129|ref|XP_003224806.1| PREDICTED: transcription factor SOX-8-like [Anolis carolinensis]
Length = 464
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 146 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 175
>gi|238836396|gb|ACR61406.1| Sox3b [Pelophylax plancyi]
Length = 68
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+ MKE+PDYKYRP
Sbjct: 42 EKRPFIDEAKRLRAVQMKEYPDYKYRP 68
>gi|198246577|gb|ACH82239.1| sox3c [Bombina maxima]
Length = 71
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRP+IDEAKRLRA+HMKE+ DYKYRPR
Sbjct: 44 EKRPYIDEAKRLRAVHMKEYSDYKYRPR 71
>gi|1395198|dbj|BAA13006.1| DNA-binding protein [Xenopus laevis]
Length = 382
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 28/33 (84%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EK PFI+EA+RLR HM ++PDYKYRPR+KPK
Sbjct: 92 EKIPFIEEAERLRLKHMADYPDYKYRPRKKPKV 124
>gi|38197721|gb|AAH60612.1| Sox17 protein [Mus musculus]
Length = 176
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 145
>gi|40642795|emb|CAD58841.1| SoxE protein [Ciona intestinalis]
Length = 808
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EK+PF+DEA+RLR H K+HPDYKY+PRR+
Sbjct: 252 EKKPFVDEAERLRIKHKKDHPDYKYQPRRR 281
>gi|159024077|gb|ABW87299.1| Sox9a1 [Tachysurus fulvidraco]
Length = 464
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 145 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 174
>gi|157249|gb|AAA28470.1| Sry-related sequence, partial [Drosophila melanogaster]
Length = 54
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP+IDEAKRLRA HMKE+PDYKYRP
Sbjct: 28 EKRPYIDEAKRLRAQHMKEYPDYKYRP 54
>gi|395829389|ref|XP_003787842.1| PREDICTED: transcription factor SOX-18 [Otolemur garnettii]
Length = 387
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 133 EKRPFVEEAERLRVQHLRDHPNYKYRPRRK 162
>gi|395753369|ref|XP_003779598.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-10 [Pongo
abelii]
Length = 444
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF-- 59
+KRPFI+EA+RLR H K+HPDYKY+PRR+ N K+ A P A
Sbjct: 152 DKRPFIEEAERLRMQHKKDHPDYKYQPRRR--------KNGKAAQGEAECPGGEDRARWE 203
Query: 60 -PSFPLPPYFANHGGGSHP 77
P P P Y + H HP
Sbjct: 204 PPPIPRPHYKSAHLDNRHP 222
>gi|62860563|gb|AAY16523.1| SRY sex determining region Y-box 9 [Coturnix japonica]
Length = 495
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEQEEGSEQTHIS 199
>gi|260766530|gb|ACX50287.1| SRY-box containing protein 17 [Eleutherodactylus coqui]
Length = 307
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 70 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 102
>gi|293340535|ref|XP_001081628.2| PREDICTED: transcription factor SOX-9 [Rattus norvegicus]
gi|392351708|ref|XP_003750998.1| PREDICTED: transcription factor SOX-9 [Rattus norvegicus]
gi|149054688|gb|EDM06505.1| rCG33659 [Rattus norvegicus]
Length = 507
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|426227108|ref|XP_004007668.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-10 [Ovis
aries]
Length = 576
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---TPGQSIPNNKSPNQGAPAPTSA 55
+KRPFI+EA+RLR H K+HPDYKY+PRR+ G+S P QG A A
Sbjct: 257 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGESECPGGEPEQGGAAAIQA 313
>gi|60729597|pir||JC7957 sex-determining region Y (SRY)-like HMG-box protein 17, SOX17
protein - rice field eel
gi|21360382|gb|AAM47494.1| Sox17 [Monopterus albus]
Length = 399
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EK+PF++EA+RLR HM++HP+YKYRPRR+ + + K + G P + + PS
Sbjct: 110 EKQPFVEEAERLRVQHMQDHPNYKYRPRRR-----KQVKRIKRLDSGFLVPGVSDHQAPS 164
Query: 62 FP 63
P
Sbjct: 165 MP 166
>gi|146351843|gb|ABQ23860.1| sox3a [Glandirana tientaiensis]
Length = 72
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+H KE+PDYKYRP
Sbjct: 42 EKRPFIDEAKRLRAVHTKEYPDYKYRP 68
>gi|352964078|gb|AEQ64025.1| Sox-9 [Gallus gallus]
Length = 78
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 9 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEQEEGSEQTHIS 58
>gi|354500635|ref|XP_003512404.1| PREDICTED: transcription factor SOX-18 [Cricetulus griseus]
gi|344254455|gb|EGW10559.1| Transcription factor SOX-18 [Cricetulus griseus]
Length = 377
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 124 EKRPFVEEAERLRVQHLRDHPNYKYRPRRK 153
>gi|260829333|ref|XP_002609616.1| hypothetical protein BRAFLDRAFT_125030 [Branchiostoma floridae]
gi|229294978|gb|EEN65626.1| hypothetical protein BRAFLDRAFT_125030 [Branchiostoma floridae]
Length = 668
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+K+PF++EA+R+R HM++HPDYKYRPRR+
Sbjct: 162 QKQPFVEEAERIRVQHMQDHPDYKYRPRRR 191
>gi|45383572|ref|NP_989612.1| transcription factor SOX-9 [Gallus gallus]
gi|2982740|dbj|BAA25296.1| SOX9 [Gallus gallus]
Length = 494
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEQEEGSEQTHIS 199
>gi|397465126|ref|XP_003804377.1| PREDICTED: transcription factor SOX-9-like, partial [Pan
paniscus]
Length = 198
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 6 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 55
>gi|381141861|gb|AFF57872.1| Sox10a [Epinephelus coioides]
gi|381141865|gb|AFF57874.1| Sox10a [Epinephelus coioides]
Length = 499
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
+KRPFI+EA+RLR H K++P+YKY+PRR+ G+ P N+S +QG + + + + +
Sbjct: 153 DKRPFIEEAERLRKQHKKDYPEYKYQPRRRKN--GKLAPANESDSQGEGEASHSQSHYKT 210
Query: 62 FPLPPYFANHGGGS 75
L H GG+
Sbjct: 211 LHL-----EHNGGA 219
>gi|117307493|dbj|BAF36483.1| SRY-box 9 [Trimeresurus flavoviridis]
Length = 463
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 122 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 151
>gi|431905031|gb|ELK10093.1| Sex-determining region Y protein [Pteropus alecto]
Length = 194
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 32/37 (86%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
EK+PF +EA+RLRA+H +++PDYKYRPRRK K P +S
Sbjct: 79 EKQPFFEEAQRLRALHREKYPDYKYRPRRKAKMPQKS 115
>gi|375300601|gb|AFA46805.1| Sox9 [Gadus morhua]
Length = 505
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 153 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 182
>gi|317140389|gb|ADV03670.1| SRY-box containing protein 9 [Gadus morhua]
Length = 218
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF 59
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S ++ + NA
Sbjct: 68 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSESEDGEQTHISPNAI 120
>gi|109127174|ref|XP_001118556.1| PREDICTED: transcription factor SOX-8-like [Macaca mulatta]
Length = 368
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ T GQS
Sbjct: 222 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSTKAGQS 259
>gi|84380305|gb|ABC58685.1| HMG box protein SoxE3 [Petromyzon marinus]
Length = 539
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 174 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 203
>gi|37926475|gb|AAP59791.1| Sry-related gene 8 [Trachemys scripta]
Length = 375
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS
Sbjct: 70 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKAGQS 107
>gi|165932321|ref|NP_035578.3| transcription factor SOX-9 [Mus musculus]
gi|47117886|sp|Q04887.2|SOX9_MOUSE RecName: Full=Transcription factor SOX-9
gi|16226173|gb|AAL16093.1|AF421878_1 SRY sex determining region Y-box 9 protein [Mus musculus]
gi|19353856|gb|AAH24958.1| SRY-box containing gene 9 [Mus musculus]
gi|21706431|gb|AAH34264.1| SRY-box containing gene 9 [Mus musculus]
gi|23271672|gb|AAH23953.1| SRY-box containing gene 9 [Mus musculus]
gi|23271742|gb|AAH23796.1| SRY-box containing gene 9 [Mus musculus]
gi|23272221|gb|AAH23808.1| SRY-box containing gene 9 [Mus musculus]
gi|26326173|dbj|BAC26830.1| unnamed protein product [Mus musculus]
gi|148702453|gb|EDL34400.1| SRY-box containing gene 9 [Mus musculus]
Length = 507
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|194032520|gb|ACF33142.1| SoxE1 [Acropora millepora]
Length = 408
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN 41
EK+PFI+EA+RLR H +EHPDYKY+PRRK K G P+
Sbjct: 104 EKKPFIEEAERLRLKHKREHPDYKYQPRRK-KQKGNGGPD 142
>gi|146741308|dbj|BAF62309.1| transcription factor SOX-18 [Sus scrofa]
Length = 299
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 40 EKRPFVEEAERLRVQHLRDHPNYKYRPRRK 69
>gi|126335413|ref|XP_001373727.1| PREDICTED: transcription factor SOX-8-like [Monodelphis domestica]
Length = 474
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 156 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 185
>gi|26340712|dbj|BAC34018.1| unnamed protein product [Mus musculus]
Length = 507
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|426359671|ref|XP_004047090.1| PREDICTED: transcription factor SOX-17 [Gorilla gorilla gorilla]
Length = 290
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 145
>gi|13489284|gb|AAF16898.2|AF168614_1 HMG-box transcription factor Sox17 [Danio rerio]
Length = 413
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 18/65 (27%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFP 60
++KRPF++EA+RLR HM++HP+YKYRP+R+ + + NK P
Sbjct: 107 VDKRPFVEEAERLRVKHMQDHPNYKYRPKRRKQ-----VKRNKRLE-------------P 148
Query: 61 SFPLP 65
SFPLP
Sbjct: 149 SFPLP 153
>gi|395515657|ref|XP_003762017.1| PREDICTED: transcription factor SOX-8 [Sarcophilus harrisii]
Length = 474
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 156 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 185
>gi|213626763|gb|AAI70060.1| Transcription factor SOX9 [Xenopus laevis]
Length = 477
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 179
>gi|171362742|dbj|BAG14376.1| SoxE family protein E3 [Lethenteron camtschaticum]
Length = 401
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 39 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 68
>gi|125851650|ref|XP_001337702.1| PREDICTED: transcription factor SOX-18 [Danio rerio]
Length = 431
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 29/31 (93%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
++KRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 138 LDKRPFVEEAERLRLQHLQDHPNYKYRPRRK 168
>gi|157821289|ref|NP_001100459.1| transcription factor SOX-8 [Rattus norvegicus]
gi|149052122|gb|EDM03939.1| SRY-box containing gene 8 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 463
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 144 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 173
>gi|224070252|ref|XP_002188694.1| PREDICTED: transcription factor SOX-8 [Taeniopygia guttata]
Length = 474
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS
Sbjct: 156 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKAGQS 193
>gi|80973855|gb|ABB53636.1| Sox9 [Petromyzon marinus]
Length = 436
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 73 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 102
>gi|296473628|tpg|DAA15743.1| TPA: SRY (sex determining region Y)-box 8-like [Bos taurus]
Length = 747
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 432 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 461
>gi|147902296|ref|NP_001082102.1| transcription factor Sox-18A [Xenopus laevis]
gi|75570295|sp|Q90ZH8.1|SX18A_XENLA RecName: Full=Transcription factor Sox-18A; Short=xSox18alpha;
AltName: Full=SRY (sex determining region Y)-box 18A
gi|14422420|dbj|BAB60829.1| xSox18alpha [Xenopus laevis]
gi|213623310|gb|AAI69575.1| XSox18alpha protein [Xenopus laevis]
Length = 363
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 29/31 (93%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 112 VEKRPFVEEAERLRVQHLQDHPNYKYRPRRK 142
>gi|395533083|ref|XP_003768593.1| PREDICTED: transcription factor SOX-9-like [Sarcophilus harrisii]
Length = 512
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 179
>gi|242019657|ref|XP_002430276.1| Sex-determining region Y protein, putative [Pediculus humanus
corporis]
gi|212515383|gb|EEB17538.1| Sex-determining region Y protein, putative [Pediculus humanus
corporis]
Length = 289
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK--PKTPGQSIPN-NKSPNQGAPAPTSAS 56
EK PFIDEA+RLR H K+HPDYKY+PRR+ PK+ +I N N P G PTS+S
Sbjct: 61 EKLPFIDEAERLRNAHKKQHPDYKYQPRRRKPPKSMATNIVNDNDVP--GPSVPTSSS 116
>gi|344292060|ref|XP_003417746.1| PREDICTED: transcription factor SOX-8-like [Loxodonta africana]
Length = 672
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 351 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 380
>gi|126308526|ref|XP_001370056.1| PREDICTED: transcription factor SOX-9 [Monodelphis domestica]
Length = 512
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 179
>gi|449281364|gb|EMC88444.1| Transcription factor SOX-8, partial [Columba livia]
Length = 445
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS
Sbjct: 154 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKAGQS 191
>gi|426346950|ref|XP_004041131.1| PREDICTED: transcription factor SOX-9 [Gorilla gorilla gorilla]
Length = 509
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|30583965|gb|AAP36231.1| Homo sapiens SRY (sex determining region Y)-box 9 (campomelic
dysplasia, autosomal sex-reversal) [synthetic construct]
gi|60653303|gb|AAX29346.1| SRY-box 9 [synthetic construct]
gi|60653305|gb|AAX29347.1| SRY-box 9 [synthetic construct]
Length = 510
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|395826025|ref|XP_003786220.1| PREDICTED: transcription factor SOX-9 [Otolemur garnettii]
Length = 509
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|348585439|ref|XP_003478479.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-8-like
[Cavia porcellus]
Length = 467
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 176
>gi|344236292|gb|EGV92395.1| Transcription factor SOX-10 [Cricetulus griseus]
Length = 360
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 60 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 109
>gi|195364277|gb|ACF95883.1| SOX9 [Pleurodeles waltl]
Length = 479
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 151 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 180
>gi|440892015|gb|ELR45399.1| Transcription factor Sox-7 [Bos grunniens mutus]
Length = 372
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 31/110 (28%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT--------PG----------QSIPNNK 43
+KRP++DEA+RLR HM+++P+YKYRPRRK + PG S+P +
Sbjct: 142 QKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNSLPEKR 201
Query: 44 SPNQGAPAPT------SASNAFPSFPLPPYFA---NHGGGSHPHPLDSLS 84
+GAP S +A P P +A H G HPL SL+
Sbjct: 202 GGCRGAPGEKEDRGEYSPGSALPGLRGSPEYAPTPLHCG----HPLGSLA 247
>gi|402900912|ref|XP_003913405.1| PREDICTED: transcription factor SOX-9-like [Papio anubis]
Length = 509
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|224552344|gb|ACN54527.1| SRY-box 9 [Rhinella marina]
Length = 482
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + T S
Sbjct: 150 EKRPFVEEAERLRIQHKKDHPDYKYQPRRR-----KSVKNGQAEQEDGSEQTHIS 199
>gi|297701645|ref|XP_002827816.1| PREDICTED: transcription factor SOX-9 isoform 1 [Pongo abelii]
gi|61216727|sp|Q9BG91.1|SOX9_CALJA RecName: Full=Transcription factor SOX-9
gi|12698706|gb|AAK01650.1| SOX9 [Callithrix jacchus]
Length = 509
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|269931726|gb|ACZ54382.1| SRY-box 10 protein [Monodelphis domestica]
Length = 192
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNA 58
+KRPFI+EA+RLR H K+HPDYKY+PRR+ S ++P G P +A A
Sbjct: 94 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAS-GEGEAPGDGEPGGAAAIQA 149
>gi|57113943|ref|NP_001009029.1| transcription factor SOX-9 [Pan troglodytes]
gi|38503365|sp|Q9BG89.1|SOX9_PANTR RecName: Full=Transcription factor SOX-9
gi|12698712|gb|AAK01653.1| SOX9 [Pan troglodytes]
Length = 509
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|12698702|gb|AAK01648.1| SOX9 [Hylobates sp. TIB-201]
Length = 509
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|355779693|gb|EHH64169.1| Transcription factor SOX-17, partial [Macaca fascicularis]
Length = 200
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR HM++HP+YKYRPRR+
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRR 142
>gi|332254033|ref|XP_003276135.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-9-like
[Nomascus leucogenys]
Length = 510
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|47523170|ref|NP_999008.1| transcription factor SOX-9 [Sus scrofa]
gi|3024633|sp|O18896.1|SOX9_PIG RecName: Full=Transcription factor SOX-9
gi|2554931|gb|AAB81431.1| SOX-9 protein [Sus scrofa]
Length = 509
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|4557853|ref|NP_000337.1| transcription factor SOX-9 [Homo sapiens]
gi|74136295|ref|NP_001028040.1| transcription factor SOX-9 [Macaca mulatta]
gi|1351096|sp|P48436.1|SOX9_HUMAN RecName: Full=Transcription factor SOX-9
gi|48428585|sp|P61753.1|SOX9_MACMU RecName: Full=Transcription factor SOX-9
gi|48428586|sp|P61754.1|SOX9_PONPY RecName: Full=Transcription factor SOX-9
gi|758103|emb|CAA86598.1| SOX9 [Homo sapiens]
gi|807060|gb|AAB32870.1| inactivating mutations associated with campomelic dysplasia and
autosomal XY sex reversal syndromes, partial [Homo
sapiens]
gi|12698704|gb|AAK01649.1| SOX9 [Pongo pygmaeus]
gi|12698708|gb|AAK01651.1| SOX9 [Macaca mulatta]
gi|14044055|gb|AAH07951.1| SRY (sex determining region Y)-box 9 [Homo sapiens]
gi|30582589|gb|AAP35521.1| SRY (sex determining region Y)-box 9 (campomelic dysplasia,
autosomal sex-reversal) [Homo sapiens]
gi|33991649|gb|AAH56420.1| SRY (sex determining region Y)-box 9 [Homo sapiens]
gi|60656361|gb|AAX32744.1| SRY-box [synthetic construct]
gi|119609508|gb|EAW89102.1| SRY (sex determining region Y)-box 9 (campomelic dysplasia,
autosomal sex-reversal) [Homo sapiens]
gi|168277508|dbj|BAG10732.1| transcription factor SOX-9 [synthetic construct]
gi|1092657|prf||2024340A SRY-related protein
Length = 509
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|351697978|gb|EHB00897.1| Transcription factor SOX-9 [Heterocephalus glaber]
Length = 507
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 179
>gi|254771200|gb|ACT82009.1| Sox9 [Lepidochelys olivacea]
Length = 486
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 179
>gi|33563276|ref|NP_035577.1| transcription factor SOX-8 [Mus musculus]
gi|10720403|sp|Q04886.2|SOX8_MOUSE RecName: Full=Transcription factor SOX-8
gi|7025337|gb|AAF35837.1|AF191325_1 SRY-related protein SOX 8 [Mus musculus]
gi|26328277|dbj|BAC27879.1| unnamed protein product [Mus musculus]
gi|26343663|dbj|BAC35488.1| unnamed protein product [Mus musculus]
gi|55249580|gb|AAH85619.1| SRY-box containing gene 8 [Mus musculus]
gi|148690483|gb|EDL22430.1| SRY-box containing gene 8, isoform CRA_b [Mus musculus]
Length = 464
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 144 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 173
>gi|440913434|gb|ELR62884.1| Transcription factor SOX-8, partial [Bos grunniens mutus]
Length = 328
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 13 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 42
>gi|417402083|gb|JAA47900.1| Putative transcription factor sox-9 [Desmodus rotundus]
Length = 509
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 179
>gi|410909299|ref|XP_003968128.1| PREDICTED: transcription factor Sox-17-alpha-like [Takifugu
rubripes]
gi|33415948|gb|AAQ18511.1| transcription factor Sox17 [Takifugu rubripes]
Length = 399
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 15/130 (11%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS------IPNNKSPNQGAPAPTSA 55
EK+PF++EA+RLR HM++HP+YKYRPRR+ + + + + +QG P
Sbjct: 110 EKQPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRIKRLDSGFLVHGAADHQGQPLAGEG 169
Query: 56 SNAFPSFPLPPYFANHGGGSHPHPLDSLSAA-------YPPMNMPHYFGSPFDAMNFSKL 108
S L + HG H PL A Y ++P SP DA+ +
Sbjct: 170 RVCMESLGLG--YHEHGFQIHSQPLSHYRDAQALGGPSYETYSLPTPDTSPLDAVESDSM 227
Query: 109 VQGQTSQADT 118
SQ D
Sbjct: 228 FFQPHSQEDC 237
>gi|431908826|gb|ELK12418.1| Transcription factor SOX-9 [Pteropus alecto]
Length = 499
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 179
>gi|297707610|ref|XP_002830591.1| PREDICTED: transcription factor SOX-18 isoform 1 [Pongo abelii]
Length = 384
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 130 EKRPFVEEAERLRVQHLRDHPNYKYRPRRK 159
>gi|166078065|gb|ABY81084.1| SOX9 protein [Canis lupus familiaris]
gi|166078067|gb|ABY81085.1| SOX9 protein [Vulpes vulpes]
gi|166078069|gb|ABY81086.1| SOX9 protein [Vulpes lagopus]
gi|166078071|gb|ABY81087.1| SOX9 protein [Nyctereutes procyonoides procyonoides]
Length = 513
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|26329121|dbj|BAC28299.1| unnamed protein product [Mus musculus]
Length = 464
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 144 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 173
>gi|326930889|ref|XP_003211570.1| PREDICTED: transcription factor SOX-9-like [Meleagris gallopavo]
Length = 316
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEQEEGSEQTHIS 199
>gi|431891777|gb|ELK02311.1| Transcription factor SOX-17 [Pteropus alecto]
Length = 341
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR HM++HP+YKYRPRR+
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRR 142
>gi|390471050|ref|XP_002755793.2| PREDICTED: transcription factor SOX-8 [Callithrix jacchus]
Length = 446
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP-RRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+P RRK GQS ++ S + P P S S
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGQS--DSDSGAELGPHPGSGS 200
>gi|60360276|dbj|BAD90382.1| mKIAA4243 protein [Mus musculus]
Length = 565
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 208 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 237
>gi|110763018|ref|XP_001122993.1| PREDICTED: hypothetical protein LOC727284 [Apis mellifera]
Length = 458
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 7/58 (12%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF 59
+K+PFI+EA RLR +H +EHPDYKY+PRR+ + N S +G+P+ + ++ F
Sbjct: 143 DKKPFIEEADRLRVIHKREHPDYKYQPRRRKQ-------NGPSGREGSPSRSQSNVTF 193
>gi|395835685|ref|XP_003790805.1| PREDICTED: transcription factor SOX-8 [Otolemur garnettii]
Length = 462
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 176
>gi|354478829|ref|XP_003501617.1| PREDICTED: transcription factor SOX-8 [Cricetulus griseus]
gi|344248291|gb|EGW04395.1| Transcription factor SOX-8 [Cricetulus griseus]
Length = 463
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 144 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 173
>gi|327279949|ref|XP_003224717.1| PREDICTED: transcription factor SOX-9-like [Anolis carolinensis]
Length = 526
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 176 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 205
>gi|26329803|dbj|BAC28640.1| unnamed protein product [Mus musculus]
Length = 464
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 144 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 173
>gi|8924248|ref|NP_060889.1| transcription factor SOX-18 [Homo sapiens]
gi|12644232|sp|P35713.2|SOX18_HUMAN RecName: Full=Transcription factor SOX-18
gi|7658011|dbj|BAA94874.1| SOX18 [Homo sapiens]
gi|8894593|emb|CAB95835.1| SOX18 protein [Homo sapiens]
gi|12082687|gb|AAG48577.1| Sry-related HMG-box protein [Homo sapiens]
gi|24047297|gb|AAH38590.1| SRY (sex determining region Y)-box 18 [Homo sapiens]
gi|49257143|gb|AAH73971.1| SRY (sex determining region Y)-box 18 [Homo sapiens]
gi|111493896|gb|AAI11391.1| SRY (sex determining region Y)-box 18 [Homo sapiens]
gi|119595578|gb|EAW75172.1| hCG2039733 [Homo sapiens]
Length = 384
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 130 EKRPFVEEAERLRVQHLRDHPNYKYRPRRK 159
>gi|301605374|ref|XP_002932315.1| PREDICTED: transcription factor Sox-8-like [Xenopus (Silurana)
tropicalis]
Length = 466
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 179
>gi|259013518|ref|NP_001158501.1| sox11-like protein [Saccoglossus kowalevskii]
gi|197734711|gb|ACH73251.1| sox11-like protein [Saccoglossus kowalevskii]
Length = 339
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 29/32 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EK P+++EA+RLR +HM+E+PDYKYRPR+K K
Sbjct: 106 EKHPYVEEAERLRLLHMQEYPDYKYRPRKKAK 137
>gi|113367023|gb|ABI34568.1| sox9 [Bufo gargarizans]
Length = 481
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + T S
Sbjct: 150 EKRPFVEEAERLRIQHKKDHPDYKYQPRRR-----KSVKNGQAEQEDGSEQTHIS 199
>gi|45501110|gb|AAH67133.1| Sox9b protein [Danio rerio]
Length = 398
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 127 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 156
>gi|21727913|dbj|BAC02946.1| transcription factor SOX9 [Oryzias latipes]
gi|21727915|dbj|BAC02947.1| transcription factor SOX9 [Oryzias latipes]
gi|62082630|gb|AAX62152.1| Sry-box containing protein 9a [Oryzias latipes]
Length = 487
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 153 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 182
>gi|402881944|ref|XP_003904516.1| PREDICTED: transcription factor SOX-18 [Papio anubis]
Length = 384
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 130 EKRPFVEEAERLRVQHLRDHPNYKYRPRRK 159
>gi|109091282|ref|XP_001083465.1| PREDICTED: transcription factor SOX-18 [Macaca mulatta]
Length = 384
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 130 EKRPFVEEAERLRVQHLRDHPNYKYRPRRK 159
>gi|449269918|gb|EMC80655.1| Transcription factor Sox-9, partial [Columba livia]
Length = 225
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEQEEGSEQTHIS 199
>gi|50950207|ref|NP_001002978.1| transcription factor SOX-9 [Canis lupus familiaris]
gi|61216612|sp|Q7YRJ7.1|SOX9_CANFA RecName: Full=Transcription factor SOX-9
gi|33285963|gb|AAP69840.1| SOX9 [Canis lupus familiaris]
Length = 513
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|301777101|ref|XP_002923970.1| PREDICTED: transcription factor SOX-9-like [Ailuropoda melanoleuca]
Length = 462
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|194380472|dbj|BAG58389.1| unnamed protein product [Homo sapiens]
Length = 445
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 179
>gi|45382023|ref|NP_990062.1| transcription factor SOX-8 [Gallus gallus]
gi|10720295|sp|P57074.1|SOX8_CHICK RecName: Full=Transcription factor SOX-8
gi|8163918|gb|AAF73917.1|AF228664_1 SOX8 transcription factor [Gallus gallus]
Length = 470
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS
Sbjct: 154 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKAGQS 191
>gi|355568875|gb|EHH25156.1| hypothetical protein EGK_08928, partial [Macaca mulatta]
Length = 356
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 61 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 110
>gi|242017947|ref|XP_002429445.1| transcription factor Sox-2, putative [Pediculus humanus corporis]
gi|212514377|gb|EEB16707.1| transcription factor Sox-2, putative [Pediculus humanus corporis]
Length = 347
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 29/30 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
++RP+++EA+RLR +HM+EHP+YKYRPRR+
Sbjct: 14 DRRPYVEEAERLRVIHMQEHPNYKYRPRRR 43
>gi|11526785|gb|AAG36779.1| Sox9 [Eublepharis macularius]
Length = 490
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 146 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 175
>gi|157311661|ref|NP_001098555.1| transcription factor SOX9 [Oryzias latipes]
gi|21956090|dbj|BAC06353.1| SOX9 longer form [Oryzias latipes]
Length = 565
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 231 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 260
>gi|213958585|gb|ACJ54689.1| SRY-like HMG box protein 3b [Odorrana schmackeri]
Length = 71
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/28 (85%), Positives = 27/28 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPR 29
EKRPFIDEAKRLRA+ MKE+P+YKYRPR
Sbjct: 44 EKRPFIDEAKRLRAVRMKEYPNYKYRPR 71
>gi|195537625|dbj|BAG67029.1| SoxE protein [Lethenteron camtschaticum]
Length = 446
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 86 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 115
>gi|83405134|gb|AAI11366.1| SOX17 protein [Homo sapiens]
gi|116283499|gb|AAH30209.1| SOX17 protein [Homo sapiens]
Length = 162
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 145
>gi|345451238|gb|AEN94299.1| transcription factor SOX-9 [Talpa occidentalis]
Length = 294
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|329664600|ref|NP_001193180.1| transcription factor SOX-17 [Bos taurus]
gi|296480652|tpg|DAA22767.1| TPA: SRY-box 17-like [Bos taurus]
Length = 410
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR HM++HP+YKYRPRR+
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRR 142
>gi|8072315|gb|AAF71975.1|AF265207_1 transcription factor SOX-9 [Equus caballus]
Length = 77
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 2 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 51
>gi|332240000|ref|XP_003269178.1| PREDICTED: transcription factor SOX-8 [Nomascus leucogenys]
Length = 446
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 176
>gi|194216716|ref|XP_001498474.2| PREDICTED: transcription factor SOX-9 [Equus caballus]
Length = 444
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 179
>gi|18859411|ref|NP_571719.1| SRY-box containing gene 9b [Danio rerio]
gi|9964083|gb|AAG09815.1|AF277097_1 HMG box transcription factor Sox9b [Danio rerio]
Length = 407
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 136 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 165
>gi|30179903|ref|NP_055402.2| transcription factor SOX-8 [Homo sapiens]
gi|10720294|sp|P57073.1|SOX8_HUMAN RecName: Full=Transcription factor SOX-8
gi|7025447|gb|AAF35886.1|AF226675_1 transcription factor SOX8 [Homo sapiens]
gi|14336729|gb|AAK61260.1|AE006465_6 SRY (sex determining region Y)-box 8 [Homo sapiens]
gi|21619302|gb|AAH31797.1| SRY (sex determining region Y)-box 8 [Homo sapiens]
gi|208967496|dbj|BAG73762.1| SRY (sex determining region Y)-box 8 [synthetic construct]
Length = 446
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 176
>gi|410981642|ref|XP_003997175.1| PREDICTED: uncharacterized protein LOC101094803 [Felis catus]
Length = 677
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 355 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 404
>gi|291406447|ref|XP_002719545.1| PREDICTED: transcription factor SOX9 [Oryctolagus cuniculus]
Length = 506
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 199
>gi|61216340|sp|Q864R1.1|SRY_BALBN RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|61216341|sp|Q864R2.1|SRY_BALAC RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|30016707|dbj|BAC75641.1| testis determining factor [Balaenoptera acutorostrata]
gi|30016709|dbj|BAC75642.1| testis determining factor [Balaenoptera bonaerensis]
Length = 204
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS 44
EK+PF +EA+RLRAMH ++P YKYRPRRK K P + +P + S
Sbjct: 99 EKQPFFEEAQRLRAMHRDKYPGYKYRPRRKAKRPQKLLPADSS 141
>gi|7158399|gb|AAF37424.1|AF164104_1 transcription factor SOX8, partial [Homo sapiens]
Length = 328
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 29 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 58
>gi|61216173|sp|Q67EX7.1|SRY_MOSBE RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|37223161|gb|AAQ67730.1| SRY [Moschus berezovskii]
Length = 227
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIP 40
EKRPF +EA+RL A+H ++P YKYRPRRK K P S+P
Sbjct: 99 EKRPFFEEAQRLLAIHQDKYPGYKYRPRRKAKRPQNSLP 137
>gi|115495255|ref|NP_001069257.1| transcription factor SOX-18 [Bos taurus]
gi|111308622|gb|AAI20385.1| SRY (sex determining region Y)-box 18 [Bos taurus]
Length = 389
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 130 EKRPFVEEAERLRVQHLRDHPNYKYRPRRK 159
>gi|391333632|ref|XP_003741216.1| PREDICTED: transcription factor Sox-9-A-like [Metaseiulus
occidentalis]
Length = 233
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFI+EA RLR +H KE+PDYKY+PRR+ +
Sbjct: 92 EKRPFIEEADRLRILHKKEYPDYKYQPRRRIR 123
>gi|148233742|ref|NP_001083964.1| transcription factor Sox-8 [Xenopus laevis]
gi|82127861|sp|Q6VVD7.1|SOX8_XENLA RecName: Full=Transcription factor Sox-8
gi|34398220|gb|AAQ67212.1| Sox8 [Xenopus laevis]
gi|213626492|gb|AAI69521.1| Sox8 protein [Xenopus laevis]
gi|213626494|gb|AAI69525.1| Sox8 protein [Xenopus laevis]
Length = 459
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 143 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 172
>gi|134122700|dbj|BAF49647.1| testis determining factor [Balaenoptera borealis]
gi|134122702|dbj|BAF49648.1| testis determining factor [Balaenoptera brydei]
gi|134122704|dbj|BAF49649.1| testis determining factor [Balaenoptera edeni]
Length = 204
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS 44
EK+PF +EA+RLRAMH ++P YKYRPRRK K P + +P + S
Sbjct: 99 EKQPFFEEAQRLRAMHRDKYPGYKYRPRRKAKRPQKLLPADSS 141
>gi|196016573|ref|XP_002118138.1| hypothetical protein TRIADDRAFT_17959 [Trichoplax adhaerens]
gi|190579264|gb|EDV19363.1| hypothetical protein TRIADDRAFT_17959 [Trichoplax adhaerens]
Length = 93
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPFI+EAKRL A+HMK HP+YKYRPRR+
Sbjct: 53 EKRPFINEAKRLHAVHMKIHPEYKYRPRRR 82
>gi|427784255|gb|JAA57579.1| Putative hmg-box transcription factor [Rhipicephalus pulchellus]
Length = 412
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
E++P+I+EA RLR +HM+E+PDYKYRPR+K
Sbjct: 97 ERKPYIEEADRLRLLHMQEYPDYKYRPRKK 126
>gi|358418777|ref|XP_608786.5| PREDICTED: transcription factor SOX-8 [Bos taurus]
gi|359079452|ref|XP_002698019.2| PREDICTED: transcription factor SOX-8 [Bos taurus]
Length = 462
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 176
>gi|134122698|dbj|BAF49646.1| testis determining factor [Eubalaena japonica]
Length = 204
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS 44
EK+PF +EA+RLRAMH ++P YKYRPRRK K P + +P + S
Sbjct: 99 EKQPFFEEAQRLRAMHRNKYPGYKYRPRRKAKRPQKLLPADSS 141
>gi|146747219|gb|ABQ44208.1| SRY-box containing gene 9 [Aspidoscelis inornata]
Length = 321
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + T S
Sbjct: 72 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEQEEGTEQTHIS 121
>gi|147900011|ref|NP_001082104.1| transcription factor Sox-18B [Xenopus laevis]
gi|82177427|sp|Q90ZH7.1|SX18B_XENLA RecName: Full=Transcription factor Sox-18B; Short=xSox18beta;
AltName: Full=SRY (sex determining region Y)-box 18B
gi|14422422|dbj|BAB60830.1| xSox18beta [Xenopus laevis]
gi|47939715|gb|AAH72123.1| XSox18beta protein [Xenopus laevis]
Length = 361
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 111 EKRPFVEEAERLRVQHLQDHPNYKYRPRRK 140
>gi|395747274|ref|XP_002825986.2| PREDICTED: transcription factor SOX-8 [Pongo abelii]
Length = 446
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 176
>gi|390463754|ref|XP_003733093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-9-like
[Callithrix jacchus]
Length = 577
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 219 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 248
>gi|380022084|ref|XP_003694885.1| PREDICTED: uncharacterized protein LOC100865918 [Apis florea]
Length = 452
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 7/58 (12%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF 59
+K+PFI+EA RLR +H +EHPDYKY+PRR+ + N S +G+P+ ++ F
Sbjct: 142 DKKPFIEEADRLRVIHKREHPDYKYQPRRRKQ-------NGPSGREGSPSRNQSNVTF 192
>gi|358253080|dbj|GAA51933.1| transcription factor Sox-3-A [Clonorchis sinensis]
Length = 445
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 7/49 (14%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR-------KPKTPGQSIPNNK 43
EK P+++EA RLR HM+ +PDYKYRPRR KPK PGQ P K
Sbjct: 234 EKIPYVEEANRLRDCHMQCYPDYKYRPRRKQHRGKFKPKFPGQFSPQLK 282
>gi|336377152|gb|AEI54130.1| sex determining protein [Manis pentadactyla pentadactyla]
Length = 229
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 11/77 (14%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP---GQSIPNNKSPNQGAPAPTSASNA 58
EK PF EA+RL+A+H +++PDYKYRPRRK K G+S+P P+ + +
Sbjct: 99 EKWPFFQEAQRLQAVHREKYPDYKYRPRRKTKKQQKSGESLPTE-------PSTVTCTQV 151
Query: 59 FPSFPLPPYFANHGGGS 75
+ L P F N GG+
Sbjct: 152 VGNERLYP-FRNQDGGT 167
>gi|326929050|ref|XP_003210684.1| PREDICTED: transcription factor SOX-8-like, partial [Meleagris
gallopavo]
Length = 396
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS
Sbjct: 80 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKAGQS 117
>gi|296481134|tpg|DAA23249.1| TPA: SRY-box 18 [Bos taurus]
Length = 380
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 130 EKRPFVEEAERLRVQHLRDHPNYKYRPRRK 159
>gi|449478706|ref|XP_002191643.2| PREDICTED: transcription factor Sox-9 [Taeniopygia guttata]
Length = 267
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 179
>gi|61216338|sp|Q864R0.1|SRY_BALMU RecName: Full=Sex-determining region Y protein; AltName:
Full=Testis-determining factor
gi|30016711|dbj|BAC75643.1| testis determining factor [Balaenoptera musculus]
Length = 204
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS 44
EK+PF +EA+RLRAMH ++P YKYRPRRK K P + +P + S
Sbjct: 99 EKQPFFEEAQRLRAMHRDKYPGYKYRPRRKAKRPQKLLPADSS 141
>gi|355754337|gb|EHH58302.1| hypothetical protein EGM_08120, partial [Macaca fascicularis]
Length = 337
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 90 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 139
>gi|2506521|sp|P48434.2|SOX9_CHICK RecName: Full=Transcription factor SOX-9
gi|1589736|gb|AAB09663.1| Sox9 transcription factor [Gallus gallus]
Length = 494
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 151 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 180
>gi|355721326|gb|AES07225.1| SRY -box 9 [Mustela putorius furo]
Length = 198
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S
Sbjct: 43 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHIS 92
>gi|257096800|sp|Q6F2F0.2|S17B3_XENTR RecName: Full=Transcription factor Sox-17-beta.3; AltName: Full=SRY
(sex determining region Y)-box 17-beta.3
Length = 376
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 3 KRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
KRPF++EA+RLR H++++PDYKYRPRRK +
Sbjct: 104 KRPFVEEAERLRVQHIQDYPDYKYRPRRKKQV 135
>gi|55715624|gb|AAV59015.1| HMG-box transcription factor Sox9b [Danio rerio]
Length = 360
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 89 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 118
>gi|403280864|ref|XP_003931928.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor SOX-9 [Saimiri
boliviensis boliviensis]
Length = 646
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 264 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 293
>gi|91719178|gb|ABE57267.1| Sox3 protein [Panthera tigris altaica]
Length = 68
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/27 (88%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+P+YKYRP
Sbjct: 42 EKRPFIDEAKRLRAVHMKEYPNYKYRP 68
>gi|395506637|ref|XP_003757638.1| PREDICTED: transcription factor Sox-18A-like [Sarcophilus harrisii]
Length = 431
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 142 EKRPFVEEAERLRIQHLQDHPNYKYRPRRK 171
>gi|340724034|ref|XP_003400390.1| PREDICTED: transcription factor SOX-9-like [Bombus terrestris]
Length = 431
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 7/58 (12%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF 59
+K+PFI+EA RLR +H +EHPDYKY+PRR+ + N S +G+P+ ++ F
Sbjct: 135 DKKPFIEEADRLRVIHKREHPDYKYQPRRRKQ-------NGPSGREGSPSRNQSNVTF 185
>gi|194018646|ref|NP_001123409.1| transcription factor Sox-18 [Xenopus (Silurana) tropicalis]
gi|238055364|sp|B3DLD3.1|SOX18_XENTR RecName: Full=Transcription factor Sox-18; AltName: Full=SRY (sex
determining region Y)-box 18
gi|189441627|gb|AAI67402.1| sox18 protein [Xenopus (Silurana) tropicalis]
Length = 362
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 113 EKRPFVEEAERLRVQHLQDHPNYKYRPRRK 142
>gi|108773438|gb|ABG11745.1| SRY-box containing transcription factor 8 [Oreochromis niloticus]
Length = 75
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF+DEA+RLR H K+HPDYKY+PRRK
Sbjct: 46 EKRPFVDEAERLRVQHKKDHPDYKYQPRRK 75
>gi|426380633|ref|XP_004056967.1| PREDICTED: transcription factor SOX-8 [Gorilla gorilla gorilla]
Length = 446
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 176
>gi|84380303|gb|ABC58684.1| HMG box protein SoxE2 [Petromyzon marinus]
Length = 579
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAP 52
EKRPF++EA+RLR H K+HPDYKY+PRR+ + Q + N P P
Sbjct: 157 EKRPFVEEAERLRMQHKKDHPDYKYQPRRRKQ---QGKGDGADTNSAEPGP 204
>gi|45360971|ref|NP_988849.1| transcription factor Sox-17-beta.1 [Xenopus (Silurana) tropicalis]
gi|82133503|sp|Q8AWH2.1|S17B1_XENTR RecName: Full=Transcription factor Sox-17-beta.1; AltName: Full=SRY
(sex determining region Y)-box 17-beta.1;
Short=tSox17beta
gi|26224740|gb|AAN76330.1| HMG box transcription factor Sox17-beta [Xenopus (Silurana)
tropicalis]
gi|89271903|emb|CAJ82411.1| novel SRY (sex determining region Y)-box (sox) family protein
[Xenopus (Silurana) tropicalis]
Length = 376
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 3 KRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
KRPF++EA+RLR H++++PDYKYRPRRK +
Sbjct: 104 KRPFVEEAERLRVQHIQDYPDYKYRPRRKKQV 135
>gi|387914126|gb|AFK10672.1| transcription factor Sox-7 [Callorhinchus milii]
Length = 360
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRPF++EA+RLR HM++HP+YKYRPRRK
Sbjct: 86 QKRPFVEEAERLRVQHMQDHPNYKYRPRRK 115
>gi|350420702|ref|XP_003492595.1| PREDICTED: transcription factor SOX-9-like [Bombus impatiens]
Length = 431
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 7/58 (12%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAF 59
+K+PFI+EA RLR +H +EHPDYKY+PRR+ + N S +G+P+ ++ F
Sbjct: 135 DKKPFIEEADRLRVIHKREHPDYKYQPRRRKQ-------NGPSGREGSPSRNQSNVTF 185
>gi|7018298|emb|CAB75612.1| c394H11.1 (similar to SOX (SRY (sex determining region Y))) [Homo
sapiens]
gi|119606097|gb|EAW85691.1| SRY (sex determining region Y)-box 8, isoform CRA_a [Homo sapiens]
Length = 520
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 221 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 250
>gi|332147272|dbj|BAK20033.1| sex determining region Y protein [Meles meles]
Length = 219
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF +EA+RL+AMH +++PDYKYRPRRK
Sbjct: 99 EKRPFFEEAQRLQAMHREKYPDYKYRPRRK 128
>gi|51512413|gb|AAU05404.1| Sox9a2 [Tachysurus fulvidraco]
Length = 226
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 66 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR 96
>gi|332147274|dbj|BAK20034.1| sex determining region Y protein [Meles meles]
Length = 219
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF +EA+RL+AMH +++PDYKYRPRRK
Sbjct: 99 EKRPFFEEAQRLQAMHREKYPDYKYRPRRK 128
>gi|51599119|gb|AAU08210.1| transcription factor Sox9 [Acipenser schrenckii]
Length = 245
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + T S
Sbjct: 153 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQNEAEDGSEQTHIS----- 202
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAYPPMNM 92
P + A S PH S+S PP ++
Sbjct: 203 -PTAIFKALQQADS-PHSASSMSEVIPPASI 231
>gi|332147268|dbj|BAK20031.1| sex determining region Y protein [Meles leucurus]
gi|332147270|dbj|BAK20032.1| sex determining region Y protein [Meles leucurus]
Length = 219
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF +EA+RL+AMH +++PDYKYRPRRK
Sbjct: 99 EKRPFFEEAQRLQAMHREKYPDYKYRPRRK 128
>gi|307193574|gb|EFN76312.1| Putative transcription factor SOX-14 [Harpegnathos saltator]
Length = 509
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 29/34 (85%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP 35
+++PFI+EA+RLR +HM E+PDYKYRPR+K P
Sbjct: 48 QRKPFIEEAERLRKLHMMEYPDYKYRPRKKTSKP 81
>gi|50253591|gb|AAT71997.1| sox17beta [Xenopus (Silurana) tropicalis]
Length = 354
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 3 KRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
KRPF++EA+RLR H++++PDYKYRPRRK +
Sbjct: 82 KRPFVEEAERLRVQHIQDYPDYKYRPRRKKQV 113
>gi|387019081|gb|AFJ51658.1| Transcription factor SOX-10-like [Crotalus adamanteus]
Length = 461
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRPFI+EA+RLR H K+HPDYKY+PRR+
Sbjct: 143 DKRPFIEEAERLRMQHKKDHPDYKYQPRRR 172
>gi|395540908|ref|XP_003772392.1| PREDICTED: transcription factor SOX-10 [Sarcophilus harrisii]
Length = 537
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRPFI+EA+RLR H K+HPDYKY+PRR+
Sbjct: 218 DKRPFIEEAERLRMQHKKDHPDYKYQPRRR 247
>gi|269994370|dbj|BAI50349.1| SRY-box 9 [Leiolepis reevesii rubritaeniata]
Length = 200
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + T S
Sbjct: 65 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEQEEGSEQTHIS 114
>gi|259013594|ref|NP_001158345.1| SRY-box containing gene 17 [Oryzias latipes]
gi|227336652|gb|ACP21273.1| SRY-box containing gene 17 [Oryzias latipes]
Length = 398
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 29/33 (87%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EK+PF++EA+RLR HM++HP+YKYRPRR+ +
Sbjct: 110 EKQPFVEEAERLRVQHMQDHPNYKYRPRRRKQV 142
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.125 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,636,314,192
Number of Sequences: 23463169
Number of extensions: 155697152
Number of successful extensions: 580019
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2635
Number of HSP's successfully gapped in prelim test: 1847
Number of HSP's that attempted gapping in prelim test: 564918
Number of HSP's gapped (non-prelim): 11090
length of query: 213
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 77
effective length of database: 9,168,204,383
effective search space: 705951737491
effective search space used: 705951737491
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 73 (32.7 bits)