BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15631
(213 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24533|DICH_DROME SOX domain-containing protein dichaete OS=Drosophila melanogaster
GN=D PE=2 SV=1
Length = 382
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 76/159 (47%), Gaps = 33/159 (20%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGA---------PAP 52
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P + P Q
Sbjct: 187 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLTAGPQGGLQMQAGGMGQQKLGAGPG 246
Query: 53 TSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQ 112
A P LPPYFA P L YP +P YFG FD + SKL Q Q
Sbjct: 247 AGAGGYNPFHQLPPYFA---------PSHHLDQGYP---VP-YFGG-FDPLALSKLHQSQ 292
Query: 113 TSQADTKSSNAAAAV----------VSSFYSSLYPSVTS 141
+ A ++ +SSFYS +Y +++
Sbjct: 293 AAAAAAVNNQGQQQGQAPPQLPPTSLSSFYSGIYSGISA 331
>sp|Q6RVD7|SX21B_DANRE Transcription factor Sox-21-B OS=Danio rerio GN=sox21b PE=2 SV=1
Length = 245
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>sp|Q811W0|SOX21_MOUSE Transcription factor SOX-21 OS=Mus musculus GN=Sox21 PE=2 SV=1
Length = 276
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>sp|Q9Y651|SOX21_HUMAN Transcription factor SOX-21 OS=Homo sapiens GN=SOX21 PE=2 SV=1
Length = 276
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>sp|Q9W7R5|SOX21_CHICK Transcription factor SOX-21 OS=Gallus gallus GN=SOX21 PE=2 SV=1
Length = 280
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>sp|B0ZTE1|SOX21_XENLA Transcription factor Sox-21 OS=Xenopus laevis GN=sox21 PE=2 SV=1
Length = 262
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/33 (96%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMK+HPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKDHPDYKYRPRRKPKT 85
>sp|P48430|SOX2_CHICK Transcription factor SOX-2 OS=Gallus gallus GN=SOX2 PE=1 SV=1
Length = 315
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 84 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 116
>sp|Q6P0E1|SOX2_DANRE Transcription factor Sox-2 OS=Danio rerio GN=sox2 PE=2 SV=1
Length = 315
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 83 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 115
>sp|O42569|SOX2_XENLA Transcription factor Sox-2 OS=Xenopus laevis GN=sox2 PE=2 SV=1
Length = 311
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 82 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 114
>sp|Q6NVN0|SOX2_XENTR Transcription factor Sox-2 OS=Xenopus tropicalis GN=sox2 PE=2 SV=1
Length = 311
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 82 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 114
>sp|P54231|SOX2_SHEEP Transcription factor SOX-2 OS=Ovis aries GN=SOX2 PE=3 SV=1
Length = 320
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 89 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 121
>sp|P48431|SOX2_HUMAN Transcription factor SOX-2 OS=Homo sapiens GN=SOX2 PE=1 SV=1
Length = 317
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 86 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 118
>sp|P48432|SOX2_MOUSE Transcription factor SOX-2 OS=Mus musculus GN=Sox2 PE=1 SV=2
Length = 319
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 120
>sp|Q7SZS1|SX21A_DANRE Transcription factor Sox-21-A OS=Danio rerio GN=sox21a PE=2 SV=1
Length = 239
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKPKN 85
>sp|Q2Z1R2|SOX1B_DANRE Transcription factor Sox-1b OS=Danio rerio GN=sox1b PE=2 SV=1
Length = 340
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 82 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 110
>sp|Q9W7R6|SOX14_CHICK Transcription factor SOX-14 OS=Gallus gallus GN=SOX14 PE=2 SV=1
Length = 240
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>sp|A4QNG3|SOX14_XENTR Transcription factor Sox-14 OS=Xenopus tropicalis GN=sox14 PE=2
SV=1
Length = 239
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>sp|Q04892|SOX14_MOUSE Transcription factor SOX-14 OS=Mus musculus GN=Sox14 PE=2 SV=2
Length = 240
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>sp|P61259|SOX14_MACFA Transcription factor SOX-14 OS=Macaca fascicularis GN=SOX14 PE=2
SV=1
Length = 240
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>sp|O95416|SOX14_HUMAN Transcription factor SOX-14 OS=Homo sapiens GN=SOX14 PE=2 SV=1
Length = 240
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>sp|B0ZTE2|SOX14_XENLA Transcription factor Sox-14 OS=Xenopus laevis GN=sox14 PE=2 SV=1
Length = 239
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>sp|Q32PP9|SOX14_DANRE Transcription factor Sox-14 OS=Danio rerio GN=sox14 PE=2 SV=1
Length = 238
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>sp|Q6EJB7|SOX3_DANRE Transcription factor Sox-3 OS=Danio rerio GN=sox3 PE=1 SV=1
Length = 300
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 80 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 108
>sp|Q6DGL6|SOX1A_DANRE Transcription factor Sox-1a OS=Danio rerio GN=sox1a PE=2 SV=2
Length = 336
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/29 (100%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRAMHMKEHPDYKYRPRR
Sbjct: 82 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 110
>sp|Q2PG84|SOX1_XENLA Transcription factor Sox-1 OS=Xenopus laevis GN=sox1 PE=2 SV=1
Length = 393
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 79 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 107
>sp|A2TED3|SOX1_XENTR Transcription factor Sox-1 OS=Xenopus tropicalis GN=sox1 PE=2 SV=1
Length = 401
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 82 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 110
>sp|P53783|SOX1_MOUSE Transcription factor SOX-1 OS=Mus musculus GN=Sox1 PE=2 SV=1
Length = 391
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 96 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 124
>sp|O57401|SOX1_CHICK Transcription factor SOX-1 OS=Gallus gallus GN=SOX1 PE=2 SV=1
Length = 373
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 93 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 121
>sp|O00570|SOX1_HUMAN Transcription factor SOX-1 OS=Homo sapiens GN=SOX1 PE=1 SV=2
Length = 391
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 96 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 124
>sp|P47792|SX19A_DANRE Transcription factor Sox-19a OS=Danio rerio GN=sox19a PE=1 SV=2
Length = 297
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLRA+HMKE+PDYKY+PRRK K
Sbjct: 98 EKRPFIDEAKRLRALHMKEYPDYKYKPRRKTK 129
>sp|Q9DDD7|SX19B_DANRE Transcription factor Sox-19b OS=Danio rerio GN=sox19b PE=1 SV=1
Length = 292
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
+EKRPFIDEAKRLRA+HMKE+PDYKY+PRRK K
Sbjct: 96 VEKRPFIDEAKRLRAVHMKEYPDYKYKPRRKTK 128
>sp|Q68FA4|SOX3_XENTR Transcription factor Sox-3 OS=Xenopus tropicalis GN=sox3 PE=2 SV=1
Length = 307
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 85 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 113
>sp|P53784|SOX3_MOUSE Transcription factor SOX-3 OS=Mus musculus GN=Sox3 PE=1 SV=2
Length = 375
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 114 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 142
>sp|P48433|SOX3_CHICK Transcription factor SOX-3 OS=Gallus gallus GN=SOX3 PE=2 SV=1
Length = 312
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 91 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 119
>sp|P41225|SOX3_HUMAN Transcription factor SOX-3 OS=Homo sapiens GN=SOX3 PE=1 SV=2
Length = 446
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMKE+PDYKYRPRR
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRR 212
>sp|Q5FWM3|SOX3B_XENLA Transcription factor Sox-3-B OS=Xenopus laevis GN=sox3-b PE=2 SV=1
Length = 307
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/29 (89%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
EKRPFIDEAKRLRA+HMK++PDYKYRPRR
Sbjct: 85 EKRPFIDEAKRLRAVHMKDYPDYKYRPRR 113
>sp|P55863|SOX3A_XENLA Transcription factor Sox-3-A OS=Xenopus laevis GN=sox3-a PE=1 SV=1
Length = 309
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/29 (86%), Positives = 29/29 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRR 30
+KRPFIDEAKRLRA+HMK++PDYKYRPRR
Sbjct: 85 DKRPFIDEAKRLRAVHMKDYPDYKYRPRR 113
>sp|P40657|SOX15_DROME Putative transcription factor SOX-15 OS=Drosophila melanogaster
GN=Sox15 PE=2 SV=2
Length = 784
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI-PNNKSPNQGAPAP-TSASNAF 59
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ +++ P K ++ +P P T S +
Sbjct: 260 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSN 319
Query: 60 PSFPLPP 66
P PP
Sbjct: 320 PKLATPP 326
>sp|O60248|SOX15_HUMAN Protein SOX-15 OS=Homo sapiens GN=SOX15 PE=1 SV=1
Length = 233
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPG 36
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSG 128
>sp|P43267|SOX15_MOUSE Protein SOX-15 OS=Mus musculus GN=Sox15 PE=2 SV=3
Length = 231
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPF++EAKRLRA H++++PDYKYRPRRK K
Sbjct: 92 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKSK 123
>sp|Q6IZ48|SOX8_TETNG Transcription factor Sox-8 OS=Tetraodon nigroviridis GN=sox8 PE=2
SV=2
Length = 462
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQS 38
EKRPF+DEA+RLR H K+HPDYKY+PRR+ PGQS
Sbjct: 145 EKRPFVDEAERLRIQHKKDHPDYKYQPRRRKNVKPGQS 182
>sp|Q9H6I2|SOX17_HUMAN Transcription factor SOX-17 OS=Homo sapiens GN=SOX17 PE=1 SV=1
Length = 414
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK------PKTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P A P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGG 172
Query: 56 SNAFPSFPL----------PPYFANHGGGSHPHPLDSLSAAYPPMN---MPHYFGSPFDA 102
A L PP H GG H D S PP++ +P SP D
Sbjct: 173 RVAMDGLGLQFPEQGFPAGPPLLPPHMGG---HYRDCQSLGAPPLDGYPLPTPDTSPLDG 229
Query: 103 MN 104
++
Sbjct: 230 VD 231
>sp|P40667|CH03_CHICK SRY-related protein CH3 (Fragment) OS=Gallus gallus PE=2 SV=1
Length = 54
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+PDYKYRP
Sbjct: 28 EKRPFIDEAKRLRAVHMKEYPDYKYRP 54
>sp|P40642|AMA2_ALLMI SRY-related protein AMA2 (Fragment) OS=Alligator mississippiensis
PE=4 SV=2
Length = 54
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKE+P+YKYRP
Sbjct: 28 EKRPFIDEAKRLRAMHMKEYPNYKYRP 54
>sp|P40670|CH31_CHICK SRY-related protein CH31 (Fragment) OS=Gallus gallus PE=4 SV=1
Length = 54
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKE+P+YKYRP
Sbjct: 28 EKRPFIDEAKRLRAMHMKEYPNYKYRP 54
>sp|Q864Q5|SRY_KOGSI Sex-determining region Y protein OS=Kogia sima GN=SRY PE=3 SV=1
Length = 216
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS 44
EK+PF +EA+RLRAMH ++P YKYRPRRKPK P + +P + S
Sbjct: 99 EKQPFFEEAQRLRAMHRDKYPGYKYRPRRKPKRPQKLLPADSS 141
>sp|P48435|SOX11_CHICK Transcription factor SOX-11 OS=Gallus gallus GN=SOX11 PE=2 SV=1
Length = 396
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN-NKSPNQGAP 50
EK PFI EA+RLR HM ++PDYKYRPR+KPK + PN +SP + AP
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKMDPSAKPNAGQSPEKNAP 143
>sp|Q864Q6|SRY_PHYMC Sex-determining region Y protein OS=Physeter macrocephalus GN=SRY
PE=3 SV=1
Length = 216
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS 44
EK+PF +EA+RLRAMH ++P YKY PRRKPK P +S+P + S
Sbjct: 99 EKQPFFEEAQRLRAMHRDKYPGYKYHPRRKPKRPQESLPADSS 141
>sp|P40669|CH07_CHICK SRY-related protein CH7 (Fragment) OS=Gallus gallus PE=4 SV=1
Length = 54
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAM MKE+PDYKYRP
Sbjct: 28 EKRPFIDEAKRLRAMRMKEYPDYKYRP 54
>sp|P36389|SRY_HORSE Sex-determining region Y protein OS=Equus caballus GN=SRY PE=2 SV=2
Length = 223
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
EK PF +EA+RLRAMH +++PDYKYRPRRK K P +S
Sbjct: 99 EKLPFFEEAQRLRAMHQEKYPDYKYRPRRKAKMPQKS 135
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,956,514
Number of Sequences: 539616
Number of extensions: 3593818
Number of successful extensions: 13235
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 309
Number of HSP's that attempted gapping in prelim test: 12250
Number of HSP's gapped (non-prelim): 1193
length of query: 213
length of database: 191,569,459
effective HSP length: 113
effective length of query: 100
effective length of database: 130,592,851
effective search space: 13059285100
effective search space used: 13059285100
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)