Your job contains 1 sequence.
>psy15631
MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFP
SFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQTSQADTKS
SNAAAAVVSSFYSSLYPSVTSAQTKTFSTPPPSHLSALFQHPTAASSHPSQFLYGLKSEQ
LSPSSSPGESQSQSNNQSALELDQLRRPVPVIY
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15631
(213 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0000411 - symbol:D "Dichaete" species:7227 "Drosop... 222 7.1e-21 2
ZFIN|ZDB-GENE-060322-5 - symbol:sox1b "SRY-box containing... 174 2.9e-17 3
ZFIN|ZDB-GENE-040429-1 - symbol:sox21b "SRY-box containin... 182 6.0e-17 2
ZFIN|ZDB-GENE-990715-6 - symbol:sox21a "SRY-box containin... 173 6.0e-17 2
UNIPROTKB|Q9Y651 - symbol:SOX21 "Transcription factor SOX... 182 1.6e-16 2
MGI|MGI:2654070 - symbol:Sox21 "SRY-box containing gene 2... 182 1.6e-16 2
ZFIN|ZDB-GENE-980526-333 - symbol:sox3 "SRY-box containin... 183 2.9e-16 2
UNIPROTKB|B0ZTE1 - symbol:sox21 "Transcription factor Sox... 179 3.2e-16 2
ZFIN|ZDB-GENE-040718-186 - symbol:sox1a "SRY-box containi... 174 8.4e-16 2
UNIPROTKB|F1MIK5 - symbol:SOX1 "Uncharacterized protein" ... 171 1.6e-15 2
UNIPROTKB|O57401 - symbol:SOX1 "Transcription factor SOX-... 171 2.1e-15 2
UNIPROTKB|Q2PG84 - symbol:sox1 "Transcription factor Sox-... 171 2.1e-15 2
UNIPROTKB|P48430 - symbol:SOX2 "Transcription factor SOX-... 171 5.0e-15 2
UNIPROTKB|A2TED3 - symbol:sox1 "Transcription factor Sox-... 171 6.1e-15 2
UNIPROTKB|P48431 - symbol:SOX2 "Transcription factor SOX-... 171 6.7e-15 2
UNIPROTKB|O00570 - symbol:SOX1 "Transcription factor SOX-... 171 6.9e-15 2
UNIPROTKB|B1PXF9 - symbol:Sox2 "Sex determining region Y-... 171 7.0e-15 2
UNIPROTKB|A2VDX8 - symbol:SOX2 "Uncharacterized protein" ... 171 7.2e-15 2
UNIPROTKB|P54231 - symbol:SOX2 "Transcription factor SOX-... 171 7.2e-15 2
UNIPROTKB|E2R1W3 - symbol:SOX2 "Uncharacterized protein" ... 171 7.8e-15 2
FB|FBgn0036411 - symbol:Sox21a "Sox21a" species:7227 "Dro... 193 9.9e-15 1
MGI|MGI:98364 - symbol:Sox2 "SRY-box containing gene 2" s... 171 1.4e-14 2
RGD|1565646 - symbol:Sox2 "SRY (sex determining region Y)... 171 1.4e-14 2
MGI|MGI:98365 - symbol:Sox3 "SRY-box containing gene 3" s... 176 1.7e-14 2
UNIPROTKB|E2R3H4 - symbol:SOX15 "Uncharacterized protein"... 153 2.4e-14 2
UNIPROTKB|E2R800 - symbol:SOX3 "Uncharacterized protein" ... 173 3.1e-14 2
UNIPROTKB|I3LG51 - symbol:LOC100623770 "Uncharacterized p... 173 3.2e-14 2
UNIPROTKB|Q9W7R5 - symbol:SOX21 "Transcription factor SOX... 182 3.8e-14 1
UNIPROTKB|E1BHN5 - symbol:LOC614121 "Uncharacterized prot... 182 3.8e-14 1
WB|WBGene00004950 - symbol:sox-3 species:6239 "Caenorhabd... 179 7.9e-14 1
UNIPROTKB|P41225 - symbol:SOX3 "Transcription factor SOX-... 172 1.0e-13 2
FB|FBgn0042630 - symbol:Sox21b "Sox21b" species:7227 "Dro... 187 1.1e-13 1
WB|WBGene00004949 - symbol:sox-2 species:6239 "Caenorhabd... 178 1.2e-13 1
UNIPROTKB|F2Z520 - symbol:SOX21 "Uncharacterized protein"... 182 1.9e-13 1
UNIPROTKB|Q9PSV6 - symbol:Sox3 "SOX3" species:9031 "Gallu... 178 2.2e-13 1
UNIPROTKB|O95416 - symbol:SOX14 "Transcription factor SOX... 173 3.4e-13 1
UNIPROTKB|P61259 - symbol:SOX14 "Transcription factor SOX... 173 3.4e-13 1
MGI|MGI:98362 - symbol:Sox14 "SRY-box containing gene 14"... 173 3.4e-13 1
RGD|1309654 - symbol:Sox14 "SRY (sex determining region Y... 173 3.4e-13 1
FB|FBgn0005613 - symbol:Sox15 "Sox box protein 15" specie... 160 5.6e-13 2
FB|FBgn0029123 - symbol:SoxN "SoxNeuro" species:7227 "Dro... 180 6.1e-13 1
UNIPROTKB|A4IIJ8 - symbol:sox10 "Transcription factor Sox... 133 8.9e-13 3
UNIPROTKB|Q9W7R6 - symbol:SOX14 "Transcription factor SOX... 169 9.1e-13 1
UNIPROTKB|A4QNG3 - symbol:sox14 "Transcription factor Sox... 169 9.1e-13 1
UNIPROTKB|B0ZTE2 - symbol:sox14 "Transcription factor Sox... 169 9.1e-13 1
ZFIN|ZDB-GENE-051113-268 - symbol:sox14 "SRY-box containi... 169 9.1e-13 1
UNIPROTKB|Q8AXX8 - symbol:sox10 "Transcription factor Sox... 134 9.8e-13 3
UNIPROTKB|P48433 - symbol:SOX3 "Transcription factor SOX-... 172 1.0e-12 1
ZFIN|ZDB-GENE-980526-102 - symbol:sox19a "SRY-box contain... 172 1.1e-12 1
UNIPROTKB|O42569 - symbol:sox2 "Transcription factor Sox-... 171 1.3e-12 1
UNIPROTKB|Q6NVN0 - symbol:sox2 "Transcription factor Sox-... 171 1.3e-12 1
ZFIN|ZDB-GENE-030909-1 - symbol:sox2 "SRY-box containing ... 171 1.4e-12 1
UNIPROTKB|Q68FA4 - symbol:sox3 "Transcription factor Sox-... 170 1.6e-12 1
UNIPROTKB|E1B9L6 - symbol:SOX15 "Uncharacterized protein"... 166 1.9e-12 1
UNIPROTKB|P56693 - symbol:SOX10 "Transcription factor SOX... 128 3.4e-12 2
UNIPROTKB|F1NSW6 - symbol:SOX11 "Transcription factor SOX... 153 4.1e-12 2
UNIPROTKB|P55863 - symbol:sox3-a "Transcription factor So... 165 6.2e-12 1
UNIPROTKB|P35713 - symbol:SOX18 "Transcription factor SOX... 167 7.0e-12 1
UNIPROTKB|F1ST29 - symbol:SOX15 "Uncharacterized protein"... 160 8.2e-12 1
ZFIN|ZDB-GENE-010111-1 - symbol:sox19b "SRY-box containin... 163 8.5e-12 1
UNIPROTKB|Q5FWM3 - symbol:sox3-b "Transcription factor So... 161 1.7e-11 1
UNIPROTKB|Q90ZH8 - symbol:sox18-a "Transcription factor S... 133 2.4e-11 2
UNIPROTKB|B3DLD3 - symbol:sox18 "Transcription factor Sox... 132 2.4e-11 2
UNIPROTKB|P57074 - symbol:SOX8 "Transcription factor SOX-... 135 3.6e-11 2
UNIPROTKB|O18896 - symbol:SOX9 "Transcription factor SOX-... 135 3.6e-11 2
UNIPROTKB|F1P1Z5 - symbol:SOX8 "Transcription factor SOX-... 135 4.5e-11 2
UNIPROTKB|E2R0K1 - symbol:SOX8 "Uncharacterized protein" ... 161 4.7e-11 1
RGD|1305371 - symbol:Sox17 "SRY (sex determining region Y... 141 4.8e-11 2
UNIPROTKB|Q6VVD7 - symbol:sox8 "Transcription factor Sox-... 135 5.3e-11 2
UNIPROTKB|Q66JF1 - symbol:sox11 "Transcription factor Sox... 157 8.7e-11 1
UNIPROTKB|Q90ZH7 - symbol:sox18-b "Transcription factor S... 136 9.3e-11 2
UNIPROTKB|B4DWU7 - symbol:SOX15 "Protein SOX-15" species:... 150 9.4e-11 1
UNIPROTKB|O60248 - symbol:SOX15 "Protein SOX-15" species:... 150 9.4e-11 1
MGI|MGI:98363 - symbol:Sox15 "SRY-box containing gene 15"... 150 9.4e-11 1
MGI|MGI:103559 - symbol:Sox18 "SRY-box containing gene 18... 156 1.1e-10 1
RGD|1311718 - symbol:Sox18 "SRY (sex determining region Y... 156 1.1e-10 1
RGD|1309072 - symbol:Sox8 "SRY (sex determining region Y)... 131 1.9e-10 2
UNIPROTKB|F1NFH7 - symbol:SOX2 "Transcription factor SOX-... 147 2.0e-10 1
UNIPROTKB|P48435 - symbol:SOX11 "Transcription factor SOX... 153 2.5e-10 1
MGI|MGI:98370 - symbol:Sox8 "SRY-box containing gene 8" s... 131 3.0e-10 2
UNIPROTKB|Q9H6I2 - symbol:SOX17 "Transcription factor SOX... 152 3.6e-10 1
UNIPROTKB|G3N274 - symbol:Bt.30086 "Uncharacterized prote... 143 5.2e-10 1
UNIPROTKB|F6RRS7 - symbol:SOX18 "Uncharacterized protein"... 150 5.2e-10 1
UNIPROTKB|P48434 - symbol:SOX9 "Transcription factor SOX-... 134 7.3e-10 2
UNIPROTKB|Q91731 - symbol:sox11-a "Transcription factor S... 148 8.3e-10 1
UNIPROTKB|F1NFP0 - symbol:SOX7 "Uncharacterized protein" ... 122 8.4e-10 2
UNIPROTKB|P40650 - symbol:sox11-b "Transcription factor S... 147 1.0e-09 1
UNIPROTKB|Q3KQ35 - symbol:sox17a-a "Transcription factor ... 147 1.1e-09 1
UNIPROTKB|P40667 - symbol:P40667 "SRY-related protein CH3... 140 1.1e-09 1
ZFIN|ZDB-GENE-011207-1 - symbol:sox10 "SRY-box containing... 127 1.2e-09 2
UNIPROTKB|P40670 - symbol:P40670 "SRY-related protein CH3... 139 1.4e-09 1
MGI|MGI:98359 - symbol:Sox11 "SRY-box containing gene 11"... 146 1.5e-09 1
RGD|69351 - symbol:Sox11 "SRY (sex determining region Y)-... 146 1.5e-09 1
UNIPROTKB|P40666 - symbol:P40666 "SRY-related protein CH2... 138 1.8e-09 1
UNIPROTKB|P40668 - symbol:P40668 "SRY-related protein CH4... 138 1.8e-09 1
MGI|MGI:98369 - symbol:Sox7 "SRY-box containing gene 7" s... 126 1.8e-09 2
UNIPROTKB|Q28GD5 - symbol:sox7 "Transcription factor Sox-... 123 1.9e-09 2
UNIPROTKB|F1RSI1 - symbol:SOX17 "Uncharacterized protein"... 145 2.0e-09 1
UNIPROTKB|P40665 - symbol:P40665 "SRY-related protein CH1... 137 2.2e-09 1
UNIPROTKB|Q8AWH3 - symbol:sox17a "Transcription factor So... 144 2.3e-09 1
WARNING: Descriptions of 75 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0000411 [details] [associations]
symbol:D "Dichaete" species:7227 "Drosophila melanogaster"
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008301 "DNA binding, bending"
evidence=NAS;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0035120 "post-embryonic appendage
morphogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0007442 "hindgut morphogenesis"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IDA] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP] [GO:0060810 "intracellular mRNA
localization involved in pattern specification process"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0007420 EMBL:AE014296 GO:GO:0043565
GO:GO:0045944 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0003730 GO:GO:0009950 GO:GO:0002168 GO:GO:0007350
GeneTree:ENSGT00690000101940 EMBL:U68056 EMBL:X96419 EMBL:AY118670
EMBL:BT030105 RefSeq:NP_524066.1 UniGene:Dm.1835
ProteinModelPortal:Q24533 SMR:Q24533 DIP:DIP-21577N
MINT:MINT-800284 STRING:Q24533 PRIDE:Q24533
EnsemblMetazoa:FBtr0075746 EnsemblMetazoa:FBtr0333034
EnsemblMetazoa:FBtr0333035 EnsemblMetazoa:FBtr0333036 GeneID:39570
KEGG:dme:Dmel_CG5893 FlyBase:FBgn0000411 eggNOG:NOG319555
InParanoid:Q24533 OMA:QEGHIKR OrthoDB:EOG4HHMJQ PhylomeDB:Q24533
GenomeRNAi:39570 NextBio:814319 Bgee:Q24533 GermOnline:CG5893
GO:GO:0007442 GO:GO:0060810 GO:GO:0035120 Uniprot:Q24533
Length = 382
Score = 222 (83.2 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 62/124 (50%), Positives = 67/124 (54%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQ---------GAPAP 52
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK P + P Q GA
Sbjct: 187 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKNPLTAGPQGGLQMQAGGMGQQKLGAGPG 246
Query: 53 TSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQ 112
A P LPPYFA SH H L YP +P YFG FD + SKL Q Q
Sbjct: 247 AGAGGYNPFHQLPPYFAP----SH-H----LDQGYP---VP-YFGG-FDPLALSKLHQSQ 292
Query: 113 TSQA 116
+ A
Sbjct: 293 AAAA 296
Score = 45 (20.9 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 8/9 (88%), Positives = 9/9 (100%)
Query: 205 LRRPVPVIY 213
LRRPVPV+Y
Sbjct: 374 LRRPVPVLY 382
>ZFIN|ZDB-GENE-060322-5 [details] [associations]
symbol:sox1b "SRY-box containing gene 1b"
species:7955 "Danio rerio" [GO:0005667 "transcription factor
complex" evidence=IC] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 ZFIN:ZDB-GENE-060322-5 GO:GO:0007275 GO:GO:0051091
GO:GO:0003677 GO:GO:0006351 GO:GO:0005667 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816
GeneTree:ENSGT00690000101940 HOGENOM:HOG000231647 KO:K09267
InterPro:IPR022097 Pfam:PF12336 OrthoDB:EOG40K80Q
HOVERGEN:HBG105663 EMBL:AB242328 EMBL:AL929216 EMBL:BC154495
IPI:IPI00498420 RefSeq:NP_001032751.1 UniGene:Dr.52415
ProteinModelPortal:Q2Z1R2 SMR:Q2Z1R2 STRING:Q2Z1R2 PRIDE:Q2Z1R2
Ensembl:ENSDART00000010894 GeneID:562710 KEGG:dre:562710 CTD:562710
InParanoid:Q2Z1R2 OMA:AMSTTHA NextBio:20884544 Bgee:Q2Z1R2
Uniprot:Q2Z1R2
Length = 340
Score = 174 (66.3 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 32/33 (96%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK KT
Sbjct: 82 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKT 114
Score = 38 (18.4 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 21/108 (19%), Positives = 38/108 (35%)
Query: 70 NHGGGSHPH---PL---DSLSAAYPPM-NMPHYFGSPFDAMNFSKLVQGQTSQADTKXXX 122
+HG HPH P+ + + Y P+ N Y + Q Q S +
Sbjct: 207 HHGHHHHPHNPQPMHRYEMTALQYSPLSNSQSYMSASPSGYGGISYTQHQNSSVASSGAI 266
Query: 123 XXXXXXXXXXXXLYPSVTSAQTKTFSTPPPSHLSALFQHPTAASSHPS 170
+ P V +A ++ + + +++ PTA + PS
Sbjct: 267 GALGSLVKSEPSVSPPV-NAHSRAPCSGDLREMISMYL-PTAEAGDPS 312
Score = 35 (17.4 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 69 ANHGGGSHPHP 79
A+H G H HP
Sbjct: 204 AHHHHGHHHHP 214
>ZFIN|ZDB-GENE-040429-1 [details] [associations]
symbol:sox21b "SRY-box containing gene 21 b"
species:7955 "Danio rerio" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-040429-1 GO:GO:0005634 GO:GO:0043565 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00690000101940 HSSP:P48431
eggNOG:NOG302715 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 OrthoDB:EOG40K80Q OMA:KPKTLMK EMBL:AY489186
EMBL:CT027987 EMBL:BC095366 IPI:IPI00492387 RefSeq:NP_001009888.1
UniGene:Dr.116538 ProteinModelPortal:Q6RVD7 SMR:Q6RVD7
STRING:Q6RVD7 PRIDE:Q6RVD7 Ensembl:ENSDART00000003310 GeneID:406246
KEGG:dre:406246 CTD:406246 InParanoid:Q6RVD7 NextBio:20817881
Bgee:Q6RVD7 Uniprot:Q6RVD7
Length = 245
Score = 182 (69.1 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
Score = 40 (19.1 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 51 APTSASNAFP-SFPLPPY-FANH-GGGSHPHPLDSLSAAYPPMNMP 93
+P S S A P +P F+ GGG+H H S P +P
Sbjct: 162 SPPSFSYASPLGYPTAATAFSGAVGGGAHTHTHSHPSPGNPGYMIP 207
>ZFIN|ZDB-GENE-990715-6 [details] [associations]
symbol:sox21a "SRY-box containing gene 21a"
species:7955 "Danio rerio" [GO:0009953 "dorsal/ventral pattern
formation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA;ISS;IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA;IMP] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 ZFIN:ZDB-GENE-990715-6 GO:GO:0005634 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009953
GeneTree:ENSGT00690000101940 GO:GO:0001071 HSSP:P48431
eggNOG:NOG302715 HOGENOM:HOG000231647 OrthoDB:EOG40K80Q
EMBL:AF101266 EMBL:U85092 EMBL:AL591389 EMBL:BC056274 EMBL:BC065639
IPI:IPI00506374 RefSeq:NP_571361.1 UniGene:Dr.132865
ProteinModelPortal:Q7SZS1 SMR:Q7SZS1 PRIDE:Q7SZS1
Ensembl:ENSDART00000049339 GeneID:30543 KEGG:dre:30543 CTD:30543
InParanoid:Q9YH21 NextBio:20806923 Bgee:Q7SZS1 Uniprot:Q7SZS1
Length = 239
Score = 173 (66.0 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 31/32 (96%), Positives = 32/32 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKPK 84
Score = 49 (22.3 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 68 FANHGGGSHPHP---LDSLSAAYPPMNMPHY 95
F +H ++P+P L+S + PP PHY
Sbjct: 135 FFSHHLSANPYPFLDLNSKISELPPAPFPHY 165
>UNIPROTKB|Q9Y651 [details] [associations]
symbol:SOX21 "Transcription factor SOX-21" species:9606
"Homo sapiens" [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=NAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=NAS]
InterPro:IPR009071 EMBL:AF107044 Pfam:PF00505 GO:GO:0005634
GO:GO:0043588 GO:GO:0003677 GO:GO:0048863 GO:GO:0045665
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:CH471085 GO:GO:0001942 GO:GO:0000981 eggNOG:NOG302715
HOGENOM:HOG000231647 HOVERGEN:HBG105618 KO:K09267
InterPro:IPR022097 Pfam:PF12336 EMBL:AL137061 EMBL:X71136
EMBL:X65666 IPI:IPI00001824 PIR:I38238 PIR:S22937
RefSeq:NP_009015.1 UniGene:Hs.187577 ProteinModelPortal:Q9Y651
SMR:Q9Y651 STRING:Q9Y651 PhosphoSite:Q9Y651 DMDM:6831690
PRIDE:Q9Y651 DNASU:11166 Ensembl:ENST00000376945 GeneID:11166
KEGG:hsa:11166 UCSC:uc001vma.3 CTD:11166 GeneCards:GC13M095361
H-InvDB:HIX0037360 HGNC:HGNC:11197 MIM:604974 neXtProt:NX_Q9Y651
PharmGKB:PA36034 InParanoid:Q9Y651 OMA:KPKTLMK OrthoDB:EOG4S1T8V
PhylomeDB:Q9Y651 GenomeRNAi:11166 NextBio:42483 Bgee:Q9Y651
CleanEx:HS_SOX21 Genevestigator:Q9Y651 GermOnline:ENSG00000125285
Uniprot:Q9Y651
Length = 276
Score = 182 (69.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
Score = 36 (17.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 52 PTSASNAF--PSFPLPPYFANHGGGSHPHP 79
PT+ + AF + A GG +H HP
Sbjct: 198 PTAGAGAFHGAAAAAAAAAAAAGGHTHSHP 227
>MGI|MGI:2654070 [details] [associations]
symbol:Sox21 "SRY-box containing gene 21" species:10090 "Mus
musculus" [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0042633 "hair cycle" evidence=IMP] [GO:0043588 "skin
development" evidence=IMP] [GO:0045665 "negative regulation of
neuron differentiation" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR009071 PROSITE:PS00353
MGI:MGI:2654070 Pfam:PF00505 GO:GO:0005634 GO:GO:0043588
GO:GO:0003677 GO:GO:0048863 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001942 GeneTree:ENSGT00690000101940
CleanEx:MM_SOX21 eggNOG:NOG302715 HOGENOM:HOG000231647
HOVERGEN:HBG105618 KO:K09267 InterPro:IPR022097 Pfam:PF12336
CTD:11166 OMA:KPKTLMK EMBL:AY142959 EMBL:AY069926 EMBL:BC069176
EMBL:BC147556 EMBL:BC147565 IPI:IPI00453678 RefSeq:NP_808421.1
UniGene:Mm.70950 ProteinModelPortal:Q811W0 SMR:Q811W0 STRING:Q811W0
PhosphoSite:Q811W0 PRIDE:Q811W0 Ensembl:ENSMUST00000082178
Ensembl:ENSMUST00000170662 GeneID:223227 KEGG:mmu:223227
UCSC:uc007uyt.2 NextBio:376665 Bgee:Q811W0 Genevestigator:Q811W0
GermOnline:ENSMUSG00000061517 Uniprot:Q811W0
Length = 276
Score = 182 (69.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
Score = 36 (17.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 52 PTSASNAF--PSFPLPPYFANHGGGSHPHP 79
PT+ + AF + A GG +H HP
Sbjct: 198 PTAGAGAFHGAAAAAAAAAAAAGGHTHSHP 227
>ZFIN|ZDB-GENE-980526-333 [details] [associations]
symbol:sox3 "SRY-box containing gene 3"
species:7955 "Danio rerio" [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0043049 "otic
placode formation" evidence=IGI;IMP] [GO:0007422 "peripheral
nervous system development" evidence=IGI;IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-980526-333
GO:GO:0005634 GO:GO:0051091 GO:GO:0030182 GO:GO:0003677
GO:GO:0007422 GO:GO:0007417 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816
GeneTree:ENSGT00690000101940 OrthoDB:EOG45MN6C GO:GO:0043049
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 CTD:6658 EMBL:AY316135 EMBL:AB242330
EMBL:AB117960 EMBL:BX088596 EMBL:BC092845 IPI:IPI00551951
RefSeq:NP_001001811.2 UniGene:Dr.104569 ProteinModelPortal:Q6EJB7
SMR:Q6EJB7 STRING:Q6EJB7 Ensembl:ENSDART00000075617 GeneID:30529
KEGG:dre:30529 InParanoid:Q6EJB7 OMA:NNSANDP NextBio:20806912
ArrayExpress:Q6EJB7 Bgee:Q6EJB7 Uniprot:Q6EJB7
Length = 300
Score = 183 (69.5 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 46/95 (48%), Positives = 53/95 (55%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK KT + + AP + +NA
Sbjct: 80 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYSLPGGLLAPGANAVNNAVSV 139
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAYP--P-MNMP 93
Y +G + + L AYP P MN P
Sbjct: 140 GQRMDYTHMNGWTNSAYSLMQDQLAYPQHPSMNSP 174
Score = 36 (17.7 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 136 YPSVTSAQTKTFSTPPPSHLSALFQHPTAAS 166
YP +++AQT + S +S + T+++
Sbjct: 189 YPMMSTAQTYMNAASTYSSMSPAYTQQTSSA 219
>UNIPROTKB|B0ZTE1 [details] [associations]
symbol:sox21 "Transcription factor Sox-21" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0007399 "nervous
system development" evidence=IEP] [GO:0043565 "sequence-specific
DNA binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 KO:K09267 InterPro:IPR022097
Pfam:PF12336 CTD:11166 EMBL:EU403424 RefSeq:NP_001165684.1
UniGene:Xl.85657 ProteinModelPortal:B0ZTE1 SMR:B0ZTE1
GeneID:100337612 KEGG:xla:100337612 Xenbase:XB-GENE-6464309
Uniprot:B0ZTE1
Length = 262
Score = 179 (68.1 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 32/33 (96%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMK+HPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKDHPDYKYRPRRKPKT 85
Score = 36 (17.7 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 52 PTSASNAFPSFPLPPYFANHGGG-SHPHP 79
P ++S +P + GGG +H HP
Sbjct: 184 PYTSSIGYPQSSGGAFAGVTGGGHTHSHP 212
>ZFIN|ZDB-GENE-040718-186 [details] [associations]
symbol:sox1a "SRY-box containing gene 1a"
species:7955 "Danio rerio" [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IC] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-040718-186
GO:GO:0007275 GO:GO:0051091 GO:GO:0003677 GO:GO:0006351
GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 eggNOG:NOG321816 GeneTree:ENSGT00690000101940
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
EMBL:AB242327 EMBL:CR392332 EMBL:BC076326 EMBL:BC096992
IPI:IPI00492442 RefSeq:NP_001002483.1 UniGene:Dr.6453
ProteinModelPortal:Q6DGL6 SMR:Q6DGL6 STRING:Q6DGL6
Ensembl:ENSDART00000102021 GeneID:436756 KEGG:dre:436756 CTD:436756
HOVERGEN:HBG105663 InParanoid:Q6DGL6 OMA:MHRYDMT OrthoDB:EOG40K80R
NextBio:20831193 Bgee:Q6DGL6 Uniprot:Q6DGL6
Length = 336
Score = 174 (66.3 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 32/33 (96%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK KT
Sbjct: 82 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKT 114
Score = 46 (21.3 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 26/111 (23%), Positives = 35/111 (31%)
Query: 67 YFANHGGGSHPHPL---DSLSAAYPPM-NMPHYFGSPFDAMNFSKLVQGQTSQADTKXXX 122
+ A+H +P P+ D + Y P+ N Y + Q Q S T
Sbjct: 203 HHAHHHHPHNPQPMHRYDMTALQYSPISNSQSYMSASPSGYGGISYTQHQNSSVATSAAI 262
Query: 123 XXXXXXXXXXXXLYPSVTSAQTKTFSTPP-PSHLSALFQH--PTAASSHPS 170
+ P VT T S P P L + PT S PS
Sbjct: 263 GTLSSLVKSEPNISPPVT-----THSRGPCPGDLREMISMYLPTGESGDPS 308
>UNIPROTKB|F1MIK5 [details] [associations]
symbol:SOX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0021884 "forebrain neuron development" evidence=IEA]
[GO:0021521 "ventral spinal cord interneuron specification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0002089 "lens
morphogenesis in camera-type eye" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001046 GeneTree:ENSGT00690000101940
KO:K09267 InterPro:IPR022097 Pfam:PF12336 OMA:MHRYDMT CTD:6656
EMBL:DAAA02034934 IPI:IPI00693232 RefSeq:XP_002692040.1
RefSeq:XP_875555.1 Ensembl:ENSBTAT00000052847 GeneID:618135
KEGG:bta:618135 NextBio:20901019 Uniprot:F1MIK5
Length = 369
Score = 171 (65.3 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 91 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 123
Score = 49 (22.3 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 48 GAPAPTSASNAFPSFPLPPYFANHG-GGSHPHPLDSLSAAYPPMNMPH 94
G+ A +A+ A Y + G GG+HPH + A+ P PH
Sbjct: 184 GSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHAHHPHAHPH 231
Score = 43 (20.2 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 136 YPSVTSAQTKTFSTPPPSHLSALFQHPTAASSHP 169
YP +A + + L A QHP A +HP
Sbjct: 182 YPGSVAAAAAAAAMMQEAQL-AYGQHPGAGGAHP 214
Score = 37 (18.1 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 52 PTSASNAFPSFPLPPYFANHGGGSH 76
P +A + S LPP++ G G++
Sbjct: 339 PAAAQSRLHS--LPPHYQGAGAGAN 361
>UNIPROTKB|O57401 [details] [associations]
symbol:SOX1 "Transcription factor SOX-1" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HSSP:P48432 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 EMBL:AB011802 IPI:IPI00597708 RefSeq:NP_989664.1
UniGene:Gga.165 ProteinModelPortal:O57401 SMR:O57401 GeneID:374240
KEGG:gga:374240 CTD:6656 NextBio:20813736 Uniprot:O57401
Length = 373
Score = 171 (65.3 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 93 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 125
Score = 48 (22.0 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 18/67 (26%), Positives = 26/67 (38%)
Query: 48 GAPAPTSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYP--PMNMPHYFGSPFDAMNF 105
G+ A +A+ A Y + GGG HPH +P P M Y A+ +
Sbjct: 192 GSVAAAAAAAAMMQEAQLAYGQHPGGGGHPHHPHPHHPHHPHNPQPMHRY---DMGALQY 248
Query: 106 SKLVQGQ 112
S + Q
Sbjct: 249 SPISNSQ 255
>UNIPROTKB|Q2PG84 [details] [associations]
symbol:sox1 "Transcription factor Sox-1" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007399
"nervous system development" evidence=IMP] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0051091
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 KO:K09267 InterPro:IPR022097
Pfam:PF12336 CTD:6656 EMBL:AB219572 EMBL:EF672727 EMBL:EF192051
EMBL:BC169643 RefSeq:NP_001089143.1 UniGene:Xl.55964
ProteinModelPortal:Q2PG84 SMR:Q2PG84 GeneID:734174 KEGG:xla:734174
Xenbase:XB-GENE-1018276 Uniprot:Q2PG84
Length = 393
Score = 171 (65.3 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 79 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 111
Score = 49 (22.3 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 66 PYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQT 113
P+ +H HPH + S PP M Y A+ +S L QT
Sbjct: 219 PHHPHHHPHHHPHH-NPTSHPTPPQPMHRY---DMSALQYSPLPGAQT 262
Score = 37 (18.1 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 18/99 (18%), Positives = 33/99 (33%)
Query: 65 PPYFANHGGGSHP------HPLDSLSAAYPPMN--MPHYFGSP--FDAMNFSKLVQGQTS 114
P + +H SHP H D + Y P+ + SP + A+++S Q
Sbjct: 226 PHHHPHHNPTSHPTPPQPMHRYDMSALQYSPLPGAQTYMSASPSSYGALSYSSSQQQHQG 285
Query: 115 QADTKXXXXXXXXXXXXXXXLYPSVTSAQTKTFSTPPPS 153
+ + S+ ++ +PP S
Sbjct: 286 SPSSAAVAAAAAAASSGALGVLGSLVKSEPSV--SPPVS 322
Score = 35 (17.4 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 72 GGGSHPHP 79
GGGSH P
Sbjct: 323 GGGSHNRP 330
Score = 35 (17.4 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 73 GGSHPHPLDSLSAAYPPMNMPHY 95
GG HPH + P + PH+
Sbjct: 211 GGHHPHHHPH-HPHHHPHHHPHH 232
>UNIPROTKB|P48430 [details] [associations]
symbol:SOX2 "Transcription factor SOX-2" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0021879 "forebrain neuron differentiation" evidence=IEA]
[GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021987
"cerebral cortex development" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IEA] [GO:0030858 "positive
regulation of epithelial cell differentiation" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0032526
"response to retinoic acid" evidence=IEA] [GO:0035019 "somatic stem
cell maintenance" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IEA] [GO:0043586 "tongue
development" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0045666 "positive regulation
of neuron differentiation" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0045747
"positive regulation of Notch signaling pathway" evidence=IEA]
[GO:0046148 "pigment biosynthetic process" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0048663
"neuron fate commitment" evidence=IEA] [GO:0048852 "diencephalon
morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050910 "detection
of mechanical stimulus involved in sensory perception of sound"
evidence=IEA] [GO:0050973 "detection of mechanical stimulus
involved in equilibrioception" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0060235 "lens
induction in camera-type eye" evidence=IEA] [GO:0060441 "epithelial
tube branching involved in lung morphogenesis" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0005634
GO:GO:0001708 GO:GO:0009611 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0045665 GO:GO:0003700 GO:GO:0045747
GO:GO:0007050 GO:GO:0006351 GO:GO:0003682 GO:GO:0005667
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0032526 GO:GO:0043410
GO:GO:0090090 GO:GO:0035198 GO:GO:0050680 GO:GO:0070848
GO:GO:0030858 GO:GO:0045668 GO:GO:0046148 GO:GO:0043281
OrthoDB:EOG4MPHQV GeneTree:ENSGT00690000101940 HOGENOM:HOG000231647
KO:K09267 InterPro:IPR022097 Pfam:PF12336 HOVERGEN:HBG105663
EMBL:U12532 EMBL:D50603 EMBL:AB092842 IPI:IPI00578945 PIR:I50706
RefSeq:NP_990519.1 UniGene:Gga.601 ProteinModelPortal:P48430
SMR:P48430 STRING:P48430 Ensembl:ENSGALT00000014379 GeneID:396105
KEGG:gga:396105 CTD:6657 InParanoid:P48430 OMA:MSALQYN
NextBio:20816163 ArrayExpress:P48430 Uniprot:P48430
Length = 315
Score = 171 (65.3 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 84 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 116
Score = 40 (19.1 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 39 IPNNKSPNQGAPAPTSASNAFPSFPLP 65
+P + P AP+ S + S P+P
Sbjct: 276 LPGAEVPEPAAPSRLHMSQHYQSAPVP 302
>UNIPROTKB|A2TED3 [details] [associations]
symbol:sox1 "Transcription factor Sox-1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007399
GO:GO:0051091 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
CTD:6656 EMBL:EF192052 EMBL:BC121846 EMBL:BC159121
RefSeq:NP_001074465.1 UniGene:Str.35422 ProteinModelPortal:A2TED3
SMR:A2TED3 STRING:A2TED3 GeneID:779569 KEGG:xtr:779569
Xenbase:XB-GENE-1018269 Uniprot:A2TED3
Length = 401
Score = 171 (65.3 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 82 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 114
Score = 45 (20.9 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 13/48 (27%), Positives = 19/48 (39%)
Query: 66 PYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQT 113
P+ +H HPH + PP H + A+ +S L QT
Sbjct: 219 PHHPHHHPHHHPHHNPTPHPPPPPPQPMHRYD--MSALQYSPLPGAQT 264
Score = 38 (18.4 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 73 GGSHPHPLDSLSAAYPPMNMPHYFGSP 99
GG HPH + P + PH+ +P
Sbjct: 211 GGHHPHHHPH-HPHHHPHHHPHHNPTP 236
>UNIPROTKB|P48431 [details] [associations]
symbol:SOX2 "Transcription factor SOX-2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021984 "adenohypophysis
development" evidence=IEA] [GO:0021987 "cerebral cortex
development" evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030910 "olfactory placode
formation" evidence=IEA] [GO:0032526 "response to retinoic acid"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0043586 "tongue development" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IEA] [GO:0046148 "pigment biosynthetic process"
evidence=IEA] [GO:0048286 "lung alveolus development" evidence=IEA]
[GO:0048663 "neuron fate commitment" evidence=IEA] [GO:0048852
"diencephalon morphogenesis" evidence=IEA] [GO:0050910 "detection
of mechanical stimulus involved in sensory perception of sound"
evidence=IEA] [GO:0050973 "detection of mechanical stimulus
involved in equilibrioception" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0060235 "lens
induction in camera-type eye" evidence=IEA] [GO:0060441 "epithelial
tube branching involved in lung morphogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC;IDA;NAS] [GO:0003677 "DNA
binding" evidence=IDA;NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA;NAS] [GO:0006325 "chromatin organization"
evidence=NAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] [GO:0001654 "eye development"
evidence=IEP] [GO:0021983 "pituitary gland development"
evidence=IEP] [GO:0030900 "forebrain development" evidence=IEP]
[GO:0048839 "inner ear development" evidence=IEP] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0035019 "somatic
stem cell maintenance" evidence=IDA;IMP] [GO:0007050 "cell cycle
arrest" evidence=IDA] [GO:0043281 "regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IDA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0070848
"response to growth factor stimulus" evidence=IDA] [GO:0001649
"osteoblast differentiation" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0009611 "response to
wounding" evidence=IEP] [GO:0021781 "glial cell fate commitment"
evidence=NAS] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0097150 "neuronal stem cell maintenance" evidence=ISS]
[GO:0001714 "endodermal cell fate specification" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=TAS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0021987
GO:GO:0009611 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0007050 GO:GO:0006351
GO:GO:0003682 Orphanet:98938 GO:GO:0005667 GO:GO:0030539
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0042472 GO:GO:0032526
GO:GO:0048286 GO:GO:0050910 GO:GO:0043410 GO:GO:0045666
GO:GO:0090090 GO:GO:0035198 GO:GO:0035019 GO:GO:0001649
GO:GO:0021983 GO:GO:0048839 GO:GO:0050680 GO:GO:0070848
GO:GO:0060235 GO:GO:0030858 GO:GO:0001714 GO:GO:0045668
GO:GO:0006325 GO:GO:0046148 GO:GO:0021879 GO:GO:0021984
GO:GO:0002052 GO:GO:0048663 GO:GO:0030910 GO:GO:0001654
GO:GO:0060441 GO:GO:0043281 eggNOG:NOG321816 OrthoDB:EOG4MPHQV
GO:GO:0097150 GO:GO:0043586 GO:GO:0060042 GO:GO:0021781
Orphanet:3157 GO:GO:0048852 GO:GO:0050973 PDB:1O4X PDBsum:1O4X
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 CTD:6657 OMA:MSALQYN EMBL:Z31560 EMBL:L07335
EMBL:BC013923 IPI:IPI00009703 RefSeq:NP_003097.1 UniGene:Hs.518438
UniGene:Hs.732963 PDB:2LE4 PDBsum:2LE4 ProteinModelPortal:P48431
SMR:P48431 DIP:DIP-59913N STRING:P48431 PhosphoSite:P48431
DMDM:1351091 PRIDE:P48431 DNASU:6657 Ensembl:ENST00000325404
Ensembl:ENST00000431565 GeneID:6657 KEGG:hsa:6657 UCSC:uc003fkx.3
GeneCards:GC03P181429 HGNC:HGNC:11195 HPA:CAB010648 MIM:184429
MIM:206900 neXtProt:NX_P48431 Orphanet:77298 PharmGKB:PA36032
InParanoid:P48431 PhylomeDB:P48431 EvolutionaryTrace:P48431
GenomeRNAi:6657 NextBio:25951 Bgee:P48431 CleanEx:HS_SOX2
Genevestigator:P48431 GermOnline:ENSG00000181449 Uniprot:P48431
Length = 317
Score = 171 (65.3 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 86 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 118
Score = 39 (18.8 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 39 IPNNKSPNQGAPAPTSASNAFPSFPLP 65
+P + P AP+ S + S P+P
Sbjct: 278 LPGAEVPEPAAPSRLHMSQHYQSGPVP 304
>UNIPROTKB|O00570 [details] [associations]
symbol:SOX1 "Transcription factor SOX-1" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0002089 "lens
morphogenesis in camera-type eye" evidence=IEA] [GO:0021521
"ventral spinal cord interneuron specification" evidence=IEA]
[GO:0021884 "forebrain neuron development" evidence=IEA]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0006325 "chromatin organization" evidence=NAS]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:CH471085 GO:GO:0006325 GO:GO:0001046 eggNOG:NOG321816
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 OMA:MHRYDMT CTD:6656 EMBL:Y13436 EMBL:AL138691
IPI:IPI00012162 RefSeq:NP_005977.2 UniGene:Hs.202526
ProteinModelPortal:O00570 SMR:O00570 IntAct:O00570 STRING:O00570
PhosphoSite:O00570 PRIDE:O00570 Ensembl:ENST00000330949 GeneID:6656
KEGG:hsa:6656 UCSC:uc001vsb.1 GeneCards:GC13P112721 HGNC:HGNC:11189
MIM:602148 neXtProt:NX_O00570 PharmGKB:PA36026 InParanoid:O00570
OrthoDB:EOG4DFPQ1 PhylomeDB:O00570 GenomeRNAi:6656 NextBio:25947
Bgee:O00570 CleanEx:HS_SOX1 Genevestigator:O00570
GermOnline:ENSG00000182968 Uniprot:O00570
Length = 391
Score = 171 (65.3 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 96 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 128
Score = 44 (20.5 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 48 GAPAPTSASNAFPSFPLPPYFANHG-GGSHPHPLDSLSAAYPPMNMPH 94
G+ A +A+ A Y + G GG+HPH A+P + PH
Sbjct: 194 GSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHA----HPAHPHPHHPH 237
Score = 43 (20.2 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 136 YPSVTSAQTKTFSTPPPSHLSALFQHPTAASSHP 169
YP +A + + L A QHP A +HP
Sbjct: 192 YPGSVAAAAAAAAMMQEAQL-AYGQHPGAGGAHP 224
Score = 42 (19.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 71 HGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQ 112
H +HPHP + + P M Y A+ +S + Q
Sbjct: 225 HAHPAHPHPHHPHAHPHNPQPMHRY---DMGALQYSPISNSQ 263
>UNIPROTKB|B1PXF9 [details] [associations]
symbol:Sox2 "Sex determining region Y-box 2" species:9823
"Sus scrofa" [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0070848 "response to
growth factor stimulus" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0060235
"lens induction in camera-type eye" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0050973
"detection of mechanical stimulus involved in equilibrioception"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0046148
"pigment biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IEA] [GO:0021879 "forebrain neuron differentiation"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0021987
GO:GO:0009611 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0007050 GO:GO:0003682
GO:GO:0005667 GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042472 GO:GO:0032526 GO:GO:0048286 GO:GO:0050910
GO:GO:0043410 GO:GO:0045666 GO:GO:0090090 GO:GO:0035198
GO:GO:0035019 GO:GO:0001649 GO:GO:0050680 GO:GO:0070848
GO:GO:0060235 GO:GO:0030858 GO:GO:0001714 GO:GO:0045668
GO:GO:0046148 GO:GO:0021879 GO:GO:0021984 GO:GO:0002052
GO:GO:0048663 GO:GO:0030910 GO:GO:0060441 GO:GO:0043281
eggNOG:NOG321816 OrthoDB:EOG4MPHQV GeneTree:ENSGT00690000101940
GO:GO:0043586 GO:GO:0060042 GO:GO:0048852 GO:GO:0050973
HOGENOM:HOG000231647 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 OMA:MSALQYN EMBL:CU914271 EMBL:EU503117
UniGene:Ssc.42849 ProteinModelPortal:B1PXF9 SMR:B1PXF9
STRING:B1PXF9 Ensembl:ENSSSCT00000012883 Uniprot:B1PXF9
Length = 319
Score = 171 (65.3 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 120
Score = 39 (18.8 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 39 IPNNKSPNQGAPAPTSASNAFPSFPLP 65
+P + P AP+ S + S P+P
Sbjct: 280 LPGAEVPEPAAPSRLHMSQHYQSGPVP 306
>UNIPROTKB|A2VDX8 [details] [associations]
symbol:SOX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0070848 "response to growth
factor stimulus" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0060235
"lens induction in camera-type eye" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0050973
"detection of mechanical stimulus involved in equilibrioception"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0046148
"pigment biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IEA] [GO:0021879 "forebrain neuron differentiation"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0021987
GO:GO:0009611 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0007050 GO:GO:0003682
GO:GO:0005667 GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042472 GO:GO:0032526 GO:GO:0048286 GO:GO:0050910
GO:GO:0043410 GO:GO:0045666 GO:GO:0090090 GO:GO:0035198
GO:GO:0035019 GO:GO:0001649 GO:GO:0050680 GO:GO:0070848
GO:GO:0060235 GO:GO:0030858 GO:GO:0001714 GO:GO:0045668
GO:GO:0046148 GO:GO:0021879 GO:GO:0021984 GO:GO:0002052
GO:GO:0048663 GO:GO:0030910 GO:GO:0060441 GO:GO:0043281
eggNOG:NOG321816 OrthoDB:EOG4MPHQV GeneTree:ENSGT00690000101940
GO:GO:0043586 GO:GO:0060042 GO:GO:0048852 GO:GO:0050973
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 CTD:6657 OMA:MSALQYN EMBL:DAAA02001921
EMBL:BC133458 IPI:IPI00701823 RefSeq:NP_001098933.1
UniGene:Bt.103364 SMR:A2VDX8 STRING:A2VDX8
Ensembl:ENSBTAT00000015411 GeneID:784383 KEGG:bta:784383
InParanoid:A2VDX8 NextBio:20926664 Uniprot:A2VDX8
Length = 320
Score = 171 (65.3 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 89 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 121
Score = 39 (18.8 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 39 IPNNKSPNQGAPAPTSASNAFPSFPLP 65
+P + P AP+ S + S P+P
Sbjct: 281 LPGAEVPEPAAPSRLHMSQHYQSGPVP 307
>UNIPROTKB|P54231 [details] [associations]
symbol:SOX2 "Transcription factor SOX-2" species:9940 "Ovis
aries" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISS] [GO:0045665 "negative
regulation of neuron differentiation" evidence=ISS] [GO:0097150
"neuronal stem cell maintenance" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0045665 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0097150 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 EMBL:X96997
ProteinModelPortal:P54231 SMR:P54231 Uniprot:P54231
Length = 320
Score = 171 (65.3 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 89 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 121
Score = 39 (18.8 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 39 IPNNKSPNQGAPAPTSASNAFPSFPLP 65
+P + P AP+ S + S P+P
Sbjct: 281 LPGAEVPEPAAPSRLHMSQHYQSGPVP 307
>UNIPROTKB|E2R1W3 [details] [associations]
symbol:SOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0070848 "response to
growth factor stimulus" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0060235
"lens induction in camera-type eye" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0050973
"detection of mechanical stimulus involved in equilibrioception"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0046148
"pigment biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IEA] [GO:0021879 "forebrain neuron differentiation"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0021987
GO:GO:0009611 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0007050 GO:GO:0003682
GO:GO:0005667 GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042472 GO:GO:0032526 GO:GO:0048286 GO:GO:0050910
GO:GO:0043410 GO:GO:0045666 GO:GO:0090090 GO:GO:0035198
GO:GO:0035019 GO:GO:0001649 GO:GO:0050680 GO:GO:0070848
GO:GO:0060235 GO:GO:0030858 GO:GO:0001714 GO:GO:0045668
GO:GO:0046148 GO:GO:0021879 GO:GO:0021984 GO:GO:0002052
GO:GO:0048663 GO:GO:0030910 GO:GO:0060441 GO:GO:0043281
GeneTree:ENSGT00690000101940 GO:GO:0043586 GO:GO:0060042
GO:GO:0048852 GO:GO:0050973 KO:K09267 InterPro:IPR022097
Pfam:PF12336 CTD:6657 OMA:MSALQYN EMBL:AAEX03017262
RefSeq:XP_545216.3 Ensembl:ENSCAFT00000018476 GeneID:488092
KEGG:cfa:488092 NextBio:20861523 Uniprot:E2R1W3
Length = 324
Score = 171 (65.3 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 93 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 125
Score = 39 (18.8 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 39 IPNNKSPNQGAPAPTSASNAFPSFPLP 65
+P + P AP+ S + S P+P
Sbjct: 285 LPGAEVPEPAAPSRLHMSQHYQSGPVP 311
>FB|FBgn0036411 [details] [associations]
symbol:Sox21a "Sox21a" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0006911 EMBL:AE014296
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101940 OrthoDB:EOG4HHMJQ HSSP:P48432
eggNOG:NOG302715 KO:K09267 CTD:30543 EMBL:BT022137
RefSeq:NP_648694.1 UniGene:Dm.24001 SMR:Q9VUD1
EnsemblMetazoa:FBtr0075748 GeneID:39567 KEGG:dme:Dmel_CG7345
UCSC:CG7345-RA FlyBase:FBgn0036411 InParanoid:Q9VUD1 OMA:PWRYLPL
GenomeRNAi:39567 NextBio:814309 Uniprot:Q9VUD1
Length = 388
Score = 193 (73.0 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 49/102 (48%), Positives = 56/102 (54%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS-IPNNKSPNQGAPAP--TSASNA 58
+KRPFIDEAKRLRA+HMKEHPDYKYRPRRKPKT +S +P G A +A A
Sbjct: 166 QKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNKSPVPGGGGGGGGGGANGGVNAGGA 225
Query: 59 FPSFPLPPYFANHGGGSHPHPLDSLSAAYP-PMNMPHYFGSP 99
S P P GS P D P ++PH G P
Sbjct: 226 GNSGPSGP-------GSVGSPKDMQPQLSPLGQSLPHLHGHP 260
>MGI|MGI:98364 [details] [associations]
symbol:Sox2 "SRY-box containing gene 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISO] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0001649 "osteoblast differentiation" evidence=ISO] [GO:0001708
"cell fate specification" evidence=IMP] [GO:0001714 "endodermal
cell fate specification" evidence=ISO] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=ISO;IGI;IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC;ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007050 "cell cycle arrest" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IMP] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0010468
"regulation of gene expression" evidence=ISO] [GO:0019827 "stem
cell maintenance" evidence=IMP] [GO:0021879 "forebrain neuron
differentiation" evidence=IMP] [GO:0021984 "adenohypophysis
development" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IGI] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0030858 "positive
regulation of epithelial cell differentiation" evidence=IDA]
[GO:0030910 "olfactory placode formation" evidence=IGI] [GO:0032526
"response to retinoic acid" evidence=IDA] [GO:0035019 "somatic stem
cell maintenance" evidence=ISO] [GO:0035198 "miRNA binding"
evidence=ISO] [GO:0042221 "response to chemical stimulus"
evidence=IDA] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0043586
"tongue development" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045165 "cell
fate commitment" evidence=IDA] [GO:0045596 "negative regulation of
cell differentiation" evidence=IMP] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IMP]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IDA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0046148 "pigment biosynthetic
process" evidence=IMP] [GO:0048286 "lung alveolus development"
evidence=IDA] [GO:0048568 "embryonic organ development"
evidence=IMP] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=IMP] [GO:0048663 "neuron fate
commitment" evidence=IMP] [GO:0048852 "diencephalon morphogenesis"
evidence=IMP] [GO:0048863 "stem cell differentiation" evidence=IDA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=ISO] [GO:0050767 "regulation of neurogenesis"
evidence=IGI] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IMP] [GO:0050973
"detection of mechanical stimulus involved in equilibrioception"
evidence=IMP] [GO:0060042 "retina morphogenesis in camera-type eye"
evidence=IMP] [GO:0060235 "lens induction in camera-type eye"
evidence=IGI] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IDA] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISO;IDA]
[GO:0097150 "neuronal stem cell maintenance" evidence=IGI]
InterPro:IPR009071 MGI:MGI:98364 Pfam:PF00505 GO:GO:0005737
GO:GO:0021987 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042472 GO:GO:0032526 GO:GO:0048286 GO:GO:0050910
GO:GO:0045666 GO:GO:0090090 GO:GO:0060235 GO:GO:0030858
GO:GO:0001714 GO:GO:0045668 GO:GO:0046148 GO:GO:0021879
GO:GO:0021984 GO:GO:0002052 GO:GO:0048663 GO:GO:0030910
GO:GO:0060441 eggNOG:NOG321816 OrthoDB:EOG4MPHQV GO:GO:0097150
GO:GO:0043586 GO:GO:0060042 GO:GO:0048852 GO:GO:0050973 PDB:1GT0
PDBsum:1GT0 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 CTD:6657 EMBL:U31967 EMBL:X94127
IPI:IPI00319017 PIR:S10949 RefSeq:NP_035573.3 UniGene:Mm.65396
ProteinModelPortal:P48432 SMR:P48432 DIP:DIP-54522N IntAct:P48432
STRING:P48432 PhosphoSite:P48432 PRIDE:P48432 GeneID:20674
KEGG:mmu:20674 InParanoid:P48432 EvolutionaryTrace:P48432
NextBio:299161 CleanEx:MM_SOX2 Genevestigator:P48432
GermOnline:ENSMUSG00000074637 Uniprot:P48432
Length = 319
Score = 171 (65.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 120
Score = 36 (17.7 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 39 IPNNKSPNQGAPAPTSASNAFPSFPLP 65
+P + P AP+ + + S P+P
Sbjct: 280 LPGAEVPEPAAPSRLHMAQHYQSGPVP 306
>RGD|1565646 [details] [associations]
symbol:Sox2 "SRY (sex determining region Y)-box 2" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IDA] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001649 "osteoblast differentiation"
evidence=IEA;ISO] [GO:0001654 "eye development" evidence=ISO]
[GO:0001708 "cell fate specification" evidence=ISO] [GO:0001714
"endodermal cell fate specification" evidence=IEA;ISO] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007050 "cell cycle
arrest" evidence=IEA;ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009611 "response to wounding" evidence=IEA;ISO] [GO:0010468
"regulation of gene expression" evidence=ISO] [GO:0019827 "stem
cell maintenance" evidence=ISO] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA;ISO] [GO:0021983 "pituitary gland
development" evidence=ISO] [GO:0021984 "adenohypophysis
development" evidence=IEA;ISO] [GO:0021987 "cerebral cortex
development" evidence=IEA;ISO] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=ISO] [GO:0030539 "male
genitalia development" evidence=IEA;ISO] [GO:0030858 "positive
regulation of epithelial cell differentiation" evidence=IEA;ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030910
"olfactory placode formation" evidence=IEA;ISO] [GO:0032526
"response to retinoic acid" evidence=IEA;ISO] [GO:0035019 "somatic
stem cell maintenance" evidence=IEA;ISO] [GO:0035198 "miRNA
binding" evidence=IEA;ISO] [GO:0042221 "response to chemical
stimulus" evidence=ISO] [GO:0042472 "inner ear morphogenesis"
evidence=IEA;ISO] [GO:0043281 "regulation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0043586 "tongue development" evidence=IEA;ISO]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0045165 "cell fate commitment" evidence=ISO]
[GO:0045596 "negative regulation of cell differentiation"
evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0045666 "positive regulation
of neuron differentiation" evidence=IEA;ISO] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA;ISO]
[GO:0045747 "positive regulation of Notch signaling pathway"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0046148 "pigment biosynthetic process"
evidence=IEA;ISO] [GO:0048286 "lung alveolus development"
evidence=IEA;ISO] [GO:0048568 "embryonic organ development"
evidence=ISO] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=ISO] [GO:0048663 "neuron fate
commitment" evidence=IEA;ISO] [GO:0048839 "inner ear development"
evidence=ISO] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA;ISO] [GO:0048863 "stem cell differentiation"
evidence=ISO] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IEA;ISO] [GO:0050767 "regulation of
neurogenesis" evidence=ISO] [GO:0050910 "detection of mechanical
stimulus involved in sensory perception of sound" evidence=IEA;ISO]
[GO:0050973 "detection of mechanical stimulus involved in
equilibrioception" evidence=IEA;ISO] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA;ISO] [GO:0060235
"lens induction in camera-type eye" evidence=IEA;ISO] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IEA;ISO] [GO:0070848 "response to growth factor stimulus"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:0097150 "neuronal
stem cell maintenance" evidence=ISO] InterPro:IPR009071
Pfam:PF00505 RGD:1565646 GO:GO:0005829 GO:GO:0005634 GO:GO:0021987
GO:GO:0009611 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
GO:GO:0045747 GO:GO:0007050 GO:GO:0003682 GO:GO:0005667
GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0042472 GO:GO:0032526
GO:GO:0048286 GO:GO:0050910 GO:GO:0043410 GO:GO:0045666
GO:GO:0090090 GO:GO:0035198 GO:GO:0035019 GO:GO:0001649
GO:GO:0000976 GO:GO:0050680 GO:GO:0070848 GO:GO:0060235
GO:GO:0030858 GO:GO:0001714 GO:GO:0045668 GO:GO:0046148
GO:GO:0021879 GO:GO:0021984 GO:GO:0002052 GO:GO:0048663
GO:GO:0030910 GO:GO:0060441 GO:GO:0043281 EMBL:CH473961
OrthoDB:EOG4MPHQV GeneTree:ENSGT00690000101940 GO:GO:0043586
GO:GO:0060042 GO:GO:0048852 GO:GO:0050973 KO:K09267
InterPro:IPR022097 Pfam:PF12336 CTD:6657 OMA:MSALQYN
IPI:IPI00215605 RefSeq:NP_001102651.1 UniGene:Rn.17369 SMR:D4A543
Ensembl:ENSRNOT00000016236 GeneID:499593 KEGG:rno:499593
UCSC:RGD:1565646 NextBio:703377 Uniprot:D4A543
Length = 319
Score = 171 (65.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 88 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 120
Score = 36 (17.7 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 39 IPNNKSPNQGAPAPTSASNAFPSFPLP 65
+P + P AP+ + + S P+P
Sbjct: 280 LPGAEVPEPAAPSRLHMAQHYQSGPVP 306
>MGI|MGI:98365 [details] [associations]
symbol:Sox3 "SRY-box containing gene 3" species:10090 "Mus
musculus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IDA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007423 "sensory organ development"
evidence=IMP] [GO:0007530 "sex determination" evidence=ISO;IMP]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0021854
"hypothalamus development" evidence=IMP] [GO:0021983 "pituitary
gland development" evidence=IMP] [GO:0030900 "forebrain
development" evidence=IMP] [GO:0048515 "spermatid differentiation"
evidence=IMP] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR009071 MGI:MGI:98365 Pfam:PF00505 GO:GO:0005634
GO:GO:0007423 GO:GO:0045665 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009
GO:GO:0060324 GO:GO:0021983 GO:GO:0000979 GO:GO:0001106
GO:GO:0021854 GO:GO:0048515 eggNOG:NOG321816 GO:GO:0007530
HOGENOM:HOG000231647 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 EMBL:X94125 EMBL:AF434675 EMBL:AB108674
IPI:IPI00986516 PIR:S10948 UniGene:Mm.35784
ProteinModelPortal:P53784 SMR:P53784 STRING:P53784
PhosphoSite:P53784 PRIDE:P53784 InParanoid:Q80XF1 ChiTaRS:SOX3
Bgee:P53784 CleanEx:MM_SOX3 Genevestigator:P53784
GermOnline:ENSMUSG00000045179 Uniprot:P53784
Length = 375
Score = 176 (67.0 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 49/106 (46%), Positives = 59/106 (55%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT----PGQSIPNNK-SPNQGAPAPTSAS 56
EKRPFIDEAKRLRA+HMKE+PDYKYRPRRK KT S+P P A A +A+
Sbjct: 114 EKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAAAAAAAA 173
Query: 57 NAFPSFP------LPPYFANHGGGSHPHPL--DSLSAAYPP-MNMP 93
A S P L Y +G + + L + L A PP M+ P
Sbjct: 174 AAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPPSMSSP 219
Score = 34 (17.0 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 142 AQTKTFSTPPP 152
AQ + S+PPP
Sbjct: 211 AQPPSMSSPPP 221
>UNIPROTKB|E2R3H4 [details] [associations]
symbol:SOX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048627
"myoblast development" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045843 "negative regulation of striated muscle
tissue development" evidence=IEA] [GO:0043403 "skeletal muscle
tissue regeneration" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
GO:GO:0043403 GO:GO:0048627 CTD:6665 KO:K09271 OMA:PQSDPRL
EMBL:AAEX03003621 RefSeq:XP_003434661.1 ProteinModelPortal:E2R3H4
Ensembl:ENSCAFT00000026387 GeneID:100688349 KEGG:cfa:100688349
Uniprot:E2R3H4
Length = 233
Score = 153 (58.9 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 26/40 (65%), Positives = 34/40 (85%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN 41
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G P+
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKSSGAGPPH 133
Score = 44 (20.5 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 35 PGQSIPNNKSPNQGAPAPTSASNAFPSFPLPPYFANHGGGSHPHPLDS-LSAAYPPMNMP 93
PG ++ P +P SN L P+F+ + P P ++ LS A PM +
Sbjct: 174 PGGYGSSHCKPEASSPCSLPQSNPRLQGELLPHFSPYLPPGSPTPYNAPLSGA--PMPLT 231
Query: 94 H 94
H
Sbjct: 232 H 232
Score = 38 (18.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 65 PPYFANHGGG 74
PP+F GGG
Sbjct: 131 PPHFGQGGGG 140
>UNIPROTKB|E2R800 [details] [associations]
symbol:SOX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060324 "face development" evidence=IEA]
[GO:0060009 "Sertoli cell development" evidence=IEA] [GO:0048515
"spermatid differentiation" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0007530 "sex determination" evidence=IEA]
[GO:0007423 "sensory organ development" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0007423 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009
GO:GO:0060324 GO:GO:0021983 GO:GO:0000979 GO:GO:0001106
GO:GO:0021854 GO:GO:0048515 GeneTree:ENSGT00690000101940
GO:GO:0007530 KO:K09267 InterPro:IPR022097 Pfam:PF12336 CTD:6658
OMA:AQSYMNV EMBL:AAEX03026974 RefSeq:XP_852934.1
Ensembl:ENSCAFT00000030220 GeneID:492178 KEGG:cfa:492178
NextBio:20864806 Uniprot:E2R800
Length = 444
Score = 173 (66.0 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 39/68 (57%), Positives = 45/68 (66%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT----PGQSIPNNK-SPNQGAPAPTSAS 56
EKRPFIDEAKRLRA+HMKE+PDYKYRPRRK KT S+P P A A +A+
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAAAAAAAA 243
Query: 57 NAFPSFPL 64
A S P+
Sbjct: 244 AAAASSPV 251
Score = 38 (18.4 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 142 AQTKTFSTPPP 152
AQ T S+PPP
Sbjct: 281 AQPATMSSPPP 291
>UNIPROTKB|I3LG51 [details] [associations]
symbol:LOC100623770 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0060324 "face development" evidence=IEA]
[GO:0060009 "Sertoli cell development" evidence=IEA] [GO:0048515
"spermatid differentiation" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0007530 "sex determination" evidence=IEA]
[GO:0007423 "sensory organ development" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0007423 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009
GO:GO:0060324 GO:GO:0021983 GO:GO:0000979 GO:GO:0001106
GO:GO:0021854 GO:GO:0048515 GeneTree:ENSGT00690000101940
GO:GO:0007530 KO:K09267 InterPro:IPR022097 Pfam:PF12336 OMA:PDPPAHR
EMBL:CU856631 RefSeq:XP_003360512.1 Ensembl:ENSSSCT00000024126
GeneID:100623770 KEGG:ssc:100623770 Uniprot:I3LG51
Length = 448
Score = 173 (66.0 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 39/68 (57%), Positives = 45/68 (66%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT----PGQSIPNNK-SPNQGAPAPTSAS 56
EKRPFIDEAKRLRA+HMKE+PDYKYRPRRK KT S+P P A A +A+
Sbjct: 187 EKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAAAAAAAA 246
Query: 57 NAFPSFPL 64
A S P+
Sbjct: 247 AAAASSPV 254
Score = 38 (18.4 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 142 AQTKTFSTPPP 152
AQ T S+PPP
Sbjct: 284 AQPATMSSPPP 294
>UNIPROTKB|Q9W7R5 [details] [associations]
symbol:SOX21 "Transcription factor SOX-21" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043565 GO:GO:0006351 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HOVERGEN:HBG105618 InterPro:IPR022097 Pfam:PF12336 EMBL:AB026623
IPI:IPI00574367 ProteinModelPortal:Q9W7R5 SMR:Q9W7R5 STRING:Q9W7R5
Uniprot:Q9W7R5
Length = 280
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>UNIPROTKB|E1BHN5 [details] [associations]
symbol:LOC614121 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001942
"hair follicle development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0043588 GO:GO:0003677 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001942 GeneTree:ENSGT00690000101940
InterPro:IPR022097 Pfam:PF12336 OMA:KPKTLMK EMBL:DAAA02034004
EMBL:DAAA02034005 IPI:IPI00694817 Ensembl:ENSBTAT00000030439
Uniprot:E1BHN5
Length = 204
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 53 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 85
>WB|WBGene00004950 [details] [associations]
symbol:sox-3 species:6239 "Caenorhabditis elegans"
[GO:0003690 "double-stranded DNA binding" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003690
GeneTree:ENSGT00690000101940 EMBL:Z69792 HSSP:P48432
eggNOG:NOG302715 KO:K09267 PIR:T22022 RefSeq:NP_510439.1
UniGene:Cel.1041 ProteinModelPortal:Q20201 SMR:Q20201
EnsemblMetazoa:F40E10.2 GeneID:185534 KEGG:cel:CELE_F40E10.2
UCSC:F40E10.2 CTD:185534 WormBase:F40E10.2 HOGENOM:HOG000018340
InParanoid:Q20201 OMA:KTSYDED NextBio:928610 Uniprot:Q20201
Length = 212
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 47/119 (39%), Positives = 64/119 (53%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT------PGQSIPNNKSPNQGAPAPTSA 55
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRKPK+ P +I P Q ++A
Sbjct: 93 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKSSNLKQQPRLNIAMPTIPPQSLFNYSTA 152
Query: 56 SNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQTS 114
++ + L Y+++ P+ S + Y P NM + A+ + V T+
Sbjct: 153 FDSLKTHDLSQYYSSF----FQSPVLS-GSTYAPYNMMAAYARQAAAVAAASQVSASTT 206
>UNIPROTKB|P41225 [details] [associations]
symbol:SOX3 "Transcription factor SOX-3" species:9606 "Homo
sapiens" [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0048515 "spermatid differentiation" evidence=IEA] [GO:0060009
"Sertoli cell development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISS] [GO:0060324 "face development"
evidence=ISS] [GO:0007423 "sensory organ development" evidence=ISS]
[GO:0021983 "pituitary gland development" evidence=ISS] [GO:0021854
"hypothalamus development" evidence=ISS] [GO:0007530 "sex
determination" evidence=IMP] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007417
"central nervous system development" evidence=TAS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007423
GO:GO:0045665 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009 GO:GO:0060324
GO:GO:0021983 GO:GO:0000979 GO:GO:0001106 GO:GO:0021854
GO:GO:0048515 eggNOG:NOG321816 GO:GO:0007530 Orphanet:3157
Orphanet:90695 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 CTD:6658 EMBL:X71135 EMBL:AF264713
EMBL:AL121875 EMBL:BC093863 EMBL:BC093865 EMBL:X65665
IPI:IPI00240510 PIR:I38239 PIR:S22942 RefSeq:NP_005625.2
UniGene:Hs.157429 ProteinModelPortal:P41225 SMR:P41225
STRING:P41225 PhosphoSite:P41225 DMDM:48429228 PRIDE:P41225
Ensembl:ENST00000370536 GeneID:6658 KEGG:hsa:6658 UCSC:uc004fbd.1
GeneCards:GC0XM139585 HGNC:HGNC:11199 MIM:300123 MIM:300833
MIM:312000 MIM:313430 neXtProt:NX_P41225 Orphanet:79495
Orphanet:67045 PharmGKB:PA36036 InParanoid:P41225 OMA:AQSYMNV
PhylomeDB:P41225 GenomeRNAi:6658 NextBio:25955 Bgee:P41225
CleanEx:HS_SOX3 Genevestigator:P41225 GermOnline:ENSG00000134595
Uniprot:P41225
Length = 446
Score = 172 (65.6 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 38/61 (62%), Positives = 44/61 (72%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT----PGQSIPNNKSPNQGAPAPTSASN 57
EKRPFIDEAKRLRA+HMKE+PDYKYRPRRK KT S+P+ P GA A +A+
Sbjct: 184 EKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPSGLLP-PGAAAAAAAAA 242
Query: 58 A 58
A
Sbjct: 243 A 243
Score = 34 (17.0 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 142 AQTKTFSTPPP 152
AQ + S+PPP
Sbjct: 282 AQPPSMSSPPP 292
>FB|FBgn0042630 [details] [associations]
symbol:Sox21b "Sox21b" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0008301 "DNA
binding, bending" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 EMBL:AE014296 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101940 OrthoDB:EOG4HHMJQ HSSP:P48432
CTD:406246 EMBL:AY058313 RefSeq:NP_648695.1 UniGene:Dm.955
SMR:Q9VUD3 IntAct:Q9VUD3 MINT:MINT-324417 STRING:Q9VUD3
EnsemblMetazoa:FBtr0075747 EnsemblMetazoa:FBtr0330115 GeneID:39569
KEGG:dme:Dmel_CG32139 UCSC:CG32139-RA FlyBase:FBgn0042630
InParanoid:Q9VUD3 OMA:NEEHIKR GenomeRNAi:39569 NextBio:814314
Uniprot:Q9VUD3
Length = 571
Score = 187 (70.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 41/76 (53%), Positives = 45/76 (59%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK + P P + P
Sbjct: 293 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRRDGYPYPMPYPSVPVEALRAGITPG 352
Query: 62 FPLP-PYFANHGGGSH 76
+ P P A + GSH
Sbjct: 353 YFAPGPTAAAYHLGSH 368
>WB|WBGene00004949 [details] [associations]
symbol:sox-2 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0010171 GO:GO:0040011
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0040035 eggNOG:NOG321816 GeneTree:ENSGT00690000101940
HSSP:P48432 KO:K09267 EMBL:FO080256 PIR:T16581 RefSeq:NP_741836.1
ProteinModelPortal:Q21305 SMR:Q21305 STRING:Q21305 PaxDb:Q21305
PRIDE:Q21305 EnsemblMetazoa:K08A8.2a.1 EnsemblMetazoa:K08A8.2a.2
GeneID:181002 KEGG:cel:CELE_K08A8.2 UCSC:K08A8.2a.1 CTD:181002
WormBase:K08A8.2a HOGENOM:HOG000020950 InParanoid:Q21305
OMA:AQNIQNA NextBio:911930 ArrayExpress:Q21305 Uniprot:Q21305
Length = 283
Score = 178 (67.7 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 41/63 (65%), Positives = 45/63 (71%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPT-SASNAFP 60
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK K SI N K+ GAP P + P
Sbjct: 105 EKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTK----SI-NKKN---GAPIPFGNLDTKTP 156
Query: 61 SFP 63
S+P
Sbjct: 157 SYP 159
>UNIPROTKB|F2Z520 [details] [associations]
symbol:SOX21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001942
"hair follicle development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0043588 GO:GO:0003677 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001942 GeneTree:ENSGT00690000101940
InterPro:IPR022097 Pfam:PF12336 EMBL:CU633813
Ensembl:ENSSSCT00000010410 Uniprot:F2Z520
Length = 416
Score = 182 (69.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 33/33 (100%), Positives = 33/33 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT
Sbjct: 204 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 236
>UNIPROTKB|Q9PSV6 [details] [associations]
symbol:Sox3 "SOX3" species:9031 "Gallus gallus" [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0007423 "sensory organ
development" evidence=IEA] [GO:0007530 "sex determination"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0021854 "hypothalamus development" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0048515 "spermatid
differentiation" evidence=IEA] [GO:0060009 "Sertoli cell
development" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000979
GO:GO:0001106 UniGene:Gga.3795 GeneTree:ENSGT00690000101940
HSSP:P48432 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 CTD:6658 OMA:AQSYMNV
EMBL:AADN02013475 EMBL:AB011803 EMBL:AB753847 IPI:IPI00820761
RefSeq:NP_989526.1 SMR:Q9PSV6 STRING:Q9PSV6
Ensembl:ENSGALT00000011718 GeneID:374019 KEGG:gga:374019
InParanoid:Q9PSV6 NextBio:20813546 Uniprot:Q9PSV6
Length = 316
Score = 178 (67.7 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 56/165 (33%), Positives = 73/165 (44%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT----PGQSIPNNKSPNQGAPAPTSASN 57
EKRPFIDEAKRLRA+HMKE+PDYKYRPRRK KT S+P N G A +S
Sbjct: 93 EKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGNLLAPGGGNAVSSPVG 152
Query: 58 AFPSFPLPPYFANHGGGSHPHPLDSLS-AAYPPMNMP-----HYFGSPFDAMNFSKLVQ- 110
+ G++ D L +P MN P H + P + +S ++
Sbjct: 153 VGQRIDTYAHMNGWTNGAYSLMQDQLGYGQHPGMNSPQLQQMHRYDMP--GLQYSPMMST 210
Query: 111 GQT--SQADTKXXXXXXXXXXXXXXXLYPSVTSAQTKTFSTPPPS 153
QT + A T S+ S S+PPP+
Sbjct: 211 AQTYMNAASTYSMSPAAYGQQPSTAMSLGSMGSVVKSEPSSPPPA 255
>UNIPROTKB|O95416 [details] [associations]
symbol:SOX14 "Transcription factor SOX-14" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007399
"nervous system development" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0007399 EMBL:CH471052 GO:GO:0043565 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 CTD:8403 eggNOG:NOG302715 HOGENOM:HOG000231647
HOVERGEN:HBG105618 KO:K09267 OrthoDB:EOG47D9H0 InterPro:IPR022097
Pfam:PF12336 OMA:LGCPSQH EMBL:AF107043 EMBL:AJ006230 EMBL:AF193436
EMBL:AK314127 EMBL:BC106729 EMBL:BC106730 EMBL:AF032451
IPI:IPI00030676 RefSeq:NP_004180.1 UniGene:Hs.248184
ProteinModelPortal:O95416 SMR:O95416 STRING:O95416
PhosphoSite:O95416 PRIDE:O95416 Ensembl:ENST00000306087 GeneID:8403
KEGG:hsa:8403 UCSC:uc003erm.2 GeneCards:GC03P137483 HGNC:HGNC:11193
MIM:604747 neXtProt:NX_O95416 PharmGKB:PA36030 InParanoid:O95416
PhylomeDB:O95416 GenomeRNAi:8403 NextBio:31446 Bgee:O95416
CleanEx:HS_SOX14 Genevestigator:O95416 GermOnline:ENSG00000168875
Uniprot:O95416
Length = 240
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 49/108 (45%), Positives = 58/108 (53%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS------IP--NNKSPNQGAPAPT 53
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK + +P + P + A P
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDPLKAAGLPV 112
Query: 54 SASNAFPSFP------LPPYFANHGGGSHPHPLDSLSAAYPPMN-MPH 94
AS+ S P LPP A + S P S+A M +PH
Sbjct: 113 GASDGLLSAPEKARAFLPPASAPY---SLLDPAQFSSSAIQKMGEVPH 157
>UNIPROTKB|P61259 [details] [associations]
symbol:SOX14 "Transcription factor SOX-14" species:9541
"Macaca fascicularis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG105618
InterPro:IPR022097 Pfam:PF12336 EMBL:AB063098
ProteinModelPortal:P61259 SMR:P61259 Uniprot:P61259
Length = 240
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 49/108 (45%), Positives = 58/108 (53%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS------IP--NNKSPNQGAPAPT 53
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK + +P + P + A P
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDPLKAAGLPV 112
Query: 54 SASNAFPSFP------LPPYFANHGGGSHPHPLDSLSAAYPPMN-MPH 94
AS+ S P LPP A + S P S+A M +PH
Sbjct: 113 GASDGLLSAPEKARAFLPPASAPY---SLLDPAQFSSSAIQKMGEVPH 157
>MGI|MGI:98362 [details] [associations]
symbol:Sox14 "SRY-box containing gene 14" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR009071
MGI:MGI:98362 Pfam:PF00505 GO:GO:0005634 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 CTD:8403 eggNOG:NOG302715
HOVERGEN:HBG105618 KO:K09267 OrthoDB:EOG47D9H0 OMA:LGCPSQH
EMBL:AF193437 EMBL:AF193435 EMBL:AF182357 EMBL:Z18963
IPI:IPI00929882 PIR:S30244 RefSeq:NP_035570.1 UniGene:Mm.261595
UniGene:Mm.484077 ProteinModelPortal:Q04892 SMR:Q04892
STRING:Q04892 PhosphoSite:Q04892 PRIDE:Q04892
Ensembl:ENSMUST00000054819 GeneID:20669 KEGG:mmu:20669
InParanoid:Q04892 NextBio:299141 Bgee:Q04892 CleanEx:MM_SOX14
Genevestigator:Q04892 Uniprot:Q04892
Length = 240
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 49/108 (45%), Positives = 58/108 (53%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS------IP--NNKSPNQGAPAPT 53
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK + +P + P + A P
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDPLKAAGLPV 112
Query: 54 SASNAFPSFP------LPPYFANHGGGSHPHPLDSLSAAYPPMN-MPH 94
AS+ S P LPP A + S P S+A M +PH
Sbjct: 113 GASDGLLSAPEKARAFLPPASAPY---SLLDPAQFSSSAIQKMGEVPH 157
>RGD|1309654 [details] [associations]
symbol:Sox14 "SRY (sex determining region Y)-box 14"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR009071
Pfam:PF00505 RGD:1309654 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:CH473954 CTD:8403
HOVERGEN:HBG105618 KO:K09267 OMA:LGCPSQH EMBL:EU853677
IPI:IPI00870866 RefSeq:NP_001100320.1 UniGene:Rn.141574 SMR:B7SZV3
GeneID:300954 KEGG:rno:300954 UCSC:RGD:1309654 NextBio:647780
Genevestigator:B7SZV3 Uniprot:B7SZV3
Length = 240
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 49/108 (45%), Positives = 58/108 (53%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS------IP--NNKSPNQGAPAPT 53
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK + +P + P + A P
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDPLKAAGLPV 112
Query: 54 SASNAFPSFP------LPPYFANHGGGSHPHPLDSLSAAYPPMN-MPH 94
AS+ S P LPP A + S P S+A M +PH
Sbjct: 113 GASDGLLSAPEKARAFLPPASAPY---SLLDPAQFSSSAIQKMGEVPH 157
>FB|FBgn0005613 [details] [associations]
symbol:Sox15 "Sox box protein 15" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0022416 "chaeta development" evidence=IGI;IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IGI] InterPro:IPR009071 Pfam:PF00505
EMBL:AE013599 GO:GO:0005634 GO:GO:0043066 GO:GO:0008285
GO:GO:0003677 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0022416
GO:GO:0035220 eggNOG:NOG242943 GeneTree:ENSGT00670000097649
EMBL:AJ250955 EMBL:BT022122 EMBL:BT025204 EMBL:X65668 PIR:S22936
RefSeq:NP_523739.2 UniGene:Dm.2578 ProteinModelPortal:P40657
SMR:P40657 DIP:DIP-21090N MINT:MINT-990874 STRING:P40657
PRIDE:P40657 EnsemblMetazoa:FBtr0087576 GeneID:36575
KEGG:dme:Dmel_CG8404 CTD:6665 FlyBase:FBgn0005613 InParanoid:P40657
OMA:KESRIRR OrthoDB:EOG4MCVFC PhylomeDB:P40657 GenomeRNAi:36575
NextBio:799285 Bgee:P40657 GermOnline:CG8404 Uniprot:P40657
Length = 784
Score = 160 (61.4 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSI-PNNKSPNQGAPAP-TSASNAF 59
++RP+++EA+RLR +HM EHP+YKYRPRR+ ++ +++ P K ++ +P P T S +
Sbjct: 260 DRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSN 319
Query: 60 PSFPLPPYFANHGGGSHPHPLD 81
P PP S+ P D
Sbjct: 320 PKLATPPLAT--ASSSYTTPTD 339
Score = 47 (21.6 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 136 YPSVTSAQTKTFSTPPPSHLSALFQHPTAASSHPS 170
YP V+ ++ ST + +SAL QH +S PS
Sbjct: 492 YPPVSVSEDDN-STSMRNSISALQQHCNVVTSTPS 525
Score = 34 (17.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 142 AQTKTFSTPPPSHLSALFQHPTAASSHPSQ 171
AQ++ + P H A P + S P+Q
Sbjct: 688 AQSQPQNQAPVHHQQASHSAPPSLSVPPNQ 717
>FB|FBgn0029123 [details] [associations]
symbol:SoxN "SoxNeuro" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0030111 "regulation of Wnt receptor signaling pathway"
evidence=IMP] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0007411 EMBL:AE014134 GO:GO:0030111 GO:GO:0045944
GO:GO:0007417 GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0031490
GeneTree:ENSGT00690000101940 ChiTaRS:QSOX2 HSSP:P48432 KO:K09267
FlyBase:FBgn0029123 EMBL:BT001514 RefSeq:NP_524735.1
UniGene:Dm.3272 SMR:Q9VLH8 STRING:Q9VLH8 EnsemblMetazoa:FBtr0079733
GeneID:44275 KEGG:dme:Dmel_CG18024 UCSC:CG18024-RA CTD:44275
InParanoid:Q9VLH8 OMA:HMSAHIA GenomeRNAi:44275 NextBio:837102
Uniprot:Q9VLH8
Length = 572
Score = 180 (68.4 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 40/66 (60%), Positives = 44/66 (66%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGA-PAPTSASNAFP 60
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT ++ K P G P T A P
Sbjct: 224 EKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLTKT--KEKYPMGGLMPGQTVGGGA-P 280
Query: 61 SFPLPP 66
P+ P
Sbjct: 281 GEPVTP 286
>UNIPROTKB|A4IIJ8 [details] [associations]
symbol:sox10 "Transcription factor Sox-10" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0014029 "neural crest
formation" evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0030318 "melanocyte differentiation" evidence=ISS] [GO:0032183
"SUMO binding" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0001755 GO:GO:0006351 GO:GO:0019899
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0010628 GO:GO:0014044 GO:GO:0030318 GO:GO:0048709
GO:GO:0050768 GO:GO:0048484 GO:GO:0048840 GO:GO:0048752
GO:GO:0032183 GO:GO:0071600 GO:GO:0014029 CTD:6663 eggNOG:NOG295709
GeneTree:ENSGT00670000097649 HOGENOM:HOG000108876 KO:K09270
OrthoDB:EOG41C6WH InterPro:IPR022151 Pfam:PF12444 EMBL:BC136047
RefSeq:NP_001093691.1 UniGene:Str.9225 ProteinModelPortal:A4IIJ8
SMR:A4IIJ8 STRING:A4IIJ8 Ensembl:ENSXETT00000013902
GeneID:100101700 KEGG:xtr:100101700 Xenbase:XB-GENE-480304
OMA:STSHYTE Bgee:A4IIJ8 Uniprot:A4IIJ8
Length = 436
Score = 133 (51.9 bits), Expect = 8.9e-13, Sum P(3) = 8.9e-13
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK-TPGQSIPNNKSPNQGAPAPTSA 55
+KRPFI+EA+RLR H K+HPDYKY+PRR+ P + S +G A A
Sbjct: 135 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKPNPGEGDGSSEAEGGAASIQA 189
Score = 43 (20.2 bits), Expect = 8.9e-13, Sum P(3) = 8.9e-13
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 136 YPSVTSAQTKTFSTPPPSHLSALFQHPTAASSHPSQFLY 174
+PS++ Q ++ PS S+ + H + ASS S F Y
Sbjct: 363 FPSISRPQFD-YADHQPS--SSYYSHSSQASSLYSAFSY 398
Score = 38 (18.4 bits), Expect = 8.9e-13, Sum P(3) = 8.9e-13
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 82 SLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQT 113
S+ A Y ++ H GSP N S+ GQ+
Sbjct: 186 SIQAHYKNSHLDHRHGSPMSDGN-SEHSAGQS 216
>UNIPROTKB|Q9W7R6 [details] [associations]
symbol:SOX14 "Transcription factor SOX-14" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043565 GO:GO:0006351 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:AB026622 EMBL:AF193760 EMBL:M86326 IPI:IPI00585113 PIR:I50196
RefSeq:NP_990092.1 UniGene:Gga.286 ProteinModelPortal:Q9W7R6
SMR:Q9W7R6 STRING:Q9W7R6 GeneID:395526 KEGG:gga:395526 CTD:8403
eggNOG:NOG302715 HOGENOM:HOG000231647 HOVERGEN:HBG105618
InParanoid:Q9W7R6 KO:K09267 OrthoDB:EOG47D9H0 NextBio:20815603
InterPro:IPR022097 Pfam:PF12336 Uniprot:Q9W7R6
Length = 240
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>UNIPROTKB|A4QNG3 [details] [associations]
symbol:sox14 "Transcription factor Sox-14" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007399
GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021854
GeneTree:ENSGT00690000101940 CTD:8403 eggNOG:NOG302715
HOGENOM:HOG000231647 KO:K09267 OMA:LGCPSQH EMBL:AM922298
EMBL:BC135637 RefSeq:NP_001093703.1 UniGene:Str.72434
ProteinModelPortal:A4QNG3 SMR:A4QNG3 STRING:A4QNG3
Ensembl:ENSXETT00000049107 GeneID:100101715 KEGG:xtr:100101715
Xenbase:XB-GENE-485370 Bgee:A4QNG3 Uniprot:A4QNG3
Length = 239
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>UNIPROTKB|B0ZTE2 [details] [associations]
symbol:sox14 "Transcription factor Sox-14" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0007399 "nervous
system development" evidence=IEP] [GO:0043565 "sequence-specific
DNA binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 CTD:8403 KO:K09267 EMBL:EU403425
RefSeq:NP_001165685.1 UniGene:Xl.85736 ProteinModelPortal:B0ZTE2
SMR:B0ZTE2 GeneID:100337614 KEGG:xla:100337614
Xenbase:XB-GENE-6458188 Uniprot:B0ZTE2
Length = 239
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>ZFIN|ZDB-GENE-051113-268 [details] [associations]
symbol:sox14 "SRY-box containing gene 14"
species:7955 "Danio rerio" [GO:0021854 "hypothalamus development"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 ZFIN:ZDB-GENE-051113-268 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021854
GeneTree:ENSGT00690000101940 HSSP:P48431 CTD:8403 eggNOG:NOG302715
HOGENOM:HOG000231647 KO:K09267 OrthoDB:EOG47D9H0 InterPro:IPR022097
Pfam:PF12336 EMBL:BC108033 IPI:IPI00511312 RefSeq:NP_001032769.1
UniGene:Dr.52424 ProteinModelPortal:Q32PP9 SMR:Q32PP9 STRING:Q32PP9
Ensembl:ENSDART00000104532 GeneID:557661 KEGG:dre:557661
InParanoid:Q32PP9 OMA:LGCPSQH NextBio:20882094 Bgee:Q32PP9
Uniprot:Q32PP9
Length = 238
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK 33
EKRP+IDEAKRLRA HMKEHPDYKYRPRRKPK
Sbjct: 53 EKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPK 84
>UNIPROTKB|Q8AXX8 [details] [associations]
symbol:sox10 "Transcription factor Sox-10" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0014029 "neural crest formation"
evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0032183
"SUMO binding" evidence=IPI] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0030318 GO:GO:0014029
HSSP:P48431 CTD:6663 KO:K09270 InterPro:IPR022151 Pfam:PF12444
EMBL:AY149116 EMBL:AY157667 EMBL:BC170062 RefSeq:NP_001082358.1
UniGene:Xl.1588 ProteinModelPortal:Q8AXX8 SMR:Q8AXX8 GeneID:398422
KEGG:xla:398422 Xenbase:XB-GENE-865362 Uniprot:Q8AXX8
Length = 446
Score = 134 (52.2 bits), Expect = 9.8e-13, Sum P(3) = 9.8e-13
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---TPGQSIPNNKSPNQGAPAPTSA 55
+KRPFI+EA+RLR H K+HPDYKY+PRR+ +PG+ + S +G A A
Sbjct: 143 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKPSPGEG--DGSSEAEGGAASIQA 197
Score = 42 (19.8 bits), Expect = 9.8e-13, Sum P(3) = 9.8e-13
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 136 YPSVTSAQTKTFSTPPPSHLSALFQHPTAASSHPSQFLY 174
+PS++ Q ++ PS S+ + H ASS S F Y
Sbjct: 373 FPSISRPQFD-YADHQPS--SSYYSHSAQASSLYSAFSY 408
Score = 38 (18.4 bits), Expect = 9.8e-13, Sum P(3) = 9.8e-13
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 82 SLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQT 113
S+ A Y ++ H GSP N S+ GQ+
Sbjct: 194 SIQAHYKNSHLDHRHGSPMSDGN-SEHSTGQS 224
>UNIPROTKB|P48433 [details] [associations]
symbol:SOX3 "Transcription factor SOX-3" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=ISS] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISS] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IMP] [GO:0060324
"face development" evidence=ISS] [GO:0007423 "sensory organ
development" evidence=ISS] [GO:0021983 "pituitary gland
development" evidence=ISS] [GO:0021854 "hypothalamus development"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007423 GO:GO:0045665
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0060324 GO:GO:0021983 GO:GO:0000979 GO:GO:0001106
GO:GO:0021854 UniGene:Gga.3795 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 EMBL:U12467 IPI:IPI00586970 PIR:I50705
ProteinModelPortal:P48433 SMR:P48433 Uniprot:P48433
Length = 312
Score = 172 (65.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 45/99 (45%), Positives = 54/99 (54%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT----PGQSIPNNKSPNQGAPAPTSASN 57
EKRPFIDEAKRLRA+HMKE+PDYKYRPRRK KT S+P N P P A+
Sbjct: 91 EKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGNLWP----PGSAGAAA 146
Query: 58 AFPSFPLPPYFANHG--GGSHPHPLDSLS-AAYPPMNMP 93
+ Y +G G++ D L +P MN P
Sbjct: 147 VGVGQRIDTYAHMNGWTNGAYSLMQDQLGYGQHPGMNSP 185
>ZFIN|ZDB-GENE-980526-102 [details] [associations]
symbol:sox19a "SRY-box containing gene 19a"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0005667
"transcription factor complex" evidence=IC] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-980526-102 GO:GO:0051091 GO:GO:0005667
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101940 EMBL:BX119902 InterPro:IPR022097
Pfam:PF12336 IPI:IPI00931891 Ensembl:ENSDART00000013309
ArrayExpress:E7F9F4 Bgee:E7F9F4 Uniprot:E7F9F4
Length = 314
Score = 172 (65.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 45/93 (48%), Positives = 51/93 (54%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPFIDEAKRLRA+HMKE+PDYKY+PRRK K P K N A P SA N +
Sbjct: 96 EKRPFIDEAKRLRALHMKEYPDYKYKPRRKTK------PVLKKDNPAAKYPLSAGNLLAA 149
Query: 62 FPLPPYFANHGGGSHPHPLDSL----SAAYPPM 90
A G G P +DS + YP M
Sbjct: 150 A------AAQGSGGSPR-MDSYGWGHTGGYPGM 175
>UNIPROTKB|O42569 [details] [associations]
symbol:sox2 "Transcription factor Sox-2" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007399
"nervous system development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 KO:K09267
InterPro:IPR022097 Pfam:PF12336 HOVERGEN:HBG105663 CTD:6657
EMBL:AF005476 EMBL:AF022928 EMBL:BC076717 RefSeq:NP_001081691.1
UniGene:Xl.188 ProteinModelPortal:O42569 SMR:O42569 DIP:DIP-29886N
GeneID:398000 KEGG:xla:398000 Xenbase:XB-GENE-865099 Uniprot:O42569
Length = 311
Score = 171 (65.3 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 82 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 114
>UNIPROTKB|Q6NVN0 [details] [associations]
symbol:sox2 "Transcription factor Sox-2" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0051091 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0031101 OrthoDB:EOG4MPHQV
GeneTree:ENSGT00690000101940 GO:GO:0048592 HSSP:P48432
eggNOG:NOG302715 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 CTD:6657 EMBL:CR760314 EMBL:BC067975
RefSeq:NP_998869.1 UniGene:Str.6201 ProteinModelPortal:Q6NVN0
SMR:Q6NVN0 Ensembl:ENSXETT00000004031 GeneID:407873 KEGG:xtr:407873
Xenbase:XB-GENE-484553 InParanoid:Q6NVN0 OMA:SAHNAPQ Bgee:Q6NVN0
Uniprot:Q6NVN0
Length = 311
Score = 171 (65.3 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 82 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 114
>ZFIN|ZDB-GENE-030909-1 [details] [associations]
symbol:sox2 "SRY-box containing gene 2" species:7955
"Danio rerio" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IC] [GO:0031101 "fin regeneration" evidence=IMP]
[GO:0048592 "eye morphogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-030909-1 GO:GO:0005737 GO:GO:0051091 GO:GO:0003677
GO:GO:0006351 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0031101 OrthoDB:EOG4MPHQV
GeneTree:ENSGT00690000101940 GO:GO:0048592 eggNOG:NOG302715
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 CTD:6657 OMA:MSALQYN EMBL:AB242329 EMBL:BC056743
EMBL:BC065656 IPI:IPI00499339 RefSeq:NP_998283.1 UniGene:Dr.5379
ProteinModelPortal:Q6P0E1 SMR:Q6P0E1 STRING:Q6P0E1 PRIDE:Q6P0E1
Ensembl:ENSDART00000104493 GeneID:378723 KEGG:dre:378723
InParanoid:Q6P0E1 NextBio:20813795 Bgee:Q6P0E1 Uniprot:Q6P0E1
Length = 315
Score = 171 (65.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMKEHPDYKYRPRRK KT
Sbjct: 83 EKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT 115
>UNIPROTKB|Q68FA4 [details] [associations]
symbol:sox3 "Transcription factor Sox-3" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0001704 "formation of primary germ layer" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0051091 GO:GO:0030182 GO:GO:0043565
GO:GO:0007422 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0008013 eggNOG:NOG321816
GeneTree:ENSGT00690000101940 OrthoDB:EOG45MN6C GO:GO:0043049
GO:GO:0001704 HSSP:P48432 HOGENOM:HOG000231647 KO:K09267
InterPro:IPR022097 Pfam:PF12336 HOVERGEN:HBG105663 CTD:6658
EMBL:BC079938 RefSeq:NP_001007502.1 UniGene:Str.27268
ProteinModelPortal:Q68FA4 SMR:Q68FA4 STRING:Q68FA4
Ensembl:ENSXETT00000016558 GeneID:493228 KEGG:xtr:493228
Xenbase:XB-GENE-484815 InParanoid:Q68FA4 OMA:PDPPAHR Bgee:Q68FA4
Uniprot:Q68FA4
Length = 307
Score = 170 (64.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 44/96 (45%), Positives = 56/96 (58%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTS-ASNAFP 60
EKRPFIDEAKRLRA+HMKE+PDYKYRPRRK KT + + N AP + AS+
Sbjct: 85 EKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGNLLAPGVSPVASSVGV 144
Query: 61 SFPLPPYFANHG--GGSHPHPLDSLS-AAYPPMNMP 93
+ Y +G G++ D L + +P MN P
Sbjct: 145 GQRIDTYAHMNGWTNGAYSLMQDQLGYSQHPGMNSP 180
>UNIPROTKB|E1B9L6 [details] [associations]
symbol:SOX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048627 "myoblast development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=IEA]
[GO:0043403 "skeletal muscle tissue regeneration" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
GO:GO:0043403 GO:GO:0048627 CTD:6665 KO:K09271 OMA:PQSDPRL
EMBL:DAAA02048793 IPI:IPI00703496 RefSeq:NP_001179004.1
UniGene:Bt.15965 Ensembl:ENSBTAT00000007184 GeneID:505878
KEGG:bta:505878 NextBio:20867356 Uniprot:E1B9L6
Length = 233
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 37/88 (42%), Positives = 50/88 (56%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G P+ +QG+ +
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKSKSAGAGSPHF---SQGSGGVAGGGPVWG- 149
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAYPP 89
P Y AN G + + S AY P
Sbjct: 150 ---PGYAANQGSRGFGYQPPNYSTAYLP 174
>UNIPROTKB|P56693 [details] [associations]
symbol:SOX10 "Transcription factor SOX-10" species:9606
"Homo sapiens" [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IEA]
[GO:0000980 "RNA polymerase II distal enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007422 "peripheral nervous system
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0014015 "positive regulation of
gliogenesis" evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0031315 "extrinsic to mitochondrial outer
membrane" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0048484 "enteric nervous system development" evidence=IEA]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA]
[GO:0048589 "developmental growth" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0048863 "stem
cell differentiation" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0043066
GO:GO:0001755 GO:GO:0001701 GO:GO:0045944 GO:GO:0048863
GO:GO:0007422 GO:GO:0006357 GO:GO:0003682 GO:GO:0003705
GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003713 GO:GO:0048589
GO:GO:0090090 GO:GO:0009653 GO:GO:0030318 GO:GO:0048709
GO:GO:0031315 GO:GO:0048484 GO:GO:0002052 GO:GO:0048546
GO:GO:0048469 EMBL:AL031587 Orphanet:897 GO:GO:0014015 Orphanet:895
CTD:6663 eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061
KO:K09270 InterPro:IPR022151 Pfam:PF12444 EMBL:AJ001183
EMBL:CR456584 EMBL:BT020029 EMBL:BC002824 EMBL:BC007595
IPI:IPI00010781 RefSeq:NP_008872.1 UniGene:Hs.376984
ProteinModelPortal:P56693 SMR:P56693 IntAct:P56693
MINT:MINT-1781695 STRING:P56693 PhosphoSite:P56693 DMDM:6175075
PRIDE:P56693 DNASU:6663 Ensembl:ENST00000360880
Ensembl:ENST00000396884 GeneID:6663 KEGG:hsa:6663 UCSC:uc003aun.1
GeneCards:GC22M038366 HGNC:HGNC:11190 HPA:CAB003171 MIM:602229
MIM:609136 MIM:611584 MIM:613266 neXtProt:NX_P56693 Orphanet:163746
PharmGKB:PA36027 InParanoid:P56693 OMA:YYGHSSQ PhylomeDB:P56693
GenomeRNAi:6663 NextBio:25977 ArrayExpress:P56693 Bgee:P56693
CleanEx:HS_SOX10 Genevestigator:P56693 GermOnline:ENSG00000100146
Uniprot:P56693
Length = 466
Score = 128 (50.1 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRPFI+EA+RLR H K+HPDYKY+PRR+
Sbjct: 149 DKRPFIEEAERLRMQHKKDHPDYKYQPRRR 178
Score = 66 (28.3 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 21/72 (29%), Positives = 32/72 (44%)
Query: 33 KTPGQSIPNNKSPNQGAPAPTSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNM 92
K PG ++P P A A A P P P++ + P S AY +++
Sbjct: 336 KPPGVALPTVSPPGVDAKAQVKTETAGPQGP--PHYTDQ-------PSTS-QIAYTSLSL 385
Query: 93 PHYFGSPFDAMN 104
PHY GS F +++
Sbjct: 386 PHY-GSAFPSIS 396
>UNIPROTKB|F1NSW6 [details] [associations]
symbol:SOX11 "Transcription factor SOX-11" species:9031
"Gallus gallus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0001841 "neural tube formation" evidence=IEA]
[GO:0002089 "lens morphogenesis in camera-type eye" evidence=IEA]
[GO:0003151 "outflow tract morphogenesis" evidence=IEA] [GO:0003211
"cardiac ventricle formation" evidence=IEA] [GO:0003357
"noradrenergic neuron differentiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=IEA] [GO:0014009 "glial cell proliferation" evidence=IEA]
[GO:0014032 "neural crest cell development" evidence=IEA]
[GO:0017015 "regulation of transforming growth factor beta receptor
signaling pathway" evidence=IEA] [GO:0021510 "spinal cord
development" evidence=IEA] [GO:0021782 "glial cell development"
evidence=IEA] [GO:0030513 "positive regulation of BMP signaling
pathway" evidence=IEA] [GO:0035332 "positive regulation of hippo
signaling cascade" evidence=IEA] [GO:0045666 "positive regulation
of neuron differentiation" evidence=IEA] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=IEA] [GO:0045778
"positive regulation of ossification" evidence=IEA] [GO:0046887
"positive regulation of hormone secretion" evidence=IEA]
[GO:0048485 "sympathetic nervous system development" evidence=IEA]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050672 "negative regulation of lymphocyte proliferation"
evidence=IEA] [GO:0050769 "positive regulation of neurogenesis"
evidence=IEA] [GO:0060022 "hard palate development" evidence=IEA]
[GO:0060023 "soft palate development" evidence=IEA] [GO:0060174
"limb bud formation" evidence=IEA] [GO:0060253 "negative regulation
of glial cell proliferation" evidence=IEA] [GO:0060412 "ventricular
septum morphogenesis" evidence=IEA] [GO:0060425 "lung
morphogenesis" evidence=IEA] [GO:0060548 "negative regulation of
cell death" evidence=IEA] [GO:0060563 "neuroepithelial cell
differentiation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061053 "somite development"
evidence=IEA] [GO:0061303 "cornea development in camera-type eye"
evidence=IEA] [GO:0061386 "closure of optic fissure" evidence=IEA]
[GO:2000648 "positive regulation of stem cell proliferation"
evidence=IEA] [GO:2001111 "positive regulation of lens epithelial
cell proliferation" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0008135 GO:GO:0001077
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0030513 GO:GO:0045669 GO:GO:0060548
GO:GO:0001105 GO:GO:0000979 GO:GO:0001158 GO:GO:0060563
GO:GO:0045778 GO:GO:0017015 GO:GO:0046887 GO:GO:2000648
GO:GO:0050672 IPI:IPI00602181 InterPro:IPR017386 PIRSF:PIRSF038098
OMA:TEEGEFM GO:GO:0035332 GO:GO:2001111 GO:GO:0072404
GeneTree:ENSGT00690000101789 EMBL:AADN02002906
Ensembl:ENSGALT00000026447 ArrayExpress:F1NSW6 Uniprot:F1NSW6
Length = 344
Score = 153 (58.9 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN-NKSPNQGAPAPTSAS 56
EK PFI EA+RLR HM ++PDYKYRPR+KPK + PN +SP + AP S S
Sbjct: 42 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKMDPSAKPNAGQSPEKNAPGGGSKS 97
Score = 34 (17.0 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 72 GGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQTSQAD 117
GGG + +++ PP P SP + + S G + +AD
Sbjct: 220 GGGRLYYSFKNITKQGPPPPQPPAGLSPASSRSISTSSAG-SEEAD 264
>UNIPROTKB|P55863 [details] [associations]
symbol:sox3-a "Transcription factor Sox-3-A" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0001704
"formation of primary germ layer" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=IDA] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0090090 GO:GO:0008013
GO:GO:0030514 GO:GO:0001704 KO:K09267 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 EMBL:AB000825 EMBL:Y07542
EMBL:BC072222 PIR:S22946 RefSeq:NP_001084148.1 UniGene:Xl.22
ProteinModelPortal:P55863 SMR:P55863 GeneID:399335 KEGG:xla:399335
CTD:6658 Xenbase:XB-GENE-484819 Uniprot:P55863
Length = 309
Score = 165 (63.1 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 42/96 (43%), Positives = 56/96 (58%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTS-ASNAFP 60
+KRPFIDEAKRLRA+HMK++PDYKYRPRRK KT + + N AP + AS+
Sbjct: 85 DKRPFIDEAKRLRAVHMKDYPDYKYRPRRKTKTLLKKDKYSLPGNLLAPGVSPVASSVGV 144
Query: 61 SFPLPPYFANHG--GGSHPHPLDSLS-AAYPPMNMP 93
+ Y +G G++ D L + +P MN P
Sbjct: 145 GQRIDTYAHMNGWTNGAYSLMQDQLGYSQHPAMNSP 180
>UNIPROTKB|P35713 [details] [associations]
symbol:SOX18 "Transcription factor SOX-18" species:9606
"Homo sapiens" [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0048866 "stem cell
fate specification" evidence=IEA] [GO:0072091 "regulation of stem
cell proliferation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0061028 "establishment of endothelial barrier" evidence=IMP]
[GO:0001525 "angiogenesis" evidence=IEP] [GO:0043534 "blood vessel
endothelial cell migration" evidence=IEP] [GO:0001946
"lymphangiogenesis" evidence=IMP] [GO:0022405 "hair cycle process"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0042789 "mRNA transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0003151 "outflow tract morphogenesis"
evidence=ISS] [GO:0001947 "heart looping" evidence=ISS] [GO:0001570
"vasculogenesis" evidence=ISS] [GO:0001944 "vasculature
development" evidence=ISS] [GO:0035050 "embryonic heart tube
development" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0060214 "endocardium formation" evidence=ISS] [GO:0060836
"lymphatic endothelial cell differentiation" evidence=ISS]
[GO:0060956 "endocardial cell differentiation" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0001701 GO:GO:0001525
GO:GO:0000978 GO:GO:0001077 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000790
GO:GO:0001942 GO:GO:0001946 GO:GO:0060836 GO:GO:0043534
GO:GO:0001570 GO:GO:0001947 GO:GO:0003151 GO:GO:0042789
GO:GO:0048469 GO:GO:0072091 GO:GO:0060956 GO:GO:0060214
GO:GO:0061028 EMBL:AL355803 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 KO:K09270 HOGENOM:HOG000069999 HOVERGEN:HBG000517
GO:GO:0048866 EMBL:AJ243896 EMBL:AB033888 EMBL:AF270652
EMBL:BC038590 EMBL:BC073971 EMBL:BC111390 EMBL:X65664
IPI:IPI00020428 PIR:S22941 RefSeq:NP_060889.1 UniGene:Hs.8619
ProteinModelPortal:P35713 SMR:P35713 IntAct:P35713 STRING:P35713
PhosphoSite:P35713 DMDM:12644232 PaxDb:P35713 PRIDE:P35713
Ensembl:ENST00000340356 GeneID:54345 KEGG:hsa:54345 UCSC:uc002yhs.3
CTD:54345 GeneCards:GC20M062679 HGNC:HGNC:11194 MIM:601618
MIM:607823 neXtProt:NX_P35713 Orphanet:69735 PharmGKB:PA36031
eggNOG:NOG252325 InParanoid:P35713 OMA:YLNCSRT OrthoDB:EOG4KSPKP
GenomeRNAi:54345 NextBio:56587 Bgee:P35713 CleanEx:HS_SOX18
Genevestigator:P35713 GermOnline:ENSG00000203883 GO:GO:0022405
Uniprot:P35713
Length = 384
Score = 167 (63.8 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 45/109 (41%), Positives = 60/109 (55%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-------PGQSIPNNKSPNQGAPAP-T 53
EKRPF++EA+RLR H+++HP+YKYRPRRK + PG +P +P Q P P
Sbjct: 130 EKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKARRLEPGLLLPG-LAPPQPPPEPFP 188
Query: 54 SASNAFPSF-PLPPYFANHGGGSHP----HPLDSL----SAAYPPMNMP 93
+AS + +F LPP A G P PLD L +A +PP P
Sbjct: 189 AASGSARAFRELPPLGAEFDGLGLPTPERSPLDGLEPGEAAFFPPPAAP 237
>UNIPROTKB|F1ST29 [details] [associations]
symbol:SOX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048627 "myoblast development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=IEA]
[GO:0043403 "skeletal muscle tissue regeneration" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
GO:GO:0043403 GO:GO:0048627 KO:K09271 OMA:PQSDPRL EMBL:CU914279
RefSeq:XP_003131994.1 UniGene:Ssc.61757 Ensembl:ENSSSCT00000019538
GeneID:100522397 KEGG:ssc:100522397 Uniprot:F1ST29
Length = 233
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 37/88 (42%), Positives = 50/88 (56%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPF++EAKRLRA H++++PDYKYRPRRK KT G + QG+ + + P
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKTKTSGAGSAHF---GQGS---SGVAGGGPV 147
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAYPP 89
+ P Y N G + + S AY P
Sbjct: 148 WG-PGYATNQGSRGFGYQPPNYSTAYLP 174
>ZFIN|ZDB-GENE-010111-1 [details] [associations]
symbol:sox19b "SRY-box containing gene 19b"
species:7955 "Danio rerio" [GO:0005667 "transcription factor
complex" evidence=IC] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-010111-1
GO:GO:0051091 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
InterPro:IPR022097 Pfam:PF12336 EMBL:CR848737 IPI:IPI00495401
Ensembl:ENSDART00000058910 ArrayExpress:F1R211 Bgee:F1R211
Uniprot:F1R211
Length = 293
Score = 163 (62.4 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 50/127 (39%), Positives = 61/127 (48%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQSIPNNKSP----NQGAPAPTSA 55
+EKRPFIDEAKRLRA+HMKE+PDYKY+PRRK K + P K P N A A
Sbjct: 97 VEKRPFIDEAKRLRAVHMKEYPDYKYKPRRKTKALMKKDNPVGKYPLAAGNLLASAVAQG 156
Query: 56 SNAFPSFPLPPYFANHGGG---------SHPHPLD--SLSAAYPPMNMPHY-FGSPFDAM 103
P + Y H GG +P L LSA P P+ S + M
Sbjct: 157 QGGSPR--MDGYGWGHAGGYMGMQGDALGYPQQLHRYDLSALQYPAAQPYMNSASSYSQM 214
Query: 104 NFSKLVQ 110
++S Q
Sbjct: 215 SYSSSAQ 221
>UNIPROTKB|Q5FWM3 [details] [associations]
symbol:sox3-b "Transcription factor Sox-3-B" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0001704
"formation of primary germ layer" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008013 "beta-catenin binding" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0008013
GO:GO:0001704 HSSP:P48432 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 EMBL:BC089283 EMBL:X65654 RefSeq:NP_001166875.1
UniGene:Xl.37985 ProteinModelPortal:Q5FWM3 SMR:Q5FWM3 GeneID:398329
KEGG:xla:398329 CTD:398329 Uniprot:Q5FWM3
Length = 307
Score = 161 (61.7 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
EKRPFIDEAKRLRA+HMK++PDYKYRPRRK KT
Sbjct: 85 EKRPFIDEAKRLRAVHMKDYPDYKYRPRRKTKT 117
>UNIPROTKB|Q90ZH8 [details] [associations]
symbol:sox18-a "Transcription factor Sox-18A" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043565 "sequence-specific
DNA binding" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HSSP:P48431 InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
KO:K09270 EMBL:AB052692 EMBL:BC169575 RefSeq:NP_001082102.1
UniGene:Xl.11958 ProteinModelPortal:Q90ZH8 SMR:Q90ZH8 GeneID:398226
KEGG:xla:398226 CTD:398226 Xenbase:XB-GENE-864957 Uniprot:Q90ZH8
Length = 363
Score = 133 (51.9 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 21/31 (67%), Positives = 29/31 (93%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 112 VEKRPFVEEAERLRVQHLQDHPNYKYRPRRK 142
Score = 49 (22.3 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 19/57 (33%), Positives = 25/57 (43%)
Query: 38 SIPNNKSPNQ-GAPAPTSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMP 93
S+P + SP+ G+ T +AF Y+ HGG PL LS PP P
Sbjct: 242 SLPYSSSPSHMGSFLRTPTPSAF-------YYKAHGGSPVCTPLGQLS---PPPEAP 288
Score = 38 (18.4 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 152 PSHLSALFQHPTAASSHPSQFLY 174
PSH+ + + PT PS F Y
Sbjct: 249 PSHMGSFLRTPT-----PSAFYY 266
>UNIPROTKB|B3DLD3 [details] [associations]
symbol:sox18 "Transcription factor Sox-18" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007507 "heart development" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007507
GO:GO:0006355 GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0030178
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 KO:K09270 CTD:54345
EMBL:BC167402 RefSeq:NP_001123409.1 UniGene:Str.78926
GeneID:100170185 KEGG:xtr:100170185 Xenbase:XB-GENE-483233
Uniprot:B3DLD3
Length = 362
Score = 132 (51.5 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H+++HP+YKYRPRRK
Sbjct: 113 EKRPFVEEAERLRVQHLQDHPNYKYRPRRK 142
Score = 50 (22.7 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 19/57 (33%), Positives = 25/57 (43%)
Query: 38 SIPNNKSPNQ-GAPAPTSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMP 93
S+P + SP+ G T ++AF Y+ HGG PL LS PP P
Sbjct: 241 SLPYSSSPSHMGGFLRTPTASAF-------YYNPHGGSPACTPLGQLS---PPPEAP 287
Score = 38 (18.4 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 152 PSHLSALFQHPTAAS 166
PSH+ + PTA++
Sbjct: 248 PSHMGGFLRTPTASA 262
>UNIPROTKB|P57074 [details] [associations]
symbol:SOX8 "Transcription factor SOX-8" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003170 "heart valve
development" evidence=IEP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEP] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0048709 GO:GO:0003170 HOGENOM:HOG000108876 HOVERGEN:HBG002061
KO:K09270 InterPro:IPR022151 Pfam:PF12444 EMBL:AF228664
IPI:IPI00593054 RefSeq:NP_990062.1 UniGene:Gga.4309
ProteinModelPortal:P57074 SMR:P57074 GeneID:395483 KEGG:gga:395483
CTD:30812 eggNOG:NOG324597 InParanoid:P57074 OrthoDB:EOG4ZKJMD
NextBio:20815563 Uniprot:P57074
Length = 470
Score = 135 (52.6 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS
Sbjct: 154 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKAGQS 191
Score = 49 (22.3 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 30/143 (20%), Positives = 47/143 (32%)
Query: 37 QSIPNNKSPNQGAPAPTSASNAFPSFPLPPYFANHGGG----SHPHPLD-SLSAAYPPMN 91
Q +P N + PA F S A GG +H P S S+A
Sbjct: 295 QYLPLNG--HTAMPADHGPGAGFYSTSYSHSAAGAGGAGQVWTHKSPASASPSSADSGQQ 352
Query: 92 MPHYFGSPFDAMNFSKLVQGQTSQADTKXXXXXXXXXXXXXXXLYPSVTSAQ-------T 144
PH ++S G + +D S +S+Q +
Sbjct: 353 RPHIKTEQLSPSHYSDQSHGSPAHSDYGSYSTQACATTASTATAAASFSSSQCDYTDLQS 412
Query: 145 KTFSTPPPSHLSALFQHPTAASS 167
+ P P + S+++Q+P SS
Sbjct: 413 SNYYNPYPGYPSSIYQYPYFHSS 435
>UNIPROTKB|O18896 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9823 "Sus
scrofa" [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISS] [GO:0002683 "negative regulation of immune system
process" evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0030916 "otic vesicle formation" evidence=ISS] [GO:0001708
"cell fate specification" evidence=ISS] [GO:2000741 "positive
regulation of mesenchymal stem cell differentiation" evidence=ISS]
[GO:2000020 "positive regulation of male gonad development"
evidence=ISS] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0010564 "regulation of cell cycle process"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006334 "nucleosome assembly" evidence=ISS]
[GO:0071504 "cellular response to heparin" evidence=ISS]
[GO:0071364 "cellular response to epidermal growth factor stimulus"
evidence=ISS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=ISS] [GO:0010634 "positive regulation
of epithelial cell migration" evidence=ISS] [GO:0070168 "negative
regulation of biomineral tissue development" evidence=ISS]
[GO:0030279 "negative regulation of ossification" evidence=ISS]
[GO:0003170 "heart valve development" evidence=ISS] [GO:0001894
"tissue homeostasis" evidence=ISS] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISS] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0061138
"morphogenesis of a branching epithelium" evidence=ISS] [GO:0060784
"regulation of cell proliferation involved in tissue homeostasis"
evidence=ISS] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=ISS] [GO:0060221 "retinal rod
cell differentiation" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=ISS] [GO:0060041 "retina development in
camera-type eye" evidence=ISS] [GO:0072289 "metanephric nephron
tubule formation" evidence=ISS] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISS] [GO:0090103
"cochlea morphogenesis" evidence=ISS] [GO:0051216 "cartilage
development" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0003415 "chondrocyte hypertrophy" evidence=ISS]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=ISS] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=ISS] [GO:0045662
"negative regulation of myoblast differentiation" evidence=ISS]
[GO:0042981 "regulation of apoptotic process" evidence=ISS]
[GO:0042127 "regulation of cell proliferation" evidence=ISS]
[GO:0035019 "somatic stem cell maintenance" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=ISS] [GO:0019100 "male germ-line sex
determination" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=ISS] [GO:0003203 "endocardial cushion morphogenesis"
evidence=ISS] [GO:0003179 "heart valve morphogenesis" evidence=ISS]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=ISS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0001942 "hair follicle development" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0035326 "enhancer
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0032332
"positive regulation of chondrocyte differentiation" evidence=ISS]
[GO:0001502 "cartilage condensation" evidence=ISS] [GO:0019933
"cAMP-mediated signaling" evidence=ISS] [GO:0008584 "male gonad
development" evidence=ISS] [GO:0006461 "protein complex assembly"
evidence=ISS] [GO:0003413 "chondrocyte differentiation involved in
endochondral bone morphogenesis" evidence=ISS] [GO:0001501
"skeletal system development" evidence=ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005634 "nucleus" evidence=ISS] [GO:0090190
"positive regulation of branching involved in ureteric bud
morphogenesis" evidence=ISS] [GO:0090184 "positive regulation of
kidney development" evidence=ISS] [GO:0072034 "renal vesicle
induction" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0007165 "signal
transduction" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0071560 GO:GO:0019933 GO:GO:0070371
GO:GO:0014068 GO:GO:0007283 GO:GO:0003682 GO:GO:0003705
GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504
GO:GO:0001942 GO:GO:0032332 GO:GO:0030279 GO:GO:0090090
GO:GO:0071260 GO:GO:0035019 GO:GO:0001934 GO:GO:0090190
GO:GO:0071364 GO:GO:0043491 GO:GO:0001502 GO:GO:0001837
GO:GO:0050680 GO:GO:0001158 GO:GO:0030858 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0050679
GO:GO:0002053 GO:GO:0001046 GO:GO:0061036 GO:GO:0003203
GO:GO:0032331 GO:GO:0045662 GO:GO:0060008 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0003179 GO:GO:0070168 GO:GO:0072289
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 GO:GO:2000741 GO:GO:0072034
GO:GO:0060221 OrthoDB:EOG4TXBRZ GO:GO:0003415 GO:GO:0060517
GO:GO:0060729 GO:GO:0002683 GO:GO:0060784 CTD:6662 EMBL:AF029696
RefSeq:NP_999008.1 UniGene:Ssc.16373 ProteinModelPortal:O18896
SMR:O18896 STRING:O18896 GeneID:396840 KEGG:ssc:396840
Uniprot:O18896
Length = 509
Score = 135 (52.6 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHISPNA 202
Score = 50 (22.7 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 14/55 (25%), Positives = 21/55 (38%)
Query: 86 AYPPMNMPHYFGSPFDAMNFSKLVQGQTSQADTKXXXXXXXXXXXXXXXLYPSVT 140
AY P N+PHY SP ++ + + Q D + LY + T
Sbjct: 419 AYSPFNLPHY--SP----SYPPITRSQYDYTDHQNSGSYYSHARSQGSVLYSTFT 467
Score = 36 (17.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 77 PHPLDSLSAAYPPMNMPHY 95
P L S +YPP+ Y
Sbjct: 422 PFNLPHYSPSYPPITRSQY 440
>UNIPROTKB|F1P1Z5 [details] [associations]
symbol:SOX8 "Transcription factor SOX-8" species:9031
"Gallus gallus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007422 "peripheral nervous system development"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010817 "regulation of hormone levels"
evidence=IEA] [GO:0014015 "positive regulation of gliogenesis"
evidence=IEA] [GO:0033690 "positive regulation of osteoblast
proliferation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0045444 "fat cell
differentiation" evidence=IEA] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046533 "negative
regulation of photoreceptor cell differentiation" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0060009
"Sertoli cell development" evidence=IEA] [GO:0060018 "astrocyte
fate commitment" evidence=IEA] [GO:0060221 "retinal rod cell
differentiation" evidence=IEA] [GO:0060612 "adipose tissue
development" evidence=IEA] [GO:0061138 "morphogenesis of a
branching epithelium" evidence=IEA] [GO:0072034 "renal vesicle
induction" evidence=IEA] [GO:0072197 "ureter morphogenesis"
evidence=IEA] [GO:0072289 "metanephric nephron tubule formation"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0007165 GO:GO:0043066 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0090190 GO:GO:0045444 GO:GO:0000979
GO:GO:0010817 GO:GO:0033690 GO:GO:0045662
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
IPI:IPI00593054 OMA:DQSHGSP GO:GO:0072034 EMBL:AADN02023690
Ensembl:ENSGALT00000008449 Uniprot:F1P1Z5
Length = 470
Score = 135 (52.6 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS
Sbjct: 154 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKAGQS 191
Score = 48 (22.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 20/101 (19%), Positives = 35/101 (34%)
Query: 75 SHPHPLD-SLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQTSQADTKXXXXXXXXXXXXXX 133
+H P S S+A PH ++S G + +D
Sbjct: 335 THKSPASASPSSADSGQQRPHIKTEQLSPSHYSDQSHGSPAHSDYGSYSTQACATTASTA 394
Query: 134 XLYPSVTSAQ-------TKTFSTPPPSHLSALFQHPTAASS 167
S +S+Q + + P P + S+++Q+P SS
Sbjct: 395 TAAASFSSSQCDYTDLQSSNYYNPYPGYPSSIYQYPYFHSS 435
>UNIPROTKB|E2R0K1 [details] [associations]
symbol:SOX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072197 "ureter morphogenesis" evidence=ISS]
[GO:0048709 "oligodendrocyte differentiation" evidence=ISS]
[GO:0033690 "positive regulation of osteoblast proliferation"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048484 "enteric nervous system
development" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0014015 "positive regulation
of gliogenesis" evidence=ISS] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0001755
"neural crest cell migration" evidence=ISS] [GO:0072289
"metanephric nephron tubule formation" evidence=ISS] [GO:0061138
"morphogenesis of a branching epithelium" evidence=ISS] [GO:0060612
"adipose tissue development" evidence=ISS] [GO:0060221 "retinal rod
cell differentiation" evidence=ISS] [GO:0060041 "retina development
in camera-type eye" evidence=ISS] [GO:0060009 "Sertoli cell
development" evidence=ISS] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=ISS] [GO:0045165 "cell fate
commitment" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=ISS] [GO:0010817 "regulation of hormone levels"
evidence=ISS] [GO:0008584 "male gonad development" evidence=ISS]
[GO:0007422 "peripheral nervous system development" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0001701 "in utero
embryonic development" evidence=ISS] [GO:0001649 "osteoblast
differentiation" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0090184
"positive regulation of kidney development" evidence=ISS]
[GO:0072034 "renal vesicle induction" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0060018
"astrocyte fate commitment" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0007165 GO:GO:0045893
GO:GO:0043066 GO:GO:0001755 GO:GO:0001701 GO:GO:0045944
GO:GO:0007422 GO:GO:0060612 GO:GO:0003700 GO:GO:0007283
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0060009 GO:GO:0090190 GO:GO:0001649 GO:GO:0045444
GO:GO:0000979 GO:GO:0048709 GO:GO:0048484 GO:GO:0010817
GO:GO:0048469 GO:GO:0033690 GO:GO:0045662 GO:GO:0046533
GO:GO:0060018 GO:GO:0014015 GO:GO:0072289 GO:GO:0072197
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
GO:GO:0061138 GO:GO:0072034 GO:GO:0060221 EMBL:AAEX03004665
EMBL:AAEX03004666 Ensembl:ENSCAFT00000031157 Uniprot:E2R0K1
Length = 462
Score = 161 (61.7 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNNKSPNQGAPAPTSAS-NAF 59
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQ ++ S + P P SA A
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKTGQG--DSDSGAELGPHPGSAVYKAD 204
Query: 60 PSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSP 99
P + +H G +H P + P M++ H+ G P
Sbjct: 205 AGLGEPHHHGDHAGQTHGPPTPPTT---PKMDL-HHGGKP 240
>RGD|1305371 [details] [associations]
symbol:Sox17 "SRY (sex determining region Y)-box 17"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001570
"vasculogenesis" evidence=IEA;ISO] [GO:0001706 "endoderm formation"
evidence=ISO] [GO:0001828 "inner cell mass cellular morphogenesis"
evidence=IEA;ISO] [GO:0001947 "heart looping" evidence=IEA;ISO]
[GO:0003142 "cardiogenic plate morphogenesis" evidence=IEA;ISO]
[GO:0003143 "embryonic heart tube morphogenesis" evidence=ISO]
[GO:0003151 "outflow tract morphogenesis" evidence=IEA;ISO]
[GO:0003308 "negative regulation of Wnt receptor signaling pathway
involved in heart development" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO] [GO:0007369 "gastrulation" evidence=ISO]
[GO:0007492 "endoderm development" evidence=ISO] [GO:0007493
"endodermal cell fate determination" evidence=IEA;ISO] [GO:0008013
"beta-catenin binding" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010628 "positive regulation of gene expression"
evidence=ISO] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IEA;ISO] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA;ISO] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=IEA;ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=ISO] [GO:0042074 "cell migration involved in gastrulation"
evidence=IEA;ISO] [GO:0042661 "regulation of mesodermal cell fate
specification" evidence=ISO] [GO:0042662 "negative regulation of
mesodermal cell fate specification" evidence=IEA;ISO] [GO:0042789
"mRNA transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA;ISO] [GO:0045595 "regulation of cell differentiation"
evidence=ISO] [GO:0045597 "positive regulation of cell
differentiation" evidence=IEA;ISO] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0045995 "regulation
of embryonic development" evidence=ISO] [GO:0048568 "embryonic
organ development" evidence=IEA;ISO] [GO:0048617 "embryonic foregut
morphogenesis" evidence=IEA;ISO] [GO:0048643 "positive regulation
of skeletal muscle tissue development" evidence=IEA;ISO]
[GO:0048863 "stem cell differentiation" evidence=ISO] [GO:0048866
"stem cell fate specification" evidence=IEA;ISO] [GO:0050821
"protein stabilization" evidence=IEA;ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0060214
"endocardium formation" evidence=IEA;ISO] [GO:0060807 "regulation
of transcription from RNA polymerase II promoter involved in
definitive endodermal cell fate specification" evidence=IEA;ISO]
[GO:0060913 "cardiac cell fate determination" evidence=IEA;ISO]
[GO:0060956 "endocardial cell differentiation" evidence=IEA;ISO]
[GO:0061009 "common bile duct development" evidence=IEA;ISO]
[GO:0061010 "gall bladder development" evidence=IEA;ISO]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=IEA;ISO] [GO:0072001 "renal system development"
evidence=IEA;ISO] [GO:0072091 "regulation of stem cell
proliferation" evidence=IEA;ISO] [GO:0090090 "negative regulation
of canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:2000035 "regulation of stem cell division" evidence=IEA;ISO]
[GO:2000043 "regulation of cardiac cell fate specification"
evidence=IEA;ISO] InterPro:IPR009071 Pfam:PF00505 RGD:1305371
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:CH473984 KO:K04495 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 CTD:64321 OMA:ALPCRDG
RefSeq:NP_001101372.1 UniGene:Rn.7884 Ensembl:ENSRNOT00000033116
GeneID:312936 KEGG:rno:312936 NextBio:665393 Uniprot:G3V923
Length = 423
Score = 141 (54.7 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 41/119 (34%), Positives = 55/119 (46%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKP------KTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P GA P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRMKRVEGGFLHALAEPQAGALGPEGG 172
Query: 56 SNAF---------PSFPL-PPYFANHGGGSHPHPLDSLSA-AYPPMNMPHYFGSPFDAM 103
A P +P PP + H G +H L A A +P SP D +
Sbjct: 173 RVAMDGLGLPFPEPGYPAGPPLMSPHMG-AHYRDCQGLGAPALDGYPLPTPDTSPLDGV 230
Score = 40 (19.1 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 9/21 (42%), Positives = 9/21 (42%)
Query: 150 PPPSHLSALFQHPTAASSHPS 170
PPP QHPT PS
Sbjct: 323 PPPPPPPPPQQHPTHGPGQPS 343
>UNIPROTKB|Q6VVD7 [details] [associations]
symbol:sox8 "Transcription factor Sox-8" species:8355
"Xenopus laevis" [GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0014029 KO:K09270
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 CTD:30812 EMBL:AY324658
EMBL:BC169521 EMBL:BC169525 RefSeq:NP_001083964.1 UniGene:Xl.29789
ProteinModelPortal:Q6VVD7 SMR:Q6VVD7 GeneID:399214 KEGG:xla:399214
Xenbase:XB-GENE-480869 Uniprot:Q6VVD7
Length = 459
Score = 135 (52.6 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS
Sbjct: 143 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKAGQS 180
Score = 47 (21.6 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 28/138 (20%), Positives = 48/138 (34%)
Query: 38 SIPNNKSPNQ-GAPAPTSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYF 96
+IP + N AP S +A + P P + +H S S S+ PH
Sbjct: 293 AIPADHGQNTTAAPYGPSYPHAAGATPAPVW--SHKSSS----TSSSSSIESGQQRPHIK 346
Query: 97 GSPFDAMNFSKLVQGQTSQADTKXXXXXXXXXXXXXXXL---YPS----VTSAQTKTFST 149
+++ QG + +D + +PS T + +
Sbjct: 347 TEQLSPSHYNDQSQGSPTHSDYNTYSAQACATTVSSATVPTAFPSSQCDYTDLPSSNYYN 406
Query: 150 PPPSHLSALFQHPTAASS 167
P + S+L+Q+P SS
Sbjct: 407 PYSGYPSSLYQYPYFHSS 424
>UNIPROTKB|Q66JF1 [details] [associations]
symbol:sox11 "Transcription factor Sox-11" species:8364
"Xenopus (Silurana) tropicalis" [GO:0007399 "nervous system
development" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 CTD:6664 KO:K09268
InterPro:IPR017386 PIRSF:PIRSF038098 eggNOG:NOG130659 EMBL:AC148407
EMBL:BC080939 RefSeq:NP_001008053.1 UniGene:Str.15716 HSSP:P48432
ProteinModelPortal:Q66JF1 SMR:Q66JF1 STRING:Q66JF1 GeneID:493415
KEGG:xtr:493415 Xenbase:XB-GENE-483418 Uniprot:Q66JF1
Length = 383
Score = 157 (60.3 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 46/112 (41%), Positives = 58/112 (51%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQSIPNN--KSPNQGAPAPTSASNA 58
EK PFI EA+RLR HM ++PDYKYRPR+KPK P S P + +SP + +P SA
Sbjct: 93 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKVDPSASKPASLAQSPEK-SPKSRSAGKK 151
Query: 59 FPSFPLPPYFANHGGGSHPH-PLDSLSAAYPPMNMPHYFGSPFDAMNFSKLV 109
P L P +H G S SL+ + FGSP A +K V
Sbjct: 152 CPK--LKP--GSHSGSSSSSGSAKSLTIKSEYGGDDYVFGSPKAASKAAKCV 199
>UNIPROTKB|Q90ZH7 [details] [associations]
symbol:sox18-b "Transcription factor Sox-18B" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007507
"heart development" evidence=IMP] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007507 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0030178 HSSP:P48431
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 KO:K09270
EMBL:AB052693 EMBL:BC072123 RefSeq:NP_001082104.1 UniGene:Xl.11959
ProteinModelPortal:Q90ZH7 SMR:Q90ZH7 GeneID:398227 KEGG:xla:398227
CTD:398227 Xenbase:XB-GENE-6251810 Uniprot:Q90ZH7
Length = 361
Score = 136 (52.9 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 38/106 (35%), Positives = 52/106 (49%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKP--KTPGQSIPNNKSPNQGAPAPTSASNAF 59
EKRPF++EA+RLR H+++HP+YKYRPRRK K + P++ N+G N
Sbjct: 111 EKRPFVEEAERLRVQHLQDHPNYKYRPRRKKQAKKLKRMDPSHHLRNEGYTGGQPMVNLS 170
Query: 60 PSFPLPPYFANHGGGSH----PH--PLDSLSAAYPPMNMPHYFGSP 99
L P + S+ P PLD L + P PH P
Sbjct: 171 HFRELHPLGGSGELESYGLPTPEMSPLDVLEPSEPAFFPPHMREDP 216
Score = 40 (19.1 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 147 FSTPPPSHLSALFQHPTAASSHPSQFLY 174
+ST P SH+ + + PT PS F Y
Sbjct: 243 YSTSP-SHMGSFLRTPT-----PSAFYY 264
>UNIPROTKB|B4DWU7 [details] [associations]
symbol:SOX15 "Protein SOX-15" species:9606 "Homo sapiens"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0043403 "skeletal muscle tissue regeneration"
evidence=IEA] [GO:0045843 "negative regulation of striated muscle
tissue development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048627 "myoblast development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003682 GO:GO:0045843 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0043403 EMBL:AC016876 GO:GO:0048627 IPI:IPI00028451
HGNC:HGNC:11196 HOVERGEN:HBG055512 EMBL:AK301687 SMR:B4DWU7
STRING:B4DWU7 Ensembl:ENST00000570788 Uniprot:B4DWU7
Length = 178
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQG 48
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G P+ +G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSGAG-PSRCGQGRG 139
>UNIPROTKB|O60248 [details] [associations]
symbol:SOX15 "Protein SOX-15" species:9606 "Homo sapiens"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0043403 "skeletal muscle tissue
regeneration" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0006325 "chromatin
organization" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008584 "male gonad development" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0014718 "positive
regulation of satellite cell activation involved in skeletal muscle
regeneration" evidence=ISS] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=ISS] [GO:0048627
"myoblast development" evidence=ISS] [GO:2000288 "positive
regulation of myoblast proliferation" evidence=ISS] [GO:0030154
"cell differentiation" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0070318 "positive regulation of G0 to G1
transition" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 EMBL:CH471108 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 GO:GO:0008584
GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006325 GO:GO:0014718
GO:GO:0070318 GO:GO:0043403 GO:GO:2000288 GO:GO:0048627
CleanEx:HS_SOX12 HOGENOM:HOG000231647 CTD:6665 EMBL:AB006867
EMBL:BC000985 EMBL:BC072003 EMBL:X73039 EMBL:AJ006222 EMBL:AB025355
IPI:IPI00028451 PIR:S34119 RefSeq:NP_008873.1 UniGene:Hs.95582
ProteinModelPortal:O60248 SMR:O60248 STRING:O60248
PhosphoSite:O60248 PRIDE:O60248 DNASU:6665 Ensembl:ENST00000250055
Ensembl:ENST00000538513 GeneID:6665 KEGG:hsa:6665 UCSC:uc002ghy.1
GeneCards:GC17M007491 HGNC:HGNC:11196 MIM:601297 neXtProt:NX_O60248
PharmGKB:PA36033 eggNOG:NOG311451 HOVERGEN:HBG055512
InParanoid:O60248 KO:K09271 OMA:PQSDPRL OrthoDB:EOG40K80Q
PhylomeDB:O60248 GenomeRNAi:6665 NextBio:25987 ArrayExpress:O60248
Bgee:O60248 CleanEx:HS_SOX15 Genevestigator:O60248
GermOnline:ENSG00000129194 Uniprot:O60248
Length = 233
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQG 48
EKRPF++EAKRLRA H++++PDYKYRPRRK K+ G P+ +G
Sbjct: 94 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKSSGAG-PSRCGQGRG 139
>MGI|MGI:98363 [details] [associations]
symbol:Sox15 "SRY-box containing gene 15" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IGI;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030154
"cell differentiation" evidence=IGI] [GO:0043403 "skeletal muscle
tissue regeneration" evidence=IMP] [GO:0045843 "negative regulation
of striated muscle tissue development" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IDA] [GO:0048627 "myoblast development"
evidence=IMP] InterPro:IPR009071 MGI:MGI:98363 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0003682 GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0014718
GO:GO:0070318 GO:GO:0043403 GO:GO:2000288 GO:GO:0048627 CTD:6665
eggNOG:NOG311451 HOVERGEN:HBG055512 KO:K09271 OMA:PQSDPRL
OrthoDB:EOG40K80Q EMBL:AB014474 EMBL:AF182945 EMBL:AB039214
EMBL:AB039215 EMBL:AB039216 EMBL:AB039217 EMBL:AB039218
EMBL:AB039219 EMBL:AB039220 EMBL:AB039221 EMBL:AB039222 EMBL:U70443
EMBL:X70909 EMBL:X98369 IPI:IPI00118219 PIR:S33715
RefSeq:NP_033261.1 UniGene:Mm.347499 ProteinModelPortal:P43267
SMR:P43267 MINT:MINT-4788454 STRING:P43267 PhosphoSite:P43267
PRIDE:P43267 Ensembl:ENSMUST00000047373 GeneID:20670 KEGG:mmu:20670
InParanoid:P43267 NextBio:299147 Bgee:P43267 CleanEx:MM_SOX15
Genevestigator:P43267 GermOnline:ENSMUSG00000041287 Uniprot:P43267
Length = 231
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 37/89 (41%), Positives = 51/89 (57%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQ-SIPNNKSPNQGAPAPTSASNAFP 60
EKRPF++EAKRLRA H++++PDYKYRPRRK K S+P ++ +G S+ P
Sbjct: 92 EKRPFVEEAKRLRARHLRDYPDYKYRPRRKSKNSSTGSVPFSQ---EGGGLACGGSHWGP 148
Query: 61 SFPLPPYFANHGGGSHPHPLDSLSAAYPP 89
+ + G G P P + S AY P
Sbjct: 149 GYTTTQ--GSRGFGYQP-P--NYSTAYLP 172
>MGI|MGI:103559 [details] [associations]
symbol:Sox18 "SRY-box containing gene 18" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=ISO] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0001525 "angiogenesis" evidence=IGI] [GO:0001568 "blood vessel
development" evidence=IMP] [GO:0001570 "vasculogenesis"
evidence=IGI] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0001944 "vasculature development" evidence=IMP] [GO:0001945
"lymph vessel development" evidence=IMP] [GO:0001946
"lymphangiogenesis" evidence=ISO;IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0007507 "heart development" evidence=IMP]
[GO:0022405 "hair cycle process" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IGI] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO;IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048469 "cell maturation"
evidence=IDA] [GO:0048866 "stem cell fate specification"
evidence=IDA] [GO:0060214 "endocardium formation" evidence=IGI]
[GO:0060836 "lymphatic endothelial cell differentiation"
evidence=IMP] [GO:0060956 "endocardial cell differentiation"
evidence=IGI] [GO:0061028 "establishment of endothelial barrier"
evidence=ISO] [GO:0072091 "regulation of stem cell proliferation"
evidence=IDA] InterPro:IPR009071 MGI:MGI:103559 Pfam:PF00505
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0043565
GO:GO:0001701 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0001942 GO:GO:0001946
GO:GO:0060836 GO:GO:0043534 GO:GO:0001570 GO:GO:0048469
GO:GO:0035050 GO:GO:0072091 GO:GO:0060956 GO:GO:0060214
GO:GO:0061028 InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 KO:K09270 HOGENOM:HOG000069999
HOVERGEN:HBG000517 GO:GO:0048866 CTD:54345 eggNOG:NOG252325
OMA:YLNCSRT OrthoDB:EOG4KSPKP EMBL:L35032 EMBL:AF288518
EMBL:BC006612 EMBL:L29086 IPI:IPI00377924 RefSeq:NP_033262.2
UniGene:Mm.264904 ProteinModelPortal:P43680 SMR:P43680
STRING:P43680 PhosphoSite:P43680 PRIDE:P43680
Ensembl:ENSMUST00000054491 GeneID:20672 KEGG:mmu:20672
InParanoid:P43680 NextBio:299155 Bgee:P43680 CleanEx:MM_SOX18
Genevestigator:P43680 GermOnline:ENSMUSG00000046470 Uniprot:P43680
Length = 377
Score = 156 (60.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 42/108 (38%), Positives = 57/108 (52%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-------PGQSIPNNKSPNQGAPAPTS 54
EKRPF++EA+RLR H+++HP+YKYRPRRK + PG +P P+ A +
Sbjct: 124 EKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKVRRLEPGLLLPGLVQPSAPPEAFAA 183
Query: 55 ASNAFPSF-PLPPYFANHGGGSHP----HPLDSL----SAAYPPMNMP 93
AS + SF LP A G P PLD L ++ +PP P
Sbjct: 184 ASGSARSFRELPTLGAEFDGLGLPTPERSPLDGLEPGEASFFPPPLAP 231
>RGD|1311718 [details] [associations]
symbol:Sox18 "SRY (sex determining region Y)-box 18"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=ISO] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001525 "angiogenesis" evidence=IEA;ISO]
[GO:0001568 "blood vessel development" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0001942 "hair follicle
development" evidence=IEA;ISO] [GO:0001944 "vasculature
development" evidence=ISO] [GO:0001945 "lymph vessel development"
evidence=ISO] [GO:0001946 "lymphangiogenesis" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0022405 "hair cycle process" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IEA;ISO] [GO:0042789
"mRNA transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0043534 "blood vessel endothelial cell migration"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0048469 "cell
maturation" evidence=IEA;ISO] [GO:0048866 "stem cell fate
specification" evidence=IEA;ISO] [GO:0060214 "endocardium
formation" evidence=IEA;ISO] [GO:0060836 "lymphatic endothelial
cell differentiation" evidence=IEA;ISO] [GO:0060956 "endocardial
cell differentiation" evidence=IEA;ISO] [GO:0061028 "establishment
of endothelial barrier" evidence=IEA;ISO] [GO:0072091 "regulation
of stem cell proliferation" evidence=IEA;ISO] InterPro:IPR009071
Pfam:PF00505 RGD:1311718 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0001701 GO:GO:0045944 GO:GO:0003700 GO:GO:0001525
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0001942 GO:GO:0001946 GO:GO:0060836
GO:GO:0043534 GO:GO:0001570 GO:GO:0048469 GO:GO:0035050
GO:GO:0072091 GO:GO:0060956 GO:GO:0060214 GO:GO:0061028
EMBL:CH474066 InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 KO:K09270 HOGENOM:HOG000069999
HOVERGEN:HBG000517 GO:GO:0048866 CTD:54345 eggNOG:NOG252325
OMA:YLNCSRT OrthoDB:EOG4KSPKP EMBL:BC097973 IPI:IPI00211524
RefSeq:NP_001019952.1 UniGene:Rn.22446 SMR:Q4V7E4
Ensembl:ENSRNOT00000021790 GeneID:311723 KEGG:rno:311723
UCSC:RGD:1311718 InParanoid:Q4V7E4 NextBio:664090
Genevestigator:Q4V7E4 Uniprot:Q4V7E4
Length = 377
Score = 156 (60.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 43/109 (39%), Positives = 57/109 (52%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-------PGQSIPNNKSPNQGAPAP-T 53
EKRPF++EA+RLR H+++HP+YKYRPRRK + PG +P P+ P P
Sbjct: 124 EKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKVRRLEPGLLLPGLVQPS-APPEPFA 182
Query: 54 SASNAFPSF-PLPPYFANHGGGSHP----HPLDSLSAA----YPPMNMP 93
+AS + SF LP A G P PLD L + +PP P
Sbjct: 183 AASGSARSFRELPTLGAEFDGLGLPTPERSPLDGLESGEASFFPPPLAP 231
>RGD|1309072 [details] [associations]
symbol:Sox8 "SRY (sex determining region Y)-box 8" species:10116
"Rattus norvegicus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=ISO;ISS] [GO:0001649
"osteoblast differentiation" evidence=ISO;ISS] [GO:0001701 "in
utero embryonic development" evidence=ISO;ISS] [GO:0001755 "neural
crest cell migration" evidence=ISO;ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007165 "signal transduction" evidence=ISO;ISS] [GO:0007283
"spermatogenesis" evidence=ISO;ISS] [GO:0007422 "peripheral nervous
system development" evidence=ISO;ISS] [GO:0008134 "transcription
factor binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008584 "male gonad development" evidence=ISO;ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0010817 "regulation of hormone levels" evidence=ISO;ISS]
[GO:0014015 "positive regulation of gliogenesis" evidence=ISO;ISS]
[GO:0033690 "positive regulation of osteoblast proliferation"
evidence=ISO;ISS] [GO:0035914 "skeletal muscle cell
differentiation" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO;ISS] [GO:0043565 "sequence-specific
DNA binding" evidence=ISO] [GO:0045165 "cell fate commitment"
evidence=ISO;ISS] [GO:0045444 "fat cell differentiation"
evidence=ISO;ISS] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=ISO;ISS] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046533
"negative regulation of photoreceptor cell differentiation"
evidence=IEA;ISO] [GO:0048469 "cell maturation" evidence=IEA;ISO]
[GO:0048484 "enteric nervous system development" evidence=ISO;ISS]
[GO:0048709 "oligodendrocyte differentiation" evidence=ISO;ISS]
[GO:0060009 "Sertoli cell development" evidence=ISO;ISS]
[GO:0060018 "astrocyte fate commitment" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye"
evidence=ISO;ISS] [GO:0060221 "retinal rod cell differentiation"
evidence=ISO;ISS] [GO:0060612 "adipose tissue development"
evidence=ISO;ISS] [GO:0061138 "morphogenesis of a branching
epithelium" evidence=ISO;ISS] [GO:0072034 "renal vesicle induction"
evidence=ISO;ISS] [GO:0072197 "ureter morphogenesis"
evidence=ISO;ISS] [GO:0072289 "metanephric nephron tubule
formation" evidence=ISO;ISS] [GO:0090184 "positive regulation of
kidney development" evidence=ISO;ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISO;ISS] InterPro:IPR009071 Pfam:PF00505 RGD:1309072
GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0007165
GO:GO:0045893 GO:GO:0043066 GO:GO:0001755 GO:GO:0001701
GO:GO:0045944 GO:GO:0007422 GO:GO:0060612 GO:GO:0003700
GO:GO:0007283 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0060009 GO:GO:0090190 GO:GO:0001649
GO:GO:0045444 GO:GO:0000979 EMBL:CH473948 GO:GO:0048709
GO:GO:0048484 GO:GO:0010817 GO:GO:0048469 GO:GO:0033690
GO:GO:0045662 GO:GO:0046533 GO:GO:0060018 GO:GO:0014015
GO:GO:0072289 GO:GO:0072197 GeneTree:ENSGT00670000097649 KO:K09270
InterPro:IPR022151 Pfam:PF12444 CTD:30812 OrthoDB:EOG4ZKJMD
OMA:DQSHGSP GO:GO:0061138 GO:GO:0072034 GO:GO:0060221
IPI:IPI00368755 RefSeq:NP_001100459.1 UniGene:Rn.141194
Ensembl:ENSRNOT00000025494 GeneID:302993 KEGG:rno:302993
UCSC:RGD:1309072 NextBio:650512 Uniprot:D3ZR96
Length = 463
Score = 131 (51.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 144 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 173
Score = 46 (21.3 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 30/133 (22%), Positives = 48/133 (36%)
Query: 36 GQSIPNNKSPNQGAPAPTSASNAFPSFPLPPYFANHGGGSHPH-PLDSLSAAYPPMNMPH 94
G S ++ + GA +P A PS P G PH + LS ++ + H
Sbjct: 310 GASYSHSGATGIGA-SPVWAHKGAPSASASP---TEAGPLRPHIKTEQLSPSHYN-DQSH 364
Query: 95 YFGSPFDAMNFSKLVQGQTSQADTKXXXXXXXXXXXXXXXLYPSVTSAQTKTFSTPPPSH 154
GSP A ++ ++QA T Q + +P P +
Sbjct: 365 --GSPGRA-DYGSY----SAQASVTTAASATAASSFASAQC--DYTDLQASNYYSPYPGY 415
Query: 155 LSALFQHPTAASS 167
+L+Q+P SS
Sbjct: 416 PPSLYQYPYFHSS 428
>UNIPROTKB|F1NFH7 [details] [associations]
symbol:SOX2 "Transcription factor SOX-2" species:9031
"Gallus gallus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0021879 "forebrain neuron differentiation" evidence=IEA]
[GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021987
"cerebral cortex development" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IEA] [GO:0030858 "positive
regulation of epithelial cell differentiation" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0032526
"response to retinoic acid" evidence=IEA] [GO:0035019 "somatic stem
cell maintenance" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043586 "tongue
development" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0045747 "positive regulation of Notch signaling pathway"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046148 "pigment
biosynthetic process" evidence=IEA] [GO:0048286 "lung alveolus
development" evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IEA] [GO:0050910 "detection of mechanical
stimulus involved in sensory perception of sound" evidence=IEA]
[GO:0050973 "detection of mechanical stimulus involved in
equilibrioception" evidence=IEA] [GO:0060042 "retina morphogenesis
in camera-type eye" evidence=IEA] [GO:0060235 "lens induction in
camera-type eye" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0070848
"response to growth factor stimulus" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829
GO:GO:0001708 GO:GO:0009611 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0003700 GO:GO:0045747 GO:GO:0007050
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0032526 GO:GO:0043410 GO:GO:0090090 GO:GO:0035198
GO:GO:0050680 GO:GO:0070848 GO:GO:0030858 GO:GO:0045668
GO:GO:0046148 GO:GO:0043281 GeneTree:ENSGT00690000101940
EMBL:AADN02020755 IPI:IPI00822043 Ensembl:ENSGALT00000039636
ArrayExpress:F1NFH7 Uniprot:F1NFH7
Length = 54
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 26/27 (96%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKEHPDYKYRP
Sbjct: 28 EKRPFIDEAKRLRALHMKEHPDYKYRP 54
>UNIPROTKB|P48435 [details] [associations]
symbol:SOX11 "Transcription factor SOX-11" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0090263 "positive regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0090263
EMBL:U12534 IPI:IPI00602181 PIR:I50707 RefSeq:NP_990518.1
UniGene:Gga.32193 ProteinModelPortal:P48435 SMR:P48435
GeneID:396104 KEGG:gga:396104 CTD:6664 HOVERGEN:HBG005040 KO:K09268
NextBio:20816162 InterPro:IPR017386 PIRSF:PIRSF038098
Uniprot:P48435
Length = 396
Score = 153 (58.9 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN-NKSPNQGAPAPTSAS 56
EK PFI EA+RLR HM ++PDYKYRPR+KPK + PN +SP + AP S S
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKMDPSAKPNAGQSPEKNAPGGGSKS 149
>MGI|MGI:98370 [details] [associations]
symbol:Sox8 "SRY-box containing gene 8" species:10090 "Mus
musculus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IDA] [GO:0001649
"osteoblast differentiation" evidence=IMP] [GO:0001701 "in utero
embryonic development" evidence=IGI] [GO:0001755 "neural crest cell
migration" evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IMP;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IMP;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IGI;IMP] [GO:0007422 "peripheral nervous system
development" evidence=IGI] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008584 "male gonad development"
evidence=IGI] [GO:0010628 "positive regulation of gene expression"
evidence=IGI] [GO:0010817 "regulation of hormone levels"
evidence=IMP] [GO:0014015 "positive regulation of gliogenesis"
evidence=IMP] [GO:0033690 "positive regulation of osteoblast
proliferation" evidence=IMP] [GO:0035914 "skeletal muscle cell
differentiation" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045165 "cell fate commitment"
evidence=IGI] [GO:0045444 "fat cell differentiation" evidence=IMP]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA;IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IGI] [GO:0048469 "cell
maturation" evidence=IGI;IMP] [GO:0048484 "enteric nervous system
development" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0060009 "Sertoli cell
development" evidence=IGI] [GO:0060018 "astrocyte fate commitment"
evidence=IGI] [GO:0060041 "retina development in camera-type eye"
evidence=IGI] [GO:0060221 "retinal rod cell differentiation"
evidence=IGI] [GO:0060612 "adipose tissue development"
evidence=IMP] [GO:0061138 "morphogenesis of a branching epithelium"
evidence=IGI] [GO:0072034 "renal vesicle induction" evidence=IMP]
[GO:0072197 "ureter morphogenesis" evidence=IGI] [GO:0072289
"metanephric nephron tubule formation" evidence=IGI] [GO:0090184
"positive regulation of kidney development" evidence=IGI]
[GO:0090190 "positive regulation of branching involved in ureteric
bud morphogenesis" evidence=IMP] InterPro:IPR009071 MGI:MGI:98370
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
GO:GO:0007165 GO:GO:0043066 GO:GO:0001755 GO:GO:0001701
GO:GO:0045944 GO:GO:0007422 GO:GO:0060612 GO:GO:0003700
GO:GO:0007283 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0060009 GO:GO:0090190
GO:GO:0001649 GO:GO:0045444 GO:GO:0035914 GO:GO:0000979
GO:GO:0048709 GO:GO:0048484 GO:GO:0010817 GO:GO:0048469
GO:GO:0033690 GO:GO:0045662 GO:GO:0046533 GO:GO:0060018
GO:GO:0014015 GO:GO:0072289 GO:GO:0072197 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 InterPro:IPR022151 Pfam:PF12444
CTD:30812 eggNOG:NOG324597 OrthoDB:EOG4ZKJMD OMA:DQSHGSP
ChiTaRS:SOX8 GO:GO:0061138 GO:GO:0072034 GO:GO:0060221
EMBL:AF191325 EMBL:BC085619 EMBL:Z18957 IPI:IPI00111141 PIR:S30246
RefSeq:NP_035577.1 UniGene:Mm.258220 ProteinModelPortal:Q04886
SMR:Q04886 IntAct:Q04886 STRING:Q04886 PhosphoSite:Q04886
PRIDE:Q04886 Ensembl:ENSMUST00000025003 GeneID:20681 KEGG:mmu:20681
InParanoid:Q04886 NextBio:299189 Bgee:Q04886 CleanEx:MM_SOX8
Genevestigator:Q04886 GermOnline:ENSMUSG00000024176 Uniprot:Q04886
Length = 464
Score = 131 (51.2 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 144 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 173
Score = 44 (20.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 140 TSAQTKTFSTPPPSHLSALFQHPTAASS 167
T Q + +P P + +L+Q+P SS
Sbjct: 402 TDLQASNYYSPYPGYPPSLYQYPYFHSS 429
>UNIPROTKB|Q9H6I2 [details] [associations]
symbol:SOX17 "Transcription factor SOX-17" species:9606
"Homo sapiens" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001828 "inner
cell mass cellular morphogenesis" evidence=IEA] [GO:0003308
"negative regulation of Wnt receptor signaling pathway involved in
heart development" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007493 "endodermal cell fate determination"
evidence=IEA] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0042074 "cell
migration involved in gastrulation" evidence=IEA] [GO:0042662
"negative regulation of mesodermal cell fate specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045597 "positive regulation of cell
differentiation" evidence=IEA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0048568 "embryonic
organ development" evidence=IEA] [GO:0048643 "positive regulation
of skeletal muscle tissue development" evidence=IEA] [GO:0048866
"stem cell fate specification" evidence=IEA] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=IEA] [GO:0061009 "common
bile duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0072091 "regulation of stem cell
proliferation" evidence=IEA] [GO:2000035 "regulation of stem cell
division" evidence=IEA] [GO:2000043 "regulation of cardiac cell
fate specification" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0001706 "endoderm formation" evidence=IDA]
[GO:0001947 "heart looping" evidence=ISS] [GO:0045995 "regulation
of embryonic development" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008013
"beta-catenin binding" evidence=IPI] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003151 "outflow tract morphogenesis" evidence=ISS] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0060956 "endocardial cell differentiation" evidence=ISS]
[GO:0060214 "endocardium formation" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0035050 "embryonic heart tube development" evidence=ISS]
[GO:0001570 "vasculogenesis" evidence=ISS] [GO:0001525
"angiogenesis" evidence=ISS] [GO:0005667 "transcription factor
complex" evidence=IDA] [GO:0060914 "heart formation" evidence=TAS]
[GO:0060913 "cardiac cell fate determination" evidence=IMP]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=ISS] [GO:0060807 "regulation of transcription from RNA
polymerase II promoter involved in definitive endodermal cell fate
specification" evidence=ISS] [GO:0048617 "embryonic foregut
morphogenesis" evidence=ISS] [GO:0003143 "embryonic heart tube
morphogenesis" evidence=ISS] [GO:0003142 "cardiogenic plate
morphogenesis" evidence=ISS] [GO:0072001 "renal system development"
evidence=IMP] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] InterPro:IPR009071
Pfam:PF00505 GO:GO:0050821 GO:GO:0030308 GO:GO:0043565
GO:GO:0045597 GO:GO:0045944 GO:GO:0007283 GO:GO:0001525
GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0003713 GO:GO:0001570 GO:GO:0090090 GO:GO:0001947
GO:GO:0045732 GO:GO:0042074 GO:GO:0003151 GO:GO:0060070
GO:GO:0060914 GO:GO:0042789 GO:GO:0048617 GO:GO:0021903
GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
GO:GO:0045995 GO:GO:0048643 GO:GO:2000035 GO:GO:0042662
GO:GO:0072001 GO:GO:0007493 GO:GO:0072091 GO:GO:0061031
GO:GO:0061009 GO:GO:0061010 GO:GO:0060913 GO:GO:0060956
GO:GO:0060214 eggNOG:NOG242943 Orphanet:289365 KO:K04495
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 EMBL:AB073988
EMBL:AK025905 IPI:IPI00007874 RefSeq:NP_071899.1 UniGene:Hs.98367
PDB:2YUL PDB:4A3N PDBsum:2YUL PDBsum:4A3N ProteinModelPortal:Q9H6I2
SMR:Q9H6I2 STRING:Q9H6I2 PhosphoSite:Q9H6I2 DMDM:23822216
PRIDE:Q9H6I2 DNASU:64321 Ensembl:ENST00000297316 GeneID:64321
KEGG:hsa:64321 UCSC:uc003xsb.4 CTD:64321 GeneCards:GC08P055370
H-InvDB:HIX0034521 HGNC:HGNC:18122 HPA:CAB025594 MIM:610928
MIM:613674 neXtProt:NX_Q9H6I2 PharmGKB:PA38296 HOGENOM:HOG000069999
HOVERGEN:HBG000517 InParanoid:Q9H6I2 OMA:ALPCRDG OrthoDB:EOG4KD6M5
PhylomeDB:Q9H6I2 EvolutionaryTrace:Q9H6I2 GenomeRNAi:64321
NextBio:66237 ArrayExpress:Q9H6I2 Bgee:Q9H6I2 CleanEx:HS_SOX17
Genevestigator:Q9H6I2 GermOnline:ENSG00000164736 GO:GO:0003142
GO:GO:0001828 GO:GO:2000043 GO:GO:0060807 GO:GO:0048866
Uniprot:Q9H6I2
Length = 414
Score = 152 (58.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 45/122 (36%), Positives = 59/122 (48%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKP------KTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P A P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGG 172
Query: 56 SNA-------FPS--FPL-PPYFANHGGGSHPHPLDSLSAAYPPMN---MPHYFGSPFDA 102
A FP FP PP H GG H SL A PP++ +P SP D
Sbjct: 173 RVAMDGLGLQFPEQGFPAGPPLLPPHMGG-HYRDCQSLGA--PPLDGYPLPTPDTSPLDG 229
Query: 103 MN 104
++
Sbjct: 230 VD 231
>UNIPROTKB|G3N274 [details] [associations]
symbol:Bt.30086 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] [GO:2000138 "positive regulation of
cell proliferation involved in heart morphogenesis" evidence=IEA]
[GO:2000020 "positive regulation of male gonad development"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0090103
"cochlea morphogenesis" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0072289 "metanephric nephron tubule formation"
evidence=IEA] [GO:0072197 "ureter morphogenesis" evidence=IEA]
[GO:0072190 "ureter urothelium development" evidence=IEA]
[GO:0072034 "renal vesicle induction" evidence=IEA] [GO:0071560
"cellular response to transforming growth factor beta stimulus"
evidence=IEA] [GO:0071504 "cellular response to heparin"
evidence=IEA] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0071300 "cellular response to
retinoic acid" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0070371 "ERK1 and ERK2
cascade" evidence=IEA] [GO:0061036 "positive regulation of
cartilage development" evidence=IEA] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IEA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=IEA] [GO:0060221 "retinal rod
cell differentiation" evidence=IEA] [GO:0060174 "limb bud
formation" evidence=IEA] [GO:0060018 "astrocyte fate commitment"
evidence=IEA] [GO:0060009 "Sertoli cell development" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] [GO:0035622 "intrahepatic bile
duct development" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0034236 "protein kinase A catalytic
subunit binding" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0030916 "otic vesicle formation" evidence=IEA] [GO:0030903
"notochord development" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0019933
"cAMP-mediated signaling" evidence=IEA] [GO:0019100 "male germ-line
sex determination" evidence=IEA] [GO:0014068 "positive regulation
of phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0014032
"neural crest cell development" evidence=IEA] [GO:0010634 "positive
regulation of epithelial cell migration" evidence=IEA] [GO:0010564
"regulation of cell cycle process" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003415 "chondrocyte hypertrophy"
evidence=IEA] [GO:0003413 "chondrocyte differentiation involved in
endochondral bone morphogenesis" evidence=IEA] [GO:0003203
"endocardial cushion morphogenesis" evidence=IEA] [GO:0003188
"heart valve formation" evidence=IEA] [GO:0002683 "negative
regulation of immune system process" evidence=IEA] [GO:0002053
"positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001502
"cartilage condensation" evidence=IEA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0001708 GO:GO:0007173
GO:GO:0045892 GO:GO:0043066 GO:GO:0006461 GO:GO:0030155
GO:GO:0071560 GO:GO:0019933 GO:GO:0070371 GO:GO:0071300
GO:GO:0030198 GO:GO:0014068 GO:GO:0007283 GO:GO:0003682
GO:GO:0003705 GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672
GO:GO:0071504 GO:GO:0001942 GO:GO:0032332 GO:GO:0060009
GO:GO:0090090 GO:GO:0071260 GO:GO:0035019 GO:GO:0001934
GO:GO:0090190 GO:GO:0071364 GO:GO:0031018 GO:GO:0043491
GO:GO:0014032 GO:GO:0001502 GO:GO:0045732 GO:GO:0001837
GO:GO:0050680 GO:GO:0001503 GO:GO:0001658 GO:GO:0071347
GO:GO:0001158 GO:GO:0030858 GO:GO:0048709 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0030879
GO:GO:0050679 GO:GO:0002053 GO:GO:0001046 GO:GO:0030502
GO:GO:2000138 GO:GO:0061036 GO:GO:0003203 GO:GO:0032331
GO:GO:0045662 GO:GO:0030916 GO:GO:2000020 GO:GO:0046533
GO:GO:0060174 GO:GO:0030903 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0060018 GO:GO:0035622 GO:GO:0072190
GO:GO:0072289 GO:GO:0072197 GO:GO:0003188
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 GO:GO:0003415
GO:GO:0060517 GO:GO:0060729 GO:GO:0002683 GO:GO:0060784
EMBL:DAAA02049654 EMBL:DAAA02049655 Ensembl:ENSBTAT00000063815
OMA:PEQTHIS Uniprot:G3N274
Length = 226
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + AP T S NA
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEAPEQTHISPNA 199
>UNIPROTKB|F6RRS7 [details] [associations]
symbol:SOX18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072091 "regulation of stem cell proliferation"
evidence=IEA] [GO:0061028 "establishment of endothelial barrier"
evidence=IEA] [GO:0060956 "endocardial cell differentiation"
evidence=IEA] [GO:0060836 "lymphatic endothelial cell
differentiation" evidence=IEA] [GO:0060214 "endocardium formation"
evidence=IEA] [GO:0048866 "stem cell fate specification"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043534 "blood vessel endothelial cell migration"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001946 "lymphangiogenesis" evidence=IEA]
[GO:0001942 "hair follicle development" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0045892 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0001942
GO:GO:0001946 GO:GO:0060836 GO:GO:0043534 GO:GO:0001570
GO:GO:0048469 GO:GO:0035050 GO:GO:0072091 GO:GO:0060956
GO:GO:0060214 GO:GO:0061028 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 GO:GO:0048866
OMA:YLNCSRT EMBL:DAAA02036216 EMBL:DAAA02036215 IPI:IPI00717042
Ensembl:ENSBTAT00000015485 Uniprot:F6RRS7
Length = 388
Score = 150 (57.9 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 36/90 (40%), Positives = 47/90 (52%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT------------PGQSIPNNKSPNQGA 49
EKRPF++EA+RLR H+++HP+YKYRPRRK + PG + P P +
Sbjct: 129 EKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKARRLEPGLLLPGLAPPPPPPPPEPF 188
Query: 50 PAPTSASNAFPSFPLPPYFANHGGGSHPHP 79
PA T + F LPP A G P P
Sbjct: 189 PAATGPARVFRE--LPPLGAEFDGLGLPTP 216
>UNIPROTKB|P48434 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008584 "male gonad
development" evidence=IEP] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEP] [GO:0003170 "heart valve
development" evidence=IEP] [GO:0071300 "cellular response to
retinoic acid" evidence=IEP] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0071300
GO:GO:0006351 GO:GO:0008584 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001658 GO:GO:0003170
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061
InterPro:IPR022151 Pfam:PF12444 OrthoDB:EOG4TXBRZ EMBL:U12533
IPI:IPI00589733 UniGene:Gga.890 ProteinModelPortal:P48434
SMR:P48434 STRING:P48434 InParanoid:P48434 Uniprot:P48434
Length = 494
Score = 134 (52.2 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQS 38
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS
Sbjct: 151 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKTVKNGQS 188
Score = 38 (18.4 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 9/23 (39%), Positives = 9/23 (39%)
Query: 152 PSHLSALFQHPTAASSHPSQFLY 174
PSH S QHP Q Y
Sbjct: 382 PSHNSEQQQHPEQQQQQQQQLGY 404
>UNIPROTKB|Q91731 [details] [associations]
symbol:sox11-a "Transcription factor Sox-11-A" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0007399 "nervous system
development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG005040 KO:K09268
InterPro:IPR017386 PIRSF:PIRSF038098 EMBL:D86076 EMBL:D83650
PIR:S72169 RefSeq:NP_001135834.1 UniGene:Xl.891 GeneID:100216330
KEGG:xla:100216330 CTD:100216330 Xenbase:XB-GENE-6252061
Uniprot:Q91731
Length = 382
Score = 148 (57.2 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 43/102 (42%), Positives = 56/102 (54%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT-PGQSI--PN-NKSPNQGAPAPTSASN 57
EK PFI EA+RLR HM ++PDYKYRPR+KPK P S P +SP + +P SA
Sbjct: 92 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKVDPSASSKPPALTQSPEK-SPKSRSAGR 150
Query: 58 AFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSP 99
P L P ++ G GS S+ + Y + + FGSP
Sbjct: 151 KCPK--LKP--SHSGSGSKSL---SIKSEYSGGSDEYVFGSP 185
>UNIPROTKB|F1NFP0 [details] [associations]
symbol:SOX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0043565 GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 InterPro:IPR021934
Pfam:PF12067 PROSITE:PS51516 GeneTree:ENSGT00670000097649
OMA:ECPALEA EMBL:AADN02018316 IPI:IPI00684202
Ensembl:ENSGALT00000026870 Uniprot:F1NFP0
Length = 397
Score = 122 (48.0 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 19/30 (63%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRP+++EA+RLR HM+++P+YKYRPRRK
Sbjct: 106 QKRPYVEEAERLRVKHMQDYPNYKYRPRRK 135
Score = 64 (27.6 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 24/81 (29%), Positives = 34/81 (41%)
Query: 32 PKTPGQSIPNNKSPNQGAPAPTSA----SNAFPSFPLPP---YFANHGGGSHPHPLDS-L 83
P+ G S+P N P P P S +++ P P PP Y+ HP L + L
Sbjct: 250 PEYAGSSLPCNHHPLSPMPQPNSCMIPPASSCPPLPPPPPPSYYTPAFPSLHPTSLHAHL 309
Query: 84 SAAYPPMNMPHYFGSPFDAMN 104
PP P + G FD ++
Sbjct: 310 GQLSPP---PDHHG--FDTLD 325
Score = 49 (22.3 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 150 PPPSHLSALFQ--HPTAASSHPSQ 171
PPPS+ + F HPT+ +H Q
Sbjct: 288 PPPSYYTPAFPSLHPTSLHAHLGQ 311
Score = 34 (17.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 135 LYPSVTSAQTKTFSTPPPSH 154
L+P+ A S PPP H
Sbjct: 300 LHPTSLHAHLGQLS-PPPDH 318
>UNIPROTKB|P40650 [details] [associations]
symbol:sox11-b "Transcription factor Sox-11-B" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0007399 "nervous system
development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG005040 KO:K09268
InterPro:IPR017386 PIRSF:PIRSF038098 EMBL:D87209 EMBL:BC070707
EMBL:X65656 PIR:S22948 RefSeq:NP_001084325.1 UniGene:Xl.78258
ProteinModelPortal:P40650 SMR:P40650 GeneID:399440 KEGG:xla:399440
CTD:399440 Xenbase:XB-GENE-483422 Uniprot:P40650
Length = 374
Score = 147 (56.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 42/101 (41%), Positives = 55/101 (54%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---TPGQSIPNNKSPNQGAPAPTSASNA 58
EK PFI EA+RLR HM ++PDYKYRPR+KPK T +S +SP + +P SA
Sbjct: 90 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKVDPTASKSPTLAQSPEK-SPKSRSAGKK 148
Query: 59 FPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSP 99
P L P +H G S S+ + Y + + FGSP
Sbjct: 149 CPK--LKP---SHSGNSSKSL--SIKSEYG-VGGDYVFGSP 181
>UNIPROTKB|Q3KQ35 [details] [associations]
symbol:sox17a-a "Transcription factor Sox-17-alpha-A"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=IDA]
[GO:0007440 "foregut morphogenesis" evidence=IMP] [GO:0007442
"hindgut morphogenesis" evidence=IMP] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0007494 "midgut development"
evidence=IMP] [GO:0008013 "beta-catenin binding" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0042074 "cell migration involved in gastrulation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0008285 GO:GO:0016055 GO:GO:0043565
GO:GO:0045944 GO:GO:0006351 GO:GO:0007494 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0090090
GO:GO:0008013 GO:GO:0042074 GO:GO:0007492 GO:GO:0007440
GO:GO:0007442 HSSP:P48431 EMBL:AJ001730 EMBL:BC106403 EMBL:AB052690
RefSeq:NP_001081631.1 UniGene:Xl.3831 ProteinModelPortal:Q3KQ35
SMR:Q3KQ35 GeneID:397966 KEGG:xla:397966 CTD:397966
Xenbase:XB-GENE-865067 KO:K04495 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 Uniprot:Q3KQ35
Length = 380
Score = 147 (56.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPF++EA+RLR HM++HP+YKYRPRR+ + N + ++ A
Sbjct: 106 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRMKRAENGFMHMAEAQESAVLGADGR 165
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAY--PPMNMPHYFG 97
L + + ++PH S+ Y P PHY G
Sbjct: 166 MCLENFSLGYHEQTYPHGQVPQSSHYREPQAVAPHYDG 203
>UNIPROTKB|P40667 [details] [associations]
symbol:P40667 "SRY-related protein CH3" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0000979 GO:GO:0001106 eggNOG:NOG321816
EMBL:M86322 IPI:IPI00601658 UniGene:Gga.3795
ProteinModelPortal:P40667 SMR:P40667 STRING:P40667
Ensembl:ENSGALT00000039603 GeneTree:ENSGT00690000101940
InParanoid:P40667 OrthoDB:EOG45MN6C ArrayExpress:P40667
Uniprot:P40667
Length = 54
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA+HMKE+PDYKYRP
Sbjct: 28 EKRPFIDEAKRLRAVHMKEYPDYKYRP 54
>ZFIN|ZDB-GENE-011207-1 [details] [associations]
symbol:sox10 "SRY-box containing gene 10"
species:7955 "Danio rerio" [GO:0014044 "Schwann cell development"
evidence=IMP] [GO:0048840 "otolith development" evidence=IMP]
[GO:0048839 "inner ear development" evidence=IGI;IMP] [GO:0048752
"semicircular canal morphogenesis" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IGI] [GO:0001755
"neural crest cell migration" evidence=IMP] [GO:0048484 "enteric
nervous system development" evidence=IMP] [GO:0010001 "glial cell
differentiation" evidence=IGI] [GO:0071600 "otic vesicle
morphogenesis" evidence=IMP] [GO:0030318 "melanocyte
differentiation" evidence=IGI] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0014037 "Schwann cell
differentiation" evidence=IMP] [GO:0050768 "negative regulation of
neurogenesis" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-011207-1 GO:GO:0001755 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0010628
GO:GO:0014044 GO:GO:0030318 GO:GO:0048709 GO:GO:0050768
GO:GO:0048484 GO:GO:0048840 GO:GO:0048752 GO:GO:0071600 CTD:6663
GeneTree:ENSGT00670000097649 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 OMA:GPSMASD InterPro:IPR022151
Pfam:PF12444 HSSP:P48432 EMBL:CU695115 EMBL:BC163868 EMBL:BC163883
EMBL:AF402677 IPI:IPI00512024 RefSeq:NP_571950.1 UniGene:Dr.83682
SMR:Q90XD1 STRING:Q90XD1 Ensembl:ENSDART00000112979 GeneID:140616
KEGG:dre:140616 NextBio:20797027 Uniprot:Q90XD1
Length = 485
Score = 127 (49.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 35/95 (36%), Positives = 47/95 (49%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK-TPGQSIPNNKSPNQGAPAPTSASNAFP 60
+KRPFI+EA+RLR H K++P+YKY+PRR+ PG S + + S S+ +
Sbjct: 153 DKRPFIEEAERLRKQHKKDYPEYKYQPRRRKNGKPGSS--SEADAHSEGEVSHSQSH-YK 209
Query: 61 SFPLPPYFANHGG-----GSHPHPL-DSLSAAYPP 89
S L G G HPH S S PP
Sbjct: 210 SLHLEVAHGGAAGSPLGDGHHPHATGQSHSPPTPP 244
Score = 43 (20.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 87 YPPMNMPHY---FGSPFDAMNFSKLVQGQTS 114
Y P+ +PHY F S F++ + Q S
Sbjct: 398 YTPLTLPHYSSAFPSLASRAQFAEYAEHQAS 428
>UNIPROTKB|P40670 [details] [associations]
symbol:P40670 "SRY-related protein CH31" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:M86323 IPI:IPI00575625
PIR:I50192 ProteinModelPortal:P40670 SMR:P40670 STRING:P40670
InParanoid:P40670 Uniprot:P40670
Length = 54
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 25/27 (92%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAMHMKE+P+YKYRP
Sbjct: 28 EKRPFIDEAKRLRAMHMKEYPNYKYRP 54
>MGI|MGI:98359 [details] [associations]
symbol:Sox11 "SRY-box containing gene 11" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=ISO] [GO:0001071 "nucleic
acid binding transcription factor activity" evidence=IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO;IDA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO;IDA] [GO:0001158 "enhancer sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0001841 "neural tube formation"
evidence=IMP] [GO:0002089 "lens morphogenesis in camera-type eye"
evidence=IMP] [GO:0003151 "outflow tract morphogenesis"
evidence=IMP] [GO:0003211 "cardiac ventricle formation"
evidence=IMP] [GO:0003357 "noradrenergic neuron differentiation"
evidence=ISO;IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006412
"translation" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=ISO] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0010628 "positive regulation
of gene expression" evidence=ISO;IMP] [GO:0010629 "negative
regulation of gene expression" evidence=ISO;IMP] [GO:0014009 "glial
cell proliferation" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0021510 "spinal cord development"
evidence=IMP] [GO:0021782 "glial cell development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030513
"positive regulation of BMP signaling pathway" evidence=IMP]
[GO:0035332 "positive regulation of hippo signaling cascade"
evidence=IMP] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IMP] [GO:0045666 "positive regulation of neuron
differentiation" evidence=ISO;IDA;IMP] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=ISO] [GO:0045778
"positive regulation of ossification" evidence=ISO;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IDA;IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0046887
"positive regulation of hormone secretion" evidence=IMP]
[GO:0048485 "sympathetic nervous system development" evidence=IMP]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0050672 "negative regulation of lymphocyte proliferation"
evidence=ISO] [GO:0050769 "positive regulation of neurogenesis"
evidence=IDA] [GO:0060022 "hard palate development" evidence=IMP]
[GO:0060023 "soft palate development" evidence=IMP] [GO:0060174
"limb bud formation" evidence=IMP] [GO:0060253 "negative regulation
of glial cell proliferation" evidence=ISO;IMP] [GO:0060412
"ventricular septum morphogenesis" evidence=IMP] [GO:0060425 "lung
morphogenesis" evidence=IMP] [GO:0060548 "negative regulation of
cell death" evidence=IMP] [GO:0060563 "neuroepithelial cell
differentiation" evidence=IMP] [GO:0061029 "eyelid development in
camera-type eye" evidence=IMP] [GO:0061053 "somite development"
evidence=IMP] [GO:0061303 "cornea development in camera-type eye"
evidence=IMP] [GO:0061386 "closure of optic fissure" evidence=IMP]
[GO:2000648 "positive regulation of stem cell proliferation"
evidence=ISO] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=ISO] [GO:2001111 "positive
regulation of lens epithelial cell proliferation" evidence=IMP]
InterPro:IPR009071 MGI:MGI:98359 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0008135 GO:GO:0003705 GO:GO:0001077
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0014009 GO:GO:0001822 GO:GO:0050769
GO:GO:0030513 GO:GO:0045669 GO:GO:0045666 GO:GO:0060548
GO:GO:0021510 GO:GO:0014032 GO:GO:0048704 GO:GO:0001105
GO:GO:0035914 GO:GO:0000979 GO:GO:0061303 GO:GO:0061029
GO:GO:0003151 GO:GO:0048485 GO:GO:0001158 GO:GO:0014003
GO:GO:0060563 GO:GO:0045778 GO:GO:0001841 GO:GO:0017015
GO:GO:0002089 GO:GO:0060412 GO:GO:0046887 GO:GO:0060174
GO:GO:0060023 GO:GO:0060022 GO:GO:2000648 GO:GO:0060253
GO:GO:0048557 GO:GO:0060425 GO:GO:0061386 GO:GO:0050672
GO:GO:2000678 GO:GO:0021782 GO:GO:0003357 GO:GO:0061053
GO:GO:0003211 CTD:6664 HOVERGEN:HBG005040 KO:K09268
InterPro:IPR017386 PIRSF:PIRSF038098 eggNOG:NOG130659
HOGENOM:HOG000231874 OMA:TEEGEFM OrthoDB:EOG4QVCCX ChiTaRS:SOX11
GO:GO:0035332 GO:GO:2001111 GO:GO:0072404 EMBL:AF009414
EMBL:AB108675 EMBL:BK001484 EMBL:AK165693 EMBL:AK146514
EMBL:BC062095 EMBL:Z18960 IPI:IPI00556698 RefSeq:NP_033260.4
UniGene:Mm.41702 UniGene:Mm.466344 ProteinModelPortal:Q7M6Y2
SMR:Q7M6Y2 STRING:Q7M6Y2 PhosphoSite:Q7M6Y2 PRIDE:Q7M6Y2
Ensembl:ENSMUST00000079063 GeneID:20666 KEGG:mmu:20666
UCSC:uc007nfn.2 GeneTree:ENSGT00690000101789 InParanoid:Q7M6Y2
NextBio:299129 Bgee:Q7M6Y2 CleanEx:MM_SOX11 Genevestigator:Q7M6Y2
GermOnline:ENSMUSG00000063632 Uniprot:Q7M6Y2
Length = 395
Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN-NKSPNQGAPAPTSA 55
EK PFI EA+RLR HM ++PDYKYRPR+KPKT + P+ +SP++ A +A
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKTDPAAKPSAGQSPDKSAAGAKAA 148
>RGD|69351 [details] [associations]
symbol:Sox11 "SRY (sex determining region Y)-box 11" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=ISO;ISS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO;IDA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO;IDA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISO;ISS] [GO:0001501
"skeletal system development" evidence=ISO;ISS] [GO:0001822 "kidney
development" evidence=IEP] [GO:0001841 "neural tube formation"
evidence=ISO;ISS] [GO:0002089 "lens morphogenesis in camera-type
eye" evidence=ISO;ISS] [GO:0003151 "outflow tract morphogenesis"
evidence=ISO;ISS] [GO:0003211 "cardiac ventricle formation"
evidence=ISO;ISS] [GO:0003357 "noradrenergic neuron differentiation"
evidence=ISO;IMP] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006412 "translation" evidence=ISO]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=ISO;ISS] [GO:0008283 "cell proliferation" evidence=IEP]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;ISS] [GO:0010628 "positive regulation of gene
expression" evidence=ISO;ISS] [GO:0010629 "negative regulation of
gene expression" evidence=ISO;ISS] [GO:0014003 "oligodendrocyte
development" evidence=IEP] [GO:0014009 "glial cell proliferation"
evidence=ISO;ISS] [GO:0014032 "neural crest cell development"
evidence=ISO;ISS] [GO:0017015 "regulation of transforming growth
factor beta receptor signaling pathway" evidence=IEA;ISO]
[GO:0021510 "spinal cord development" evidence=ISO;ISS] [GO:0021782
"glial cell development" evidence=ISO;ISS] [GO:0030182 "neuron
differentiation" evidence=ISO] [GO:0030513 "positive regulation of
BMP signaling pathway" evidence=ISO;ISS] [GO:0035332 "positive
regulation of hippo signaling cascade" evidence=ISO;ISS] [GO:0035914
"skeletal muscle cell differentiation" evidence=ISO] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISO;ISS]
[GO:0045669 "positive regulation of osteoblast differentiation"
evidence=ISO;ISS] [GO:0045778 "positive regulation of ossification"
evidence=ISO;ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IMP]
[GO:0046887 "positive regulation of hormone secretion"
evidence=ISO;ISS] [GO:0048485 "sympathetic nervous system
development" evidence=ISO;ISS] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=ISO;ISS] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO;ISS] [GO:0050672
"negative regulation of lymphocyte proliferation" evidence=IEA;ISO]
[GO:0050769 "positive regulation of neurogenesis" evidence=ISO;ISS]
[GO:0060022 "hard palate development" evidence=ISO;ISS] [GO:0060023
"soft palate development" evidence=ISO;ISS] [GO:0060174 "limb bud
formation" evidence=ISO;ISS] [GO:0060253 "negative regulation of
glial cell proliferation" evidence=ISO;ISS] [GO:0060412 "ventricular
septum morphogenesis" evidence=ISO;ISS] [GO:0060425 "lung
morphogenesis" evidence=ISO;ISS] [GO:0060548 "negative regulation of
cell death" evidence=ISO;ISS] [GO:0060563 "neuroepithelial cell
differentiation" evidence=ISO;ISS] [GO:0061029 "eyelid development
in camera-type eye" evidence=ISO;ISS] [GO:0061053 "somite
development" evidence=ISO;ISS] [GO:0061303 "cornea development in
camera-type eye" evidence=ISO;ISS] [GO:0061386 "closure of optic
fissure" evidence=ISO;ISS] [GO:0072395 "signal transduction involved
in cell cycle checkpoint" evidence=ISO] [GO:2000648 "positive
regulation of stem cell proliferation" evidence=ISO;ISS] [GO:2000678
"negative regulation of transcription regulatory region DNA binding"
evidence=IMP] [GO:2001111 "positive regulation of lens epithelial
cell proliferation" evidence=ISO;ISS] InterPro:IPR009071
Pfam:PF00505 RGD:69351 GO:GO:0005634 GO:GO:0005737 GO:GO:0008135
GO:GO:0001077 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0014009 GO:GO:0001822
GO:GO:0050769 GO:GO:0030513 GO:GO:0045669 GO:GO:0045666
GO:GO:0060548 GO:GO:0021510 GO:GO:0014032 GO:GO:0048704
GO:GO:0001105 GO:GO:0000979 GO:GO:0061303 GO:GO:0061029
GO:GO:0003151 GO:GO:0048485 GO:GO:0001158 GO:GO:0014003
GO:GO:0060563 GO:GO:0045778 GO:GO:0001841 GO:GO:0017015
GO:GO:0002089 GO:GO:0060412 GO:GO:0046887 GO:GO:0060174
GO:GO:0060023 GO:GO:0060022 GO:GO:2000648 GO:GO:0060253
GO:GO:0048557 GO:GO:0060425 GO:GO:0061386 GO:GO:0050672
GO:GO:2000678 GO:GO:0003357 GO:GO:0061053 GO:GO:0003211 CTD:6664
HOVERGEN:HBG005040 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
eggNOG:NOG130659 HOGENOM:HOG000231874 OMA:TEEGEFM OrthoDB:EOG4QVCCX
GO:GO:0035332 GO:GO:2001111 GO:GO:0072404
GeneTree:ENSGT00690000101789 EMBL:AJ004858 IPI:IPI00202666
RefSeq:NP_445801.1 UniGene:Rn.162854 ProteinModelPortal:P0C1G9
SMR:P0C1G9 STRING:P0C1G9 Ensembl:ENSRNOT00000045963 GeneID:84046
KEGG:rno:84046 InParanoid:P0C1G9 NextBio:616629
Genevestigator:P0C1G9 Uniprot:P0C1G9
Length = 395
Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN-NKSPNQGAPAPTSA 55
EK PFI EA+RLR HM ++PDYKYRPR+KPKT + P+ +SP++ A +A
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKTDPAAKPSAGQSPDKSAAGAKAA 148
>UNIPROTKB|P40666 [details] [associations]
symbol:P40666 "SRY-related protein CH2" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816 EMBL:M86321
IPI:IPI00594121 PIR:I50191 ProteinModelPortal:P40666 SMR:P40666
STRING:P40666 InParanoid:P40666 Uniprot:P40666
Length = 54
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRA HMKE+PDYKYRP
Sbjct: 28 EKRPFIDEAKRLRASHMKEYPDYKYRP 54
>UNIPROTKB|P40668 [details] [associations]
symbol:P40668 "SRY-related protein CH4" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:M86325 IPI:IPI00600355
PIR:I50195 ProteinModelPortal:P40668 SMR:P40668 STRING:P40668
InParanoid:P40668 Uniprot:P40668
Length = 54
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 24/27 (88%), Positives = 27/27 (100%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFID++KRLRAMHMKE+PDYKYRP
Sbjct: 28 EKRPFIDDSKRLRAMHMKEYPDYKYRP 54
>MGI|MGI:98369 [details] [associations]
symbol:Sox7 "SRY-box containing gene 7" species:10090 "Mus
musculus" [GO:0001706 "endoderm formation" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0060828 "regulation
of canonical Wnt receptor signaling pathway" evidence=ISO]
InterPro:IPR009071 MGI:MGI:98369 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0043565 GO:GO:0003705
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 eggNOG:NOG242943 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 KO:K09270 HOGENOM:HOG000069999 HOVERGEN:HBG000517
CTD:83595 OrthoDB:EOG447FTC EMBL:AB023419 EMBL:X65660
IPI:IPI00112869 PIR:S22945 RefSeq:NP_035576.1 UniGene:Mm.42162
ProteinModelPortal:P40646 SMR:P40646 STRING:P40646
PhosphoSite:P40646 PRIDE:P40646 Ensembl:ENSMUST00000079652
GeneID:20680 KEGG:mmu:20680 InParanoid:P40646 OMA:ECPALEA
NextBio:299185 Bgee:P40646 CleanEx:MM_SOX7 Genevestigator:P40646
GermOnline:ENSMUSG00000063060 Uniprot:P40646
Length = 380
Score = 126 (49.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRP++DEA+RLR HM+++P+YKYRPRRK
Sbjct: 90 QKRPYVDEAERLRLQHMQDYPNYKYRPRRK 119
Score = 48 (22.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 27/101 (26%), Positives = 41/101 (40%)
Query: 34 TPGQSIPNNKSP-NQGAPAPTSASNAFP-SFPLPP-------------YFAN-----HGG 73
+PG ++P S +GA A + + +P P PP +F++ HG
Sbjct: 163 SPGATLPGLHSCYREGAAAAPGSVDTYPYGLPTPPEMSPLDALEPEQTFFSSSCQEEHG- 221
Query: 74 GSHPHPLDSLSAAYPPMNMPHYFGSPFDAMN-FSKLVQGQT 113
HPH L L PP + P + SP + L GQ+
Sbjct: 222 --HPHHLPHLPG--PPYS-PEFTPSPLHCSHPLGSLALGQS 257
>UNIPROTKB|Q28GD5 [details] [associations]
symbol:sox7 "Transcription factor Sox-7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0001706 "endoderm formation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0007507
"heart development" evidence=ISS] [GO:0043565 "sequence-specific
DNA binding" evidence=ISS] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048793 "pronephros development" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007507
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0001570 GO:GO:0048793 GO:GO:0001706 eggNOG:NOG242943
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 KO:K09270 HOGENOM:HOG000069999
CTD:83595 OrthoDB:EOG447FTC EMBL:CR761431 EMBL:BC170859
RefSeq:NP_001016326.1 UniGene:Str.66419 ProteinModelPortal:Q28GD5
SMR:Q28GD5 STRING:Q28GD5 Ensembl:ENSXETT00000001530 GeneID:549080
KEGG:xtr:549080 Xenbase:XB-GENE-488067 OMA:SFECSAG Bgee:Q28GD5
Uniprot:Q28GD5
Length = 362
Score = 123 (48.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 19/30 (63%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRP+++EA+RLR HM+++P+YKYRPRRK
Sbjct: 87 QKRPYVEEAERLRVQHMQDYPNYKYRPRRK 116
Score = 57 (25.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 50 PAPTSASNAFPSFP-LPP-YFANHGGGSHPHPLDSLSAAYPPMNMPHY 95
P P + S+ P P PP Y+++ H + L PP PHY
Sbjct: 242 PIPQTGSSMIPPVPNCPPAYYSSTYHSIHHNYHAHLGQLSPPPEHPHY 289
>UNIPROTKB|F1RSI1 [details] [associations]
symbol:SOX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000043 "regulation of cardiac cell fate specification"
evidence=IEA] [GO:2000035 "regulation of stem cell division"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0072091 "regulation
of stem cell proliferation" evidence=IEA] [GO:0072001 "renal system
development" evidence=IEA] [GO:0061031 "endodermal digestive tract
morphogenesis" evidence=IEA] [GO:0061010 "gall bladder development"
evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0060956 "endocardial cell differentiation"
evidence=IEA] [GO:0060913 "cardiac cell fate determination"
evidence=IEA] [GO:0060807 "regulation of transcription from RNA
polymerase II promoter involved in definitive endodermal cell fate
specification" evidence=IEA] [GO:0060214 "endocardium formation"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0048866 "stem cell fate specification"
evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
tissue development" evidence=IEA] [GO:0048617 "embryonic foregut
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045597 "positive regulation of cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042662 "negative
regulation of mesodermal cell fate specification" evidence=IEA]
[GO:0042074 "cell migration involved in gastrulation" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007493 "endodermal cell fate determination" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003308 "negative
regulation of Wnt receptor signaling pathway involved in heart
development" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003142 "cardiogenic plate
morphogenesis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001828 "inner cell mass cellular morphogenesis"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0050821
GO:GO:0030308 GO:GO:0043565 GO:GO:0045597 GO:GO:0045944
GO:GO:0007283 GO:GO:0001525 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0003713 GO:GO:0001570
GO:GO:0090090 GO:GO:0001947 GO:GO:0045732 GO:GO:0042074
GO:GO:0003151 GO:GO:0060070 GO:GO:0048617 GO:GO:0021903
GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
GO:GO:0048643 GO:GO:2000035 GO:GO:0042662 GO:GO:0072001
GO:GO:0007493 GO:GO:0072091 GO:GO:0061031 GO:GO:0061009
GO:GO:0061010 GO:GO:0060913 GO:GO:0060956 GO:GO:0060214 KO:K04495
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 OMA:ALPCRDG GO:GO:0003142
GO:GO:0001828 GO:GO:2000043 GO:GO:0060807 GO:GO:0048866
EMBL:CU463866 RefSeq:XP_001928411.1 Ensembl:ENSSSCT00000006855
GeneID:100154087 KEGG:ssc:100154087 Uniprot:F1RSI1
Length = 407
Score = 145 (56.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 44/121 (36%), Positives = 59/121 (48%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-----------GQSIPNNKS--PNQG 48
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P + P+ G
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPPATALGPDGG 172
Query: 49 APAPTSASNAFPS--FPL-PPYFANHGGGSHPHPLDSLSAAYPPMN---MPHYFGSPFDA 102
A FP FP PP H GG H L A PP++ +P SP D
Sbjct: 173 RVAMDGLGLPFPEQGFPAGPPLLPPHMGG-HYRDCQGLGA--PPLDGYPLPTPDTSPLDG 229
Query: 103 M 103
+
Sbjct: 230 V 230
>UNIPROTKB|P40665 [details] [associations]
symbol:P40665 "SRY-related protein CH1" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:M86320 IPI:IPI00574315
PIR:I50190 ProteinModelPortal:P40665 SMR:P40665 STRING:P40665
eggNOG:NOG321816 InParanoid:P40665 OrthoDB:EOG4MPHQV Uniprot:P40665
Length = 54
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKR RAMHMKE+PDYKYRP
Sbjct: 28 EKRPFIDEAKRHRAMHMKEYPDYKYRP 54
>UNIPROTKB|Q8AWH3 [details] [associations]
symbol:sox17a "Transcription factor Sox-17-alpha"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007492 "endoderm development" evidence=ISS]
[GO:0008013 "beta-catenin binding" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0016055 GO:GO:0043565
GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0070121 GO:GO:0008013
GO:GO:0007492 GO:GO:0007369 GO:GO:0061371 HSSP:P48431
eggNOG:NOG242943 KO:K04495 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 HOGENOM:HOG000069999
OrthoDB:EOG4KD6M5 EMBL:AY157635 EMBL:AC148408 EMBL:CR848309
EMBL:BC074527 RefSeq:NP_989425.1 UniGene:Str.114
ProteinModelPortal:Q8AWH3 SMR:Q8AWH3 STRING:Q8AWH3
Ensembl:ENSXETT00000053697 GeneID:395066 KEGG:xtr:395066 CTD:395066
Xenbase:XB-GENE-484295 InParanoid:Q8AWH3 OMA:FNGHEAN Bgee:Q8AWH3
GO:GO:0035469 Uniprot:Q8AWH3
Length = 383
Score = 144 (55.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 32/98 (32%), Positives = 49/98 (50%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPF++EA+RLR HM++HP+YKYRPRR+ + + + P ++
Sbjct: 106 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRMKRADTGFMHMAEPPESAVLGTDGR 165
Query: 62 FPLPPYFANHGGGSHPHPLDSLSAAY-PPMNM-PHYFG 97
L + + ++PH + Y P M PHY G
Sbjct: 166 MCLESFSLGYHEQTYPHSQLPQGSHYREPQAMAPHYDG 203
>RGD|1310038 [details] [associations]
symbol:Sox7 "SRY (sex determining region Y)-box 7" species:10116
"Rattus norvegicus" [GO:0001706 "endoderm formation"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0043280
"positive regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0060828
"regulation of canonical Wnt receptor signaling pathway"
evidence=IEA;ISO] InterPro:IPR009071 Pfam:PF00505 RGD:1310038
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0043565
GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270 CTD:83595
OrthoDB:EOG447FTC OMA:ECPALEA EMBL:CH474023 IPI:IPI00373062
RefSeq:NP_001099515.1 UniGene:Rn.17732 Ensembl:ENSRNOT00000016503
GeneID:290317 KEGG:rno:290317 UCSC:RGD:1310038 NextBio:630913
Uniprot:D3ZTE1
Length = 383
Score = 126 (49.4 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRP++DEA+RLR HM+++P+YKYRPRRK
Sbjct: 90 QKRPYVDEAERLRLQHMQDYPNYKYRPRRK 119
Score = 47 (21.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 21/72 (29%), Positives = 28/72 (38%)
Query: 48 GAPAPTSASNAFPSFPLPPYFAN-----HGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDA 102
G P P S P +F++ HG HPH L L PP + P + SP
Sbjct: 195 GLPTPPEMSPLDALEPEQTFFSSSCQEEHG---HPHHLPHLPG--PPYS-PEFTPSPLHC 248
Query: 103 MN-FSKLVQGQT 113
+ L GQ+
Sbjct: 249 SHPLGSLALGQS 260
>UNIPROTKB|P40669 [details] [associations]
symbol:P40669 "SRY-related protein CH7" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:M86327 IPI:IPI00588027
PIR:I50197 ProteinModelPortal:P40669 SMR:P40669 STRING:P40669
InParanoid:P40669 Uniprot:P40669
Length = 54
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRPFIDEAKRLRAM MKE+PDYKYRP
Sbjct: 28 EKRPFIDEAKRLRAMRMKEYPDYKYRP 54
>MGI|MGI:107543 [details] [associations]
symbol:Sox17 "SRY-box containing gene 17" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0001525
"angiogenesis" evidence=IGI] [GO:0001570 "vasculogenesis"
evidence=IGI] [GO:0001706 "endoderm formation" evidence=ISO]
[GO:0001828 "inner cell mass cellular morphogenesis" evidence=IMP]
[GO:0001947 "heart looping" evidence=IMP] [GO:0003142 "cardiogenic
plate morphogenesis" evidence=IMP] [GO:0003143 "embryonic heart
tube morphogenesis" evidence=IMP] [GO:0003151 "outflow tract
morphogenesis" evidence=IGI] [GO:0003308 "negative regulation of
Wnt receptor signaling pathway involved in heart development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IDA] [GO:0007369 "gastrulation"
evidence=IMP] [GO:0007492 "endoderm development" evidence=IMP]
[GO:0007493 "endodermal cell fate determination" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0010628 "positive
regulation of gene expression" evidence=IMP] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IMP] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IDA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=IDA;IMP] [GO:0030308 "negative
regulation of cell growth" evidence=ISO] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0035050 "embryonic heart tube
development" evidence=IGI] [GO:0042074 "cell migration involved in
gastrulation" evidence=IMP] [GO:0042661 "regulation of mesodermal
cell fate specification" evidence=IMP] [GO:0042662 "negative
regulation of mesodermal cell fate specification" evidence=IMP]
[GO:0042789 "mRNA transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0045595 "regulation of cell
differentiation" evidence=IMP] [GO:0045597 "positive regulation of
cell differentiation" evidence=IMP;IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0045995 "regulation
of embryonic development" evidence=IMP] [GO:0048568 "embryonic
organ development" evidence=IMP] [GO:0048617 "embryonic foregut
morphogenesis" evidence=IMP] [GO:0048643 "positive regulation of
skeletal muscle tissue development" evidence=IDA] [GO:0048863 "stem
cell differentiation" evidence=IMP] [GO:0048866 "stem cell fate
specification" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=ISO] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IDA] [GO:0060214 "endocardium formation"
evidence=IGI] [GO:0060807 "regulation of transcription from RNA
polymerase II promoter involved in definitive endodermal cell fate
specification" evidence=IMP] [GO:0060913 "cardiac cell fate
determination" evidence=ISO] [GO:0060956 "endocardial cell
differentiation" evidence=IGI] [GO:0061009 "common bile duct
development" evidence=IMP] [GO:0061010 "gall bladder development"
evidence=IMP] [GO:0061031 "endodermal digestive tract
morphogenesis" evidence=IMP] [GO:0072001 "renal system development"
evidence=ISO] [GO:0072091 "regulation of stem cell proliferation"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISO] [GO:2000035 "regulation
of stem cell division" evidence=IMP] [GO:2000043 "regulation of
cardiac cell fate specification" evidence=IMP] InterPro:IPR009071
MGI:MGI:107543 Pfam:PF00505 GO:GO:0005634 GO:GO:0050821
GO:GO:0030308 GO:GO:0043565 GO:GO:0045597 GO:GO:0045944
GO:GO:0007283 GO:GO:0001525 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0003713 GO:GO:0001570
GO:GO:0090090 GO:GO:0001947 GO:GO:0045732 GO:GO:0042074
GO:GO:0003151 GO:GO:0060070 GO:GO:0048617 GO:GO:0021903
GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
GO:GO:0048643 GO:GO:2000035 GO:GO:0042662 GO:GO:0072001
GO:GO:0007493 GO:GO:0072091 GO:GO:0061031 GO:GO:0061009
GO:GO:0061010 GO:GO:0060913 GO:GO:0060956 GO:GO:0060214
eggNOG:NOG242943 KO:K04495 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 CTD:64321
HOGENOM:HOG000069999 HOVERGEN:HBG000517 OMA:ALPCRDG
OrthoDB:EOG4KD6M5 GO:GO:0003142 GO:GO:0001828 GO:GO:2000043
GO:GO:0060807 GO:GO:0048866 EMBL:D49474 EMBL:D49473 EMBL:AK004781
EMBL:L29085 IPI:IPI00121298 IPI:IPI00230012 RefSeq:NP_035571.1
UniGene:Mm.279103 PDB:3F27 PDBsum:3F27 ProteinModelPortal:Q61473
SMR:Q61473 STRING:Q61473 PhosphoSite:Q61473 PRIDE:Q61473
DNASU:20671 Ensembl:ENSMUST00000027035 Ensembl:ENSMUST00000116652
GeneID:20671 KEGG:mmu:20671 UCSC:uc007aey.1 UCSC:uc007afb.1
InParanoid:Q61473 NextBio:299151 Bgee:Q61473 CleanEx:MM_SOX17
Genevestigator:Q61473 GermOnline:ENSMUSG00000025902 Uniprot:Q61473
Length = 419
Score = 143 (55.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 40/100 (40%), Positives = 50/100 (50%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKP------KTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P GA P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRMKRVEGGFLHALVEPQAGALGPEGG 172
Query: 56 SNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHY 95
A LP F G + P PL S P M PHY
Sbjct: 173 RVAMDGLGLP--FPEPGYPAGP-PLMS-----PHMG-PHY 203
>UNIPROTKB|O42342 [details] [associations]
symbol:sox7 "Transcription factor Sox-7" species:8355
"Xenopus laevis" [GO:0001706 "endoderm formation" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007507 "heart development"
evidence=IMP] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0048793 "pronephros development" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007507
GO:GO:0030154 GO:GO:0043565 GO:GO:0045944 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0030178 GO:GO:0048793 GO:GO:0001706 HSSP:P48431
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 KO:K09270 CTD:83595
EMBL:D83649 RefSeq:NP_001079337.1 UniGene:Xl.1241
ProteinModelPortal:O42342 SMR:O42342 GeneID:378665 KEGG:xla:378665
Xenbase:XB-GENE-865761 Uniprot:O42342
Length = 362
Score = 123 (48.4 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 19/30 (63%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRP+++EA+RLR HM+++P+YKYRPRRK
Sbjct: 87 QKRPYVEEAERLRVQHMQDYPNYKYRPRRK 116
Score = 54 (24.1 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 19/51 (37%), Positives = 23/51 (45%)
Query: 50 PAPTSASNAFPSFPL-PP-YFAN--HG-GGSHPHPLDSLSAAYPPMNMPHY 95
P P S+ P P PP Y+++ H H H L LS PP PHY
Sbjct: 243 PIPQPGSSMIPPVPTCPPAYYSSSYHSIHNYHAH-LGQLS---PPPEHPHY 289
>UNIPROTKB|Q9BT81 [details] [associations]
symbol:SOX7 "Transcription factor SOX-7" species:9606 "Homo
sapiens" [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0060828 "regulation of canonical
Wnt receptor signaling pathway" evidence=IDA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0001706 "endoderm formation" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0008285
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0043280
GO:GO:0060828 GO:GO:0001706 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 KO:K09270 HOGENOM:HOG000069999 HOVERGEN:HBG000517
EMBL:AJ409320 EMBL:AK055556 EMBL:BT006693 EMBL:BC071947
IPI:IPI00027779 RefSeq:NP_113627.1 UniGene:Hs.709543
ProteinModelPortal:Q9BT81 SMR:Q9BT81 MINT:MINT-1186658
STRING:Q9BT81 PhosphoSite:Q9BT81 DMDM:20532272 PRIDE:Q9BT81
DNASU:83595 Ensembl:ENST00000304501 GeneID:83595 KEGG:hsa:83595
UCSC:uc003wtf.3 CTD:83595 GeneCards:GC08M010618 HGNC:HGNC:18196
HPA:HPA009065 MIM:612202 neXtProt:NX_Q9BT81 PharmGKB:PA38307
InParanoid:Q9BT81 OrthoDB:EOG447FTC PhylomeDB:Q9BT81 ChiTaRS:SOX7
GenomeRNAi:83595 NextBio:72529 ArrayExpress:Q9BT81 Bgee:Q9BT81
CleanEx:HS_SOX7 Genevestigator:Q9BT81 GermOnline:ENSG00000171056
Uniprot:Q9BT81
Length = 388
Score = 126 (49.4 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRP++DEA+RLR HM+++P+YKYRPRRK
Sbjct: 90 QKRPYVDEAERLRLQHMQDYPNYKYRPRRK 119
Score = 44 (20.5 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 23/76 (30%), Positives = 29/76 (38%)
Query: 28 PRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPSFPL---PPY-FANHGGGSHPHPLDSL 83
PRR P PG SP AP+P S+ S L P + G P P
Sbjct: 231 PRRIPHLPGHPY----SPEY-APSPLHCSHPLGSLALGQSPGVSMMSPVPGCPPSPAYYS 285
Query: 84 SAAYPPM--NMPHYFG 97
A Y P+ N+ + G
Sbjct: 286 PATYHPLHSNLQAHLG 301
Score = 39 (18.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 17/67 (25%), Positives = 23/67 (34%)
Query: 48 GAPAPTSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMN-FS 106
G P P S P +F++ H HP P + P Y SP +
Sbjct: 200 GLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGHPYS-PEYAPSPLHCSHPLG 258
Query: 107 KLVQGQT 113
L GQ+
Sbjct: 259 SLALGQS 265
Score = 39 (18.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/75 (26%), Positives = 29/75 (38%)
Query: 38 SIPNNKSPNQGAPAPTSASNAF-PSFPLPP----YF---ANHGGGSHPHPLDSLSAAYP- 88
++P +S ++GA + P LP Y A GGG P +D+ P
Sbjct: 144 ALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHEGPAGGGGGGTPSSVDTYPYGLPT 203
Query: 89 PMNMPHYFGSPFDAM 103
P M SP D +
Sbjct: 204 PPEM-----SPLDVL 213
>UNIPROTKB|I3LU29 [details] [associations]
symbol:SOX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060828 "regulation of canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001706 "endoderm formation"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0043565 GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0043280
GO:GO:0060828 GO:GO:0001706 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270 CTD:83595
OMA:ECPALEA EMBL:CT737360 RefSeq:XP_003359100.1
Ensembl:ENSSSCT00000023754 GeneID:100155811 KEGG:ssc:100155811
Uniprot:I3LU29
Length = 389
Score = 126 (49.4 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRP++DEA+RLR HM+++P+YKYRPRRK
Sbjct: 90 QKRPYVDEAERLRLQHMQDYPNYKYRPRRK 119
Score = 44 (20.5 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 56 SNAFPSFPLPPYFANHGGGS-H-PHPLDSLS 84
S P P PPY + H HPL SL+
Sbjct: 232 SRRIPHLPGPPYSPEYAPSPLHCGHPLGSLA 262
Score = 40 (19.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 20/76 (26%), Positives = 28/76 (36%)
Query: 38 SIPNNKSPNQGAPAPTSASNAF-PSFPLPPY---F-----ANHGGGSHPHPLDSLSAAYP 88
++P +S +GAP + P LP F GGG P +D+ P
Sbjct: 144 ALPEKRSGGRGAPGEKEDRGEYSPGSALPGLRGCFHEGPAGGSGGGGTPGSVDTYPYGLP 203
Query: 89 -PMNMPHYFGSPFDAM 103
P M SP D +
Sbjct: 204 TPPEM-----SPLDVL 214
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 19/67 (28%), Positives = 24/67 (35%)
Query: 29 RRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPSFPLPPY----FANHGGGSHPHPLDSLS 84
RR P PG SP AP+P + S L + G P P
Sbjct: 233 RRIPHLPGPPY----SPEY-APSPLHCGHPLGSLALGQSSGVSMMSTVPGCPPSPAYYSP 287
Query: 85 AAYPPMN 91
A YPP++
Sbjct: 288 ATYPPLH 294
>UNIPROTKB|Q03255 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9913
"Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:2000020 "positive regulation of male
gonad development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007548 "sex
differentiation" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005737 GO:GO:0007423 GO:GO:0016607
GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009 GO:GO:0060324
GO:GO:0021983 GO:GO:0000979 GO:GO:0001106 GO:GO:0021854
GO:GO:0048515 GeneTree:ENSGT00690000101940 GO:GO:2000020
GO:GO:0030238 EMBL:Z30327 EMBL:U15569 EMBL:AB039748 EMBL:DQ336526
EMBL:EU233320 EMBL:EU294189 EMBL:Z18808 EMBL:S71489 IPI:IPI00716700
PIR:S34113 RefSeq:NP_001014407.1 UniGene:Bt.90486
ProteinModelPortal:Q03255 SMR:Q03255 Ensembl:ENSBTAT00000062957
GeneID:280931 KEGG:bta:280931 CTD:6736 HOVERGEN:HBG008712 KO:K09266
OMA:QSYASAM NextBio:20805048 PANTHER:PTHR10270:SF48 Uniprot:Q03255
Length = 229
Score = 135 (52.6 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKS 44
EKRPF +EA+RL A+H ++P YKYRPRR+ K P +S+P + S
Sbjct: 99 EKRPFFEEAQRLLAIHRDKYPGYKYRPRRRAKRPQKSLPADSS 141
>ZFIN|ZDB-GENE-980526-466 [details] [associations]
symbol:sox11b "SRY-box containing gene 11b"
species:7955 "Danio rerio" [GO:0009611 "response to wounding"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-980526-466
GO:GO:0009611 GO:GO:0030182 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG005040
InterPro:IPR017386 PIRSF:PIRSF038098 HSSP:P48432 EMBL:U85091
IPI:IPI00486894 UniGene:Dr.77148 ProteinModelPortal:Q9YH22
SMR:Q9YH22 Uniprot:Q9YH22
Length = 368
Score = 140 (54.3 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQ 47
EK PFI EA+RLR HM ++PDYKYRP++KPK S P +SP +
Sbjct: 91 EKIPFIREAERLRLQHMADYPDYKYRPKKKPKLDSSSKPAVQSPEK 136
>UNIPROTKB|B4DKV0 [details] [associations]
symbol:SOX7 "cDNA FLJ58508, highly similar to Transcription
factor SOX-7" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR000467
Pfam:PF01585 PROSITE:PS50174 SMART:SM00443 Pfam:PF00505
GO:GO:0003676 Gene3D:1.10.30.10 SUPFAM:SSF47095 PROSITE:PS50118
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
HOGENOM:HOG000069999 HOVERGEN:HBG000517 HGNC:HGNC:18196
ChiTaRS:SOX7 OMA:ECPALEA EMBL:AC011008 EMBL:AK296724
IPI:IPI00909880 SMR:B4DKV0 STRING:B4DKV0 Ensembl:ENST00000553390
Ensembl:ENST00000554914 UCSC:uc011kwz.2 Uniprot:B4DKV0
Length = 440
Score = 126 (49.4 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRP++DEA+RLR HM+++P+YKYRPRRK
Sbjct: 142 QKRPYVDEAERLRLQHMQDYPNYKYRPRRK 171
Score = 44 (20.5 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 23/76 (30%), Positives = 29/76 (38%)
Query: 28 PRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPSFPL---PPY-FANHGGGSHPHPLDSL 83
PRR P PG SP AP+P S+ S L P + G P P
Sbjct: 283 PRRIPHLPGHPY----SPEY-APSPLHCSHPLGSLALGQSPGVSMMSPVPGCPPSPAYYS 337
Query: 84 SAAYPPM--NMPHYFG 97
A Y P+ N+ + G
Sbjct: 338 PATYHPLHSNLQAHLG 353
Score = 39 (18.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 17/67 (25%), Positives = 23/67 (34%)
Query: 48 GAPAPTSASNAFPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMN-FS 106
G P P S P +F++ H HP P + P Y SP +
Sbjct: 252 GLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGHPYS-PEYAPSPLHCSHPLG 310
Query: 107 KLVQGQT 113
L GQ+
Sbjct: 311 SLALGQS 317
Score = 39 (18.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 20/75 (26%), Positives = 29/75 (38%)
Query: 38 SIPNNKSPNQGAPAPTSASNAF-PSFPLPP----YF---ANHGGGSHPHPLDSLSAAYP- 88
++P +S ++GA + P LP Y A GGG P +D+ P
Sbjct: 196 ALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHEGPAGGGGGGTPSSVDTYPYGLPT 255
Query: 89 PMNMPHYFGSPFDAM 103
P M SP D +
Sbjct: 256 PPEM-----SPLDVL 265
>UNIPROTKB|P40671 [details] [associations]
symbol:P40671 "SRY-related protein CH32" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:M86324 IPI:IPI00597041
PIR:I50193 ProteinModelPortal:P40671 SMR:P40671 Uniprot:P40671
Length = 54
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 23/27 (85%), Positives = 26/27 (96%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRP 28
EKRP+IDEAKRLRA HMKE+P+YKYRP
Sbjct: 28 EKRPYIDEAKRLRAQHMKEYPEYKYRP 54
>ZFIN|ZDB-GENE-080725-1 [details] [associations]
symbol:sox18 "SRY-box containing gene 18"
species:7955 "Danio rerio" [GO:0001570 "vasculogenesis"
evidence=IGI] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-080725-1 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001570 InterPro:IPR021934
Pfam:PF12067 PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270
CTD:54345 EMBL:CR457456 IPI:IPI00632675 RefSeq:XP_001337702.1
UniGene:Dr.88332 Ensembl:ENSDART00000132992 GeneID:797246
KEGG:dre:797246 NextBio:20932931 Bgee:E7F9I2 Uniprot:E7F9I2
Length = 431
Score = 140 (54.3 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 36/98 (36%), Positives = 54/98 (55%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRK--PKTPGQSIPNN--KSPNQGAPAPTSAS 56
++KRPF++EA+RLR H+++HP+YKYRPRRK PK + P + G P +
Sbjct: 138 LDKRPFVEEAERLRLQHLQDHPNYKYRPRRKKQPKKMKRVEPGLLLQGLAHGGPGDAYSP 197
Query: 57 NAFPSFPLPP--YFAN-HGGGSHPHPLDSLSAAYPPMN 91
+ LPP +F + H G+ P L+S P M+
Sbjct: 198 HRHAHHLLPPLGHFRDLHPSGA-PE-LESFGLPTPEMS 233
>UNIPROTKB|F1N1F9 [details] [associations]
symbol:SOX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000043 "regulation of cardiac cell fate specification"
evidence=IEA] [GO:2000035 "regulation of stem cell division"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0072091 "regulation
of stem cell proliferation" evidence=IEA] [GO:0072001 "renal system
development" evidence=IEA] [GO:0061031 "endodermal digestive tract
morphogenesis" evidence=IEA] [GO:0061010 "gall bladder development"
evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0060956 "endocardial cell differentiation"
evidence=IEA] [GO:0060913 "cardiac cell fate determination"
evidence=IEA] [GO:0060807 "regulation of transcription from RNA
polymerase II promoter involved in definitive endodermal cell fate
specification" evidence=IEA] [GO:0060214 "endocardium formation"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0048866 "stem cell fate specification"
evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
tissue development" evidence=IEA] [GO:0048617 "embryonic foregut
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045597 "positive regulation of cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042662 "negative
regulation of mesodermal cell fate specification" evidence=IEA]
[GO:0042074 "cell migration involved in gastrulation" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007493 "endodermal cell fate determination" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003308 "negative
regulation of Wnt receptor signaling pathway involved in heart
development" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003142 "cardiogenic plate
morphogenesis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001828 "inner cell mass cellular morphogenesis"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0050821
GO:GO:0030308 GO:GO:0043565 GO:GO:0045597 GO:GO:0045944
GO:GO:0007283 GO:GO:0001525 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0003713 GO:GO:0001570
GO:GO:0090090 GO:GO:0001947 GO:GO:0045732 GO:GO:0042074
GO:GO:0003151 GO:GO:0060070 GO:GO:0048617 GO:GO:0021903
GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
GO:GO:0048643 GO:GO:2000035 GO:GO:0042662 GO:GO:0072001
GO:GO:0007493 GO:GO:0072091 GO:GO:0061031 GO:GO:0061009
GO:GO:0061010 GO:GO:0060913 GO:GO:0060956 GO:GO:0060214 KO:K04495
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 CTD:64321 OMA:ALPCRDG GO:GO:0003142
GO:GO:0001828 GO:GO:2000043 GO:GO:0060807 GO:GO:0048866
EMBL:DAAA02038302 IPI:IPI00687993 RefSeq:NP_001193180.1
UniGene:Bt.112292 Ensembl:ENSBTAT00000007553 GeneID:534010
KEGG:bta:534010 NextBio:20876231 Uniprot:F1N1F9
Length = 410
Score = 139 (54.0 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 41/118 (34%), Positives = 53/118 (44%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKP------KTPGQSIPNNKSPNQGAPAPTSA 55
EKRPF++EA+RLR HM++HP+YKYRPRR+ + G + P A P
Sbjct: 113 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPPAAALGPEGG 172
Query: 56 SNAFPSFPLPPYFANHGGGSHPHPL--DSLSAAY---PPMNMPHYFGSPFDAMNFSKL 108
A LP F G + P PL L Y P + P G P + S L
Sbjct: 173 RVAMDGLGLP--FPEQGFPAGP-PLLPPHLGGHYRDCPGLGAPQLDGYPLPTPDTSPL 227
>RGD|620474 [details] [associations]
symbol:Sox9 "SRY-box containing gene 9" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISO] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO;IDA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IDA] [GO:0001501
"skeletal system development" evidence=ISO] [GO:0001502 "cartilage
condensation" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IMP] [GO:0001894 "tissue homeostasis" evidence=IMP]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IMP;IDA] [GO:0001942 "hair follicle development"
evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IMP] [GO:0002063 "chondrocyte development"
evidence=IMP] [GO:0002683 "negative regulation of immune system
process" evidence=IMP] [GO:0003170 "heart valve development"
evidence=IMP] [GO:0003179 "heart valve morphogenesis" evidence=IMP]
[GO:0003188 "heart valve formation" evidence=IMP] [GO:0003203
"endocardial cushion morphogenesis" evidence=IMP] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISO] [GO:0003415 "chondrocyte hypertrophy"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO;IMP;IDA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISO;IDA]
[GO:0004672 "protein kinase activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=ISO] [GO:0007165 "signal transduction" evidence=IMP]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=IDA] [GO:0007283 "spermatogenesis" evidence=IGI]
[GO:0007507 "heart development" evidence=IMP] [GO:0008013
"beta-catenin binding" evidence=IPI] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO;IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0008584 "male gonad development" evidence=ISO;IGI;IMP]
[GO:0010564 "regulation of cell cycle process" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=IGI]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=ISO;ISS] [GO:0014032 "neural crest cell development"
evidence=IMP] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0019100
"male germ-line sex determination" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IMP] [GO:0030198 "extracellular matrix
organization" evidence=IMP] [GO:0030238 "male sex determination"
evidence=IGI] [GO:0030279 "negative regulation of ossification"
evidence=IMP] [GO:0030502 "negative regulation of bone
mineralization" evidence=IMP] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IMP] [GO:0030916 "otic
vesicle formation" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IMP] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISO;IMP;IDA]
[GO:0034236 "protein kinase A catalytic subunit binding"
evidence=ISO] [GO:0035019 "somatic stem cell maintenance"
evidence=IMP] [GO:0035326 "enhancer binding" evidence=ISO;IDA]
[GO:0035622 "intrahepatic bile duct development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO;IMP] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043491 "protein kinase B signaling cascade" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IGI]
[GO:0045595 "regulation of cell differentiation" evidence=IMP]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=IDA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IMP;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;IMP;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IGI] [GO:0048709
"oligodendrocyte differentiation" evidence=IMP] [GO:0050679
"positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0051216 "cartilage development"
evidence=IEP;IMP;TAS] [GO:0060008 "Sertoli cell differentiation"
evidence=IMP] [GO:0060009 "Sertoli cell development" evidence=IGI]
[GO:0060018 "astrocyte fate commitment" evidence=IGI] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0060221
"retinal rod cell differentiation" evidence=IGI] [GO:0060350
"endochondral bone morphogenesis" evidence=IMP] [GO:0060512
"prostate gland morphogenesis" evidence=IMP] [GO:0060517
"epithelial cell proliferation involved in prostatic bud
elongation" evidence=IMP] [GO:0060729 "intestinal epithelial
structure maintenance" evidence=IMP] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IMP]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISO;IDA] [GO:0061138 "morphogenesis of a branching
epithelium" evidence=IGI] [GO:0070168 "negative regulation of
biomineral tissue development" evidence=IMP] [GO:0070371 "ERK1 and
ERK2 cascade" evidence=IDA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IDA] [GO:0071300 "cellular response
to retinoic acid" evidence=IDA] [GO:0071364 "cellular response to
epidermal growth factor stimulus" evidence=IDA] [GO:0071504
"cellular response to heparin" evidence=IDA] [GO:0071560 "cellular
response to transforming growth factor beta stimulus" evidence=ISO]
[GO:0072034 "renal vesicle induction" evidence=IMP] [GO:0072197
"ureter morphogenesis" evidence=IGI] [GO:0072289 "metanephric
nephron tubule formation" evidence=IGI] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IDA] [GO:0090103 "cochlea morphogenesis" evidence=IMP]
[GO:0090184 "positive regulation of kidney development"
evidence=IGI] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] [GO:2000020
"positive regulation of male gonad development" evidence=ISO]
[GO:2000138 "positive regulation of cell proliferation involved in
heart morphogenesis" evidence=IMP] [GO:2000741 "positive regulation
of mesenchymal stem cell differentiation" evidence=ISO]
InterPro:IPR009071 Pfam:PF00505 RGD:620474 GO:GO:0003700
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0051216 InterPro:IPR022151 Pfam:PF12444 HSSP:P48432
IPI:IPI00392284 EMBL:AB073720 UniGene:Rn.95086
ProteinModelPortal:Q91WY3 STRING:Q91WY3 HOVERGEN:HBG098066
Genevestigator:Q91WY3 Uniprot:Q91WY3
Length = 164
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 135 EKRPFVEEAERLRVQHRKDHPDYKYQPRRR 164
>UNIPROTKB|P35716 [details] [associations]
symbol:SOX11 "Transcription factor SOX-11" species:9606
"Homo sapiens" [GO:0001822 "kidney development" evidence=IEA]
[GO:0014003 "oligodendrocyte development" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008135 "translation factor activity,
nucleic acid binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:2001111 "positive regulation of lens epithelial
cell proliferation" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
binding" evidence=IDA] [GO:0001501 "skeletal system development"
evidence=ISS] [GO:0001841 "neural tube formation" evidence=ISS]
[GO:0003211 "cardiac ventricle formation" evidence=ISS] [GO:0014009
"glial cell proliferation" evidence=ISS] [GO:0014032 "neural crest
cell development" evidence=ISS] [GO:0021510 "spinal cord
development" evidence=ISS] [GO:0021782 "glial cell development"
evidence=ISS] [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=ISS] [GO:0035332 "positive regulation of
hippo signaling cascade" evidence=ISS] [GO:0046887 "positive
regulation of hormone secretion" evidence=ISS] [GO:0060174 "limb
bud formation" evidence=ISS] [GO:0060548 "negative regulation of
cell death" evidence=ISS] [GO:0060563 "neuroepithelial cell
differentiation" evidence=ISS] [GO:0061053 "somite development"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISS] [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISS] [GO:2000678 "negative regulation of
transcription regulatory region DNA binding" evidence=ISS]
[GO:0017015 "regulation of transforming growth factor beta receptor
signaling pathway" evidence=IEP] [GO:0045778 "positive regulation
of ossification" evidence=IMP] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IMP] [GO:2000648 "positive
regulation of stem cell proliferation" evidence=IMP] [GO:0072395
"signal transduction involved in cell cycle checkpoint"
evidence=IEP] [GO:0060253 "negative regulation of glial cell
proliferation" evidence=IMP] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IMP] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0010628 "positive
regulation of gene expression" evidence=IMP] [GO:0050672 "negative
regulation of lymphocyte proliferation" evidence=IMP] [GO:0003151
"outflow tract morphogenesis" evidence=ISS] [GO:0048557 "embryonic
digestive tract morphogenesis" evidence=ISS] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISS] [GO:0060022 "hard
palate development" evidence=ISS] [GO:0060023 "soft palate
development" evidence=ISS] [GO:0060412 "ventricular septum
morphogenesis" evidence=ISS] [GO:0060425 "lung morphogenesis"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0030182 "neuron differentiation" evidence=IEP]
[GO:0002089 "lens morphogenesis in camera-type eye" evidence=ISS]
[GO:0030513 "positive regulation of BMP signaling pathway"
evidence=ISS] [GO:0061303 "cornea development in camera-type eye"
evidence=ISS] [GO:0061386 "closure of optic fissure" evidence=ISS]
[GO:0050769 "positive regulation of neurogenesis" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003357 "noradrenergic neuron
differentiation" evidence=ISS] [GO:0048485 "sympathetic nervous
system development" evidence=ISS] [GO:0006412 "translation"
evidence=IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0008135 GO:GO:0001077 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0014009 GO:GO:0001822 GO:GO:0050769 GO:GO:0030513
GO:GO:0045669 GO:GO:0045666 GO:GO:0060548 GO:GO:0021510
GO:GO:0014032 GO:GO:0048704 GO:GO:0001105 GO:GO:0000979
GO:GO:0061303 GO:GO:0061029 GO:GO:0003151 GO:GO:0048485
GO:GO:0001158 GO:GO:0014003 GO:GO:0060563 GO:GO:0045778
GO:GO:0001841 GO:GO:0017015 GO:GO:0002089 GO:GO:0060412
GO:GO:0046887 GO:GO:0060174 GO:GO:0060023 GO:GO:0060022
GO:GO:2000648 GO:GO:0060253 GO:GO:0048557 GO:GO:0060425
GO:GO:0061386 GO:GO:0050672 GO:GO:2000678 GO:GO:0021782
GO:GO:0003357 GO:GO:0061053 GO:GO:0003211 CTD:6664
HOVERGEN:HBG005040 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
EMBL:U23752 EMBL:AB028641 EMBL:AC108025 EMBL:X73038 IPI:IPI00020435
PIR:G01758 PIR:S34118 RefSeq:NP_003099.1 UniGene:Hs.432638
ProteinModelPortal:P35716 SMR:P35716 STRING:P35716
PhosphoSite:P35716 DMDM:1351142 PaxDb:P35716 PRIDE:P35716
DNASU:6664 Ensembl:ENST00000322002 GeneID:6664 KEGG:hsa:6664
UCSC:uc002qyj.3 GeneCards:GC02P005834 HGNC:HGNC:11191 HPA:CAB009378
HPA:CAB056152 HPA:HPA000536 MIM:600898 neXtProt:NX_P35716
PharmGKB:PA36028 eggNOG:NOG130659 HOGENOM:HOG000231874
InParanoid:P35716 OMA:TEEGEFM OrthoDB:EOG4QVCCX ChiTaRS:SOX11
GenomeRNAi:6664 NextBio:25981 ArrayExpress:P35716 Bgee:P35716
CleanEx:HS_SOX11 Genevestigator:P35716 GermOnline:ENSG00000176887
GO:GO:0035332 GO:GO:2001111 GO:GO:0072404 Uniprot:P35716
Length = 441
Score = 139 (54.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN-NKSPNQGA 49
EK PFI EA+RLR HM ++PDYKYRPR+KPK + P+ ++SP + A
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKMDPSAKPSASQSPEKSA 142
>UNIPROTKB|F1S9L1 [details] [associations]
symbol:SOX11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=ISS] [GO:0061053 "somite
development" evidence=ISS] [GO:0035332 "positive regulation of
hippo signaling cascade" evidence=ISS] [GO:0021782 "glial cell
development" evidence=ISS] [GO:0003211 "cardiac ventricle
formation" evidence=ISS] [GO:2001111 "positive regulation of lens
epithelial cell proliferation" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008135 "translation factor activity,
nucleic acid binding" evidence=ISS] [GO:0050769 "positive
regulation of neurogenesis" evidence=ISS] [GO:0045666 "positive
regulation of neuron differentiation" evidence=ISS] [GO:0061386
"closure of optic fissure" evidence=ISS] [GO:0061303 "cornea
development in camera-type eye" evidence=ISS] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=ISS] [GO:0002089
"lens morphogenesis in camera-type eye" evidence=ISS] [GO:0061029
"eyelid development in camera-type eye" evidence=ISS] [GO:0060425
"lung morphogenesis" evidence=ISS] [GO:0060412 "ventricular septum
morphogenesis" evidence=ISS] [GO:0060023 "soft palate development"
evidence=ISS] [GO:0060022 "hard palate development" evidence=ISS]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISS]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=ISS]
[GO:0003151 "outflow tract morphogenesis" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISS] [GO:0045669 "positive regulation of osteoblast
differentiation" evidence=ISS] [GO:2000648 "positive regulation of
stem cell proliferation" evidence=ISS] [GO:0045778 "positive
regulation of ossification" evidence=ISS] [GO:0060253 "negative
regulation of glial cell proliferation" evidence=ISS] [GO:0010629
"negative regulation of gene expression" evidence=ISS] [GO:0010628
"positive regulation of gene expression" evidence=ISS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060563 "neuroepithelial cell
differentiation" evidence=ISS] [GO:0060548 "negative regulation of
cell death" evidence=ISS] [GO:0060174 "limb bud formation"
evidence=ISS] [GO:0048485 "sympathetic nervous system development"
evidence=ISS] [GO:0046887 "positive regulation of hormone
secretion" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=ISS] [GO:0021510 "spinal cord
development" evidence=ISS] [GO:0014032 "neural crest cell
development" evidence=ISS] [GO:0014009 "glial cell proliferation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0003357 "noradrenergic neuron
differentiation" evidence=ISS] [GO:0001841 "neural tube formation"
evidence=ISS] [GO:0001501 "skeletal system development"
evidence=ISS] [GO:0050672 "negative regulation of lymphocyte
proliferation" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0008135
GO:GO:0001077 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0014009 GO:GO:0050769
GO:GO:0030513 GO:GO:0045669 GO:GO:0045666 GO:GO:0060548
GO:GO:0021510 GO:GO:0014032 GO:GO:0048704 GO:GO:0001105
GO:GO:0000979 GO:GO:0061303 GO:GO:0061029 GO:GO:0003151
GO:GO:0048485 GO:GO:0001158 GO:GO:0060563 GO:GO:0045778
GO:GO:0001841 GO:GO:0017015 GO:GO:0002089 GO:GO:0060412
GO:GO:0046887 GO:GO:0060174 GO:GO:0060023 GO:GO:0060022
GO:GO:2000648 GO:GO:0060253 GO:GO:0048557 GO:GO:0060425
GO:GO:0061386 GO:GO:0050672 GO:GO:2000678 GO:GO:0021782
GO:GO:0003357 GO:GO:0061053 GO:GO:0003211 KO:K09268
InterPro:IPR017386 PIRSF:PIRSF038098 OMA:TEEGEFM GO:GO:0035332
GO:GO:2001111 GO:GO:0072404 GeneTree:ENSGT00690000101789
EMBL:FP245498 RefSeq:XP_003354985.1 Ensembl:ENSSSCT00000009462
GeneID:100514639 KEGG:ssc:100514639 Uniprot:F1S9L1
Length = 447
Score = 139 (54.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPN-NKSPNQGA 49
EK PFI EA+RLR HM ++PDYKYRPR+KPK + P+ ++SP + A
Sbjct: 94 EKIPFIREAERLRLKHMADYPDYKYRPRKKPKMDPSAKPSASQSPEKNA 142
>ZFIN|ZDB-GENE-001103-1 [details] [associations]
symbol:sox9a "SRY-box containing gene 9a"
species:7955 "Danio rerio" [GO:0048839 "inner ear development"
evidence=IGI;IMP] [GO:0033339 "pectoral fin development"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0048708 "astrocyte differentiation" evidence=IMP] [GO:0048709
"oligodendrocyte differentiation" evidence=IMP] [GO:0043049 "otic
placode formation" evidence=IGI] [GO:0035118 "embryonic pectoral
fin morphogenesis" evidence=IMP] [GO:0030916 "otic vesicle
formation" evidence=IGI] [GO:0060536 "cartilage morphogenesis"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-001103-1
GO:GO:0005737 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0048709 GO:GO:0035118 GO:GO:0043049
GO:GO:0060536 GO:GO:0048708 GeneTree:ENSGT00670000097649
HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 OMA:GAGHVWM
EMBL:CU074420 EMBL:AF277096 EMBL:AY090034 EMBL:AY090035
IPI:IPI00507610 RefSeq:NP_571718.1 UniGene:Dr.80814 SMR:Q9DFH2
STRING:Q9DFH2 Ensembl:ENSDART00000005676 GeneID:60641
KEGG:dre:60641 CTD:60641 InParanoid:Q9DFH2 NextBio:20892427
Uniprot:Q9DFH2
Length = 462
Score = 139 (54.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
+EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S ++ T S NA
Sbjct: 151 VEKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSESEDGSEQTHISPNA 204
>WB|WBGene00004771 [details] [associations]
symbol:sem-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 EMBL:FO080144 eggNOG:NOG130659
GeneTree:ENSGT00690000101789 HSSP:P35710 RefSeq:NP_740846.1
ProteinModelPortal:Q8T3B9 SMR:Q8T3B9 EnsemblMetazoa:C32E12.5.1
EnsemblMetazoa:C32E12.5.2 GeneID:172162 KEGG:cel:CELE_C32E12.5
UCSC:C32E12.5.1 CTD:172162 WormBase:C32E12.5 HOGENOM:HOG000019701
InParanoid:Q8T3B9 OMA:PSEFGHA NextBio:874275 Uniprot:Q8T3B9
Length = 404
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK-TPGQSI--PNN-KSPNQGAPAPTSAS 56
EK PF+ EA+RLR HM+E+PDYKY+PR+KPK P ++ P ++P Q P AS
Sbjct: 138 EKAPFVAEAERLRVCHMQEYPDYKYKPRKKPKKNPDGTLQQPAQPQAPQQQQAPPRGAS 196
>UNIPROTKB|G3N2M6 [details] [associations]
symbol:SOX7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060828 "regulation of canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001706 "endoderm formation"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0043565 GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0043280
GO:GO:0060828 GO:GO:0001706 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 OMA:ECPALEA
EMBL:DAAA02021933 Ensembl:ENSBTAT00000065564 Uniprot:G3N2M6
Length = 406
Score = 126 (49.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRP++DEA+RLR HM+++P+YKYRPRRK
Sbjct: 109 QKRPYVDEAERLRLQHMQDYPNYKYRPRRK 138
Score = 40 (19.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 74 GSHPHPLDSLSAAYPPMN 91
G P P AAYPP++
Sbjct: 296 GCPPSPAYYSQAAYPPLH 313
>UNIPROTKB|F1MBL5 [details] [associations]
symbol:SOX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072289 "metanephric
nephron tubule formation" evidence=IEA] [GO:0072197 "ureter
morphogenesis" evidence=IEA] [GO:0072034 "renal vesicle induction"
evidence=IEA] [GO:0061138 "morphogenesis of a branching epithelium"
evidence=IEA] [GO:0060612 "adipose tissue development"
evidence=IEA] [GO:0060221 "retinal rod cell differentiation"
evidence=IEA] [GO:0060018 "astrocyte fate commitment" evidence=IEA]
[GO:0060009 "Sertoli cell development" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0048484
"enteric nervous system development" evidence=IEA] [GO:0048469
"cell maturation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045662 "negative
regulation of myoblast differentiation" evidence=IEA] [GO:0045444
"fat cell differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0033690
"positive regulation of osteoblast proliferation" evidence=IEA]
[GO:0014015 "positive regulation of gliogenesis" evidence=IEA]
[GO:0010817 "regulation of hormone levels" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0007422 "peripheral nervous system development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0001755 "neural crest cell migration" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0007165 GO:GO:0043066
GO:GO:0001755 GO:GO:0001701 GO:GO:0045944 GO:GO:0007422
GO:GO:0060612 GO:GO:0003700 GO:GO:0007283 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0060009
GO:GO:0090190 GO:GO:0001649 GO:GO:0045444 GO:GO:0000979
GO:GO:0048709 GO:GO:0048484 GO:GO:0010817 GO:GO:0048469
GO:GO:0033690 GO:GO:0045662 GO:GO:0046533 GO:GO:0060018
GO:GO:0014015 GO:GO:0072289 GO:GO:0072197
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
OMA:DQSHGSP GO:GO:0061138 GO:GO:0072034 GO:GO:0060221
EMBL:DAAA02057285 IPI:IPI00696341 Ensembl:ENSBTAT00000027633
Uniprot:F1MBL5
Length = 468
Score = 137 (53.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTP-GQSIPNNKSPNQGAPAPTSASNAFP 60
EKRPF++EA+RLR H K+HPDYKY+PRR+ GQS ++ S + P S
Sbjct: 153 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKTGQS--DSDSGAELGHHPGSMYKTDA 210
Query: 61 SFPLPPYFANHGGGSHPHP 79
+ ++H G +H P
Sbjct: 211 GLGDAHHHSDHTGQTHGPP 229
>ZFIN|ZDB-GENE-991213-1 [details] [associations]
symbol:sox17 "SRY-box containing gene 17"
species:7955 "Danio rerio" [GO:0070121 "Kupffer's vesicle
development" evidence=IMP] [GO:0061371 "determination of heart
left/right asymmetry" evidence=IMP] [GO:0035469 "determination of
pancreatic left/right asymmetry" evidence=IMP] InterPro:IPR009071
Pfam:PF00505 ZFIN:ZDB-GENE-991213-1 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0070121 GO:GO:0061371
HSSP:P48432 HOVERGEN:HBG000517 GO:GO:0035469 EMBL:AF168614
IPI:IPI00490847 UniGene:Dr.81308 ProteinModelPortal:Q9PTN0
SMR:Q9PTN0 STRING:Q9PTN0 InParanoid:Q9PTN0 ArrayExpress:Q9PTN0
Uniprot:Q9PTN0
Length = 413
Score = 136 (52.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 35/116 (30%), Positives = 56/116 (48%)
Query: 1 MEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFP 60
++KRPF++EA+RLR HM++HP+YKYRP+R+ + + NK P P
Sbjct: 107 VDKRPFVEEAERLRVKHMQDHPNYKYRPKRR-----KQVKRNKRLEPSFPLPGMCDAKMT 161
Query: 61 SFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDA--MNFSKLVQGQTS 114
F A + G P ++ + ++P SP DA F +Q Q++
Sbjct: 162 LFT-EGMSAGYSGAGLPQYCEN-HTLFESYSLPTPDPSPMDAGTTEFFAQLQDQSA 215
>RGD|2320738 [details] [associations]
symbol:LOC100361122 "SRY-box containing gene 9" species:10116
"Rattus norvegicus" [GO:0001046 "core promoter sequence-specific
DNA binding" evidence=ISS] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0001502 "cartilage
condensation" evidence=ISS] [GO:0001503 "ossification"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=ISS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0001894 "tissue homeostasis" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0001942 "hair follicle development" evidence=ISS]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=ISS] [GO:0002683 "negative regulation of immune system
process" evidence=ISS] [GO:0003170 "heart valve development"
evidence=ISS] [GO:0003179 "heart valve morphogenesis" evidence=ISS]
[GO:0003188 "heart valve formation" evidence=IEA] [GO:0003203
"endocardial cushion morphogenesis" evidence=ISS] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0003415 "chondrocyte hypertrophy"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0006461 "protein complex assembly"
evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0008584 "male gonad development" evidence=ISS] [GO:0010564
"regulation of cell cycle process" evidence=ISS] [GO:0010628
"positive regulation of gene expression" evidence=IDA] [GO:0010634
"positive regulation of epithelial cell migration" evidence=ISS]
[GO:0014032 "neural crest cell development" evidence=IEA]
[GO:0014068 "positive regulation of phosphatidylinositol 3-kinase
cascade" evidence=ISS] [GO:0019100 "male germ-line sex
determination" evidence=ISS] [GO:0019933 "cAMP-mediated signaling"
evidence=IDA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030279 "negative regulation of ossification"
evidence=ISS] [GO:0030502 "negative regulation of bone
mineralization" evidence=IEA] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=ISS] [GO:0030879 "mammary
gland development" evidence=IEA] [GO:0030903 "notochord
development" evidence=IEA] [GO:0030916 "otic vesicle formation"
evidence=ISS] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=ISS] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=ISS] [GO:0034236 "protein
kinase A catalytic subunit binding" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=ISS] [GO:0035326 "enhancer
binding" evidence=IDA] [GO:0035622 "intrahepatic bile duct
development" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=ISS] [GO:0042981 "regulation of apoptotic
process" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=ISS] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046533 "negative
regulation of photoreceptor cell differentiation" evidence=ISS]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEA]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051216 "cartilage development"
evidence=ISS;NAS] [GO:0060008 "Sertoli cell differentiation"
evidence=ISS] [GO:0060009 "Sertoli cell development" evidence=IEP]
[GO:0060018 "astrocyte fate commitment" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=ISS] [GO:0060174
"limb bud formation" evidence=IEA] [GO:0060221 "retinal rod cell
differentiation" evidence=ISS] [GO:0060517 "epithelial cell
proliferation involved in prostatic bud elongation" evidence=ISS]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=ISS] [GO:0060784 "regulation of cell proliferation
involved in tissue homeostasis" evidence=ISS] [GO:0061036 "positive
regulation of cartilage development" evidence=ISS] [GO:0061138
"morphogenesis of a branching epithelium" evidence=ISS] [GO:0070168
"negative regulation of biomineral tissue development"
evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade" evidence=ISS]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=ISS] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071347 "cellular response to interleukin-1"
evidence=IEA] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=ISS] [GO:0071504 "cellular response to
heparin" evidence=ISS] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISS] [GO:0072034
"renal vesicle induction" evidence=ISS] [GO:0072190 "ureter
urothelium development" evidence=IEA] [GO:0072197 "ureter
morphogenesis" evidence=IEA] [GO:0072289 "metanephric nephron
tubule formation" evidence=ISS] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISS] [GO:0090103
"cochlea morphogenesis" evidence=ISS] [GO:0090184 "positive
regulation of kidney development" evidence=ISS] [GO:0090190
"positive regulation of branching involved in ureteric bud
morphogenesis" evidence=ISS] [GO:2000020 "positive regulation of
male gonad development" evidence=ISS] [GO:2000138 "positive
regulation of cell proliferation involved in heart morphogenesis"
evidence=IEA] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=ISS] InterPro:IPR009071 RGD:2320738
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0030155 GO:GO:0071560 GO:GO:0019933
GO:GO:0070371 GO:GO:0071300 GO:GO:0030198 GO:GO:0014068
GO:GO:0007283 GO:GO:0003682 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504 GO:GO:0001942
GO:GO:0032332 GO:GO:0030279 GO:GO:0060009 GO:GO:0090090
GO:GO:0071260 GO:GO:0035019 GO:GO:0001934 GO:GO:0090190
GO:GO:0071364 GO:GO:0031018 GO:GO:0043491 GO:GO:0014032
GO:GO:0001502 GO:GO:0045732 GO:GO:0001837 GO:GO:0050680
GO:GO:0001503 GO:GO:0001658 GO:GO:0071347 GO:GO:0001158
GO:GO:0030858 GO:GO:0048709 GO:GO:0010634 GO:GO:0016585
GO:GO:0006334 GO:GO:0003413 GO:GO:0030879 GO:GO:0050679
GO:GO:0002053 GO:GO:0001046 GO:GO:0030502 GO:GO:2000138
GO:GO:0061036 GO:GO:0003203 GO:GO:0032331 GO:GO:0045662
GO:GO:0030916 GO:GO:2000020 GO:GO:0046533 GO:GO:0060174
GO:GO:0030903 GO:GO:0090103 GO:GO:0010564 GO:GO:0019100
GO:GO:0003179 GO:GO:0070168 GO:GO:0060018 GO:GO:0035622
GO:GO:0072190 GO:GO:0072289 GO:GO:0072197 GO:GO:0003188
GeneTree:ENSGT00670000097649 GO:GO:2000741 GO:GO:0072034
GO:GO:0060221 GO:GO:0003415 GO:GO:0060517 GO:GO:0060729
GO:GO:0002683 GO:GO:0060784 OMA:GAGHVWM IPI:IPI00392284
Ensembl:ENSRNOT00000003511 Uniprot:F1LYL9
Length = 364
Score = 135 (52.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S NA
Sbjct: 7 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHISPNA 59
>UNIPROTKB|A6PVD3 [details] [associations]
symbol:SOX10 "Transcription factor SOX-10" species:9606
"Homo sapiens" [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IEA]
[GO:0000980 "RNA polymerase II distal enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007422 "peripheral nervous system development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0014015 "positive regulation of gliogenesis" evidence=IEA]
[GO:0030318 "melanocyte differentiation" evidence=IEA] [GO:0031315
"extrinsic to mitochondrial outer membrane" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0048546 "digestive
tract morphogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0048709 "oligodendrocyte differentiation"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043066 GO:GO:0001755 GO:GO:0001701
GO:GO:0045944 GO:GO:0048863 GO:GO:0007422 GO:GO:0003682
GO:GO:0003705 GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589
GO:GO:0090090 GO:GO:0030318 GO:GO:0048709 GO:GO:0031315
GO:GO:0048484 GO:GO:0002052 GO:GO:0048546 GO:GO:0048469
EMBL:AL031587 GO:GO:0014015 HOVERGEN:HBG002061 InterPro:IPR022151
Pfam:PF12444 UniGene:Hs.376984 HGNC:HGNC:11190 IPI:IPI00908479
SMR:A6PVD3 STRING:A6PVD3 Ensembl:ENST00000427770 UCSC:uc010gxj.3
HOGENOM:HOG000070122 Uniprot:A6PVD3
Length = 213
Score = 128 (50.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRPFI+EA+RLR H K+HPDYKY+PRR+
Sbjct: 149 DKRPFIEEAERLRMQHKKDHPDYKYQPRRR 178
>UNIPROTKB|Q6DFF5 [details] [associations]
symbol:sox9-b "Transcription factor Sox-9-B" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0014029 "neural crest formation"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0043049 "otic placode formation" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0051216 "cartilage
development" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0006351 GO:GO:0019899 GO:GO:0007506 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0051216
GO:GO:0043049 GO:GO:0014029 KO:K09270 InterPro:IPR022151
Pfam:PF12444 HSSP:P48432 EMBL:AB439583 EMBL:BC076783
RefSeq:NP_001087942.1 UniGene:Xl.28992 ProteinModelPortal:Q6DFF5
SMR:Q6DFF5 GeneID:494585 KEGG:xla:494585 CTD:494585
Xenbase:XB-GENE-1034775 Uniprot:Q6DFF5
Length = 476
Score = 136 (52.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEQDDSAEQTHISPNA 202
>UNIPROTKB|Q6F2E7 [details] [associations]
symbol:sox9 "Transcription factor Sox-9" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0014029
"neural crest formation" evidence=ISS] [GO:0019899 "enzyme binding"
evidence=ISS] [GO:0043049 "otic placode formation" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051216
"cartilage development" evidence=IEP] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0006351 GO:GO:0019899 GO:GO:0007506
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0051216 GO:GO:0043049 GO:GO:0014029 KO:K09270
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 CTD:6662 EMBL:AC148478
EMBL:CR855424 RefSeq:NP_001016853.1 UniGene:Str.15584
ProteinModelPortal:Q6F2E7 SMR:Q6F2E7 STRING:Q6F2E7 GeneID:549607
KEGG:xtr:549607 Xenbase:XB-GENE-1034769 eggNOG:NOG295090
Uniprot:Q6F2E7
Length = 482
Score = 136 (52.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S NA
Sbjct: 150 EKRPFVEEAERLRIQHKKDHPDYKYQPRRR-----KSVKNGQSEQEDGAEQTHISPNA 202
>UNIPROTKB|O73668 [details] [associations]
symbol:Sox9 "SOX9" species:9031 "Gallus gallus" [GO:0001046
"core promoter sequence-specific DNA binding" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=IEA]
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0001708 "cell fate
specification" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=IEA] [GO:0001942 "hair follicle
development" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0002683 "negative
regulation of immune system process" evidence=IEA] [GO:0003188
"heart valve formation" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003413 "chondrocyte
differentiation involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0003415 "chondrocyte hypertrophy" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004672 "protein
kinase activity" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=IEA] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0010564 "regulation of
cell cycle process" evidence=IEA] [GO:0010634 "positive regulation
of epithelial cell migration" evidence=IEA] [GO:0014032 "neural
crest cell development" evidence=IEA] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=IEA]
[GO:0019100 "male germ-line sex determination" evidence=IEA]
[GO:0019933 "cAMP-mediated signaling" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030903 "notochord development"
evidence=IEA] [GO:0030916 "otic vesicle formation" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0034236 "protein kinase A
catalytic subunit binding" evidence=IEA] [GO:0035019 "somatic stem
cell maintenance" evidence=IEA] [GO:0035622 "intrahepatic bile duct
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0045662 "negative regulation
of myoblast differentiation" evidence=IEA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0060009 "Sertoli cell development" evidence=IEA] [GO:0060018
"astrocyte fate commitment" evidence=IEA] [GO:0060174 "limb bud
formation" evidence=IEA] [GO:0060221 "retinal rod cell
differentiation" evidence=IEA] [GO:0060517 "epithelial cell
proliferation involved in prostatic bud elongation" evidence=IEA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA] [GO:0060784 "regulation of cell proliferation
involved in tissue homeostasis" evidence=IEA] [GO:0061036 "positive
regulation of cartilage development" evidence=IEA] [GO:0070371
"ERK1 and ERK2 cascade" evidence=IEA] [GO:0071260 "cellular
response to mechanical stimulus" evidence=IEA] [GO:0071300
"cellular response to retinoic acid" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0071364
"cellular response to epidermal growth factor stimulus"
evidence=IEA] [GO:0071504 "cellular response to heparin"
evidence=IEA] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IEA] [GO:0072034 "renal vesicle
induction" evidence=IEA] [GO:0072190 "ureter urothelium
development" evidence=IEA] [GO:0072197 "ureter morphogenesis"
evidence=IEA] [GO:0072289 "metanephric nephron tubule formation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090103 "cochlea
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:2000020 "positive regulation of male gonad development"
evidence=IEA] [GO:2000138 "positive regulation of cell
proliferation involved in heart morphogenesis" evidence=IEA]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0030155 GO:GO:0071560 GO:GO:0019933
GO:GO:0070371 GO:GO:0071300 GO:GO:0030198 GO:GO:0014068
GO:GO:0003682 GO:GO:0003705 GO:GO:0001077 GO:GO:0006338
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0004672 GO:GO:0071504 GO:GO:0032332 GO:GO:0090090
GO:GO:0071260 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0043491 GO:GO:0045732 GO:GO:0050680 GO:GO:0071347
GO:GO:0001158 GO:GO:0030858 GO:GO:0010634 GO:GO:0016585
GO:GO:0006334 GO:GO:0050679 GO:GO:0002053 GO:GO:0001046
GO:GO:0030502 GO:GO:2000138 GO:GO:0061036 GO:GO:0032331
GO:GO:0045662 GO:GO:2000020 GO:GO:0010564
GeneTree:ENSGT00670000097649 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 GO:GO:2000741
GO:GO:0072034 GO:GO:0002683 CTD:6662 UniGene:Gga.890
EMBL:AADN02030063 EMBL:AB012236 IPI:IPI00603266 RefSeq:NP_989612.1
SMR:O73668 STRING:O73668 Ensembl:ENSGALT00000006994 GeneID:374148
KEGG:gga:374148 InParanoid:O73668 NextBio:20813662 Uniprot:O73668
Length = 494
Score = 136 (52.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEQEEGSEQTHISPNA 202
>UNIPROTKB|F1P307 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9031
"Gallus gallus" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0001503 "ossification" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001708
"cell fate specification" evidence=IEA] [GO:0001837 "epithelial to
mesenchymal transition" evidence=IEA] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=IEA] [GO:0001942
"hair follicle development" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0002683 "negative regulation of immune system process"
evidence=IEA] [GO:0003188 "heart valve formation" evidence=IEA]
[GO:0003203 "endocardial cushion morphogenesis" evidence=IEA]
[GO:0003413 "chondrocyte differentiation involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0003415 "chondrocyte
hypertrophy" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0010564 "regulation of cell cycle process"
evidence=IEA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IEA] [GO:0014032 "neural crest cell
development" evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0019100
"male germ-line sex determination" evidence=IEA] [GO:0019933
"cAMP-mediated signaling" evidence=IEA] [GO:0030155 "regulation of
cell adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030502 "negative regulation of
bone mineralization" evidence=IEA] [GO:0030858 "positive regulation
of epithelial cell differentiation" evidence=IEA] [GO:0030879
"mammary gland development" evidence=IEA] [GO:0030903 "notochord
development" evidence=IEA] [GO:0030916 "otic vesicle formation"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0034236 "protein
kinase A catalytic subunit binding" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0035622
"intrahepatic bile duct development" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043491 "protein kinase B signaling cascade" evidence=IEA]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046533 "negative
regulation of photoreceptor cell differentiation" evidence=IEA]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEA]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IEA] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IEA] [GO:0060009 "Sertoli cell development"
evidence=IEA] [GO:0060018 "astrocyte fate commitment" evidence=IEA]
[GO:0060174 "limb bud formation" evidence=IEA] [GO:0060221 "retinal
rod cell differentiation" evidence=IEA] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=IEA] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=IEA] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=IEA]
[GO:0061036 "positive regulation of cartilage development"
evidence=IEA] [GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071347 "cellular response to interleukin-1"
evidence=IEA] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=IEA] [GO:0071504 "cellular response to
heparin" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:0072034
"renal vesicle induction" evidence=IEA] [GO:0072190 "ureter
urothelium development" evidence=IEA] [GO:0072197 "ureter
morphogenesis" evidence=IEA] [GO:0072289 "metanephric nephron
tubule formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090103
"cochlea morphogenesis" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:2000020 "positive regulation of male gonad
development" evidence=IEA] [GO:2000138 "positive regulation of cell
proliferation involved in heart morphogenesis" evidence=IEA]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0030155 GO:GO:0071560 GO:GO:0019933
GO:GO:0070371 GO:GO:0071300 GO:GO:0030198 GO:GO:0014068
GO:GO:0003682 GO:GO:0003705 GO:GO:0001077 GO:GO:0006338
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0004672 GO:GO:0071504 GO:GO:0032332 GO:GO:0090090
GO:GO:0071260 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0043491 GO:GO:0045732 GO:GO:0050680 GO:GO:0071347
GO:GO:0001158 GO:GO:0030858 GO:GO:0010634 GO:GO:0016585
GO:GO:0006334 GO:GO:0050679 GO:GO:0002053 GO:GO:0001046
GO:GO:0030502 GO:GO:2000138 GO:GO:0061036 GO:GO:0032331
GO:GO:0045662 GO:GO:2000020 GO:GO:0010564
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0002683 OMA:GAGHVWM
EMBL:AADN02030063 IPI:IPI00818672 Ensembl:ENSGALT00000038513
Uniprot:F1P307
Length = 496
Score = 136 (52.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N +S + T S NA
Sbjct: 152 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQSEQEEGSEQTHISPNA 204
>UNIPROTKB|Q90ZH9 [details] [associations]
symbol:sox17a-b "Transcription factor Sox-17-alpha-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007442 "hindgut morphogenesis" evidence=IMP] [GO:0007492
"endoderm development" evidence=IMP] [GO:0007494 "midgut
development" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0042074 "cell migration involved in gastrulation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0016055
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 GO:GO:0007494
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0008013 GO:GO:0042074 GO:GO:0007492 GO:GO:0007442 HSSP:P48431
KO:K04495 InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
EMBL:AB052691 EMBL:BC060350 RefSeq:NP_001083136.1 UniGene:Xl.11957
ProteinModelPortal:Q90ZH9 SMR:Q90ZH9 GeneID:398765 KEGG:xla:398765
CTD:398765 Xenbase:XB-GENE-6255435 Uniprot:Q90ZH9
Length = 377
Score = 133 (51.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 34/98 (34%), Positives = 47/98 (47%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
EKRPF++EA+RLR HM++HP+YKYRPRR+ + N + ++
Sbjct: 103 EKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRMKRAENGFMHMTEAQESAVMGTDGR 162
Query: 62 FPLPPYFANHGGGSHPHP-LDSLSAAYPPMNM-PHYFG 97
L + N G +P L S P M PHY G
Sbjct: 163 MCLENF--NLGFHEQTYPQLPQASHYREPQAMAPHYDG 198
>UNIPROTKB|F1PSM5 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9615
"Canis lupus familiaris" [GO:2000741 "positive regulation of
mesenchymal stem cell differentiation" evidence=IEA] [GO:2000138
"positive regulation of cell proliferation involved in heart
morphogenesis" evidence=IEA] [GO:2000020 "positive regulation of
male gonad development" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0090103 "cochlea morphogenesis" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0072289 "metanephric nephron
tubule formation" evidence=IEA] [GO:0072197 "ureter morphogenesis"
evidence=IEA] [GO:0072190 "ureter urothelium development"
evidence=IEA] [GO:0072034 "renal vesicle induction" evidence=IEA]
[GO:0071560 "cellular response to transforming growth factor beta
stimulus" evidence=IEA] [GO:0071504 "cellular response to heparin"
evidence=IEA] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0071300 "cellular response to
retinoic acid" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0070371 "ERK1 and ERK2
cascade" evidence=IEA] [GO:0061036 "positive regulation of
cartilage development" evidence=IEA] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IEA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=IEA] [GO:0060221 "retinal rod
cell differentiation" evidence=IEA] [GO:0060174 "limb bud
formation" evidence=IEA] [GO:0060018 "astrocyte fate commitment"
evidence=IEA] [GO:0060009 "Sertoli cell development" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] [GO:0035622 "intrahepatic bile
duct development" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0034236 "protein kinase A catalytic
subunit binding" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0030916 "otic vesicle formation" evidence=IEA] [GO:0030903
"notochord development" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0019933
"cAMP-mediated signaling" evidence=IEA] [GO:0019100 "male germ-line
sex determination" evidence=IEA] [GO:0014068 "positive regulation
of phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0014032
"neural crest cell development" evidence=IEA] [GO:0010634 "positive
regulation of epithelial cell migration" evidence=IEA] [GO:0010564
"regulation of cell cycle process" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003415 "chondrocyte hypertrophy"
evidence=IEA] [GO:0003413 "chondrocyte differentiation involved in
endochondral bone morphogenesis" evidence=IEA] [GO:0003203
"endocardial cushion morphogenesis" evidence=IEA] [GO:0003188
"heart valve formation" evidence=IEA] [GO:0002683 "negative
regulation of immune system process" evidence=IEA] [GO:0002053
"positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001502
"cartilage condensation" evidence=IEA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0001708 GO:GO:0007173
GO:GO:0045892 GO:GO:0043066 GO:GO:0006461 GO:GO:0030155
GO:GO:0071560 GO:GO:0019933 GO:GO:0070371 GO:GO:0071300
GO:GO:0030198 GO:GO:0014068 GO:GO:0007283 GO:GO:0003682
GO:GO:0003705 GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672
GO:GO:0071504 GO:GO:0001942 GO:GO:0032332 GO:GO:0060009
GO:GO:0090090 GO:GO:0071260 GO:GO:0035019 GO:GO:0001934
GO:GO:0090190 GO:GO:0071364 GO:GO:0031018 GO:GO:0043491
GO:GO:0014032 GO:GO:0001502 GO:GO:0045732 GO:GO:0001837
GO:GO:0050680 GO:GO:0001503 GO:GO:0001658 GO:GO:0071347
GO:GO:0001158 GO:GO:0030858 GO:GO:0048709 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0030879
GO:GO:0050679 GO:GO:0002053 GO:GO:0001046 GO:GO:0030502
GO:GO:2000138 GO:GO:0061036 GO:GO:0003203 GO:GO:0032331
GO:GO:0045662 GO:GO:0030916 GO:GO:2000020 GO:GO:0046533
GO:GO:0060174 GO:GO:0030903 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0060018 GO:GO:0035622 GO:GO:0072190
GO:GO:0072289 GO:GO:0072197 GO:GO:0003188
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 GO:GO:0003415
GO:GO:0060517 GO:GO:0060729 GO:GO:0002683 GO:GO:0060784 OMA:GAGHVWM
EMBL:AAEX03006327 Ensembl:ENSCAFT00000007033 Uniprot:F1PSM5
Length = 505
Score = 135 (52.6 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHISPNA 202
>MGI|MGI:98371 [details] [associations]
symbol:Sox9 "SRY-box containing gene 9" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISO] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO;IDA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IDA] [GO:0001501
"skeletal system development" evidence=ISO] [GO:0001502 "cartilage
condensation" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IMP] [GO:0001894 "tissue homeostasis" evidence=IMP]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IMP;IDA] [GO:0001942 "hair follicle development"
evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IMP] [GO:0002063 "chondrocyte development"
evidence=IMP] [GO:0002683 "negative regulation of immune system
process" evidence=IMP] [GO:0003170 "heart valve development"
evidence=IMP] [GO:0003179 "heart valve morphogenesis" evidence=IMP]
[GO:0003188 "heart valve formation" evidence=IMP] [GO:0003203
"endocardial cushion morphogenesis" evidence=IMP] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISO] [GO:0003415 "chondrocyte hypertrophy"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO;IMP;IDA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISO;IDA]
[GO:0004672 "protein kinase activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=ISO] [GO:0007165 "signal transduction" evidence=IMP]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=IDA] [GO:0007283 "spermatogenesis" evidence=IGI]
[GO:0007507 "heart development" evidence=IMP] [GO:0008013
"beta-catenin binding" evidence=IPI] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO;IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0008584 "male gonad development" evidence=ISO;IGI;IMP]
[GO:0010564 "regulation of cell cycle process" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=IGI]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=ISO;ISS] [GO:0014032 "neural crest cell development"
evidence=IMP] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0019100
"male germ-line sex determination" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IMP] [GO:0030198 "extracellular matrix
organization" evidence=IMP] [GO:0030238 "male sex determination"
evidence=IGI] [GO:0030279 "negative regulation of ossification"
evidence=IMP] [GO:0030502 "negative regulation of bone
mineralization" evidence=IMP] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IMP] [GO:0030916 "otic
vesicle formation" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IMP] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISO;IDA;IMP]
[GO:0034236 "protein kinase A catalytic subunit binding"
evidence=ISO] [GO:0035019 "somatic stem cell maintenance"
evidence=IMP] [GO:0035326 "enhancer binding" evidence=ISO;IDA]
[GO:0035622 "intrahepatic bile duct development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO;IMP] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043491 "protein kinase B signaling cascade" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IGI]
[GO:0045595 "regulation of cell differentiation" evidence=IMP]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=IDA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IMP;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;IMP;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IGI] [GO:0048709
"oligodendrocyte differentiation" evidence=IMP] [GO:0050679
"positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0051216 "cartilage development"
evidence=IMP] [GO:0060008 "Sertoli cell differentiation"
evidence=IMP] [GO:0060009 "Sertoli cell development" evidence=IGI]
[GO:0060018 "astrocyte fate commitment" evidence=IGI] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0060221
"retinal rod cell differentiation" evidence=IGI] [GO:0060350
"endochondral bone morphogenesis" evidence=IMP] [GO:0060512
"prostate gland morphogenesis" evidence=IMP] [GO:0060517
"epithelial cell proliferation involved in prostatic bud
elongation" evidence=IMP] [GO:0060729 "intestinal epithelial
structure maintenance" evidence=IMP] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IMP]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISO;IDA] [GO:0061138 "morphogenesis of a branching
epithelium" evidence=IGI] [GO:0070168 "negative regulation of
biomineral tissue development" evidence=IMP] [GO:0070371 "ERK1 and
ERK2 cascade" evidence=IDA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IDA] [GO:0071300 "cellular response
to retinoic acid" evidence=IDA] [GO:0071364 "cellular response to
epidermal growth factor stimulus" evidence=IDA] [GO:0071504
"cellular response to heparin" evidence=IDA] [GO:0071560 "cellular
response to transforming growth factor beta stimulus" evidence=ISO]
[GO:0072034 "renal vesicle induction" evidence=IMP] [GO:0072197
"ureter morphogenesis" evidence=IGI] [GO:0072289 "metanephric
nephron tubule formation" evidence=IGI] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IDA] [GO:0090103 "cochlea morphogenesis" evidence=IMP]
[GO:0090184 "positive regulation of kidney development"
evidence=IGI] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] [GO:2000020
"positive regulation of male gonad development" evidence=ISO]
[GO:2000138 "positive regulation of cell proliferation involved in
heart morphogenesis" evidence=IMP] [GO:2000741 "positive regulation
of mesenchymal stem cell differentiation" evidence=ISO]
InterPro:IPR009071 MGI:MGI:98371 Pfam:PF00505 GO:GO:0001708
GO:GO:0007173 GO:GO:0045892 GO:GO:0043066 GO:GO:0006461
GO:GO:0030155 GO:GO:0071560 GO:GO:0019933 GO:GO:0070371
GO:GO:0071300 GO:GO:0030198 GO:GO:0014068 GO:GO:0007283
GO:GO:0003682 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504 GO:GO:0001942
GO:GO:0032332 GO:GO:0060009 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0031018 GO:GO:0043491 GO:GO:0014032 GO:GO:0001502
GO:GO:0045732 GO:GO:0001837 GO:GO:0050680 GO:GO:0001503
GO:GO:0001658 GO:GO:0071347 GO:GO:0001158 GO:GO:0030858
GO:GO:0048709 GO:GO:0010634 GO:GO:0016585 GO:GO:0006334
GO:GO:0003413 GO:GO:0030879 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0030502 GO:GO:2000138 GO:GO:0061036
GO:GO:0003203 GO:GO:0032331 GO:GO:0045662 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0060174 GO:GO:0030903
GO:GO:0090103 GO:GO:0010564 GO:GO:0019100 GO:GO:0060018
GO:GO:0035622 GO:GO:0072190 GO:GO:0072289 GO:GO:0072197
GO:GO:0003188 eggNOG:NOG295709 GeneTree:ENSGT00670000097649
HOVERGEN:HBG002061 KO:K09270 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 OrthoDB:EOG4TXBRZ
GO:GO:0003415 GO:GO:0060517 GO:GO:0060729 GO:GO:0002683
GO:GO:0060784 CTD:6662 OMA:GAGHVWM EMBL:AF421878 EMBL:AK030187
EMBL:AK049986 EMBL:BC004064 EMBL:BC023796 EMBL:BC023808
EMBL:BC023953 EMBL:BC024958 EMBL:BC034264 EMBL:Z18958
IPI:IPI00131219 PIR:S30243 PIR:S52469 RefSeq:NP_035578.3
UniGene:Mm.286407 ProteinModelPortal:Q04887 SMR:Q04887
IntAct:Q04887 STRING:Q04887 PhosphoSite:Q04887 PRIDE:Q04887
Ensembl:ENSMUST00000000579 GeneID:20682 KEGG:mmu:20682
InParanoid:Q04887 NextBio:299193 Bgee:Q04887 CleanEx:MM_SOX9
Genevestigator:Q04887 GermOnline:ENSMUSG00000000567 Uniprot:Q04887
Length = 507
Score = 135 (52.6 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHISPNA 202
>UNIPROTKB|P48436 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9606 "Homo
sapiens" [GO:0001503 "ossification" evidence=IEA] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:0003188 "heart valve formation" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0014032 "neural crest cell
development" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030502 "negative regulation of
bone mineralization" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030903 "notochord development"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0035622 "intrahepatic bile duct development"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0043491 "protein kinase B signaling cascade"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0060009 "Sertoli cell
development" evidence=IEA] [GO:0060018 "astrocyte fate commitment"
evidence=IEA] [GO:0060174 "limb bud formation" evidence=IEA]
[GO:0072190 "ureter urothelium development" evidence=IEA]
[GO:0072197 "ureter morphogenesis" evidence=IEA] [GO:2000138
"positive regulation of cell proliferation involved in heart
morphogenesis" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEP;IMP] [GO:0001708 "cell fate specification"
evidence=ISS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0001942 "hair follicle development" evidence=ISS]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=ISS] [GO:0003203 "endocardial cushion morphogenesis"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=ISS] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=ISS] [GO:0035019 "somatic
stem cell maintenance" evidence=ISS] [GO:0042127 "regulation of
cell proliferation" evidence=ISS] [GO:0042981 "regulation of
apoptotic process" evidence=ISS] [GO:0045662 "negative regulation
of myoblast differentiation" evidence=ISS] [GO:0046533 "negative
regulation of photoreceptor cell differentiation" evidence=ISS]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IEP;ISS] [GO:0050680 "negative regulation of epithelial
cell proliferation" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=ISS] [GO:0060041 "retina development in
camera-type eye" evidence=ISS] [GO:0060221 "retinal rod cell
differentiation" evidence=ISS] [GO:0060517 "epithelial cell
proliferation involved in prostatic bud elongation" evidence=ISS]
[GO:0060784 "regulation of cell proliferation involved in tissue
homeostasis" evidence=ISS] [GO:0061138 "morphogenesis of a
branching epithelium" evidence=ISS] [GO:0072289 "metanephric
nephron tubule formation" evidence=ISS] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=ISS] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=ISS] [GO:0001894 "tissue homeostasis" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0003170 "heart valve development" evidence=ISS]
[GO:0030279 "negative regulation of ossification" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0034236 "protein kinase A
catalytic subunit binding" evidence=IPI] [GO:0071347 "cellular
response to interleukin-1" evidence=IEP] [GO:0030850 "prostate
gland development" evidence=IEP] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISS] [GO:0007173 "epidermal
growth factor receptor signaling pathway" evidence=ISS] [GO:0070371
"ERK1 and ERK2 cascade" evidence=ISS] [GO:0071260 "cellular
response to mechanical stimulus" evidence=ISS] [GO:0071364
"cellular response to epidermal growth factor stimulus"
evidence=ISS] [GO:0071504 "cellular response to heparin"
evidence=ISS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=IDA] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=IDA] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=IMP;IDA]
[GO:0071560 "cellular response to transforming growth factor beta
stimulus" evidence=IDA] [GO:0061036 "positive regulation of
cartilage development" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IDA] [GO:0006461 "protein
complex assembly" evidence=IDA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IDA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0072034 "renal vesicle induction"
evidence=ISS] [GO:0090184 "positive regulation of kidney
development" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:0035326 "enhancer binding" evidence=IDA] [GO:0019933
"cAMP-mediated signaling" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IMP;IDA] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0003413 "chondrocyte differentiation
involved in endochondral bone morphogenesis" evidence=IMP]
[GO:0071300 "cellular response to retinoic acid" evidence=IEP]
[GO:0010564 "regulation of cell cycle process" evidence=IMP]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS;IMP] [GO:0003415 "chondrocyte
hypertrophy" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0004672
"protein kinase activity" evidence=ISS] [GO:2000020 "positive
regulation of male gonad development" evidence=IDA] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IMP]
[GO:0001502 "cartilage condensation" evidence=ISS] [GO:0003179
"heart valve morphogenesis" evidence=ISS] [GO:0030916 "otic vesicle
formation" evidence=ISS] [GO:0051216 "cartilage development"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0090103 "cochlea morphogenesis"
evidence=ISS] [GO:0070168 "negative regulation of biomineral tissue
development" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0001708 GO:GO:0007173
GO:GO:0045892 GO:GO:0043066 GO:GO:0006461 GO:GO:0030155
GO:GO:0071560 GO:GO:0019933 GO:GO:0070371 GO:GO:0071300
GO:GO:0030198 GO:GO:0014068 GO:GO:0007283 GO:GO:0003682
GO:GO:0003705 GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672
GO:GO:0071504 GO:GO:0001942 EMBL:CH471099 GO:GO:0032332
GO:GO:0030279 GO:GO:0060009 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0031018 GO:GO:0043491 GO:GO:0014032 GO:GO:0001502
GO:GO:0045732 GO:GO:0001837 GO:GO:0050680 GO:GO:0001503
GO:GO:0001658 GO:GO:0071347 GO:GO:0001158 GO:GO:0030858
GO:GO:0048709 GO:GO:0010634 GO:GO:0016585 GO:GO:0006334
GO:GO:0003413 GO:GO:0030879 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0030502 GO:GO:2000138 GO:GO:0061036
GO:GO:0003203 GO:GO:0032331 GO:GO:0045662 GO:GO:0060008
GO:GO:0030916 GO:GO:2000020 GO:GO:0046533 GO:GO:0060174
GO:GO:0030903 GO:GO:0090103 GO:GO:0010564 GO:GO:0019100
GO:GO:0003179 GO:GO:0070168 GO:GO:0060018 GO:GO:0035622
GO:GO:0072190 GO:GO:0072289 GO:GO:0072197 GO:GO:0003188
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 GO:GO:2000741 GO:GO:0072034
GO:GO:0060221 OrthoDB:EOG4TXBRZ GO:GO:0003415 GO:GO:0060517
GO:GO:0060729 GO:GO:0002683 GO:GO:0060784 CTD:6662 EMBL:Z46629
EMBL:S74506 EMBL:S74504 EMBL:S74505 EMBL:BT006875 EMBL:BC007951
EMBL:BC056420 IPI:IPI00009713 PIR:A55204 RefSeq:NP_000337.1
UniGene:Hs.647409 PDB:1S9M PDB:1SX9 PDB:4EUW PDBsum:1S9M
PDBsum:1SX9 PDBsum:4EUW ProteinModelPortal:P48436 SMR:P48436
IntAct:P48436 STRING:P48436 PhosphoSite:P48436 DMDM:1351096
PRIDE:P48436 DNASU:6662 Ensembl:ENST00000245479 GeneID:6662
KEGG:hsa:6662 UCSC:uc002jiw.3 GeneCards:GC17P070117 HGNC:HGNC:11204
HPA:CAB022456 HPA:HPA001758 MIM:114290 MIM:278850 MIM:608160
neXtProt:NX_P48436 Orphanet:140 Orphanet:2138 PharmGKB:PA36041
InParanoid:P48436 OMA:GAGHVWM PhylomeDB:P48436 GenomeRNAi:6662
NextBio:25973 ArrayExpress:P48436 Bgee:P48436 CleanEx:HS_SOX9
Genevestigator:P48436 GermOnline:ENSG00000125398 Uniprot:P48436
Length = 509
Score = 135 (52.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHISPNA 202
>UNIPROTKB|P61753 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9544
"Macaca mulatta" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=ISS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISS] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=ISS] [GO:0001501 "skeletal system development"
evidence=ISS] [GO:0001502 "cartilage condensation" evidence=ISS]
[GO:0001708 "cell fate specification" evidence=ISS] [GO:0001837
"epithelial to mesenchymal transition" evidence=ISS] [GO:0001894
"tissue homeostasis" evidence=ISS] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISS] [GO:0001942 "hair
follicle development" evidence=ISS] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0003170 "heart valve development" evidence=ISS]
[GO:0003179 "heart valve morphogenesis" evidence=ISS] [GO:0003203
"endocardial cushion morphogenesis" evidence=ISS] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0003415 "chondrocyte hypertrophy"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0006461 "protein complex assembly"
evidence=ISS] [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0008584 "male
gonad development" evidence=ISS] [GO:0010564 "regulation of cell
cycle process" evidence=ISS] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISS] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0030279
"negative regulation of ossification" evidence=ISS] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=ISS] [GO:0030916 "otic vesicle formation" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0035019 "somatic stem cell
maintenance" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0042981 "regulation of apoptotic process"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043491 "protein kinase B signaling cascade" evidence=ISS]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0060008
"Sertoli cell differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=ISS]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISS] [GO:0061138 "morphogenesis of a branching epithelium"
evidence=ISS] [GO:0070168 "negative regulation of biomineral tissue
development" evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade"
evidence=ISS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=ISS] [GO:0071364 "cellular response to epidermal
growth factor stimulus" evidence=ISS] [GO:0071504 "cellular
response to heparin" evidence=ISS] [GO:0071560 "cellular response
to transforming growth factor beta stimulus" evidence=ISS]
[GO:0072034 "renal vesicle induction" evidence=ISS] [GO:0072289
"metanephric nephron tubule formation" evidence=ISS] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=ISS] [GO:0090103 "cochlea morphogenesis" evidence=ISS]
[GO:0090184 "positive regulation of kidney development"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:2000020
"positive regulation of male gonad development" evidence=ISS]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0071560 GO:GO:0019933 GO:GO:0070371
GO:GO:0014068 GO:GO:0007283 GO:GO:0003682 GO:GO:0003705
GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504
GO:GO:0001942 GO:GO:0032332 GO:GO:0030279 GO:GO:0090090
GO:GO:0071260 GO:GO:0035019 GO:GO:0001934 GO:GO:0090190
GO:GO:0071364 GO:GO:0043491 GO:GO:0001502 GO:GO:0001837
GO:GO:0050680 GO:GO:0001158 GO:GO:0030858 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0050679
GO:GO:0002053 GO:GO:0001046 GO:GO:0061036 GO:GO:0003203
GO:GO:0032331 GO:GO:0045662 GO:GO:0060008 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0003179 GO:GO:0070168 GO:GO:0072289
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 GO:GO:2000741 GO:GO:0072034
GO:GO:0060221 OrthoDB:EOG4TXBRZ GO:GO:0003415 GO:GO:0060517
GO:GO:0060729 GO:GO:0002683 GO:GO:0060784 CTD:6662 EMBL:AF322900
RefSeq:NP_001028040.1 UniGene:Mmu.3543 ProteinModelPortal:P61753
SMR:P61753 STRING:P61753 PRIDE:P61753 GeneID:574208 KEGG:mcc:574208
InParanoid:P61753 NextBio:19987290 Uniprot:P61753
Length = 509
Score = 135 (52.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHISPNA 202
>UNIPROTKB|P61754 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9600
"Pongo pygmaeus" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=ISS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISS] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=ISS] [GO:0001501 "skeletal system development"
evidence=ISS] [GO:0001502 "cartilage condensation" evidence=ISS]
[GO:0001708 "cell fate specification" evidence=ISS] [GO:0001837
"epithelial to mesenchymal transition" evidence=ISS] [GO:0001894
"tissue homeostasis" evidence=ISS] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISS] [GO:0001942 "hair
follicle development" evidence=ISS] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0003170 "heart valve development" evidence=ISS]
[GO:0003179 "heart valve morphogenesis" evidence=ISS] [GO:0003203
"endocardial cushion morphogenesis" evidence=ISS] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0003415 "chondrocyte hypertrophy"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0006461 "protein complex assembly"
evidence=ISS] [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0008584 "male
gonad development" evidence=ISS] [GO:0010564 "regulation of cell
cycle process" evidence=ISS] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISS] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0030279
"negative regulation of ossification" evidence=ISS] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=ISS] [GO:0030916 "otic vesicle formation" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0035019 "somatic stem cell
maintenance" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0042981 "regulation of apoptotic process"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043491 "protein kinase B signaling cascade" evidence=ISS]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0060008
"Sertoli cell differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=ISS]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISS] [GO:0061138 "morphogenesis of a branching epithelium"
evidence=ISS] [GO:0070168 "negative regulation of biomineral tissue
development" evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade"
evidence=ISS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=ISS] [GO:0071364 "cellular response to epidermal
growth factor stimulus" evidence=ISS] [GO:0071504 "cellular
response to heparin" evidence=ISS] [GO:0071560 "cellular response
to transforming growth factor beta stimulus" evidence=ISS]
[GO:0072034 "renal vesicle induction" evidence=ISS] [GO:0072289
"metanephric nephron tubule formation" evidence=ISS] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=ISS] [GO:0090103 "cochlea morphogenesis" evidence=ISS]
[GO:0090184 "positive regulation of kidney development"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:2000020
"positive regulation of male gonad development" evidence=ISS]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0071560 GO:GO:0019933 GO:GO:0070371
GO:GO:0014068 GO:GO:0007283 GO:GO:0003682 GO:GO:0003705
GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504
GO:GO:0001942 GO:GO:0032332 GO:GO:0030279 GO:GO:0090090
GO:GO:0071260 GO:GO:0035019 GO:GO:0001934 GO:GO:0090190
GO:GO:0071364 GO:GO:0043491 GO:GO:0001502 GO:GO:0001837
GO:GO:0050680 GO:GO:0001158 GO:GO:0030858 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0050679
GO:GO:0002053 GO:GO:0001046 GO:GO:0061036 GO:GO:0003203
GO:GO:0032331 GO:GO:0045662 GO:GO:0060008 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0003179 GO:GO:0070168 GO:GO:0072289
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061
InterPro:IPR022151 Pfam:PF12444 GO:GO:2000741 GO:GO:0072034
GO:GO:0060221 GO:GO:0003415 GO:GO:0060517 GO:GO:0060729
GO:GO:0002683 GO:GO:0060784 EMBL:AF322898 ProteinModelPortal:P61754
SMR:P61754 STRING:P61754 PRIDE:P61754 InParanoid:P61754
Uniprot:P61754
Length = 509
Score = 135 (52.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHISPNA 202
>UNIPROTKB|Q9BG89 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9598 "Pan
troglodytes" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=ISS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISS] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=ISS] [GO:0001501 "skeletal system development"
evidence=ISS] [GO:0001502 "cartilage condensation" evidence=ISS]
[GO:0001708 "cell fate specification" evidence=ISS] [GO:0001837
"epithelial to mesenchymal transition" evidence=ISS] [GO:0001894
"tissue homeostasis" evidence=ISS] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISS] [GO:0001942 "hair
follicle development" evidence=ISS] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0003170 "heart valve development" evidence=ISS]
[GO:0003179 "heart valve morphogenesis" evidence=ISS] [GO:0003203
"endocardial cushion morphogenesis" evidence=ISS] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0003415 "chondrocyte hypertrophy"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0004672 "protein kinase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0006468
"protein phosphorylation" evidence=ISS] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0008284 "positive regulation of
cell proliferation" evidence=ISS] [GO:0010564 "regulation of cell
cycle process" evidence=ISS] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISS] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0030279
"negative regulation of ossification" evidence=ISS] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=ISS] [GO:0030916 "otic vesicle formation" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0035019 "somatic stem cell
maintenance" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0042981 "regulation of apoptotic process"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043491 "protein kinase B signaling cascade" evidence=ISS]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0060008
"Sertoli cell differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=ISS]
[GO:0061138 "morphogenesis of a branching epithelium" evidence=ISS]
[GO:0070168 "negative regulation of biomineral tissue development"
evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade" evidence=ISS]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=ISS] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=ISS] [GO:0071504 "cellular response to
heparin" evidence=ISS] [GO:0072034 "renal vesicle induction"
evidence=ISS] [GO:0072289 "metanephric nephron tubule formation"
evidence=ISS] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISS] [GO:0090103 "cochlea
morphogenesis" evidence=ISS] [GO:0090184 "positive regulation of
kidney development" evidence=ISS] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000020 "positive regulation of male gonad development"
evidence=ISS] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0019933 GO:GO:0070371 GO:GO:0014068
GO:GO:0007283 GO:GO:0003682 GO:GO:0003705 GO:GO:0001077
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504 GO:GO:0001942
GO:GO:0032332 GO:GO:0030279 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0043491 GO:GO:0001502 GO:GO:0001837 GO:GO:0050680
GO:GO:0001158 GO:GO:0030858 GO:GO:0010634 GO:GO:0016585
GO:GO:0006334 GO:GO:0003413 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0003203 GO:GO:0032331 GO:GO:0045662
GO:GO:0060008 GO:GO:0030916 GO:GO:2000020 GO:GO:0046533
GO:GO:0090103 GO:GO:0010564 GO:GO:0019100 GO:GO:0003179
GO:GO:0070168 GO:GO:0072289 eggNOG:NOG295709 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 OrthoDB:EOG4TXBRZ
GO:GO:0003415 GO:GO:0060517 GO:GO:0060729 GO:GO:0002683
GO:GO:0060784 CTD:6662 EMBL:AF322902 RefSeq:NP_001009029.1
UniGene:Ptr.6522 ProteinModelPortal:Q9BG89 SMR:Q9BG89 STRING:Q9BG89
GeneID:450101 KEGG:ptr:450101 InParanoid:Q9BG89 NextBio:20833065
Uniprot:Q9BG89
Length = 509
Score = 135 (52.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHISPNA 202
>UNIPROTKB|Q9BG91 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9483
"Callithrix jacchus" [GO:0001046 "core promoter sequence-specific
DNA binding" evidence=ISS] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISS] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0001502 "cartilage
condensation" evidence=ISS] [GO:0001708 "cell fate specification"
evidence=ISS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0001894 "tissue homeostasis" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0001942 "hair follicle development" evidence=ISS]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=ISS] [GO:0002683 "negative regulation of immune system
process" evidence=ISS] [GO:0003170 "heart valve development"
evidence=ISS] [GO:0003179 "heart valve morphogenesis" evidence=ISS]
[GO:0003203 "endocardial cushion morphogenesis" evidence=ISS]
[GO:0003413 "chondrocyte differentiation involved in endochondral
bone morphogenesis" evidence=ISS] [GO:0003415 "chondrocyte
hypertrophy" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004672 "protein kinase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006334 "nucleosome
assembly" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0007173 "epidermal growth
factor receptor signaling pathway" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0008284 "positive regulation of
cell proliferation" evidence=ISS] [GO:0010564 "regulation of cell
cycle process" evidence=ISS] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISS] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0030279
"negative regulation of ossification" evidence=ISS] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=ISS] [GO:0030916 "otic vesicle formation" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0035019 "somatic stem cell
maintenance" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0042981 "regulation of apoptotic process"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043491 "protein kinase B signaling cascade" evidence=ISS]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0060008
"Sertoli cell differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=ISS]
[GO:0061138 "morphogenesis of a branching epithelium" evidence=ISS]
[GO:0070168 "negative regulation of biomineral tissue development"
evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade" evidence=ISS]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=ISS] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=ISS] [GO:0071504 "cellular response to
heparin" evidence=ISS] [GO:0072034 "renal vesicle induction"
evidence=ISS] [GO:0072289 "metanephric nephron tubule formation"
evidence=ISS] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISS] [GO:0090103 "cochlea
morphogenesis" evidence=ISS] [GO:0090184 "positive regulation of
kidney development" evidence=ISS] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000020 "positive regulation of male gonad development"
evidence=ISS] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0019933 GO:GO:0070371 GO:GO:0014068
GO:GO:0007283 GO:GO:0003682 GO:GO:0003705 GO:GO:0001077
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504 GO:GO:0001942
GO:GO:0032332 GO:GO:0030279 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0043491 GO:GO:0001502 GO:GO:0001837 GO:GO:0050680
GO:GO:0001158 GO:GO:0030858 GO:GO:0010634 GO:GO:0016585
GO:GO:0006334 GO:GO:0003413 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0003203 GO:GO:0032331 GO:GO:0045662
GO:GO:0060008 GO:GO:0030916 GO:GO:2000020 GO:GO:0046533
GO:GO:0090103 GO:GO:0010564 GO:GO:0019100 GO:GO:0003179
GO:GO:0070168 GO:GO:0072289 HOVERGEN:HBG002061 InterPro:IPR022151
Pfam:PF12444 GO:GO:2000741 GO:GO:0072034 GO:GO:0060221
EMBL:AF322899 ProteinModelPortal:Q9BG91 SMR:Q9BG91
OrthoDB:EOG4TXBRZ GO:GO:0003415 GO:GO:0060517 GO:GO:0060729
GO:GO:0002683 GO:GO:0060784 Uniprot:Q9BG91
Length = 509
Score = 135 (52.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHISPNA 202
>UNIPROTKB|F1RV30 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9823 "Sus
scrofa" [GO:0035622 "intrahepatic bile duct development"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0034236 "protein kinase A catalytic subunit
binding" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0030916 "otic vesicle formation" evidence=IEA] [GO:0030903
"notochord development" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0019933
"cAMP-mediated signaling" evidence=IEA] [GO:0019100 "male germ-line
sex determination" evidence=IEA] [GO:0014068 "positive regulation
of phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0014032
"neural crest cell development" evidence=IEA] [GO:0010634 "positive
regulation of epithelial cell migration" evidence=IEA] [GO:0010564
"regulation of cell cycle process" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003415 "chondrocyte hypertrophy"
evidence=IEA] [GO:0003413 "chondrocyte differentiation involved in
endochondral bone morphogenesis" evidence=IEA] [GO:0003203
"endocardial cushion morphogenesis" evidence=IEA] [GO:0003188
"heart valve formation" evidence=IEA] [GO:0002683 "negative
regulation of immune system process" evidence=IEA] [GO:0002053
"positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001502
"cartilage condensation" evidence=IEA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IEA] [GO:2000741
"positive regulation of mesenchymal stem cell differentiation"
evidence=IEA] [GO:2000138 "positive regulation of cell
proliferation involved in heart morphogenesis" evidence=IEA]
[GO:2000020 "positive regulation of male gonad development"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0090103
"cochlea morphogenesis" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0072289 "metanephric nephron tubule formation"
evidence=IEA] [GO:0072197 "ureter morphogenesis" evidence=IEA]
[GO:0072190 "ureter urothelium development" evidence=IEA]
[GO:0072034 "renal vesicle induction" evidence=IEA] [GO:0071560
"cellular response to transforming growth factor beta stimulus"
evidence=IEA] [GO:0071504 "cellular response to heparin"
evidence=IEA] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0071300 "cellular response to
retinoic acid" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0070371 "ERK1 and ERK2
cascade" evidence=IEA] [GO:0061036 "positive regulation of
cartilage development" evidence=IEA] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IEA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=IEA] [GO:0060221 "retinal rod
cell differentiation" evidence=IEA] [GO:0060174 "limb bud
formation" evidence=IEA] [GO:0060018 "astrocyte fate commitment"
evidence=IEA] [GO:0060009 "Sertoli cell development" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0030155 GO:GO:0071560 GO:GO:0019933
GO:GO:0070371 GO:GO:0071300 GO:GO:0030198 GO:GO:0014068
GO:GO:0007283 GO:GO:0003682 GO:GO:0003705 GO:GO:0001077
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504 GO:GO:0001942
GO:GO:0032332 GO:GO:0060009 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0031018 GO:GO:0043491 GO:GO:0014032 GO:GO:0001502
GO:GO:0045732 GO:GO:0001837 GO:GO:0050680 GO:GO:0001503
GO:GO:0001658 GO:GO:0071347 GO:GO:0001158 GO:GO:0030858
GO:GO:0048709 GO:GO:0010634 GO:GO:0016585 GO:GO:0006334
GO:GO:0003413 GO:GO:0030879 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0030502 GO:GO:2000138 GO:GO:0061036
GO:GO:0003203 GO:GO:0032331 GO:GO:0045662 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0060174 GO:GO:0030903
GO:GO:0090103 GO:GO:0010564 GO:GO:0019100 GO:GO:0060018
GO:GO:0035622 GO:GO:0072190 GO:GO:0072289 GO:GO:0072197
GO:GO:0003188 GeneTree:ENSGT00670000097649 InterPro:IPR022151
Pfam:PF12444 GO:GO:2000741 GO:GO:0072034 GO:GO:0060221
GO:GO:0003415 GO:GO:0060517 GO:GO:0060729 GO:GO:0002683
GO:GO:0060784 OMA:GAGHVWM EMBL:CU640384 Ensembl:ENSSSCT00000018780
ArrayExpress:F1RV30 Uniprot:F1RV30
Length = 511
Score = 135 (52.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHISPNA 202
>UNIPROTKB|Q7YRJ7 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9615
"Canis lupus familiaris" [GO:0006468 "protein phosphorylation"
evidence=ISS] [GO:0010564 "regulation of cell cycle process"
evidence=ISS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=ISS] [GO:0003170 "heart valve
development" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0060784 "regulation of cell proliferation involved in tissue
homeostasis" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=ISS] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=ISS] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISS] [GO:2000741 "positive regulation of
mesenchymal stem cell differentiation" evidence=ISS] [GO:2000020
"positive regulation of male gonad development" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0006334 "nucleosome
assembly" evidence=ISS] [GO:0071504 "cellular response to heparin"
evidence=ISS] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=ISS] [GO:0071260 "cellular response to
mechanical stimulus" evidence=ISS] [GO:0070371 "ERK1 and ERK2
cascade" evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0010634 "positive regulation
of epithelial cell migration" evidence=ISS] [GO:0070168 "negative
regulation of biomineral tissue development" evidence=ISS]
[GO:0030279 "negative regulation of ossification" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0001894 "tissue homeostasis" evidence=ISS]
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=ISS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0061138 "morphogenesis of a branching epithelium" evidence=ISS]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=ISS] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=ISS] [GO:0060221 "retinal rod
cell differentiation" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=ISS] [GO:0060041 "retina development in
camera-type eye" evidence=ISS] [GO:0072289 "metanephric nephron
tubule formation" evidence=ISS] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISS] [GO:0090103
"cochlea morphogenesis" evidence=ISS] [GO:0051216 "cartilage
development" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0003415
"chondrocyte hypertrophy" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=ISS] [GO:0046533 "negative regulation of photoreceptor
cell differentiation" evidence=ISS] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISS] [GO:0042981
"regulation of apoptotic process" evidence=ISS] [GO:0042127
"regulation of cell proliferation" evidence=ISS] [GO:0035019
"somatic stem cell maintenance" evidence=ISS] [GO:0030916 "otic
vesicle formation" evidence=ISS] [GO:0030858 "positive regulation
of epithelial cell differentiation" evidence=ISS] [GO:0019100 "male
germ-line sex determination" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0003203
"endocardial cushion morphogenesis" evidence=ISS] [GO:0003179
"heart valve morphogenesis" evidence=ISS] [GO:0001708 "cell fate
specification" evidence=ISS] [GO:0001837 "epithelial to mesenchymal
transition" evidence=ISS] [GO:0001942 "hair follicle development"
evidence=ISS] [GO:0001502 "cartilage condensation" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0032332
"positive regulation of chondrocyte differentiation" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0006461
"protein complex assembly" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0090184 "positive regulation of kidney
development" evidence=ISS] [GO:0072034 "renal vesicle induction"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0001708
GO:GO:0007173 GO:GO:0045892 GO:GO:0043066 GO:GO:0006461
GO:GO:0019933 GO:GO:0070371 GO:GO:0014068 GO:GO:0007283
GO:GO:0003682 GO:GO:0003705 GO:GO:0001077 GO:GO:0006338
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0004672 GO:GO:0071504 GO:GO:0001942 GO:GO:0032332
GO:GO:0030279 GO:GO:0090090 GO:GO:0071260 GO:GO:0035019
GO:GO:0001934 GO:GO:0090190 GO:GO:0071364 GO:GO:0043491
GO:GO:0001502 GO:GO:0001837 GO:GO:0050680 GO:GO:0001158
GO:GO:0030858 GO:GO:0010634 GO:GO:0016585 GO:GO:0006334
GO:GO:0003413 GO:GO:0050679 GO:GO:0002053 GO:GO:0001046
GO:GO:0003203 GO:GO:0032331 GO:GO:0045662 GO:GO:0060008
GO:GO:0030916 GO:GO:2000020 GO:GO:0046533 GO:GO:0090103
GO:GO:0010564 GO:GO:0019100 GO:GO:0003179 GO:GO:0070168
GO:GO:0072289 eggNOG:NOG295709 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 OrthoDB:EOG4TXBRZ
GO:GO:0003415 GO:GO:0060517 GO:GO:0060729 GO:GO:0002683
GO:GO:0060784 EMBL:AY237827 RefSeq:NP_001002978.1 UniGene:Cfa.175
ProteinModelPortal:Q7YRJ7 SMR:Q7YRJ7 STRING:Q7YRJ7 GeneID:403464
KEGG:cfa:403464 CTD:6662 NextBio:20816981 Uniprot:Q7YRJ7
Length = 513
Score = 135 (52.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + A T S NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQAEAEEATEQTHISPNA 202
>UNIPROTKB|P57073 [details] [associations]
symbol:SOX8 "Transcription factor SOX-8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0046533 "negative regulation of photoreceptor
cell differentiation" evidence=IEA] [GO:0048469 "cell maturation"
evidence=IEA] [GO:0060018 "astrocyte fate commitment" evidence=IEA]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0001755
"neural crest cell migration" evidence=ISS] [GO:0014015 "positive
regulation of gliogenesis" evidence=ISS] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISS] [GO:0048484 "enteric
nervous system development" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0001649 "osteoblast differentiation"
evidence=ISS] [GO:0001701 "in utero embryonic development"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0007422 "peripheral nervous system development" evidence=ISS]
[GO:0010817 "regulation of hormone levels" evidence=ISS]
[GO:0033690 "positive regulation of osteoblast proliferation"
evidence=ISS] [GO:0045444 "fat cell differentiation" evidence=ISS]
[GO:0045165 "cell fate commitment" evidence=ISS] [GO:0060009
"Sertoli cell development" evidence=ISS] [GO:0048709
"oligodendrocyte differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0061138 "morphogenesis
of a branching epithelium" evidence=ISS] [GO:0072197 "ureter
morphogenesis" evidence=ISS] [GO:0072289 "metanephric nephron
tubule formation" evidence=ISS] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0072034 "renal vesicle induction" evidence=ISS] [GO:0090184
"positive regulation of kidney development" evidence=ISS]
[GO:0090190 "positive regulation of branching involved in ureteric
bud morphogenesis" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0008584 "male
gonad development" evidence=ISS] [GO:0045662 "negative regulation
of myoblast differentiation" evidence=ISS] [GO:0060612 "adipose
tissue development" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0007165 GO:GO:0043066
GO:GO:0001755 GO:GO:0001701 GO:GO:0045944 GO:GO:0007422
GO:GO:0060612 GO:GO:0003700 GO:GO:0007283 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0060009 GO:GO:0090190 GO:GO:0001649 GO:GO:0045444
GO:GO:0000979 GO:GO:0048709 GO:GO:0048484 GO:GO:0010817
GO:GO:0048469 GO:GO:0033690 GO:GO:0045662 GO:GO:0046533
EMBL:AE006465 GO:GO:0060018 GO:GO:0014015 GO:GO:0072289
GO:GO:0072197 HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 CTD:30812 eggNOG:NOG324597
OrthoDB:EOG4ZKJMD EMBL:AF226675 EMBL:Z99757 EMBL:BC031797
EMBL:AF164104 IPI:IPI00299069 RefSeq:NP_055402.2 UniGene:Hs.243678
ProteinModelPortal:P57073 SMR:P57073 IntAct:P57073 STRING:P57073
PhosphoSite:P57073 DMDM:10720294 PRIDE:P57073
Ensembl:ENST00000293894 GeneID:30812 KEGG:hsa:30812 UCSC:uc002ckn.3
GeneCards:GC16P001033 HGNC:HGNC:11203 HPA:HPA041640 MIM:605923
neXtProt:NX_P57073 PharmGKB:PA36040 InParanoid:P57073 OMA:DQSHGSP
PhylomeDB:P57073 ChiTaRS:SOX8 GenomeRNAi:30812 NextBio:52860
Bgee:P57073 CleanEx:HS_SOX8 Genevestigator:P57073
GermOnline:ENSG00000005513 GO:GO:0061138 GO:GO:0072034
GO:GO:0060221 Uniprot:P57073
Length = 446
Score = 134 (52.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 28/79 (35%), Positives = 40/79 (50%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGA-PAPTSASNAFP 60
EKRPF++EA+RLR H K+HPDYKY+PRR+ ++ G P + A
Sbjct: 147 EKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEA 206
Query: 61 SFPLPPYFANHGGGSHPHP 79
+ +H G +H P
Sbjct: 207 GLGDGHHHGDHTGQTHGPP 225
>UNIPROTKB|F1PHT3 [details] [associations]
symbol:SOX10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0048546 "digestive tract
morphogenesis" evidence=IEA] [GO:0048484 "enteric nervous system
development" evidence=IEA] [GO:0048469 "cell maturation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0031315
"extrinsic to mitochondrial outer membrane" evidence=IEA]
[GO:0030318 "melanocyte differentiation" evidence=IEA] [GO:0014015
"positive regulation of gliogenesis" evidence=IEA] [GO:0007422
"peripheral nervous system development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043066 GO:GO:0001755 GO:GO:0001701
GO:GO:0045944 GO:GO:0007422 GO:GO:0003682 GO:GO:0003705
GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589 GO:GO:0090090
GO:GO:0030318 GO:GO:0048709 GO:GO:0031315 GO:GO:0048484
GO:GO:0002052 GO:GO:0048546 GO:GO:0048469 GO:GO:0014015 CTD:6663
GeneTree:ENSGT00670000097649 KO:K09270 InterPro:IPR022151
Pfam:PF12444 OMA:YYGHSSQ EMBL:AAEX03007323 RefSeq:XP_538379.3
Ensembl:ENSCAFT00000002231 GeneID:481258 KEGG:cfa:481258
Uniprot:F1PHT3
Length = 468
Score = 134 (52.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---TPGQS-IPNNKSPNQGAPA 51
+KRPFI+EA+RLR H K+HPDYKY+PRR+ G+S P ++ GA A
Sbjct: 151 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGESECPGGEAEQGGAAA 204
>UNIPROTKB|F1N6W0 [details] [associations]
symbol:SOX10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0048484 "enteric nervous system development"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0031315 "extrinsic to
mitochondrial outer membrane" evidence=IEA] [GO:0030318 "melanocyte
differentiation" evidence=IEA] [GO:0014015 "positive regulation of
gliogenesis" evidence=IEA] [GO:0007422 "peripheral nervous system
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0000980 "RNA polymerase II
distal enhancer sequence-specific DNA binding" evidence=IEA]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0043066 GO:GO:0001755
GO:GO:0001701 GO:GO:0045944 GO:GO:0007422 GO:GO:0003682
GO:GO:0003705 GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589
GO:GO:0090090 GO:GO:0030318 GO:GO:0048709 GO:GO:0031315
GO:GO:0048484 GO:GO:0002052 GO:GO:0048546 GO:GO:0048469
GO:GO:0014015 CTD:6663 GeneTree:ENSGT00670000097649 KO:K09270
InterPro:IPR022151 Pfam:PF12444 OMA:YYGHSSQ EMBL:DAAA02014653
EMBL:DAAA02014645 EMBL:DAAA02014646 EMBL:DAAA02014647
EMBL:DAAA02014648 EMBL:DAAA02014649 EMBL:DAAA02014650
EMBL:DAAA02014651 EMBL:DAAA02014652 IPI:IPI00718217
RefSeq:NP_001180176.1 UniGene:Bt.22876 Ensembl:ENSBTAT00000034677
GeneID:353115 KEGG:bta:353115 NextBio:20812699 Uniprot:F1N6W0
Length = 469
Score = 134 (52.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---TPGQS-IPNNKSPNQGAPA 51
+KRPFI+EA+RLR H K+HPDYKY+PRR+ G+S P ++ GA A
Sbjct: 152 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGESECPGGEAEQGGAAA 205
>UNIPROTKB|A5A763 [details] [associations]
symbol:SOX10 "Transcription factor SOX-10" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 CTD:6663 eggNOG:NOG295709 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 OrthoDB:EOG41C6WH InterPro:IPR022151
Pfam:PF12444 EMBL:AB271933 RefSeq:NP_001093403.1 UniGene:Ssc.27602
ProteinModelPortal:A5A763 SMR:A5A763 STRING:A5A763 GeneID:414903
KEGG:ssc:414903 Uniprot:A5A763
Length = 469
Score = 134 (52.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---TPGQS-IPNNKSPNQGAPA 51
+KRPFI+EA+RLR H K+HPDYKY+PRR+ G+S P ++ GA A
Sbjct: 152 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGESECPGGEAEQGGAAA 205
>UNIPROTKB|B7ZR65 [details] [associations]
symbol:sox9-a "Transcription factor Sox-9-A" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0014029 "neural crest formation" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0043049 "otic
placode formation" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0051216 "cartilage development"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0007506 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0051216 GO:GO:0043049 GO:GO:0014029
InterPro:IPR022151 Pfam:PF12444 EMBL:AY035397 EMBL:BC170058
EMBL:BC170060 RefSeq:NP_001084276.1 UniGene:Xl.1690 GeneID:399405
KEGG:xla:399405 CTD:399405 Xenbase:XB-GENE-6253910 Uniprot:B7ZR65
Length = 477
Score = 134 (52.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS-NA 58
EKRPF++EA+RLR H K+HPDYKY+PRR+ +S+ N ++ + T S NA
Sbjct: 150 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR-----KSVKNGQTEQEDGAEQTHISPNA 202
>UNIPROTKB|Q9W757 [details] [associations]
symbol:SOX10 "Transcription factor SOX-10" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001755 "neural
crest cell migration" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007422 "peripheral nervous system
development" evidence=IEA] [GO:0014015 "positive regulation of
gliogenesis" evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0031315 "extrinsic to mitochondrial outer
membrane" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0048546 "digestive
tract morphogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0048709 "oligodendrocyte differentiation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0060959 "cardiac
neuron development" evidence=IEP] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043066 GO:GO:0045944 GO:GO:0003682
GO:GO:0003705 GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589
GO:GO:0090090 GO:GO:0030318 GO:GO:0031315 EMBL:AF152356
EMBL:AJ245601 IPI:IPI00599244 RefSeq:NP_990123.1 UniGene:Gga.4428
ProteinModelPortal:Q9W757 SMR:Q9W757 STRING:Q9W757
Ensembl:ENSGALT00000020083 GeneID:395573 KEGG:gga:395573 CTD:6663
eggNOG:NOG295709 GeneTree:ENSGT00670000097649 HOGENOM:HOG000108876
HOVERGEN:HBG002061 InParanoid:Q9W757 KO:K09270 OMA:GPSMASD
OrthoDB:EOG41C6WH NextBio:20815647 GO:GO:0060959 InterPro:IPR022151
Pfam:PF12444 Uniprot:Q9W757
Length = 461
Score = 132 (51.5 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 38/119 (31%), Positives = 56/119 (47%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
+KRPFI+EA+RLR H K+HPDYKY+PRR+ N K+ QG A +
Sbjct: 143 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRK--------NGKA-TQGEGEGQVEGEAGGA 193
Query: 62 FPLPPYFAN-HGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQTSQADTK 119
+ ++ N H HP +S +P + G P + + Q +AD+K
Sbjct: 194 ASIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGPPTPPT--TPKTELQAGKADSK 250
>ZFIN|ZDB-GENE-001103-2 [details] [associations]
symbol:sox9b "SRY-box containing gene 9b"
species:7955 "Danio rerio" [GO:0048839 "inner ear development"
evidence=IGI;IMP] [GO:0043049 "otic placode formation"
evidence=IGI;IMP] [GO:0060041 "retina development in camera-type
eye" evidence=IMP] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0035118
"embryonic pectoral fin morphogenesis" evidence=IMP] [GO:0030318
"melanocyte differentiation" evidence=IMP] [GO:0030916 "otic
vesicle formation" evidence=IGI] [GO:0050935 "iridophore
differentiation" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-001103-2 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0060041 GO:GO:0051216
GO:GO:0031016 GO:GO:0030318 GO:GO:0035118 GO:GO:0043049
GO:GO:0050935 GeneTree:ENSGT00670000097649 InterPro:IPR022151
Pfam:PF12444 EMBL:CU855796 IPI:IPI00994467
Ensembl:ENSDART00000124464 ArrayExpress:F1QDZ3 Bgee:F1QDZ3
Uniprot:F1QDZ3
Length = 408
Score = 131 (51.2 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EKRPF++EA+RLR H K+HPDYKY+PRR+
Sbjct: 137 EKRPFVEEAERLRVQHKKDHPDYKYQPRRR 166
>FB|FBgn0024288 [details] [associations]
symbol:Sox100B "Sox100B" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008301 "DNA binding, bending"
evidence=ISS] [GO:0008584 "male gonad development"
evidence=IMP;IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0008584
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 EMBL:AJ251580
ProteinModelPortal:Q9VA16 SMR:Q9VA16 STRING:Q9VA16
FlyBase:FBgn0024288 InParanoid:Q9VA16 OrthoDB:EOG4Q83CZ Bgee:Q9VA16
Uniprot:Q9VA16
Length = 529
Score = 132 (51.5 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
+K+PF++ A++LR H +EHPDYKY+PRRK + +P+ S + G+P P +A
Sbjct: 122 DKKPFMEFAEKLRMTHKQEHPDYKYQPRRKK---ARVLPSQHSGDGGSPGPEMTLSATMG 178
Query: 62 FPLPPYFANHGG 73
P +N G
Sbjct: 179 SSGKPRSSNSNG 190
>MGI|MGI:98358 [details] [associations]
symbol:Sox10 "SRY-box containing gene 10" species:10090 "Mus
musculus" [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IDA] [GO:0000980
"RNA polymerase II distal enhancer sequence-specific DNA binding"
evidence=IDA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IDA]
[GO:0001701 "in utero embryonic development" evidence=IGI]
[GO:0001755 "neural crest cell migration" evidence=IMP] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0007422 "peripheral nervous system development" evidence=IGI]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0014015 "positive regulation of gliogenesis" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0030318
"melanocyte differentiation" evidence=IMP] [GO:0031315 "extrinsic
to mitochondrial outer membrane" evidence=IDA] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA;IMP] [GO:0048469 "cell maturation"
evidence=IGI;IMP] [GO:0048484 "enteric nervous system development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IGI;IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0048709 "oligodendrocyte differentiation" evidence=IMP]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IDA] InterPro:IPR009071 MGI:MGI:98358
Pfam:PF00505 GO:GO:0005634 GO:GO:0043066 GO:GO:0001755
GO:GO:0001701 GO:GO:0045944 GO:GO:0048863 GO:GO:0007422
GO:GO:0003682 GO:GO:0003705 GO:GO:0000980 GO:GO:0000978
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0048589 GO:GO:0090090 GO:GO:0030318 GO:GO:0048709
GO:GO:0031315 GO:GO:0048484 GO:GO:0002052 GO:GO:0048546
GO:GO:0048469 GO:GO:0014015 CTD:6663 eggNOG:NOG295709
GeneTree:ENSGT00670000097649 HOVERGEN:HBG002061 KO:K09270
OrthoDB:EOG41C6WH InterPro:IPR022151 Pfam:PF12444 OMA:YYGHSSQ
EMBL:AF017182 EMBL:AF047043 EMBL:U66141 EMBL:BC018551 EMBL:BC023356
EMBL:BC025171 EMBL:Z18959 EMBL:U70441 IPI:IPI00929823 PIR:S30242
RefSeq:NP_035567.1 UniGene:Mm.276739 ProteinModelPortal:Q04888
SMR:Q04888 STRING:Q04888 PhosphoSite:Q04888 PaxDb:Q04888
PRIDE:Q04888 Ensembl:ENSMUST00000040019 GeneID:20665 KEGG:mmu:20665
InParanoid:Q04888 ChiTaRS:SOX10 NextBio:299123 Bgee:Q04888
CleanEx:MM_SOX10 CleanEx:MM_SOX21 Genevestigator:Q04888
GermOnline:ENSMUSG00000033006 Uniprot:Q04888
Length = 466
Score = 131 (51.2 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---TPGQS-IPNNKSPNQGAPA 51
+KRPFI+EA+RLR H K+HPDYKY+PRR+ G++ P ++ GA A
Sbjct: 149 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGGEAEQGGAAA 202
>RGD|3735 [details] [associations]
symbol:Sox10 "SRY (sex determining region Y)-box 10" species:10116
"Rattus norvegicus" [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0000980 "RNA polymerase II distal enhancer sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0000981 "sequence-specific DNA binding
RNA polymerase II transcription factor activity" evidence=ISO]
[GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
[GO:0001755 "neural crest cell migration" evidence=IEA;ISO]
[GO:0002052 "positive regulation of neuroblast proliferation"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007422 "peripheral nervous system
development" evidence=IEA;ISO] [GO:0008134 "transcription factor
binding" evidence=IDA;IPI] [GO:0014015 "positive regulation of
gliogenesis" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
evidence=ISO] [GO:0030318 "melanocyte differentiation"
evidence=IEA;ISO] [GO:0031315 "extrinsic to mitochondrial outer
membrane" evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0048468 "cell development"
evidence=NAS] [GO:0048469 "cell maturation" evidence=IEA;ISO]
[GO:0048484 "enteric nervous system development" evidence=IEA;ISO]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA;ISO]
[GO:0048589 "developmental growth" evidence=IEA;ISO] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA;ISO] [GO:0048863 "stem
cell differentiation" evidence=IEP] [GO:0090090 "negative regulation
of canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
InterPro:IPR009071 Pfam:PF00505 RGD:3735 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0043066 GO:GO:0003677 GO:GO:0001755
GO:GO:0001701 GO:GO:0045944 GO:GO:0048863 GO:GO:0007422 GO:GO:0003682
GO:GO:0003705 GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589
GO:GO:0090090 GO:GO:0008134 GO:GO:0030318 GO:GO:0048709 GO:GO:0048468
GO:GO:0031315 GO:GO:0048484 GO:GO:0002052 GO:GO:0048546 GO:GO:0048469
GO:GO:0014015 CTD:6663 eggNOG:NOG295709 GeneTree:ENSGT00670000097649
HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270 OrthoDB:EOG41C6WH
InterPro:IPR022151 Pfam:PF12444 OMA:YYGHSSQ EMBL:AJ001029
EMBL:BC062067 IPI:IPI00195985 RefSeq:NP_062066.1 UniGene:Rn.10883
ProteinModelPortal:O55170 SMR:O55170 IntAct:O55170 MINT:MINT-3376332
STRING:O55170 Ensembl:ENSRNOT00000015283 GeneID:29361 KEGG:rno:29361
UCSC:RGD:3735 InParanoid:O55170 NextBio:608888 Genevestigator:O55170
GermOnline:ENSRNOG00000011305 Uniprot:O55170
Length = 466
Score = 131 (51.2 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK---TPGQS-IPNNKSPNQGAPA 51
+KRPFI+EA+RLR H K+HPDYKY+PRR+ G++ P ++ GA A
Sbjct: 149 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGGETDQGGAAA 202
>ZFIN|ZDB-GENE-040426-1274 [details] [associations]
symbol:sox4b "SRY-box containing gene 4b"
species:7955 "Danio rerio" [GO:0031018 "endocrine pancreas
development" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-040426-1274 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0031018 HOVERGEN:HBG005040
InterPro:IPR017386 PIRSF:PIRSF038098 HOGENOM:HOG000231874
EMBL:AY369082 IPI:IPI00510524 UniGene:Dr.151812
ProteinModelPortal:Q6UJB6 SMR:Q6UJB6 STRING:Q6UJB6
InParanoid:Q6UJB6 ArrayExpress:Q6UJB6 Uniprot:Q6UJB6
Length = 342
Score = 128 (50.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNK-SPNQGAPAPTSASNAFP 60
+K PFI EA+RLR HM ++PDYKYRPR+K K+ G S P+ K S ++ + SA
Sbjct: 100 DKIPFIREAERLRLKHMADYPDYKYRPRKKVKSSG-SKPSEKLSISKPSSKKRSAGKPHK 158
Query: 61 SFPLP 65
P P
Sbjct: 159 KEPGP 163
>ZFIN|ZDB-GENE-040109-4 [details] [associations]
symbol:sox7 "SRY-box containing gene 7" species:7955
"Danio rerio" [GO:0001570 "vasculogenesis" evidence=IGI]
[GO:0048793 "pronephros development" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-040109-4
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0001570 GO:GO:0048793 eggNOG:NOG242943 InterPro:IPR021934
Pfam:PF12067 PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270
HOGENOM:HOG000069999 HOVERGEN:HBG000517 CTD:83595 OrthoDB:EOG447FTC
OMA:SFECSAG EMBL:BX510941 EMBL:BC075872 EMBL:AY423014
IPI:IPI00504949 RefSeq:NP_001074219.1 UniGene:Dr.151971
UniGene:Dr.27174 SMR:Q6TEN5 STRING:Q6TEN5
Ensembl:ENSDART00000044224 Ensembl:ENSDART00000130271 GeneID:394203
KEGG:dre:394203 InParanoid:Q6TEN5 NextBio:20815136 Uniprot:Q6TEN5
Length = 390
Score = 123 (48.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 19/30 (63%), Positives = 28/30 (93%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
+KRP+++EA+RLR HM+++P+YKYRPRRK
Sbjct: 88 QKRPYVEEAERLRVQHMQDYPNYKYRPRRK 117
Score = 40 (19.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 34 TPGQSIPNNKSPNQGAPAPTSAS-NAFP-SFPLPPYFANHGGGSHPH 78
+PG ++P + PA +++S + +P P PP + H H
Sbjct: 167 SPGAALPGVRVFRD--PASSNSSFDTYPYGLPTPPEMSPLDAVDHEH 211
>MGI|MGI:98366 [details] [associations]
symbol:Sox4 "SRY-box containing gene 4" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISO;IDA]
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=ISO;IDA] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO;IDA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IDA] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0001666 "response to hypoxia"
evidence=ISO] [GO:0001841 "neural tube formation" evidence=IMP]
[GO:0002328 "pro-B cell differentiation" evidence=IMP] [GO:0003183
"mitral valve morphogenesis" evidence=IMP] [GO:0003211 "cardiac
ventricle formation" evidence=IMP] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IMP] [GO:0003289 "atrial septum
primum morphogenesis" evidence=IMP] [GO:0003357 "noradrenergic
neuron differentiation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=ISO] [GO:0007507
"heart development" evidence=IMP] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO;IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0014009 "glial
cell proliferation" evidence=IMP] [GO:0021510 "spinal cord
development" evidence=IMP] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IMP] [GO:0021782 "glial cell development"
evidence=IMP] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0030217 "T cell
differentiation" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0031397 "negative regulation of
protein ubiquitination" evidence=ISO] [GO:0031647 "regulation of
protein stability" evidence=ISO] [GO:0032024 "positive regulation
of insulin secretion" evidence=IMP] [GO:0035019 "somatic stem cell
maintenance" evidence=IDA] [GO:0035910 "ascending aorta
morphogenesis" evidence=IMP] [GO:0042593 "glucose homeostasis"
evidence=IMP] [GO:0042769 "DNA damage response, detection of DNA
damage" evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0045727 "positive regulation
of translation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046826 "negative regulation of
protein export from nucleus" evidence=ISO] [GO:0048485 "sympathetic
nervous system development" evidence=IMP] [GO:0050821 "protein
stabilization" evidence=ISO;IMP] [GO:0060070 "canonical Wnt
receptor signaling pathway" evidence=IMP] [GO:0060174 "limb bud
formation" evidence=IMP] [GO:0060412 "ventricular septum
morphogenesis" evidence=IMP] [GO:0060548 "negative regulation of
cell death" evidence=IMP] [GO:0060563 "neuroepithelial cell
differentiation" evidence=IMP] [GO:0060993 "kidney morphogenesis"
evidence=IMP] [GO:0071333 "cellular response to glucose stimulus"
evidence=IMP] [GO:0090263 "positive regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] [GO:2000761 "positive
regulation of N-terminal peptidyl-lysine acetylation" evidence=ISO]
InterPro:IPR009071 MGI:MGI:98366 Pfam:PF00505 GO:GO:0005739
GO:GO:0005634 GO:GO:0043066 GO:GO:0008285 GO:GO:0050821
GO:GO:0006977 GO:GO:0071333 GO:GO:0008284 GO:GO:0032024
GO:GO:0001077 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0043065 GO:GO:0021522 GO:GO:0014009
GO:GO:0001501 GO:GO:0003289 GO:GO:0003183 GO:GO:0035019
GO:GO:0060993 GO:GO:0031018 GO:GO:0045727 GO:GO:0090263
GO:GO:0001105 GO:GO:0048485 GO:GO:0060070 GO:GO:0031397
GO:GO:0060563 GO:GO:0046826 GO:GO:0001046 GO:GO:0030217
GO:GO:0001841 EMBL:CH466561 GO:GO:0060412 GO:GO:0060174
GO:GO:0042769 GO:GO:0002328 GO:GO:0003215 GO:GO:0021782
GO:GO:0003357 GO:GO:0035910 GO:GO:0003211 HOVERGEN:HBG005040
KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098 HOGENOM:HOG000231874
GeneTree:ENSGT00690000101789 CTD:6659 OMA:AGCSPDG ChiTaRS:SOX4
GO:GO:2000761 EMBL:X70298 EMBL:AL606511 EMBL:BC052736 EMBL:U70440
IPI:IPI00320363 PIR:S37303 RefSeq:NP_033264.2 UniGene:Mm.240627
UniGene:Mm.455819 PDB:3U2B PDBsum:3U2B ProteinModelPortal:Q06831
SMR:Q06831 IntAct:Q06831 STRING:Q06831 PhosphoSite:Q06831
PRIDE:Q06831 Ensembl:ENSMUST00000067230 GeneID:20677 KEGG:mmu:20677
InParanoid:Q5SW95 NextBio:299169 Bgee:Q06831 CleanEx:MM_SOX4
Genevestigator:Q06831 Uniprot:Q06831
Length = 440
Score = 127 (49.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 52/166 (31%), Positives = 68/166 (40%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQ---SIPNNKSPNQGAPAPTSASNA 58
+K PFI EA+RLR HM ++PDYKYRPR+K K+ S K +G S+ +A
Sbjct: 104 DKIPFIQEAERLRLKHMADYPDYKYRPRKKVKSGNAGAGSAATAKPGEKGDKVAGSSGHA 163
Query: 59 FPSFPLPPYFANHGGGSHPHPLDSLSAAYPPMNMPHYFGSPFDAMNFSKLVQGQTSQADT 118
S GG S P P S P GS + +KLV S+A
Sbjct: 164 GSSHA----GGGAGGSSKPAPKKSCG--------PKVAGSSVGKPH-AKLVPAGGSKAAA 210
Query: 119 KXXXXXXXXXXXXX-XXLYPSVT-SAQTKTFSTPPPSHLSALFQHP 162
+Y T SA T S+ P S L+ +HP
Sbjct: 211 SFSPEQAALLPLGEPTAVYKVRTPSAATPAASSSPSSALATPAKHP 256
>RGD|3759 [details] [associations]
symbol:Sry "sex determining region Y" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007530 "sex determination" evidence=ISO]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008301 "DNA
binding, bending" evidence=ISO] [GO:0008584 "male gonad development"
evidence=ISO] [GO:0010629 "negative regulation of gene expression"
evidence=ISO] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030238 "male sex determination" evidence=ISO;IEP]
[GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IDA] [GO:2000020 "positive regulation of male
gonad development" evidence=ISO] InterPro:IPR009071 Pfam:PF00505
RGD:3759 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0016607
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
GO:GO:0030238 HOVERGEN:HBG008712 InterPro:IPR027151
PANTHER:PTHR10270:SF84 EMBL:X89730 EMBL:AJ222688 EMBL:Z26907
IPI:IPI00551785 PIR:S58088 ProteinModelPortal:P36394 SMR:P36394
PRIDE:P36394 Genevestigator:P36394 Uniprot:P36394
Length = 121
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
EKRPF EA+RL+ +H +++P+YKY+P R+ K P +S
Sbjct: 50 EKRPFFQEAQRLKTLHREKYPNYKYQPHRRVKVPQRS 86
>UNIPROTKB|F5H3H1 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548 GO:GO:0030238
PANTHER:PTHR10270:SF48 HGNC:HGNC:11311 EMBL:AC006040
IPI:IPI01013243 ProteinModelPortal:F5H3H1 SMR:F5H3H1
Ensembl:ENST00000534739 ArrayExpress:F5H3H1 Bgee:F5H3H1
Uniprot:F5H3H1
Length = 165
Score = 118 (46.6 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EK PF EA++L+AMH +++P+YKYRPRRK K +P N S PA S
Sbjct: 105 EKWPFFQEAQKLQAMHREKYPNYKYRPRRKAKM----LPKNCSLLPADPASVLCS 155
>FB|FBgn0005612 [details] [associations]
symbol:Sox14 "Sox box protein 14" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;IMP;NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008301 "DNA binding, bending"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0016322 "neuron remodeling" evidence=IGI]
[GO:0048813 "dendrite morphogenesis" evidence=IGI] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0007552 "metamorphosis" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 EMBL:AE013599 GO:GO:0005634
GO:GO:0043565 GO:GO:0016322 GO:GO:0006357 GO:GO:0006351
GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0048813 GO:GO:0007552 eggNOG:NOG130659
GeneTree:ENSGT00690000101789 CTD:8403 EMBL:AJ252125 EMBL:X65667
PIR:S22935 RefSeq:NP_476894.1 RefSeq:NP_599117.1 UniGene:Dm.760
ProteinModelPortal:P40656 SMR:P40656 IntAct:P40656 MINT:MINT-791196
STRING:P40656 EnsemblMetazoa:FBtr0072157 EnsemblMetazoa:FBtr0072158
GeneID:37822 KEGG:dme:Dmel_CG3090 FlyBase:FBgn0005612
InParanoid:P40656 OMA:NDANLHS OrthoDB:EOG4ZGMVV PhylomeDB:P40656
GenomeRNAi:37822 NextBio:805561 Bgee:P40656 GermOnline:CG3090
Uniprot:P40656
Length = 669
Score = 123 (48.4 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKP-KTPGQSIPNNKSPNQGAPAPTSASN 57
+K+P+I EA++LR +HM E+P+YKYRP++K ++PG PN + A T+ +N
Sbjct: 232 DKQPYIIEAEKLRKLHMIEYPNYKYRPQKKQTRSPGSLKPNQDADGCEARNDTTNNN 288
Score = 41 (19.5 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 79 PLDSLSAAYPPMN--MPHYFGSPFDA-MNFSKLVQGQTSQAD 117
PL+S +N +P + G D+ + S L Q Q +Q+D
Sbjct: 389 PLESRENLSEVVNRFLPLFLGGNEDSQLGVSSLTQSQHNQSD 430
>UNIPROTKB|O42601 [details] [associations]
symbol:sox17b.1 "Transcription factor Sox-17-beta.1"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0007494 "midgut development"
evidence=IMP] [GO:0008013 "beta-catenin binding" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0016055
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 GO:GO:0007494
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0008013 GO:GO:0007492 GO:GO:0030178
GO:GO:0007369 HSSP:P48431 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 EMBL:AJ001742 EMBL:BC070615 RefSeq:NP_001081633.1
UniGene:Xl.44 ProteinModelPortal:O42601 SMR:O42601 GeneID:397967
KEGG:xla:397967 CTD:397967 Xenbase:XB-GENE-6252148 Uniprot:O42601
Length = 373
Score = 125 (49.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 20/29 (68%), Positives = 27/29 (93%)
Query: 3 KRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
KRPF++EA+RLR H++++PDYKYRPRRK
Sbjct: 104 KRPFVEEAERLRVQHIQDYPDYKYRPRRK 132
>MGI|MGI:98360 [details] [associations]
symbol:Sox12 "SRY-box containing gene 12" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0021510 "spinal cord development"
evidence=IDA] [GO:0032993 "protein-DNA complex" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0065004 "protein-DNA
complex assembly" evidence=IDA] InterPro:IPR009071 MGI:MGI:98360
Pfam:PF00505 GO:GO:0005634 GO:GO:0001077 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021510
GO:GO:0000976 GO:GO:0001105 GO:GO:0045165 GO:GO:0032993
GO:GO:0065004 EMBL:AL928568 KO:K09268 InterPro:IPR017386
PIRSF:PIRSF038098 HOGENOM:HOG000231874 GeneTree:ENSGT00690000101789
CTD:6666 eggNOG:NOG290369 HOVERGEN:HBG094895 OMA:VQQRGAR
OrthoDB:EOG41VK47 EMBL:BC067019 EMBL:Z18961 EMBL:U70442
IPI:IPI00111161 PIR:S30240 RefSeq:NP_035568.1 UniGene:Mm.28424
ProteinModelPortal:Q04890 SMR:Q04890 STRING:Q04890
PhosphoSite:Q04890 PRIDE:Q04890 Ensembl:ENSMUST00000063332
GeneID:20667 KEGG:mmu:20667 UCSC:uc008nfi.1 InParanoid:A2AS82
ChiTaRS:SOX12 NextBio:299133 Bgee:Q04890 CleanEx:MM_SOX12
Genevestigator:Q04890 GermOnline:ENSMUSG00000051817 Uniprot:Q04890
Length = 314
Score = 124 (48.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK-TPGQSIPNNKSPNQG 48
EK PF+ EA+RLR HM ++PDYKYRPR+K K P ++ P + P G
Sbjct: 85 EKIPFVREAERLRLKHMADYPDYKYRPRKKSKGAPAKARP--RPPGGG 130
>RGD|1586313 [details] [associations]
symbol:Sox12 "SRY (sex determining region Y)-box 12"
species:10116 "Rattus norvegicus" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISO;ISS]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO;ISS]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO;ISS] [GO:0021510 "spinal cord development"
evidence=ISO;ISS] [GO:0032993 "protein-DNA complex"
evidence=IEA;ISO] [GO:0045165 "cell fate commitment"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0065004
"protein-DNA complex assembly" evidence=IEA;ISO] InterPro:IPR009071
Pfam:PF00505 RGD:1586313 GO:GO:0001077 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021510
GO:GO:0000976 GO:GO:0001105 GO:GO:0045165 GO:GO:0032993
GO:GO:0065004 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
GeneTree:ENSGT00690000101789 CTD:6666 OrthoDB:EOG41VK47
IPI:IPI00368815 RefSeq:NP_001162121.1 UniGene:Rn.224641
PRIDE:D3ZZ13 Ensembl:ENSRNOT00000009852 GeneID:689988
KEGG:rno:689988 UCSC:RGD:1586313 NextBio:739931 Uniprot:D3ZZ13
Length = 314
Score = 124 (48.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK-TPGQSIPNNKSPNQG 48
EK PF+ EA+RLR HM ++PDYKYRPR+K K P ++ P + P G
Sbjct: 85 EKIPFVREAERLRLKHMADYPDYKYRPRKKSKGAPAKARP--RPPGGG 130
>UNIPROTKB|E2RH58 [details] [associations]
symbol:SOX12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISS] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISS] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0021510 "spinal cord
development" evidence=ISS] [GO:0065004 "protein-DNA complex
assembly" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0001077 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021510
GO:GO:0000976 GO:GO:0001105 GO:GO:0045165 GO:GO:0032993
GO:GO:0065004 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
GeneTree:ENSGT00690000101789 CTD:6666 OMA:VQQRGAR EMBL:AAEX03013862
RefSeq:XP_542944.2 Ensembl:ENSCAFT00000011182 GeneID:485820
KEGG:cfa:485820 NextBio:20859729 Uniprot:E2RH58
Length = 321
Score = 124 (48.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK-TPGQSIPNNKSPNQG 48
EK PF+ EA+RLR HM ++PDYKYRPR+K K P ++ P + P G
Sbjct: 85 EKIPFVREAERLRLKHMADYPDYKYRPRKKSKGAPAKARP--RPPGGG 130
>UNIPROTKB|Q9XT60 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9615
"Canis lupus familiaris" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005737 GO:GO:0030154 GO:GO:0003677
GO:GO:0016607 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
GO:GO:0030238 HOVERGEN:HBG008712 PANTHER:PTHR10270:SF48
EMBL:AF107021 ProteinModelPortal:Q9XT60 SMR:Q9XT60 Uniprot:Q9XT60
Length = 220
Score = 121 (47.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EK PF +EA+RL+AMH +++PDYKYRPRRK
Sbjct: 98 EKWPFFEEAQRLQAMHREKYPDYKYRPRRK 127
>UNIPROTKB|O15370 [details] [associations]
symbol:SOX12 "Transcription factor SOX-12" species:9606
"Homo sapiens" [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0065004 "protein-DNA complex assembly" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0045165 "cell fate commitment" evidence=IEP]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0021510 "spinal cord development" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISS]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0001077
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0021510 GO:GO:0000976 GO:GO:0001105 GO:GO:0045165
GO:GO:0032993 EMBL:AL034548 GO:GO:0065004 KO:K09268
InterPro:IPR017386 PIRSF:PIRSF038098 HOGENOM:HOG000231874
EMBL:U35612 EMBL:BC067361 IPI:IPI00006180 RefSeq:NP_008874.2
UniGene:Hs.43627 UniGene:Hs.712815 ProteinModelPortal:O15370
SMR:O15370 IntAct:O15370 STRING:O15370 PhosphoSite:O15370
PaxDb:O15370 PRIDE:O15370 Ensembl:ENST00000342665
Ensembl:ENST00000544632 GeneID:6666 KEGG:hsa:6666 UCSC:uc002wdh.3
CTD:6666 GeneCards:GC20P000306 HGNC:HGNC:11198 MIM:601947
neXtProt:NX_O15370 PharmGKB:PA36035 eggNOG:NOG290369
HOVERGEN:HBG094895 InParanoid:O15370 OMA:VQQRGAR OrthoDB:EOG41VK47
PhylomeDB:O15370 GenomeRNAi:6666 NextBio:25991 Bgee:O15370
CleanEx:HS_SOX12 Genevestigator:O15370 Uniprot:O15370
Length = 315
Score = 123 (48.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPK-TPGQSIP 40
EK PF+ EA+RLR HM ++PDYKYRPR+K K P ++ P
Sbjct: 85 EKIPFVREAERLRLKHMADYPDYKYRPRKKSKGAPAKARP 124
>UNIPROTKB|G3MYL8 [details] [associations]
symbol:G3MYL8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000761 "positive regulation of N-terminal
peptidyl-lysine acetylation" evidence=IEA] [GO:0090263 "positive
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071333 "cellular response to glucose stimulus"
evidence=IEA] [GO:0060993 "kidney morphogenesis" evidence=IEA]
[GO:0060563 "neuroepithelial cell differentiation" evidence=IEA]
[GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
[GO:0060174 "limb bud formation" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0048485
"sympathetic nervous system development" evidence=IEA] [GO:0046826
"negative regulation of protein export from nucleus" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0042769 "DNA damage response, detection
of DNA damage" evidence=IEA] [GO:0035910 "ascending aorta
morphogenesis" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0032024 "positive regulation of
insulin secretion" evidence=IEA] [GO:0031397 "negative regulation
of protein ubiquitination" evidence=IEA] [GO:0031018 "endocrine
pancreas development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0021782 "glial cell development"
evidence=IEA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEA] [GO:0014009 "glial cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0006977 "DNA damage
response, signal transduction by p53 class mediator resulting in
cell cycle arrest" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003357
"noradrenergic neuron differentiation" evidence=IEA] [GO:0003289
"atrial septum primum morphogenesis" evidence=IEA] [GO:0003215
"cardiac right ventricle morphogenesis" evidence=IEA] [GO:0003211
"cardiac ventricle formation" evidence=IEA] [GO:0003183 "mitral
valve morphogenesis" evidence=IEA] [GO:0002328 "pro-B cell
differentiation" evidence=IEA] [GO:0001841 "neural tube formation"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005739 GO:GO:0005634 GO:GO:0043066
GO:GO:0008285 GO:GO:0050821 GO:GO:0006977 GO:GO:0071333
GO:GO:0008284 GO:GO:0045944 GO:GO:0032024 GO:GO:0001077
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0043065 GO:GO:0021522 GO:GO:0014009 GO:GO:0001501
GO:GO:0003289 GO:GO:0003183 GO:GO:0035019 GO:GO:0060993
GO:GO:0031018 GO:GO:0045727 GO:GO:0090263 GO:GO:0001105
GO:GO:0048485 GO:GO:0060070 GO:GO:0031397 GO:GO:0060563
GO:GO:0046826 GO:GO:0001046 GO:GO:0030217 GO:GO:0001841
GO:GO:0060412 GO:GO:0060174 GO:GO:0042769 GO:GO:0002328
GO:GO:0003215 GO:GO:0021782 GO:GO:0003357 GO:GO:0035910
GO:GO:0003211 InterPro:IPR017386 PIRSF:PIRSF038098
GeneTree:ENSGT00690000101789 OMA:AGCSPDG GO:GO:2000761
EMBL:DAAA02055577 EMBL:DAAA02055578 Ensembl:ENSBTAT00000064038
Uniprot:G3MYL8
Length = 378
Score = 123 (48.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
+K PFI EA+RLR HM ++PDYKYRPR+K K+ G + N+ S A P +
Sbjct: 104 DKIPFIREAERLRLKHMADYPDYKYRPRKKVKS-GNA--NSGSAAAAASKPGEKGDKVGG 160
Query: 62 FPLPPYFANHGGGSH 76
+ GGGSH
Sbjct: 161 ---SGHGGGGGGGSH 172
>UNIPROTKB|F5H6J8 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR009071
InterPro:IPR017253 PIRSF:PIRSF037653 Pfam:PF00505 GO:GO:0043231
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548 GO:GO:0030238
PANTHER:PTHR10270:SF48 HGNC:HGNC:11311 EMBL:AC006040
IPI:IPI01012788 ProteinModelPortal:F5H6J8 SMR:F5H6J8
Ensembl:ENST00000525526 ArrayExpress:F5H6J8 Bgee:F5H6J8
Uniprot:F5H6J8
Length = 197
Score = 118 (46.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EK PF EA++L+AMH +++P+YKYRPRRK K +P N S PA S
Sbjct: 105 EKWPFFQEAQKLQAMHREKYPNYKYRPRRKAKM----LPKNCSLLPADPASVLCS 155
>UNIPROTKB|Q05066 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9606
"Homo sapiens" [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IDA;NAS] [GO:0030238 "male sex determination"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:2000020 "positive
regulation of male gonad development" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR009071 InterPro:IPR017253
PIRSF:PIRSF037653 Pfam:PF00505 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0030154 GO:GO:0003677 GO:GO:0016607
GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0007548 Pathway_Interaction_DB:ar_tf_pathway
Orphanet:242 GO:GO:2000020 GO:GO:0030238 Orphanet:251510 PDB:2GZK
PDBsum:2GZK eggNOG:NOG130659 CTD:6736 HOVERGEN:HBG008712 KO:K09266
OMA:QSYASAM PANTHER:PTHR10270:SF48 EMBL:X53772 EMBL:L10101
EMBL:L10102 EMBL:L08063 EMBL:X96421 EMBL:S53156 EMBL:S56543
EMBL:BC074923 EMBL:BC074924 IPI:IPI00011568 PIR:A47533
RefSeq:NP_003131.1 UniGene:Hs.1992 PDB:1HRY PDB:1HRZ PDB:1J46
PDB:1J47 PDBsum:1HRY PDBsum:1HRZ PDBsum:1J46 PDBsum:1J47
ProteinModelPortal:Q05066 SMR:Q05066 IntAct:Q05066
MINT:MINT-1367278 STRING:Q05066 PhosphoSite:Q05066 DMDM:548983
PRIDE:Q05066 DNASU:6736 Ensembl:ENST00000383070 GeneID:6736
KEGG:hsa:6736 UCSC:uc004fqg.1 GeneCards:GC0YM002698 HGNC:HGNC:11311
HPA:HPA003959 MIM:400044 MIM:400045 MIM:480000 neXtProt:NX_Q05066
Orphanet:1772 Orphanet:393 Orphanet:983 PharmGKB:PA36135
HOGENOM:HOG000008601 InParanoid:Q05066 OrthoDB:EOG49079Z
PhylomeDB:Q05066 EvolutionaryTrace:Q05066 GenomeRNAi:6736
NextBio:26276 ArrayExpress:Q05066 Bgee:Q05066 CleanEx:HS_SRY
Genevestigator:Q05066 GermOnline:ENSG00000184895 Uniprot:Q05066
Length = 204
Score = 118 (46.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSAS 56
EK PF EA++L+AMH +++P+YKYRPRRK K +P N S PA S
Sbjct: 105 EKWPFFQEAQKLQAMHREKYPNYKYRPRRKAKM----LPKNCSLLPADPASVLCS 155
>UNIPROTKB|I3LMN8 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9823
"Sus scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
GeneTree:ENSGT00690000101940 GO:GO:0030238 PANTHER:PTHR10270:SF48
EMBL:FQ311950 Ensembl:ENSSSCT00000030781 Uniprot:I3LMN8
Length = 208
Score = 118 (46.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIP 40
EKRPF +EA+RL+A+H ++P YKYRPRRK + +P
Sbjct: 107 EKRPFFEEAQRLQAVHRDKYPGYKYRPRRKGERAQNLLP 145
>UNIPROTKB|P36393 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548 GO:GO:0030238
CTD:6736 HOVERGEN:HBG008712 PANTHER:PTHR10270:SF48 EMBL:U49860
EMBL:Z23070 EMBL:S79625 EMBL:Z26909 PIR:I47151 RefSeq:NP_999617.2
ProteinModelPortal:P36393 SMR:P36393 GeneID:407740 KEGG:ssc:407740
Uniprot:P36393
Length = 208
Score = 118 (46.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIP 40
EKRPF +EA+RL+A+H ++P YKYRPRRK + +P
Sbjct: 107 EKRPFFEEAQRLQAVHRDKYPGYKYRPRRKGERAQNLLP 145
>UNIPROTKB|Q5I921 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9823
"Sus scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
GeneTree:ENSGT00690000101940 GO:GO:0030238 CTD:6736
HOVERGEN:HBG008712 KO:K09266 OMA:QSYASAM PANTHER:PTHR10270:SF48
EMBL:FP565153 EMBL:AY842532 EMBL:AY842533 EMBL:AY842535
EMBL:GU991615 EMBL:GU143100 EMBL:GU143101 EMBL:GU143102
EMBL:GU143104 EMBL:GU143105 EMBL:GU143106 EMBL:GU143107
EMBL:GU143108 EMBL:GU143123 EMBL:GU143124 EMBL:GU143127
EMBL:GU143128 EMBL:GU143129 EMBL:GU143130 EMBL:GU143131
EMBL:GU143132 EMBL:GU143136 EMBL:GU143137 EMBL:GU143138
EMBL:GU143139 EMBL:GU143143 EMBL:GU143147 EMBL:GU143148
EMBL:GU143152 EMBL:GU143153 EMBL:GU143154 EMBL:GU143155
EMBL:GU143156 EMBL:GU143157 EMBL:GU143158 EMBL:GU143159
EMBL:GU143160 EMBL:GU143161 EMBL:GU143164 EMBL:GU143165
EMBL:GU143168 EMBL:GU143169 EMBL:GU143172 EMBL:GU143173
EMBL:GU143178 EMBL:GU143186 EMBL:GU143187 EMBL:GU143188
EMBL:GU143189 EMBL:GU143190 EMBL:GU143191 EMBL:GU143196
EMBL:GU143198 EMBL:GU143199 EMBL:GU143200 EMBL:GU143202
EMBL:GU143204 EMBL:GU143205 EMBL:GU143206 EMBL:GU143207
EMBL:GU143210 EMBL:GU143211 EMBL:GU143212 EMBL:GU143213
EMBL:GU143220 EMBL:GU143221 EMBL:GU143223 EMBL:GU143224
EMBL:GU143229 EMBL:GU143230 EMBL:GU143232 EMBL:GU143233
EMBL:GU143234 EMBL:GU143235 EMBL:GU143236 EMBL:GU143237
EMBL:GU143241 EMBL:GU143242 EMBL:GU143243 EMBL:GU143244
EMBL:GU143246 EMBL:GU143249 RefSeq:XP_003360585.1 SMR:Q5I921
Ensembl:ENSSSCT00000027478 GeneID:100625818 KEGG:ssc:100625818
Uniprot:Q5I921
Length = 236
Score = 118 (46.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIP 40
EKRPF +EA+RL+A+H ++P YKYRPRRK + +P
Sbjct: 107 EKRPFFEEAQRLQAVHRDKYPGYKYRPRRKGERAQNLLP 145
>UNIPROTKB|Q8AXQ4 [details] [associations]
symbol:sox12 "Transcription factor Sox-12" species:8355
"Xenopus laevis" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HSSP:P48431 KO:K09268 CTD:6666 EMBL:AB086020 EMBL:BC169671
EMBL:BC169697 RefSeq:NP_001079045.1 UniGene:Xl.21610
ProteinModelPortal:Q8AXQ4 GeneID:373574 KEGG:xla:373574
Xenbase:XB-GENE-864958 Uniprot:Q8AXQ4
Length = 244
Score = 118 (46.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS----IPNNKSPNQGAPAP 52
+K P++ EA+RLR HM ++P+YKYRPRR+ +T +P + + Q P+P
Sbjct: 76 DKIPYVREAERLRLKHMADYPNYKYRPRRRSRTQESKTRARLPRSTATCQSVPSP 130
>RGD|1309488 [details] [associations]
symbol:Sox4 "SRY (sex determining region Y)-box 4" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISO] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=ISO]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001666 "response to hypoxia" evidence=IDA]
[GO:0001841 "neural tube formation" evidence=ISO] [GO:0002328
"pro-B cell differentiation" evidence=ISO] [GO:0003183 "mitral
valve morphogenesis" evidence=ISO] [GO:0003211 "cardiac ventricle
formation" evidence=ISO] [GO:0003215 "cardiac right ventricle
morphogenesis" evidence=ISO] [GO:0003289 "atrial septum primum
morphogenesis" evidence=ISO] [GO:0003357 "noradrenergic neuron
differentiation" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=ISO] [GO:0007507 "heart
development" evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISO] [GO:0014009 "glial cell
proliferation" evidence=ISO] [GO:0021510 "spinal cord development"
evidence=ISO] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=ISO] [GO:0021782 "glial cell development"
evidence=ISO] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0030217 "T cell
differentiation" evidence=ISO] [GO:0031018 "endocrine pancreas
development" evidence=ISO] [GO:0031397 "negative regulation of
protein ubiquitination" evidence=ISO] [GO:0031647 "regulation of
protein stability" evidence=ISO] [GO:0032024 "positive regulation
of insulin secretion" evidence=ISO] [GO:0035019 "somatic stem cell
maintenance" evidence=ISO] [GO:0035910 "ascending aorta
morphogenesis" evidence=ISO] [GO:0042593 "glucose homeostasis"
evidence=ISO] [GO:0042769 "DNA damage response, detection of DNA
damage" evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0045727 "positive regulation
of translation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046826 "negative regulation of protein export
from nucleus" evidence=ISO] [GO:0048485 "sympathetic nervous system
development" evidence=ISO] [GO:0050821 "protein stabilization"
evidence=ISO] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=ISO] [GO:0060174 "limb bud formation"
evidence=ISO] [GO:0060412 "ventricular septum morphogenesis"
evidence=ISO] [GO:0060548 "negative regulation of cell death"
evidence=ISO] [GO:0060563 "neuroepithelial cell differentiation"
evidence=ISO] [GO:0060993 "kidney morphogenesis" evidence=ISO]
[GO:0071333 "cellular response to glucose stimulus" evidence=ISO]
[GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=ISO] [GO:2000761 "positive regulation
of N-terminal peptidyl-lysine acetylation" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] NCBI:NP_001258134
REFSEQ:NM_001271205
Length = 440
Score = 119 (46.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKT 34
+K PFI EA+RLR HM ++PDYKYRPR+K K+
Sbjct: 104 DKIPFIQEAERLRLKHMADYPDYKYRPRKKVKS 136
>ZFIN|ZDB-GENE-011026-1 [details] [associations]
symbol:sox32 "SRY-box containing gene 32"
species:7955 "Danio rerio" [GO:0001706 "endoderm formation"
evidence=IDA;IMP] [GO:0003007 "heart morphogenesis" evidence=IMP]
[GO:0007498 "mesoderm development" evidence=IDA] [GO:0001885
"endothelial cell development" evidence=IMP] [GO:0035050 "embryonic
heart tube development" evidence=IMP] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IGI;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IGI;IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0007492
"endoderm development" evidence=IMP] [GO:0007493 "endodermal cell
fate determination" evidence=IMP] [GO:0042074 "cell migration
involved in gastrulation" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IMP] [GO:0061035 "regulation of cartilage
development" evidence=IGI;IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-011026-1 GO:GO:0005634 GO:GO:0045893 GO:GO:0007498
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007368 GO:GO:0042074
GO:GO:0001885 GO:GO:0035050 GO:GO:0007493 GO:GO:0061035 HSSP:P48432
GO:GO:0003262 EMBL:BC097087 EMBL:AF362749 IPI:IPI00494054
RefSeq:NP_571926.1 UniGene:Dr.133216 SMR:Q90Z46 STRING:Q90Z46
GeneID:116990 KEGG:dre:116990 CTD:116990 HOVERGEN:HBG098276
InParanoid:Q90Z46 NextBio:20796959 Uniprot:Q90Z46
Length = 307
Score = 117 (46.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 34/91 (37%), Positives = 47/91 (51%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS-IPNNK---SPN---------QG 48
+KRP++ EA+RLR H ++P+YKYRPRR+ S +P+++ SPN QG
Sbjct: 115 DKRPYMQEAERLRIQHTIDYPNYKYRPRRRKCNKRSSKMPSSENVSSPNATFDLSYMFQG 174
Query: 49 APAPTSASNAFPSFPLPPY---FANHGGGSH 76
AP N S+ LP F NH H
Sbjct: 175 Q-APQRPYNQINSYRLPHNGFSFENHSSSYH 204
>UNIPROTKB|F1RUF9 [details] [associations]
symbol:SOX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060174 "limb bud formation" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0002328 "pro-B cell differentiation" evidence=ISS] [GO:0060563
"neuroepithelial cell differentiation" evidence=ISS] [GO:0021522
"spinal cord motor neuron differentiation" evidence=ISS]
[GO:0014009 "glial cell proliferation" evidence=ISS] [GO:0003357
"noradrenergic neuron differentiation" evidence=ISS] [GO:0001841
"neural tube formation" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0046826 "negative regulation of protein export
from nucleus" evidence=ISS] [GO:0031647 "regulation of protein
stability" evidence=ISS] [GO:2000761 "positive regulation of
N-terminal peptidyl-lysine acetylation" evidence=ISS] [GO:0006977
"DNA damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0007507 "heart development" evidence=ISS] [GO:0030217 "T cell
differentiation" evidence=ISS] [GO:0090263 "positive regulation of
canonical Wnt receptor signaling pathway" evidence=ISS] [GO:0042593
"glucose homeostasis" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060548 "negative regulation of cell
death" evidence=ISS] [GO:0021782 "glial cell development"
evidence=ISS] [GO:0021510 "spinal cord development" evidence=ISS]
[GO:0003211 "cardiac ventricle formation" evidence=ISS] [GO:0001501
"skeletal system development" evidence=ISS] [GO:0045727 "positive
regulation of translation" evidence=ISS] [GO:0042769 "DNA damage
response, detection of DNA damage" evidence=ISS] [GO:0031397
"negative regulation of protein ubiquitination" evidence=ISS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISS] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISS] [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISS] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=ISS] [GO:0048485
"sympathetic nervous system development" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=ISS] [GO:0050821 "protein stabilization"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0030177 "positive regulation
of Wnt receptor signaling pathway" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0071333 "cellular response to glucose
stimulus" evidence=ISS] [GO:0032024 "positive regulation of insulin
secretion" evidence=ISS] [GO:0060993 "kidney morphogenesis"
evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA] [GO:0035910 "ascending aorta morphogenesis"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0003289 "atrial septum primum morphogenesis"
evidence=IEA] [GO:0003215 "cardiac right ventricle morphogenesis"
evidence=IEA] [GO:0003183 "mitral valve morphogenesis"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005739
GO:GO:0005634 GO:GO:0043066 GO:GO:0008285 GO:GO:0050821
GO:GO:0006977 GO:GO:0071333 GO:GO:0008284 GO:GO:0032024
GO:GO:0001077 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0043065 GO:GO:0021522 GO:GO:0014009
GO:GO:0001501 GO:GO:0003289 GO:GO:0003183 GO:GO:0035019
GO:GO:0060993 GO:GO:0031018 GO:GO:0045727 GO:GO:0090263
GO:GO:0001105 GO:GO:0048485 GO:GO:0060070 GO:GO:0031397
GO:GO:0060563 GO:GO:0046826 GO:GO:0001046 GO:GO:0030217
GO:GO:0001841 GO:GO:0060412 GO:GO:0060174 GO:GO:0042769
GO:GO:0002328 GO:GO:0003215 GO:GO:0021782 GO:GO:0003357
GO:GO:0035910 GO:GO:0003211 KO:K09268 InterPro:IPR017386
PIRSF:PIRSF038098 GeneTree:ENSGT00690000101789 OMA:AGCSPDG
GO:GO:2000761 EMBL:CT757489 RefSeq:XP_003128248.1
Ensembl:ENSSSCT00000001176 GeneID:100512542 KEGG:ssc:100512542
Uniprot:F1RUF9
Length = 477
Score = 119 (46.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAP 52
+K PFI EA+RLR HM ++PDYKYRPR+K K+ G + N+ S + P
Sbjct: 104 DKIPFIREAERLRLKHMADYPDYKYRPRKKVKS-GNA--NSSSSTAASSKP 151
>UNIPROTKB|Q06945 [details] [associations]
symbol:SOX4 "Transcription factor SOX-4" species:9606 "Homo
sapiens" [GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0032024 "positive regulation of insulin secretion"
evidence=ISS] [GO:0071333 "cellular response to glucose stimulus"
evidence=ISS] [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA;IMP]
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=IMP] [GO:0042593 "glucose homeostasis" evidence=ISS]
[GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=ISS] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0042769 "DNA damage response,
detection of DNA damage" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0001841 "neural tube formation" evidence=ISS] [GO:0003357
"noradrenergic neuron differentiation" evidence=ISS] [GO:0014009
"glial cell proliferation" evidence=ISS] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=ISS] [GO:0060174 "limb bud
formation" evidence=ISS] [GO:0060563 "neuroepithelial cell
differentiation" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0048485 "sympathetic nervous system development" evidence=ISS]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=ISS] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISS] [GO:0031397 "negative
regulation of protein ubiquitination" evidence=IMP] [GO:0046826
"negative regulation of protein export from nucleus" evidence=IMP]
[GO:2000761 "positive regulation of N-terminal peptidyl-lysine
acetylation" evidence=IDA] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=IMP] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0031647 "regulation of protein
stability" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0001501 "skeletal system development" evidence=ISS] [GO:0003211
"cardiac ventricle formation" evidence=ISS] [GO:0021510 "spinal
cord development" evidence=ISS] [GO:0021782 "glial cell
development" evidence=ISS] [GO:0060548 "negative regulation of cell
death" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007507 "heart development" evidence=ISS] [GO:0030217 "T cell
differentiation" evidence=ISS] [GO:0002328 "pro-B cell
differentiation" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0030177 "positive regulation
of Wnt receptor signaling pathway" evidence=ISS] [GO:0003289
"atrial septum primum morphogenesis" evidence=ISS] [GO:0003183
"mitral valve morphogenesis" evidence=ISS] [GO:0060412 "ventricular
septum morphogenesis" evidence=ISS] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=ISS] [GO:0060993 "kidney
morphogenesis" evidence=ISS] [GO:0035910 "ascending aorta
morphogenesis" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005739 GO:GO:0005634 GO:GO:0043066
GO:GO:0008285 GO:GO:0050821 GO:GO:0006977 GO:GO:0071333
GO:GO:0008284 GO:GO:0032024 GO:GO:0001077 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0043065
GO:GO:0021522 GO:GO:0014009 GO:GO:0001501 GO:GO:0003289
GO:GO:0003183 GO:GO:0035019 GO:GO:0060993 GO:GO:0031018
GO:GO:0045727 GO:GO:0090263 GO:GO:0001105 GO:GO:0048485
GO:GO:0060070 GO:GO:0031397 GO:GO:0060563 GO:GO:0046826
GO:GO:0001046 GO:GO:0030217 GO:GO:0001841 GO:GO:0060412
GO:GO:0060174 GO:GO:0042769 GO:GO:0002328 GO:GO:0003215
GO:GO:0021782 GO:GO:0003357 GO:GO:0035910 GO:GO:0003211
HOVERGEN:HBG005040 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
eggNOG:NOG130659 HOGENOM:HOG000231874 OrthoDB:EOG41VK47 EMBL:X70683
EMBL:AL136179 EMBL:BC072668 EMBL:X65661 IPI:IPI00001617 PIR:I38240
RefSeq:NP_003098.1 UniGene:Hs.643910 ProteinModelPortal:Q06945
SMR:Q06945 DIP:DIP-58650N STRING:Q06945 PhosphoSite:Q06945
DMDM:548952 PaxDb:Q06945 PRIDE:Q06945 DNASU:6659
Ensembl:ENST00000244745 Ensembl:ENST00000543472 GeneID:6659
KEGG:hsa:6659 UCSC:uc003ndi.3 CTD:6659 GeneCards:GC06P021593
HGNC:HGNC:11200 HPA:HPA029901 MIM:184430 neXtProt:NX_Q06945
PharmGKB:PA36037 InParanoid:Q06945 OMA:AGCSPDG ChiTaRS:SOX4
GenomeRNAi:6659 NextBio:25959 Bgee:Q06945 CleanEx:HS_SOX4
Genevestigator:Q06945 GermOnline:ENSG00000124766 GO:GO:2000761
Uniprot:Q06945
Length = 474
Score = 118 (46.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 29/74 (39%), Positives = 40/74 (54%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQSIPNNKSPNQGAPAPTSASNAFPS 61
+K PFI EA+RLR HM ++PDYKYRPR+K K+ G + N+ S + P +
Sbjct: 104 DKIPFIREAERLRLKHMADYPDYKYRPRKKVKS-GNA--NSSSSAAASSKPGEKGDKVGG 160
Query: 62 FPLPPYFANHGGGS 75
+ GGGS
Sbjct: 161 SGGGGHGGGGGGGS 174
>UNIPROTKB|Q86G49 [details] [associations]
symbol:egl-13 "Protein EGL-13, isoform b" species:6239
"Caenorhabditis elegans" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0001708 GO:GO:0018991 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0040035 GO:GO:0030163 GO:GO:0009653
GO:GO:0040025 GO:GO:0045026 GeneTree:ENSGT00690000101789
EMBL:FO081738 HSSP:P35710 UCSC:T22B7.1c.2 HOGENOM:HOG000020384
NextBio:911168 ProteinModelPortal:Q86G49 SMR:Q86G49 STRING:Q86G49
EnsemblMetazoa:T22B7.1b.1 EnsemblMetazoa:T22B7.1b.2
WormBase:T22B7.1b ArrayExpress:Q86G49 Uniprot:Q86G49
Length = 316
Score = 108 (43.1 bits), Expect = 0.00036, P = 0.00036
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EK+P+ +E RL +HM++HPDY+YRPR K
Sbjct: 220 EKQPYYEEQSRLSKLHMEQHPDYRYRPRPK 249
>UNIPROTKB|H2L0M3 [details] [associations]
symbol:egl-13 "Protein EGL-13, isoform d" species:6239
"Caenorhabditis elegans" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0001708 GO:GO:0018991 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0040035 GO:GO:0030163 GO:GO:0009653
GO:GO:0040025 GO:GO:0045026 GeneTree:ENSGT00690000101789
EMBL:FO081738 ProteinModelPortal:H2L0M3 SMR:H2L0M3
EnsemblMetazoa:T22B7.1d WormBase:T22B7.1d Uniprot:H2L0M3
Length = 319
Score = 108 (43.1 bits), Expect = 0.00037, P = 0.00037
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EK+P+ +E RL +HM++HPDY+YRPR K
Sbjct: 223 EKQPYYEEQSRLSKLHMEQHPDYRYRPRPK 252
>MGI|MGI:98660 [details] [associations]
symbol:Sry "sex determining region of Chr Y" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI] [GO:0003677 "DNA
binding" evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007530 "sex determination" evidence=IGI]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0008584 "male gonad
development" evidence=IDA] [GO:0010629 "negative regulation of gene
expression" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030238 "male sex determination" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:2000020 "positive
regulation of male gonad development" evidence=ISO]
InterPro:IPR009071 MGI:MGI:98660 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0016607 GO:GO:0006351
GO:GO:0008584 GO:GO:0000122 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816
GO:GO:0030238 CTD:6736 HOVERGEN:HBG008712 KO:K09266
OrthoDB:EOG49079Z EMBL:X67204 EMBL:U03645 EMBL:X55491
IPI:IPI00113716 PIR:S35565 PIR:S43344 RefSeq:NP_035694.1
UniGene:Mm.377114 ProteinModelPortal:Q05738 SMR:Q05738
MINT:MINT-1367342 STRING:Q05738 PhosphoSite:Q05738 PRIDE:Q05738
Ensembl:ENSMUST00000091178 GeneID:21674 KEGG:mmu:21674
InParanoid:Q05738 NextBio:300962 Bgee:Q05738 CleanEx:MM_SRY
Genevestigator:Q05738 GermOnline:ENSMUSG00000069036
InterPro:IPR027151 PANTHER:PTHR10270:SF84 Uniprot:Q05738
Length = 395
Score = 109 (43.4 bits), Expect = 0.00040, P = 0.00040
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTPGQS 38
EKRPF EA+RL+ +H +++P+YKY+P R+ K +S
Sbjct: 50 EKRPFFQEAQRLKILHREKYPNYKYQPHRRAKVSQRS 86
>UNIPROTKB|Q4PIT4 [details] [associations]
symbol:egl-13 "Protein EGL-13, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0001708 GO:GO:0018991 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0040035 GO:GO:0030163 GO:GO:0009653
GO:GO:0040025 GO:GO:0045026 GeneTree:ENSGT00690000101789
EMBL:FO081738 UniGene:Cel.8590 GeneID:180833 KEGG:cel:CELE_T22B7.1
UCSC:T22B7.1c.2 CTD:180833 HOGENOM:HOG000020384 NextBio:911168
RefSeq:NP_001024920.1 ProteinModelPortal:Q4PIT4 SMR:Q4PIT4
STRING:Q4PIT4 EnsemblMetazoa:T22B7.1c.1 EnsemblMetazoa:T22B7.1c.2
WormBase:T22B7.1c ArrayExpress:Q4PIT4 Uniprot:Q4PIT4
Length = 422
Score = 108 (43.1 bits), Expect = 0.00059, P = 0.00059
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EK+P+ +E RL +HM++HPDY+YRPR K
Sbjct: 326 EKQPYYEEQSRLSKLHMEQHPDYRYRPRPK 355
>WB|WBGene00001182 [details] [associations]
symbol:egl-13 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0009653 "anatomical
structure morphogenesis" evidence=IMP] [GO:0040025 "vulval
development" evidence=IMP] [GO:0045026 "plasma membrane fusion"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0001708 "cell fate specification" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0001708
GO:GO:0018991 GO:GO:0040011 GO:GO:0003700 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0040035
GO:GO:0030163 GO:GO:0009653 GO:GO:0040025 GO:GO:0045026
GeneTree:ENSGT00690000101789 eggNOG:NOG253815 EMBL:FO081738
EMBL:AF097319 PIR:T25909 PIR:T43675 RefSeq:NP_001024918.1
UniGene:Cel.8590 HSSP:P35710 ProteinModelPortal:Q23045 SMR:Q23045
IntAct:Q23045 STRING:Q23045 PRIDE:Q23045 EnsemblMetazoa:T22B7.1a
GeneID:180833 KEGG:cel:CELE_T22B7.1 UCSC:T22B7.1c.2 CTD:180833
WormBase:T22B7.1a HOGENOM:HOG000020384 InParanoid:Q23045
OMA:STISDHT NextBio:911168 ArrayExpress:Q23045 Uniprot:Q23045
Length = 470
Score = 108 (43.1 bits), Expect = 0.00069, P = 0.00069
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EK+P+ +E RL +HM++HPDY+YRPR K
Sbjct: 374 EKQPYYEEQSRLSKLHMEQHPDYRYRPRPK 403
>UNIPROTKB|Q23045 [details] [associations]
symbol:egl-13 "Protein EGL-13, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0001708 GO:GO:0018991 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0040035 GO:GO:0030163 GO:GO:0009653
GO:GO:0040025 GO:GO:0045026 GeneTree:ENSGT00690000101789
eggNOG:NOG253815 EMBL:FO081738 EMBL:AF097319 PIR:T25909 PIR:T43675
RefSeq:NP_001024918.1 UniGene:Cel.8590 HSSP:P35710
ProteinModelPortal:Q23045 SMR:Q23045 IntAct:Q23045 STRING:Q23045
PRIDE:Q23045 EnsemblMetazoa:T22B7.1a GeneID:180833
KEGG:cel:CELE_T22B7.1 UCSC:T22B7.1c.2 CTD:180833 WormBase:T22B7.1a
HOGENOM:HOG000020384 InParanoid:Q23045 OMA:STISDHT NextBio:911168
ArrayExpress:Q23045 Uniprot:Q23045
Length = 470
Score = 108 (43.1 bits), Expect = 0.00069, P = 0.00069
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 EKRPFIDEAKRLRAMHMKEHPDYKYRPRRK 31
EK+P+ +E RL +HM++HPDY+YRPR K
Sbjct: 374 EKQPYYEEQSRLSKLHMEQHPDYRYRPRPK 403
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 213 174 0.00075 109 3 11 22 0.45 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 175
No. of states in DFA: 539 (57 KB)
Total size of DFA: 141 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.52u 0.13s 22.65t Elapsed: 00:00:01
Total cpu time: 22.54u 0.13s 22.67t Elapsed: 00:00:01
Start: Thu Aug 15 12:20:35 2013 End: Thu Aug 15 12:20:36 2013
WARNINGS ISSUED: 1