RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15632
(339 letters)
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase;
HET: TFC; 2.70A {Trichoplusia NI}
Length = 551
Score = 247 bits (633), Expect = 6e-78
Identities = 72/221 (32%), Positives = 106/221 (47%), Gaps = 24/221 (10%)
Query: 106 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQGVGISLPTWQGV---- 161
V + G +RG + K SF+G+PYA P+G++RF+ L WQ
Sbjct: 8 VVVRT-ESGWIRGLKRRAEGNKS-YASFRGVPYAKQPLGELRFK-ELQPLEPWQDELDAT 64
Query: 162 -------GREFLTFAHLPTRLIDYISTEALEDCLYLNVYTPMISTNVNQTEASQ-KLFPV 213
+ L + R + E C++ N++ P + + + ++ PV
Sbjct: 65 QEGPVCQQTDVLYGRIMRPRGMS-------EACIHANIHVPYYALPRDAADKNRFAGLPV 117
Query: 214 IFYIHGGSFRVGSSHSMT--PHYLLEKDVVLVTIQYRLGILGFLSLETNEIPGNMGFLDM 271
+ +IHGG F GS S P YL+ KDV+++T YRL + GFLSL + +PGN G DM
Sbjct: 118 LVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSVPGNAGLRDM 177
Query: 272 LLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPL 312
+ L+WV + F G + VTLMGQSAG AA S
Sbjct: 178 VTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKA 218
Score = 58.1 bits (141), Expect = 2e-09
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 31 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQN 75
V + G +RG + K SF+G+PYA P+G++RF+
Sbjct: 8 VVVRT-ESGWIRGLKRRAEGNKS-YASFRGVPYAKQPLGELRFKE 50
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase;
HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP:
c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A*
1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A*
2hrq_A* 3k9b_A* 1k4y_A*
Length = 542
Score = 238 bits (610), Expect = 1e-74
Identities = 78/223 (34%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 106 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQGVGISLPTWQGV---- 161
P V+ GKV G+ + + F GIP+A PP+G +RF W V
Sbjct: 6 PVVDT-VHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFT-PPQPAEPWSFVKNAT 63
Query: 162 ---------GREFLTFAHLPTRLIDYISTEALEDCLYLNVYTPMISTNVNQTEASQKLFP 212
+ + L T + I + EDCLYLN+YTP + P
Sbjct: 64 SYPPMCTQDPKAGQLLSELFTNRKENIPLKLSEDCLYLNIYTP-------ADLTKKNRLP 116
Query: 213 VIFYIHGGSFRVGSSHSMT-PHYLLEKDVVLVTIQYRLGILGFLSLETNEIPGNMGFLDM 271
V+ +IHGG VG++ + ++VV+VTIQYRLGI GF S GN G LD
Sbjct: 117 VMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQ 176
Query: 272 LLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPLVR 314
+ AL WV D+I SF G+ VT+ G+SAGG +V+ + SPL +
Sbjct: 177 VAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAK 219
Score = 59.7 bits (145), Expect = 4e-10
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 31 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQN 75
P V+ GKV G+ + + F GIP+A PP+G +RF
Sbjct: 6 PVVDT-VHGKVLGKFVSLEGFAQPVAIFLGIPFAKPPLGPLRFTP 49
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A
{Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A
1jmy_A
Length = 579
Score = 234 bits (598), Expect = 1e-72
Identities = 70/221 (31%), Positives = 105/221 (47%), Gaps = 22/221 (9%)
Query: 105 VPEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQGVGISLPTWQGVGRE 164
+ V + G V G + F+GIP+A P + + P WQG +
Sbjct: 3 LGSVYT-EGGFVEGVNKKLSLFGDSVDIFKGIPFAAAPKALEKPE----RHPGWQGT-LK 56
Query: 165 FLTFAHL-PTRLIDYISTEALEDCLYLNVYTPMISTNVNQTEASQKLFPVIFYIHGGSFR 223
+F + ST EDCLYLN++ P + E S L PV+ +I+GG+F
Sbjct: 57 AKSFKKRCLQATLTQDSTYGNEDCLYLNIWVP-----QGRKEVSHDL-PVMIWIYGGAFL 110
Query: 224 VGSSHSMT---------PHYLLEKDVVLVTIQYRLGILGFLSLETNEIPGNMGFLDMLLA 274
+G+S +V++VT YR+G LGFLS + +PGN G D +A
Sbjct: 111 MGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMA 170
Query: 275 LEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPLVRD 315
+ WV +I +F GD + +TL G+SAGGA+V+ SP +
Sbjct: 171 IAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKG 211
Score = 52.4 bits (126), Expect = 1e-07
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 30 VPEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVG 69
+ V + G V G + F+GIP+A P
Sbjct: 3 LGSVYT-EGGFVEGVNKKLSLFGDSVDIFKGIPFAAAPKA 41
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase,
cell adhesion, cell J glycoprotein, membrane,
postsynaptic cell membrane; HET: NAG; 1.80A {Rattus
norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A*
2vh8_A 3bl8_A*
Length = 574
Score = 229 bits (585), Expect = 1e-70
Identities = 73/234 (31%), Positives = 106/234 (45%), Gaps = 26/234 (11%)
Query: 106 PEVNIDKLGKVRG-RVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQ---------GV--GI 153
P V GK+RG + +++ + F G+PYA PP G+ RFQ +
Sbjct: 11 PLVTT-NFGKIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDIRNAT 69
Query: 154 SLPT--WQGVGREFLTFAHLPTRLIDYISTEAL------EDCLYLNVYTPMISTNVNQTE 205
Q + L LP + + + EDCLYLN+Y P +
Sbjct: 70 QFAPVCPQNIIDGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVP----TEDDIR 125
Query: 206 ASQKLFPVIFYIHGGSFRVGSSHSMTPHYLL-EKDVVLVTIQYRLGILGFLSLETNEIPG 264
S PV+ YIHGGS+ G+ + L +V+++T+ YRLG+LGFLS G
Sbjct: 126 DSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVLGFLSTGDQAAKG 185
Query: 265 NMGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPLVRDGEF 318
N G LD++ AL W +++I F GD +T+ G AGG+ V S G F
Sbjct: 186 NYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLF 239
Score = 56.3 bits (136), Expect = 5e-09
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 31 PEVNIDKLGKVRG-RVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQN 75
P V GK+RG + +++ + F G+PYA PP G+ RFQ
Sbjct: 11 PLVTT-NFGKIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQP 55
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase,
neurotransmitter cleavage, catalytic triad, alpha/beta
hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP:
c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A*
1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A
1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A*
1vxr_A* ...
Length = 537
Score = 227 bits (580), Expect = 3e-70
Identities = 83/228 (36%), Positives = 114/228 (50%), Gaps = 34/228 (14%)
Query: 106 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRF---QGVGISLPTWQGV- 161
VN K GKV G + I +F GIP+A PPVG MRF + W GV
Sbjct: 6 LLVNT-KSGKVMGTRVPVLSSH--ISAFLGIPFAEPPVGNMRFRRPE----PKKPWSGVW 58
Query: 162 -GREF---------LTFAHLPTRLIDYISTEALEDCLYLNVYTPMISTNVNQTEASQKLF 211
+ F + + E EDCLYLN++ P + +
Sbjct: 59 NASTYPNNCQQYVDEQFPGFSGSEMWNPNREMSEDCLYLNIWVP--------SPRPKST- 109
Query: 212 PVIFYIHGGSFRVGSSHSMT--PHYL-LEKDVVLVTIQYRLGILGFLSLE-TNEIPGNMG 267
V+ +I+GG F GSS YL ++VVLV++ YR+G GFL+L + E PGN+G
Sbjct: 110 TVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVG 169
Query: 268 FLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPLVRD 315
LD +AL+WV+D+I+ F GD VT+ G+SAGGA+V + SP RD
Sbjct: 170 LLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRD 217
Score = 54.3 bits (131), Expect = 2e-08
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 31 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQN 75
VN K GKV G + I +F GIP+A PPVG MRF+
Sbjct: 6 LLVNT-KSGKVMGTRVPVLSSH--ISAFLGIPFAEPPVGNMRFRR 47
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC
MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A*
1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A*
3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A*
2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Length = 529
Score = 225 bits (576), Expect = 9e-70
Identities = 76/225 (33%), Positives = 112/225 (49%), Gaps = 28/225 (12%)
Query: 106 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQGVGISLPTWQGV--GR 163
+ K GKVRG + +F GIPYA PP+G++RF+ SL W +
Sbjct: 4 IIIAT-KNGKVRGMQLTVFGGT--VTAFLGIPYAQPPLGRLRFK-KPQSLTKWSDIWNAT 59
Query: 164 EF---------LTFAHLPTRLIDYISTEALEDCLYLNVYTPMISTNVNQTEASQKLFPVI 214
++ +F + +T+ EDCLYLNV+ P + V+
Sbjct: 60 KYANSCCQNIDQSFPGFHGSEMWNPNTDLSEDCLYLNVWIP--------APKPKNA-TVL 110
Query: 215 FYIHGGSFRVGSSHSMT--PHYLL-EKDVVLVTIQYRLGILGFLSL-ETNEIPGNMGFLD 270
+I+GG F+ G+S +L + V++V++ YR+G LGFL+L E PGNMG D
Sbjct: 111 IWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFD 170
Query: 271 MLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPLVRD 315
LAL+WV +I +F G+ VTL G+SAG A+V+ L SP
Sbjct: 171 QQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHS 215
Score = 53.9 bits (130), Expect = 3e-08
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 31 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQN 75
+ K GKVRG + +F GIPYA PP+G++RF+
Sbjct: 4 IIIAT-KNGKVRGMQLTVFGGT--VTAFLGIPYAQPPLGRLRFKK 45
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod
glycosylated protein, hydrolase; HET: NAG FUC SCK SCU
P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A*
1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A*
2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A*
2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Length = 543
Score = 224 bits (573), Expect = 3e-69
Identities = 74/225 (32%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 106 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRF---QGVGISLPTWQGV- 161
V + + G++RG + + +F GIP+A PPVG RF + W GV
Sbjct: 8 LLVRV-RGGQLRGIRLKAPGGP--VSAFLGIPFAEPPVGSRRFMPPE----PKRPWSGVL 60
Query: 162 -GREF---------LTFAHLPTRLIDYISTEALEDCLYLNVYTPMISTNVNQTEASQKLF 211
F + + + E EDCLYLNV+TP +
Sbjct: 61 DATTFQNVCYQYVDTLYPGFEGTEMWNPNRELSEDCLYLNVWTP-------YPRPASPT- 112
Query: 212 PVIFYIHGGSFRVGSSHSMT--PHYLLEK-DVVLVTIQYRLGILGFLSL-ETNEIPGNMG 267
PV+ +I+GG F G++ +L + VLV++ YR+G GFL+L + E PGN+G
Sbjct: 113 PVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVG 172
Query: 268 FLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPL 312
LD LAL+WV ++I +F GD VTL G+SAG A+V + S
Sbjct: 173 LLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLP 217
Score = 54.3 bits (131), Expect = 2e-08
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 31 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQN 75
V + + G++RG + + +F GIP+A PPVG RF
Sbjct: 8 LLVRV-RGGQLRGIRLKAPGGP--VSAFLGIPFAEPPVGSRRFMP 49
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase
directed evolution; 1.50A {Bacillus subtilis} SCOP:
c.69.1.1 PDB: 1c7j_A 1c7i_A
Length = 489
Score = 210 bits (536), Expect = 3e-64
Identities = 75/221 (33%), Positives = 113/221 (51%), Gaps = 35/221 (15%)
Query: 106 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRF---QGVGISLPTWQGVG 162
V + GKV+G T+ ++ ++GIPYA PPVG+ RF + W+ V
Sbjct: 4 QIVTT-QYGKVKGT------TENGVHKWKGIPYAKPPVGQWRFKAPEPP----EVWEDV- 51
Query: 163 REFLTFAHL---PTRLIDYISTEAL---EDCLYLNVYTPMISTNVNQTEASQKLFPVIFY 216
+ + + P+ L+ TE EDCLY+NV+ P SQ L PV+ +
Sbjct: 52 LDATAYGPICPQPSDLLSLSYTELPRQSEDCLYVNVFAP--------DTPSQNL-PVMVW 102
Query: 217 IHGGSFRVGSSHSMT--PHYLLEK-DVVLVTIQYRLGILGFLSLET--NEIPGNMGFLDM 271
IHGG+F +G+ L + +V++VT+ YRLG GFL L + N+G LD
Sbjct: 103 IHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQ 162
Query: 272 LLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPL 312
AL+WV ++I +F GD + VT+ G+SAGG ++ L P
Sbjct: 163 AAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPA 203
Score = 49.2 bits (118), Expect = 1e-06
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 7/44 (15%)
Query: 31 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQ 74
V + GKV+G T+ ++ ++GIPYA PPVG+ RF+
Sbjct: 4 QIVTT-QYGKVKGT------TENGVHKWKGIPYAKPPVGQWRFK 40
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase,
hydrolase; 1.58A {Geobacillus stearothermophilus} PDB:
2ogs_A
Length = 498
Score = 208 bits (532), Expect = 1e-63
Identities = 77/226 (34%), Positives = 113/226 (50%), Gaps = 40/226 (17%)
Query: 106 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRF---QGVGISLPTWQGVG 162
V + G++RG + ++ ++GIPYA PVG+ RF + W GV
Sbjct: 4 TVVET-RYGRLRGEMN------EGVFVWKGIPYAKAPVGERRFLPPEPP----DAWDGV- 51
Query: 163 REFLTFAHLPTRLIDYISTEAL--------EDCLYLNVYTPMISTNVNQTEASQKLFPVI 214
RE +F + + D I + L ED LYLN+++P +K PV+
Sbjct: 52 REATSFGPVVMQPSDPIFSGLLGRMSEAPSEDGLYLNIWSP--------AADGKKR-PVL 102
Query: 215 FYIHGGSFRVGSSHSMT--PHYLLEK-DVVLVTIQYRLGILGFLSL-----ETNEIPGNM 266
F+IHGG+F GS S + DVV+VTI YR+ + GFL L E GN+
Sbjct: 103 FWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNL 162
Query: 267 GFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPL 312
G LD + AL WV ++I +F GD + +T+ G+SAG A+V L+ P
Sbjct: 163 GILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPE 208
Score = 48.0 bits (115), Expect = 2e-06
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Query: 31 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQ 74
V + G++RG + ++ ++GIPYA PVG+ RF
Sbjct: 4 TVVET-RYGRLRGEMN------EGVFVWKGIPYAKAPVGERRFL 40
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse,
membrane, nerve, muscle neurotransmitter degradation,
glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila
melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Length = 585
Score = 205 bits (524), Expect = 1e-61
Identities = 69/258 (26%), Positives = 102/258 (39%), Gaps = 55/258 (21%)
Query: 106 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRF---QGVGISLPTWQGV- 161
V G VRGR + ++ + GIPYA PPV +RF W GV
Sbjct: 5 LVVQT-SSGPVRGRSVTVQGRE--VHVYTGIPYAKPPVEDLRFRKPV----PAEPWHGVL 57
Query: 162 -GREF---------LTFAHLPTRLIDYISTEALEDCLYLNVYTP---------------- 195
F I +T EDCLY+NV+ P
Sbjct: 58 DATGLSATCVQERYEYFPGFSGEEIWNPNTNVSEDCLYINVWAPAKARLRHGRGANGGEH 117
Query: 196 --------MISTNVNQTEASQKLFPVIFYIHGGSFRVGSSHSMT--PHYLLEK-DVVLVT 244
+ + + P++ +I+GG F GS+ + +V++ +
Sbjct: 118 PNGKQADTDHLIHNGNPQNTTNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVAS 177
Query: 245 IQYRLGILGFLSL-------ETNEIPGNMGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQ 297
QYR+G GFL L E PGN+G D LA+ W+ D+ +F G+ +TL G+
Sbjct: 178 FQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGE 237
Query: 298 SAGGAAVTFFLTSPLVRD 315
SAG ++V L SP+ R
Sbjct: 238 SAGSSSVNAQLMSPVTRG 255
Score = 50.2 bits (120), Expect = 6e-07
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 31 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQ 74
V G VRGR + ++ + GIPYA PPV +RF+
Sbjct: 5 LVVQT-SSGPVRGRSVTVQGRE--VHVYTGIPYAKPPVEDLRFR 45
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H;
HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Length = 522
Score = 202 bits (517), Expect = 3e-61
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 21/220 (9%)
Query: 106 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQGVGISLPTWQGVGREF 165
P +N+ + +G + + F G+ YA PP+G +RF+ P Q + +
Sbjct: 11 PVINLGY-ARYQGVRLEAG-----VDEFLGMRYASPPIGDLRFRAP-QDPPANQTL-QSA 62
Query: 166 LTFAHL-PTRLIDYISTEALEDCLYLNVYTPMISTNVNQTEASQKLFPVIFYIHGGSFRV 224
+ + + + EDCL++NV+ P + + KL PV +I GG +
Sbjct: 63 TEYGPICIGLDEEESPGDISEDCLFINVFKP------STATSQSKL-PVWLFIQGGGYAE 115
Query: 225 GSSHSMTPHYLLE---KDVVLVTIQYRLGILGFLSLET--NEIPGNMGFLDMLLALEWVN 279
S+ + +++ +V VT YR+G LGFL+ E N G LD AL WV
Sbjct: 116 NSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVK 175
Query: 280 DHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPLVRDGEFF 319
+I F GD + + + G SAG +V + L++ +D F
Sbjct: 176 QYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLF 215
Score = 47.0 bits (112), Expect = 5e-06
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Query: 31 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQ 74
P +N+ + +G + + F G+ YA PP+G +RF+
Sbjct: 11 PVINLGY-ARYQGVRLEAG-----VDEFLGMRYASPPIGDLRFR 48
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A
{Galactomyces geotrichum} SCOP: c.69.1.17
Length = 544
Score = 190 bits (485), Expect = 2e-56
Identities = 66/245 (26%), Positives = 101/245 (41%), Gaps = 48/245 (19%)
Query: 106 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQ---------------- 149
P ++ + G + + +F+GIP+A PP+ +RF+
Sbjct: 3 PTAVLNGNEVISGV------LEGKVDTFKGIPFADPPLNDLRFKHPQPFTGSYQGLKAND 56
Query: 150 -----------GVGISLPTWQGVGREFLTFAHLPTRLIDYISTEALEDCLYLNVYTPMIS 198
L G+ + P + + EDCLYLNV+ P
Sbjct: 57 FSPACMQLDPGNSLTLLDKALGLAKVIPEEFRGPLYDMAKGTVSMNEDCLYLNVFRP--- 113
Query: 199 TNVNQTEASQKLFPVIFYIHGGSFRVGSSHSMTPHYL------LEKDVVLVTIQYRLGIL 252
T+ KL PV+ +I+GG+F GSS + + + + VV V+I YR G
Sbjct: 114 ---AGTKPDAKL-PVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPF 169
Query: 253 GFLSL--ETNEIPGNMGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTS 310
GFL T E N G D LEWV+D+I +F GD + V + G+SAG +V L +
Sbjct: 170 GFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIA 229
Query: 311 PLVRD 315
+
Sbjct: 230 YGGDN 234
Score = 45.5 bits (108), Expect = 1e-05
Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 31 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQN 75
P ++ + G + + +F+GIP+A PP+ +RF++
Sbjct: 3 PTAVLNGNEVISGV------LEGKVDTFKGIPFADPPLNDLRFKH 41
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester
acylh hydrolase; HET: NAG F23; 1.40A {Candida
cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A*
1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A*
1gz7_A*
Length = 534
Score = 187 bits (477), Expect = 3e-55
Identities = 60/234 (25%), Positives = 89/234 (38%), Gaps = 41/234 (17%)
Query: 106 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQ---------GV----- 151
P + G + +F GIP+A PPVG +RF+
Sbjct: 2 PTAKLAN-GDTITGLNAII-----NEAFLGIPFAEPPVGNLRFKDPVPYSGSLNGQKFTS 55
Query: 152 ------GISLPTWQGVGREFLTFAHLPTRLIDYISTEALEDCLYLNVYTPMISTNVNQTE 205
+ + + EDCL +NV P T+
Sbjct: 56 YGPSCMQQNPEGTFEENLGKTALDLVMQSKVFQAVLPQSEDCLTINVVRP------PGTK 109
Query: 206 ASQKLFPVIFYIHGGSFRVGSSHSMTPHYL------LEKDVVLVTIQYRLGILGFLSLE- 258
A L PV+ +I GG F +GS P + + K ++ V + YR+ GFL+ +
Sbjct: 110 AGANL-PVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDD 168
Query: 259 -TNEIPGNMGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSP 311
E GN G D L ++WV D+I F GD + VT+ G+SAG +V L
Sbjct: 169 IKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWN 222
Score = 43.2 bits (102), Expect = 9e-05
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Query: 31 PEVNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMRFQN 75
P + G + +F GIP+A PPVG +RF++
Sbjct: 2 PTAKLAN-GDTITGLNAII-----NEAFLGIPFAEPPVGNLRFKD 40
>3h04_A Uncharacterized protein; protein with unknown function, structural
genomics, MCSG, PS protein structure initiative; 1.90A
{Staphylococcus aureus subsp}
Length = 275
Score = 66.8 bits (163), Expect = 8e-13
Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 28/134 (20%)
Query: 176 IDYISTEALEDCLYLNVYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGSSHSMTPHY- 234
I Y L + +Q VI YIHGG G ++ ++P Y
Sbjct: 4 IKYKVITKDAFALPYTIIKA----------KNQPTKGVIVYIHGGGLMFGKANDLSPQYI 53
Query: 235 -LLEKDVVLVTIQYRLGILGFLSLETNEIPGNMGFLDMLLALEWVNDHIRSFNGDKNCVT 293
+L + L+ + YRL E+ + D+ + + + +
Sbjct: 54 DILTEHYDLIQLSYRLL---------PEVSLDCIIEDVYASFDAIQSQY-----SNCPIF 99
Query: 294 LMGQSAGG--AAVT 305
G+S+G + +
Sbjct: 100 TFGRSSGAYLSLLI 113
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2,
protein structure initiative; 3.20A {Lactococcus lactis
subsp}
Length = 276
Score = 65.6 bits (160), Expect = 2e-12
Identities = 25/138 (18%), Positives = 51/138 (36%), Gaps = 12/138 (8%)
Query: 176 IDYISTEALEDCLYLNVYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGSSHSMTPH-- 233
+ ST +L D +++ Y N + FP I GG ++ S P
Sbjct: 13 LMNKSTFSLNDTAWVDFYQLQ-----NPRQNENYTFPAIIICPGGGYQHISQRESDPLAL 67
Query: 234 YLLEKDVVLVTIQYRLGILGFLSLETNEIPGNMGFLDMLLALEWVNDHIRSFNGDKNCVT 293
L + ++ + Y + + TN + ++ ++ + + + + V
Sbjct: 68 AFLAQGYQVLLLNYTVM-----NKGTNYNFLSQNLEEVQAVFSLIHQNHKEWQINPEQVF 122
Query: 294 LMGQSAGGAAVTFFLTSP 311
L+G SAGG ++ S
Sbjct: 123 LLGCSAGGHLAAWYGNSE 140
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural
genomics, joint center structural genomics, JCSG; HET:
EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Length = 277
Score = 62.9 bits (153), Expect = 1e-11
Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 13/133 (9%)
Query: 188 LYLNVYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGSSHSMTP--HYLLEKDVVLVTI 245
+ Y ++ E + +P++ GG F S P ++ + V +
Sbjct: 16 FQITAYWL---DQISDFETAVD-YPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVL 71
Query: 246 QYRLGILGFLSLETNEIPGNMGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVT 305
Y+L + ++ + ++W+ + + D + L G SAGG V
Sbjct: 72 NYQL-------IVGDQSVYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVA 124
Query: 306 FFLTSPLVRDGEF 318
+ +
Sbjct: 125 TYNGVATQPELRT 137
>3bjr_A Putative carboxylesterase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Length = 283
Score = 59.9 bits (145), Expect = 2e-10
Identities = 26/143 (18%), Positives = 43/143 (30%), Gaps = 14/143 (9%)
Query: 171 LPTRLIDYISTEALEDCLYLNVYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGSSHSM 230
L + + I + C L Y T A Q P I + GGS+
Sbjct: 15 LYFQGMQVIKQKLTATCAQLTGYLH-----QPDTNAHQTNLPAIIIVPGGSYTHIPVAQA 69
Query: 231 TPH--YLLEKDVVLVTIQYRLGILGFLSLETNEIPGNMGFLDMLLALEWVNDHIRSFNGD 288
++Y L + + + LD+ A+ + H ++ D
Sbjct: 70 ESLAMAFAGHGYQAFYLEYTLL-----TDQQPLGLAPV--LDLGRAVNLLRQHAAEWHID 122
Query: 289 KNCVTLMGQSAGGAAVTFFLTSP 311
+T G S GG V +
Sbjct: 123 PQQITPAGFSVGGHIVALYNDYW 145
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold,
hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A
{Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Length = 303
Score = 59.2 bits (143), Expect = 4e-10
Identities = 24/170 (14%), Positives = 47/170 (27%), Gaps = 28/170 (16%)
Query: 156 PTWQGVGREFLTFAHLPTRLIDYISTEALEDCLY------LNVYTPMISTNVNQTEASQK 209
V F+ R + ++ Y ++V+ E +
Sbjct: 30 EPNLAVLEHFVRVTKQHGRELTEKQGITVDHLRYGEGRQLVDVFYS---------EKTTN 80
Query: 210 LFPVIFYIHGGSFRVGS--SHSMTPHYLLEKDVVLVTIQYRLGILGFLSLETNEIPGNMG 267
P+ ++HGG ++ L+ + + + Y L + M
Sbjct: 81 QAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNL-------CPQVTLEQLMT 133
Query: 268 FLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPLVRDGE 317
L W+ D+ +T G AG + L P V +
Sbjct: 134 --QFTHFLNWIFDYTEMTKVSS--LTFAGHXAGAHLLAQILMRPNVITAQ 179
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase,
gibberellin signaling pathway, hydrolase, nucleus,
hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp}
PDB: 3ed1_A*
Length = 365
Score = 58.2 bits (141), Expect = 1e-09
Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 21/146 (14%)
Query: 169 AHLPTRLIDYISTEALEDCLYLNVYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGSSH 228
L R+ Y + + T I + A++ PVI + HGGSF S+
Sbjct: 73 VGLEVRI--YRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPF-PVIIFFHGGSFVHSSAS 129
Query: 229 SMTPHYLLEK-----DVVLVTIQYRLGILGFLSLETNEIPGNMGFLDMLLALEWVNDH-- 281
S L + V+V++ YR + E + P + D AL+WV
Sbjct: 130 STIYDSLCRRFVKLSKGVVVSVNYRR------APE-HRYPC--AYDDGWTALKWVMSQPF 180
Query: 282 IRSFNGDKNCVTLMGQSAGG--AAVT 305
+RS + V L G S+GG A
Sbjct: 181 MRSGGDAQARVFLSGDSSGGNIAHHV 206
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia
eriantha} PDB: 2o7v_A
Length = 338
Score = 57.0 bits (138), Expect = 2e-09
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 192 VYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGSSHSMTPHYLLEK-----DVVLVTIQ 246
++ P + S KL P++ Y HGG F + S+ S H + VV+ ++
Sbjct: 70 LFLP-----RHALYNSAKL-PLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVD 123
Query: 247 YRLGILGFLSLETNEIPGNMGFLDMLLALEWVNDHIRSF---NGDKNCVTLMGQSAGG-- 301
YRL + E + +P + D + AL+W+ D + D + +MG+SAGG
Sbjct: 124 YRL------APE-HRLPA--AYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNI 174
Query: 302 AAVT 305
A
Sbjct: 175 AYHA 178
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A,
alpha/beta hydrolase family; 1.85A {Bacillus subtilis}
SCOP: c.69.1.2
Length = 361
Score = 57.1 bits (138), Expect = 2e-09
Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 24/123 (19%)
Query: 190 LNVYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGSSHSMTPH-----YLLEKDVVLVT 244
L+V+ P + + P + Y HGG + ++ + H L V+V
Sbjct: 97 LHVFRP---------AGVEGVLPGLVYTHGGGMTILTTDNRV-HRRWCTDLAAAGSVVVM 146
Query: 245 IQYRLGILGFLSLETNEIPGNMGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG--A 302
+ +R P G D L A+ WV++H S V + G+S GG A
Sbjct: 147 VDFRNA-----WTAEGHHPFPSGVEDCLAAVLWVDEHRESLGLSG--VVVQGESGGGNLA 199
Query: 303 AVT 305
T
Sbjct: 200 IAT 202
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural
genomics CEN infectious disease, tuberculosis, O LIPW,
heroin esterase; 1.75A {Mycobacterium marinum}
Length = 317
Score = 56.5 bits (137), Expect = 2e-09
Identities = 23/103 (22%), Positives = 35/103 (33%), Gaps = 20/103 (19%)
Query: 211 FPVIFYIHGGSFRVGSSHSMTP---HYLLEKDVVLVTIQYRLGILGFLSLETNEIPGN-- 265
PV+ Y H G F +G+ + +V++ YRL P +
Sbjct: 85 APVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLA------------PEHPY 132
Query: 266 -MGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG--AAVT 305
D + L WV + D + + G SAG AA
Sbjct: 133 PAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGL 175
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP:
c.69.1.2 PDB: 1lzk_A
Length = 323
Score = 56.5 bits (137), Expect = 3e-09
Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 23/119 (19%)
Query: 192 VYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGSSHSMTP---HYLLEKDVVLVTIQYR 248
TP + + PV+ +IHGG F +G++ S P E + ++YR
Sbjct: 69 FVTP---------DNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYR 119
Query: 249 LGILGFLSLETNEIPGNMGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG--AAVT 305
L E D AL +++ H D + + + GQSAGG AA T
Sbjct: 120 LAP---------ETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGT 169
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary
alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A
3zwq_A
Length = 313
Score = 56.1 bits (136), Expect = 4e-09
Identities = 34/122 (27%), Positives = 46/122 (37%), Gaps = 30/122 (24%)
Query: 192 VYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGS--SHSMTPHYL-LEKDVVLVTIQYR 248
VY P + P + Y HGG F +GS +H L V+V++ YR
Sbjct: 67 VYRP----------RDGERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYR 116
Query: 249 LGILGFLSLETNEIPGN---MGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG--AA 303
L P + D A +WV D+ D + + G SAGG AA
Sbjct: 117 LA------------PEHKFPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAA 164
Query: 304 VT 305
VT
Sbjct: 165 VT 166
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO
PSI-2, protein structure initiative, midwest center for
STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Length = 274
Score = 55.6 bits (134), Expect = 4e-09
Identities = 14/105 (13%), Positives = 29/105 (27%), Gaps = 18/105 (17%)
Query: 206 ASQKLFPVIFYIHGGSFRVGSSHSMTP---HYLLEKDVVLVTIQYRLGILGFLSLETNEI 262
+ + + Y+HGG G+ + ++ + Y L
Sbjct: 22 TTTEPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLA---------PNT 72
Query: 263 PGNMGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG--AAVT 305
+ + + +N+ L G+SAGG
Sbjct: 73 KIDHILRTLTETFQLLNEE----IIQNQSFGLCGRSAGGYLMLQL 113
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor,
gibberellin, gibberellin signaling pathway, hydrolase,
nucleus, receptor, developmental protein; HET: GA3;
1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Length = 351
Score = 55.5 bits (134), Expect = 7e-09
Identities = 35/130 (26%), Positives = 50/130 (38%), Gaps = 25/130 (19%)
Query: 192 VYTPMISTNVNQ-------TEASQKLFPVIFYIHGGSFRVGSSHSMTPHYLL-----EKD 239
VY P + + PVI + HGGSF S++S L
Sbjct: 87 VYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCK 146
Query: 240 VVLVTIQYRLGILGFLSLETNEIPGNMGFLDMLLALEWVNDH--IRSFNGDKNCVTLMGQ 297
V+V++ YR + E N P + D +AL WVN ++S K + L G
Sbjct: 147 CVVVSVNYRR------APE-NPYPC--AYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGD 197
Query: 298 SAGG--AAVT 305
S+GG A
Sbjct: 198 SSGGNIAHNV 207
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A
{Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A
1qz3_A
Length = 310
Score = 55.3 bits (134), Expect = 7e-09
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 29/122 (23%)
Query: 192 VYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGS--SHSMTPHYL-LEKDVVLVTIQYR 248
+Y P E + +P + Y HGGS+ VG +H L + V+ ++ YR
Sbjct: 64 MYRP---------EGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYR 114
Query: 249 LGILGFLSLETNEIPGN---MGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG--AA 303
L P + D AL+W+ + F+ D + + G SAGG AA
Sbjct: 115 LA------------PEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAA 162
Query: 304 VT 305
VT
Sbjct: 163 VT 164
>1vkh_A Putative serine hydrolase; structural genomics, joint center
structural genomics, JCSG, protein structure initiative,
PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae}
SCOP: c.69.1.32
Length = 273
Score = 53.5 bits (128), Expect = 2e-08
Identities = 20/106 (18%), Positives = 33/106 (31%), Gaps = 22/106 (20%)
Query: 204 TEASQKLFPVIFYIHGGSFRVGS--SHSMTPH------YLLEKDVVLVTIQYRLGILGFL 255
E SQ + YIHGG++ + E V +I+YRL
Sbjct: 34 QEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRL------ 87
Query: 256 SLETNEIPGNMGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG 301
+ EI D + + + + ++G S G
Sbjct: 88 ---SPEITNPRNLYDAVSNITRLVK-----EKGLTNINMVGHSVGA 125
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE;
2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Length = 311
Score = 53.8 bits (130), Expect = 2e-08
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 20/102 (19%)
Query: 212 PVIFYIHGGSFRVGS--SHSMTPHYL-LEKDVVLVTIQYRLGILGFLSLETNEIPGN--- 265
PV+ Y HGG F + S SH + + +V++ YRL P +
Sbjct: 80 PVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLA------------PEHKFP 127
Query: 266 MGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG--AAVT 305
D A +WV ++ D + + + G SAGG AA
Sbjct: 128 AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAV 169
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme,
hydrolase, HSL, alpha/beta hydrolase fold; 2.3A
{Uncultured archaeon}
Length = 311
Score = 53.4 bits (129), Expect = 3e-08
Identities = 35/122 (28%), Positives = 44/122 (36%), Gaps = 30/122 (24%)
Query: 192 VYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGS--SHSMTPHYL-LEKDVVLVTIQYR 248
VY P P + Y HGG F GS +H L D V+V++ YR
Sbjct: 64 VYFP----------KKAAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYR 113
Query: 249 LGILGFLSLETNEIPGN---MGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG--AA 303
L P D AL+WV D D + + + G SAGG AA
Sbjct: 114 LA------------PEYKFPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAA 161
Query: 304 VT 305
V
Sbjct: 162 VV 163
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine
structural genomics, center for structural genomics of
INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella
typhimurium}
Length = 326
Score = 53.0 bits (128), Expect = 4e-08
Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 20/102 (19%)
Query: 212 PVIFYIHGGSFRVGS--SHSMTPHYL-LEKDVVLVTIQYRLGILGFLSLETNEIPGN--- 265
++Y+HGG F +G+ +H L ++ I Y L P
Sbjct: 88 ATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLS------------PQARYP 135
Query: 266 MGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG--AAVT 305
+ + + + H ++ + + G SAG A +
Sbjct: 136 QAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALAS 177
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold,
structural genomics, joint cente structural genomics,
JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Length = 262
Score = 51.1 bits (122), Expect = 1e-07
Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 17/108 (15%)
Query: 211 FPVIFYIHGGSFRVGSSHSMTPH--YLLEKDVVLVTIQYRLGILGFLSLETNEIPGNMGF 268
+ ++HGG + S + L K + Y L E+ +
Sbjct: 63 VGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELC---------PEVRISEIT 113
Query: 269 LDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPLVRDG 316
+ A+ I + L G SAGG V L ++ +
Sbjct: 114 QQISQAVTAAAKEIDGP------IVLAGHSAGGHLVARMLDPEVLPEA 155
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic,
dimer, archaea, R267G, hydro; 1.65A {Sulfolobus
tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Length = 323
Score = 51.1 bits (123), Expect = 2e-07
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 31/122 (25%)
Query: 192 VYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGS--SHSMTPHYL-LEKDVVLVTIQYR 248
VY P +Q + V+ Y HGG F +G S+ + V +++ YR
Sbjct: 81 VYYP----------KTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYR 130
Query: 249 LGILGFLSLETNEIPGN---MGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG--AA 303
L P N +D AL+WV ++ F K + + G SAGG AA
Sbjct: 131 LA------------PENKFPAAVVDSFDALKWVYNNSEKF-NGKYGIAVGGDSAGGNLAA 177
Query: 304 VT 305
VT
Sbjct: 178 VT 179
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured
bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A*
3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Length = 322
Score = 44.2 bits (105), Expect = 3e-05
Identities = 30/177 (16%), Positives = 48/177 (27%), Gaps = 51/177 (28%)
Query: 137 PYAIPPVGKMRFQGVGISLPTWQGVGREFLTFAHLPTRLIDYISTEALEDCLYLNVYTPM 196
P P+ MR ++ + E +T A
Sbjct: 33 PGTEVPLDVMRKGMEKVAFKAADDIQVEQVTVAGCAAEW-----------------VRA- 74
Query: 197 ISTNVNQTEASQKLFPVIFYIHGGSFRVGS--SH-SMTPHYLLEKDVVLVTIQYRLGILG 253
+ I Y+HGG + +GS +H SM + + YRL
Sbjct: 75 ---------PGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLA--- 122
Query: 254 FLSLETNEIPGN---MGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG--AAVT 305
P + D + A W+ D +++ G SAGG
Sbjct: 123 ---------PEHPFPAAVEDGVAAYRWLLDQ----GFKPQHLSISGDSAGGGLVLAV 166
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured
bacterium} PDB: 3dnm_A
Length = 322
Score = 43.4 bits (103), Expect = 5e-05
Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 24/102 (23%)
Query: 212 PVIFYIHGGSFRVGS--SH-SMTPHYLLEKDVVLVTIQYRLGILGFLSLETNEIPGN--- 265
I Y HGG + GS +H +T + L ++ YRL P N
Sbjct: 81 AHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLA------------PENPFP 128
Query: 266 MGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG--AAVT 305
D + A + G + + + G SAGG +
Sbjct: 129 AAVDDCVAAYRALLKT----AGSADRIIIAGDSAGGGLTTAS 166
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus
subsp}
Length = 326
Score = 40.8 bits (96), Expect = 4e-04
Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 25/102 (24%)
Query: 212 PVIFYIHGGSFRVGSSHSMTPHYLL------EKDVVLVTIQYRLGILGFLSLETNEIPGN 265
I YIHGG + S H+ L +V Y E +
Sbjct: 97 KKILYIHGGFNALQPSPF---HWRLLDKITLSTLYEVVLPIYPKTP---------EFHID 144
Query: 266 MGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG--AAVT 305
F + + + + N V +MG +GG A
Sbjct: 145 DTFQAIQRVYDQLVSEVGHQN-----VVVMGDGSGGALALSF 181
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga
maritima} PDB: 3doi_A
Length = 380
Score = 39.7 bits (92), Expect = 0.001
Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 12/114 (10%)
Query: 207 SQKLFPVIFYIHGGSFR-----------VGSSHSMTPHYLLEKDVVLVTIQYRLGILGFL 255
+ +P++ ++HG R G+ P Y + ++ Q +
Sbjct: 170 PDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNS-SWS 228
Query: 256 SLETNEIPGNMGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLT 309
+L T+ +L ++ + + +N D+N + + G S GG +
Sbjct: 229 TLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIM 282
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces
morookaensis} PDB: 3azp_A 3azq_A
Length = 662
Score = 38.3 bits (89), Expect = 0.003
Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 11/124 (8%)
Query: 192 VYTPMISTNVNQTEASQKLFPVIFYIHGG-SFRVGSSHSMTPHYLLEKDVVLVTIQYRLG 250
+Y P + + T + +L P + HGG + RV + + Y + + + + Y G
Sbjct: 408 IYPP---HSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYG-G 463
Query: 251 ILGFLSLETNEIPGNMG---FLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFF 307
G+ + G G D + D+ + + G SAGG
Sbjct: 464 STGYGRAYRERLRGRWGVVDVEDCAAVATAL---AEEGTADRARLAVRGGSAGGWTAASS 520
Query: 308 LTSP 311
L S
Sbjct: 521 LVST 524
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron
aquisition, structural genomics, PSI-2, protein
structure initiative; HET: CIT; 1.80A {Shigella flexneri
2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A*
3c8h_A 3mga_A*
Length = 403
Score = 36.5 bits (84), Expect = 0.011
Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 22/149 (14%)
Query: 170 HLPTRLIDYISTEALEDCLYLNVYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGSSHS 229
+P + I + S E L++ + ++T + + + P+ + G +
Sbjct: 165 EIPAKEIIWKS-ERLKNSRRVWIFTT--------GDVTAEERPLAVLLDGEFWAQSMPVW 215
Query: 230 MTPHYLLEKD----VVLVTIQYRLGILGFLSLETNEIPGNMGFLDMLLA--LEWVNDHIR 283
L + V V I + +E+P N F + L V
Sbjct: 216 PVLTSLTHRQQLPPAVYVLIDA-----IDTTHRAHELPCNADFWLAVQQELLPLVKVIAP 270
Query: 284 SFNGDKNCVTLMGQSAGG-AAVTFFLTSP 311
F+ + + GQS GG +A+ L P
Sbjct: 271 -FSDRADRTVVAGQSFGGLSALYAGLHWP 298
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty
acid synthase, acyl-carrier-protein, beta-ketoacyl RED
beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces
cerevisiae}
Length = 1688
Score = 36.4 bits (84), Expect = 0.014
Identities = 15/147 (10%), Positives = 32/147 (21%), Gaps = 38/147 (25%)
Query: 153 ISLPTWQGVG-----REFLTFAHLPTRLIDYISTEALEDCLYLNVYTPMISTNVNQTEAS 207
++ R L L + S T + N++
Sbjct: 1309 WGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTS--------TKA--NDKNESATI 1358
Query: 208 QKLFPVIFYIHGGSFRVGSSHSMTPHYL-----LEKDVVLVTIQYRLGILGFLSLETNEI 262
++ + G +T H L + I
Sbjct: 1359 NEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWM------------MNGALQILNSGII 1406
Query: 263 PGNMGF------LDMLLALEWVNDHIR 283
PGN L+ + + + ++
Sbjct: 1407 PGNRNADNVDKILEQFEYVLYPSKTLK 1433
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 36.6 bits (84), Expect = 0.014
Identities = 41/198 (20%), Positives = 61/198 (30%), Gaps = 69/198 (34%)
Query: 137 PYAIPPVGKMRFQGVGISLPTWQGVGREFLT-FAHL----------PTRLIDYIS--TEA 183
P P + + IS P +G + AH P L Y+ T
Sbjct: 222 PSNTPDKDYLLS--IPISCP---LIG---VIQLAHYVVTAKLLGFTPGELRSYLKGATGH 273
Query: 184 LEDCLYLNVYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGSSHSMTPHYLLEKDVVLV 243
+ L V + + + +K V+F+I G R + P+ L ++
Sbjct: 274 SQG-LVTAVAIAETDSWESFFVSVRKAITVLFFI--G-VR---CYEAYPNTSLPPSIL-- 324
Query: 244 TIQYRLGILGFLSLETNEIPGNMGFLDML----LALEWVNDHIRS--------------- 284
+ SLE NE G ML L E V D++
Sbjct: 325 --ED--------SLENNE--GVPSP--MLSISNLTQEQVQDYVNKTNSHLPAGKQVEISL 370
Query: 285 FNGDKNCV------TLMG 296
NG KN V +L G
Sbjct: 371 VNGAKNLVVSGPPQSLYG 388
Score = 35.8 bits (82), Expect = 0.023
Identities = 46/296 (15%), Positives = 84/296 (28%), Gaps = 109/296 (36%)
Query: 59 QGI--------PYAIPPVGKMRFQNMNAHHLLHLFLYLTVVSIGFCKVTNITDFV---PE 107
QG Y + + + H GF +I D V P
Sbjct: 1624 QGSQEQGMGMDLYKTSKAAQDVWNRADNHFKDTY---------GF----SILDIVINNPV 1670
Query: 108 VNIDKLGKVRGRVTMSHWTKRLIYSFQGIPYAIPPVGKMR----FQGVGISLPTWQGVGR 163
G +G+ R+ ++ + + GK++ F+ + +
Sbjct: 1671 NLTIHFGGEKGK--------RIRENYSAMIFETIVDGKLKTEKIFKEINEHSTS------ 1716
Query: 164 EFLTFAHLPTRLIDYISTEALEDCLYLNVYT-P-MISTNVNQTEA--SQKLFPVIFYIHG 219
TF L+ +T+ +T P + E S+ L P G
Sbjct: 1717 --YTFRS-EKGLLS--ATQ----------FTQPALTLMEKAAFEDLKSKGLIPADATFAG 1761
Query: 220 GSFRVGSSHS-------------MTPHYLLEKDVV-LVTIQYRLGILGFLSLETNEIPGN 265
HS M+ +E +V +V YR G+ +++ +E
Sbjct: 1762 --------HSLGEYAALASLADVMS----IE-SLVEVV--FYR-GMTMQVAVPRDE--LG 1803
Query: 266 MGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPLVRDGEFFEI 321
M+ A+ N + + S A+ + + R G EI
Sbjct: 1804 RSNYGMI-AI----------NPGR-----VAASFSQEALQYVVERVGKRTGWLVEI 1843
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics,
JOIN for structural genomics, JCSG; 2.69A {Xanthomonas
campestris PV}
Length = 290
Score = 34.4 bits (79), Expect = 0.043
Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 12/98 (12%)
Query: 211 FPVIFYIHGGSFRVGSSHSMTP--HYLLEKDVVLVTIQYRLGILGFLSLETNEIPGNMGF 268
P + ++HG GS H + + +T R G + ++
Sbjct: 28 MPGVLFVHGWG---GSQHHSLVRAREAVGLGCICMTFDLR----G--HEGYASMRQSVTR 78
Query: 269 LDMLLALEWVNDHIRSFNG-DKNCVTLMGQSAGGAAVT 305
L ++ D + S D + + ++G S GG
Sbjct: 79 AQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSA 116
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas
mendocina}
Length = 258
Score = 33.9 bits (77), Expect = 0.056
Identities = 19/129 (14%), Positives = 32/129 (24%), Gaps = 28/129 (21%)
Query: 192 VYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGSSHSMTPHYLLEKDVVLVTIQYRLGI 251
+Y P PVI + +G + + H V+ +
Sbjct: 36 IYRP------RDLGQGGVRHPVILWGNGTGAGPSTYAGLLSH-WASHGFVVAAAET---- 84
Query: 252 LGFLSLETNEIPGNMGFLDMLLALEWVNDHIRSFNG------DKNCVTLMGQSAGGAAVT 305
+ML L+++ + G + V G S GG
Sbjct: 85 -----------SNAGTGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSI 133
Query: 306 FFLTSPLVR 314
VR
Sbjct: 134 MAGQDTRVR 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta
propeller, hydrolase, oligop SIZE selectivity; HET: GOL;
1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A*
1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Length = 582
Score = 34.0 bits (78), Expect = 0.077
Identities = 23/104 (22%), Positives = 32/104 (30%), Gaps = 16/104 (15%)
Query: 212 PVIFYIHGG-SFRVGSSHSMTPHYLLEKDVVLVTIQYRLGILG----FLSLETNEIPGNM 266
P + +HGG S L +V YR G G + + G
Sbjct: 361 PTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYR-GSTGYGEEWRLKIIGDPCGGE 419
Query: 267 GFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGG----AAVTF 306
D+ A W S + + MG S GG A+T
Sbjct: 420 -LEDVSAAARWA---RESGLASELYI--MGYSYGGYMTLCALTM 457
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase,
cinnamoyl/Fe esterase, hydroxycinammates, extracellular;
HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A*
3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Length = 270
Score = 32.9 bits (75), Expect = 0.12
Identities = 16/103 (15%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Query: 204 TEASQKLFPVIFYIHG-GSFRVGSSHSMTPHYLLEKDVVLVTIQYR-LGILGFLSLETNE 261
E +++ + HG + R S + L ++++ V + G +++
Sbjct: 39 EEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHG-------DSDG 91
Query: 262 IPGNMGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAV 304
NM L+ + + +++++ +N + L+G + GG
Sbjct: 92 KFENMTVLNEIEDANAILNYVKTDPHVRN-IYLVGHAQGGVVA 133
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7;
2.10A {Thermoanaerobacterium SP}
Length = 346
Score = 32.9 bits (75), Expect = 0.13
Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 21/133 (15%)
Query: 211 FPVIFYIHGGSFRVGSSHSMTPHYLLEKDVVLVTIQYR--------------LGILGFLS 256
P + HG S G + + +V + R + G +
Sbjct: 108 HPALIRFHGYSSNSGDWNDK--LNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHII 165
Query: 257 LETNEIPGNMGFLDMLLALEWVNDHIRSFNG-DKNCVTLMGQSAGGAAVTFFLTSPLVRD 315
++ NM F + L + + + D++ V +MG S GG +
Sbjct: 166 RGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAA----LE 221
Query: 316 GEFFEIGFIYAFI 328
++ Y F+
Sbjct: 222 PRVRKVVSEYPFL 234
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl
oligopeptidase family, serine PR proline-specific
peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas
gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Length = 706
Score = 33.1 bits (76), Expect = 0.13
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 25/124 (20%)
Query: 212 PVIFYIHGG--SFRV----GSSHSMTPHYLLEKDVVLVTIQYRLGILGFLSLE-TNEIPG 264
PVI Y++GG + V SS Y+ +K + T+ R G I
Sbjct: 486 PVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSR-GS-ANRGAAFEQVIHR 543
Query: 265 NMGFL---DMLLALEWV--NDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTS-PLVRDGEF 318
+G D + ++++ + D + + + G S GG F+T+ ++ G+
Sbjct: 544 RLGQTEMADQMCGVDFLKSQSWV-----DADRIGVHGWSYGG-----FMTTNLMLTHGDV 593
Query: 319 FEIG 322
F++G
Sbjct: 594 FKVG 597
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase
family S9, hydrolase; 2.80A {Stenotrophomonas
maltophilia}
Length = 741
Score = 32.8 bits (75), Expect = 0.16
Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 28/126 (22%)
Query: 212 PVIFYIHGG--------SFRVGSSHSMTPHYLLEKDVVLVTIQYRLGILGFLSLE-TNEI 262
PV Y++GG S+ H + YL ++ V+ ++ R G + +
Sbjct: 518 PVAVYVYGGPASQTVTDSWPGRGDH-LFNQYLAQQGYVVFSLDNR-GT-PRRGRDFGGAL 574
Query: 263 PGNMGFL---DMLLALEWV--NDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTS-PLVRDG 316
G G + D L + W+ + D + + G S GG ++T L +
Sbjct: 575 YGKQGTVEVADQLRGVAWLKQQPWV-----DPARIGVQGWSNGG-----YMTLMLLAKAS 624
Query: 317 EFFEIG 322
+ + G
Sbjct: 625 DSYACG 630
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta
hydrolase, alternative splicing, hydrolase,
mitochondrion, polymorphism, serine esterase; 2.10A
{Homo sapiens}
Length = 446
Score = 32.5 bits (73), Expect = 0.20
Identities = 16/102 (15%), Positives = 28/102 (27%), Gaps = 12/102 (11%)
Query: 208 QKLFPVIFYIHGGSFRVGSSHSMTPHYLLEKDVVLVTIQYRLGILGFLSLETNEIPGNMG 267
FP I + G G L K ++ + Y + + +
Sbjct: 171 PGPFPGIVDMFGTG---GGLLEYRASLLAGKGFAVMALAYYN------YEDLPKTMETLH 221
Query: 268 FLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLT 309
A+ ++ H V L+G S GG +
Sbjct: 222 LEYFEEAMNYLLSHPEV---KGPGVGLLGISKGGELCLSMAS 260
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes,
novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A
{Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A*
2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A*
1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A*
3bjm_A* 3eio_A* ...
Length = 740
Score = 32.1 bits (73), Expect = 0.27
Identities = 21/127 (16%), Positives = 47/127 (37%), Gaps = 23/127 (18%)
Query: 207 SQKLFPVIFYIHGG--SFRVGSSHSM--TPHYLLEKDVVLVTIQYRLGILGFLSLE-TNE 261
K +P++ ++ G S + + + + +++++ + R G G+ + +
Sbjct: 498 KSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGR-GS-GYQGDKIMHA 555
Query: 262 IPGNMGFL---DMLLALEWV--NDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTS-PLVRD 315
I +G D + A + D + + G S GG ++TS L
Sbjct: 556 INRRLGTFEVEDQIEAARQFSKMGFV-----DNKRIAIWGWSYGG-----YVTSMVLGSG 605
Query: 316 GEFFEIG 322
F+ G
Sbjct: 606 SGVFKCG 612
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast
activation protein alpha,fapalpha,
dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo
sapiens}
Length = 719
Score = 31.7 bits (72), Expect = 0.40
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 23/126 (18%)
Query: 208 QKLFPVIFYIHGG--SFRVGSSHS--MTPHYLLEKDVVLVTIQYRLGILGFLSLE-TNEI 262
K +P++ ++GG S V S + + ++ +V+ + R G F + +
Sbjct: 493 SKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGR-GT-AFQGDKLLYAV 550
Query: 263 PGNMGFL---DMLLALEWVNDH--IRSFNGDKNCVTLMGQSAGGAAVTFFLTS-PLVRDG 316
+G D + A+ + I D+ + + G S GG +++S L
Sbjct: 551 YRKLGVYEVEDQITAVRKFIEMGFI-----DEKRIAIWGWSYGG-----YVSSLALASGT 600
Query: 317 EFFEIG 322
F+ G
Sbjct: 601 GLFKCG 606
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha
sandwich, structural genomics, PSI-2; 1.83A {Bordetella
parapertussis 12822}
Length = 304
Score = 30.4 bits (67), Expect = 0.72
Identities = 17/100 (17%), Positives = 28/100 (28%), Gaps = 7/100 (7%)
Query: 212 PVIFYIHGGSFRVGSSHSMTPHYLLEKDVVLVTIQYRLGIL-------GFLSLETNEIPG 264
PV+ HG +++V + I + P
Sbjct: 55 PVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNPR 114
Query: 265 NMGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAV 304
++ L + + + D V L G SAGG V
Sbjct: 115 HVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFV 154
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal
hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Length = 306
Score = 29.3 bits (65), Expect = 1.8
Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 32/121 (26%)
Query: 191 NVYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGSSHSMTPHYLLEKDVVLVTIQYRLG 250
+Y P + I G + G+ S+ +L E R+
Sbjct: 86 TIYYP----------RENNTYGAIAISPGYT---GTQSSI--AWLGE----------RIA 120
Query: 251 ILGF--LSLETNEIPGNMGF--LDMLLALEWVNDHIRSF---NGDKNCVTLMGQSAGGAA 303
GF ++++TN + AL+++ S D + + +MG S GG
Sbjct: 121 SHGFVVIAIDTNTTLDQPDSRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGG 180
Query: 304 V 304
Sbjct: 181 T 181
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 1.60A {Thermus thermophilus} SCOP:
c.69.1.27
Length = 238
Score = 28.9 bits (64), Expect = 2.0
Identities = 14/105 (13%), Positives = 24/105 (22%), Gaps = 8/105 (7%)
Query: 212 PVIFYIHGGSFRVGSSHSMTP--HYLLEKDVVLVTIQYRLGIL--GFLSLETNEIPGNMG 267
++ +HG GS + E+ +L+ G +
Sbjct: 25 ALLLALHGLQ---GSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEV 81
Query: 268 FLDMLLALEWVNDHIRSF-NGDKNCVTLMGQSAGGAAVTFFLTSP 311
+ L E + L G S G L
Sbjct: 82 YRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEG 126
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine
esterase; 2.20A {Homo sapiens}
Length = 342
Score = 28.9 bits (65), Expect = 2.4
Identities = 8/43 (18%), Positives = 13/43 (30%), Gaps = 1/43 (2%)
Query: 267 GFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLT 309
F + + D ++ L+G S GGA
Sbjct: 110 DFHVFVRDVLQHVDSMQKDYPGLPVF-LLGHSMGGAIAILTAA 151
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold,
2-arachidonyl-glycerol, M associated, hydrolase,
hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A
{Homo sapiens} PDB: 3jw8_A 3jwe_A*
Length = 303
Score = 28.8 bits (65), Expect = 2.4
Identities = 8/43 (18%), Positives = 13/43 (30%), Gaps = 1/43 (2%)
Query: 267 GFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLT 309
F + + D ++ L+G S GGA
Sbjct: 92 DFHVFVRDVLQHVDSMQKDYPGLPVF-LLGHSMGGAIAILTAA 133
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Length = 305
Score = 28.8 bits (64), Expect = 2.7
Identities = 10/102 (9%), Positives = 22/102 (21%), Gaps = 12/102 (11%)
Query: 212 PVIFYIHGGSFRVGSSHSMTP--HYLLEKDVVLVTIQYRLGILGFLSLETNEIPGNMGFL 269
I G F YL + +G ++
Sbjct: 36 NTILIASG--FA-RRMDHFAGLAEYLSTNGFHVFRYDSL-HHVG----LSSGSIDEFTMT 87
Query: 270 DMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSP 311
+L V +++ + L+ S ++
Sbjct: 88 TGKNSLCTVYHWLQTKGTQN--IGLIAASLSARVAYEVISDL 127
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase;
alpha/beta hydrolase, META-cleavage pathway; 2.1A
{Arthrobacter nicotinovorans} SCOP: c.69.1.41
Length = 386
Score = 28.8 bits (64), Expect = 2.7
Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 18/98 (18%)
Query: 212 PVIFYIHGGSFRVGSSHSMTPH---YLLEKDVVLVTIQYRLGILGF-LSLETNEIPGNMG 267
P + + G S+ + +L++ + T G E I G
Sbjct: 153 PAVIMLGGL----ESTKEESFQMENLVLDRGMATATFDGP----GQGEMFEYKRIAG--- 201
Query: 268 FLDMLLALEWVNDHIRSFNG-DKNCVTLMGQSAGGAAV 304
D V D + + + ++G+S GG
Sbjct: 202 --DYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYA 237
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration
switch protein, hydrolase ACTI lyase; 2.20A {Vibrio
vulnificus} PDB: 3our_A
Length = 415
Score = 28.4 bits (63), Expect = 3.6
Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 10/95 (10%)
Query: 211 FPVIFYIHGGSFRVGSSHSMTPHYLLEKDVVLVTIQYR-LGILGFLSLETNEIPGNMGFL 269
PV+ G + +L + D+ ++T+ +G L + + L
Sbjct: 193 HPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVL 252
Query: 270 DMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAV 304
+ L ++ +V D + V L+G GG A+
Sbjct: 253 NELFSIPYV---------DHHRVGLIGFRFGGNAM 278
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus
thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A
2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Length = 439
Score = 28.3 bits (63), Expect = 3.8
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 211 FPVIFYIHGGSFRVGSSHSMTPHYLLEKDVVLV 243
F++H F+V S Y KDVV +
Sbjct: 368 MDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNL 400
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase
6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG
NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1
c.69.1.24
Length = 723
Score = 28.3 bits (63), Expect = 4.3
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 17/125 (13%)
Query: 208 QKLFPVIFYIHGG--SFRVGSSHSM--TPHYLLEKDVVLVTIQYRLGILGFLSLE-TNEI 262
+P++ + G S V + + V+V R G GF + +E+
Sbjct: 493 TTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGR-GS-GFQGTKLLHEV 550
Query: 263 PGNMGFL---DMLLALEWV--NDHIRSFNGDKNCVTLMGQSAGGAAVTFFLTSPLVRDGE 317
+G L D + A+ + +I D+ V + G+ GG T+ L + G+
Sbjct: 551 RRRLGLLEEKDQMEAVRTMLKEQYI-----DRTRVAVFGKDYGGYLSTYILPAKGENQGQ 605
Query: 318 FFEIG 322
F G
Sbjct: 606 TFTCG 610
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Length = 251
Score = 27.7 bits (62), Expect = 4.6
Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 264 GNMGFLDMLLALEWVNDHIRSFNGDKNCVTLMGQSAGGAAV 304
+ L + V D+ + + + + + G S GG +V
Sbjct: 75 EDHTLFKWLTNILAVVDYAKKLDFVTD-IYMAGHSQGGLSV 114
>3aev_A Translation initiation factor 2 subunit alpha; proteins-rRNA
complex, 16S rRNA, RNA-binding; 2.80A {Pyrococcus
horikoshii} PDB: 1yz6_A
Length = 275
Score = 27.7 bits (61), Expect = 5.6
Identities = 4/41 (9%), Positives = 14/41 (34%)
Query: 21 CKVTNITDFVPEVNIDKLGKVRGRVTMSHWTKRLIYSFQGI 61
V I ++ + +D+ + +S + + +
Sbjct: 17 ATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDY 57
Score = 27.7 bits (61), Expect = 5.6
Identities = 4/41 (9%), Positives = 14/41 (34%)
Query: 96 CKVTNITDFVPEVNIDKLGKVRGRVTMSHWTKRLIYSFQGI 136
V I ++ + +D+ + +S + + +
Sbjct: 17 ATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDY 57
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG,
P structure initiative; 1.80A {Listeria innocua}
Length = 254
Score = 27.5 bits (60), Expect = 5.8
Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 19/112 (16%)
Query: 212 PVIFYIHGGSFRVGSSHSMTP--HYLLEKD-------VVLVTIQYRLGILGFLSLETNEI 262
P+I IHG G++ S+ L+ + + V + ++ G L+ +
Sbjct: 5 PIIL-IHGSG---GNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRP 60
Query: 263 PGNMGFLDMLLAL----EWVNDHIRSFNGDKN--CVTLMGQSAGGAAVTFFL 308
GF +W+ + + +G S GG A+T++
Sbjct: 61 IIKFGFEQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYA 112
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase,
putative lipase; HET: CME CSO; 1.90A {Saccharomyces
cerevisiae} PDB: 2y6v_A*
Length = 398
Score = 27.4 bits (60), Expect = 8.2
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 12/136 (8%)
Query: 180 STEALEDCLYL--NVYTPMISTNVNQTEASQKLFPVIFYIHGGSFRVGSSHSMTPHYLLE 237
ST D L L +VYT + ++ + +L ++F +HG P +
Sbjct: 23 STLCATDRLELTYDVYTS--AERQRRSRTATRL-NLVF-LHGSGMSKVVWEYYLPRLVAA 78
Query: 238 KDVVLVTIQ--YRLGILGF-LSLETNE--IPGNMGFLDMLL-ALEWVNDHIRSFNGDKNC 291
I + + S N + N ++D L+ + S +
Sbjct: 79 DAEGNYAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPAL 138
Query: 292 VTLMGQSAGGAAVTFF 307
++G S GG
Sbjct: 139 NVVIGHSMGGFQALAC 154
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like,
FTS mutant suppressor; 1.90A {Escherichia coli} PDB:
2uxv_A
Length = 451
Score = 26.9 bits (59), Expect = 9.9
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 212 PVIFYIHGGSFRVGSS--HSMTPHYLLEKDVVLV 243
P F+I G F++ + P KD V V
Sbjct: 366 PQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV 399
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.328 0.144 0.447
Gapped
Lambda K H
0.267 0.0586 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 5,488,655
Number of extensions: 335061
Number of successful extensions: 850
Number of sequences better than 10.0: 1
Number of HSP's gapped: 776
Number of HSP's successfully gapped: 92
Length of query: 339
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 245
Effective length of database: 4,077,219
Effective search space: 998918655
Effective search space used: 998918655
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.4 bits)