BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15634
(113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7SZS1|SX21A_DANRE Transcription factor Sox-21-A OS=Danio rerio GN=sox21a PE=2 SV=1
Length = 239
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 30/32 (93%)
Query: 29 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
H+KRPMNAFMVWSR QRRK+ALDNPKMHNS I
Sbjct: 7 HVKRPMNAFMVWSRAQRRKMALDNPKMHNSEI 38
>sp|Q24533|DICH_DROME SOX domain-containing protein dichaete OS=Drosophila melanogaster
GN=D PE=2 SV=1
Length = 382
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 27 EQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
E HIKRPMNAFMVWSR+QRR+IA DNPKMHNS I
Sbjct: 139 EGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEI 172
>sp|P53784|SOX3_MOUSE Transcription factor SOX-3 OS=Mus musculus GN=Sox3 PE=1 SV=2
Length = 375
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 27 EQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
+ +KRPMNAFMVWSR QRRK+AL+NPKMHNS I
Sbjct: 66 QDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEI 99
>sp|P43267|SOX15_MOUSE Protein SOX-15 OS=Mus musculus GN=Sox15 PE=2 SV=3
Length = 231
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 17/77 (22%)
Query: 1 MSLSSHHQHSYFSMPPGLDTSHLNLGEQH-----------------IKRPMNAFMVWSRI 43
M+L+S Q +S+ P T+ L LG Q +KRPMNAFMVWS +
Sbjct: 1 MALTSSSQAETWSLHPRASTASLPLGPQEQEAGGSPGASGGLPLEKVKRPMNAFMVWSSV 60
Query: 44 QRRKIALDNPKMHNSII 60
QRR++A NPKMHNS I
Sbjct: 61 QRRQMAQQNPKMHNSEI 77
>sp|Q6TC28|SRY_LUTLU Sex-determining region Y protein OS=Lutra lutra GN=SRY PE=3 SV=1
Length = 219
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ HI+RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQSHIRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|Q6TC27|SRY_ENHLU Sex-determining region Y protein OS=Enhydra lutris GN=SRY PE=3
SV=1
Length = 219
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ HI+RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQSHIRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|P41225|SOX3_HUMAN Transcription factor SOX-3 OS=Homo sapiens GN=SOX3 PE=1 SV=2
Length = 446
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 27 EQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
+ +KRPMNAFMVWSR QRRK+AL+NPKMHNS I
Sbjct: 136 QDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEI 169
>sp|P55863|SOX3A_XENLA Transcription factor Sox-3-A OS=Xenopus laevis GN=sox3-a PE=1
SV=1
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 16 PGLDTSHLNLGEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
PG + L + +KRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 26 PGGKGNASTLDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 70
>sp|Q6RVD7|SX21B_DANRE Transcription factor Sox-21-B OS=Danio rerio GN=sox21b PE=2 SV=1
Length = 245
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 29/32 (90%)
Query: 29 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
H+KRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 7 HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEI 38
>sp|Q9W7R6|SOX14_CHICK Transcription factor SOX-14 OS=Gallus gallus GN=SOX14 PE=2 SV=1
Length = 240
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%)
Query: 29 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
HIKRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 38
>sp|Q863B7|SRY_ELADA Sex-determining region Y protein OS=Elaphurus davidianus GN=SRY
PE=3 SV=1
Length = 229
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ H+KRPMNAF+VWSR +RRK+AL+NPKM NS I
Sbjct: 50 GQDHVKRPMNAFIVWSRERRRKVALENPKMQNSEI 84
>sp|Q863C0|SRY_PRZAL Sex-determining region Y protein OS=Przewalskium albirostris
GN=SRY PE=3 SV=1
Length = 229
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ H+KRPMNAF+VWSR +RRK+AL+NPKM NS I
Sbjct: 50 GQDHVKRPMNAFIVWSRERRRKVALENPKMQNSEI 84
>sp|Q04892|SOX14_MOUSE Transcription factor SOX-14 OS=Mus musculus GN=Sox14 PE=2 SV=2
Length = 240
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%)
Query: 29 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
HIKRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 38
>sp|P61259|SOX14_MACFA Transcription factor SOX-14 OS=Macaca fascicularis GN=SOX14 PE=2
SV=1
Length = 240
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%)
Query: 29 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
HIKRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 38
>sp|O95416|SOX14_HUMAN Transcription factor SOX-14 OS=Homo sapiens GN=SOX14 PE=2 SV=1
Length = 240
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%)
Query: 29 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
HIKRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 38
>sp|Q863D9|SRY_ALCAC Sex-determining region Y protein OS=Alces alces cameloides GN=SRY
PE=3 SV=1
Length = 229
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ H+KRPMNAF+VWSR +RRK+AL+NPKM NS I
Sbjct: 50 GQDHVKRPMNAFIVWSRERRRKVALENPKMQNSEI 84
>sp|Q32PP9|SOX14_DANRE Transcription factor Sox-14 OS=Danio rerio GN=sox14 PE=2 SV=1
Length = 238
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%)
Query: 29 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
HIKRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 38
>sp|A4QNG3|SOX14_XENTR Transcription factor Sox-14 OS=Xenopus tropicalis GN=sox14 PE=2
SV=1
Length = 239
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%)
Query: 29 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
HIKRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 38
>sp|Q863C2|SRY_AXIPR Sex-determining region Y protein OS=Axis porcinus GN=SRY PE=3
SV=1
Length = 229
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ H+KRPMNAF+VWSR +RRK+AL+NPKM NS I
Sbjct: 50 GQDHVKRPMNAFIVWSRERRRKVALENPKMQNSEI 84
>sp|Q9Y651|SOX21_HUMAN Transcription factor SOX-21 OS=Homo sapiens GN=SOX21 PE=2 SV=1
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 29/32 (90%)
Query: 29 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
H+KRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 7 HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEI 38
>sp|Q811W0|SOX21_MOUSE Transcription factor SOX-21 OS=Mus musculus GN=Sox21 PE=2 SV=1
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 29/32 (90%)
Query: 29 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
H+KRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 7 HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEI 38
>sp|B0ZTE2|SOX14_XENLA Transcription factor Sox-14 OS=Xenopus laevis GN=sox14 PE=2 SV=1
Length = 239
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 29/32 (90%)
Query: 29 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
HIKRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 38
>sp|B0ZTE1|SOX21_XENLA Transcription factor Sox-21 OS=Xenopus laevis GN=sox21 PE=2 SV=1
Length = 262
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 29/32 (90%)
Query: 29 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
H+KRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 7 HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEI 38
>sp|Q9DDD7|SX19B_DANRE Transcription factor Sox-19b OS=Danio rerio GN=sox19b PE=1 SV=1
Length = 292
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 2 SLSSHHQHSYFSMPPGLDTSHLNLGEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
+ + H S + PPG+D +KRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 30 GVGNAHHVSKTACPPGVDPM------DKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 82
>sp|Q9W7R5|SOX21_CHICK Transcription factor SOX-21 OS=Gallus gallus GN=SOX21 PE=2 SV=1
Length = 280
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 29/32 (90%)
Query: 29 HIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
H+KRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 7 HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEI 38
>sp|Q67EX7|SRY_MOSBE Sex-determining region Y protein OS=Moschus berezovskii GN=SRY
PE=3 SV=1
Length = 227
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ HIKRPMNAF+VWSR +RRK+AL+NP+M NS I
Sbjct: 50 GQDHIKRPMNAFIVWSRERRRKVALENPQMQNSEI 84
>sp|Q9BH08|SRY_CERNI Sex-determining region Y protein OS=Cervus nippon GN=SRY PE=3
SV=1
Length = 229
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 31/35 (88%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ H+KRPMNAF+VWSR +RRK+AL+NP+M NS I
Sbjct: 50 GQDHVKRPMNAFIVWSRERRRKVALENPQMQNSEI 84
>sp|Q68FA4|SOX3_XENTR Transcription factor Sox-3 OS=Xenopus tropicalis GN=sox3 PE=2
SV=1
Length = 307
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 27 EQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
++ +KRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 37 QERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 70
>sp|Q67EX6|SRY_MOSCH Sex-determining region Y protein OS=Moschus chrysogaster GN=SRY
PE=3 SV=1
Length = 227
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 31/35 (88%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ H+KRPMNAF+VWSR +RRK+AL+NP+M NS I
Sbjct: 50 GQDHVKRPMNAFIVWSRERRRKVALENPQMQNSEI 84
>sp|Q6P0E1|SOX2_DANRE Transcription factor Sox-2 OS=Danio rerio GN=sox2 PE=2 SV=1
Length = 315
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 28/31 (90%)
Query: 30 IKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
IKRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 38 IKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 68
>sp|P36395|SRY_SMIMA Sex-determining region Y protein OS=Sminthopsis macroura GN=SRY
PE=2 SV=1
Length = 208
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 30 IKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
+KRPMNAFMVWS+ QRRK+AL NPKMHNS I
Sbjct: 35 VKRPMNAFMVWSQTQRRKVALQNPKMHNSEI 65
>sp|P48430|SOX2_CHICK Transcription factor SOX-2 OS=Gallus gallus GN=SOX2 PE=1 SV=1
Length = 315
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 30 IKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
+KRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 39 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 69
>sp|P36393|SRY_PIG Sex-determining region Y protein OS=Sus scrofa GN=SRY PE=3 SV=2
Length = 208
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSIIFNCHIMHFL-CPQKIELKSKRDIHV 84
G+ +KRPMNAF+VWSR QRRK+AL+NP+M NS I +L C K+ ++++
Sbjct: 58 GQDRVKRPMNAFIVWSRDQRRKVALENPQMQNS-----EISKWLGCKWKMLTEAEKRPFF 112
Query: 85 EACRKSNLFDRDK 97
E ++ RDK
Sbjct: 113 EEAQRLQAVHRDK 125
>sp|P36390|SRY_HALGR Sex-determining region Y protein OS=Halichoerus grypus GN=SRY
PE=3 SV=2
Length = 232
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ ++RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|Q6TC33|SRY_PHOVI Sex-determining region Y protein OS=Phoca vitulina GN=SRY PE=3
SV=1
Length = 232
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ ++RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|Q6TC31|SRY_PHOLR Sex-determining region Y protein OS=Phoca largha GN=SRY PE=3 SV=1
Length = 232
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ ++RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|Q6TC46|SRY_EUMJU Sex-determining region Y protein OS=Eumetopias jubatus GN=SRY
PE=3 SV=1
Length = 220
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ ++RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|Q6TC45|SRY_ZALCA Sex-determining region Y protein OS=Zalophus californianus GN=SRY
PE=3 SV=1
Length = 220
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ ++RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|Q6TC34|SRY_PUSCA Sex-determining region Y protein OS=Pusa caspica GN=SRY PE=3 SV=1
Length = 232
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ ++RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|Q6TC43|SRY_CALUR Sex-determining region Y protein OS=Callorhinus ursinus GN=SRY
PE=3 SV=1
Length = 220
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ ++RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|Q6DGL6|SOX1A_DANRE Transcription factor Sox-1a OS=Danio rerio GN=sox1a PE=2 SV=2
Length = 336
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 30 IKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
+KRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 37 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 67
>sp|P47792|SX19A_DANRE Transcription factor Sox-19a OS=Danio rerio GN=sox19a PE=1 SV=2
Length = 297
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 30 IKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
+KRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 53 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 83
>sp|Q6TC44|SRY_ARCGZ Sex-determining region Y protein OS=Arctocephalus gazella GN=SRY
PE=3 SV=1
Length = 220
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ ++RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|Q6T724|SRY_ARCFO Sex-determining region Y protein OS=Arctocephalus forsteri GN=SRY
PE=3 SV=1
Length = 220
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ ++RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|Q6T723|SRY_ARCAU Sex-determining region Y protein OS=Arctocephalus australis
GN=SRY PE=3 SV=1
Length = 220
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ ++RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|Q6TC37|SRY_CYSCR Sex-determining region Y protein OS=Cystophora cristata GN=SRY
PE=3 SV=1
Length = 221
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ ++RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|O42569|SOX2_XENLA Transcription factor Sox-2 OS=Xenopus laevis GN=sox2 PE=2 SV=1
Length = 311
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 30 IKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
+KRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 37 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 67
>sp|Q6TC32|SRY_PHOHI Sex-determining region Y protein OS=Phoca hispida GN=SRY PE=3
SV=1
Length = 232
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ ++RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
>sp|P48432|SOX2_MOUSE Transcription factor SOX-2 OS=Mus musculus GN=Sox2 PE=1 SV=2
Length = 319
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 30 IKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
+KRPMNAFMVWSR QRRK+A +NPKMHNS I
Sbjct: 43 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 73
>sp|Q6TC36|SRY_PAGGO Sex-determining region Y protein OS=Pagophilus groenlandicus
GN=SRY PE=3 SV=1
Length = 221
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 GEQHIKRPMNAFMVWSRIQRRKIALDNPKMHNSII 60
G+ ++RPMNAFMVWSR QRRK+AL+NP+M NS I
Sbjct: 50 GQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEI 84
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.135 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,503,353
Number of Sequences: 539616
Number of extensions: 1429772
Number of successful extensions: 3770
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3537
Number of HSP's gapped (non-prelim): 236
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)