BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15636
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6EJB7|SOX3_DANRE Transcription factor Sox-3 OS=Danio rerio GN=sox3 PE=1 SV=1
Length = 300
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 69/87 (79%), Gaps = 3/87 (3%)
Query: 18 EGHIKRPMNALSLHSLHLGHHHS---EGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEI 74
E IK P+ + S+ G ++S + +KRPMNAFMVWSRGQRRKMA +NPKMHNSEI
Sbjct: 6 ETEIKSPIPQSNTGSVTGGKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEI 65
Query: 75 SKRLGAEWKLLTEMEKRPFIDEAKRLR 101
SKRLGA+WKLLT+ EKRPFIDEAKRLR
Sbjct: 66 SKRLGADWKLLTDAEKRPFIDEAKRLR 92
>sp|P53784|SOX3_MOUSE Transcription factor SOX-3 OS=Mus musculus GN=Sox3 PE=1 SV=2
Length = 375
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/58 (91%), Positives = 57/58 (98%)
Query: 44 IKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
+KRPMNAFMVWSRGQRRKMAL+NPKMHNSEISKRLGA+WKLLT+ EKRPFIDEAKRLR
Sbjct: 69 VKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLR 126
>sp|Q9W7R6|SOX14_CHICK Transcription factor SOX-14 OS=Gallus gallus GN=SOX14 PE=2 SV=1
Length = 240
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 43 HIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
HIKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRP+IDEAKRLR
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
>sp|P41225|SOX3_HUMAN Transcription factor SOX-3 OS=Homo sapiens GN=SOX3 PE=1 SV=2
Length = 446
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/58 (91%), Positives = 57/58 (98%)
Query: 44 IKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
+KRPMNAFMVWSRGQRRKMAL+NPKMHNSEISKRLGA+WKLLT+ EKRPFIDEAKRLR
Sbjct: 139 VKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLR 196
>sp|Q04892|SOX14_MOUSE Transcription factor SOX-14 OS=Mus musculus GN=Sox14 PE=2 SV=2
Length = 240
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 43 HIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
HIKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRP+IDEAKRLR
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
>sp|P61259|SOX14_MACFA Transcription factor SOX-14 OS=Macaca fascicularis GN=SOX14 PE=2
SV=1
Length = 240
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 43 HIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
HIKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRP+IDEAKRLR
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
>sp|O95416|SOX14_HUMAN Transcription factor SOX-14 OS=Homo sapiens GN=SOX14 PE=2 SV=1
Length = 240
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 43 HIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
HIKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRP+IDEAKRLR
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
>sp|Q24533|DICH_DROME SOX domain-containing protein dichaete OS=Drosophila melanogaster
GN=D PE=2 SV=1
Length = 382
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 57/61 (93%)
Query: 41 EGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRL 100
EGHIKRPMNAFMVWSR QRR++A DNPKMHNSEISKRLGAEWKLL E EKRPFIDEAKRL
Sbjct: 139 EGHIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRL 198
Query: 101 R 101
R
Sbjct: 199 R 199
>sp|A4QNG3|SOX14_XENTR Transcription factor Sox-14 OS=Xenopus tropicalis GN=sox14 PE=2
SV=1
Length = 239
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 43 HIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
HIKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRP+IDEAKRLR
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
>sp|B0ZTE2|SOX14_XENLA Transcription factor Sox-14 OS=Xenopus laevis GN=sox14 PE=2 SV=1
Length = 239
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 43 HIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
HIKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRP+IDEAKRLR
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
>sp|P47792|SX19A_DANRE Transcription factor Sox-19a OS=Danio rerio GN=sox19a PE=1 SV=2
Length = 297
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 53/58 (91%), Positives = 56/58 (96%)
Query: 44 IKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
+KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLLT+ EKRPFIDEAKRLR
Sbjct: 53 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLR 110
>sp|Q32PP9|SOX14_DANRE Transcription factor Sox-14 OS=Danio rerio GN=sox14 PE=2 SV=1
Length = 238
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 43 HIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
HIKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRP+IDEAKRLR
Sbjct: 7 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLR 65
>sp|P48430|SOX2_CHICK Transcription factor SOX-2 OS=Gallus gallus GN=SOX2 PE=1 SV=1
Length = 315
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 58/63 (92%)
Query: 39 HSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAK 98
+S +KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRPFIDEAK
Sbjct: 34 NSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAK 93
Query: 99 RLR 101
RLR
Sbjct: 94 RLR 96
>sp|Q2PG84|SOX1_XENLA Transcription factor Sox-1 OS=Xenopus laevis GN=sox1 PE=2 SV=1
Length = 393
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 60/66 (90%)
Query: 36 GHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFID 95
G+ S+ +KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWK+++E EKRPFID
Sbjct: 26 GNKASQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 85
Query: 96 EAKRLR 101
EAKRLR
Sbjct: 86 EAKRLR 91
>sp|P48432|SOX2_MOUSE Transcription factor SOX-2 OS=Mus musculus GN=Sox2 PE=1 SV=2
Length = 319
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 58/63 (92%)
Query: 39 HSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAK 98
+S +KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRPFIDEAK
Sbjct: 38 NSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAK 97
Query: 99 RLR 101
RLR
Sbjct: 98 RLR 100
>sp|Q6P0E1|SOX2_DANRE Transcription factor Sox-2 OS=Danio rerio GN=sox2 PE=2 SV=1
Length = 315
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 58/63 (92%)
Query: 39 HSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAK 98
+S IKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRPFIDEAK
Sbjct: 33 NSPDRIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAK 92
Query: 99 RLR 101
RLR
Sbjct: 93 RLR 95
>sp|P54231|SOX2_SHEEP Transcription factor SOX-2 OS=Ovis aries GN=SOX2 PE=3 SV=1
Length = 320
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 58/63 (92%)
Query: 39 HSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAK 98
+S +KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRPFIDEAK
Sbjct: 39 NSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAK 98
Query: 99 RLR 101
RLR
Sbjct: 99 RLR 101
>sp|P48431|SOX2_HUMAN Transcription factor SOX-2 OS=Homo sapiens GN=SOX2 PE=1 SV=1
Length = 317
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 58/63 (92%)
Query: 39 HSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAK 98
+S +KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRPFIDEAK
Sbjct: 36 NSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAK 95
Query: 99 RLR 101
RLR
Sbjct: 96 RLR 98
>sp|Q2Z1R2|SOX1B_DANRE Transcription factor Sox-1b OS=Danio rerio GN=sox1b PE=2 SV=1
Length = 340
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 59/66 (89%)
Query: 36 GHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFID 95
G ++ +KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKL++E EKRPFID
Sbjct: 29 GSKVNQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLMSEAEKRPFID 88
Query: 96 EAKRLR 101
EAKRLR
Sbjct: 89 EAKRLR 94
>sp|Q6RVD7|SX21B_DANRE Transcription factor Sox-21-B OS=Danio rerio GN=sox21b PE=2 SV=1
Length = 245
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 56/59 (94%)
Query: 43 HIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
H+KRPMNAFMVWSR QRRKMA +NPKMHNSEISKRLGAEWKLLTE EKRPFIDEAKRLR
Sbjct: 7 HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLR 65
>sp|Q9DDD7|SX19B_DANRE Transcription factor Sox-19b OS=Danio rerio GN=sox19b PE=1 SV=1
Length = 292
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/58 (91%), Positives = 57/58 (98%)
Query: 44 IKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
+KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLLT++EKRPFIDEAKRLR
Sbjct: 52 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDVEKRPFIDEAKRLR 109
>sp|Q6DGL6|SOX1A_DANRE Transcription factor Sox-1a OS=Danio rerio GN=sox1a PE=2 SV=2
Length = 336
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 59/66 (89%)
Query: 36 GHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFID 95
G ++ +KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWK+++E EKRPFID
Sbjct: 29 GSKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 88
Query: 96 EAKRLR 101
EAKRLR
Sbjct: 89 EAKRLR 94
>sp|O42569|SOX2_XENLA Transcription factor Sox-2 OS=Xenopus laevis GN=sox2 PE=2 SV=1
Length = 311
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/58 (91%), Positives = 56/58 (96%)
Query: 44 IKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
+KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRPFIDEAKRLR
Sbjct: 37 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLR 94
>sp|Q6NVN0|SOX2_XENTR Transcription factor Sox-2 OS=Xenopus tropicalis GN=sox2 PE=2 SV=1
Length = 311
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/58 (91%), Positives = 56/58 (96%)
Query: 44 IKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
+KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRPFIDEAKRLR
Sbjct: 37 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLR 94
>sp|Q7SZS1|SX21A_DANRE Transcription factor Sox-21-A OS=Danio rerio GN=sox21a PE=2 SV=1
Length = 239
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/59 (89%), Positives = 56/59 (94%)
Query: 43 HIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
H+KRPMNAFMVWSR QRRKMALDNPKMHNSEISKRLG EWKLL++ EKRPFIDEAKRLR
Sbjct: 7 HVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDEAKRLR 65
>sp|Q811W0|SOX21_MOUSE Transcription factor SOX-21 OS=Mus musculus GN=Sox21 PE=2 SV=1
Length = 276
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 56/59 (94%)
Query: 43 HIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
H+KRPMNAFMVWSR QRRKMA +NPKMHNSEISKRLGAEWKLLTE EKRPFIDEAKRLR
Sbjct: 7 HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLR 65
>sp|Q9Y651|SOX21_HUMAN Transcription factor SOX-21 OS=Homo sapiens GN=SOX21 PE=2 SV=1
Length = 276
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 56/59 (94%)
Query: 43 HIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
H+KRPMNAFMVWSR QRRKMA +NPKMHNSEISKRLGAEWKLLTE EKRPFIDEAKRLR
Sbjct: 7 HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLR 65
>sp|B0ZTE1|SOX21_XENLA Transcription factor Sox-21 OS=Xenopus laevis GN=sox21 PE=2 SV=1
Length = 262
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/59 (91%), Positives = 56/59 (94%)
Query: 43 HIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
H+KRPMNAFMVWSR QRRKMA +NPKMHNSEISKRLGAEWKLLTE EKRPFIDEAKRLR
Sbjct: 7 HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDEAKRLR 65
>sp|Q68FA4|SOX3_XENTR Transcription factor Sox-3 OS=Xenopus tropicalis GN=sox3 PE=2 SV=1
Length = 307
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 56/58 (96%)
Query: 44 IKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
+KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGA+WKLL++ EKRPFIDEAKRLR
Sbjct: 40 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSEKRPFIDEAKRLR 97
>sp|P48433|SOX3_CHICK Transcription factor SOX-3 OS=Gallus gallus GN=SOX3 PE=2 SV=1
Length = 312
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 58/66 (87%)
Query: 36 GHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFID 95
G + +KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGA+WKLL++ EKRPFID
Sbjct: 38 GCRSDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDAEKRPFID 97
Query: 96 EAKRLR 101
EAKRLR
Sbjct: 98 EAKRLR 103
>sp|A2TED3|SOX1_XENTR Transcription factor Sox-1 OS=Xenopus tropicalis GN=sox1 PE=2 SV=1
Length = 401
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 56/58 (96%)
Query: 44 IKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
+KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWK+++E EKRPFIDEAKRLR
Sbjct: 37 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLR 94
>sp|Q5FWM3|SOX3B_XENLA Transcription factor Sox-3-B OS=Xenopus laevis GN=sox3-b PE=2 SV=1
Length = 307
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 51/61 (83%), Positives = 57/61 (93%)
Query: 41 EGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRL 100
+ +KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGA+WKLL++ EKRPFIDEAKRL
Sbjct: 37 QDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSEKRPFIDEAKRL 96
Query: 101 R 101
R
Sbjct: 97 R 97
>sp|P53783|SOX1_MOUSE Transcription factor SOX-1 OS=Mus musculus GN=Sox1 PE=2 SV=1
Length = 391
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 56/58 (96%)
Query: 44 IKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
+KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWK+++E EKRPFIDEAKRLR
Sbjct: 51 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLR 108
>sp|O00570|SOX1_HUMAN Transcription factor SOX-1 OS=Homo sapiens GN=SOX1 PE=1 SV=2
Length = 391
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 56/58 (96%)
Query: 44 IKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
+KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWK+++E EKRPFIDEAKRLR
Sbjct: 51 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLR 108
>sp|O57401|SOX1_CHICK Transcription factor SOX-1 OS=Gallus gallus GN=SOX1 PE=2 SV=1
Length = 373
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 56/58 (96%)
Query: 44 IKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
+KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGAEWK+++E EKRPFIDEAKRLR
Sbjct: 48 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLR 105
>sp|Q9W7R5|SOX21_CHICK Transcription factor SOX-21 OS=Gallus gallus GN=SOX21 PE=2 SV=1
Length = 280
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/59 (89%), Positives = 56/59 (94%)
Query: 43 HIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
H+KRPMNAFMVWSR QRRKMA +NPKMHNSEISKRLGAEWKLL+E EKRPFIDEAKRLR
Sbjct: 7 HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLR 65
>sp|P55863|SOX3A_XENLA Transcription factor Sox-3-A OS=Xenopus laevis GN=sox3-a PE=1 SV=1
Length = 309
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/61 (81%), Positives = 57/61 (93%)
Query: 41 EGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRL 100
+ +KRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGA+WKLL++ +KRPFIDEAKRL
Sbjct: 37 QDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSDKRPFIDEAKRL 96
Query: 101 R 101
R
Sbjct: 97 R 97
>sp|P36395|SRY_SMIMA Sex-determining region Y protein OS=Sminthopsis macroura GN=SRY
PE=2 SV=1
Length = 208
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 54/63 (85%)
Query: 39 HSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAK 98
+ +KRPMNAFMVWS+ QRRK+AL NPKMHNSEISK+LG WKLL++ EKRPFIDEAK
Sbjct: 30 NCSSRVKRPMNAFMVWSQTQRRKVALQNPKMHNSEISKQLGVTWKLLSDSEKRPFIDEAK 89
Query: 99 RLR 101
RLR
Sbjct: 90 RLR 92
>sp|Q6TC28|SRY_LUTLU Sex-determining region Y protein OS=Lutra lutra GN=SRY PE=3 SV=1
Length = 219
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 63/92 (68%)
Query: 10 LHLGHHHSEGHIKRPMNALSLHSLHLGHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKM 69
L G SE P ++ + + HI+RPMNAFMVWSR QRRK+AL+NP+M
Sbjct: 20 LAFGRTSSEFWTNNPTSSYRCETGGNRTDSGQSHIRRPMNAFMVWSRDQRRKVALENPQM 79
Query: 70 HNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
NSEISKRLG +WK+LTE EKRPF +EA+R++
Sbjct: 80 QNSEISKRLGYQWKMLTEAEKRPFFEEAQRIQ 111
>sp|O60248|SOX15_HUMAN Protein SOX-15 OS=Homo sapiens GN=SOX15 PE=1 SV=1
Length = 233
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 47/58 (81%), Positives = 52/58 (89%)
Query: 44 IKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
+KRPMNAFMVWS QRR+MA NPKMHNSEISKRLGA+WKLL E EKRPF++EAKRLR
Sbjct: 49 VKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRLR 106
>sp|P43267|SOX15_MOUSE Protein SOX-15 OS=Mus musculus GN=Sox15 PE=2 SV=3
Length = 231
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 52/58 (89%)
Query: 44 IKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
+KRPMNAFMVWS QRR+MA NPKMHNSEISKRLGA+WKLL + EKRPF++EAKRLR
Sbjct: 47 VKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLR 104
>sp|Q6TC27|SRY_ENHLU Sex-determining region Y protein OS=Enhydra lutris GN=SRY PE=3 SV=1
Length = 219
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 62/92 (67%)
Query: 10 LHLGHHHSEGHIKRPMNALSLHSLHLGHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKM 69
L G SE P + + + HI+RPMNAFMVWSR QRRK+AL+NP+M
Sbjct: 20 LAFGRTSSELWTNNPTSNYRCETGGNRTDSGQSHIRRPMNAFMVWSRDQRRKVALENPQM 79
Query: 70 HNSEISKRLGAEWKLLTEMEKRPFIDEAKRLR 101
NSEISK+LG +WK+LTE EKRPF +EA+R++
Sbjct: 80 QNSEISKQLGYQWKMLTEAEKRPFFEEAQRIQ 111
>sp|Q864R1|SRY_BALBN Sex-determining region Y protein OS=Balaenoptera bonaerensis GN=SRY
PE=3 SV=1
Length = 204
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%)
Query: 36 GHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFID 95
G + +KRPMNAF+VWSR QRRK+AL+NP+M NSEISKRLG +WK+LTE EK+PF +
Sbjct: 46 GRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKMLTEAEKQPFFE 105
Query: 96 EAKRLR 101
EA+RLR
Sbjct: 106 EAQRLR 111
>sp|Q864R2|SRY_BALAC Sex-determining region Y protein OS=Balaenoptera acutorostrata
GN=SRY PE=3 SV=1
Length = 204
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%)
Query: 36 GHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFID 95
G + +KRPMNAF+VWSR QRRK+AL+NP+M NSEISKRLG +WK+LTE EK+PF +
Sbjct: 46 GRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKMLTEAEKQPFFE 105
Query: 96 EAKRLR 101
EA+RLR
Sbjct: 106 EAQRLR 111
>sp|Q864Q5|SRY_KOGSI Sex-determining region Y protein OS=Kogia sima GN=SRY PE=3 SV=1
Length = 216
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%)
Query: 36 GHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFID 95
G + +KRPMNAF+VWSR QRRK+AL+NP+M NSEISKRLG +WK+LTE EK+PF +
Sbjct: 46 GRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKMLTEAEKQPFFE 105
Query: 96 EAKRLR 101
EA+RLR
Sbjct: 106 EAQRLR 111
>sp|Q864Q9|SRY_BALPH Sex-determining region Y protein OS=Balaenoptera physalus GN=SRY
PE=3 SV=1
Length = 204
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%)
Query: 36 GHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFID 95
G + +KRPMNAF+VWSR QRRK+AL+NP+M NSEISKRLG +WK+LTE EK+PF +
Sbjct: 46 GRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKMLTEAEKQPFFE 105
Query: 96 EAKRLR 101
EA+RLR
Sbjct: 106 EAQRLR 111
>sp|Q864Q6|SRY_PHYMC Sex-determining region Y protein OS=Physeter macrocephalus GN=SRY
PE=3 SV=1
Length = 216
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%)
Query: 36 GHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFID 95
G + +KRPMNAF+VWSR QRRK+AL+NP+M NSEISKRLG +WK+LTE EK+PF +
Sbjct: 46 GRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKMLTEAEKQPFFE 105
Query: 96 EAKRLR 101
EA+RLR
Sbjct: 106 EAQRLR 111
>sp|Q864R0|SRY_BALMU Sex-determining region Y protein OS=Balaenoptera musculus GN=SRY
PE=3 SV=1
Length = 204
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%)
Query: 36 GHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFID 95
G + +KRPMNAF+VWSR QRRK+AL+NP+M NSEISKRLG +WK+LTE EK+PF +
Sbjct: 46 GRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKMLTEAEKQPFFE 105
Query: 96 EAKRLR 101
EA+RLR
Sbjct: 106 EAQRLR 111
>sp|Q864Q8|SRY_MEGNO Sex-determining region Y protein OS=Megaptera novaeangliae GN=SRY
PE=3 SV=1
Length = 204
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%)
Query: 36 GHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFID 95
G + +KRPMNAF+VWSR QRRK+AL+NP+M NSEISKRLG +WK+LTE EK+PF +
Sbjct: 46 GRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKMLTEAEKQPFFE 105
Query: 96 EAKRLR 101
EA+RLR
Sbjct: 106 EAQRLR 111
>sp|Q864Q7|SRY_EUBAS Sex-determining region Y protein OS=Eubalaena australis GN=SRY PE=3
SV=1
Length = 204
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%)
Query: 36 GHHHSEGHIKRPMNAFMVWSRGQRRKMALDNPKMHNSEISKRLGAEWKLLTEMEKRPFID 95
G + +KRPMNAF+VWSR QRRK+AL+NP+M NSEISKRLG +WK+LTE EK+PF +
Sbjct: 46 GRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKMLTEAEKQPFFE 105
Query: 96 EAKRLR 101
EA+RLR
Sbjct: 106 EAQRLR 111
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,306,095
Number of Sequences: 539616
Number of extensions: 1403878
Number of successful extensions: 4655
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 3987
Number of HSP's gapped (non-prelim): 665
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)