BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15639
(135 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q99NE5|RIMS1_MOUSE Regulating synaptic membrane exocytosis protein 1 OS=Mus musculus
GN=Rims1 PE=1 SV=2
Length = 1463
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENT--WRCSICRRK 63
C +C K+ D +C C K C C L N ++ W C++CR++
Sbjct: 138 TCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQ 191
>sp|Q9JIR4|RIMS1_RAT Regulating synaptic membrane exocytosis protein 1 OS=Rattus
norvegicus GN=Rims1 PE=1 SV=1
Length = 1615
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENT--WRCSICRRK 63
C +C K+ D +C C K C C L N ++ W C++CR++
Sbjct: 138 TCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQ 191
>sp|Q22366|RIM_CAEEL Rab-3-interacting molecule unc-10 OS=Caenorhabditis elegans
GN=unc-10 PE=1 SV=2
Length = 1563
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 13 CRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQ 65
C++C K+ D C+ C + C C + +++++ W CS+C+++ Q
Sbjct: 72 CQICQKTKFADGIGHKCFYCQLRSCARCGGRA---QSKNKAIWACSLCQKRQQ 121
>sp|Q86UR5|RIMS1_HUMAN Regulating synaptic membrane exocytosis protein 1 OS=Homo sapiens
GN=RIMS1 PE=1 SV=1
Length = 1692
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENT--WRCSICRRK 63
C +C K+ D +C C K C C L N ++ W C++CR++
Sbjct: 115 TCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQ 168
>sp|A8G0U0|RHLB_SHESH ATP-dependent RNA helicase RhlB OS=Shewanella sediminis (strain
HAW-EB3) GN=rhlB PE=3 SV=1
Length = 435
Score = 32.3 bits (72), Expect = 0.88, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 70 PVLSQNSTDSLLDVPVLEALQRRHSDVKIGSANSGAHP-ANQGLAPPRSPELRRHS 124
PV + +S L D+P + R+H+ G + SG P + AP R + RRHS
Sbjct: 380 PVTNYDSEALLDDIPAPVRVHRKHNSRPQGRSGSGGKPRSGNRNAPRRHDKTRRHS 435
>sp|A8T6P4|MYRIP_DANRE Rab effector MyRIP OS=Danio rerio GN=myrip PE=1 SV=1
Length = 838
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 27 RVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRAQPV-LSQNSTDSLL---- 81
R C +CH +C+ C SYS Q E + C+ C++ R Q + N+ S
Sbjct: 79 RQCLDCHYNICKSCCSYS-----QSERGYICAACQKSRHLRTQSLEWFYNNVKSRFKRFG 133
Query: 82 DVPVLEALQRRH 93
VL+ L R+H
Sbjct: 134 SAKVLKTLYRKH 145
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 17/67 (25%)
Query: 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTW-----RCSICRRKL 64
L C VCL F+ DD RV +C DC +TW C +CR +
Sbjct: 110 LEECSVCLSEFEEDDEGRVLPKCGHVFHVDCI-----------DTWFRSRSSCPLCRAPV 158
Query: 65 QSRAQPV 71
Q AQPV
Sbjct: 159 QP-AQPV 164
>sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=Homo sapiens GN=MLL3 PE=1
SV=3
Length = 4911
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 6 PAARLGNCRVCLKSFKPDDYSRVCYEC---HQKVCEDCASYSKLDENQDENTWRCSICR 61
P A L +C VC ++++ +D C +C VC++ + ++ EN + + CS+CR
Sbjct: 1080 PCASLSSCPVCYRNYREEDLILQCRQCDRWMHAVCQNLNTEEEV-ENVADIGFDCSMCR 1137
>sp|B8CHZ1|RHLB_SHEPW ATP-dependent RNA helicase RhlB OS=Shewanella piezotolerans (strain
WP3 / JCM 13877) GN=rhlB PE=3 SV=1
Length = 437
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 70 PVLSQNSTDSLLDVPVLEALQRRHSDVKIGSAN-SGAHP--ANQGLAPPRSPELRRHS 124
PV S +S L D+P + + R+ S S + SG+ P ++G AP R + RRHS
Sbjct: 380 PVTSYDSEALLDDIPAPKRIHRKPSSHSRNSRDRSGSRPQGGHRGNAPRRHDKTRRHS 437
>sp|A3D9I5|RHLB_SHEB5 ATP-dependent RNA helicase RhlB OS=Shewanella baltica (strain OS155
/ ATCC BAA-1091) GN=rhlB PE=3 SV=1
Length = 438
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 70 PVLSQNSTDSLLDVPVLEALQRRH----SDVKIGSANSGAHPANQGLAPPRSPELRRHS 124
PV + +S L D+P + R+H +++ S S G PPR RRHS
Sbjct: 380 PVSNYDSEALLADIPTPAKIHRKHPSGTRNLRDRSGTSRPGAQRSGARPPRHDRTRRHS 438
>sp|B8E670|RHLB_SHEB2 ATP-dependent RNA helicase RhlB OS=Shewanella baltica (strain
OS223) GN=rhlB PE=3 SV=1
Length = 438
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 70 PVLSQNSTDSLLDVPVLEALQRRH----SDVKIGSANSGAHPANQGLAPPRSPELRRHS 124
PV + +S L D+P + R+H +++ S S G PPR RRHS
Sbjct: 380 PVSNYDSEALLADIPTPAKIHRKHPSGTRNLRDRSGTSRPGAQRSGARPPRHDRTRRHS 438
>sp|Q5RFL4|ZFYV1_PONAB Zinc finger FYVE domain-containing protein 1 OS=Pongo abelii
GN=ZFYVE1 PE=2 SV=1
Length = 789
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 1 PKSDKPAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSIC 60
P +P +++ +C C SFK +D C C + C+ C+S ++ + +C
Sbjct: 592 PAYWRPNSQILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVC 651
Query: 61 RRKLQSR-AQPVLSQNSTD----SLLDVPVLEALQRRHS------DVKIGSANSGAHPA 108
++R Q +++ D +L+ V EA+Q D+ +G A PA
Sbjct: 652 DNCYEARNVQLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPA 710
>sp|Q9HBF4|ZFYV1_HUMAN Zinc finger FYVE domain-containing protein 1 OS=Homo sapiens
GN=ZFYVE1 PE=1 SV=1
Length = 777
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 1 PKSDKPAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSIC 60
P +P +++ +C C SFK +D C C + C+ C+S ++ + +C
Sbjct: 592 PAYWRPNSQILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVC 651
Query: 61 RRKLQSR-AQPVLSQNSTD----SLLDVPVLEALQRRHS------DVKIGSANSGAHPA 108
++R Q +++ D +L+ V EA+Q D+ +G A PA
Sbjct: 652 DNCYEARNVQLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPA 710
>sp|Q810J8|ZFYV1_MOUSE Zinc finger FYVE domain-containing protein 1 OS=Mus musculus
GN=Zfyve1 PE=2 SV=2
Length = 777
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 17/122 (13%)
Query: 1 PKSDKPAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWR---- 56
P +P +++ +C C SFK +D C C + C+ C+S ++ E W
Sbjct: 592 PAYWRPNSQILSCNQCATSFKDNDTKHHCRACGEGFCDSCSSKTR---PVPERGWGPAPV 648
Query: 57 --CSICR--RKLQSRAQPVLSQNSTDSLLDVPVLEALQRRHS------DVKIGSANSGAH 106
C C R +Q + + +L+ V EA+Q D+ +G A
Sbjct: 649 RVCDSCYDARNVQLDVTEAQADDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAAR 708
Query: 107 PA 108
PA
Sbjct: 709 PA 710
>sp|A9L5D5|RHLB_SHEB9 ATP-dependent RNA helicase RhlB OS=Shewanella baltica (strain
OS195) GN=rhlB PE=3 SV=1
Length = 438
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 70 PVLSQNSTDSLLDVPVLEALQRRH-SDVKIGSANSGA-HPANQ--GLAPPRSPELRRHS 124
PV + +S L D+P + R+H S + SGA P Q G PPR RRHS
Sbjct: 380 PVSNYDSEALLADIPTPAKIHRKHPSGTRNLRDRSGASRPGAQRSGARPPRHDRTRRHS 438
>sp|A6WTD3|RHLB_SHEB8 ATP-dependent RNA helicase RhlB OS=Shewanella baltica (strain
OS185) GN=rhlB PE=3 SV=1
Length = 438
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 70 PVLSQNSTDSLLDVPVLEALQRRH-SDVKIGSANSGA-HPANQ--GLAPPRSPELRRHS 124
PV + +S L D+P + R+H S + SGA P Q G PPR RRHS
Sbjct: 380 PVSNYDSEALLADIPTPAKIHRKHPSGTRNLRDRSGASRPGAQRSGARPPRHDRTRRHS 438
>sp|Q5R7K2|ZFY27_PONAB Protrudin OS=Pongo abelii GN=ZFYVE27 PE=2 SV=1
Length = 411
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 8/67 (11%)
Query: 6 PAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASY--------SKLDENQDENTWRC 57
P GNC C +F R C C C C S+ + E Q E + C
Sbjct: 343 PTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVC 402
Query: 58 SICRRKL 64
+ C + L
Sbjct: 403 ASCNQTL 409
>sp|Q96C24|SYTL4_HUMAN Synaptotagmin-like protein 4 OS=Homo sapiens GN=SYTL4 PE=1 SV=2
Length = 671
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 17/94 (18%)
Query: 3 SDKPAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRR 62
SD+ AR C+ L P + C C+ VC DC ++ E+ TWRC +C +
Sbjct: 59 SDRTCAR---CQESLGRLSPK--TNTCRGCNHLVCRDC----RIQESN--GTWRCKVCAK 107
Query: 63 KLQSRAQPVLSQNSTDSLLDVPVLEALQRRHSDV 96
+++ L + + D D V R S++
Sbjct: 108 EIE------LKKATGDWFYDQKVNRFAYRTGSEI 135
>sp|Q5T4F4|ZFY27_HUMAN Protrudin OS=Homo sapiens GN=ZFYVE27 PE=1 SV=1
Length = 411
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 8/67 (11%)
Query: 6 PAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASY--------SKLDENQDENTWRC 57
P GNC C +F R C C C C S+ + E Q E + C
Sbjct: 343 PTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVC 402
Query: 58 SICRRKL 64
+ C + L
Sbjct: 403 ASCNQTL 409
>sp|P82798|ATRX_MACEU Transcriptional regulator ATRX (Fragment) OS=Macropus eugenii
GN=ATRX PE=2 SV=1
Length = 497
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 24/80 (30%)
Query: 6 PAARLGNCRVCLKSFKPDDYSR-------------------VCYECHQKVCEDCA----S 42
P ++ C+ C K + DD SR C CH C+ C
Sbjct: 52 PTLKVLICKNCYKYYMSDDISRDADGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLG 111
Query: 43 YSKLDENQDENT-WRCSICR 61
+L DEN+ W C ICR
Sbjct: 112 RKELSAIMDENSQWYCYICR 131
>sp|Q6P7B7|ZFY27_RAT Protrudin OS=Rattus norvegicus GN=Zfyve27 PE=1 SV=2
Length = 404
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 8/67 (11%)
Query: 6 PAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASY--------SKLDENQDENTWRC 57
P GNC C +F R C C C C S+ + E Q E + C
Sbjct: 336 PTNNFGNCAGCAATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVC 395
Query: 58 SICRRKL 64
+ C + L
Sbjct: 396 ASCNQTL 402
>sp|Q8NFW9|MYRIP_HUMAN Rab effector MyRIP OS=Homo sapiens GN=MYRIP PE=1 SV=2
Length = 859
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
Query: 27 RVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRAQPV-LSQNSTDSLL---- 81
R C +C VC+ C SY K E W C +C++ RAQ + N+ S
Sbjct: 79 RQCGDCKFNVCKSCCSYQK-----HEKAWVCCVCQQARLLRAQSLEWFYNNVKSRFKRFG 133
Query: 82 DVPVLEALQRRH 93
VL+ L R+H
Sbjct: 134 SAKVLKNLYRKH 145
>sp|A8AAF8|ARGC_IGNH4 N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-
phosphate reductase OS=Ignicoccus hospitalis (strain
KIN4/I / DSM 18386 / JCM 14125) GN=argC PE=3 SV=1
Length = 356
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 12/61 (19%)
Query: 75 NSTDSLLDV--PVLEA---LQRRHSDVKIGSANSGA-------HPANQGLAPPRSPELRR 122
N+T S+L V P E L R DVK+GS+ +GA HP +G A P E R
Sbjct: 158 NATSSILAVLPPAAERIIDLDRIVVDVKVGSSEAGAKPYRGGHHPEREGTARPYDAEGHR 217
Query: 123 H 123
H
Sbjct: 218 H 218
>sp|Q8K3I4|MYRIP_MOUSE Rab effector MyRIP OS=Mus musculus GN=Myrip PE=1 SV=1
Length = 856
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 10/72 (13%)
Query: 27 RVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRAQPV-LSQNSTDSLL---- 81
R C EC VC+ C SY K E W C +C++ R Q + N+ S
Sbjct: 79 RRCGECKFSVCKSCCSYQK-----HEKLWVCCVCQQARLLRTQSLEWFYNNVKSRFKRFG 133
Query: 82 DVPVLEALQRRH 93
VL+ L R+H
Sbjct: 134 SAKVLKNLYRKH 145
>sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=Mus musculus GN=Mll3 PE=2
SV=2
Length = 4903
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 6 PAARLGNCRVCLKSFKPDDYSRVCYEC---HQKVCEDCASYSKLDENQDENTWRCSICR 61
P A L +C VC ++++ +D C +C VC++ + ++ EN + + CS+CR
Sbjct: 1073 PCASLSSCPVCCRNYREEDLILQCRQCDRWMHAVCQNLNTEEEV-ENVADIGFDCSMCR 1130
>sp|Q9JIS1|RIMS2_RAT Regulating synaptic membrane exocytosis protein 2 OS=Rattus
norvegicus GN=Rims2 PE=1 SV=1
Length = 1555
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRK 63
C +C K+ D C C K C C L N+ W C++CR++
Sbjct: 91 TCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNK--VMWVCNLCRKQ 140
>sp|Q9EQZ7|RIMS2_MOUSE Regulating synaptic membrane exocytosis protein 2 OS=Mus musculus
GN=Rims2 PE=1 SV=1
Length = 1530
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRK 63
C +C K+ D C C K C C L N+ W C++CR++
Sbjct: 131 TCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNK--VMWVCNLCRKQ 180
>sp|Q9UQ26|RIMS2_HUMAN Regulating synaptic membrane exocytosis protein 2 OS=Homo sapiens
GN=RIMS2 PE=1 SV=2
Length = 1411
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRK 63
C +C K+ D C C K C C L N+ W C++CR++
Sbjct: 122 TCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNK--VMWVCNLCRKQ 171
>sp|Q7TNY7|MYRIP_RAT Rab effector MyRIP OS=Rattus norvegicus GN=Myrip PE=1 SV=1
Length = 856
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 27 RVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRAQPV 71
R C EC VC+ C SY K E W C +C++ R Q +
Sbjct: 79 RRCGECKFSVCKSCCSYQK-----HEKLWVCCVCQQARLLRTQSL 118
>sp|Q8NF64|ZMIZ2_HUMAN Zinc finger MIZ domain-containing protein 2 OS=Homo sapiens
GN=ZMIZ2 PE=1 SV=2
Length = 920
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 30 YECHQKVCEDCASYSKLDENQDENTWRCSICRR 62
++C C D SY +L N + TWRC +C +
Sbjct: 614 HDCRHIQCFDLESYLQL--NCERGTWRCPVCNK 644
>sp|Q09922|YAKB_SCHPO Uncharacterized transcriptional regulatory protein C1F7.11c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC1F7.11c PE=4 SV=1
Length = 782
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 17/93 (18%)
Query: 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67
+R+ + C+KS P+ S + QK+ +D Y K E E+T K ++R
Sbjct: 68 SRIDTLQNCVKSVSPNHESLIVSSDDQKIIDDI--YEKFGEKPAEDT--------KDENR 117
Query: 68 AQPVLSQNSTDSLLDVPVLEALQRRHSDVKIGS 100
+QP+ D P LE + + +K+GS
Sbjct: 118 SQPIHDP-------DHPTLEDVAQMLGKLKVGS 143
>sp|Q8CIE2|ZMIZ2_MOUSE Zinc finger MIZ domain-containing protein 2 OS=Mus musculus
GN=Zmiz2 PE=2 SV=2
Length = 920
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 30 YECHQKVCEDCASYSKLDENQDENTWRCSICRR 62
++C C D SY +L N + TWRC +C +
Sbjct: 614 HDCRHIQCFDLESYLQL--NCERGTWRCPVCNK 644
>sp|Q75VX8|GAREL_HUMAN GRB2-associated and regulator of MAPK protein-like OS=Homo sapiens
GN=GAREML PE=2 SV=3
Length = 874
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 16 CLKSFKPDDYSRVCYECHQKVCEDCAS 42
C + F PD+YS E ++ EDCAS
Sbjct: 348 CRERFDPDEYSTAVREAPAELAEDCAS 374
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 12 NCRVCLKSFKPDDYSRV--CYECHQKVCED 39
NC VC++ +KP+D R+ C K C D
Sbjct: 266 NCAVCIEGYKPNDVVRILPCRHLFHKCCVD 295
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 2 KSDKPA-ARLGNCRVCLKSFKPDDYSRV--CYECHQKVCED 39
K DK + NC VC++ +KP+D R+ C K C D
Sbjct: 265 KGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVD 305
>sp|Q6P1E1|ZMIZ1_MOUSE Zinc finger MIZ domain-containing protein 1 OS=Mus musculus
GN=Zmiz1 PE=2 SV=1
Length = 1072
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 30 YECHQKVCEDCASYSKLDENQDENTWRCSICRR 62
++C C D SY +L N + TWRC +C +
Sbjct: 763 HDCKHVQCFDLESYLQL--NCERGTWRCPVCNK 793
>sp|Q84JA6|CESA4_ARATH Cellulose synthase A catalytic subunit 4 [UDP-forming]
OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1
Length = 1049
Score = 28.9 bits (63), Expect = 8.9, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 13 CRVCLKSFKPDDYSRV---CYECHQKVCEDCASYSKLDENQ 50
C+VC K DD + C+ C VC+ C Y + + N+
Sbjct: 23 CKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYEYERSNGNK 63
>sp|Q8VHQ7|SYTL4_RAT Synaptotagmin-like protein 4 OS=Rattus norvegicus GN=Sytl4 PE=1
SV=1
Length = 672
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 12/71 (16%)
Query: 26 SRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRAQPVLSQNSTDSLLDVPV 85
S C C+ VC +C L+ N +WRC +C ++++ L + + D D V
Sbjct: 77 SNTCVGCNHLVCRECRV---LESN---GSWRCKVCSKEIE------LKKATGDWFYDQKV 124
Query: 86 LEALQRRHSDV 96
R SD+
Sbjct: 125 NRFAYRTGSDI 135
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 2 KSDKPA-ARLGNCRVCLKSFKPDDYSRV--CYECHQKVCED 39
K DK + NC VC++ +KP+D R+ C K C D
Sbjct: 266 KGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVD 306
>sp|Q9ULJ6|ZMIZ1_HUMAN Zinc finger MIZ domain-containing protein 1 OS=Homo sapiens
GN=ZMIZ1 PE=1 SV=3
Length = 1067
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 30 YECHQKVCEDCASYSKLDENQDENTWRCSICRR 62
++C C D SY +L N + TWRC +C +
Sbjct: 756 HDCKHVQCFDLESYLQL--NCERGTWRCPVCNK 786
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,919,766
Number of Sequences: 539616
Number of extensions: 2054228
Number of successful extensions: 6257
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 6186
Number of HSP's gapped (non-prelim): 155
length of query: 135
length of database: 191,569,459
effective HSP length: 100
effective length of query: 35
effective length of database: 137,607,859
effective search space: 4816275065
effective search space used: 4816275065
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)